Query 009853
Match_columns 524
No_of_seqs 271 out of 1747
Neff 7.5
Searched_HMMs 46136
Date Thu Mar 28 18:07:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009853.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009853hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1047 Bifunctional leukotrie 100.0 2E-115 4E-120 897.6 35.7 491 4-522 5-613 (613)
2 TIGR02411 leuko_A4_hydro leuko 100.0 2E-107 4E-112 894.7 49.0 481 5-519 1-601 (601)
3 KOG1046 Puromycin-sensitive am 100.0 6.2E-58 1.3E-62 521.5 27.3 359 5-393 25-502 (882)
4 TIGR02412 pepN_strep_liv amino 100.0 2.3E-56 4.9E-61 508.5 29.5 327 14-377 13-452 (831)
5 PRK14015 pepN aminopeptidase N 100.0 1.3E-55 2.7E-60 499.1 33.1 327 12-377 16-458 (875)
6 TIGR02414 pepN_proteo aminopep 100.0 4.3E-53 9.4E-58 477.2 31.8 327 12-377 4-445 (863)
7 COG0308 PepN Aminopeptidase N 100.0 2E-51 4.4E-56 468.0 28.0 330 18-379 25-475 (859)
8 PF01433 Peptidase_M1: Peptida 100.0 2.5E-44 5.4E-49 378.8 16.7 266 10-306 1-390 (390)
9 PF09127 Leuk-A4-hydro_C: Leuk 100.0 6.7E-40 1.4E-44 296.3 13.5 137 379-519 1-143 (143)
10 KOG1932 TATA binding protein a 99.9 3.8E-21 8.2E-26 212.5 24.1 202 15-239 25-271 (1180)
11 PF13485 Peptidase_MA_2: Pepti 98.0 1.2E-05 2.6E-10 70.2 5.9 79 251-329 27-128 (128)
12 KOG1047 Bifunctional leukotrie 92.1 0.05 1.1E-06 58.5 0.4 34 252-285 291-331 (613)
13 COG3975 Predicted protease wit 89.5 3.2 7E-05 44.9 11.0 74 299-373 351-433 (558)
14 PF04450 BSP: Peptidase of pla 84.5 5.6 0.00012 38.3 8.7 102 246-362 94-204 (205)
15 PF10023 DUF2265: Predicted am 66.0 5.1 0.00011 41.3 3.0 41 239-280 156-197 (337)
16 PF10460 Peptidase_M30: Peptid 63.6 66 0.0014 33.8 10.6 114 247-367 138-285 (366)
17 COG4324 Predicted aminopeptida 44.7 14 0.00031 36.6 2.0 34 247-281 196-230 (376)
18 TIGR02411 leuko_A4_hydro leuko 34.1 51 0.0011 37.2 4.6 39 239-277 309-347 (601)
19 PF07607 DUF1570: Protein of u 33.9 35 0.00075 30.3 2.6 30 250-282 3-43 (128)
20 PF09836 DUF2063: Uncharacteri 32.2 26 0.00056 29.0 1.4 31 313-343 55-85 (94)
21 PF15641 Tox-MPTase5: Metallop 20.5 1.5E+02 0.0033 24.4 3.7 27 239-265 54-81 (109)
22 PF11266 DUF3066: Protein of u 20.2 1.2E+02 0.0027 28.5 3.6 32 245-278 123-154 (219)
No 1
>KOG1047 consensus Bifunctional leukotriene A4 hydrolase/aminopeptidase LTA4H [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Defense mechanisms; Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-115 Score=897.64 Aligned_cols=491 Identities=40% Similarity=0.667 Sum_probs=447.6
Q ss_pred CCCCCCCCCCCceEEEEEEEEEEecCCceEEEEEEEEEEec-CCCcEEEecCCCeEEEEEecCCCceeeEEeCCCCCCCC
Q 009853 4 IDPHSFTESTHPLTTHISLSLYFDFSSSTIHAAAILTLASP-HAGPLSLDTRSLTIHQVLDPQTLTPLPFTLSPTDDPIK 82 (524)
Q Consensus 4 ~D~~s~s~~~~v~~~hy~L~l~id~~~~~~~G~v~i~~~~~-~~~~i~Ld~~~L~I~~v~~~~~g~~~~~~~~~~~~~~~ 82 (524)
+||||+|||+++.+.|++|+|++||+.+.++|+|.+++++. +...|+||+++|+|.+|++ ++.+.+|.++.. +.+.
T Consensus 5 ~Dp~s~sn~~~~~~~H~~l~~~vdF~~~~i~G~a~l~l~~~~~~~~~~LDt~~l~i~~v~i--~~~~~~~~i~~~-~~~~ 81 (613)
T KOG1047|consen 5 RDPSSASNYRDVTVLHLALNLRVDFEKRGISGSALLTLRLLEDNLKLVLDTRDLSIRNVTI--NGEEPPFRIGFR-QPFL 81 (613)
T ss_pred CCcccccChhhhhhheeeeeEEEecccceecceEEEEEEeccCCceeEeeecceeeEEeec--cCCCCCCccCcc-cCCC
Confidence 49999999999999999999999999999999999999974 4446999999999999999 566777877765 6677
Q ss_pred CceEEEEeC-------CceEEEEEEEeccCCCCCcccCCCccCCCcccEEEeccccCCcceecccCCCCCCceeEEEEEE
Q 009853 83 GRHLIVTLS-------DHSSVLIVFSTSPSSSALQWLSPPQTFNKLHPFVYTQCQAIHARSVFPCQDTPAARVRYKALIN 155 (524)
Q Consensus 83 g~~L~I~l~-------~~~~v~i~Y~~~~~~~~l~~l~~~qt~g~~~p~l~Tq~ep~~AR~~fPC~D~P~~Katf~~~I~ 155 (524)
|+.+.+.++ +...|.|.|+|+++++|+|||+|+||.||++||+|||||+||||++|||||+|++|.||++.|.
T Consensus 82 g~~~~~~l~~~~~~a~~~~~l~i~y~Ts~~atalqwL~peQT~gk~~PylfsQCQAIhaRsi~PC~DTPavK~ty~a~v~ 161 (613)
T KOG1047|consen 82 GSGQKLVLPAPSSKAGERLQLLIWYETSPSATALQWLNPEQTSGKKHPYLFSQCQAIHARSIFPCQDTPAVKSTYTAEVE 161 (613)
T ss_pred CCceEEEeccccccccCceEEEEEEeccCCcceeEEeccccccCCCCCchHHHHHHhHHheeccccCCCcceeEEEEEEE
Confidence 766655554 3578999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCcccccccccCCCCCCCCCccccCCccccccccccccCCCeEEEEEeccCCCCceeeeeeeccceeeecCCeeEEE
Q 009853 156 IPRQLSAVMAARHEDRRPPVAGETKAFGSSCFDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVY 235 (524)
Q Consensus 156 ~p~~~~alsn~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~t~pipsYLiA~avG~l~~~~~g~~~~V~ 235 (524)
+|.+++|+||+...+++ +...|..+++|+|.+|||+||+||++|+++++++|+|++||
T Consensus 162 vp~~l~a~mSai~~~~~----------------------~~~~~~~~f~f~q~~pIP~YLiai~~G~L~s~eIgpRs~Vw 219 (613)
T KOG1047|consen 162 VPMGLTALMSAIPAGEK----------------------PGSNGRAIFRFKQEVPIPSYLIAIAVGDLESREIGPRSRVW 219 (613)
T ss_pred cCCcceeeeeccccccC----------------------CCCCCcceEEEEeccCchhhhHHHhhccccccccCCcccee
Confidence 99999999999764322 01456789999999999999999999999999999999999
Q ss_pred ecC-----------------------------------------------------------------------------
Q 009853 236 AES----------------------------------------------------------------------------- 238 (524)
Q Consensus 236 ~~p----------------------------------------------------------------------------- 238 (524)
+||
T Consensus 220 aEp~~~~a~~~ef~~~~e~~L~~Ae~l~GpY~WgryDllvlPpSFP~gGMENPcltF~TpTllaGDrsl~~vIaHEIAHS 299 (613)
T KOG1047|consen 220 AEPCLLDACQEEFAGETEDFLKAAEKLFGPYVWGRYDLLVLPPSFPFGGMENPCLTFVTPTLLAGDRSLVDVIAHEIAHS 299 (613)
T ss_pred cchhhhHHHHHHHHhhhHHHHHHHHHHcCCcccccceEEEecCCCCcccccCcceeeecchhhcCCcchhhHHHHHhhhh
Confidence 999
Q ss_pred ------------------CceehhHHHHHHHHHhHHHHHHHhhcchhHHHHHHHhhhcccccCcccccCCCCCcCCCCCC
Q 009853 239 ------------------GFTTYAERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFKDNLECTKLKTNQEGLDPDDVYSQ 300 (524)
Q Consensus 239 ------------------G~~ty~E~~i~~~i~~~e~ah~w~g~~W~~L~Eg~a~~~~~~~~~~L~~~~~~~~pd~~fs~ 300 (524)
|||||.||+|+++++|++.+|+.+..||.+|...+..+++++++++|+.++++.|||++||+
T Consensus 300 WtGNlVTN~sWehfWLNEGfTvylErrI~g~~~g~~~~~f~a~~gw~~L~~~~d~~g~~~~~tkLv~kl~~~dPDdafs~ 379 (613)
T KOG1047|consen 300 WTGNLVTNASWEHFWLNEGFTVYLERRIVGRLYGEAYRQFEALIGWRELRPSMDLFGETSEFTKLVVKLENVDPDDAFSQ 379 (613)
T ss_pred hcccccccCccchhhhcccchhhhhhhhhhhhcchhHHHHHHhcChhhhhhHHHhcCCCcccchhhhhccCCChHHhhhc
Confidence 78888888888888887788887778888888888888888888999999999999999999
Q ss_pred CccchhHHHHHHHHHhhCh-hHHHHHHHHHHHHhCCCCCCHHHHHHHHHhhCCC-----CchhHHHHHhhcCCCCCCccc
Q 009853 301 VPYEKGFQFLWRIERQIGR-PAFDEFIKKYIATFKFKSIDTETFLNFLKENVPG-----IEKQIDLELWTEGTGIPPDAY 374 (524)
Q Consensus 301 i~Y~KGa~~L~mLe~~vG~-~~F~~~lr~Yl~~~~~~s~~t~df~~~l~~~~~~-----~~~~~~~~~W~~~~G~P~~~~ 374 (524)
+||+||++||++||+++|+ +.|+.|||.|+++|+|++|+++||+++|.+++++ +...++|+.|++++|+|+..+
T Consensus 380 VpYeKG~~ll~~Le~~lG~~~~Fd~FLr~Yv~kfa~ksI~t~dfld~Lye~fpe~kk~dil~~vd~~~Wl~~~G~Pp~~p 459 (613)
T KOG1047|consen 380 VPYEKGFALLFYLEQLLGDPTRFDPFLRAYVHKFAFKSILTQDFLDFLYEYFPELKKKDILDEVDWDLWLNSPGMPPPKP 459 (613)
T ss_pred CchhhhhHHHHHHHHHhCChhhHHHHHHHHHHHhccceecHHHHHHHHHHhCcchhhhhhhccccHHHHhcCCCCCCCCC
Confidence 9999999999999999996 4799999999999999999999999999999987 335678999999999999999
Q ss_pred ccCCcchHHHHHHHHHhhc-----C--CCCCccccccchhHHHHHHHHhCCC--CCcHHHHHHHhhhcCCCCCCChhhhH
Q 009853 375 EPVSSLYSKIVSLANEFKL-----G--KIPKEDEVADWQGQEWELYLENLPK--SAEASQVLALDERYRLSESKDYEVKV 445 (524)
Q Consensus 375 ~~~~~~~~~~~~l~~~~~~-----~--~~~~~~~~~~~~~~~~~~fl~~l~~--~~~~~~~~~ld~~y~~~~~~n~ei~~ 445 (524)
.+++++++.|++|+++|.. . ..+++.|++.|+++|+++||++|++ ++++.++++|+++|+|.+++|+||++
T Consensus 460 ~~~~sL~~~~~~La~~W~~~~~~~~~~~~~~a~d~~~~~~~Ql~lfL~~l~q~~~lp~~~~~aL~~~Y~l~~skNAEvr~ 539 (613)
T KOG1047|consen 460 NFDSSLARPVEALAQKWTAVEELDDAASEFSAEDIEKWSPDQLVLFLDKLLQSKPLPPGTVKALQDTYSLLQSKNAEVRF 539 (613)
T ss_pred CccchHHHHHHHHHHHHhhcccccccccccchhhHHhcChHhHHHHHHHHHhcCCCChHHHHHHHHHhhhhhccchHHHH
Confidence 9999999999999999986 1 2446788999999999999999994 68999999999999999999999999
Q ss_pred HHHHHHHhCCCcchHHHHHHHHHhcCCcccchHHHHHHhcCCCCchhHHHHHHHHHHhccccChHHHHHHHHHhhhc
Q 009853 446 AFLQLAISSSCKDYYGEVEKTLKEVGRMKYLRPLYIALVQGAGKDEEKILAKRVFAEARDSYHPIAQGVVESIFAKH 522 (524)
Q Consensus 446 ~w~~~~~~~~~~~~~~~~~~~l~~~grmk~~~plyr~L~~~~~~~~~~~~A~~~f~~~~~~yhpi~~~~v~~~l~~~ 522 (524)
||++|+|+++|++.|+.+++||.+||||||+||+||+|+.+. +.+++|+++|+++|++|||||+++|+|||+++
T Consensus 540 rw~~L~vksk~~~~~~~v~~fl~~~grmkf~rPlyr~L~~~~---~~~~~A~~~F~~~k~qmhpi~~~~V~~~L~~~ 613 (613)
T KOG1047|consen 540 RWLQLIVKSKWQEAYKKVLEFLGEQGRMKFTRPLYRDLAGGE---AAKQLAIETFAKTKSQMHPICANVVQKDLGLY 613 (613)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHhccceeeehHHHHHhhcch---HHHHHHHHHHHHhHhhhCHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999874 68999999999999999999999999999864
No 2
>TIGR02411 leuko_A4_hydro leukotriene A-4 hydrolase/aminopeptidase. Members of this family represent a distinctive subset within the zinc metallopeptidase family M1 (pfam01433). The majority of the members of pfam01433 are aminopeptidases, but the sequences in this family for which the function is known are leukotriene A-4 hydrolase. A dual epoxide hydrolase and aminopeptidase activity at the same active site is indicated. The physiological substrate for aminopeptidase activity is not known.
Probab=100.00 E-value=1.8e-107 Score=894.74 Aligned_cols=481 Identities=34% Similarity=0.558 Sum_probs=423.8
Q ss_pred CCCCCCCCCCceEEEEEEEEEEecCCceEEEEEEEEEEec-C-CCcEEEecCCCeEEEEEecCCCceeeEEeCCCCCCCC
Q 009853 5 DPHSFTESTHPLTTHISLSLYFDFSSSTIHAAAILTLASP-H-AGPLSLDTRSLTIHQVLDPQTLTPLPFTLSPTDDPIK 82 (524)
Q Consensus 5 D~~s~s~~~~v~~~hy~L~l~id~~~~~~~G~v~i~~~~~-~-~~~i~Ld~~~L~I~~v~~~~~g~~~~~~~~~~~~~~~ 82 (524)
||||+|||++++|.||+|+|++||++++|+|+|+|++++. + .+.|+||+++|+|++|.+ +|++++|++.+. +...
T Consensus 1 d~~s~sn~~~~~~~hy~L~L~vd~~~~~~~G~v~i~l~~~~~~~~~i~Ld~~~L~I~~V~v--~g~~~~~~~~~~-~~~~ 77 (601)
T TIGR02411 1 DPSSLSNYKDFRTSHTDLNLSVDFTKRKLSGSVTFTLQSLTDNLNSLVLDTSYLDIQKVTI--NGLPADFAIGER-KEPL 77 (601)
T ss_pred CCccccCCCCcEEEEEEEEEEEeecCCEEEEEEEEEEEECCCCCcEEEEECCCCEEEEEEE--CCcccceEeccc-cCCC
Confidence 8999999999999999999999999999999999999984 3 478999999999999998 677788888754 4457
Q ss_pred CceEEEEeC-----C-ceEEEEEEEeccCCCCCcccCCCccCCCcccEEEeccccCCcceecccCCCCCCceeEEEEEEe
Q 009853 83 GRHLIVTLS-----D-HSSVLIVFSTSPSSSALQWLSPPQTFNKLHPFVYTQCQAIHARSVFPCQDTPAARVRYKALINI 156 (524)
Q Consensus 83 g~~L~I~l~-----~-~~~v~i~Y~~~~~~~~l~~l~~~qt~g~~~p~l~Tq~ep~~AR~~fPC~D~P~~Katf~~~I~~ 156 (524)
|+.|+|.++ + .++|+|.|++++++.|++|+.++||.|+++||++|||||++||+||||||+|++|+||+++|++
T Consensus 78 g~~L~I~l~~~l~~g~~~~l~I~Y~~~~~~~gl~~~~~~~t~g~~~py~~Tq~qp~~AR~~fPC~D~P~~Katf~~~I~~ 157 (601)
T TIGR02411 78 GSPLTISLPIATSKNKELVLNISFSTTPKCTALQWLTPEQTSGKKHPYLFSQCQAIHARSVIPCQDTPSVKSTYTAEVES 157 (601)
T ss_pred CCeEEEEeCCccCCCceEEEEEEEeecCCCceeEEecccccCCCCCCEEEECCcccchheeeeecCCcccceEEEEEEee
Confidence 899999997 2 5799999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccccccCCCCCCCCCccccCCccccccccccccCCCeEEEEEeccCCCCceeeeeeeccceeeecCCeeEEEe
Q 009853 157 PRQLSAVMAARHEDRRPPVAGETKAFGSSCFDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYA 236 (524)
Q Consensus 157 p~~~~alsn~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~t~pipsYLiA~avG~l~~~~~g~~~~V~~ 236 (524)
| ++|+|||.+... . .++..+++|++++|||+||+||+||+|+.++.|++++||+
T Consensus 158 P--~~av~sg~~~~~------~------------------~~~~~~~~F~~t~pmptYLia~avG~~~~~~~g~~~~v~~ 211 (601)
T TIGR02411 158 P--LPVLMSGIPDGE------T------------------SNDPGKYLFKQKVPIPAYLIALASGDLASAPIGPRSSVYS 211 (601)
T ss_pred C--cceeccCCcccc------c------------------cCCCceEEEEeCCCcchhhheeeeccceecccCCceEEEc
Confidence 9 999999864321 1 1234478999999999999999999999999999999999
Q ss_pred cC--------------------------------------------------CceehhHHHHH------HHHHhHHHHHH
Q 009853 237 ES--------------------------------------------------GFTTYAERRIV------EVVQGEDRAVL 260 (524)
Q Consensus 237 ~p--------------------------------------------------G~~ty~E~~i~------~~i~~~e~ah~ 260 (524)
+| | ++|.+..++ ..++.||+|||
T Consensus 212 ~p~~~~~~~~~~~~~~~~~l~~~e~~~~pYp~~k~d~vvlpp~f~~GgMEN~~-ltf~~~~ll~~d~s~~~viaHElAHq 290 (601)
T TIGR02411 212 EPEQLEKCQYEFEHDTENFIKTAEDLIFPYEWGQYDLLVLPPSFPYGGMENPN-LTFATPTLIAGDRSNVDVIAHELAHS 290 (601)
T ss_pred cchhHHHHHHHHHHhHHHHHHHHHHhCCCCcCccceEEEecCccccccccccc-ceeeccccccCChhhhhhHHHHHHhh
Confidence 99 4 345543322 24566699999
Q ss_pred Hhhc-----chhH--HHHHHHhhhcccccC---------------------------------cccccCCCCCcCCCCCC
Q 009853 261 NIGI-----GWRG--LNEEMERFKDNLECT---------------------------------KLKTNQEGLDPDDVYSQ 300 (524)
Q Consensus 261 w~g~-----~W~~--L~Eg~a~~~~~~~~~---------------------------------~L~~~~~~~~pd~~fs~ 300 (524)
|||+ +|.+ ||||||+|++..... .+..+..+.+|+++|+.
T Consensus 291 WfGNlVT~~~W~d~WLnEGfaty~e~~~~~~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dp~~~f~~ 370 (601)
T TIGR02411 291 WSGNLVTNCSWEHFWLNEGWTVYLERRIVGRLYGEKTRHFSALIGWGELQESVKTLGEDPEYTKLVVDLKDNDPDDAFSS 370 (601)
T ss_pred ccCceeecCCchHHHHHhhHHHHHHHHHHHHhcCcHHHHHHHHHhHHHHHHHHHhhcCCCCCCcccccCCCCChhhhccc
Confidence 9993 6777 999999998752111 11112234489999999
Q ss_pred CccchhHHHHHHHHHhhC-hhHHHHHHHHHHHHhCCCCCCHHHHHHHHHhhCCC----Cchh-HHHHHhhcCCCCCCccc
Q 009853 301 VPYEKGFQFLWRIERQIG-RPAFDEFIKKYIATFKFKSIDTETFLNFLKENVPG----IEKQ-IDLELWTEGTGIPPDAY 374 (524)
Q Consensus 301 i~Y~KGa~~L~mLe~~vG-~~~F~~~lr~Yl~~~~~~s~~t~df~~~l~~~~~~----~~~~-~~~~~W~~~~G~P~~~~ 374 (524)
++|+||+++|+|||.+|| ++.|+++||.|+++|+|++++++||+++|.+++.+ .++. .+|+.|++++|+|++++
T Consensus 371 i~Y~KGa~~L~mL~~~lG~~~~F~~~lr~Yl~~~~~~s~~t~df~~~l~~~~~~~~~~~~l~~~~~~~Wl~~~G~P~~~~ 450 (601)
T TIGR02411 371 VPYEKGFNFLFYLEQLLGGPAVFDPFLKHYFKKFAYKSLDTYQFKDALYEYFKDTGKVDKLNAVDWDTWLYSPGLPPVKP 450 (601)
T ss_pred cchhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhhccccchhhhhhHHHHhcCCCCCCcCC
Confidence 999999999999999999 89999999999999999999999999999986532 2333 45999999999999999
Q ss_pred ccCCcchHHHHHHHHHhhcCC----CC-CccccccchhHHHHHHHHhCCC-----CCcHHHHHHHhhhcCCCCCCChhhh
Q 009853 375 EPVSSLYSKIVSLANEFKLGK----IP-KEDEVADWQGQEWELYLENLPK-----SAEASQVLALDERYRLSESKDYEVK 444 (524)
Q Consensus 375 ~~~~~~~~~~~~l~~~~~~~~----~~-~~~~~~~~~~~~~~~fl~~l~~-----~~~~~~~~~ld~~y~~~~~~n~ei~ 444 (524)
++++++.+.|..|+++|..+. .+ +..++++|+++|+++||+.|++ +++++++++||++|+|+.++|+||+
T Consensus 451 ~~~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~~~~~~~q~~~fl~~l~~~~~~~~l~~~~~~~l~~~y~~~~~~n~ei~ 530 (601)
T TIGR02411 451 NFDTTLADECYALASRWVDAAKDDLSSFNAKDIKDFSSHQLVLFLETLTERKGIVSLPEGHIKRMGDIYNFAASKNAEVR 530 (601)
T ss_pred CCCchHHHHHHHHHHHHHhcCCCCCCCcchhhhhhCCHHHHHHHHHHHHhhccCCCCCHHHHHHHHhhcCccCCCchhhh
Confidence 999999999999999998744 22 3478999999999999999995 4999999999999999999999999
Q ss_pred HHHHHHHHhCCCcchHHHHHHHHHhcCCcccchHHHHHHhcCCCCchhHHHHHHHHHHhccccChHHHHHHHHHh
Q 009853 445 VAFLQLAISSSCKDYYGEVEKTLKEVGRMKYLRPLYIALVQGAGKDEEKILAKRVFAEARDSYHPIAQGVVESIF 519 (524)
Q Consensus 445 ~~w~~~~~~~~~~~~~~~~~~~l~~~grmk~~~plyr~L~~~~~~~~~~~~A~~~f~~~~~~yhpi~~~~v~~~l 519 (524)
+||+++||+++|+++++.+++||+++|||||+|||||+|.++. ++++|+++|+++|++|||||++||+|||
T Consensus 531 ~~w~~~~~~~~~~~~~~~~~~~l~~~gr~k~~~p~y~~l~~~~----~~~~a~~~f~~~~~~yh~~~~~~v~~~l 601 (601)
T TIGR02411 531 FRWNRLAIQAKLEDEYPLIAEWLGTVGRMKFVRPGYRLLNAFV----DKDFAIRTFEKFKDSYHPICAMLVEKDL 601 (601)
T ss_pred HHHHHHHHhcCCchhHHHHHHHHHhcCCcEEehHHHHHHHhcc----CHHHHHHHHHHHhhccCHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999972 5899999999999999999999999997
No 3
>KOG1046 consensus Puromycin-sensitive aminopeptidase and related aminopeptidases [Amino acid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.2e-58 Score=521.49 Aligned_cols=359 Identities=22% Similarity=0.348 Sum_probs=287.5
Q ss_pred CCCCCCCCCCceEEEEEEEEEEecCCceEEEEEEEEEEec-CCCcEEEecCCCeEEEEEecCC-Cce----eeEEeCCCC
Q 009853 5 DPHSFTESTHPLTTHISLSLYFDFSSSTIHAAAILTLASP-HAGPLSLDTRSLTIHQVLDPQT-LTP----LPFTLSPTD 78 (524)
Q Consensus 5 D~~s~s~~~~v~~~hy~L~l~id~~~~~~~G~v~i~~~~~-~~~~i~Ld~~~L~I~~v~~~~~-g~~----~~~~~~~~~ 78 (524)
+|..+++|..+.|.||+|.|.+++....|.|+|.|.+++. .++.|+||+.+|.|.++.+... +.. ........
T Consensus 25 ~~~~~rLP~~v~P~~Y~l~l~~~l~~~~f~G~v~I~l~v~~~t~~i~Lh~~~l~i~~~~~~~~~~~~~~~~~~~~~~~~- 103 (882)
T KOG1046|consen 25 FPNEYRLPTNVVPLHYDLTLKPDLEEFTFTGSVKISLEVSEATRFIVLHAKDLKITSASLVSRPSSGSVQLEVSVEEKE- 103 (882)
T ss_pred ccccccCCCCCCCceeEEEEecCCcCCcceeEEEEEEEEecccCEEEEEhhhccceeEEEEecCCCCcccccccccccc-
Confidence 3467899999999999999999999999999999999995 6889999999999999988421 111 11111110
Q ss_pred CCCCCceEEEEeC------CceEEEEEEEeccCCCCCcccCCCcc--CCCcccEEEeccccCCcceecccCCCCCCceeE
Q 009853 79 DPIKGRHLIVTLS------DHSSVLIVFSTSPSSSALQWLSPPQT--FNKLHPFVYTQCQAIHARSVFPCQDTPAARVRY 150 (524)
Q Consensus 79 ~~~~g~~L~I~l~------~~~~v~i~Y~~~~~~~~l~~l~~~qt--~g~~~p~l~Tq~ep~~AR~~fPC~D~P~~Katf 150 (524)
.. ..+.+.++ ..+.++|.|.+..+.+..++.....+ .+..+....|||||++||++|||||+|++||||
T Consensus 104 --~~-~~l~~~~~~~l~~~~~y~L~i~f~g~l~~~~~G~y~s~y~~~~~~~~~~~~Tqfept~AR~~FPCfDeP~~KAtF 180 (882)
T KOG1046|consen 104 --QE-ETLVFPLNETLLAGSSYTLTIEFTGKLNDSSEGFYRSSYTDSEGSEKSIAATQFEPTDARRAFPCFDEPAFKATF 180 (882)
T ss_pred --cc-eEEEEEcccccccCCeEEEEEEEeEeecCCcceeeeecccCCCCceEEEEEeccCccchhhcCCCCCcccccCce
Confidence 01 45666553 24789999999766443333332222 233456788999999999999999999999999
Q ss_pred EEEEEecCCCcccccccccCCCCCCCCCccccCCccccccccccccCCCeEEEEEeccCCCCceeeeeeeccceeeec--
Q 009853 151 KALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSCFDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREV-- 228 (524)
Q Consensus 151 ~~~I~~p~~~~alsn~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~t~pipsYLiA~avG~l~~~~~-- 228 (524)
+++|.+|++++|||||...++ . +..+++++..|+.|||||+||+||+||+|++++.
T Consensus 181 ~Itl~hp~~~~aLSNm~v~~~-------~---------------~~~~~~~~~~F~~Tp~MstYLvAf~V~~f~~~e~~~ 238 (882)
T KOG1046|consen 181 TITLVHPKGYTALSNMPVIKE-------E---------------PVDDGWKTTTFEKTPKMSTYLVAFAVGDFVYVETIT 238 (882)
T ss_pred EEEEEecCCceEeecCccccc-------c---------------cccCCeeEEEEEecCCCchhhheeeeeccccceeec
Confidence 999999999999999854321 1 0145589999999999999999999999999883
Q ss_pred --CCeeEEEecC-------------------------------------------------CceehhHHHH---------
Q 009853 229 --GPRTRVYAES-------------------------------------------------GFTTYAERRI--------- 248 (524)
Q Consensus 229 --g~~~~V~~~p-------------------------------------------------G~~ty~E~~i--------- 248 (524)
|+++|||+.| |++||+|..+
T Consensus 239 ~~~v~vrv~a~p~~~~~~~~al~~~~~~L~~~e~~f~i~yPLpK~D~iavPdf~~GAMENwGLvtyre~~lL~~~~~ss~ 318 (882)
T KOG1046|consen 239 KSGVPVRVYARPEKINQGQFALEVATKVLEFYEDYFGIPYPLPKLDLVAVPDFSAGAMENWGLVTYRETALLYDPQTSSS 318 (882)
T ss_pred CCCceEEEEeChHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCccccEEecCCccccchhcCcceeeeehhhccCCCcCcH
Confidence 6899999999 9999999754
Q ss_pred -----HHHHHhHHHHHHHhhc-----chhH--HHHHHHhhhcccccCccccc------------------------C---
Q 009853 249 -----VEVVQGEDRAVLNIGI-----GWRG--LNEEMERFKDNLECTKLKTN------------------------Q--- 289 (524)
Q Consensus 249 -----~~~i~~~e~ah~w~g~-----~W~~--L~Eg~a~~~~~~~~~~L~~~------------------------~--- 289 (524)
++.+++||+||||||+ ||.+ ||||||+|++...++.+.|. +
T Consensus 319 ~~k~~va~vIaHElAHQWFGNLVTm~wW~dLWLnEGfAt~~~~~~v~~~~p~~~~~~~~~~~~l~~~l~~D~l~~shpi~ 398 (882)
T KOG1046|consen 319 SNKQRVAEVIAHELAHQWFGNLVTMKWWNDLWLNEGFATYVEYLAVDHLFPEWDIWEQFLLENLERVLSLDALASSHPIS 398 (882)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccHhhhhhhhhcccHHHHHHHHhhccCCcchhhHHHHHHHHHHHHhhhhcccccCCee
Confidence 3456667999999993 6666 99999999988765544431 1
Q ss_pred ----CCCCcCCCCCCCccchhHHHHHHHHHhhChhHHHHHHHHHHHHhCCCCCCHHHHHHHHHhhCCCCchhHHHHHhhc
Q 009853 290 ----EGLDPDDVYSQVPYEKGFQFLWRIERQIGRPAFDEFIKKYIATFKFKSIDTETFLNFLKENVPGIEKQIDLELWTE 365 (524)
Q Consensus 290 ----~~~~pd~~fs~i~Y~KGa~~L~mLe~~vG~~~F~~~lr~Yl~~~~~~s~~t~df~~~l~~~~~~~~~~~~~~~W~~ 365 (524)
+..++++.|+.|.|.||+++||||+.+||++.|+++|+.|+.+|+|+|++++|||+.|.. ..+.+++.+|+.|+.
T Consensus 399 ~~v~~~~ei~e~fd~i~Y~KGasvlRML~~~lGe~~F~~gi~~yL~~~~y~na~~~DLw~~l~~-~~~~~v~~~M~~Wt~ 477 (882)
T KOG1046|consen 399 VPVESPSEIDEIFDEISYQKGASVLRMLESLLGEEVFRKGLRSYLKKHQYSNAKTEDLWDALEE-GSGLDVSELMDTWTK 477 (882)
T ss_pred eecCCcchhhhhhhhhhhhHHHHHHHHHHHHHCHHHHHHHHHHHHHHhccCCCCchhHHHHHhc-cCCCCHHHHHhhhhc
Confidence 122345689999999999999999999999999999999999999999999999999995 568889999999999
Q ss_pred CCCCCCcccccCCcchHHHHHHHHHhhc
Q 009853 366 GTGIPPDAYEPVSSLYSKIVSLANEFKL 393 (524)
Q Consensus 366 ~~G~P~~~~~~~~~~~~~~~~l~~~~~~ 393 (524)
|+|||+++|+.+.+ .+...|+||+.
T Consensus 478 Q~G~Pvv~V~~~~~---~~~l~Q~rf~~ 502 (882)
T KOG1046|consen 478 QMGYPVVTVERNGD---SLTLTQERFLS 502 (882)
T ss_pred CCCCceEEEEecCC---EEEEehhhhcc
Confidence 99999999987765 34445667754
No 4
>TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type. This family is a subset of the members of the zinc metallopeptidase family M1 (pfam01433), with a single member characterized in Streptomyces lividans 66 and designated aminopeptidase N. The spectrum of activity may differ somewhat from the aminopeptidase N clade of E. coli and most other Proteobacteria, well separated phylogenetically within the M1 family. The M1 family also includes leukotriene A-4 hydrolase/aminopeptidase (with a bifunctional active site).
Probab=100.00 E-value=2.3e-56 Score=508.55 Aligned_cols=327 Identities=19% Similarity=0.249 Sum_probs=260.0
Q ss_pred CceEEEEEEEEEEecCCc--eEEEEEEEEEEec-CCCcEEEecCCCeEEEEEecCCCc-eeeEEeCCCCCCCCCceEEEE
Q 009853 14 HPLTTHISLSLYFDFSSS--TIHAAAILTLASP-HAGPLSLDTRSLTIHQVLDPQTLT-PLPFTLSPTDDPIKGRHLIVT 89 (524)
Q Consensus 14 ~v~~~hy~L~l~id~~~~--~~~G~v~i~~~~~-~~~~i~Ld~~~L~I~~v~~~~~g~-~~~~~~~~~~~~~~g~~L~I~ 89 (524)
.+.+.||+|+|+++.+.. .+.|+++|++++. +.+.|.||+.+++|++|.+ +|+ ++.+.. .|..+.+.
T Consensus 13 ~~~~~~Y~l~l~l~~~~~~~~~~~~~~i~~~~~~~~~~l~LD~~~l~I~~v~v--ng~~~~~~~~-------~~~~i~l~ 83 (831)
T TIGR02412 13 LITVEHYEIALDLTGADEFFATRCVSTNTVRLSEPGADTFLDLLAAQIESVTL--NGILDVAPVY-------DGSRIPLP 83 (831)
T ss_pred hccceeEEEEEEccCCccccccceEEEEEEEEcCCCCcEEEEccCCEEEEEEE--CCcccCcccc-------CCCEEEcc
Confidence 578999999999986554 5589899988884 5789999999999999999 564 222222 23344332
Q ss_pred -eC-CceEEEEEEEeccC--CCCCc-ccCCCccCCCcccEEEeccccCCcceecccCCCCCCceeEEEEEEecCCCcccc
Q 009853 90 -LS-DHSSVLIVFSTSPS--SSALQ-WLSPPQTFNKLHPFVYTQCQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVM 164 (524)
Q Consensus 90 -l~-~~~~v~i~Y~~~~~--~~~l~-~l~~~qt~g~~~p~l~Tq~ep~~AR~~fPC~D~P~~Katf~~~I~~p~~~~als 164 (524)
++ +...|+|.|.+... ..|+. |..+. +| ++|++|||||.+||+||||||+|++||||+++|++|++++|+|
T Consensus 84 ~l~~g~~~l~i~~~~~~~~~~~Gl~~~~~~~--~g--~~~~~Tq~ep~~Ar~~fPcfDeP~~KAtf~ltit~p~~~~v~s 159 (831)
T TIGR02412 84 GLLTGENTLRVEATRAYTNTGEGLHRFVDPV--DG--EVYLYTQFEPADARRVFAVFDQPDLKANFKFSVKAPEDWTVIS 159 (831)
T ss_pred CCCCCceEEEEEEEEEecCCCceEEEEEeCC--CC--eEEEEECCCCcCceeeEecCCCCCCceeEEEEEEECCCceEEC
Confidence 22 35678888777653 34553 65542 23 4899999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCccccCCccccccccccccCCCeEEEEEeccCCCCceeeeeeeccceeeec---CCeeEEEecC---
Q 009853 165 AARHEDRRPPVAGETKAFGSSCFDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREV---GPRTRVYAES--- 238 (524)
Q Consensus 165 n~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~t~pipsYLiA~avG~l~~~~~---g~~~~V~~~p--- 238 (524)
||...+. . ..++.++++|++++||||||+||+||+|+..+. |+++++|++|
T Consensus 160 Ng~~~~~------~-----------------~~~~~~~~~F~~t~pmstYL~a~~vG~f~~~~~~~~gvpi~v~~~~~~~ 216 (831)
T TIGR02412 160 NSRETDV------T-----------------PEPADRRWEFPETPKLSTYLTAVAAGPYHSVQDESRSYPLGIYARRSLA 216 (831)
T ss_pred CCccccc------c-----------------ccCCCeEEEecCCCCcccceEEEEEeceEEEeecCCCEEEEEEECcchh
Confidence 9964321 1 124466899999999999999999999998773 6889999988
Q ss_pred ------------------------------------------------CceehhHHHH------------HHHHHhHHHH
Q 009853 239 ------------------------------------------------GFTTYAERRI------------VEVVQGEDRA 258 (524)
Q Consensus 239 ------------------------------------------------G~~ty~E~~i------------~~~i~~~e~a 258 (524)
|+++|+|..+ +..++.||+|
T Consensus 217 ~~~~~~~al~~~~~~l~~~e~~fg~pYP~~k~d~V~vP~f~~GaMEn~Glit~~e~~l~~~~~~~~~~~~~~~viaHElA 296 (831)
T TIGR02412 217 QYLDADAIFTITRQGLAFFHRKFGYPYPFKKYDQIFVPEFNAGAMENAGCVTFAENFLHRAEATRAEKENRAGVILHEMA 296 (831)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhCCCCCcccCCEEEcCCCCCCcccccceeeechhhccCCcCCHHHHHHHHHHHHHHHH
Confidence 8999987633 2345667999
Q ss_pred HHHhhc-----chhH--HHHHHHhhhcccccCcccc------------------------cCC----CCCc---CCCCCC
Q 009853 259 VLNIGI-----GWRG--LNEEMERFKDNLECTKLKT------------------------NQE----GLDP---DDVYSQ 300 (524)
Q Consensus 259 h~w~g~-----~W~~--L~Eg~a~~~~~~~~~~L~~------------------------~~~----~~~p---d~~fs~ 300 (524)
|||||+ ||.+ ||||||+|++.+..+.+.+ .+. ..++ ...|+.
T Consensus 297 HqWFGnlVT~~wW~dlWLnEGFAty~e~~~~~~~~~~~~~~~~f~~~~~~~a~~~D~~~~t~Pi~~~~~~~~~~~~~fd~ 376 (831)
T TIGR02412 297 HMWFGDLVTMRWWNDLWLNESFAEYMGTLASAEATEYTDAWTTFAAQGKQWAYEADQLPTTHPIVADVADLADALSNFDG 376 (831)
T ss_pred HHHhCCEeccccccchhHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhcccCCCCCccCCCCHHHHHHhccC
Confidence 999993 6666 9999999998643322211 010 1122 357999
Q ss_pred CccchhHHHHHHHHHhhChhHHHHHHHHHHHHhCCCCCCHHHHHHHHHhhCCCCchhHHHHHhhcCCCCCCcccccC
Q 009853 301 VPYEKGFQFLWRIERQIGRPAFDEFIKKYIATFKFKSIDTETFLNFLKENVPGIEKQIDLELWTEGTGIPPDAYEPV 377 (524)
Q Consensus 301 i~Y~KGa~~L~mLe~~vG~~~F~~~lr~Yl~~~~~~s~~t~df~~~l~~~~~~~~~~~~~~~W~~~~G~P~~~~~~~ 377 (524)
|+|.||+++|+||+.+||+++|+++||.|+++|+|++++++|||+.|++ .+|.+++.+|++|++++|+|+++++.+
T Consensus 377 isY~KGa~vL~mL~~~lGee~F~~glr~Yl~~~~~~nat~~Dl~~~l~~-~sg~dl~~~~~~W~~~~G~P~l~v~~~ 452 (831)
T TIGR02412 377 ITYAKGASVLKQLVAWVGEEAFFAGVNAYFKRHAFGNATLDDLIDSLAK-ASGRDLSAWSDAWLETAGVNTLTPEIT 452 (831)
T ss_pred ccchhHHHHHHHHHHHHCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHH-HhCCCHHHHHHHHHcCCCCceEEEEEE
Confidence 9999999999999999999999999999999999999999999999998 578999999999999999999987653
No 5
>PRK14015 pepN aminopeptidase N; Provisional
Probab=100.00 E-value=1.3e-55 Score=499.08 Aligned_cols=327 Identities=21% Similarity=0.331 Sum_probs=267.1
Q ss_pred CCCceEEEEEEEEEEecCCceEEEEEEEEEEe--cCCCcEEEecCCCeEEEEEecCCCcee---eEEeCCCCCCCCCceE
Q 009853 12 STHPLTTHISLSLYFDFSSSTIHAAAILTLAS--PHAGPLSLDTRSLTIHQVLDPQTLTPL---PFTLSPTDDPIKGRHL 86 (524)
Q Consensus 12 ~~~v~~~hy~L~l~id~~~~~~~G~v~i~~~~--~~~~~i~Ld~~~L~I~~v~~~~~g~~~---~~~~~~~~~~~~g~~L 86 (524)
|..+.+.||+|+|++|++...++|+++|+... .+.+.|+||+.+|+|++|.+ +|+++ .|.++ |+.|
T Consensus 16 ~~~~~V~h~dL~l~ld~~~~~v~g~~~i~~~~~~~~~~~l~LD~~~L~I~sV~v--~G~~~~~~~~~~~-------~~~L 86 (875)
T PRK14015 16 PPDYLIDTVDLDFDLDPDKTRVTARLQVRRNPDAAHSAPLVLDGEDLELLSLAL--DGQPLAPSAYELD-------EEGL 86 (875)
T ss_pred CCCeEEEEEEEEEEEcCCCcEEEEEEEEEEccCCCCCceEEEEcCCCEEEEEEE--CCEEcCccceEEc-------CCEE
Confidence 56799999999999999999999999998876 34578999999999999998 67776 56654 5689
Q ss_pred EEEe-CCceEEEEEEEeccCC-CCCcccCCCccCCCcccEEEeccccCCcceecccCCCCCCceeEEEEEEecC-CC-cc
Q 009853 87 IVTL-SDHSSVLIVFSTSPSS-SALQWLSPPQTFNKLHPFVYTQCQAIHARSVFPCQDTPAARVRYKALINIPR-QL-SA 162 (524)
Q Consensus 87 ~I~l-~~~~~v~i~Y~~~~~~-~~l~~l~~~qt~g~~~p~l~Tq~ep~~AR~~fPC~D~P~~Katf~~~I~~p~-~~-~a 162 (524)
+|.. ++.++|+|.|++.|.. .++.|+... .+ +++|||||.+||+||||+|+|++||||+++|++|+ .| ++
T Consensus 87 ~I~~l~~~~~l~I~y~~~P~~n~~l~Gly~s--~~----~~~TQ~Ep~gAR~~fPc~D~P~~KAtf~itI~~p~~~~~~~ 160 (875)
T PRK14015 87 TIENLPDRFTLEIETEIDPEANTALEGLYRS--GG----MFCTQCEAEGFRRITYFLDRPDVLARYTVRIEADKAKYPVL 160 (875)
T ss_pred EEecCCccEEEEEEEEEecCCCCCceeeEEE--CC----EEEEeccccCcCCcccCCCCCCCCeeEEEEEEEccccCeEE
Confidence 9984 5668999999998764 445555542 22 78999999999999999999999999999999999 48 67
Q ss_pred cccccccCCCCCCCCCccccCCccccccccccccCCCeEEEEEeccCCCCceeeeeeeccceeeec--------CCeeEE
Q 009853 163 VMAARHEDRRPPVAGETKAFGSSCFDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREV--------GPRTRV 234 (524)
Q Consensus 163 lsn~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~t~pipsYLiA~avG~l~~~~~--------g~~~~V 234 (524)
+|||.+++.. + ..+|+++++|++++|||+||+||+||+|+..+. ++++++
T Consensus 161 lSNG~l~~~~-----~-----------------~~~g~~~~~w~~~~PmpsYL~Al~aGdf~~~~d~~~~~~g~~vpl~i 218 (875)
T PRK14015 161 LSNGNLVESG-----E-----------------LPDGRHWATWEDPFPKPSYLFALVAGDLDVLEDTFTTRSGREVALEI 218 (875)
T ss_pred ecCCccccce-----e-----------------ccCCeEEEEEEeCCCcccceEEEEEeCCEEEEEEeeccCCCeEEEEE
Confidence 9999755321 1 146788899999999999999999999998651 368899
Q ss_pred EecC-------------------------------------------------CceehhHHHH--------------HHH
Q 009853 235 YAES-------------------------------------------------GFTTYAERRI--------------VEV 251 (524)
Q Consensus 235 ~~~p-------------------------------------------------G~~ty~E~~i--------------~~~ 251 (524)
|++| |+++|.|..+ ++.
T Consensus 219 y~~p~~~~~~~~al~~~~~~L~~~E~~FG~pYP~~k~diVavp~f~~GaMEN~Gl~~f~~~~lL~~~~~~t~~~~~~i~~ 298 (875)
T PRK14015 219 YVEPGNLDKCDHAMDSLKKSMKWDEERFGLEYDLDIFMIVAVDDFNMGAMENKGLNIFNSKYVLADPETATDADYERIES 298 (875)
T ss_pred EEeCCcHHHHHHHHHHHHHHHHHHHHHhCCCCChhhhCEEeCCCCCCcccccccccccccceEecCcccCCHHHHHHHHH
Confidence 9999 7888877532 345
Q ss_pred HHhHHHHHHHhhc-----chhH--HHHHHHhhhcccccC-------------------ccc----ccCCCCC------cC
Q 009853 252 VQGEDRAVLNIGI-----GWRG--LNEEMERFKDNLECT-------------------KLK----TNQEGLD------PD 295 (524)
Q Consensus 252 i~~~e~ah~w~g~-----~W~~--L~Eg~a~~~~~~~~~-------------------~L~----~~~~~~~------pd 295 (524)
+++||++|||||+ +|++ ||||||+|++..... .+. +..++.. ++
T Consensus 299 vIaHElaHqWFGNlVT~~~W~dLWLnEGFAty~e~~~~~~~~~~~~~~~~~~~~l~~~~~~~D~~~~a~pi~p~~~~~i~ 378 (875)
T PRK14015 299 VIAHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSADLGSRAVKRIEDVRVLRAAQFAEDAGPMAHPVRPDSYIEIN 378 (875)
T ss_pred HHHHHHHHHHHhCcceecchhhhhhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhcccccccccCCCCCCcchhhHH
Confidence 6777999999993 6777 999999998532100 000 1111222 34
Q ss_pred CCCCCCccchhHHHHHHHHHhhChhHHHHHHHHHHHHhCCCCCCHHHHHHHHHhhCCCCchhHHHHHhhcCCCCCCcccc
Q 009853 296 DVYSQVPYEKGFQFLWRIERQIGRPAFDEFIKKYIATFKFKSIDTETFLNFLKENVPGIEKQIDLELWTEGTGIPPDAYE 375 (524)
Q Consensus 296 ~~fs~i~Y~KGa~~L~mLe~~vG~~~F~~~lr~Yl~~~~~~s~~t~df~~~l~~~~~~~~~~~~~~~W~~~~G~P~~~~~ 375 (524)
+.|+.++|+||+++||||+.+||++.|+++||.|+++|+|++++++||++++++ .+|.++..+ .+|++++|+|+++++
T Consensus 379 ~~f~~~~Y~KGA~vLrMLr~~lGde~F~~gLr~Yl~~~~~~~at~~Df~~ale~-asg~DL~~f-~~W~~q~G~P~l~v~ 456 (875)
T PRK14015 379 NFYTATVYEKGAEVIRMLHTLLGEEGFRKGMDLYFERHDGQAVTCEDFVAAMED-ASGRDLSQF-RRWYSQAGTPRVTVS 456 (875)
T ss_pred hcccchhhhHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHH-HhCCCHHHH-HHHHcCCCCCeEEEE
Confidence 689999999999999999999999999999999999999999999999999999 578888775 599999999999886
Q ss_pred cC
Q 009853 376 PV 377 (524)
Q Consensus 376 ~~ 377 (524)
.+
T Consensus 457 ~~ 458 (875)
T PRK14015 457 DE 458 (875)
T ss_pred EE
Confidence 54
No 6
>TIGR02414 pepN_proteo aminopeptidase N, Escherichia coli type. The M1 family of zinc metallopeptidases contains a number of distinct, well-separated clades of proteins with aminopeptidase activity. Several are designated aminopeptidase N, EC 3.4.11.2, after the Escherichia coli enzyme, suggesting a similar activity profile. This family consists of all aminopeptidases closely related to E. coli PepN and presumed to have similar (not identical) function. Nearly all are found in Proteobacteria, but members are found also in Cyanobacteria, plants, and apicomplexan parasites. This family differs greatly in sequence from the family of aminopeptidases typified by Streptomyces lividans PepN (TIGR02412), from the membrane bound aminopeptidase N family in animals, etc.
Probab=100.00 E-value=4.3e-53 Score=477.21 Aligned_cols=327 Identities=21% Similarity=0.323 Sum_probs=263.7
Q ss_pred CCCceEEEEEEEEEEecCCceEEEEEEEEEEec-CCCcEEEecCCCeEEEEEecCCCceee---EEeCCCCCCCCCceEE
Q 009853 12 STHPLTTHISLSLYFDFSSSTIHAAAILTLASP-HAGPLSLDTRSLTIHQVLDPQTLTPLP---FTLSPTDDPIKGRHLI 87 (524)
Q Consensus 12 ~~~v~~~hy~L~l~id~~~~~~~G~v~i~~~~~-~~~~i~Ld~~~L~I~~v~~~~~g~~~~---~~~~~~~~~~~g~~L~ 87 (524)
|..+.+.||+|+++++++...++|+++|++++. +.+.|+||+.+|+|.+|.+ +|+.+. |..+ ++.|+
T Consensus 4 ~~~~~v~~~~L~l~l~~~~~~v~g~~~i~~~~~~~~~~l~Ld~~~L~I~sV~v--~g~~~~~~~~~~~-------~~~L~ 74 (863)
T TIGR02414 4 PPPFLIEKTHLDFDLHEEETVVRARLTVRRNPDGNGAPLVLDGEELKLLSIAI--DGKPLAAGDYQLD-------DETLT 74 (863)
T ss_pred CCCceEEEEEEEEEEeCCCeEEEEEEEEEEecCCCCCcEEEEecCCEEEEEEE--CCEecCcceEEEc-------CCEEE
Confidence 557999999999999999999999999999874 4568999999999999999 565543 4443 45788
Q ss_pred EEe-CCceEEEEEEEeccC-CCCCcccCCCccCCCcccEEEeccccCCcceecccCCCCCCceeEEEEEEecCC-C-ccc
Q 009853 88 VTL-SDHSSVLIVFSTSPS-SSALQWLSPPQTFNKLHPFVYTQCQAIHARSVFPCQDTPAARVRYKALINIPRQ-L-SAV 163 (524)
Q Consensus 88 I~l-~~~~~v~i~Y~~~~~-~~~l~~l~~~qt~g~~~p~l~Tq~ep~~AR~~fPC~D~P~~Katf~~~I~~p~~-~-~al 163 (524)
|.. ++.+.|+|.|...|. ..++.++... ..+++|||||.+||++|||+|+|++||||+++|++|++ | +++
T Consensus 75 I~~~~~~~~l~i~~~~~p~~n~~l~GlY~s------~~~~~TQ~Ep~gaR~ifpc~DeP~~kAtf~vtI~~p~~~y~v~l 148 (863)
T TIGR02414 75 IASVPESFTLEIETEIHPEENTSLEGLYKS------GGNFCTQCEAEGFRRITYFPDRPDVMSRYTVTITADKKKYPVLL 148 (863)
T ss_pred EeeCCccEEEEEEEEeecccCCCCeEEEEe------CCeEEEEecCCCCCcCCCCCCCCCCceEEEEEEEECCCcceEEE
Confidence 874 567899999998765 3445444321 13689999999999999999999999999999999986 6 568
Q ss_pred ccccccCCCCCCCCCccccCCccccccccccccCCCeEEEEEeccCCCCceeeeeeeccceeeec--------CCeeEEE
Q 009853 164 MAARHEDRRPPVAGETKAFGSSCFDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREV--------GPRTRVY 235 (524)
Q Consensus 164 sn~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~t~pipsYLiA~avG~l~~~~~--------g~~~~V~ 235 (524)
|||.++.. .. ..+|+++++|+.++|||+||+||+||+|+..+. +++++||
T Consensus 149 SNg~~~~~------~~----------------~~~g~~~~~f~~t~pmptYLfA~vaGdf~~~~~~~~t~sg~~v~l~iy 206 (863)
T TIGR02414 149 SNGNKIAS------GE----------------LPDGRHWAEWEDPFPKPSYLFALVAGDLDVLEDTFTTKSGREVALRVY 206 (863)
T ss_pred eCCccccc------ee----------------cCCCeEEEEEeCCCCcChhHheEEEeCCEEEEEEeeccCCCceEEEEE
Confidence 99865421 11 146778899999999999999999999998762 3678999
Q ss_pred ecC-------------------------------------------------CceehhHHHH--------------HHHH
Q 009853 236 AES-------------------------------------------------GFTTYAERRI--------------VEVV 252 (524)
Q Consensus 236 ~~p-------------------------------------------------G~~ty~E~~i--------------~~~i 252 (524)
++| |+++|.|..+ +..+
T Consensus 207 ~~p~~~~~~~~al~~~~~~L~~~E~~fG~pYPl~k~diVavpdf~~GaMEN~GLi~f~e~~lL~~~~~~td~~~~~i~~V 286 (863)
T TIGR02414 207 VEEGNKDKCDHAMESLKKAMKWDEEVFGLEYDLDIFMIVAVDDFNMGAMENKGLNIFNSKYVLADPETATDADYERIESV 286 (863)
T ss_pred EccCcHHHHHHHHHHHHHHHHHHHHHhCCCCChhhccEEecCCCCCccccccceeccccceEEeCCCCCCHHHHHHHHHH
Confidence 998 8888887543 3456
Q ss_pred HhHHHHHHHhhc-----chhH--HHHHHHhhhccccc--------C------ccc---------ccCCC------CCcCC
Q 009853 253 QGEDRAVLNIGI-----GWRG--LNEEMERFKDNLEC--------T------KLK---------TNQEG------LDPDD 296 (524)
Q Consensus 253 ~~~e~ah~w~g~-----~W~~--L~Eg~a~~~~~~~~--------~------~L~---------~~~~~------~~pd~ 296 (524)
++||++|||||+ ||++ |||||++|++.... . .++ +..++ .++++
T Consensus 287 IaHElaHqWfGNlVT~~~W~~LWLnEGfAty~e~~~~~~~~~~~~~~~~~~~~lr~~~f~~D~~p~~~Pi~~~~~~~i~~ 366 (863)
T TIGR02414 287 IAHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSADMTSRAVKRIEDVRLLRAHQFPEDAGPMAHPVRPESYVEINN 366 (863)
T ss_pred HHHHHHHHHhcceeeecchhhhhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhcccccccCCCCCCcchhhHHh
Confidence 777999999993 6777 99999999874210 0 010 00111 13356
Q ss_pred CCCCCccchhHHHHHHHHHhhChhHHHHHHHHHHHHhCCCCCCHHHHHHHHHhhCCCCchhHHHHHhhcCCCCCCccccc
Q 009853 297 VYSQVPYEKGFQFLWRIERQIGRPAFDEFIKKYIATFKFKSIDTETFLNFLKENVPGIEKQIDLELWTEGTGIPPDAYEP 376 (524)
Q Consensus 297 ~fs~i~Y~KGa~~L~mLe~~vG~~~F~~~lr~Yl~~~~~~s~~t~df~~~l~~~~~~~~~~~~~~~W~~~~G~P~~~~~~ 376 (524)
.|+.++|+||+++||||+.+||++.|+++|+.|+++|+|++++++||+++|++ .+|.++..+ .+|++++|+|+++++.
T Consensus 367 ~y~~i~Y~KGA~vLrML~~~LGee~F~~gLr~Yl~r~~~~~at~~Df~~ale~-asg~dL~~f-~~W~~q~G~P~v~v~~ 444 (863)
T TIGR02414 367 FYTATVYEKGAEVIRMLHTLLGEEGFRKGMDLYFSRHDGQAVTCEDFVAAMED-ASGRDLNQF-RRWYSQAGTPVLEVKE 444 (863)
T ss_pred ccchHHhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHH-HhCCCHHHH-HHHHcCCCCceeEEEE
Confidence 89999999999999999999999999999999999999999999999999999 578888765 5999999999998865
Q ss_pred C
Q 009853 377 V 377 (524)
Q Consensus 377 ~ 377 (524)
+
T Consensus 445 ~ 445 (863)
T TIGR02414 445 N 445 (863)
T ss_pred E
Confidence 3
No 7
>COG0308 PepN Aminopeptidase N [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-51 Score=468.03 Aligned_cols=330 Identities=25% Similarity=0.375 Sum_probs=260.1
Q ss_pred EEEEEEEEEecCCceEEEEEEEEEEe--cCC-CcEEEecCCCeEEEEEecCCCceee--EEeCCCCCCCCCceEEEEeC-
Q 009853 18 THISLSLYFDFSSSTIHAAAILTLAS--PHA-GPLSLDTRSLTIHQVLDPQTLTPLP--FTLSPTDDPIKGRHLIVTLS- 91 (524)
Q Consensus 18 ~hy~L~l~id~~~~~~~G~v~i~~~~--~~~-~~i~Ld~~~L~I~~v~~~~~g~~~~--~~~~~~~~~~~g~~L~I~l~- 91 (524)
.|.+|++++++++..|+|++++++.. ... ..|+||+.+|+|.+|.+ +|+... +.++ ++.++|...
T Consensus 25 ~~~~Ld~~~~~~~~~~~g~~~i~~~~~~~~~~~~lvld~~~l~i~~v~i--dg~~~~~~~~~~-------~~~~~i~~~~ 95 (859)
T COG0308 25 YDIDLDLDLDPEKTTFEGSVTIRLDAGWRSGADPLVLDAVGLEIRSVKI--DGKALTAWYRLD-------GDALTITVAP 95 (859)
T ss_pred cceEEEeeecCCccEEEEEEEEEEeccccCCCCeEEEeccccEEEEEEE--cCcccccccccc-------Cccceeeecc
Confidence 55555566666678999999999986 232 34999999999999999 555433 2222 344444421
Q ss_pred -------CceEEEEEEEeccCCCCCcccCCCccCCCcccEEEeccccCCcceecccCCCCCCceeEEEEEEecCCCcccc
Q 009853 92 -------DHSSVLIVFSTSPSSSALQWLSPPQTFNKLHPFVYTQCQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVM 164 (524)
Q Consensus 92 -------~~~~v~i~Y~~~~~~~~l~~l~~~qt~g~~~p~l~Tq~ep~~AR~~fPC~D~P~~Katf~~~I~~p~~~~als 164 (524)
....+.|.+..+...+..+++.-.++.+...+|++|||||.+||+||||+|+|++|+||+++|++++++.++|
T Consensus 96 ~~~~~~~~~~~l~i~~~~~~~~s~~~~~Gly~~~~~~~~~~~TQ~Ea~~aR~~fpc~D~P~~katf~~~i~~~k~~~~iS 175 (859)
T COG0308 96 PIPERSERPFTLAITYEFTGPVSNDTLEGLYRSGYGGKPYLITQCEAEGARRIFPCIDEPDVKATFTLTIRADKGPKLIS 175 (859)
T ss_pred ccccccCCCccEEEEEEecccccCccccceeecCCCCCeeEEeecccCCCceeeecCCCCCCcceeEEEEEecCcceeee
Confidence 2356667777664444333333333444447999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCccccCCccccccccccccCCCeEEEEEeccCCCCceeeeeeeccceeeec-------CCeeEEEec
Q 009853 165 AARHEDRRPPVAGETKAFGSSCFDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREV-------GPRTRVYAE 237 (524)
Q Consensus 165 n~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~t~pipsYLiA~avG~l~~~~~-------g~~~~V~~~ 237 (524)
||..... .. ..+|+++++|++++||||||+|+++|+|++.+. +.+++||++
T Consensus 176 N~~~~~~------~~----------------~~~g~~~~~f~~~~~mptYL~al~~G~~~~~~~~~~~~~~~v~l~iy~~ 233 (859)
T COG0308 176 NGNLIDG------GT----------------LVDGRKIVKFEDTPPMPTYLFALVAGDLEVFRDKFDTRSRDVPLEIYVP 233 (859)
T ss_pred cCCcccc------cc----------------ccCCcEEEEEcCCCCcchHhhheeeecceeeeeeeccCCCCeeEEEEec
Confidence 9976532 11 145688999999999999999999999987662 568899999
Q ss_pred C------------------------------------------------CceehhHHHHH--------------HHHHhH
Q 009853 238 S------------------------------------------------GFTTYAERRIV--------------EVVQGE 255 (524)
Q Consensus 238 p------------------------------------------------G~~ty~E~~i~--------------~~i~~~ 255 (524)
+ |+++|++..++ +.+..|
T Consensus 234 ~g~~~~a~~~~~~~~~~~~~~e~~fg~~y~l~~~~V~v~~f~~GaMEN~Gl~tf~~~~ll~~~~~at~~~~~~~~~viaH 313 (859)
T COG0308 234 PGVLDRAKYALDETKRSIEFYEEYFGLPYALPIDIVAVPDFSAGAMENWGLVTFREKYLLADPETATDSDYENVEEVIAH 313 (859)
T ss_pred CcchhhhhhhHHHHHHHhhhHHHhcCCCCCCcccEEeccCCCCccccccceeEEeeeEEeeCcccchhHHHHHHHHHHHH
Confidence 9 88888876432 336777
Q ss_pred HHHHHHhhc-----chhH--HHHHHHhhhcccccCcccc-------------------------c-------CCCCCcCC
Q 009853 256 DRAVLNIGI-----GWRG--LNEEMERFKDNLECTKLKT-------------------------N-------QEGLDPDD 296 (524)
Q Consensus 256 e~ah~w~g~-----~W~~--L~Eg~a~~~~~~~~~~L~~-------------------------~-------~~~~~pd~ 296 (524)
|+||||||+ ||++ |||||++|++......+.+ . .++.++++
T Consensus 314 ElaHqWfGnlVT~~~W~~lWLnEgfat~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~hPi~~~~~~~~ei~~ 393 (859)
T COG0308 314 ELAHQWFGNLVTMKWWDDLWLNEGFATFREVLWSEDLGGRAWKRWEDFRTLRTSIALAEDSLPSSHPIRVDVYDPKEIND 393 (859)
T ss_pred HHhhhcccceeeccCHHHHHHhhhhHHHHHHHHHHHhcchHHHHHHHHHHHhhhHHHhhccccccCCcccCCCCccchhh
Confidence 999999993 7777 9999999987532222221 1 12356788
Q ss_pred CCCCCccchhHHHHHHHHHhhChhHHHHHHHHHHHHhCCCCCCHHHHHHHHHhhCCCCchhHHHHHhhcCCCCCCccccc
Q 009853 297 VYSQVPYEKGFQFLWRIERQIGRPAFDEFIKKYIATFKFKSIDTETFLNFLKENVPGIEKQIDLELWTEGTGIPPDAYEP 376 (524)
Q Consensus 297 ~fs~i~Y~KGa~~L~mLe~~vG~~~F~~~lr~Yl~~~~~~s~~t~df~~~l~~~~~~~~~~~~~~~W~~~~G~P~~~~~~ 376 (524)
.||.|+|+||+++||||+.++|++.|+++|+.||++|+|++++++|||+++++ .+|.+++..|+.|++++|+|++.++.
T Consensus 394 ~fD~i~Y~KGs~vlrml~~~lG~e~F~kgl~~yf~~h~~~~~~~~Dl~~a~~~-~sg~dl~~~~~~w~~q~G~P~l~v~~ 472 (859)
T COG0308 394 FFDAIVYEKGASVLRMLETLLGEEAFRKGLSLYFKRHAGGNATTMDLWKALED-ASGKDLSAFFESWLSQAGYPVLTVSV 472 (859)
T ss_pred hcchhhcchhHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHH-HhCCcHHHHHHHHHhCCCCCceeeee
Confidence 99999999999999999999999999999999999999999999999999999 68999999999999999999999877
Q ss_pred CCc
Q 009853 377 VSS 379 (524)
Q Consensus 377 ~~~ 379 (524)
+.+
T Consensus 473 ~~~ 475 (859)
T COG0308 473 RYD 475 (859)
T ss_pred ecc
Confidence 654
No 8
>PF01433 Peptidase_M1: Peptidase family M1 This is family M1 in the peptidase classification.; InterPro: IPR014782 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M1 (clan MA(E)), the type example being aminopeptidase N from Homo sapiens (Human). The protein fold of the peptidase domain for members of this family resembles that of thermolysin, the type example for clan MA. Membrane alanine aminopeptidase (3.4.11.2 from EC) is part of the HEXXH+E group; it consists entirely of aminopeptidases, spread across a wide variety of species []. Functional studies show that CD13/APN catalyzes the removal of single amino acids from the amino terminus of small peptides and probably plays a role in their final digestion; one family member (leukotriene-A4 hydrolase) is known to hydrolyse the epoxide leukotriene-A4 to form an inflammatory mediator []. This hydrolase has been shown to have aminopeptidase activity [], and the zinc ligands of the M1 family were identified by site-directed mutagenesis on this enzyme [] CD13 participates in trimming peptides bound to MHC class II molecules [] and cleaves MIP-1 chemokine, which alters target cell specificity from basophils to eosinophils []. CD13 acts as a receptor for specific strains of RNA viruses (coronaviruses) which cause a relatively large percentage of upper respiratory trace infections. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding; PDB: 2XQ0_A 2XPY_A 2XPZ_A 3SE6_B 3EBH_A 3EBG_A 3T8V_A 3Q44_A 3Q43_A 3EBI_A ....
Probab=100.00 E-value=2.5e-44 Score=378.76 Aligned_cols=266 Identities=29% Similarity=0.446 Sum_probs=207.4
Q ss_pred CCCCCceEEEEEEEEEEecCCceEEEEEEEEEEec-CCCcEEEecCCCeEEEEEecCCCceee-------EEeCCCCCCC
Q 009853 10 TESTHPLTTHISLSLYFDFSSSTIHAAAILTLASP-HAGPLSLDTRSLTIHQVLDPQTLTPLP-------FTLSPTDDPI 81 (524)
Q Consensus 10 s~~~~v~~~hy~L~l~id~~~~~~~G~v~i~~~~~-~~~~i~Ld~~~L~I~~v~~~~~g~~~~-------~~~~~~~~~~ 81 (524)
++|++++|.||+|+|++|+++..|+|+|+|++++. +++.|+||+.+|+|.+|.+. +.... +.++..
T Consensus 1 RLp~~v~p~~Y~L~L~~~~~~~~f~G~v~I~~~~~~~~~~I~L~~~~l~I~~v~~~--~~~~~~~~~~~~~~~~~~---- 74 (390)
T PF01433_consen 1 RLPDDVDPLHYDLDLTPDFEKRTFSGTVTITFEVTEPTNSIVLHAKDLSISSVSLN--GNDSSSEYKSSPFEYDDE---- 74 (390)
T ss_dssp S--TTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSTECEEEEEESSEEEEEEEET--TEECSCTECCEEEEEECC----
T ss_pred CCCCCeEEEEEEEEEEEeCCCCEEEEEEEEEEEEecCCCEEEEEeeccEEEEEeec--Cccccccccccceeeccc----
Confidence 57999999999999999999999999999999995 67899999999999999994 32221 444432
Q ss_pred CCceEEEEeC-----C-ceEEEEEEEeccCC--CCCc---ccCCCccCCCcccEEEeccccCCcceecccCCCCCCceeE
Q 009853 82 KGRHLIVTLS-----D-HSSVLIVFSTSPSS--SALQ---WLSPPQTFNKLHPFVYTQCQAIHARSVFPCQDTPAARVRY 150 (524)
Q Consensus 82 ~g~~L~I~l~-----~-~~~v~i~Y~~~~~~--~~l~---~l~~~qt~g~~~p~l~Tq~ep~~AR~~fPC~D~P~~Katf 150 (524)
.+.|+|.++ + .+.|+|.|++.+.. .|+. |.. ++.++..++++|||||.+||+||||||+|+.||+|
T Consensus 75 -~~~l~I~l~~~l~~g~~~~L~I~y~g~~~~~~~G~~~~~y~~--~~~~~~~~~~~t~~~p~~ar~~fPc~D~p~~ka~f 151 (390)
T PF01433_consen 75 -NEKLTITLPKPLPPGSNYTLRIEYSGKISDDSSGLYRSSYTD--QTNGNTRWYIYTQFEPNGARRWFPCFDEPSFKATF 151 (390)
T ss_dssp -BTEEEEEEEEECSTTEEEEEEEEEEEECBSSSSEEEEEEEE---GTSSSETCEEEEE-TTTTGGGTSSB--STTSEEEE
T ss_pred -cceeehhhhhhcccCcEEEEEEEEeecccccccccccceeec--ccccccCCceeecccccccceeeeeeccCCccceE
Confidence 346899875 2 38999999997543 4543 333 45677889999999999999999999999999999
Q ss_pred EEEEEecCCCcccccccccCCCCCCCCCccccCCccccccccccccCCCeEEEEEeccCCCCceeeeeeeccceeeec--
Q 009853 151 KALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSCFDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREV-- 228 (524)
Q Consensus 151 ~~~I~~p~~~~alsn~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~t~pipsYLiA~avG~l~~~~~-- 228 (524)
+++|++|++++|+|||..... .. ..+++++++|+.++|||+|++||+||+|+..+.
T Consensus 152 ~~~i~~p~~~~~~sng~~~~~------~~----------------~~~~~~~~~f~~t~p~~~yl~a~~vg~~~~~~~~~ 209 (390)
T PF01433_consen 152 DLTITHPKDYTALSNGPLEEE------ES----------------NDDGWKTTTFETTPPMPTYLFAFAVGDFESVEVTT 209 (390)
T ss_dssp EEEEEEETTTEEEESSEEEEE------EE----------------ETTTEEEEEEEEEEEEEGGG--EEEESEEEEEEET
T ss_pred EEeeeccccceeecccccccc------cc----------------ccccceeEeeecccccCchhhhhhcCccccccccc
Confidence 999999999999999976431 10 146799999999999999999999999998773
Q ss_pred --CCeeEEEecC-------------------------------------------------CceehhHHHH---------
Q 009853 229 --GPRTRVYAES-------------------------------------------------GFTTYAERRI--------- 248 (524)
Q Consensus 229 --g~~~~V~~~p-------------------------------------------------G~~ty~E~~i--------- 248 (524)
|.++++|++| |+++|.|..+
T Consensus 210 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~yp~~k~~~v~~p~~~~~~me~~g~i~~~~~~l~~~~~~~~~ 289 (390)
T PF01433_consen 210 KSGVPVRVYARPGDEEQLQFALDIAPKALEYYEEYFGIPYPFKKLDIVAVPDFPFGGMENWGLITYRESYLLYDPDISTI 289 (390)
T ss_dssp TTEEEEEEEEECTCGGGHHHHHHHHHHHHHHHHHHHTS--SSSEEEEEEEST-SSSEE--TTEEEEEGGGTS-STTTS-H
T ss_pred ccccchheeehhhhHHHHHHHHHhhHHHHHHHHhhccccceecceeEEEEeccccccccccccccccccccccCcccccc
Confidence 3689999999 8888887643
Q ss_pred -----HHHHHhHHHHHHHhhc-----chhH--HHHHHHhhhcccccCccc---------------------------cc-
Q 009853 249 -----VEVVQGEDRAVLNIGI-----GWRG--LNEEMERFKDNLECTKLK---------------------------TN- 288 (524)
Q Consensus 249 -----~~~i~~~e~ah~w~g~-----~W~~--L~Eg~a~~~~~~~~~~L~---------------------------~~- 288 (524)
+..+++||+||||||+ +|.+ |+||||+|++.....++. |-
T Consensus 290 ~~~~~~~~~iahElahqWfGn~vt~~~w~d~WL~Eg~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~ 369 (390)
T PF01433_consen 290 GDKQEIASLIAHELAHQWFGNLVTPKWWSDLWLNEGFATYLEYLILEKLFGEWQMMELFLVQEMQRALREDALPNSHPLS 369 (390)
T ss_dssp HHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHHGHHHHHHHHHHHHHHHHHHHHTSTTCCCSS
T ss_pred hhhhhhHHHHHHHHHHHHhccCCccccchhhhHHHHHHHHHHHHhHhhccCcccchhhhhhhhHHHHHHHhhcCCCcceE
Confidence 2455667999999993 6777 999999998764222111 10
Q ss_pred ---CCCCCcCCCCCCCccchh
Q 009853 289 ---QEGLDPDDVYSQVPYEKG 306 (524)
Q Consensus 289 ---~~~~~pd~~fs~i~Y~KG 306 (524)
.+..++++.|+.++|.||
T Consensus 370 ~~~~~~~~~~~~f~~~~Y~KG 390 (390)
T PF01433_consen 370 SEVEDPSDIDDMFDDISYNKG 390 (390)
T ss_dssp SSSSSESCGGGGSSHHHHHHH
T ss_pred eCCCCCCChHHhcCccccCCC
Confidence 123567789999999999
No 9
>PF09127 Leuk-A4-hydro_C: Leukotriene A4 hydrolase, C-terminal; InterPro: IPR015211 This C-terminal domain is found in peptidases belonging to MEROPS peptidase family M1, particularly: aminopeptidase-1 of Caenorhabditis elegans, aminopeptidase O, aminopeptidase B and the bifunctional leukotriene A4 hydrolase/aminopeptidase. The domain adopts a structure consisting of two layers of parallel alpha-helices, five in the inner layer and four in the outer, arranged in an antiparallel manner, with perpendicular loops containing short helical segments on top. It is required for the formation of a deep cleft harbouring the catalytic Zn2+ site in leukotriene A4 hydrolase []. ; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0019370 leukotriene biosynthetic process; PDB: 3FUJ_A 3FU3_A 3FTX_A 3FTS_A 3B7R_L 2VJ8_A 3FTW_A 3FUF_A 3FU0_A 3CHO_A ....
Probab=100.00 E-value=6.7e-40 Score=296.31 Aligned_cols=137 Identities=36% Similarity=0.627 Sum_probs=120.9
Q ss_pred cchHHHHHHHHHhhc----CCCCCccccccchhHHHHHHHHhC--CCCCcHHHHHHHhhhcCCCCCCChhhhHHHHHHHH
Q 009853 379 SLYSKIVSLANEFKL----GKIPKEDEVADWQGQEWELYLENL--PKSAEASQVLALDERYRLSESKDYEVKVAFLQLAI 452 (524)
Q Consensus 379 ~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~fl~~l--~~~~~~~~~~~ld~~y~~~~~~n~ei~~~w~~~~~ 452 (524)
+++++|.+|+++|++ +..++..|+++|+++|+++||+.| +++++++++++||++|+|+.++|+||++||+++||
T Consensus 1 sL~~~~~~La~~W~~~~~~~~~~~~~d~~~~~~~Q~~~FL~~L~~~~~l~~~~l~~Ld~~y~l~~s~NaEI~~rW~~l~i 80 (143)
T PF09127_consen 1 SLADQCYALAEKWISADEDKSPFSAEDIKDWSSNQWVVFLDQLLEPKPLSPEKLQALDKVYKLSNSKNAEIRFRWLRLAI 80 (143)
T ss_dssp CCCHHHHHHHHHHHHHHCTCCC-SGGGGTT--HHHHHHHHHHHHTCCG-CHHHHHHHHHHHCHCT-SSHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhcccccCCCCHHHHHhCCHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 357899999999997 335678899999999999999999 67899999999999999999999999999999999
Q ss_pred hCCCcchHHHHHHHHHhcCCcccchHHHHHHhcCCCCchhHHHHHHHHHHhccccChHHHHHHHHHh
Q 009853 453 SSSCKDYYGEVEKTLKEVGRMKYLRPLYIALVQGAGKDEEKILAKRVFAEARDSYHPIAQGVVESIF 519 (524)
Q Consensus 453 ~~~~~~~~~~~~~~l~~~grmk~~~plyr~L~~~~~~~~~~~~A~~~f~~~~~~yhpi~~~~v~~~l 519 (524)
+++|+++++.+++||++||||||||||||+|++ + +++++|+++|+++|++|||||+++|+|||
T Consensus 81 ~~~~~~~~~~v~~fL~~~GRmKfvrPlYr~L~~-~---~~~~~A~~~F~~~k~~YHpi~~~~V~kdL 143 (143)
T PF09127_consen 81 KAKYEPALPQVEEFLGSQGRMKFVRPLYRALAK-P---EGRDLAKETFEKAKPFYHPITRQMVEKDL 143 (143)
T ss_dssp HTT-GGGHHHHHHHHHHS--HHHHHHHHHHHHT-T---TCHHHHHHHHHHHGGGS-HHHHHHHHHHT
T ss_pred hcCcHHHHHHHHHHHHHcCCChhHHHHHHHHHc-c---chHHHHHHHHHHHHHhcCHHHHHHHHHhC
Confidence 999999999999999999999999999999999 4 47999999999999999999999999997
No 10
>KOG1932 consensus TATA binding protein associated factor [Transcription]
Probab=99.88 E-value=3.8e-21 Score=212.50 Aligned_cols=202 Identities=22% Similarity=0.327 Sum_probs=156.3
Q ss_pred ceEEEEEEEEE-EecCCceEEEEEEEEEEec--CCCcEEEecCCCeEEEEEecCCCceeeEEeCCC--------------
Q 009853 15 PLTTHISLSLY-FDFSSSTIHAAAILTLASP--HAGPLSLDTRSLTIHQVLDPQTLTPLPFTLSPT-------------- 77 (524)
Q Consensus 15 v~~~hy~L~l~-id~~~~~~~G~v~i~~~~~--~~~~i~Ld~~~L~I~~v~~~~~g~~~~~~~~~~-------------- 77 (524)
..+.|..+.|. |||++++|.|.++|++... +...|+||+++|.|.+|.|+ |....|.+.+.
T Consensus 25 ~~~~hQkv~l~~Idf~~rsi~G~tEitI~P~~~nL~~i~l~~kql~I~sV~V~--~~~~~f~y~d~~q~~~~~~~~~~~l 102 (1180)
T KOG1932|consen 25 RPVLHQKVSLSNIDFSKRSIIGFTEITIQPLVPNLSVIVLHSKQLRILSVLVN--GSPTKFIYNDPTQNDCTDEIWQRVL 102 (1180)
T ss_pred CcceEEEEEeecccceeeEEEeEEEEEEecCCCCcceEEEeccccEEEEEEec--Ccccceeecchhhhhhhhhhhhhhh
Confidence 45899999999 9999999999999999963 56899999999999999994 33333433221
Q ss_pred -------------CCCC-CCceEEEEeCC----------ceEEEEEEEeccCCCCCcccCCCccCCCcccEEEeccccC-
Q 009853 78 -------------DDPI-KGRHLIVTLSD----------HSSVLIVFSTSPSSSALQWLSPPQTFNKLHPFVYTQCQAI- 132 (524)
Q Consensus 78 -------------~~~~-~g~~L~I~l~~----------~~~v~i~Y~~~~~~~~l~~l~~~qt~g~~~p~l~Tq~ep~- 132 (524)
.+.. ..+.|.|.+|. ...++|.|+......|+.|..+........+.+||-+-.+
T Consensus 103 ~~~s~~~~~~~~y~~l~~~~g~L~I~ipk~~~~~~ee~~~lr~~I~~s~~~pk~gi~Fv~~~~~~~~~~~hvft~~~~~~ 182 (1180)
T KOG1932|consen 103 DPASQSHFLAVQYEDLDEDNGELLIKIPKESKKVGEELKALRLRIDFSVREPKDGIKFVRPNYIVSPRDKHVFTNNTQIS 182 (1180)
T ss_pred hhhhhhhhHHHhhhccccCCCeEEEEcCchhhhhhhhccceEEEEEEEccCCCCCeEEeccCcccCcccCceEeecCccc
Confidence 0111 12589999983 3678899999877799999988531122334588777653
Q ss_pred -CcceecccCCCCCCceeEEEEEEecCCCcccccccccCCCCCCCCCccccCCccccccccccccCCCeEEEEEeccCCC
Q 009853 133 -HARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSCFDFDYESLWCADGRVVEEFEMNQPV 211 (524)
Q Consensus 133 -~AR~~fPC~D~P~~Katf~~~I~~p~~~~alsn~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~t~pi 211 (524)
.||+||||.|++.-++||++.+++|+.++++|+|.+.... .. .+-..++++|..+.||
T Consensus 183 s~ar~WfPCvD~~~e~~tWeLeftvp~~~~av~~geLl~~v-----~~----------------~D~~Kkt~~ys~tvPv 241 (1180)
T KOG1932|consen 183 SSARSWFPCVDSSYERCTWELEFTVPKNLVAVSCGELLEQV-----ET----------------PDLRKKTYHYSLTVPV 241 (1180)
T ss_pred cccceEEeecCCccccceEEEEEEecccceeccchhhhhee-----ec----------------ccccccEEEEEEeccC
Confidence 4799999999999999999999999999999999765321 11 1335679999999999
Q ss_pred Cceeeeeeeccceeee--cCCeeEEEecCC
Q 009853 212 PPYLFAFAVGELGFRE--VGPRTRVYAESG 239 (524)
Q Consensus 212 psYLiA~avG~l~~~~--~g~~~~V~~~pG 239 (524)
.+.-||||||.|+... .++.+..|+-||
T Consensus 242 A~~~I~~AiG~F~~~~~P~~~~i~~f~LP~ 271 (1180)
T KOG1932|consen 242 APSNIGFAIGPFKSYVEPSMIDITHFCLPG 271 (1180)
T ss_pred CccccceeeccccccCCCccCcceeEecCc
Confidence 9999999999999873 366778888883
No 11
>PF13485 Peptidase_MA_2: Peptidase MA superfamily
Probab=97.98 E-value=1.2e-05 Score=70.20 Aligned_cols=79 Identities=22% Similarity=0.339 Sum_probs=55.1
Q ss_pred HHHhHHHHHHHhhc--c---hhH--HHHHHHhhhcccccCc----c---------cc--cCCC-CCcCCCCCCCccchhH
Q 009853 251 VVQGEDRAVLNIGI--G---WRG--LNEEMERFKDNLECTK----L---------KT--NQEG-LDPDDVYSQVPYEKGF 307 (524)
Q Consensus 251 ~i~~~e~ah~w~g~--~---W~~--L~Eg~a~~~~~~~~~~----L---------~~--~~~~-~~pd~~fs~i~Y~KGa 307 (524)
.+..||++|+|++. + ... ++||+|+|.+...... + .+ .+.. .+....+....|.+|+
T Consensus 27 ~~l~HE~~H~~~~~~~~~~~~~~~W~~EG~A~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Y~~~~ 106 (128)
T PF13485_consen 27 RVLAHELAHQWFGNYFGGDDNAPRWFNEGLAEYVEGRIEDEFDEDLKQAIESGSLPPLEPLNSSFDFSWEDDSLAYYQGY 106 (128)
T ss_pred HHHHHHHHHHHHHHHcCCCccCchHHHHHHHHHHhcCccchhHHHHHHHHHcCCCCChHHHhccccccccccccHHHHHH
Confidence 55556999999982 2 111 9999999998531110 0 00 0111 1124566678999999
Q ss_pred HHHHHHHHhhChhHHHHHHHHH
Q 009853 308 QFLWRIERQIGRPAFDEFIKKY 329 (524)
Q Consensus 308 ~~L~mLe~~vG~~~F~~~lr~Y 329 (524)
.++++|+...|.++|.++|+.|
T Consensus 107 ~~~~~L~~~~G~~~~~~~l~~~ 128 (128)
T PF13485_consen 107 LFVRFLEEKYGREKFKAFLREY 128 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999976
No 12
>KOG1047 consensus Bifunctional leukotriene A4 hydrolase/aminopeptidase LTA4H [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Defense mechanisms; Amino acid transport and metabolism]
Probab=92.06 E-value=0.05 Score=58.51 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=26.2
Q ss_pred HHhHHHHHHHhhc-----chhH--HHHHHHhhhcccccCcc
Q 009853 252 VQGEDRAVLNIGI-----GWRG--LNEEMERFKDNLECTKL 285 (524)
Q Consensus 252 i~~~e~ah~w~g~-----~W~~--L~Eg~a~~~~~~~~~~L 285 (524)
++.||+||-|+|+ .|.+ |||||++|.+......+
T Consensus 291 vIaHEIAHSWtGNlVTN~sWehfWLNEGfTvylErrI~g~~ 331 (613)
T KOG1047|consen 291 VIAHEIAHSWTGNLVTNASWEHFWLNEGFTVYLERRIVGRL 331 (613)
T ss_pred HHHHHhhhhhcccccccCccchhhhcccchhhhhhhhhhhh
Confidence 4445899999994 7877 99999999987544333
No 13
>COG3975 Predicted protease with the C-terminal PDZ domain [General function prediction only]
Probab=89.54 E-value=3.2 Score=44.90 Aligned_cols=74 Identities=20% Similarity=0.359 Sum_probs=61.6
Q ss_pred CCCc--cchhHHHHHHHHHhhC-----hhHHHHHHHHHHHHhCC--CCCCHHHHHHHHHhhCCCCchhHHHHHhhcCCCC
Q 009853 299 SQVP--YEKGFQFLWRIERQIG-----RPAFDEFIKKYIATFKF--KSIDTETFLNFLKENVPGIEKQIDLELWTEGTGI 369 (524)
Q Consensus 299 s~i~--Y~KGa~~L~mLe~~vG-----~~~F~~~lr~Yl~~~~~--~s~~t~df~~~l~~~~~~~~~~~~~~~W~~~~G~ 369 (524)
..++ |.||+.+--+|...|- ..-++.++|...+.+.. +..+.+++...++. ..|.++..+++.-+++.--
T Consensus 351 n~~~sYY~kG~lv~L~lDl~iR~r~~~~~SLDdvmram~~~~~~~~~~~t~e~v~av~~~-~tg~dl~~f~~~~i~~~~~ 429 (558)
T COG3975 351 NRLVSYYQKGALVALLLDLLIRERGGGQKSLDDVMRALWKEFGRAERGYTPEDVQAVLEN-VTGLDLATFFDEYIEGTEP 429 (558)
T ss_pred ccchhhhhchhHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCcCccCCCHHHHHHHHHh-hccccHHHHHHHHhhcCCC
Confidence 3445 9999999988877772 23499999999999876 78899999999998 6789999999999999887
Q ss_pred CCcc
Q 009853 370 PPDA 373 (524)
Q Consensus 370 P~~~ 373 (524)
|++.
T Consensus 430 ~~l~ 433 (558)
T COG3975 430 PPLN 433 (558)
T ss_pred CChh
Confidence 7754
No 14
>PF04450 BSP: Peptidase of plants and bacteria; InterPro: IPR007541 These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens [].
Probab=84.47 E-value=5.6 Score=38.33 Aligned_cols=102 Identities=17% Similarity=0.143 Sum_probs=65.8
Q ss_pred HHHHHHHHhHHHHHHHhhc------chhHHHHHHHhhhcccccCcccccCCCCCcC--CCCCCCccchhHHHHHHHHH-h
Q 009853 246 RRIVEVVQGEDRAVLNIGI------GWRGLNEEMERFKDNLECTKLKTNQEGLDPD--DVYSQVPYEKGFQFLWRIER-Q 316 (524)
Q Consensus 246 ~~i~~~i~~~e~ah~w~g~------~W~~L~Eg~a~~~~~~~~~~L~~~~~~~~pd--~~fs~i~Y~KGa~~L~mLe~-~ 316 (524)
..|..+|.| |++|.|-.. +| |-||+|.|.-... -+.|.+ ...|. +.++ -.|.--|.||.+||. .
T Consensus 94 ~Ei~Gvl~H-E~~H~~Q~~~~~~~P~~--liEGIADyVRl~a--G~~~~~-w~~p~~~~~wd-~gY~~TA~FL~wle~~~ 166 (205)
T PF04450_consen 94 DEIIGVLYH-EMVHCWQWDGRGTAPGG--LIEGIADYVRLKA--GYAPPH-WKRPGGGDSWD-DGYRTTARFLDWLEDNR 166 (205)
T ss_pred HHHHHHHHH-HHHHHhhcCCCCCCChh--heecHHHHHHHHc--CCCCcc-ccCCCCCCCcc-cccHHHHHHHHHHHhcc
Confidence 357888887 799966432 33 9999999974211 122222 11222 2344 589999999999999 6
Q ss_pred hChhHHHHHHHHHHHHhCCCCCCHHHHHHHHHhhCCCCchhHHHHH
Q 009853 317 IGRPAFDEFIKKYIATFKFKSIDTETFLNFLKENVPGIEKQIDLEL 362 (524)
Q Consensus 317 vG~~~F~~~lr~Yl~~~~~~s~~t~df~~~l~~~~~~~~~~~~~~~ 362 (524)
.|. .|-+-|..=+.+..| .+++||..+. |+++...|+.
T Consensus 167 ~~~-gfV~~LN~~m~~~~y---~~~~~~~~l~----G~~v~~LW~e 204 (205)
T PF04450_consen 167 YGK-GFVRRLNEAMRRDKY---SSDDFWKELL----GKPVDELWAE 204 (205)
T ss_pred cCc-cHHHHHHHHHhhCCC---CcHhHHHHHH----CcCHHHHHhh
Confidence 654 466666666666666 6677776664 5556666653
No 15
>PF10023 DUF2265: Predicted aminopeptidase (DUF2265); InterPro: IPR014553 This group represents a predicted aminopeptidase.
Probab=65.98 E-value=5.1 Score=41.34 Aligned_cols=41 Identities=15% Similarity=0.272 Sum_probs=33.1
Q ss_pred CceehhHHHHHHHHHhHHHHHHHhhc-chhHHHHHHHhhhccc
Q 009853 239 GFTTYAERRIVEVVQGEDRAVLNIGI-GWRGLNEEMERFKDNL 280 (524)
Q Consensus 239 G~~ty~E~~i~~~i~~~e~ah~w~g~-~W~~L~Eg~a~~~~~~ 280 (524)
.|+-+.|-.+.+.|+| |++|+-+.. +=..+||+||+|.+..
T Consensus 156 t~l~~~~~~LA~LIfH-ELaHq~~Yv~~dt~FNEsfAtfVe~~ 197 (337)
T PF10023_consen 156 TMLRYPDGELARLIFH-ELAHQTLYVKGDTAFNESFATFVERE 197 (337)
T ss_pred cccCCCchHHHHHHHH-HHhhceeecCCCchhhHHHHHHHHHH
Confidence 5677788888899997 899988775 5556999999998754
No 16
>PF10460 Peptidase_M30: Peptidase M30; InterPro: IPR019501 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This family contains metallopeptidases belonging to MEROPS peptidase family M30 (hyicolysin family, clan MA). Hyicolysin has a zinc ion which is liganded by two histidine and one glutamate residue.
Probab=63.65 E-value=66 Score=33.80 Aligned_cols=114 Identities=18% Similarity=0.186 Sum_probs=72.3
Q ss_pred HHHHHHHhHHHHHHH-hh-----cc-h--hH--HHHHHHhhhcccccCcccccC------------------CCCC----
Q 009853 247 RIVEVVQGEDRAVLN-IG-----IG-W--RG--LNEEMERFKDNLECTKLKTNQ------------------EGLD---- 293 (524)
Q Consensus 247 ~i~~~i~~~e~ah~w-~g-----~~-W--~~--L~Eg~a~~~~~~~~~~L~~~~------------------~~~~---- 293 (524)
.++..|.| |+.||- |. .+ . .+ |||+++..++++.-.++.+.. .+.+
T Consensus 138 ~~~sTlAH-EfQHmInfy~~~v~~g~~~~~dtWLnE~lS~~aEdl~s~~~~~~~n~i~d~R~~~y~~~~~~~~~~~l~~w 216 (366)
T PF10460_consen 138 TVYSTLAH-EFQHMINFYQRGVLHGKQYAMDTWLNEMLSMSAEDLYSSKIDPGYNNIRDSRIPYYNNYTSGNYNCSLTAW 216 (366)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHhcCCCcccccHHHHHHHHHHHHHHhcCCCcccCccccccHHHHhhccccCCCcceeec
Confidence 35666666 899963 32 11 1 12 999999988876433331100 0000
Q ss_pred cCCCCCCCccchhHHHHHHHHHhhChhHHHHHHHHHHHHhCCCCCCHHHHHHHHHhhC-CCCchhHHHHHhhcCC
Q 009853 294 PDDVYSQVPYEKGFQFLWRIERQIGRPAFDEFIKKYIATFKFKSIDTETFLNFLKENV-PGIEKQIDLELWTEGT 367 (524)
Q Consensus 294 pd~~fs~i~Y~KGa~~L~mLe~~vG~~~F~~~lr~Yl~~~~~~s~~t~df~~~l~~~~-~~~~~~~~~~~W~~~~ 367 (524)
....-+...|....+|..+|.+..|.+.|++-|. .. ...+.++..+...+.+ ++......+..|.-.-
T Consensus 217 ~~~g~~l~sYs~s~~Fg~~L~rQ~G~~~~~~~l~----~~--~~tds~avl~aa~~~~~~~~sf~~~l~~w~~A~ 285 (366)
T PF10460_consen 217 SSFGDSLASYSSSYSFGAYLYRQYGGDFYKKLLT----NS--SSTDSEAVLDAAIKQAGPGNSFGELLRRWGVAL 285 (366)
T ss_pred CCCccccccchhHHHHHHHHHHHcChHHHHHHHh----cC--CCCcHHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 1122345689999999999999999877655553 21 3467888777776544 4667888899998776
No 17
>COG4324 Predicted aminopeptidase [General function prediction only]
Probab=44.70 E-value=14 Score=36.62 Aligned_cols=34 Identities=12% Similarity=0.083 Sum_probs=25.1
Q ss_pred HHHHHHHhHHHHHHHhhcc-hhHHHHHHHhhhcccc
Q 009853 247 RIVEVVQGEDRAVLNIGIG-WRGLNEEMERFKDNLE 281 (524)
Q Consensus 247 ~i~~~i~~~e~ah~w~g~~-W~~L~Eg~a~~~~~~~ 281 (524)
.|...|+| |+|||-+... =...||+|+++.+...
T Consensus 196 ~lA~LIFH-ELAHQk~Y~~~DtAFNEsFAtaVEt~G 230 (376)
T COG4324 196 YLASLIFH-ELAHQKIYVNNDTAFNESFATAVETSG 230 (376)
T ss_pred HHHHHHHH-HHhhheEeecCcchHhHHHHHHHHHHh
Confidence 44555565 8999998854 3449999999988643
No 18
>TIGR02411 leuko_A4_hydro leukotriene A-4 hydrolase/aminopeptidase. Members of this family represent a distinctive subset within the zinc metallopeptidase family M1 (pfam01433). The majority of the members of pfam01433 are aminopeptidases, but the sequences in this family for which the function is known are leukotriene A-4 hydrolase. A dual epoxide hydrolase and aminopeptidase activity at the same active site is indicated. The physiological substrate for aminopeptidase activity is not known.
Probab=34.13 E-value=51 Score=37.15 Aligned_cols=39 Identities=38% Similarity=0.664 Sum_probs=33.8
Q ss_pred CceehhHHHHHHHHHhHHHHHHHhhcchhHHHHHHHhhh
Q 009853 239 GFTTYAERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFK 277 (524)
Q Consensus 239 G~~ty~E~~i~~~i~~~e~ah~w~g~~W~~L~Eg~a~~~ 277 (524)
||++|.|+++++.+.|++.+++..-.+|..|.+.+..+.
T Consensus 309 Gfaty~e~~~~~~~~~e~~~~~~~~~~~~~l~~~~~~~~ 347 (601)
T TIGR02411 309 GWTVYLERRIVGRLYGEKTRHFSALIGWGELQESVKTLG 347 (601)
T ss_pred hHHHHHHHHHHHHhcCcHHHHHHHHHhHHHHHHHHHhhc
Confidence 999999999999999988777777678988888887765
No 19
>PF07607 DUF1570: Protein of unknown function (DUF1570); InterPro: IPR011464 This entry represents hypothetical proteins confined to bacteria.
Probab=33.93 E-value=35 Score=30.33 Aligned_cols=30 Identities=7% Similarity=0.125 Sum_probs=21.5
Q ss_pred HHHHhHHHHHHHhhc-----------chhHHHHHHHhhhccccc
Q 009853 250 EVVQGEDRAVLNIGI-----------GWRGLNEEMERFKDNLEC 282 (524)
Q Consensus 250 ~~i~~~e~ah~w~g~-----------~W~~L~Eg~a~~~~~~~~ 282 (524)
+.+.| |.+||-.-+ -| +.||||+|+|...+
T Consensus 3 ~T~~H-Ea~HQl~~N~Gl~~r~~~~P~W--v~EGlA~yFE~~~~ 43 (128)
T PF07607_consen 3 ATIAH-EATHQLAFNTGLHPRLADWPRW--VSEGLATYFETPGM 43 (128)
T ss_pred hHHHH-HHHHHHHHHccccccCCCCchH--HHHhHHHHcCCCcc
Confidence 45565 799986542 23 99999999986544
No 20
>PF09836 DUF2063: Uncharacterized protein conserved in bacteria (DUF2063); InterPro: IPR018640 This entry contains proteins that have no known function. ; PDB: 3DEE_A.
Probab=32.17 E-value=26 Score=29.00 Aligned_cols=31 Identities=23% Similarity=0.469 Sum_probs=22.3
Q ss_pred HHHhhChhHHHHHHHHHHHHhCCCCCCHHHH
Q 009853 313 IERQIGRPAFDEFIKKYIATFKFKSIDTETF 343 (524)
Q Consensus 313 Le~~vG~~~F~~~lr~Yl~~~~~~s~~t~df 343 (524)
++.+||++.|++..+.|+.++--.+-+-.++
T Consensus 55 ~~~llG~~~f~~la~~y~~~~p~~s~~l~~~ 85 (94)
T PF09836_consen 55 VRALLGEEFFDALARAYIRAHPSRSPDLNDY 85 (94)
T ss_dssp GGGGS-HHHHHHHHHHHHHSGGGG-S-GGGH
T ss_pred HHHHhCHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence 4678999999999999999987665554433
No 21
>PF15641 Tox-MPTase5: Metallopeptidase toxin 5
Probab=20.49 E-value=1.5e+02 Score=24.36 Aligned_cols=27 Identities=19% Similarity=0.282 Sum_probs=20.7
Q ss_pred CceehhHHHHH-HHHHhHHHHHHHhhcc
Q 009853 239 GFTTYAERRIV-EVVQGEDRAVLNIGIG 265 (524)
Q Consensus 239 G~~ty~E~~i~-~~i~~~e~ah~w~g~~ 265 (524)
|+-.|..|..+ ..|+|||+-|-||.-+
T Consensus 54 g~~~f~sra~lr~~iiheelhhrw~~rg 81 (109)
T PF15641_consen 54 GFNSFSSRAELRNTIIHEELHHRWWKRG 81 (109)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 77777777665 5788999999888744
No 22
>PF11266 DUF3066: Protein of unknown function (DUF3066); InterPro: IPR022612 This cyanobacterial family of fatty aldehyde decarbonylases acts on mainly C16 and C18 substrates to form hydrocarbons and carbon monoxide []. Note that the corresponding EC number (4.1.99.5 from EC) dating from 1989 refers to a nonorthologous Pisum sativum enzyme that acts on C18 and longer chains and attaches the overly narrow narrow name octadecanal decarbonylase. ; PDB: 2OC5_A.
Probab=20.16 E-value=1.2e+02 Score=28.49 Aligned_cols=32 Identities=34% Similarity=0.556 Sum_probs=25.6
Q ss_pred HHHHHHHHHhHHHHHHHhhcchhHHHHHHHhhhc
Q 009853 245 ERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFKD 278 (524)
Q Consensus 245 E~~i~~~i~~~e~ah~w~g~~W~~L~Eg~a~~~~ 278 (524)
.|+|.+-+.-.|..|+.||-.| |++.|++-.+
T Consensus 123 ARkITegVVkDEy~HLNfGe~W--Lk~~f~~~k~ 154 (219)
T PF11266_consen 123 ARKITEGVVKDEYTHLNFGEEW--LKANFEQSKA 154 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHhcchHHHH--HHHHHHHHHH
Confidence 3678888888899999999988 7777766544
Done!