BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009854
(524 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 160/522 (30%), Positives = 251/522 (48%), Gaps = 46/522 (8%)
Query: 8 CSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYN-VSIHWHGVRQLRTCWADGPAYI 66
C+ ++ +NG FPGPTI A D+V+V++ N + V IHWHG+ Q T WADG A I
Sbjct: 19 CNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASI 78
Query: 67 TQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLR-ATVHGAIVILPKRGVPYPFPKPHKE 125
+QC I PG+ + YNFT+ GT ++H H+ R A ++G++++ P +G PF E
Sbjct: 79 SQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGE 136
Query: 126 VTVILSEWWKSDVEAV-----------INEAL------KSGLAPNVSDAHTINGHPGPLS 168
+ ++LS+WW + I E + +++ + N P L
Sbjct: 137 INLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLK 196
Query: 169 SCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLI 228
S + V KTY +R+ + L F I H+L VVE D YV+PF T + I
Sbjct: 197 GSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDI 256
Query: 229 APGQTTNVLLSA-AHATGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVP 287
G++ +VL++ + + Y V+ + T A + ++Y P
Sbjct: 257 YSGESYSVLITTDQNPSENYWVS----VGTRARHPNTPPGLTLLNYLPNSVSKLPTS--P 310
Query: 288 PPRNATPVAANFTASLR---SLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVV 344
PP+ TP +F S + + + P+K + +F +N +NG V
Sbjct: 311 PPQ--TPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFL-----LN-TQNVING-YVK 361
Query: 345 ADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNP-PVTYNFTGTQPANFQTNNGTRIYR 403
IN+V+ +P L A + + F + P P Y+ T P N +T G +Y+
Sbjct: 362 WAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDID-TPPTNEKTRIGNGVYQ 420
Query: 404 LPYNSTVQLVLQDTGMIAP---ENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVE 460
V ++LQ+ M+ E HP HLHG +F+ +G G G F+++++ NL +P
Sbjct: 421 FKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEE-SSLNLKNPPL 479
Query: 461 RNTIGVPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAF 502
RNT+ + GWTAIRF ADNPGVW HCH+E H G+ + F
Sbjct: 480 RNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF 521
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 476 FRADNPGVWFMHCHLEVHTTWGLKMAFIVDNGKGPNE 512
F DNPG +F H HL + + GL + IVD +G E
Sbjct: 93 FTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKE 129
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 148/506 (29%), Positives = 224/506 (44%), Gaps = 68/506 (13%)
Query: 11 KPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKY-NVSIHWHGVRQLRTCWADGPAY 65
+ + VNG FP P I ++ D + VV NH + SIHWHG Q T WADGPA+
Sbjct: 22 RDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAF 81
Query: 66 ITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT-VHGAIVIL-PKRGVPYPFPKPH 123
+ QCPI G +++Y+F + Q GT W+H+H+ + G V+ PK + +
Sbjct: 82 VNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPKDPHASRYDVDN 141
Query: 124 KEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESG 183
+ + L++W+ + A P +DA ING G +S P+ + V+ G
Sbjct: 142 ESTVITLTDWYHT-------AARLGPRFPLGADATLINGL-GRSASTPTAALAVINVQHG 193
Query: 184 KTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHA 243
K Y RL++ + + F I GH LTV+EVD +P +++ I Q + +L+A
Sbjct: 194 KRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQT 253
Query: 244 TGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAANFTASL 303
G Y + A+P T + +A + Y P T V +L
Sbjct: 254 VGNYWIRANPNFGT--VGFAGGINSAILRYQGAPVAE------PTTTQTTSVIPLIETNL 305
Query: 304 RSLNSKKYPAR-VPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQA 362
L P P +D +L L N NG+ INN +F PT+ +L
Sbjct: 306 HPLARMPVPGSPTPGGVDKAL----NLAFN-----FNGTNFF--INNASFTPPTVPVL-- 352
Query: 363 HFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAP 422
+I +G Q A G+ +Y LP +ST+++ L T +
Sbjct: 353 --LQI-----------------LSGAQTAQDLLPAGS-VYPLPAHSTIEITLPATALAPG 392
Query: 423 ENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTI--GVPSGGW-TAIRFRAD 479
HP HLHG + F V R G+ +N DP+ R+ + G P+ G IRF+ D
Sbjct: 393 APHPFHLHG-HAFAVVRSAGS-------TTYNYNDPIFRDVVSTGTPAAGDNVTIRFQTD 444
Query: 480 NPGVWFMHCHLEVHTTWGLKMAFIVD 505
NPG WF+HCH++ H G + F D
Sbjct: 445 NPGPWFLHCHIDFHLEAGFAIVFAED 470
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 227/509 (44%), Gaps = 69/509 (13%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-----YNVSIHWHGVRQLRTCWADGPA 64
T+ V NG FPGP I + D + V++++ +IHWHG+ Q T WADGPA
Sbjct: 21 TRAAVVANGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWHGLFQHGTNWADGPA 80
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT-VHGAIVILPKRGVPYPFPKPH 123
++ QCPI G +++Y+FT+ Q GT W+H+H+ + G +V+
Sbjct: 81 FVNQCPIASGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYDPSDPYASMYDVD 140
Query: 124 KEVTVI-LSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVES 182
+ TVI LS+W+ + + L PN +D+ ING G + + + VE
Sbjct: 141 DDTTVITLSDWYHTAAK------LGPAFPPN-ADSVLINGL-GRFAGGNASDLAVITVEQ 192
Query: 183 GKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAH 242
K Y RL++ + + F I GH +T++EVD +P + +++ I Q + +L+A
Sbjct: 193 NKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFASQRYSFVLNATQ 252
Query: 243 ATGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAANFTAS 302
+ Y + A P +T I +A + Y V P NAT T+
Sbjct: 253 SVDNYWIRAIP--NTGTIDTTGGLNSAILRY-------SGADIVDPTANAT------TSV 297
Query: 303 LRSLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQA 362
+ + + P P + + L +N NG+ INN T + PT+ +L
Sbjct: 298 IPLVETDLVPLDSPAAPGDPVVGGVDLAMN-LDFSFNGTNFF--INNETLIPPTVPVL-- 352
Query: 363 HFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAP 422
+I +G Q A+ G+ +Y LP NST++L T +
Sbjct: 353 --LQI-----------------LSGAQSASDLLPTGS-VYTLPLNSTIELSFPITTVNGV 392
Query: 423 EN-----HPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPS-GGWTAIRF 476
N HP HLHG + F V R G+ +N V+PV R+T+ + G IRF
Sbjct: 393 TNAPGAPHPFHLHG-HAFSVVRSAGS-------SDYNYVNPVRRDTVSTGNPGDNVTIRF 444
Query: 477 RADNPGVWFMHCHLEVHTTWGLKMAFIVD 505
DN G WF+HCH++ H G + F D
Sbjct: 445 TTDNAGPWFLHCHIDFHLEAGFAIVFAED 473
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 228/511 (44%), Gaps = 76/511 (14%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-----YNVSIHWHGVRQLRTCWADGPA 64
++ V VNG PGP I + D + V+N++ + S+HWHG Q T WADGPA
Sbjct: 21 SRDAVVVNGGTPGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWHGFFQKGTNWADGPA 80
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHAHI--LWLRATVHGAIVILPKRGVPYPFPKP 122
++ QCPI G +++Y+F+ Q GT W+H+H+ + +V P +
Sbjct: 81 FVNQCPIAAGSSFLYDFSTPIQAGTFWYHSHLSTQYCDGDRGPFVVYDPNDPSANLYDVD 140
Query: 123 HKEVTVILSEWWKSDVEAVINEALKSGLA-PNVSDAHTINGHPGPLSSCPSQGGFKLPVE 181
+ + L++W+ + A ++G A P +DA ING G S PS + V
Sbjct: 141 NLNTVITLTDWYHT--------AAQNGPAKPGGADATLINGQ-GRGPSSPSADLAVISVT 191
Query: 182 SGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAA 241
+GK Y RL++ + + F I GH++T+++VD+ V+P + I Q + +L+A
Sbjct: 192 AGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQRYSFILNAN 251
Query: 242 HATGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAANFTA 301
A Y + A+P + + N +A + Y AT + T+
Sbjct: 252 QAVNNYWIRANP--NQGNVGFTNGINSAILRYSGAA--------------ATQPTTSQTS 295
Query: 302 SLRSLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQ 361
S++ L+ H L AT V GS V +N +++ Q
Sbjct: 296 SVQPLDQTNL---------HPL----------TATAVPGSPVAGGVN--------LAINQ 328
Query: 362 AHFFKIGGVFTDDFPGNPP----VTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDT 417
A F F D PP ++ +G Q A +G +Y LP ++ +++ T
Sbjct: 329 AFNFNGTNHFVDGASFVPPTVPVLSQIVSGAQSAADLLASG-LVYSLPSDANIEISFPAT 387
Query: 418 GMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTI--GVPSGGWT-AI 474
A HP HLHG + F V R G+ +N DP+ R+T+ G P+ I
Sbjct: 388 SAAAGGPHPFHLHG-HAFAVVRSAGS-------TTYNYNDPIFRDTVSTGTPAANDNVTI 439
Query: 475 RFRADNPGVWFMHCHLEVHTTWGLKMAFIVD 505
RF+ +NPG WF+HCH++ H G + F D
Sbjct: 440 RFKTNNPGPWFLHCHIDFHLEAGFAVVFAQD 470
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 217/511 (42%), Gaps = 79/511 (15%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-----YNVSIHWHGVRQLRTCWADGPA 64
++ + VN FP P I + D + V++++ + SIHWHG Q T WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT-VHGAIVILPKRGVPYPFPKPH 123
++ QCPI G ++Y+F + Q GT W+H+H+ + G IV+ Y PH
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVV-------YDPQDPH 133
Query: 124 KEV--------TVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGG 175
K + + L++W+ + A K G +DA ING + + +
Sbjct: 134 KSLYDVDDDSTVITLADWY--------HLAAKVGSPVPTADATLINGLGRSIDTLNADLA 185
Query: 176 FKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTN 235
+ V GK Y RL++ + + F I GH LTV+E D+ +KP +++ I Q +
Sbjct: 186 V-ITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQRYS 244
Query: 236 VLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPV 295
+L+A G Y + A P T D +A + Y P + P+
Sbjct: 245 FVLNADQDVGNYWIRALPNSGTRNF--DGGVNSAILRYDGAAPVEPTTSQTP---STNPL 299
Query: 296 AANFTASLRSLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMP 355
+ +L + PA P +D +L G G + IN +F P
Sbjct: 300 VESALTTLEGTAAPGSPA--PGGVDLALNMAFGFA---------GGKFT--INGASFTPP 346
Query: 356 TISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQ 415
T+ +L +I +G Q A +G+ +Y LP N+ +++ L
Sbjct: 347 TVPVL----LQI-----------------LSGAQSAQDLLPSGS-VYSLPANADIEISLP 384
Query: 416 DTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPS-GGWTAI 474
T HP HLHG F V R G+ +N +PV R+ + S G I
Sbjct: 385 ATAAAPGFPHPFHLHGHT-FAVVRSAGS-------STYNYENPVYRDVVSTGSPGDNVTI 436
Query: 475 RFRADNPGVWFMHCHLEVHTTWGLKMAFIVD 505
RFR DNPG WF+HCH++ H G + D
Sbjct: 437 RFRTDNPGPWFLHCHIDFHLEAGFAVVMAED 467
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 153/509 (30%), Positives = 217/509 (42%), Gaps = 74/509 (14%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-----YNVSIHWHGVRQLRTCWADGPA 64
T+ + VNG GP I ++D + VVN + SIHWHG+ Q T WADG
Sbjct: 22 TRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGAD 80
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHAHI-LWLRATVHGAIVILPKRGVPYPFPKPH 123
+ QCPI PG ++Y FT AG GT W+H+H + G +VI
Sbjct: 81 GVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDED 140
Query: 124 KEVTVI-LSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVES 182
E T+I L++W+ ++ A DA ING G P+ + VE
Sbjct: 141 DENTIITLADWYHIPAPSIQGAAQP--------DATLINGK-GRYVGGPAAELSIVNVEQ 191
Query: 183 GKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAH 242
GK Y +RLI+ + + F I GH+LT++EVD +P + + I GQ + +L A
Sbjct: 192 GKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQ 251
Query: 243 ATGKYLVAASP--FLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAANFT 300
Y + A P + A N +A + Y P +A P A
Sbjct: 252 PVDNYWIRAQPNKGRNGLAGTFANGVNSAILRY-------AGAANADPTTSANPNPAQLN 304
Query: 301 -ASLRSLNSKKYPA-RVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTI- 357
A L +L P P D +L F +G +G R IN + P++
Sbjct: 305 EADLHALIDPAAPGIPTPGAADVNLRFQLGF---------SGGRFT--INGTAYESPSVP 353
Query: 358 SLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDT 417
+LLQ +G Q AN G+ +Y LP N V+LV+
Sbjct: 354 TLLQI----------------------MSGAQSANDLLPAGS-VYELPRNQVVELVVPAG 390
Query: 418 GMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVP-SGGWTAIRF 476
+ P HP HLHG + F V R G+ +N V+PV+R+ + + +G IRF
Sbjct: 391 VLGGP--HPFHLHG-HAFSVVRSAGS-------STYNFVNPVKRDVVSLGVTGDEVTIRF 440
Query: 477 RADNPGVWFMHCHLEVHTTWGLKMAFIVD 505
DNPG WF HCH+E H GL + F D
Sbjct: 441 VTDNPGPWFFHCHIEFHLMNGLAIVFAED 469
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 153/509 (30%), Positives = 217/509 (42%), Gaps = 74/509 (14%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-----YNVSIHWHGVRQLRTCWADGPA 64
T+ + VNG GP I ++D + VVN + SIHWHG+ Q T WADG
Sbjct: 22 TRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGAD 80
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHAHI-LWLRATVHGAIVILPKRGVPYPFPKPH 123
+ QCPI PG ++Y FT AG GT W+H+H + G +VI
Sbjct: 81 GVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDED 140
Query: 124 KEVTVI-LSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVES 182
E T+I L++W+ ++ A DA ING G P+ + VE
Sbjct: 141 DENTIITLADWYHIPAPSIQGAAQP--------DATLINGK-GRYVGGPAAELSIVNVEQ 191
Query: 183 GKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAH 242
GK Y +RLI+ + + F I GH+LT++EVD +P + + I GQ + +L A
Sbjct: 192 GKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQ 251
Query: 243 ATGKYLVAASP--FLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAANFT 300
Y + A P + A N +A + Y P +A P A
Sbjct: 252 PVDNYWIRAQPNKGRNGLAGTFANGVNSAILRY-------AGAANADPTTSANPNPAQLN 304
Query: 301 -ASLRSLNSKKYPA-RVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTI- 357
A L +L P P D +L F +G +G R IN + P++
Sbjct: 305 EADLHALIDPAAPGIPTPGAADVNLRFQLGF---------SGGRFT--INGTAYESPSVP 353
Query: 358 SLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDT 417
+LLQ +G Q AN G+ +Y LP N V+LV+
Sbjct: 354 TLLQI----------------------MSGAQSANDLLPAGS-VYELPRNQVVELVVPAG 390
Query: 418 GMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVP-SGGWTAIRF 476
+ P HP HLHG + F V R G+ +N V+PV+R+ + + +G IRF
Sbjct: 391 VLGGP--HPFHLHG-HAFSVVRSAGS-------STYNFVNPVKRDVVSLGVTGDEVTIRF 440
Query: 477 RADNPGVWFMHCHLEVHTTWGLKMAFIVD 505
DNPG WF HCH+E H GL + F D
Sbjct: 441 VTDNPGPWFFHCHIEFHLMNGLAIVFAED 469
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/505 (27%), Positives = 210/505 (41%), Gaps = 67/505 (13%)
Query: 11 KPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNV-----SIHWHGVRQLRTCWADGPAY 65
+ + VN FP P I D + +VN + + SIHWHG Q T WADGPA+
Sbjct: 22 RAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPAF 81
Query: 66 ITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT-VHGAIVILPKRGVPYPFPKPHK 124
I QCPI G +++Y+F + GQ GT W+H+H+ + G V+
Sbjct: 82 INQCPIASGNSFLYDFQVPGQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHANLYDVDD 141
Query: 125 EVTVI-LSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESG 183
E TVI L++W+ V A + G +D+ ING G +S P+ + V G
Sbjct: 142 ESTVITLADWYH--VAAKLGPRFPKG-----ADSTLINGL-GRSTSTPTADLAVISVTKG 193
Query: 184 KTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHA 243
K Y RL++ + + F I H+LTV+E D +P +++ I Q + +L+A
Sbjct: 194 KRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSFVLNANQD 253
Query: 244 TGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAANFTASL 303
Y + A+P T + +A + Y V P N T L
Sbjct: 254 VDNYWIRANPNFGTTGFA--DGVNSAILRY-------DDADPVEPVTNQTGTTLLLETDL 304
Query: 304 RSLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAH 363
L S P P + L + + +NG +F PT+ +L
Sbjct: 305 HPLTSMPVPGN-PTQGGADLNLNMAFNFDGTNFFINGE---------SFTPPTVPVL--- 351
Query: 364 FFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPE 423
+I +G A +G+ +Y LP NS++++ T
Sbjct: 352 -LQI-----------------ISGANTAQDLLPSGS-VYSLPSNSSIEITFPATTAAPGA 392
Query: 424 NHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTI--GVPSGGWT-AIRFRADN 480
HP HLHG + F V R G+ +N DPV R+ + G P G IRF+ DN
Sbjct: 393 PHPFHLHG-HVFAVVRSAGS-------TSYNYDDPVWRDVVSTGTPQAGDNVTIRFQTDN 444
Query: 481 PGVWFMHCHLEVHTTWGLKMAFIVD 505
PG WF+HCH++ H G + D
Sbjct: 445 PGPWFLHCHIDFHLDAGFAVVMAED 469
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 214/524 (40%), Gaps = 97/524 (18%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYN-VSIHWHGVRQLRTCWADGPAYITQ 68
T+ +T NG PGP I+A D +++ V N++++N SIHWHG+RQL + DG +TQ
Sbjct: 85 TRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQ 144
Query: 69 CPIQPGQNYIYNFTLAGQRGTLWWHAHI-LWLRATVHGAIVILPKRGVPYPFPKPHKEVT 127
CPI PG Y F + Q GT W+H+H L + G ++I Y ++V
Sbjct: 145 CPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPLIINGPATADY-----DEDVG 198
Query: 128 VILSEWWKSDVEAVINEALKSGLAPNVSDA-----HTINGHPGPLSSCPSQGG-FKLPVE 181
VI + W + I + + G P + + +T + +C G F+L
Sbjct: 199 VIFLQDWAHESVFEIWDTARLGAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFV 258
Query: 182 SGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAA 241
G Y LRLIN ++ F I H LTV+ D + P+ TT+ LL
Sbjct: 259 EGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPY-----------TTDTLLIGI 307
Query: 242 HATGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAANFTA 301
+V A+ D I + T +T + AAN T
Sbjct: 308 GQRYDVIVEANAAADNYWIRGNWGTTCSTNNE----------------------AANATG 345
Query: 302 SLRSLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQ 361
LR +S S+ +G P TC + P SL+
Sbjct: 346 ILRYDSS-------------SIANPTSVGTTPRGTCED--------------EPVASLVP 378
Query: 362 AHFFKIGGVFTDDFPGNPPVTYNFTGT-----------QPANFQTNNGTRIYRLPYNST- 409
+GG D + T FT T P + N I+ YN
Sbjct: 379 HLALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVA 438
Query: 410 ----------VQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPV 459
V V++D HP+HLHG +FF V + FNS + P KFNLV+P
Sbjct: 439 LEQTNANEEWVVYVIEDLTGFGIW-HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPP 497
Query: 460 ERNTIGVPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFI 503
R+ +P G+ AI F+ DNPG W +HCH+ H + GL M F+
Sbjct: 498 RRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFV 541
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/505 (27%), Positives = 215/505 (42%), Gaps = 67/505 (13%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-----YNVSIHWHGVRQLRTCWADGPA 64
++ + VN FP P I + D + V++++ + SIHWHG Q T WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT-VHGAIVILPKRGVPYPFPKPH 123
++ QCPI G ++Y+F + Q GT W+H+H+ + G IV+
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPNDPHASLYDVD 140
Query: 124 KEVTVI-LSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVES 182
+ TVI L++W+ + A K G +DA ING G ++ + + V
Sbjct: 141 DDSTVITLADWY--------HLAAKVGAPVPTADATLINGL-GRSAATLAADLAVITVTK 191
Query: 183 GKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAH 242
GK Y RL++ + + F I GH LTV+E D+ +KP +++ I Q + +L+A
Sbjct: 192 GKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQ 251
Query: 243 ATGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAANFTAS 302
Y + A P T T +A + Y P + P+ + +
Sbjct: 252 DVDNYWIRALPNSGTQNFA--GGTNSAILRYDGAAPVEPTTSQTP---STNPLVESALTT 306
Query: 303 LRSLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQA 362
L+ + P P +D +L G G IN +F PT+ +L
Sbjct: 307 LKGTAAPGSP--TPGGVDLALNMAFGFA---------GGNFT--INGASFTPPTVPVL-- 351
Query: 363 HFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAP 422
+I +G Q A G+ +Y LP N+ +++ L T
Sbjct: 352 --LQI-----------------LSGAQSAADLLPAGS-VYSLPANADIEISLPATAAAPG 391
Query: 423 ENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTI--GVPSGGWTAIRFRADN 480
HP HLHG + F V R G+ +N +PV R+ + G P G IRFR DN
Sbjct: 392 FPHPFHLHG-HVFAVVRSAGS-------STYNYANPVYRDVVSTGAP-GDNVTIRFRTDN 442
Query: 481 PGVWFMHCHLEVHTTWGLKMAFIVD 505
PG WF+HCH++ H G + D
Sbjct: 443 PGPWFLHCHIDFHLEAGFAVVMAED 467
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/505 (27%), Positives = 215/505 (42%), Gaps = 67/505 (13%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-----YNVSIHWHGVRQLRTCWADGPA 64
++ + VN FP P I + D + V++++ + SIHWHG Q T WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT-VHGAIVILPKRGVPYPFPKPH 123
++ QCPI G ++Y+F + Q GT W+H+H+ + G IV+
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPNDPHASLYDVD 140
Query: 124 KEVTVI-LSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVES 182
+ TVI L++W+ + A K G +DA ING G ++ + + V
Sbjct: 141 DDSTVITLADWY--------HLAAKVGAPVPTADATLINGL-GRSAATLAADLAVITVTK 191
Query: 183 GKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAH 242
GK Y RL++ + + F I GH LTV+E D+ +KP +++ I Q + +L+A
Sbjct: 192 GKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQ 251
Query: 243 ATGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAANFTAS 302
Y + A P T T +A + Y P + P+ + +
Sbjct: 252 DVDNYWIRALPNSGTQNFA--GGTNSAILRYDGAAPVEPTTSQTP---STNPLVESALTT 306
Query: 303 LRSLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQA 362
L+ + P P +D +L G G IN +F PT+ +L
Sbjct: 307 LKGTAAPGSP--TPGGVDLALNMAFGFA---------GGNFT--INGASFTPPTVPVL-- 351
Query: 363 HFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAP 422
+I +G Q A G+ +Y LP N+ +++ L T
Sbjct: 352 --LQI-----------------LSGAQSAADLLPAGS-VYSLPANADIEISLPATAAAPG 391
Query: 423 ENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTI--GVPSGGWTAIRFRADN 480
HP HLHG + F V R G+ +N +PV R+ + G P G IRFR DN
Sbjct: 392 FPHPFHLHG-HVFAVVRSAGS-------STYNYANPVYRDVVSTGAP-GDNVTIRFRTDN 442
Query: 481 PGVWFMHCHLEVHTTWGLKMAFIVD 505
PG WF+HCH++ H G + D
Sbjct: 443 PGPWFLHCHIDFHLEAGFAVVMAED 467
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 147/524 (28%), Positives = 214/524 (40%), Gaps = 97/524 (18%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYN-VSIHWHGVRQLRTCWADGPAYITQ 68
T+ +T NG PGP I+A D +++ V N++++N SIHWHG+RQL + DG +TQ
Sbjct: 85 TRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQ 144
Query: 69 CPIQPGQNYIYNFTLAGQRGTLWWHAHI-LWLRATVHGAIVILPKRGVPYPFPKPHKEVT 127
CPI PG Y F + Q GT W+H+H L + G ++I Y ++V
Sbjct: 145 CPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPLIINGPATADY-----DEDVG 198
Query: 128 VILSEWWKSDVEAVINEALKSGLAPNVSDA-----HTINGHPGPLSSCPSQGG-FKLPVE 181
VI + W + I + + G P + + +T + +C G F+L
Sbjct: 199 VIFLQDWAHESVFEIWDTARLGAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFV 258
Query: 182 SGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAA 241
G Y LRLIN ++ F I H LTV+ D + P+ TT+ LL
Sbjct: 259 EGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPY-----------TTDTLLIGI 307
Query: 242 HATGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAANFTA 301
+V A+ D I + T +T + AAN T
Sbjct: 308 GQRYDVIVEANAAADNYWIRGNWGTTCSTNNE----------------------AANATG 345
Query: 302 SLRSLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQ 361
LR +S S+ +G P TC + P SL+
Sbjct: 346 ILRYDSS-------------SIANPTSVGTTPRGTCED--------------EPVASLVP 378
Query: 362 AHFFKIGGVFTDDFPGNPPVTYNFTGT-----------QPANFQTNNGTRIYRLPYNST- 409
+GG D + T FT T P + N I+ YN
Sbjct: 379 HLALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVA 438
Query: 410 ----------VQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPV 459
V V++D HP+HLHG +FF V + FNS + P KFNLV+P
Sbjct: 439 LEQTNANEEWVVYVIEDLTGFGIW-HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPP 497
Query: 460 ERNTIGVPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFI 503
R+ +P G+ AI F+ DNPG W +HCH+ H + G+ M F+
Sbjct: 498 RRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGMAMQFV 541
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 144/505 (28%), Positives = 214/505 (42%), Gaps = 67/505 (13%)
Query: 11 KPIVTVNGYFPGPTIVAREDDTVLVKVVNHV-----KYNVSIHWHGVRQLRTCWADGPAY 65
+ VT G P I DD + V++ + + SIHWHG Q T DGPA+
Sbjct: 43 RSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAF 102
Query: 66 ITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT-VHGAIVILPKRGVPYPFPKPHK 124
+ QCPI P ++++Y+F + GQ GT W+H+H+ + GA V+
Sbjct: 103 VNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDD 162
Query: 125 EVTVI-LSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFK-LPVES 182
TVI +++W+ S + K+ A D ING G S+ PS G + V+S
Sbjct: 163 ASTVITIADWYHSLSTVLFPNPNKAPPA---PDTTLINGL-GRNSANPSAGQLAVVSVQS 218
Query: 183 GKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAH 242
GK Y R+++ + F I GH++TV+EVD +P +++ I GQ +V++ A
Sbjct: 219 GKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQ 278
Query: 243 ATGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAANFTAS 302
A G Y + A+P N T P + A A+
Sbjct: 279 AVGNYWIRANP---------SNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTALNEAN 329
Query: 303 LRSLNSKKYPAR-VPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQ 361
L L + P VP D +L IG N + IN F+ PT+ +L
Sbjct: 330 LIPLINPGAPGNPVPGGADINLNLRIGR---------NATTADFTINGAPFIPPTVPVL- 379
Query: 362 AHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIA 421
+ GV T P + G + LP N +++ + G
Sbjct: 380 --LQILSGV-----------------TNPNDLLP--GGAVISLPANQVIEISIPGGG--- 415
Query: 422 PENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGW-TAIRFRADN 480
NHP HLHG N F+V R G+ +N V+PV R+ + + GG RF DN
Sbjct: 416 --NHPFHLHGHN-FDVVRTPGS-------SVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN 465
Query: 481 PGVWFMHCHLEVHTTWGLKMAFIVD 505
PG WF+HCH++ H GL + F D
Sbjct: 466 PGPWFLHCHIDWHLEAGLAVVFAED 490
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 143/511 (27%), Positives = 220/511 (43%), Gaps = 76/511 (14%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-----YNVSIHWHGVRQLRTCWADGPA 64
++ V VNG PGP + D + V++++ + SIHWHG Q T WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHAHI--LWLRATVHGAIVILPKRGVPYPFPKP 122
+I QCPI PG +++Y+F + Q GT W+H+H+ + +V P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 123 HKEVTVILSEWWKSDVEAVINEALKSG-LAPNVSDAHTINGHPGPLSSCPSQGGFKLP-- 179
+ + + L++W+ + A K G P +DA ING PS +L
Sbjct: 141 NDDTVITLADWYHT--------AAKLGPRFPGGADATLINGK----GRAPSDSVAELSVI 188
Query: 180 -VESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLL 238
V GK Y RL++ + N F I GH LT++EVD+ +P + +++ I Q + +L
Sbjct: 189 KVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVL 248
Query: 239 SAAHATGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAAN 298
A A Y + A+P + D +A + Y A N
Sbjct: 249 DANQAVDNYWIRANPNFGN--VGFDGGINSAILRYDGAP--------------AVEPTTN 292
Query: 299 FTASLRSLNSKKYPARVPLKIDHS-LFFTIGLGINPCATCVNGSRVVADINNVTFVMPTI 357
T S++ LN V + S + IN A NGS IN +FV PT+
Sbjct: 293 QTTSVKPLNEVDLHPLVSTPVPGSPSSGGVDKAIN-MAFNFNGSNFF--INGASFVPPTV 349
Query: 358 SLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDT 417
+L +I +G Q A +G+ +Y LP N+++++ T
Sbjct: 350 PVL----LQI-----------------LSGAQTAQDLLPSGS-VYVLPSNASIEISFPAT 387
Query: 418 GMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTI--GVPSGGWT-AI 474
HP HLHG F V R G+ +N +P+ R+ + G P+ G I
Sbjct: 388 AAAPGAPHPFHLHGHT-FAVVRSAGS-------TVYNYDNPIFRDVVSTGTPAAGDNVTI 439
Query: 475 RFRADNPGVWFMHCHLEVHTTWGLKMAFIVD 505
RF +NPG WF+HCH++ H G + D
Sbjct: 440 RFDTNNPGPWFLHCHIDFHLEGGFAVVMAED 470
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 143/511 (27%), Positives = 219/511 (42%), Gaps = 76/511 (14%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-----YNVSIHWHGVRQLRTCWADGPA 64
++ V VNG PGP + D + V++++ + SIHWHG Q T WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHAHI--LWLRATVHGAIVILPKRGVPYPFPKP 122
+I QCPI PG +++Y+F + Q GT W+H+H+ + +V P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 123 HKEVTVILSEWWKSDVEAVINEALKSG-LAPNVSDAHTINGHPGPLSSCPSQGGFKLP-- 179
+ + + L++W+ + A K G P +DA ING PS +L
Sbjct: 141 NDDTVITLADWYHT--------AAKLGPRFPGGADATLINGK----GRAPSDSVAELSVI 188
Query: 180 -VESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLL 238
V GK Y RL++ + N F I GH LT++EVD+ +P + +++ I Q + +L
Sbjct: 189 KVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVL 248
Query: 239 SAAHATGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAAN 298
A A Y + A+P + D +A + Y P T V
Sbjct: 249 DANQAVDNYWIRANPNFGN--VGFDGGINSAILRYDGAPAVE------PTTNQTTSVKPL 300
Query: 299 FTASLRSLNSKKYP-ARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTI 357
L L S P A +D + I + N NGS IN +FV PT+
Sbjct: 301 NEVDLHPLVSTPVPGAPSSGGVDKA----INMAFN-----FNGSNFF--INGASFVPPTV 349
Query: 358 SLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDT 417
+L +I +G Q A +G+ +Y LP N+++++ T
Sbjct: 350 PVL----LQI-----------------LSGAQTAQDLLPSGS-VYVLPSNASIEISFPAT 387
Query: 418 GMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTI--GVPSGGWT-AI 474
HP HLHG F V R G+ +N +P+ R+ + G P+ G I
Sbjct: 388 AAAPGAPHPFHLHGHT-FAVVRSAGS-------TVYNYDNPIFRDVVSTGTPAAGDNVTI 439
Query: 475 RFRADNPGVWFMHCHLEVHTTWGLKMAFIVD 505
RF +NPG WF+HCH++ H G + D
Sbjct: 440 RFDTNNPGPWFLHCHIDFHLEGGFAVVMAED 470
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 208/498 (41%), Gaps = 64/498 (12%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-YNVSIHWHGVRQLRTCWADGPAYITQ 68
++P++T NG FP P I + D V + + N + N S+H+HG+ Q T DG ++TQ
Sbjct: 21 SRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80
Query: 69 CPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVTV 128
CPI PG +YNFT+ GT W+H+H + I+ PY + +E+++
Sbjct: 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSFPYDYD---EELSL 137
Query: 129 ILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQG-GFKLPVESGKTYM 187
LSEW+ D+ + ++ S P P P + + V+ TY+
Sbjct: 138 SLSEWYH-DLVTDLTKSFMSVYNP-------TGAEPIPQNLIVNNTMNLTWEVQPDTTYL 189
Query: 188 LRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHATGKY 247
LR++N +F I H++TVVE+D + T+ + I Q VL+ + T K
Sbjct: 190 LRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKN 249
Query: 248 LVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAANFTASLRSLN 307
F DT ++ + Y P +N NF L
Sbjct: 250 FAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL-----PTQNYVDSIDNF---LDDFY 301
Query: 308 SKKYPARVPL-KIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFK 366
+ Y + DH + T+ + ++ VN A NN+T+ P + L
Sbjct: 302 LQPYEKEAIYGEPDHVI--TVDVVMDNLKNGVN----YAFFNNITYTAPKVPTL------ 349
Query: 367 IGGVFTDDFPGNPPVTYNFTGTQPANFQT-NNGTRIYRLPYNSTVQLVL--QDTGMIAPE 423
+T +G Q N + + T + L + V++VL QDTG
Sbjct: 350 --------------MTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTGT---- 391
Query: 424 NHPLHLHGFNFFEVGR------GLGNFNSKKDPKKFNLV--DPVERNTIGVPSGGWTAIR 475
HP HLHG F + R LG DP P+ R+T+ V IR
Sbjct: 392 -HPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIR 450
Query: 476 FRADNPGVWFMHCHLEVH 493
F+ADNPGVWF HCH+E H
Sbjct: 451 FKADNPGVWFFHCHIEWH 468
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 136/505 (26%), Positives = 219/505 (43%), Gaps = 74/505 (14%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNV-----SIHWHGVRQLRTCWADGPA 64
++ V VNG PGP + D + V++++ + S+HWHG Q T WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT-VHGAIVIL-PKRGVPYPFPKP 122
+I QCPI PG +++Y+F + Q GT W+H+H+ + G V+ P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 123 HKEVTVILSEWWKSDVEAVINEALKSGLA-PNVSDAHTINGHPGPLSSCPSQGGFKLPVE 181
+ + T+ L++W+ + A K G A PN +D+ ING PS +L V
Sbjct: 141 NDDTTITLADWYHT--------AAKLGPAFPNGADSTLINGK----GRAPSDSSAQLSVV 188
Query: 182 S---GKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLL 238
S GK RL++ + + F I GH T++E D+ +P T+++ I Q + L
Sbjct: 189 SVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYSFTL 248
Query: 239 SAAHATGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAAN 298
+A A Y + A+P + + +A + Y A N
Sbjct: 249 NANQAVDNYWIRANPNFGN--VGFNGGINSAILRYDGAP--------------AVEPTTN 292
Query: 299 FTASLRSLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTIS 358
+ S + LN H L +T V GS ++ + +
Sbjct: 293 QSTSTQPLNETNL---------HPL----------VSTPVPGSPAAGGVDKA--INMAFN 331
Query: 359 LLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTG 418
++FF G FT P P + +G Q A +G+ + LP N+++++ T
Sbjct: 332 FNGSNFFINGASFTP--PSVPVLLQILSGAQTAQDLLPSGS-VXTLPSNASIEISFPATA 388
Query: 419 MIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTI--GVPSGGWT-AIR 475
HP HLHG + F V R G+ +N +P+ R+ + G P+ G IR
Sbjct: 389 AAPGAPHPFHLHG-HVFAVVRSAGS-------TVYNYSNPIFRDVVSTGTPAAGDNVTIR 440
Query: 476 FRADNPGVWFMHCHLEVHTTWGLKM 500
F +NPG WF+HCH++ H G +
Sbjct: 441 FLTNNPGPWFLHCHIDFHLEGGFAV 465
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 209/505 (41%), Gaps = 67/505 (13%)
Query: 11 KPIVTVNGYFPGPTIVAREDDTVLVKVVNHV-----KYNVSIHWHGVRQLRTCWADGPAY 65
+P V G FPGP I D + N + + SIHWHG Q T WADGPA+
Sbjct: 23 RPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF 82
Query: 66 ITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT-VHGAIVILPKRGVPYPFPKPHK 124
ITQCPI G ++ YNF + G GT W+H+H+ + G V+
Sbjct: 83 ITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDD 142
Query: 125 EVTVI-LSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESG 183
+ T+I L++W+ V+ + + +G A +D+ I+G + + + VE G
Sbjct: 143 DTTIITLADWYH-----VLAKEMGAGGAI-TADSTLIDGLGRTHVNVAAVPLSVITVEVG 196
Query: 184 KTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHA 243
K Y +RL++ + + F I GH +T++E D + + + I Q + +L+A
Sbjct: 197 KRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQP 256
Query: 244 TGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAAN--FTA 301
G Y + A+P ++ D +A + Y P A+ V
Sbjct: 257 VGNYWIRANP--NSGGEGFDGGINSAILRY-------DGATTADPVTVASTVHTKCLIET 307
Query: 302 SLRSLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQ 361
L L+ P P + + LG C V IN V+F PT+ +L
Sbjct: 308 DLHPLSRNGVPGN-PHQGGADCNLNLSLGF-ACGNFV--------INGVSFTPPTVPVL- 356
Query: 362 AHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIA 421
+I +G A +G+ I LP NST+++ L
Sbjct: 357 ---LQI-----------------CSGANTAADLLPSGSVI-SLPSNSTIEIALPAGAAGG 395
Query: 422 PENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPS-GGWTAIRFRADN 480
P HP HLHG + F V N S D DP+ R+ + + G IRF DN
Sbjct: 396 P--HPFHLHGHD-FAVSESASNSTSNYD-------DPIWRDVVSIGGVGDNVTIRFCTDN 445
Query: 481 PGVWFMHCHLEVHTTWGLKMAFIVD 505
PG WF+HCH++ H G + F D
Sbjct: 446 PGPWFLHCHIDWHLDAGFAIVFAED 470
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 219/503 (43%), Gaps = 70/503 (13%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNV-----SIHWHGVRQLRTCWADGPA 64
++ V VNG PGP + D + V++++ + S+HWHG Q T WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT-VHGAIVIL-PKRGVPYPFPKP 122
+I QCPI PG +++Y+F + Q GT W+H+H+ + G V+ P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 123 HKEVTVILSEWWKSDVEAVINEALKSG-LAPNVSDAHTINGHPGPLSSCPSQGGFKLPVE 181
+ + + L++W+ + A K G P +DA ING G S S + V
Sbjct: 141 NDDTVITLADWYHT--------AAKLGPRFPAGADATLINGK-GRAPSDTSAELSVIKVT 191
Query: 182 SGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAA 241
GK RL++ + + F I GH LT++EVD++ +P +++ I Q + +L+A
Sbjct: 192 KGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFVLNAN 251
Query: 242 HATGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAANFTA 301
A Y + A+P + + +A + Y A N T
Sbjct: 252 QAVDNYWIRANPNFGN--VGFNGGINSAILRYDGAP--------------AVEPTTNQTT 295
Query: 302 SLRSLNSKKYPARVPLKIDHS-LFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLL 360
S++ LN V + S + IN A NGS IN +FV P++ +L
Sbjct: 296 SVKPLNEVNLHPLVSTPVPGSPSSGGVDKAIN-MAFNFNGSNFF--INGASFVPPSVPVL 352
Query: 361 QAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMI 420
+I +G Q A +G+ + LP N+++++ T
Sbjct: 353 ----LQI-----------------LSGAQTAQDLLPSGS-VXVLPSNASIEISFPATAAA 390
Query: 421 APENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTI--GVPSGGWT-AIRFR 477
HP HLHG F V R G+ +N +P+ R+ + G P+ G IRF
Sbjct: 391 PGAPHPFHLHGHT-FAVVRSAGS-------TVYNYSNPIFRDVVSTGTPAAGDNVTIRFL 442
Query: 478 ADNPGVWFMHCHLEVHTTWGLKM 500
+NPG WF+HCH++ H G +
Sbjct: 443 TNNPGPWFLHCHIDFHLEGGFAV 465
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 207/505 (40%), Gaps = 68/505 (13%)
Query: 11 KPIVTVNGYFPGPTIVAREDD----TVLVKVVNHVKYNVS-IHWHGVRQLRTCWADGPAY 65
+ V VNG P P I + D V+ ++ NH S IHWHG Q T WADGPA+
Sbjct: 22 REAVVVNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGFFQQGTNWADGPAF 81
Query: 66 ITQCPIQPGQNYIYNFTLAGQRGTLWWHAHI--LWLRATVHGAIVILPKRGVPYPFPKPH 123
+ QCPI G +++Y+F + Q GT W+H+H+ + +V P + +
Sbjct: 82 VNQCPIASGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASLYDIDN 141
Query: 124 KEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESG 183
+ + L++W+ V A + G SD+ ING PS + V G
Sbjct: 142 DDTVITLADWYH--VAAKLGPRFPFG-----SDSTLINGLGRTTGIAPSDLAV-IKVTQG 193
Query: 184 KTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHA 243
K Y RL++ + + F I H +T++E D+ +P + +++ I Q + +L A+
Sbjct: 194 KRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSFVLDASQP 253
Query: 244 TGKYLVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPRNATPVAANFTASL 303
Y + A+P +A + Y P TP L
Sbjct: 254 VDNYWIRANPAFGNTGFA--GGINSAILRYDGAPEIE------PTSVQTTPTKPLNEVDL 305
Query: 304 RSLNSKKYPAR-VPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQA 362
L+ P P +D L NG+ IN+ TFV P++ +L
Sbjct: 306 HPLSPMPVPGSPEPGGVDKPLNLVFNF---------NGTNFF--INDHTFVPPSVPVL-- 352
Query: 363 HFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAP 422
+I +G Q A G+ ++ LP NS++++ T
Sbjct: 353 --LQI-----------------LSGAQAAQDLVPEGS-VFVLPSNSSIEISFPATANAPG 392
Query: 423 ENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTI--GVPSGGWTAIRFRADN 480
HP HLHG + F V R G+ +N +P+ R+ + G P G IRF +N
Sbjct: 393 FPHPFHLHG-HAFAVVRSAGS-------SVYNYDNPIFRDVVSTGQP-GDNVTIRFETNN 443
Query: 481 PGVWFMHCHLEVHTTWGLKMAFIVD 505
PG WF+HCH++ H G + D
Sbjct: 444 PGPWFLHCHIDFHLDAGFAVVMAED 468
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 211/516 (40%), Gaps = 79/516 (15%)
Query: 13 IVTVNGYFPGPTIVAREDDTVLVKVVNHVKYN-VSIHWHGVRQLRTCWADGPAYITQCPI 71
++ VN GPTI A D + V V+N++K N S+HWHG+RQL + DG +T+CPI
Sbjct: 98 VMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPI 157
Query: 72 QP-GQNYIYNFTLAGQRGTLWWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVTVIL 130
P G Y F A Q GT W+H+H A +V + P P L
Sbjct: 158 PPKGGRKTYKFR-ATQYGTSWYHSH---FSAQYGNGVVGTIQIDGPASLPYDIDLGVFPL 213
Query: 131 SEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGG---FKLPVESGKTYM 187
+++ + +++ +G P SD NG + P G + + + GK +
Sbjct: 214 MDYYYRSADELVHFTQSNGAPP--SDNVLFNG----TARHPETGAGQWYNVTLTPGKRHR 267
Query: 188 LRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHATGKY 247
LR+IN + + + GH +TV+ D V F ++ +A GQ +V + A G Y
Sbjct: 268 LRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNY 327
Query: 248 LVAASPFLDTPAILVDNKTATATVHYXXXXXXXXXXXXVPPPR-------NATPVAANFT 300
+ F D +NK A Y +P P N TPV T
Sbjct: 328 WFNVT-FGDGLCGSSNNKFPAAIFRYQGAPATLPTDQGLPVPNHMCLDNLNLTPVV---T 383
Query: 301 ASLRSLNSKKYPARVPLKIDHSLFFTIGLGINPCATC-VNGSRVVADINNVTFVMPTISL 359
S N K P+ ++L T+ +G P VNGS + NV + P +
Sbjct: 384 RSAPVNNFVKRPS-------NTLGVTLDIGGTPLFVWKVNGSAI-----NVDWGKPILDY 431
Query: 360 LQAHFFKIGGVFTDDFPGNP--PVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQD- 416
+ + GN PV+ N + T L+ D
Sbjct: 432 VMS--------------GNTSYPVSDNIVQVDAVD--------------QWTYWLIENDP 463
Query: 417 TGMIAPENHPLHLHGFNFFEVGRGLGN---------FNSKKDPKKFNLVDPVERNTIGVP 467
T I HP+HLHG +F +GR F+ KD + +PV R+ +P
Sbjct: 464 TNPIVSLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLP 523
Query: 468 SGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFI 503
+GGW + F+ DNPG W HCH+ H + GL + F+
Sbjct: 524 AGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDFL 559
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 15/251 (5%)
Query: 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-----YNVSIHWHGVRQLRTCWADGPA 64
++ V VNG PGP I D + V++++ + SIHWHG Q T WADGPA
Sbjct: 21 SRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPA 80
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT-VHGAIVIL-PKRGVPYPFPKP 122
+I QCPI G +++Y+F + Q GT W+H+H+ + G V+ P +
Sbjct: 81 FINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPAADLYDVD 140
Query: 123 HKEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVES 182
+ + + L +W+ V A + A G +DA ING G S + + V
Sbjct: 141 NDDTVITLVDWYH--VAAKLGPAFPLG-----ADATLINGK-GRSPSTTTADLSVISVTP 192
Query: 183 GKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAH 242
GK Y RL++ + + F I GH +T++E D+ P +++ I Q + +L A
Sbjct: 193 GKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYSFVLEANQ 252
Query: 243 ATGKYLVAASP 253
A Y + A+P
Sbjct: 253 AVDNYWIRANP 263
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 22/177 (12%)
Query: 335 ATCVNGSRVVADIN---NVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPA 391
AT V GS V ++ N+ F + +FF G FT P P + +G Q A
Sbjct: 310 ATAVPGSPVAGGVDLAINMAF-----NFNGTNFFINGASFTP--PTVPVLLQIISGAQNA 362
Query: 392 NFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPK 451
+G+ +Y LP N+ +++ T HP HLHG + F V R G+
Sbjct: 363 QDLLPSGS-VYSLPSNADIEISFPATAAAPGAPHPFHLHG-HAFAVVRSAGS-------T 413
Query: 452 KFNLVDPVERNTI--GVPSGGWTA-IRFRADNPGVWFMHCHLEVHTTWGLKMAFIVD 505
+N +P+ R+ + G P+ G IRFR DNPG WF+HCH++ H G + F D
Sbjct: 414 VYNYDNPIFRDVVSTGTPAAGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVFAED 470
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 110/230 (47%), Gaps = 23/230 (10%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQN 76
NG P P I E D V V V N +IHWHG+ Q T +DG + TQ I+PG
Sbjct: 28 NGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDT 87
Query: 77 YIYNFTLAGQRGTLWWHAHI-----LWLRATVHGAIVILPKRGVPYPFPKP-HKEVTVIL 130
+ Y F A GT+W+H H+ + +R + G +++ PK P P K K+ ++L
Sbjct: 88 FTYKFK-AEPAGTMWYHCHVNVNEHVTMRG-MWGPLIVEPKN--PLPIEKTVTKDYILML 143
Query: 131 SEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRL 190
S+W V + N+ + G+ +V D +TIN P + + V+ G LRL
Sbjct: 144 SDW----VSSWANKPGEGGIPGDVFDYYTINAKSFPETQ-------PIRVKKGDVIRLRL 192
Query: 191 INAALNEELFFKIAGHKLTVVEVDAAYV-KPFKTETVLIAPGQTTNVLLS 239
I A + GH + D + KP K +TVLI PG+ +V+L+
Sbjct: 193 IGAG-DHVHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILN 241
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 453 FNLVDPVERNTIGVPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLK 499
F L P++ +T+ + G + DNPG+W +H H++ HTT G K
Sbjct: 217 FPLDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDK 263
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 11/240 (4%)
Query: 11 KPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYN-VSIHWHGVRQLRTCWADGPAYITQC 69
+ ++ +NG GP IVA DTV V V+N++ N SIHWHG+ Q T DG +T+C
Sbjct: 55 EKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTEC 114
Query: 70 PIQP-GQNYIYNFTLAGQRGTLWWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVTV 128
PI P G Y + A Q GT W+H+H A +V + P P
Sbjct: 115 PIPPKGGQRTYRWR-ARQYGTSWYHSH---FSAQYGNGVVGTIQINGPASLPYDIDLGVF 170
Query: 129 ILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGF-KLPVESGKTYM 187
+++++ + +++ AP SD ING ++ +G + + + GK +
Sbjct: 171 PITDYYYRAADDLVH--FTQNNAPPFSDNVLING--TAVNPNTGEGQYANVTLTPGKRHR 226
Query: 188 LRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHATGKY 247
LR++N + + H +TV+ D V +++ +A GQ +V++ A+ A Y
Sbjct: 227 LRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNY 286
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 425 HPLHLHGFNFFEVGRGLGN---------FNSKKDPKKFNLVDPVERNTIGVPSGGWTAIR 475
HP+HLHG +F +GR F+ D + N +P R+T +P+GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 476 FRADNPGVWFMHCHLEVHTTWGLKMAFI 503
FR DNPG W HCH+ H + GL + F+
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 11/240 (4%)
Query: 11 KPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYN-VSIHWHGVRQLRTCWADGPAYITQC 69
+ ++ +NG GP IVA DTV V V+N++ N SIHWHG+ Q T DG +T+C
Sbjct: 55 EKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTEC 114
Query: 70 PIQP-GQNYIYNFTLAGQRGTLWWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVTV 128
PI P G Y + A Q GT W+H+H A +V + P P
Sbjct: 115 PIPPKGGQRTYRWR-ARQYGTSWYHSH---FSAQYGNGVVGTIQINGPASLPYDIDLGVF 170
Query: 129 ILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGF-KLPVESGKTYM 187
+++++ + +++ AP SD ING ++ +G + + + GK +
Sbjct: 171 PITDYYYRAADDLVH--FTQNNAPPFSDNVLING--TAVNPNTGEGQYANVTLTPGKRHR 226
Query: 188 LRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHATGKY 247
LR++N + + H +TV+ D V +++ +A GQ +V++ A+ A Y
Sbjct: 227 LRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNY 286
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 425 HPLHLHGFNFFEVGRGLGN---------FNSKKDPKKFNLVDPVERNTIGVPSGGWTAIR 475
HP+HLHG +F +GR F+ D + N +P R+T +P+GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 476 FRADNPGVWFMHCHLEVHTTWGLKMAFI 503
FR DNPG W HCH+ H + GL + F+
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 11/240 (4%)
Query: 11 KPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYN-VSIHWHGVRQLRTCWADGPAYITQC 69
+ ++ +NG GP IVA DTV V V+N++ N SIHWHG+ Q T DG +T+C
Sbjct: 55 EKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTEC 114
Query: 70 PIQP-GQNYIYNFTLAGQRGTLWWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVTV 128
PI P G Y + A Q GT W+H+H A +V + P P
Sbjct: 115 PIPPKGGQRTYRWR-ARQYGTSWYHSH---FSAQYGNGVVGTIQINGPASLPYDIDLGVF 170
Query: 129 ILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGF-KLPVESGKTYM 187
+++++ + +++ AP SD ING ++ +G + + + GK +
Sbjct: 171 PITDYYYRAADDLVH--FTQNNAPPFSDNVLING--TAVNPNTGEGQYANVTLTPGKRHR 226
Query: 188 LRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHATGKY 247
LR++N + + H +TV+ D V +++ +A GQ +V++ A+ A Y
Sbjct: 227 LRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNY 286
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 425 HPLHLHGFNFFEVGRGLGN---------FNSKKDPKKFNLVDPVERNTIGVPSGGWTAIR 475
HP+HLHG +F +GR F+ D + N +P R+T +P+GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 476 FRADNPGVWFMHCHLEVHTTWGLKMAFI 503
FR DNPG W HCH+ H + GL + F+
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFL 518
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 13 IVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
++T G FPGPT+ R DTV + + N + ++HWHG+ + D P I
Sbjct: 37 LLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPI--SPKVDDPF----LEIP 90
Query: 73 PGQNYIYNFTLAGQ-RGTLWWHAHIL-----WLRATVHGAIVILPKRGVPYPFPKPHKEV 126
PG+++ Y FT+ + GT W+H H+ L A + GA+V+ P + +E
Sbjct: 91 PGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDA-IPELREAEEH 149
Query: 127 TVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGK-T 185
++L + AL+ G + +NG G L G + + + K T
Sbjct: 150 LLVLKDL-----------ALQGGRPAPHTPMDWMNGKEGDLVLV--NGALRPTLVAQKAT 196
Query: 186 YMLRLINAALNEELFFKIAGHKLTVVEVDAAYV-KPFKTETVLIAPGQTTNVLLSAAHAT 244
LRL+NA+ + H L ++ D ++ +P + +L+APG+ VL+
Sbjct: 197 LRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVR-LRKE 255
Query: 245 GKYLVAASPF 254
G++L+ A P+
Sbjct: 256 GRFLLQALPY 265
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 95/237 (40%), Gaps = 36/237 (15%)
Query: 15 TVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGV----RQLRTCWADGPAYITQCP 70
T NG P P I E D + + V N +K +IHWHGV Q DG + P
Sbjct: 74 TYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQ------DGSPH---DP 124
Query: 71 IQPGQNYIYNFTL-AGQRGTLWWHAHILWLRAT-----VHGAIVILPKRGVPYPFPKPHK 124
I G+ IY F + GT W+H H + + + GA VI K+ K
Sbjct: 125 ILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL----K 180
Query: 125 EVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGK 184
E +++S+ + D A I PN + +NG G G FK ++
Sbjct: 181 EKDLMISD-LRLDENAQI---------PNNNLNDWLNGREGEFVLI--NGQFKPKIKLAT 228
Query: 185 TYMLRLINAALNEELFFKIAGHKLTVVEVDAAYV-KPFKTETVLIAPGQTTNVLLSA 240
+R+ NA L +I G K +V D + K E + ++P VL+ A
Sbjct: 229 NERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDA 285
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 424 NHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADNPGV 483
+HP H+HG F + L N K +F + R+TI V +R + D G+
Sbjct: 406 DHPFHIHGTQFELISSKL---NGKVQKAEFRAL----RDTINVRPNEELRLRMKQDFKGL 458
Query: 484 WFMHCHLEVHTTWGL 498
HCH+ H G+
Sbjct: 459 RMYHCHILEHEDLGM 473
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 112/267 (41%), Gaps = 35/267 (13%)
Query: 1 MKNATRLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWA 60
+K AT + +T G PTI+ R V + + N + +HWHG W
Sbjct: 17 IKEATYIEATASGYMAEGVL-NPTIILRRGQRVDMTLKNKLTEPTIVHWHG---FDVNWH 72
Query: 61 DG--PAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRATV----HGAIVILPKRG 114
+ P++ I PG++Y Y+F + + GT +H H L A +VI+ G
Sbjct: 73 NDAHPSF----AITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSG 128
Query: 115 VPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQG 174
F ++ +++S+ V N +A + +A +NG +
Sbjct: 129 SDLGFKYGVNDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVKDAV------- 181
Query: 175 GFKLPVESGKTYMLRLINAALNEELFFKIAGHK------LTVVEVDAAYV-KPFKTETVL 227
FKL SG +Y LRL+N + N L+ K + ++ VD ++ +P + +
Sbjct: 182 -FKL---SGGSYRLRLVNGS-NARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALF 236
Query: 228 IAPGQTTNVLLSAAHATGKYLVAASPF 254
+AP + V++ G YL+ +PF
Sbjct: 237 LAPAERAEVVVELGE--GVYLLKNTPF 261
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 13/127 (10%)
Query: 15 TVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPG 74
+ NG PGPT+ ARE D + + N + +IH+HGV + DG I I PG
Sbjct: 58 SYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIGAGSIAPG 114
Query: 75 QNYIYNFTLAGQRGTLWWHAHILWLRATV----HGAIVILPKRGVPYPFPKPHKEVTVIL 130
Q++ Y F A GT +H H L + +G ++ PK G P P + V++
Sbjct: 115 QSFTYEFD-ATPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP-----PADDEMVMV 168
Query: 131 SEWWKSD 137
+ +D
Sbjct: 169 MNGYNTD 175
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 425 HPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADNPGVW 484
H HLHG + + G+ S+ DP L+D + N GV S G+ I PG+W
Sbjct: 212 HTFHLHGHRWLDNRTGM--RTSEYDPSP--LIDIKDLNP-GV-SFGFQVIAGEGVGPGMW 265
Query: 485 FMHCHLEVHTTWGLKMAFIVDNGKG 509
HCH++ H+ G+ F+V N G
Sbjct: 266 MYHCHVQNHSDMGMAGMFLVRNADG 290
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 14/81 (17%)
Query: 21 PGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYN 80
PGP + E DT+ + +VN +S+H HGV +DG + + PGQ Y
Sbjct: 56 PGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDY--DVNSDG-TLMNGSAVMPGQTRRYT 112
Query: 81 FTLAGQRGTLWWHAHILWLRA 101
W +H+ + RA
Sbjct: 113 -----------WRSHVGYRRA 122
>pdb|2BO0|A Chain A, Crystal Structure Of The C130a Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHA----HILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +HA + W + + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHAAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQ 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|2XX0|A Chain A, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
pdb|2XX0|B Chain B, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNV--SIHWHGVRQLRTCWADGPAYI 66
+T +T NG PGPT+V E D V + +VN + S+ +HG A G A +
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHGA-----TGALGGAKL 105
Query: 67 TQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPFPK 121
T + PG+ F A + GT +H + W + + + G +++LP+ G+ P K
Sbjct: 106 TN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGK 162
Query: 122 P-HKEVTVILSEW 133
P H + + E+
Sbjct: 163 PLHYDRAYTIGEF 175
>pdb|2XXG|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
pdb|2XXG|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNV--SIHWHGVRQLRTCWADGPAYI 66
+T +T NG PGPT+V E D V + +VN + S+ +HG A G A +
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHGA-----TGALGGAKL 105
Query: 67 TQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPFPK 121
T + PG+ F A + GT +H + W + + + G +++LP+ G+ P K
Sbjct: 106 TN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGK 162
Query: 122 P-HKEVTVILSEW 133
P H + + E+
Sbjct: 163 PLHYDRAYTIGEF 175
>pdb|2XX1|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|B Chain B, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|D Chain D, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|E Chain E, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|F Chain F, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNV--SIHWHGVRQLRTCWADGPAYI 66
+T +T NG PGPT+V E D V + +VN + S+ +HG A G A +
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHGA-----TGALGGAKL 105
Query: 67 TQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPFPK 121
T + PG+ F A + GT +H + W + + + G +++LP+ G+ P K
Sbjct: 106 TN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGK 162
Query: 122 P-HKEVTVILSEW 133
P H + + E+
Sbjct: 163 PLHYDRAYTIGEF 175
>pdb|2XXF|A Chain A, Cu Metallated H254f Mutant Of Nitrite Reductase
pdb|2XXF|B Chain B, Cu Metallated H254f Mutant Of Nitrite Reductase
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQ 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|2BP0|A Chain A, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPE 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|2BP0|B Chain B, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPE 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|1GS7|A Chain A, Crystal Structure Of H254f Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQ 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|1OE2|A Chain A, Atomic Resolution Structure Of D92e Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVEFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQ 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|1OE1|A Chain A, Atomic Resolution Structure Of The Wildtype Native Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1OE3|A Chain A, Atomic Resolution Structure Of 'half Apo' Nir
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQ 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|2JFC|A Chain A, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|B Chain B, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|C Chain C, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|D Chain D, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|E Chain E, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|F Chain F, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
Length = 335
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 50 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 102
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + + G +++LP+ G+ P
Sbjct: 103 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPQ 159
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 160 GKPLHYDRAYTIGEF 174
>pdb|1GS8|A Chain A, Crystal Structure Of Mutant D92n Alcaligenes Xylosoxidans
Nitrite Reductase
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV+ H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVNFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQ 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|2XWZ|A Chain A, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|B Chain B, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|C Chain C, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|D Chain D, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|E Chain E, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|F Chain F, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQ 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|2VN3|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 337
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 52 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 104
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + + G +++LP+ G+ P
Sbjct: 105 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQ 161
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 162 GKPLHYDRAYTIGEF 176
>pdb|1WA1|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
pdb|1WA2|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase With Nitrite Bound
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQ 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|1HAU|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At High
Ph And In Copper Free Form At 1.9 A Resolution
pdb|1HAW|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At High
Ph And In Copper Free Form At 1.9a Resolution
pdb|2VM3|A Chain A, Structure Of Alcaligenes Xylosoxidans In Space Group R3 -
1 Of 2
pdb|2VM4|A Chain A, Structure Of Alcaligenes Xylosoxidans Nitrite Reductase In
Space Group R3 - 2 Of 2
pdb|2VW4|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 2 Of 3
pdb|2VW4|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 2 Of 3
pdb|2VW6|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 3 Of 3
pdb|2VW6|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 3 Of 3
pdb|2VW7|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 1 Of 3
pdb|2VW7|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 1 Of 3
pdb|2ZON|A Chain A, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
pdb|2ZON|B Chain B, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
pdb|2ZON|C Chain C, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
Length = 336
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQ 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|1BQ5|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans Gifu 1051
Length = 342
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 57 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 109
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + + G +++LP+ G+ P
Sbjct: 110 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQ 166
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 167 GKPLHYDRAYTIGEF 181
>pdb|1GS6|X Chain X, Crystal Structure Of M144a Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGASGTLMVLPRDGLKDPQ 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|1WA0|X Chain X, Crystal Structure Of W138h Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 26/138 (18%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-------ATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHA--------HILWLRATVHGAIVILPKRGVP 116
+T + PG+ F A + GT +H H++ + + G +++LP+ G+
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPHHVV---SGMSGTLMVLPRDGLK 157
Query: 117 YPFPKP-HKEVTVILSEW 133
P KP H + + E+
Sbjct: 158 DPQGKPLHYDRAYTIGEF 175
>pdb|2BP8|A Chain A, M168q Structure Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGQSGTLMVLPRDGLKDPE 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|2BP8|B Chain B, M168q Structure Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGQSGTLMVLPRDGLKDPE 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|2VMJ|A Chain A, Type 1 Copper-Binding Loop Of Nitrite Reductase Mutant:
130- Capegmvpwhvvsgm-144 To 130-Ctphpfm-136
Length = 329
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 18/130 (13%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 52 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG-------ATGALGGA 104
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRATVHGAIVILPKRGVPYPFPKP-H 123
+T + PG+ F A + GT +H + G +++LP+ G+ P KP H
Sbjct: 105 KLTN--VNPGEQATLRFK-ADRSGTFVYHC---TPHPFMSGTLMVLPRDGLKDPQGKPLH 158
Query: 124 KEVTVILSEW 133
+ + E+
Sbjct: 159 YDRAYTIGEF 168
>pdb|1NDT|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 336
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT +H + W + + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYHCAPSGMVPWHVVSGMSGTLMVLPRDGLKDPA 160
Query: 120 PKP-HKEVTVILSEW 133
P H + + E+
Sbjct: 161 GAPLHYDRAYTIGEF 175
>pdb|1WAE|A Chain A, Crystal Structure Of H129v Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D V + +V N + +NV H A G A
Sbjct: 51 TTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFH-------GATGALGGA 103
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWW----HAHILW-LRATVHGAIVILPKRGVPYPF 119
+T + PG+ F A + GT + + W + + + G +++LP+ G+ P
Sbjct: 104 KLTN--VNPGEQATLRFK-ADRSGTFVYVCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQ 160
Query: 120 PKP-HKEVTVILSEW 133
KP H + + E+
Sbjct: 161 GKPLHYDRAYTIGEF 175
>pdb|1NDR|A Chain A, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDR|B Chain B, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDR|C Chain C, Crystallographic Structure Of A Blue Copper Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|A Chain A, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|B Chain B, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
pdb|1NDS|C Chain C, Crystallographic Structure Of A Substrate Bound Blue
Copper Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 330
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 19/116 (16%)
Query: 9 STKPIVTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPA 64
+T +T NG PGPT+V E D + + +V N + +NV H
Sbjct: 47 TTAQAMTFNGSVPGPTLVVHEGDYIELTLVNPATNSMPHNVDFHAATGALGGA------- 99
Query: 65 YITQCPIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
+ PGQ + F A + GT +H + W + + ++GA+++LP+ G+
Sbjct: 100 --GLTQVVPGQEAVLRFK-ADRSGTFVYHCAPAGMVPWHVVSGMNGALMVLPRDGL 152
>pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|B Chain B, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|C Chain C, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|D Chain D, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|E Chain E, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|F Chain F, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBV|A Chain A, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|B Chain B, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|C Chain C, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|D Chain D, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|E Chain E, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|F Chain F, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
Length = 327
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 90/238 (37%), Gaps = 41/238 (17%)
Query: 15 TVNGYFPGPTIVAREDDTVLVKVVNH----VKYNVSIHWHGVRQLRTCWADGPAYITQCP 70
T +G PG I RE DTV V+ N+ V +NV H +
Sbjct: 62 TFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGGA---------AATF 112
Query: 71 IQPGQNYIYNFTLAGQRGTLWWHAHI----LWLRATVHGAIVILPKRGVPYPFPKPHKEV 126
PG+ ++F A Q G +H + + + ++G I++ PK G+ PK KE
Sbjct: 113 TAPGRTSTFSFK-ALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGL----PKVDKEF 167
Query: 127 TVILSEWWKSDVEAVINEALKSGLAPNVSDAH--------TINGHPGPLSSCPSQGGFKL 178
++ +++ + GL P D NGH G L+ G L
Sbjct: 168 YIVQGDFYTKGKKGA------QGLQPFDMDKAVAEQPEYVVFNGHVGALT-----GDNAL 216
Query: 179 PVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNV 236
++G+T + + N N F + G V V+ + ++ ++ G + V
Sbjct: 217 KAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIV 274
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|3ABG|B Chain B, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|2XLL|A Chain A, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|B Chain B, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|C Chain C, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|D Chain D, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
Length = 534
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Query: 425 HPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPV---ERNTIGVPSGGWTAIRFRADNP 481
HP+H+H +F + R GN P + L D V R T+ V + A P
Sbjct: 398 HPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEA-------HYAPFP 450
Query: 482 GVWFMHCHLEVHTTWGLKMAF 502
GV+ HCH +H + AF
Sbjct: 451 GVYMFHCHNLIHEDHDMMAAF 471
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 96/249 (38%), Gaps = 33/249 (13%)
Query: 13 IVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHG--VRQLRTCWADGPAYITQCP 70
+V +G PGPT +V+ +N+ + S+H HG R WA+ IT
Sbjct: 59 LVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAAFDGWAED---IT--- 112
Query: 71 IQPGQNYIYNFTLAGQRGTLWWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVTVIL 130
+PG Y + TLW+H H + + A + G+ Y P ++ +
Sbjct: 113 -EPGSFKDYYYPNRQSARTLWYHDHAMHITAEN----AYRGQAGL-YMLTDPAEDALNLP 166
Query: 131 SEWWKSDVEAVINEALKSGLAPNVS----------DAHTINGHPGPLSSC-PSQGGFK-L 178
S + + D+ ++ + V+ D +NG P P + P + F+ L
Sbjct: 167 SGYGEFDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQPWPFKNVEPRKYRFRFL 226
Query: 179 PVESGKTYMLRLINA-ALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVL 237
+++ L + A++ L FK+ ++E P T + I+ + V+
Sbjct: 227 DAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLE------HPADTSLLYISMAERYEVV 280
Query: 238 LSAAHATGK 246
+ GK
Sbjct: 281 FDFSDYAGK 289
>pdb|2UXT|A Chain A, Sufi Protein From Escherichia Coli
pdb|2UXT|B Chain B, Sufi Protein From Escherichia Coli
pdb|2UXV|A Chain A, Sufi Protein From Escherichia Coli
pdb|2UXV|B Chain B, Sufi Protein From Escherichia Coli
Length = 451
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 29/238 (12%)
Query: 16 VNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQ 75
+NG + GPTI + D V + N + NVS+ G+ Q+ GPA + + P
Sbjct: 43 INGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGL-QVPGPLMGGPARM----MSPNA 97
Query: 76 NYIYNFTLAGQRGTLWWHAHILWLRAT-----VHGAIVILPKRGVPYPFPKPH--KEVTV 128
++ + TLW+HA+ A + G ++ + P P + + V
Sbjct: 98 DWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPV 157
Query: 129 ILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYM- 187
I+ + K E + G V D +NG P VE + ++
Sbjct: 158 IIQD--KRLDNFGTPEYNEPGSGGFVGDTLLVNGVQSPY------------VEVSRGWVR 203
Query: 188 LRLINAALNEELFFKI-AGHKLTVVEVDAAYV-KPFKTETVLIAPGQTTNVLLSAAHA 243
LRL+NA+ + ++ G L V+ D ++ P + + +APG+ +L+ ++
Sbjct: 204 LRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSNG 261
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 17/80 (21%)
Query: 425 HPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADNPGVW 484
H +H HG +F RG+ + + G + + PG+W
Sbjct: 975 HTVHFHGHSFQYKHRGV-----------------YSSDVFDIFPGTYQTLEMFPRTPGIW 1017
Query: 485 FMHCHLEVHTTWGLKMAFIV 504
+HCH+ H G++ + V
Sbjct: 1018 LLHCHVTDHIHAGMETTYTV 1037
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 17/80 (21%)
Query: 425 HPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADNPGVW 484
H +H HG +F RG+ + + G + + PG+W
Sbjct: 994 HTVHFHGHSFQYKHRGV-----------------YSSDVFDIFPGTYQTLEMFPRTPGIW 1036
Query: 485 FMHCHLEVHTTWGLKMAFIV 504
+HCH+ H G++ + V
Sbjct: 1037 LLHCHVTDHIHAGMETTYTV 1056
>pdb|4AKO|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: E498l Mutant
Length = 507
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 49/264 (18%), Positives = 103/264 (39%), Gaps = 29/264 (10%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHV------------------KYNVSIHWHGVRQLRTC 58
NG FPGPTI + ++ V VK +N++ + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSEEPEVKTVVHLHGGVTPDDS 111
Query: 59 WADGPAYITQCPIQPG---QNYIYNFTLAGQRGTLWWHAHILWL-RATVH----GAIVIL 110
A+ ++ Q G + +Y++ + LW+H H + L R V+ GA +I
Sbjct: 112 DGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIH 171
Query: 111 PKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSC 170
+ P +V +++++ ++ ++ + +P++ + + G
Sbjct: 172 DPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILV 231
Query: 171 PSQGGFKLPVESGKTYMLRLINAALNE--ELFFKIAGHKLTVVEVDAAYVKPFKTETVLI 228
+ L VE K Y R+INA+ L G + + + K + +
Sbjct: 232 NGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSL 290
Query: 229 APGQTTNVLLSAAHATGKYLVAAS 252
AP + ++++ G+ ++ A+
Sbjct: 291 APAERYDIIIDFTAYEGESIILAN 314
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQN 76
NG GP + + V V + N + ++HWHG+ ++ GP I I PG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI----IPPGGK 96
Query: 77 YIYNFTLAGQRGTLWWHAH 95
+ T W+H H
Sbjct: 97 RSVTLNVDQPAATCWFHPH 115
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 425 HPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVP--SGGWTAIRFRADNPG 482
H HLHG + + G+ DP + ++D N I P S G+ I G
Sbjct: 196 HTFHLHGHRWADNRTGM--LTGPDDPSQ--VID----NKICGPADSFGFQVIAGEGVGAG 247
Query: 483 VWFMHCHLEVHTTWGLKMAFIV 504
W HCH++ H+ G+ F+V
Sbjct: 248 AWMYHCHVQSHSDMGMVGLFLV 269
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 20 FPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPG--QNY 77
PGP I E DT+ ++ N + VS+H HG+ +DG ++ ++PG + Y
Sbjct: 39 IPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDY--EISSDGTKQ-SRSDVEPGGTRTY 95
Query: 78 IYNFTLAGQRGTLWWHA 94
+ + G+R W A
Sbjct: 96 TWRTHVPGRRADGTWRA 112
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQN 76
NG GP + + V V + N + ++HWHG+ ++ GP I I PG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI----IPPGGK 96
Query: 77 YIYNFTLAGQRGTLWWHAH 95
+ T W+H H
Sbjct: 97 RSVTLNVDQPAATCWFHPH 115
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQN 76
NG GP + + V V + N + ++HWHG+ ++ GP Q I PG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGP----QGIIPPGGK 96
Query: 77 YIYNFTLAGQRGTLWWHAH 95
+ T W+H H
Sbjct: 97 RSVTLNVDQPAATCWFHPH 115
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQN 76
NG GP + + V V + N + ++HWHG+ ++ GP I I PG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI----IPPGGK 96
Query: 77 YIYNFTLAGQRGTLWWHAH 95
+ T W+H H
Sbjct: 97 RSVTLNVDQPAATCWFHPH 115
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQN 76
NG GP + + V V + N + ++HWHG+ ++ GP I I PG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI----IPPGGK 96
Query: 77 YIYNFTLAGQRGTLWWHAH 95
+ T W+H H
Sbjct: 97 RSVTLNVDQPAATCWFHPH 115
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQN 76
NG GP + + V V + N + ++HWHG+ ++ GP Q I PG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGP----QGIIPPGGK 96
Query: 77 YIYNFTLAGQRGTLWWHAH 95
+ T W+H H
Sbjct: 97 RSVTLNVDQPAATCWFHPH 115
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQN 76
NG GP + + V V + N + ++HWHG+ ++ GP I I PG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI----IPPGGK 96
Query: 77 YIYNFTLAGQRGTLWWHAH 95
+ T W+H H
Sbjct: 97 RSVTLNVDQPAATCWFHPH 115
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQN 76
NG GP + + V V + N + ++HWHG+ ++ GP I I PG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL-EVPGEVDGGPQGI----IPPGGK 96
Query: 77 YIYNFTLAGQRGTLWWHAH 95
+ T W+H H
Sbjct: 97 RSVTLNVDQPAATCWFHPH 115
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 425 HPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVP--SGGWTAIRFRADNPG 482
H H+HG + + G+ DP + ++D N I P S G+ I G
Sbjct: 231 HTFHMHGHRWADNRTGI--LTGPDDPSR--VID----NKITGPADSFGFQIIAGEGVGAG 282
Query: 483 VWFMHCHLEVHTTWGLKMAFIV 504
W HCH++ H+ G+ F+V
Sbjct: 283 AWMYHCHVQSHSDMGMVGLFLV 304
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 21 PGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPG--QNYI 78
PGP I E DT+ ++ N + S+H HG+ +DG A + + ++PG + Y
Sbjct: 75 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDY--EISSDGTA-MNKSDVEPGGTRTYT 131
Query: 79 YNFTLAGQRGTLWW 92
+ G+R W
Sbjct: 132 WRTHKPGRRDDGTW 145
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Query: 14 VTVNGYFP--GPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPI 71
+T+N P GP A D V + ++ H +Y + H HG R WAD I P
Sbjct: 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTGPD 252
Query: 72 QP 73
P
Sbjct: 253 DP 254
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 425 HPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVP--SGGWTAIRFRADNPG 482
H H+HG + + G+ DP + ++D N I P S G+ I G
Sbjct: 193 HTFHMHGHRWADNRTGI--LTGPDDPSR--VID----NKITGPADSFGFQIIAGEGVGAG 244
Query: 483 VWFMHCHLEVHTTWGLKMAFIV 504
W HCH++ H+ G+ F+V
Sbjct: 245 AWMYHCHVQSHSDMGMVGLFLV 266
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 21 PGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPG--QNYI 78
PGP I E DT+ ++ N + S+H HG+ +DG A + + ++PG + Y
Sbjct: 37 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDA--EISSDGTA-MNKSDVEPGGTRTYT 93
Query: 79 YNFTLAGQRGTLWW 92
+ G+R W
Sbjct: 94 WRTHKPGRRDDGTW 107
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 425 HPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVP--SGGWTAIRFRADNPG 482
H H+HG + + G+ DP + V N I P S G+ I G
Sbjct: 194 HTFHMHGHRWADNRTGI--LTGPDDPSR------VIDNKITGPADSFGFQIIAGEGVGAG 245
Query: 483 VWFMHCHLEVHTTWGLKMAFIV 504
W HCH++ H+ G+ F+V
Sbjct: 246 AWMYHCHVQSHSDMGMVGLFLV 267
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 21 PGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPG--QNYI 78
PGP I E DT+ ++ N + S+H HG+ +DG A + + ++PG + Y
Sbjct: 38 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLD--FEISSDGTA-MNKSDVEPGGTRTYT 94
Query: 79 YNFTLAGQRGTLWW 92
+ G+R W
Sbjct: 95 WRTHKPGRRDDGTW 108
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 14 VTVNGYFP--GPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPI 71
+T+N P GP A D V + ++ H +Y + H HG R WAD I P
Sbjct: 161 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTGPD 215
Query: 72 QPGQ 75
P +
Sbjct: 216 DPSR 219
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 425 HPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVP--SGGWTAIRFRADNPG 482
H H+HG + + G+ DP + V N I P S G+ I G
Sbjct: 190 HTFHMHGHRWADNRTGI--LTGPDDPSR------VIDNKITGPADSFGFQIIAGEGVGAG 241
Query: 483 VWFMHCHLEVHTTWGLKMAFIV 504
W HCH++ H+ G+ F+V
Sbjct: 242 AWMYHCHVQSHSDMGMVGLFLV 263
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 21 PGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPG--QNYI 78
PGP I E DT+ ++ N + S+H HG+ +DG A + + ++PG + Y
Sbjct: 34 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDY--EISSDGTA-MNKSDVEPGGTRTYT 90
Query: 79 YNFTLAGQRGTLWW 92
+ G+R W
Sbjct: 91 WRTHKPGRRDDGTW 104
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 22 GPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWA----DGPAYITQCPIQPGQNY 77
GP + DT+L+ N +I+ HG+ +R ++ G ++ PI PG+ +
Sbjct: 451 GPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKHLKDFPILPGEIF 510
Query: 78 IYNFTLAGQRG 88
Y +T+ + G
Sbjct: 511 KYKWTVTVEDG 521
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 22 GPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWA----DGPAYITQCPIQPGQNY 77
GP + DT+L+ N +I+ HG+ +R ++ G ++ PI PG+ +
Sbjct: 450 GPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKHLKDFPILPGEIF 509
Query: 78 IYNFTLAGQRG 88
Y +T+ + G
Sbjct: 510 KYKWTVTVEDG 520
>pdb|4A67|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116e Mutant
Length = 513
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 33/268 (12%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHV----------------------KYNVSIHWHGVRQ 54
NG FPGPTI + ++ V VK +N++ + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT 111
Query: 55 LRTCWADGPAYITQCPIQPG---QNYIYNFTLAGQRGTLWWHAHILWL-RATVH----GA 106
A+ ++ Q G + +Y++ + LW+H H + L R V+ GA
Sbjct: 112 PDDSEGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGA 171
Query: 107 IVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGP 166
+I + P +V +++++ ++ ++ + +P++ + + G
Sbjct: 172 YIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE 231
Query: 167 LSSCPSQGGFKLPVESGKTYMLRLINAALNE--ELFFKIAGHKLTVVEVDAAYVKPFKTE 224
+ L VE K Y R+INA+ L G + + + K
Sbjct: 232 TILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLN 290
Query: 225 TVLIAPGQTTNVLLSAAHATGKYLVAAS 252
+ +AP + ++++ G+ ++ A+
Sbjct: 291 SFSLAPAERYDIIIDFTAYEGESIILAN 318
>pdb|4A66|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116a Mutant
Length = 513
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 33/268 (12%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHV----------------------KYNVSIHWHGVRQ 54
NG FPGPTI + ++ V VK +N++ + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT 111
Query: 55 LRTCWADGPAYITQCPIQPG---QNYIYNFTLAGQRGTLWWHAHILWL-RATVH----GA 106
A+ ++ Q G + +Y++ + LW+H H + L R V+ GA
Sbjct: 112 PDDSAGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGA 171
Query: 107 IVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGP 166
+I + P +V +++++ ++ ++ + +P++ + + G
Sbjct: 172 YIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE 231
Query: 167 LSSCPSQGGFKLPVESGKTYMLRLINAALNE--ELFFKIAGHKLTVVEVDAAYVKPFKTE 224
+ L VE K Y R+INA+ L G + + + K
Sbjct: 232 TILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLN 290
Query: 225 TVLIAPGQTTNVLLSAAHATGKYLVAAS 252
+ +AP + ++++ G+ ++ A+
Sbjct: 291 SFSLAPAERYDIIIDFTAYEGESIILAN 318
>pdb|4AKQ|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: E498d Mutant
Length = 513
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 33/268 (12%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHV----------------------KYNVSIHWHGVRQ 54
NG FPGPTI + ++ V VK +N++ + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT 111
Query: 55 LRTCWADGPAYITQCPIQPG---QNYIYNFTLAGQRGTLWWHAHILWL-RATVH----GA 106
A+ ++ Q G + +Y++ + LW+H H + L R V+ GA
Sbjct: 112 PDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGA 171
Query: 107 IVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGP 166
+I + P +V +++++ ++ ++ + +P++ + + G
Sbjct: 172 YIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE 231
Query: 167 LSSCPSQGGFKLPVESGKTYMLRLINAALNE--ELFFKIAGHKLTVVEVDAAYVKPFKTE 224
+ L VE K Y R+INA+ L G + + + K
Sbjct: 232 TILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLN 290
Query: 225 TVLIAPGQTTNVLLSAAHATGKYLVAAS 252
+ +AP + ++++ G+ ++ A+
Sbjct: 291 SFSLAPAERYDIIIDFTAYEGESIILAN 318
>pdb|1GSK|A Chain A, Crystal Structure Of Cota, An Endospore Coat Protein From
Bacillus Subtilis
pdb|1OF0|A Chain A, Crystal Structure Of Bacillus Subtilis Cota After 1h
Soaking With Ebs
pdb|1W6L|A Chain A, 3d Structure Of Cota Incubated With Cucl2
pdb|1W6W|A Chain A, 3d Structure Of Cota Incubated With Sodium Azide
pdb|1W8E|A Chain A, 3d Structure Of Cota Incubated With Hydrogen Peroxide
pdb|2BHF|A Chain A, 3d Structure Of The Reduced Form Of Cota
pdb|2X88|A Chain A, Crystal Structure Of Holocota
pdb|3ZDW|A Chain A, Substrate And Dioxygen Binding To The Endospore Coat
Laccase Cota From Bacillus Subtilis
Length = 513
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 33/268 (12%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHV----------------------KYNVSIHWHGVRQ 54
NG FPGPTI + ++ V VK +N++ + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT 111
Query: 55 LRTCWADGPAYITQCPIQPG---QNYIYNFTLAGQRGTLWWHAHILWL-RATVH----GA 106
A+ ++ Q G + +Y++ + LW+H H + L R V+ GA
Sbjct: 112 PDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGA 171
Query: 107 IVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGP 166
+I + P +V +++++ ++ ++ + +P++ + + G
Sbjct: 172 YIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE 231
Query: 167 LSSCPSQGGFKLPVESGKTYMLRLINAALNE--ELFFKIAGHKLTVVEVDAAYVKPFKTE 224
+ L VE K Y R+INA+ L G + + + K
Sbjct: 232 TILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLN 290
Query: 225 TVLIAPGQTTNVLLSAAHATGKYLVAAS 252
+ +AP + ++++ G+ ++ A+
Sbjct: 291 SFSLAPAERYDIIIDFTAYEGESIILAN 318
>pdb|4A68|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: D116n Mutant
Length = 513
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 33/268 (12%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHV----------------------KYNVSIHWHGVRQ 54
NG FPGPTI + ++ V VK +N++ + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT 111
Query: 55 LRTCWADGPAYITQCPIQPG---QNYIYNFTLAGQRGTLWWHAHILWL-RATVH----GA 106
A+ ++ Q G + +Y++ + LW+H H + L R V+ GA
Sbjct: 112 PDDSNGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGA 171
Query: 107 IVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGP 166
+I + P +V +++++ ++ ++ + +P++ + + G
Sbjct: 172 YIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE 231
Query: 167 LSSCPSQGGFKLPVESGKTYMLRLINAALNE--ELFFKIAGHKLTVVEVDAAYVKPFKTE 224
+ L VE K Y R+INA+ L G + + + K
Sbjct: 232 TILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLN 290
Query: 225 TVLIAPGQTTNVLLSAAHATGKYLVAAS 252
+ +AP + ++++ G+ ++ A+
Sbjct: 291 SFSLAPAERYDIIIDFTAYEGESIILAN 318
>pdb|4AKP|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site:e498t Mutant
Length = 513
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 33/268 (12%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHV----------------------KYNVSIHWHGVRQ 54
NG FPGPTI + ++ V VK +N++ + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT 111
Query: 55 LRTCWADGPAYITQCPIQPG---QNYIYNFTLAGQRGTLWWHAHILWL-RATVH----GA 106
A+ ++ Q G + +Y++ + LW+H H + L R V+ GA
Sbjct: 112 PDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGA 171
Query: 107 IVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGP 166
+I + P +V +++++ ++ ++ + +P++ + + G
Sbjct: 172 YIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE 231
Query: 167 LSSCPSQGGFKLPVESGKTYMLRLINAALNE--ELFFKIAGHKLTVVEVDAAYVKPFKTE 224
+ L VE K Y R+INA+ L G + + + K
Sbjct: 232 TILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLN 290
Query: 225 TVLIAPGQTTNVLLSAAHATGKYLVAAS 252
+ +AP + ++++ G+ ++ A+
Sbjct: 291 SFSLAPAERYDIIIDFTAYEGESIILAN 318
>pdb|2X87|A Chain A, Crystal Structure Of The Reconstituted Cota
Length = 513
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 33/268 (12%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHV----------------------KYNVSIHWHGVRQ 54
NG FPGPTI + ++ V VK +N++ + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT 111
Query: 55 LRTCWADGPAYITQCPIQPG---QNYIYNFTLAGQRGTLWWHAHILWL-RATVH----GA 106
A+ ++ Q G + +Y++ + LW+H H + L R V+ GA
Sbjct: 112 PDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGA 171
Query: 107 IVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGP 166
+I + P +V +++++ ++ ++ + +P++ + + G
Sbjct: 172 YIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE 231
Query: 167 LSSCPSQGGFKLPVESGKTYMLRLINAALNE--ELFFKIAGHKLTVVEVDAAYVKPFKTE 224
+ L VE K Y R+INA+ L G + + + K
Sbjct: 232 TILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLN 290
Query: 225 TVLIAPGQTTNVLLSAAHATGKYLVAAS 252
+ +AP + ++++ G+ ++ A+
Sbjct: 291 SFSLAPAERYDIIIDFTAYEGESIILAN 318
>pdb|2WSD|A Chain A, Proximal Mutations At The Type 1 Cu Site Of Cota-Laccase:
I494a Mutant
Length = 513
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 33/268 (12%)
Query: 17 NGYFPGPTIVAREDDTVLVKVVNHV----------------------KYNVSIHWHGVRQ 54
NG FPGPTI + ++ V VK +N++ + +H HG
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT 111
Query: 55 LRTCWADGPAYITQCPIQPG---QNYIYNFTLAGQRGTLWWHAHILWL-RATVH----GA 106
A+ ++ Q G + +Y++ + LW+H H + L R V+ GA
Sbjct: 112 PDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGA 171
Query: 107 IVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGP 166
+I + P +V +++++ ++ ++ + +P++ + + G
Sbjct: 172 YIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE 231
Query: 167 LSSCPSQGGFKLPVESGKTYMLRLINAALNE--ELFFKIAGHKLTVVEVDAAYVKPFKTE 224
+ L VE K Y R+INA+ L G + + + K
Sbjct: 232 TILVNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLN 290
Query: 225 TVLIAPGQTTNVLLSAAHATGKYLVAAS 252
+ +AP + ++++ G+ ++ A+
Sbjct: 291 SFSLAPAERYDIIIDFTAYEGESIILAN 318
>pdb|1SDD|B Chain B, Crystal Structure Of Bovine Factor Vai
Length = 647
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
Query: 22 GPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCP--------IQP 73
GP I A DD + V+ N S+H HG+ ++ ++G Y P IQP
Sbjct: 68 GPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYEKS--SEGKTYEDDSPEWFKEDNAIQP 125
Query: 74 GQNYIY 79
+ Y Y
Sbjct: 126 NKTYTY 131
>pdb|1SDD|A Chain A, Crystal Structure Of Bovine Factor Vai
Length = 306
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 11 KPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQC- 69
KP +G GPT+ A D + V N +SIH G++ + +++G +Y
Sbjct: 49 KPQSRTSGLL-GPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSK--FSEGASYSDHTL 105
Query: 70 -------PIQPGQNYIYNFTLAGQRG 88
+ PGQ Y Y + ++ G
Sbjct: 106 PMEKMDDAVAPGQEYTYEWIISEHSG 131
>pdb|1ET8|A Chain A, Crystal Structure Of Nitrite Reductase His255asn Mutant
From Alcaligenes Faecalis
pdb|1J9S|A Chain A, Crystal Structure Of Nitrite Soaked Oxidized H255n Afnir
pdb|1J9S|B Chain B, Crystal Structure Of Nitrite Soaked Oxidized H255n Afnir
pdb|1J9S|C Chain C, Crystal Structure Of Nitrite Soaked Oxidized H255n Afnir
pdb|1J9T|A Chain A, Crystal Structure Of Nitrite Soaked Reduced H255n Afnir
pdb|1J9T|B Chain B, Crystal Structure Of Nitrite Soaked Reduced H255n Afnir
pdb|1J9T|C Chain C, Crystal Structure Of Nitrite Soaked Reduced H255n Afnir
Length = 341
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 62 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 112
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 113 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|2FJS|A Chain A, Crystal Structure Of Anaerobically Reduced Wild Type
Nitrite Reductase From A. Faecalis
pdb|2FJS|B Chain B, Crystal Structure Of Anaerobically Reduced Wild Type
Nitrite Reductase From A. Faecalis
pdb|2FJS|C Chain C, Crystal Structure Of Anaerobically Reduced Wild Type
Nitrite Reductase From A. Faecalis
pdb|2E86|A Chain A, Azide Bound To Copper Containing Nitrite Reductase From A.
Faecalis S- 6
pdb|2E86|B Chain B, Azide Bound To Copper Containing Nitrite Reductase From A.
Faecalis S- 6
pdb|2E86|C Chain C, Azide Bound To Copper Containing Nitrite Reductase From A.
Faecalis S- 6
Length = 337
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 62 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 112
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 113 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1ET7|A Chain A, Crystal Structure Of Nitrite Reductase His255asp Mutant
From Alcaligenes Faecalis S-6
Length = 341
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 62 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 112
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 113 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1L9O|A Chain A, Crystal Structure Of Nitrite Soaked I257a Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalis
pdb|1L9O|B Chain B, Crystal Structure Of Nitrite Soaked I257a Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalis
pdb|1L9O|C Chain C, Crystal Structure Of Nitrite Soaked I257a Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalis
Length = 341
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 62 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 112
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 113 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1L9Q|A Chain A, Crystal Structure Of The I257l Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9Q|B Chain B, Crystal Structure Of The I257l Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9Q|C Chain C, Crystal Structure Of The I257l Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
Length = 341
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 62 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 112
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 113 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1NPJ|A Chain A, Crystal Structure Of H145a Mutant Of Nitrite Reductase
From Alcaligenes Faecalis
pdb|1NPJ|B Chain B, Crystal Structure Of H145a Mutant Of Nitrite Reductase
From Alcaligenes Faecalis
pdb|1NPJ|C Chain C, Crystal Structure Of H145a Mutant Of Nitrite Reductase
From Alcaligenes Faecalis
pdb|1NPN|A Chain A, Crystal Structure Of A Copper Reconstituted H145a Mutant
Of Nitrite Reductase From Alcaligenes Faecalis
pdb|1NPN|B Chain B, Crystal Structure Of A Copper Reconstituted H145a Mutant
Of Nitrite Reductase From Alcaligenes Faecalis
pdb|1NPN|C Chain C, Crystal Structure Of A Copper Reconstituted H145a Mutant
Of Nitrite Reductase From Alcaligenes Faecalis
pdb|2PPD|A Chain A, Oxidized H145a Mutant Of Afnir Bound To Nitric Oxide
pdb|2PPD|B Chain B, Oxidized H145a Mutant Of Afnir Bound To Nitric Oxide
pdb|2PPD|C Chain C, Oxidized H145a Mutant Of Afnir Bound To Nitric Oxide
pdb|2PPE|A Chain A, Reduced H145a Mutant Of Afnir Exposed To No
pdb|2PPE|B Chain B, Reduced H145a Mutant Of Afnir Exposed To No
pdb|2PPE|C Chain C, Reduced H145a Mutant Of Afnir Exposed To No
Length = 343
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 68 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 118
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 119 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWAVVSGMNGAIMVLPREGL 165
>pdb|1L9S|A Chain A, Crystal Structure Of The I257t Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9S|B Chain B, Crystal Structure Of The I257t Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9S|C Chain C, Crystal Structure Of The I257t Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
Length = 341
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 62 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 112
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 113 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1L9R|A Chain A, Crystal Structure Of The I257m Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9R|B Chain B, Crystal Structure Of The I257m Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9R|C Chain C, Crystal Structure Of The I257m Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
Length = 341
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 62 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 112
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 113 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|3H4H|A Chain A, Met94thrPHE312CYS VARIANT OF NITRITE REDUCTASE FROM
Alcaligenes Faecalis
pdb|3H4H|B Chain B, Met94thrPHE312CYS VARIANT OF NITRITE REDUCTASE FROM
Alcaligenes Faecalis
pdb|3H4H|C Chain C, Met94thrPHE312CYS VARIANT OF NITRITE REDUCTASE FROM
Alcaligenes Faecalis
Length = 335
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 61 NGTVPGPLMVVHQDDYLELTLINPETNTLTHNIDFHAATGALGGGGLTE---------IN 111
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 112 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 158
>pdb|1L9T|A Chain A, Crystal Structure Of The I257v Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9T|B Chain B, Crystal Structure Of The I257v Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9T|C Chain C, Crystal Structure Of The I257v Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
Length = 341
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 62 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 112
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 113 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|3H56|A Chain A, Met150leuPHE312CYS VARIANT OF NITRITE REDUCTASE FROM
Alcaligenes Faecalis
Length = 336
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 62 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 112
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 113 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGLNGAIMVLPREGL 159
>pdb|2AFN|A Chain A, Structure Of Alcaligenes Faecalis Nitrite Reductase And A
Copper Site Mutant, M150e, That Contains Zinc
pdb|2AFN|B Chain B, Structure Of Alcaligenes Faecalis Nitrite Reductase And A
Copper Site Mutant, M150e, That Contains Zinc
pdb|2AFN|C Chain C, Structure Of Alcaligenes Faecalis Nitrite Reductase And A
Copper Site Mutant, M150e, That Contains Zinc
pdb|1AQ8|A Chain A, Structure Of Alcaligenes Faecalis Nitrite Reductase
Reduced With Ascorbate
pdb|1AQ8|B Chain B, Structure Of Alcaligenes Faecalis Nitrite Reductase
Reduced With Ascorbate
pdb|1AQ8|C Chain C, Structure Of Alcaligenes Faecalis Nitrite Reductase
Reduced With Ascorbate
pdb|1AS6|A Chain A, Structure Of Nitrite Bound To Oxidized Alcaligenes
Faecalis Nitrite Reductase At Cryo Temperature
pdb|1AS6|B Chain B, Structure Of Nitrite Bound To Oxidized Alcaligenes
Faecalis Nitrite Reductase At Cryo Temperature
pdb|1AS6|C Chain C, Structure Of Nitrite Bound To Oxidized Alcaligenes
Faecalis Nitrite Reductase At Cryo Temperature
pdb|1AS7|A Chain A, Structure Of Alcaligenes Faecalis Nitrite Reductase At
Cryo Temperature
pdb|1AS7|B Chain B, Structure Of Alcaligenes Faecalis Nitrite Reductase At
Cryo Temperature
pdb|1AS7|C Chain C, Structure Of Alcaligenes Faecalis Nitrite Reductase At
Cryo Temperature
pdb|1AS8|A Chain A, Structure Of Nitrite Bound To Reduced Alcaligenes Faecalis
Nitrite Reductase At Cryo Temperature
pdb|1AS8|B Chain B, Structure Of Nitrite Bound To Reduced Alcaligenes Faecalis
Nitrite Reductase At Cryo Temperature
pdb|1AS8|C Chain C, Structure Of Nitrite Bound To Reduced Alcaligenes Faecalis
Nitrite Reductase At Cryo Temperature
Length = 343
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 68 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 118
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 119 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 165
>pdb|1SJM|A Chain A, Nitrite Bound Copper Containing Nitrite Reductase
pdb|1SJM|B Chain B, Nitrite Bound Copper Containing Nitrite Reductase
pdb|1SJM|C Chain C, Nitrite Bound Copper Containing Nitrite Reductase
pdb|1SNR|A Chain A, Nitric Oxide Bound To Cu Nitrite Reductase
pdb|1SNR|B Chain B, Nitric Oxide Bound To Cu Nitrite Reductase
pdb|1SNR|C Chain C, Nitric Oxide Bound To Cu Nitrite Reductase
pdb|2P80|A Chain A, Solution Structure Of The Complex Between Nitrite
Reductase And Pseudoazurin From A. Faecalis
pdb|2P80|B Chain B, Solution Structure Of The Complex Between Nitrite
Reductase And Pseudoazurin From A. Faecalis
pdb|2P80|C Chain C, Solution Structure Of The Complex Between Nitrite
Reductase And Pseudoazurin From A. Faecalis
pdb|2PP7|A Chain A, Crystal Structure Of Anaerobically Manipulated Wild Type
Oxidized Afnir (acetate Bound)
pdb|2PP7|B Chain B, Crystal Structure Of Anaerobically Manipulated Wild Type
Oxidized Afnir (acetate Bound)
pdb|2PP7|C Chain C, Crystal Structure Of Anaerobically Manipulated Wild Type
Oxidized Afnir (acetate Bound)
pdb|2PP8|A Chain A, Formate Bound To Oxidized Wild Type Afnir
pdb|2PP8|B Chain B, Formate Bound To Oxidized Wild Type Afnir
pdb|2PP8|C Chain C, Formate Bound To Oxidized Wild Type Afnir
pdb|2PP9|A Chain A, Nitrate Bound Wild Type Oxidized Afnir
pdb|2PP9|B Chain B, Nitrate Bound Wild Type Oxidized Afnir
pdb|2PP9|C Chain C, Nitrate Bound Wild Type Oxidized Afnir
pdb|2PPA|A Chain A, Anaerobically Manipulated Wild Type Oxidized Afnir Bound
To Nitrous Oxide
pdb|2PPA|B Chain B, Anaerobically Manipulated Wild Type Oxidized Afnir Bound
To Nitrous Oxide
pdb|2PPA|C Chain C, Anaerobically Manipulated Wild Type Oxidized Afnir Bound
To Nitrous Oxide
pdb|2PPC|A Chain A, Oxidized Wild Type Afnir Exposed To No (Nitrite Bound)
pdb|2PPC|B Chain B, Oxidized Wild Type Afnir Exposed To No (Nitrite Bound)
pdb|2PPC|C Chain C, Oxidized Wild Type Afnir Exposed To No (Nitrite Bound)
Length = 341
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 62 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 112
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 113 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1L9P|A Chain A, Crystal Structure Of Nitrite Soaked I257g Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalies S-6
pdb|1L9P|B Chain B, Crystal Structure Of Nitrite Soaked I257g Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalies S-6
pdb|1L9P|C Chain C, Crystal Structure Of Nitrite Soaked I257g Variant Of The
Copper-Containing Nitrite Reductase From Alcaligenes
Faecalies S-6
Length = 341
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 62 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 112
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 113 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|3H4F|A Chain A, Met62leu Variant Of Nitrite Reductase From Alcaligenes
Faeclis
pdb|3H4F|B Chain B, Met62leu Variant Of Nitrite Reductase From Alcaligenes
Faeclis
pdb|3H4F|C Chain C, Met62leu Variant Of Nitrite Reductase From Alcaligenes
Faeclis
Length = 336
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 62 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 112
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 113 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1ET5|A Chain A, Crystal Structure Of Nitrite Reductase Asp98asn Mutant
From Alcaligenes Faecalis S-6
pdb|1J9Q|A Chain A, Crystal Structure Of Nitrite Soaked Oxidized D98n Afnir
pdb|1J9Q|B Chain B, Crystal Structure Of Nitrite Soaked Oxidized D98n Afnir
pdb|1J9Q|C Chain C, Crystal Structure Of Nitrite Soaked Oxidized D98n Afnir
pdb|1J9R|A Chain A, Crystal Structure Of Nitrite Soaked Reduced D98n Afnir
pdb|1J9R|B Chain B, Crystal Structure Of Nitrite Soaked Reduced D98n Afnir
pdb|1J9R|C Chain C, Crystal Structure Of Nitrite Soaked Reduced D98n Afnir
pdb|2PPF|A Chain A, Reduced Mutant D98n Of Afnir Exposed To Nitric Oxide
pdb|2PPF|B Chain B, Reduced Mutant D98n Of Afnir Exposed To Nitric Oxide
pdb|2PPF|C Chain C, Reduced Mutant D98n Of Afnir Exposed To Nitric Oxide
Length = 341
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N++ H + I
Sbjct: 62 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNINFHAATGALGGGGLTE---------IN 112
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 113 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL 159
>pdb|1KCB|A Chain A, Crystal Structure Of A No-Forming Nitrite Reductase
Mutant: An Analog Of A Transition State In Enzymatic
Reaction
Length = 340
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 14 VTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWAD-GPAYITQ 68
+T NG PGP +V E+D V ++++ N + +N+ H P T
Sbjct: 62 MTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATGALGGGALTQVNPGEETT 121
Query: 69 CPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRATVHGAIVILPKRGV 115
+ + ++ + A + G + WH + + ++GAI++LP+ G+
Sbjct: 122 LRFKATKPGVFVYHCAPE-GMVPWH-----VTSGMNGAIMVLPRDGL 162
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 469 GGWTAIRFRADNPGVWFMHCHLEV----HTTWGLKMAFIV 504
G T +RF+A PGV+ HC E H T G+ A +V
Sbjct: 117 GEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMV 156
>pdb|1NIB|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIB|B Chain B, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIB|C Chain C, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|A Chain A, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|B Chain B, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|C Chain C, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2BW4|A Chain A, Atomic Resolution Structure Of Resting State Of The
Achromobacter Cycloclastes Cu Nitrite Reductase
pdb|2BW5|A Chain A, Atomic Resolution Structure Of No-Bound Achromobacter
Cycloclastes Cu Nitrite Reductase
pdb|2BWD|A Chain A, Atomic Resolution Structure Of Achromobacter Cycloclastes
Cu Nitrite Reductase With Endogenously Bound Nitrite And
No
pdb|2BWI|A Chain A, Atomic Resolution Structure Of Nitrite -Soaked
Achromobacter Cycloclastes Cu Nitrite Reductase
pdb|1NIC|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NID|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIE|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIF|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2NRD|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2Y1A|A Chain A, Crystal Structure Of Achromobacter Cycloclastes Cu Nitrite
Reductase With Bound No
Length = 340
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 14 VTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWAD-GPAYITQ 68
+T NG PGP +V E+D V ++++ N + +N+ H P T
Sbjct: 62 MTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATGALGGGALTQVNPGEETT 121
Query: 69 CPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRATVHGAIVILPKRGV 115
+ + ++ + A + G + WH + + ++GAI++LP+ G+
Sbjct: 122 LRFKATKPGVFVYHCAPE-GMVPWH-----VTSGMNGAIMVLPRDGL 162
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 469 GGWTAIRFRADNPGVWFMHCHLEV----HTTWGLKMAFIV 504
G T +RF+A PGV+ HC E H T G+ A +V
Sbjct: 117 GEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMV 156
>pdb|2AVF|A Chain A, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|B Chain B, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|C Chain C, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|D Chain D, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|E Chain E, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|F Chain F, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
Length = 329
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 14 VTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWAD-GPAYITQ 68
+T NG PGP +V E+D V ++++ N + +N+ H P T
Sbjct: 62 MTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATGALGGGALTQVNPGEETT 121
Query: 69 CPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRATVHGAIVILPKRGV 115
+ + ++ + A + G + WH + + ++GAI++LP+ G+
Sbjct: 122 LRFKATKPGVFVYHCAPE-GMVPWH-----VTSGMNGAIMVLPRDGL 162
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 469 GGWTAIRFRADNPGVWFMHCHLEV----HTTWGLKMAFIV 504
G T +RF+A PGV+ HC E H T G+ A +V
Sbjct: 117 GEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMV 156
>pdb|1RZP|A Chain A, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZP|B Chain B, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZP|C Chain C, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZQ|A Chain A, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
pdb|1RZQ|B Chain B, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
pdb|1RZQ|C Chain C, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
Length = 335
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 19/111 (17%)
Query: 14 VTVNGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQC 69
+T NG PGP +V E+D V ++++ N + +N+ H
Sbjct: 62 MTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATGALGGGA---------LT 112
Query: 70 PIQPGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
+ PG+ F A + G +H + W + + ++GAI++LP+ G+
Sbjct: 113 QVNPGEETTLRFK-ATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGL 162
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 469 GGWTAIRFRADNPGVWFMHCHLEV----HTTWGLKMAFIV 504
G T +RF+A PGV+ HC E H T G+ A +V
Sbjct: 117 GEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMV 156
>pdb|2K7Q|A Chain A, Filamin A Ig-Like Domains 18-19
Length = 191
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 59 WADGPAYITQCPIQPGQNYIYNFTLAGQ 86
DG +T CP +PG NYI N A Q
Sbjct: 147 LEDGTCRVTYCPTEPG-NYIINIKFADQ 173
>pdb|1NTD|A Chain A, Structure Of Alcaligenes Faecalis Nitrite Reductase Mutant
M150e That Contains Zinc
Length = 343
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 68 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 118
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + +GAI++LP+ G+
Sbjct: 119 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGENGAIMVLPREGL 165
>pdb|1NEP|A Chain A, Crystal Structure Analysis Of The Bovine Npc2
(Niemann-Pick C2) Protein
pdb|2HKA|A Chain A, Crystal Structure Of Bovine Npc2 And Cholesterol Sulfate
Complex
pdb|2HKA|B Chain B, Crystal Structure Of Bovine Npc2 And Cholesterol Sulfate
Complex
pdb|2HKA|C Chain C, Crystal Structure Of Bovine Npc2 And Cholesterol Sulfate
Complex
Length = 130
Score = 29.3 bits (64), Expect = 5.7, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 17/65 (26%)
Query: 66 ITQCPIQP-----GQNYIYNFTLAGQRGTLWWHAHILWLRATVHGAIVILPKRGVPYPFP 120
++ CP QP GQ+Y N T + +A VHG ++ G+P PFP
Sbjct: 20 VSPCPTQPCKLHRGQSYSVNVTFTS-------NTQSQSSKAVVHGIVM-----GIPVPFP 67
Query: 121 KPHKE 125
P +
Sbjct: 68 IPESD 72
>pdb|1ZDQ|A Chain A, Crystal Structure Of Met150gly Afnir With Methylsulfanyl
Methane Bound
pdb|1ZDQ|B Chain B, Crystal Structure Of Met150gly Afnir With Methylsulfanyl
Methane Bound
pdb|1ZDQ|C Chain C, Crystal Structure Of Met150gly Afnir With Methylsulfanyl
Methane Bound
pdb|1ZDS|A Chain A, Crystal Structure Of Met150gly Afnir With Acetamide Bound
pdb|1ZDS|B Chain B, Crystal Structure Of Met150gly Afnir With Acetamide Bound
pdb|1ZDS|C Chain C, Crystal Structure Of Met150gly Afnir With Acetamide Bound
Length = 336
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 62 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 112
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + +GAI++LP+ G+
Sbjct: 113 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGGNGAIMVLPREGL 159
>pdb|2B08|A Chain A, Reduced Acetamide-Bound M150g Nitrite Reductase From
Alcaligenes Faecalis
pdb|2B08|B Chain B, Reduced Acetamide-Bound M150g Nitrite Reductase From
Alcaligenes Faecalis
pdb|2B08|C Chain C, Reduced Acetamide-Bound M150g Nitrite Reductase From
Alcaligenes Faecalis
Length = 340
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 19/108 (17%)
Query: 17 NGYFPGPTIVAREDDTVLVKVV----NHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQ 72
NG PGP +V +DD + + ++ N + +N+ H + I
Sbjct: 65 NGTVPGPLMVVHQDDYLELTLINPETNTLMHNIDFHAATGALGGGGLTE---------IN 115
Query: 73 PGQNYIYNFTLAGQRGTLWWH----AHILW-LRATVHGAIVILPKRGV 115
PG+ I F A + G +H + W + + +GAI++LP+ G+
Sbjct: 116 PGEKTILRFK-ATKPGVFVYHCAPPGMVPWHVVSGGNGAIMVLPREGL 162
>pdb|2J3S|A Chain A, Crystal Structure Of The Human Filamin A Ig Domains 19
To 21
pdb|2J3S|B Chain B, Crystal Structure Of The Human Filamin A Ig Domains 19
To 21
Length = 288
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 61 DGPAYITQCPIQPGQNYIYNFTLAGQ 86
DG +T CP +PG NYI N A Q
Sbjct: 58 DGTCRVTYCPTEPG-NYIINIKFADQ 82
>pdb|3GYR|A Chain A, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|B Chain B, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|C Chain C, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|D Chain D, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|E Chain E, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|F Chain F, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|G Chain G, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|H Chain H, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|I Chain I, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|J Chain J, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|K Chain K, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|L Chain L, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center
Length = 612
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 16/101 (15%)
Query: 420 IAPENHPLHLHGFNFFEVGRGLGN-------FNSKKDPKKFNLVDPV--------ERNTI 464
++P HP+H+H +F +GR + + P + + PV ++
Sbjct: 489 LSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVF 548
Query: 465 GVPSGGWTAIRFRADNP-GVWFMHCHLEVHTTWGLKMAFIV 504
VP + + D G + HCHL H G+ F+V
Sbjct: 549 QVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVV 589
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,998,307
Number of Sequences: 62578
Number of extensions: 748027
Number of successful extensions: 1812
Number of sequences better than 100.0: 116
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1477
Number of HSP's gapped (non-prelim): 271
length of query: 524
length of database: 14,973,337
effective HSP length: 103
effective length of query: 421
effective length of database: 8,527,803
effective search space: 3590205063
effective search space used: 3590205063
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)