Query 009854
Match_columns 524
No_of_seqs 234 out of 1656
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 14:29:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009854.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009854hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1E-98 3E-103 801.2 50.6 498 2-524 13-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1.1E-93 3.8E-98 755.2 51.2 452 3-509 78-547 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 1.3E-91 4.4E-96 731.6 46.1 449 2-507 13-472 (499)
4 1zpu_A Iron transport multicop 100.0 6.9E-92 2.4E-96 742.8 44.3 451 2-508 12-483 (534)
5 3t6v_A Laccase; beta barrel, o 100.0 8.4E-91 2.9E-95 725.7 50.3 448 2-507 14-472 (495)
6 1v10_A Laccase; multicopper bl 100.0 1.3E-91 4.6E-96 740.0 42.7 462 2-524 33-508 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 1E-89 3.4E-94 723.4 40.1 460 2-524 14-487 (503)
8 2q9o_A Laccase-1; multicopper 100.0 1.6E-89 5.6E-94 729.3 41.4 457 3-508 46-523 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 3.6E-82 1.2E-86 656.1 35.8 391 3-505 27-439 (439)
10 3abg_A Bilirubin oxidase; clea 100.0 6.8E-82 2.3E-86 665.1 37.4 410 3-508 49-477 (534)
11 2uxt_A Protein SUFI, SUFI; oxi 100.0 2.5E-82 8.5E-87 657.8 33.0 396 3-509 29-444 (451)
12 2wsd_A Spore coat protein A; o 100.0 4.3E-81 1.5E-85 659.3 38.8 418 3-506 38-510 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 6E-79 2.1E-83 631.8 36.4 396 7-505 66-480 (481)
14 3gyr_A PHS, phenoxazinone synt 100.0 1E-78 3.4E-83 660.1 38.6 449 2-508 44-593 (612)
15 3aw5_A Multicopper oxidase; be 100.0 3.8E-79 1.3E-83 632.7 33.4 385 14-505 28-448 (448)
16 3od3_A Blue copper oxidase CUE 100.0 1.9E-77 6.4E-82 620.1 31.8 411 4-504 29-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 4.8E-76 1.6E-80 624.5 39.0 426 2-508 44-593 (612)
18 2r7e_A Coagulation factor VIII 100.0 1.4E-55 4.9E-60 479.8 16.2 226 8-255 63-315 (742)
19 3g5w_A Multicopper oxidase typ 100.0 6.3E-52 2.1E-56 410.1 26.7 256 7-277 18-278 (318)
20 2j5w_A Ceruloplasmin, ferroxid 100.0 9.5E-51 3.2E-55 459.7 35.9 235 20-278 92-359 (1065)
21 2zwn_A Two-domain type laccase 100.0 2.2E-50 7.6E-55 403.5 29.8 256 7-277 19-279 (339)
22 2dv6_A Nitrite reductase; elec 100.0 4.5E-49 1.5E-53 410.8 26.2 372 11-509 44-436 (447)
23 3kw8_A Laccase, putative coppe 100.0 1E-48 3.6E-53 380.1 24.1 114 10-131 23-155 (276)
24 3tas_A Small laccase, multi-co 100.0 9.8E-49 3.3E-53 387.0 22.8 161 13-214 32-211 (313)
25 1kbv_A ANIA, major outer membr 100.0 8.8E-47 3E-51 375.6 24.3 244 7-278 54-310 (327)
26 3gdc_A Multicopper oxidase; be 100.0 1.8E-46 6.1E-51 366.7 25.9 219 7-254 50-273 (288)
27 2j5w_A Ceruloplasmin, ferroxid 100.0 1.6E-46 5.5E-51 425.2 23.4 400 8-509 615-1061(1065)
28 3cg8_A Laccase; oxidoreductase 100.0 2.1E-44 7.1E-49 359.6 26.0 109 16-132 70-197 (343)
29 3t9w_A Small laccase, multi-co 100.0 5.7E-44 1.9E-48 350.0 17.7 200 14-254 49-272 (299)
30 2zoo_A Probable nitrite reduct 100.0 4.3E-43 1.5E-47 364.7 22.0 247 6-278 43-300 (442)
31 1mzy_A Copper-containing nitri 100.0 1.5E-41 5.3E-46 339.5 25.6 252 7-278 48-321 (333)
32 2bw4_A Copper-containing nitri 100.0 1.1E-41 3.7E-46 341.8 20.4 256 3-278 51-327 (340)
33 1oe1_A Dissimilatory copper-co 100.0 1.8E-41 6.1E-46 339.7 21.4 255 3-278 45-321 (336)
34 1sdd_B Coagulation factor V; c 100.0 1.1E-40 3.7E-45 361.8 20.4 220 17-254 63-312 (647)
35 1sdd_A Coagulation factor V; c 100.0 1.9E-41 6.5E-46 334.0 8.4 215 11-255 49-286 (306)
36 2dv6_A Nitrite reductase; elec 100.0 1.8E-38 6E-43 330.8 27.2 243 7-278 179-436 (447)
37 2r7e_B Coagulation factor VIII 100.0 2.7E-39 9.2E-44 352.4 8.1 218 19-254 195-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 3.3E-37 1.1E-41 335.6 5.5 218 18-256 447-698 (742)
39 3gdc_A Multicopper oxidase; be 100.0 2.6E-30 9.1E-35 252.2 16.7 233 156-506 55-288 (288)
40 3g5w_A Multicopper oxidase typ 100.0 3.2E-28 1.1E-32 240.3 19.1 243 156-508 23-278 (318)
41 2zwn_A Two-domain type laccase 100.0 4.6E-28 1.6E-32 241.9 19.0 241 156-508 24-279 (339)
42 3t9w_A Small laccase, multi-co 100.0 2.7E-28 9.2E-33 238.8 16.0 218 175-509 57-290 (299)
43 1sdd_A Coagulation factor V; c 99.9 7.6E-26 2.6E-30 222.6 2.9 237 158-507 52-301 (306)
44 1sdd_B Coagulation factor V; c 99.9 2E-22 6.7E-27 218.5 18.2 247 175-506 68-327 (647)
45 1kbv_A ANIA, major outer membr 99.9 4.2E-22 1.4E-26 197.7 18.4 250 156-509 59-310 (327)
46 2bw4_A Copper-containing nitri 99.9 1.3E-21 4.3E-26 195.9 21.5 245 155-509 59-327 (340)
47 2r7e_B Coagulation factor VIII 99.8 1.5E-22 5.3E-27 220.6 4.1 228 174-505 197-455 (770)
48 1mzy_A Copper-containing nitri 99.8 7.4E-20 2.5E-24 182.4 22.5 95 400-509 225-321 (333)
49 1oe1_A Dissimilatory copper-co 99.8 6.8E-19 2.3E-23 175.8 23.0 255 156-523 54-336 (336)
50 2zoo_A Probable nitrite reduct 99.8 2.3E-19 7.7E-24 186.1 17.9 250 156-509 49-300 (442)
51 2uxt_A Protein SUFI, SUFI; oxi 99.8 1.7E-18 5.6E-23 179.2 20.8 208 7-254 178-426 (451)
52 2xu9_A Laccase; oxidoreductase 99.8 1.9E-18 6.6E-23 178.5 19.6 213 8-254 174-425 (439)
53 1hfu_A Laccase 1; oxidoreducta 99.7 1.9E-16 6.6E-21 166.1 22.7 240 11-254 165-455 (503)
54 1v10_A Laccase; multicopper bl 99.7 1.8E-16 6.3E-21 166.9 21.6 223 10-254 190-476 (521)
55 3zx1_A Oxidoreductase, putativ 99.7 3.3E-16 1.1E-20 162.1 20.1 224 8-254 208-466 (481)
56 3od3_A Blue copper oxidase CUE 99.7 2.1E-15 7.3E-20 156.0 19.5 235 8-254 180-475 (488)
57 1zpu_A Iron transport multicop 99.7 5.1E-15 1.8E-19 156.1 22.8 224 10-253 166-465 (534)
58 3t6v_A Laccase; beta barrel, o 99.7 5.8E-15 2E-19 153.8 22.4 241 10-253 167-455 (495)
59 1aoz_A Ascorbate oxidase; oxid 99.6 6.1E-15 2.1E-19 156.6 19.4 211 24-253 205-509 (552)
60 3pxl_A Laccase; 4-copper prote 99.6 1.1E-14 3.7E-19 151.8 20.9 238 10-253 165-455 (499)
61 2g23_A PHS, phenoxazinone synt 99.6 9.9E-15 3.4E-19 154.9 19.8 235 8-254 251-576 (612)
62 2q9o_A Laccase-1; multicopper 99.6 3.6E-14 1.2E-18 150.6 23.3 242 10-254 194-506 (559)
63 3aw5_A Multicopper oxidase; be 99.6 7.6E-15 2.6E-19 151.5 16.7 213 8-254 166-434 (448)
64 3tas_A Small laccase, multi-co 99.6 2.1E-14 7.1E-19 141.4 13.6 218 175-509 41-274 (313)
65 2wsd_A Spore coat protein A; o 99.6 3.4E-14 1.1E-18 149.4 15.7 220 8-254 227-495 (513)
66 3abg_A Bilirubin oxidase; clea 99.5 6.6E-14 2.2E-18 147.4 15.7 218 8-254 198-460 (534)
67 3kw8_A Laccase, putative coppe 99.5 3.5E-14 1.2E-18 137.3 10.7 100 14-115 157-269 (276)
68 3cvb_A Plastocyanin; cupredoxi 99.5 4.2E-15 1.4E-19 121.9 3.5 90 18-111 14-105 (105)
69 3sqr_A Laccase; multicopper ox 99.4 1.4E-11 4.7E-16 130.1 23.6 238 10-253 224-528 (580)
70 3gyr_A PHS, phenoxazinone synt 99.3 1.4E-11 4.8E-16 133.1 17.7 236 8-254 251-576 (612)
71 3cg8_A Laccase; oxidoreductase 99.3 4.8E-12 1.6E-16 125.9 10.2 100 14-115 198-310 (343)
72 2cal_A Rusticyanin; iron respi 99.3 3.1E-12 1.1E-16 111.6 7.8 95 11-110 50-154 (154)
73 1iby_A Nitrosocyanin; RED copp 99.3 3.6E-12 1.2E-16 105.5 7.1 90 8-111 22-112 (112)
74 1fwx_A Nitrous oxide reductase 99.2 1.6E-11 5.5E-16 128.4 9.0 95 8-113 498-594 (595)
75 2aan_A Auracyanin A; cupredoxi 99.2 3.2E-11 1.1E-15 103.8 7.0 95 400-505 35-139 (139)
76 2ov0_A Amicyanin; beta-sandwic 99.1 1.3E-10 4.5E-15 94.7 8.9 80 16-110 26-105 (105)
77 3cvb_A Plastocyanin; cupredoxi 99.1 1.2E-10 4E-15 95.1 7.7 86 400-506 19-105 (105)
78 2gim_A Plastocyanin; beta shee 98.9 1.9E-09 6.5E-14 88.0 8.1 84 22-111 19-106 (106)
79 2aan_A Auracyanin A; cupredoxi 98.9 8.6E-09 3E-13 88.5 10.3 91 19-110 31-139 (139)
80 2gim_A Plastocyanin; beta shee 98.8 6.8E-09 2.3E-13 84.7 7.9 84 401-505 21-105 (106)
81 4hci_A Cupredoxin 1; structura 98.8 1.7E-08 6E-13 81.2 7.9 86 10-110 15-100 (100)
82 1qhq_A Protein (auracyanin); e 98.7 3.2E-08 1.1E-12 85.0 8.2 98 401-505 34-139 (140)
83 2plt_A Plastocyanin; electron 98.6 7.2E-08 2.5E-12 77.2 7.9 80 23-110 18-98 (98)
84 1qhq_A Protein (auracyanin); e 98.6 1.7E-07 5.8E-12 80.4 9.5 92 19-111 29-140 (140)
85 1pcs_A Plastocyanin; electron 98.6 1.9E-07 6.5E-12 74.7 8.4 78 401-505 20-98 (98)
86 2plt_A Plastocyanin; electron 98.5 2E-07 6.7E-12 74.7 8.0 80 401-505 19-98 (98)
87 1pcs_A Plastocyanin; electron 98.5 1.6E-07 5.6E-12 75.1 7.4 81 22-110 18-98 (98)
88 1bxv_A Plastocyanin; copper pr 98.5 2.9E-07 9.9E-12 72.5 7.7 72 401-505 20-91 (91)
89 3tu6_A Pseudoazurin (blue copp 98.5 2.9E-07 9.8E-12 76.9 7.6 76 23-113 23-98 (127)
90 1bxv_A Plastocyanin; copper pr 98.4 3.7E-07 1.3E-11 71.9 6.9 74 22-110 18-91 (91)
91 1b3i_A PETE protein, protein ( 98.4 1.5E-07 5.1E-12 75.2 4.5 78 401-505 20-97 (97)
92 3erx_A Pseudoazurin; copper pr 98.4 6.1E-07 2.1E-11 74.6 8.1 75 23-112 21-95 (123)
93 1b3i_A PETE protein, protein ( 98.4 5E-07 1.7E-11 72.1 7.4 77 23-110 19-97 (97)
94 1kdj_A Plastocyanin; electron 98.4 4.8E-07 1.6E-11 73.0 7.1 78 22-110 16-102 (102)
95 1iby_A Nitrosocyanin; RED copp 98.4 8.3E-07 2.8E-11 72.9 8.7 74 401-506 39-112 (112)
96 4hci_A Cupredoxin 1; structura 98.4 1.3E-06 4.5E-11 70.1 9.0 72 401-505 29-100 (100)
97 1byp_A Protein (plastocyanin); 98.4 1.2E-06 4.2E-11 70.1 8.8 77 23-110 17-99 (99)
98 3ef4_A Pseudoazurin, blue copp 98.4 6.8E-07 2.3E-11 74.2 7.3 75 23-112 22-96 (124)
99 1plc_A Plastocyanin; electron 98.4 1.4E-06 4.8E-11 69.8 8.7 77 23-110 17-99 (99)
100 1byp_A Protein (plastocyanin); 98.3 1.4E-06 4.6E-11 69.8 8.3 82 401-505 18-99 (99)
101 3c75_A Amicyanin; copper prote 98.3 1.8E-06 6.1E-11 73.0 8.7 79 17-110 54-132 (132)
102 1kdj_A Plastocyanin; electron 98.2 1.7E-06 5.9E-11 69.6 6.8 85 400-505 17-102 (102)
103 1id2_A Amicyanin; beta barrel, 98.2 5E-06 1.7E-10 67.4 8.7 79 17-110 28-106 (106)
104 1cuo_A Protein (azurin ISO-2); 98.2 6.1E-06 2.1E-10 69.1 9.1 92 19-111 14-129 (129)
105 1paz_A Pseudoazurin precursor; 98.2 5.9E-06 2E-10 68.7 8.6 76 22-112 20-95 (123)
106 3ay2_A Lipid modified azurin p 98.1 7E-06 2.4E-10 71.6 8.7 97 14-111 47-167 (167)
107 1pmy_A Pseudoazurin; electron 98.1 5.4E-06 1.8E-10 68.9 7.2 77 22-113 20-96 (123)
108 1iuz_A Plastocyanin; electron 98.1 9.3E-06 3.2E-10 64.8 8.2 78 22-110 17-98 (98)
109 2cal_A Rusticyanin; iron respi 98.1 8.1E-06 2.8E-10 70.8 8.2 85 400-505 61-154 (154)
110 1plc_A Plastocyanin; electron 98.1 6.1E-06 2.1E-10 66.0 6.4 83 400-505 17-99 (99)
111 2ccw_A Azurin II, AZN-2; elect 98.0 3E-05 1E-09 64.9 10.3 92 19-111 14-129 (129)
112 2iaa_C Azurin; quinoprotein, t 98.0 3.1E-05 1.1E-09 64.6 9.8 92 19-111 13-128 (128)
113 1nwp_A Azurin; electron transp 98.0 4E-05 1.4E-09 64.0 9.9 91 19-110 14-128 (128)
114 2ux6_A Pseudoazurin; type-1 co 97.9 1.7E-05 5.8E-10 65.8 7.1 74 23-113 21-94 (122)
115 1fwx_A Nitrous oxide reductase 97.9 2.7E-05 9.2E-10 81.6 10.0 78 400-507 513-593 (595)
116 3sbq_A Nitrous-oxide reductase 97.9 1.9E-05 6.5E-10 81.0 8.2 94 5-112 538-638 (638)
117 2ov0_A Amicyanin; beta-sandwic 97.9 3.7E-05 1.3E-09 62.1 8.2 73 400-505 33-105 (105)
118 3fsa_A Azurin; copper, cupredo 97.2 0.0014 4.8E-08 53.7 9.0 89 19-110 14-125 (125)
119 3tu6_A Pseudoazurin (blue copp 97.2 0.00085 2.9E-08 55.8 7.3 75 401-508 24-98 (127)
120 3ef4_A Pseudoazurin, blue copp 97.1 0.0011 3.9E-08 54.6 7.6 75 401-508 23-97 (124)
121 3erx_A Pseudoazurin; copper pr 97.1 0.0018 6.3E-08 53.4 8.6 73 401-506 22-94 (123)
122 1id2_A Amicyanin; beta barrel, 97.1 0.0021 7.1E-08 51.7 8.4 72 401-505 35-106 (106)
123 1iuz_A Plastocyanin; electron 97.0 0.0025 8.5E-08 50.4 8.5 81 400-505 18-98 (98)
124 3c75_A Amicyanin; copper prote 96.9 0.0029 1E-07 53.0 8.4 73 400-505 60-132 (132)
125 1paz_A Pseudoazurin precursor; 96.5 0.011 3.8E-07 48.7 8.4 37 467-507 59-95 (123)
126 3sbq_A Nitrous-oxide reductase 96.4 0.011 3.6E-07 61.0 9.7 79 400-506 558-637 (638)
127 1pmy_A Pseudoazurin; electron 96.4 0.01 3.4E-07 49.0 7.6 38 466-507 58-95 (123)
128 2cua_A Protein (CUA); CUA cent 96.4 0.01 3.5E-07 49.8 7.8 74 23-111 60-135 (135)
129 3ay2_A Lipid modified azurin p 96.2 0.0059 2E-07 53.1 5.6 44 461-505 121-166 (167)
130 3s8f_B Cytochrome C oxidase su 96.2 0.0091 3.1E-07 51.9 6.7 79 18-111 88-168 (168)
131 1cuo_A Protein (azurin ISO-2); 95.8 0.043 1.5E-06 45.5 8.9 91 400-505 18-128 (129)
132 2cua_A Protein (CUA); CUA cent 95.7 0.037 1.3E-06 46.3 8.3 70 402-505 62-134 (135)
133 2ux6_A Pseudoazurin; type-1 co 95.5 0.04 1.4E-06 45.2 7.7 73 400-507 21-93 (122)
134 2ccw_A Azurin II, AZN-2; elect 95.0 0.051 1.8E-06 45.1 6.6 43 462-505 83-128 (129)
135 2iaa_C Azurin; quinoprotein, t 94.8 0.097 3.3E-06 43.3 7.9 43 462-505 82-127 (128)
136 1nwp_A Azurin; electron transp 94.2 0.16 5.4E-06 42.0 7.9 43 462-505 83-128 (128)
137 3s8f_B Cytochrome C oxidase su 94.0 0.21 7.1E-06 43.3 8.4 73 402-506 95-168 (168)
138 3fsa_A Azurin; copper, cupredo 92.9 0.44 1.5E-05 38.9 8.2 97 400-505 18-125 (125)
139 3isy_A Bsupi, intracellular pr 88.3 3.8 0.00013 33.1 9.6 71 182-253 16-101 (120)
140 1cyx_A CYOA; electron transpor 75.3 12 0.0004 33.3 8.4 62 176-256 41-102 (205)
141 3isy_A Bsupi, intracellular pr 66.7 13 0.00045 29.9 6.2 63 32-94 21-99 (120)
142 2gsm_B Cytochrome C oxidase su 59.1 28 0.00097 32.2 7.9 63 176-257 171-233 (262)
143 3hb3_B Cytochrome C oxidase su 55.9 37 0.0013 32.0 8.2 62 176-256 189-250 (298)
144 2r39_A FIXG-related protein; s 55.1 30 0.001 27.5 6.6 47 185-241 34-82 (118)
145 1cyx_A CYOA; electron transpor 47.6 45 0.0015 29.5 6.9 74 400-505 41-115 (205)
146 2p9r_A Alpha-2-M, alpha-2-macr 46.8 40 0.0014 25.8 5.9 68 179-252 12-83 (102)
147 3hb3_B Cytochrome C oxidase su 46.7 55 0.0019 30.8 7.7 77 399-507 188-265 (298)
148 2xzz_A Protein-glutamine gamma 44.1 23 0.0008 27.5 4.0 53 32-90 23-79 (102)
149 1v54_B Cytochrome C oxidase po 41.2 66 0.0023 28.9 7.2 63 176-257 140-202 (227)
150 1xwv_A DER F II; beta sheets, 38.8 51 0.0017 26.6 5.5 69 14-83 16-92 (129)
151 2gsm_B Cytochrome C oxidase su 37.9 86 0.003 28.9 7.5 76 399-506 170-246 (262)
152 2wtp_A ORF131 protein, CZCE; m 35.6 13 0.00044 30.2 1.3 20 177-196 72-91 (131)
153 1fft_B Ubiquinol oxidase; elec 34.5 56 0.0019 31.0 5.8 62 176-256 151-212 (315)
154 3kmh_A D-lyxose isomerase; cup 31.2 44 0.0015 30.1 4.1 50 23-79 129-184 (246)
155 1nep_A EPV20, BNPC2, epididyma 30.4 70 0.0024 25.8 5.1 69 14-83 18-94 (130)
156 1x9u_A Umecyanin; cupredoxin, 28.3 55 0.0019 26.0 3.9 34 475-508 73-107 (116)
157 2hj1_A Hypothetical protein; s 27.5 20 0.0007 27.5 1.1 25 11-35 58-82 (97)
158 2c34_A ICP, inhibitor of cyste 27.2 2.2E+02 0.0074 22.4 7.3 68 22-90 14-89 (116)
159 4ac7_B Urease subunit beta; hy 26.0 90 0.0031 24.9 4.6 59 24-82 18-88 (126)
160 4ubp_B Protein (urease (chain 26.0 90 0.0031 24.9 4.6 59 24-82 18-88 (126)
161 1v54_B Cytochrome C oxidase po 25.2 1.2E+02 0.0042 27.1 6.1 76 399-506 139-215 (227)
162 1jer_A Cucumber stellacyanin; 24.1 94 0.0032 25.5 4.7 33 476-508 77-110 (138)
163 2x3c_A Toxic extracellular end 23.8 2.1E+02 0.0072 27.4 7.9 68 184-253 38-127 (343)
164 1xvs_A Protein APAG; MCSG APC2 22.9 56 0.0019 26.4 3.0 49 185-236 31-83 (126)
165 3rpf_C Molybdopterin convertin 22.4 30 0.001 24.8 1.2 26 10-35 41-67 (74)
166 3rfr_A PMOB; membrane, oxidore 20.7 1.7E+02 0.0058 28.5 6.2 17 67-83 350-366 (419)
167 2f1e_A Protein APAG; APAG prot 20.5 89 0.003 25.2 3.7 49 185-236 32-84 (127)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1e-98 Score=801.20 Aligned_cols=498 Identities=30% Similarity=0.552 Sum_probs=395.6
Q ss_pred cccCCCCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCccccccCCCCCceEEE
Q 009854 2 KNATRLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-YNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYN 80 (524)
Q Consensus 2 ~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~ 80 (524)
+.+++||.++.+|+|||++|||+||+++||+|+|+|+|.|+ ++|+|||||+++..++|+||++++|||+|+||++|+|+
T Consensus 13 ~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~ 92 (552)
T 1aoz_A 13 MFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYN 92 (552)
T ss_dssp EEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEE
T ss_pred EEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcCCCCeEEEE
Confidence 45789999999999999999999999999999999999998 99999999999999999999999999999999999999
Q ss_pred EEeCCcccceeeccChHHHH-hhceeeEEEcCCCCCCCCCCCCCccEEEEeceeecccHHHHHHHHHhcC-CCCCCCceE
Q 009854 81 FTLAGQRGTLWWHAHILWLR-ATVHGAIVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSG-LAPNVSDAH 158 (524)
Q Consensus 81 ~~~~~~~Gt~wyH~H~~~~~-~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g-~~~~~~~~~ 158 (524)
|++ +++||||||||...|. +||+|+|||++++....++ ..|+|++|+++||++.+....+....... .....++.+
T Consensus 93 f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (552)
T 1aoz_A 93 FTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTI 170 (552)
T ss_dssp EEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEE
T ss_pred EEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhcccccCCCCCCeE
Confidence 999 8999999999998887 9999999999986544444 34689999999999988776654332211 111245889
Q ss_pred EEcCCCCCCCCC-------------CCC-----CceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccce
Q 009854 159 TINGHPGPLSSC-------------PSQ-----GGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKP 220 (524)
Q Consensus 159 ~iNG~~~~~~~~-------------~~~-----~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P 220 (524)
+|||+.. ++| +.. ..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 171 liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P 248 (552)
T 1aoz_A 171 LLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQP 248 (552)
T ss_dssp EETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEE
T ss_pred EECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEEECCcccCc
Confidence 9999985 333 322 12379999999999999999999999999999999999999999999
Q ss_pred eEecEEEeCCCceEEEEEEe-CCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCC--CCCCCCCCCCCCccccc
Q 009854 221 FKTETVLIAPGQTTNVLLSA-AHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGST--ATTLTVPPPRNATPVAA 297 (524)
Q Consensus 221 ~~~d~v~l~pgeR~dv~v~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~--~~~~~~~p~~~~~~~~~ 297 (524)
+.++++.|+|||||||+|++ ++.+|+|+|+++... +. .......|+|+|.++.... ....|..|.+++.....
T Consensus 249 ~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~---~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~ 324 (552)
T 1aoz_A 249 FYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH---PNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSK 324 (552)
T ss_dssp EEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC---CCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHH
T ss_pred eEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC---CCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccc
Confidence 99999999999999999999 455799999998753 21 2345678999998765421 12233444444432211
Q ss_pred cccccccccCCCCCCCCCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCC
Q 009854 298 NFTASLRSLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPG 377 (524)
Q Consensus 298 ~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~ 377 (524)
. ..++.+..+. +...+...++++.+.+..+.. . ....|++||++|..|..|+|.+.+.+++|.+..+++.
T Consensus 325 ~--~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~------~-~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~ 394 (552)
T 1aoz_A 325 N--FTYRITAAMG-SPKPPVKFNRRIFLLNTQNVI------N-GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPP 394 (552)
T ss_dssp H--HHTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE------T-TEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCC
T ss_pred c--ccccccccCC-CCCCCCCCcEEEEEEEeeccC------C-CeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCc
Confidence 1 1233333222 333556678888877654331 1 2567999999999999999988777777777766654
Q ss_pred CCCc-cccCCCCCCCCcccCCCceEEEccCCCEEEEEEEcCCCCC---CCCCCeeecCcceEEEeecCCCCCCCCCCCCC
Q 009854 378 NPPV-TYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIA---PENHPLHLHGFNFFEVGRGLGNFNSKKDPKKF 453 (524)
Q Consensus 378 ~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~---~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~ 453 (524)
.++. .|+.... +.+...+.++.++.++.|++|+|+|+|.+.+. ...||||||||+|+||+++.|.|++ .+...+
T Consensus 395 ~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~-~~~~~~ 472 (552)
T 1aoz_A 395 EVFPEDYDIDTP-PTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA-EEESSL 472 (552)
T ss_dssp SCCCTTCCTTSC-CCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCG-GGGGGS
T ss_pred cccccccccccc-cccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCc-cccccc
Confidence 4321 2333211 11223344567889999999999999976433 5679999999999999999898886 445678
Q ss_pred CCCCCCcCceeEecCCcEEEEEEEeCCceeEEEEeechHhhhccceEEEEEcCCCCCCCCCCCCCCCCCCC
Q 009854 454 NLVDPVERNTIGVPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVDNGKGPNESLLPPPSDLPKC 524 (524)
Q Consensus 454 ~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p~~~p~c 524 (524)
|+.+|.|||||.|+++||++|||+|||||.|+|||||+||++.|||++|.|.. ++++++|+++|+|
T Consensus 473 n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~-----~~~~~~P~~~~~C 538 (552)
T 1aoz_A 473 NLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV-----EKVGRIPTKALAC 538 (552)
T ss_dssp CCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECG-----GGCCCCCHHHHSS
T ss_pred ccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCc-----hhhccCCcchhhh
Confidence 89999999999999999999999999999999999999999999999998754 2667789999999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.1e-93 Score=755.16 Aligned_cols=452 Identities=29% Similarity=0.472 Sum_probs=360.9
Q ss_pred ccCCCCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCccccccCCCCCceEEEE
Q 009854 3 NATRLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-YNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNF 81 (524)
Q Consensus 3 ~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~ 81 (524)
.+++||.++.+|+|||++|||+||+++||+|+|+|+|+|+ ++|+|||||+++..++|+||++++|||+|+||++|+|+|
T Consensus 78 ~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq~pI~PG~sftY~f 157 (580)
T 3sqr_A 78 TITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKF 157 (580)
T ss_dssp EECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTBCCBCTTCEEEEEE
T ss_pred EecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccccCCCCCCCeEEEEE
Confidence 4789999999999999999999999999999999999998 899999999999988899999999999999999999999
Q ss_pred EeCCcccceeeccChHHHH-hhceeeEEEcCCCCCCCCCCCCCccE-EEEeceeecccHHHHHHHHHhcCCCCCCCceEE
Q 009854 82 TLAGQRGTLWWHAHILWLR-ATVHGAIVILPKRGVPYPFPKPHKEV-TVILSEWWKSDVEAVINEALKSGLAPNVSDAHT 159 (524)
Q Consensus 82 ~~~~~~Gt~wyH~H~~~~~-~Gl~G~~iV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~ 159 (524)
++ .++||||||||...|+ +||+|+|||+++... .+|+|. +|+++||+++....++...... .+..++.++
T Consensus 158 ~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d~~~l~l~Dw~~~~~~~~~~~~~~~--~~~~~d~~l 229 (580)
T 3sqr_A 158 QV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDEDVGVIFLQDWAHESVFEIWDTARLG--APPALENTL 229 (580)
T ss_dssp EC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHHHHHTTS--CCCCBSEEE
T ss_pred EC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCccceEEEEEEEecCCHHHHHHHHhcc--CCCCCceEE
Confidence 99 6899999999998887 899999999987653 358887 9999999999888776655442 245679999
Q ss_pred EcCCCCCCCCCCC---------CCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCC
Q 009854 160 INGHPGPLSSCPS---------QGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAP 230 (524)
Q Consensus 160 iNG~~~~~~~~~~---------~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~p 230 (524)
|||+.. +.|+. ...+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+++|.|+|
T Consensus 230 iNG~~~--~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~p 307 (580)
T 3sqr_A 230 MNGTNT--FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGI 307 (580)
T ss_dssp ETTBCC--CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESSEEECT
T ss_pred ECCccc--CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCceEeeEEEEcc
Confidence 999965 55542 2458999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccc-cccccccCCC
Q 009854 231 GQTTNVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANF-TASLRSLNSK 309 (524)
Q Consensus 231 geR~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~l~~l~~~ 309 (524)
||||||+|++++++|+|||++....+|. .........|||+|.++.... |..+.+.....+... ...|.++
T Consensus 308 GqRydVlv~a~~~~g~Y~i~a~~~~~~~-~~~~~~~~~aiL~Y~~~~~~~----P~~~~~~~~~~~~~~~~~~L~P~--- 379 (580)
T 3sqr_A 308 GQRYDVIVEANAAADNYWIRGNWGTTCS-TNNEAANATGILRYDSSSIAN----PTSVGTTPRGTCEDEPVASLVPH--- 379 (580)
T ss_dssp TCEEEEEEECCSCSSEEEEECCCCTTTS-CBTTGGGCEEEEESSTTCCCC----CCCCCCCCCCCSCCSCGGGCCBS---
T ss_pred ceEEEEEEEeCCCCCeEEEEEecccccC-ccCCCCceEEEEEECCCCCCC----CCCCCCCccchhhcccccccccC---
Confidence 9999999999998899999998765553 112234679999998754322 112222111111100 0123222
Q ss_pred CCCCCCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeec-CcchhhhhhhccccccccCCCCCCCCccccCCCC
Q 009854 310 KYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVM-PTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGT 388 (524)
Q Consensus 310 ~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~-p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~ 388 (524)
.+..++...+.++.+.++ .+..+.|++||++|.. ++.|.|.+.+. |. .+|+.
T Consensus 380 -~~~~~~~~~~~~~~l~~~----------~~~~~~w~iN~~s~~~~~~~P~L~~~~~---g~--~~~~~----------- 432 (580)
T 3sqr_A 380 -LALDVGGYSLVDEQVSSA----------FTNYFTWTINSSSLLLDWSSPTTLKIFN---NE--TIFPT----------- 432 (580)
T ss_dssp -SCCBCCSEEEEEEEEEEE----------ESSSEEEEETTBCCCCCTTSCHHHHHHT---TC--CCCCG-----------
T ss_pred -CCCCCCCccceEEEEEec----------cCCceeEEECCEecccCCCCCchhhhhc---CC--ccCCC-----------
Confidence 222344344444444432 1236789999999975 46666655331 21 12211
Q ss_pred CCCCcccCCCceEEEc----cCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCcee
Q 009854 389 QPANFQTNNGTRIYRL----PYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTI 464 (524)
Q Consensus 389 ~~~~~~~~~~~~~~~~----~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv 464 (524)
...++.+ +.|++|||+|+|.+.. ...||||||||+|+||++|.|.|++..+...+|+.||++||||
T Consensus 433 ---------~~~~~~~~~~~~~~~~VeiVi~n~~~~-~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv 502 (580)
T 3sqr_A 433 ---------EYNVVALEQTNANEEWVVYVIEDLTGF-GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVA 502 (580)
T ss_dssp ---------GGCEEEECC----CCEEEEEEEECSSS-CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEE
T ss_pred ---------CcceeecccccCCCcEEEEEEeCCCcc-ccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEE
Confidence 1233444 4699999999996522 5789999999999999999999998776778999999999999
Q ss_pred EecCCcEEEEEEEeCCceeEEEEeechHhhhccceEEEEEcCCCC
Q 009854 465 GVPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVDNGKG 509 (524)
Q Consensus 465 ~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 509 (524)
.|+++||++|||++||||.|+|||||+||++.||+++|.+...+.
T Consensus 503 ~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~~i 547 (580)
T 3sqr_A 503 ALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQSSI 547 (580)
T ss_dssp EECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGGGC
T ss_pred EeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHHHH
Confidence 999999999999999999999999999999999999999865443
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=1.3e-91 Score=731.62 Aligned_cols=449 Identities=28% Similarity=0.523 Sum_probs=350.2
Q ss_pred cccCCCCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCC-----CceEEecCccccCCCCCCCCCccccccCCCCCc
Q 009854 2 KNATRLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKY-----NVSIHWHGVRQLRTCWADGPAYITQCPIQPGQN 76 (524)
Q Consensus 2 ~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~ 76 (524)
+.++|||.++.+|+|||++|||+||+++||+|+|+|+|+|++ +|+|||||+++..++|+||++++|||+|+||++
T Consensus 13 ~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~s 92 (499)
T 3pxl_A 13 AAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHS 92 (499)
T ss_dssp EEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCE
T ss_pred EEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCe
Confidence 467999999999999999999999999999999999999984 799999999999888999999999999999999
Q ss_pred eEEEEEeCCcccceeeccChHHHH-hhceeeEEEcCCCCCC-CCCCCCCccEEEEeceeecccHHHHHHHHHhcCCCCCC
Q 009854 77 YIYNFTLAGQRGTLWWHAHILWLR-ATVHGAIVILPKRGVP-YPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNV 154 (524)
Q Consensus 77 ~~y~~~~~~~~Gt~wyH~H~~~~~-~Gl~G~~iV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~ 154 (524)
|+|+|++++++||||||||...|. +||+|+|||+++.+.. ..+...++|++|+++||+++.... .+..+..
T Consensus 93 ~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~-------~~~~p~~ 165 (499)
T 3pxl_A 93 FLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL-------GPRFPGG 165 (499)
T ss_dssp EEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-------SCSSCSS
T ss_pred EEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-------ccCCCCC
Confidence 999999977899999999998887 9999999999876421 112223567899999999876532 2334457
Q ss_pred CceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceE
Q 009854 155 SDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTT 234 (524)
Q Consensus 155 ~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~ 234 (524)
+++++|||+.. +..+.....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+++|.|+|||||
T Consensus 166 ~d~~liNG~~~-~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGR-APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCC-CTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCc-CCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEEECCCcEE
Confidence 79999999854 22233345689999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCC-
Q 009854 235 NVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPA- 313 (524)
Q Consensus 235 dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~- 313 (524)
||+|++++++|+|+|++.....+. .+.+....|+|+|.++....+.. +..+ ... .....+|.++.....|.
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~--~~~~~~~~ail~Y~~~~~~~p~~-~~~~---~~~--~~~~~~L~p~~~~~~p~~ 316 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNV--GFDGGINSAILRYDGAPAVEPTT-NQTT---SVK--PLNEVDLHPLVSTPVPGA 316 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSC--SCGGGTTEEEEEETTSCSSCCCC-CCCC---CSS--BCCGGGCCBSSCCCCSSC
T ss_pred EEEEECCCCCceEEEEEecccCcc--ccCCCceEEEEEeCCCCCCCCCC-CCCC---CCc--ccccccccccccccCCCc
Confidence 999999987799999998654432 23333458999998764322111 1111 100 00112355543322221
Q ss_pred CCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCCCCCCCCc
Q 009854 314 RVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANF 393 (524)
Q Consensus 314 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~ 393 (524)
..+..+|+++.+.+.+. +. .|++||++|..|+.|.|.+.. +|.+...
T Consensus 317 ~~~~~~d~~~~l~~~~~---------~~--~w~iNg~s~~~~~~P~L~~~~---~g~~~~~------------------- 363 (499)
T 3pxl_A 317 PSSGGVDKAINMAFNFN---------GS--NFFINGASFVPPTVPVLLQIL---SGAQTAQ------------------- 363 (499)
T ss_dssp SSTTCSSEEEECCEEEC---------SS--CEEETTBCCCCCSSCHHHHHH---TTCCSTT-------------------
T ss_pred ccCCCCcEEEEEEEEec---------Cc--EEEEcCEecCCCCCchhhhhh---cCCcccc-------------------
Confidence 13345677776655432 12 489999999988877765532 1211100
Q ss_pred ccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecC---Cc
Q 009854 394 QTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPS---GG 470 (524)
Q Consensus 394 ~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp---~g 470 (524)
.......++.++.|++|||+|+|.+......||||||||+|+||+.+. ...+|+.+|.+||||.|++ ++
T Consensus 364 ~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g--------~~~~n~~~P~~rDtv~v~~~~pg~ 435 (499)
T 3pxl_A 364 DLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG--------STVYNYDNPIFRDVVSTGTPAAGD 435 (499)
T ss_dssp TSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT--------CCCCCSSSCCEESEEECCCGGGTC
T ss_pred ccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC--------CcccccCCCCccceEEcCCcCCCc
Confidence 001234578999999999999953323567899999999999998642 2357889999999999997 99
Q ss_pred EEEEEEEeCCceeEEEEeechHhhhccceEEEEEcCC
Q 009854 471 WTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVDNG 507 (524)
Q Consensus 471 ~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 507 (524)
|++|||++||||.|+|||||+||++.||+++|.+...
T Consensus 436 ~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~ 472 (499)
T 3pxl_A 436 NVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDTP 472 (499)
T ss_dssp EEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEESGG
T ss_pred EEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEChh
Confidence 9999999999999999999999999999999976543
No 4
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-92 Score=742.84 Aligned_cols=451 Identities=27% Similarity=0.411 Sum_probs=353.0
Q ss_pred cccCCCC-ccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCccccccCCCCCceEE
Q 009854 2 KNATRLC-STKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-YNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIY 79 (524)
Q Consensus 2 ~~~~~~g-~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y 79 (524)
+.++||| .++.+|+|||++|||+||+++||+|+|+|+|+|+ ++|+|||||+++..++|+||++++|||+|+||++|+|
T Consensus 12 ~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y 91 (534)
T 1zpu_A 12 DYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLY 91 (534)
T ss_dssp EEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEE
T ss_pred EEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcCCCCeEEE
Confidence 3578999 8999999999999999999999999999999998 9999999999999888999999999999999999999
Q ss_pred EEEeCCcccceeeccChHHHH-hhceeeEEEcCCCCCCCCCCCCCccEEEEeceeecccHHHHHHHHHhc---CCCCCCC
Q 009854 80 NFTLAGQRGTLWWHAHILWLR-ATVHGAIVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKS---GLAPNVS 155 (524)
Q Consensus 80 ~~~~~~~~Gt~wyH~H~~~~~-~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~---g~~~~~~ 155 (524)
+|++.+++||||||||.+.|. +||+|+|||+++.. ++ .+|+|++|+++||+++....+...+... .+....+
T Consensus 92 ~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~ 167 (534)
T 1zpu_A 92 NFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIP 167 (534)
T ss_dssp EEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCC
T ss_pred EEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhccccCCCCCCCC
Confidence 999966999999999999887 89999999999864 22 4689999999999999888766554321 1233467
Q ss_pred ceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceEE
Q 009854 156 DAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTN 235 (524)
Q Consensus 156 ~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~d 235 (524)
+.++|||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+++|.|+||||||
T Consensus 168 d~~liNG~~~----------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~d 237 (534)
T 1zpu_A 168 QNLIVNNTMN----------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYT 237 (534)
T ss_dssp SEEEETTBSS----------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEE
T ss_pred ceEEECCCCc----------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECccceEE
Confidence 9999999975 789999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCC-CCceEEEEeeCCCCCc--cccCCCCeEEEEEEcCCCCCCCCC-CCCCCC-CCCccccccccccccccCCCC
Q 009854 236 VLLSAAHA-TGKYLVAASPFLDTPA--ILVDNKTATATVHYSGTLGSTATT-LTVPPP-RNATPVAANFTASLRSLNSKK 310 (524)
Q Consensus 236 v~v~~~~~-~g~~~~~~~~~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~-~~~~p~-~~~~~~~~~~~~~l~~l~~~~ 310 (524)
|+|++++. .|+|+|++.....+.. .........++|+|.++...+.+. ...++. .++ ..++++..
T Consensus 238 vlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~--------~~l~p~~~-- 307 (534)
T 1zpu_A 238 VLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDD--------FYLQPYEK-- 307 (534)
T ss_dssp EEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCG--------GGCCBSSC--
T ss_pred EEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCccccccccccc--------ccceeCCC--
Confidence 99999865 3789999875432110 011234568999998754321110 111111 010 11332211
Q ss_pred CCCCCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCCCCCC
Q 009854 311 YPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQP 390 (524)
Q Consensus 311 ~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~ 390 (524)
..++..+++++.+.+.+... .++ ...|.+||++|..++.|.|.+.+.. +.+. ..+.
T Consensus 308 --~~~~~~~~~~~~l~~~~~~~-----~~~-~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~----~~~~---------- 363 (534)
T 1zpu_A 308 --EAIYGEPDHVITVDVVMDNL-----KNG-VNYAFFNNITYTAPKVPTLMTVLSS--GDQA----NNSE---------- 363 (534)
T ss_dssp --CCCCCSCSEEEEEEEEEEEC-----TTS-CEEEEETTBCCCCCSSCHHHHHTTS--GGGT----TCGG----------
T ss_pred --CCCCCCCCeEEEEEEEeecc-----CCc-eeEEEECCCcccCCCCCceeeeccc--Cccc----CCCc----------
Confidence 12334567887777655321 022 3458899999999888776653211 1111 0000
Q ss_pred CCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCC----------CCCCCCCCCCCCCCCCCc
Q 009854 391 ANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLG----------NFNSKKDPKKFNLVDPVE 460 (524)
Q Consensus 391 ~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g----------~~~~~~~~~~~~~~~p~~ 460 (524)
....++..+.++.|++|+|+|+|.+ .+.||||||||+|+||+++.+ .|++.. .. ....+|.|
T Consensus 364 ---~~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~-~~-~~~~~p~~ 435 (534)
T 1zpu_A 364 ---IYGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDN-HP-AFPEYPMR 435 (534)
T ss_dssp ---GGCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTB-CC-CCCSSCEE
T ss_pred ---ccCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCccccccCcccccCccc-cc-cccCCCCe
Confidence 1122356789999999999999964 678999999999999999864 344321 11 22568999
Q ss_pred CceeEecCCcEEEEEEEeCCceeEEEEeechHhhhccceEEEEEcCCC
Q 009854 461 RNTIGVPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVDNGK 508 (524)
Q Consensus 461 rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 508 (524)
||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+.+
T Consensus 436 RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~ 483 (534)
T 1zpu_A 436 RDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFG 483 (534)
T ss_dssp ESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHH
T ss_pred eeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECccc
Confidence 999999999999999999999999999999999999999999886543
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=8.4e-91 Score=725.65 Aligned_cols=448 Identities=28% Similarity=0.486 Sum_probs=348.4
Q ss_pred cccCCCCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCC-----CceEEecCccccCCCCCCCCCccccccCCCCCc
Q 009854 2 KNATRLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKY-----NVSIHWHGVRQLRTCWADGPAYITQCPIQPGQN 76 (524)
Q Consensus 2 ~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~ 76 (524)
+.++|||.++.+|+|||++|||+||+++||+|+|+|+|+|++ +|+|||||+++..++|+||++++|||+|+||++
T Consensus 14 ~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~s 93 (495)
T 3t6v_A 14 ADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVGNS 93 (495)
T ss_dssp EEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCE
T ss_pred EEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCe
Confidence 468999999999999999999999999999999999999985 799999999999888999999999999999999
Q ss_pred eEEEEEeCCcccceeeccChHHHH-hhceeeEEEcCCCCCC-CCCCCCCccEEEEeceeecccHHHHHHHHHhcCCCCCC
Q 009854 77 YIYNFTLAGQRGTLWWHAHILWLR-ATVHGAIVILPKRGVP-YPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNV 154 (524)
Q Consensus 77 ~~y~~~~~~~~Gt~wyH~H~~~~~-~Gl~G~~iV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~ 154 (524)
|+|+|++++++||||||||...|. +||+|+|||+++.+.. .++...++|++|+++||+++....+ .+..+..
T Consensus 94 ftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~------~~~~p~~ 167 (495)
T 3t6v_A 94 FSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM------GAGGAIT 167 (495)
T ss_dssp EEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS------CSSSCCC
T ss_pred EEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh------ccCCCCC
Confidence 999999977899999999998887 9999999999876421 1122235678999999999876431 2233457
Q ss_pred CceEEEcCCCCCCCCCC--CCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCc
Q 009854 155 SDAHTINGHPGPLSSCP--SQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQ 232 (524)
Q Consensus 155 ~~~~~iNG~~~~~~~~~--~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pge 232 (524)
+++++|||+.. +.|. ....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+++|.|+|||
T Consensus 168 ~d~~liNG~g~--~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 168 ADSTLIDGLGR--THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CSEEEETTBCC--BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTC
T ss_pred CcEEEECCcCc--CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCce
Confidence 89999999953 3333 2355789999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCC
Q 009854 233 TTNVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYP 312 (524)
Q Consensus 233 R~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p 312 (524)
||||+|++++++|+|+|++.....+. .+.+....|+|+|.++....+.. +. +.. .. .......|.++.....|
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~--~~~~~~~~ail~Y~~~~~~~p~~-~~-~~~-~~--~~~~~~~L~p~~~~~~p 318 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGE--GFDGGINSAILRYDGATTADPVT-VA-STV-HT--KCLIETDLHPLSRNGVP 318 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSC--SCGGGTTEEEEEETTSCSSCCCC-CC-CSS-CS--SBCCGGGCCBSSCCCCS
T ss_pred EEEEEEECCCCCceEEEEEecccCcc--ccCCCceEEEEEECCCCCCCCCC-CC-CCC-Cc--cccccccccccccccCC
Confidence 99999999987799999998754433 23333457999998764322111 10 000 00 00011234444322222
Q ss_pred C-CCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCCCCCCC
Q 009854 313 A-RVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPA 391 (524)
Q Consensus 313 ~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~ 391 (524)
. ..+..+++++.+.+.+. +. .|++||++|..++.|.|.+.. +|.+...
T Consensus 319 ~~~~~~~~d~~~~l~~~~~---------~~--~w~iNg~s~~~~~~P~L~~~~---~g~~~~~----------------- 367 (495)
T 3t6v_A 319 GNPHQGGADCNLNLSLGFA---------CG--NFVINGVSFTPPTVPVLLQIC---SGANTAA----------------- 367 (495)
T ss_dssp SCSSTTCSSEEEECCEEEE---------TT--EEEETTBCCCCCSSCHHHHHH---TTCCSST-----------------
T ss_pred CccCCCCCcEEEEEEEEec---------Cc--EEEEcCEecCCCCCcchhhhh---cCCcCcc-----------------
Confidence 1 12345677766555432 12 589999999988877665532 1211100
Q ss_pred CcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecC-Cc
Q 009854 392 NFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPS-GG 470 (524)
Q Consensus 392 ~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp-~g 470 (524)
.......++.++.|++|||+|+|. .....||||||||+|+||+++. ...+|+.+|.+||||.|++ |+
T Consensus 368 --~~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~g--------~~~~n~~~P~~rDtv~v~~~g~ 435 (495)
T 3t6v_A 368 --DLLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESAS--------NSTSNYDDPIWRDVVSIGGVGD 435 (495)
T ss_dssp --TSSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECTT--------CCCCCSSSCCEESEEECCSTTC
T ss_pred --cccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecCC--------CCCcccCCCCCccEEEcCCCCc
Confidence 001134578999999999999842 2467899999999999998642 2356888999999999997 89
Q ss_pred EEEEEEEeCCceeEEEEeechHhhhccceEEEEEcCC
Q 009854 471 WTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVDNG 507 (524)
Q Consensus 471 ~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 507 (524)
|++|||++||||.|+|||||++|++.||+++|.+.+.
T Consensus 436 ~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~ 472 (495)
T 3t6v_A 436 NVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIP 472 (495)
T ss_dssp EEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETHH
T ss_pred EEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEEChh
Confidence 9999999999999999999999999999999976543
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.3e-91 Score=740.03 Aligned_cols=462 Identities=29% Similarity=0.492 Sum_probs=352.6
Q ss_pred cccCCCCc-cccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC-----CCceEEecCccccCCCCCCCCCccccccCCCCC
Q 009854 2 KNATRLCS-TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-----YNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQ 75 (524)
Q Consensus 2 ~~~~~~g~-~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-----~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~ 75 (524)
+++++||+ .+.+|+|||++|||+||+++||+|+|+|+|+|+ ++|+|||||+++...+|+||++++|||+|+||+
T Consensus 33 ~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~ 112 (521)
T 1v10_A 33 ANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNE 112 (521)
T ss_dssp EEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTE
T ss_pred EEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcceeeCCcCCCC
Confidence 35789999 999999999999999999999999999999998 999999999999888899999999999999999
Q ss_pred ceEEEEEeCCcccceeeccChHHHH-hhceeeEEEcCCCCC-CCCCCCCCccEEEEeceeecccHHHHHHHHHhcCCCCC
Q 009854 76 NYIYNFTLAGQRGTLWWHAHILWLR-ATVHGAIVILPKRGV-PYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPN 153 (524)
Q Consensus 76 ~~~y~~~~~~~~Gt~wyH~H~~~~~-~Gl~G~~iV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~ 153 (524)
+|+|+|++.+++||||||||.+.|. +||+|+|||+++.+. ..+++..++|++|+++||+++....+.. ..+....
T Consensus 113 s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~~~~---~~~~~~~ 189 (521)
T 1v10_A 113 SFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTVLFP---NPNKAPP 189 (521)
T ss_dssp EEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC----------CCCS
T ss_pred eEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHHHhh---ccCCCCC
Confidence 9999999768999999999999887 899999999987632 1122223479999999999987655432 1122334
Q ss_pred CCceEEEcCCCCCCCCCC--CCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCC
Q 009854 154 VSDAHTINGHPGPLSSCP--SQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPG 231 (524)
Q Consensus 154 ~~~~~~iNG~~~~~~~~~--~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pg 231 (524)
.++.++|||+.+ +.|. ....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|+.++++.|+||
T Consensus 190 ~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pg 267 (521)
T 1v10_A 190 APDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAG 267 (521)
T ss_dssp CCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTT
T ss_pred CCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccccceeeeeEEEccc
Confidence 579999999975 4554 234489999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCC
Q 009854 232 QTTNVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKY 311 (524)
Q Consensus 232 eR~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~ 311 (524)
|||||+|++++++|+|+|++.....+. .+......++|+|.++....+.. +.. +.... ...++.++.....
T Consensus 268 qR~dvlv~~~~~~g~y~i~~~~~~~~~--~~~~~~~~ail~y~~~~~~~p~~----~~~-~~~~~--~~~~l~p~~~~~~ 338 (521)
T 1v10_A 268 QRYSVVVEANQAVGNYWIRANPSNGRN--GFTGGINSAIFRYQGAAVAEPTT----SQN-SGTAL--NEANLIPLINPGA 338 (521)
T ss_dssp CEEEEEEECCSCSSEEEEEEEESSSSC--SCGGGTTEEEEEETTCCSCCCCC----CCC-CSCBC--CGGGCCBSSCCCC
T ss_pred ceEEEEEEcCCCCCceeeeeccccccc--cCCCCceeEEEEECCCCCCCCCC----CCC-ccccc--chhhcccCCcccC
Confidence 999999999987799999998654322 12222346999998765432111 100 00000 0123433322222
Q ss_pred CC-CCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhcccccccc-CCCCCCCCccccCCCCC
Q 009854 312 PA-RVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFT-DDFPGNPPVTYNFTGTQ 389 (524)
Q Consensus 312 p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~-~~~~~~~p~~~~~~~~~ 389 (524)
|. ..+...++++.+.+.. ++....|+|||++|..+..|.+.+... |.+. .+
T Consensus 339 p~~~~~~~~~~~~~l~~~~---------~~~~~~~~iNg~~~~~~~~P~l~~~~~---g~~~~~~--------------- 391 (521)
T 1v10_A 339 PGNPVPGGADINLNLRIGR---------NATTADFTINGAPFIPPTVPVLLQILS---GVTNPND--------------- 391 (521)
T ss_dssp SSCSSTTCSSEEEECCEEC---------CSSSSCCEESSCCCCCCSSCHHHHHHH---TCCCGGG---------------
T ss_pred CCcccCCcceEEEEEEEec---------CCceeEEEECCCcccCCCCchhhhhhc---CCccccc---------------
Confidence 21 1122345555443322 122235899999999887766655321 2110 01
Q ss_pred CCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEe-cC
Q 009854 390 PANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGV-PS 468 (524)
Q Consensus 390 ~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v-pp 468 (524)
...+..++.++.|++|||+++| .+.||||||||+|+||+++.+. .+++.+|.|||||.| ++
T Consensus 392 -----~~~~~~~~~v~~g~~vei~l~N-----~~~HP~HLHGh~F~Vl~~~~~~--------~~n~~~p~~rDTV~V~p~ 453 (521)
T 1v10_A 392 -----LLPGGAVISLPANQVIEISIPG-----GGNHPFHLHGHNFDVVRTPGSS--------VYNYVNPVRRDVVSIGGG 453 (521)
T ss_dssp -----SSSTTTEEEECTTCEEEEEEEC-----CBSCEEEESSCCEEEEECTTCS--------CCCCSSCCEESEEECCBS
T ss_pred -----CCCCceEEEecCCCEEEEEEcC-----CCCCCEEEccceEEEEecCCCC--------ccccCCCCeeeeEEeCCC
Confidence 1124567899999999999998 4689999999999999997542 357789999999999 89
Q ss_pred CcEEEEEEEeCCceeEEEEeechHhhhccceEEEEEcCCCCCCCCCCCCC-CCCCCC
Q 009854 469 GGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVDNGKGPNESLLPPP-SDLPKC 524 (524)
Q Consensus 469 ~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p-~~~p~c 524 (524)
++|++|||++||||.|+|||||+||++.|||++|.|.+.+. .++.++| ...+.|
T Consensus 454 gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~--~~~~~~p~~~~~~C 508 (521)
T 1v10_A 454 GDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNI--PIANAISPAWDDLC 508 (521)
T ss_dssp SCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGH--HHHSCCCHHHHTHH
T ss_pred CcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcch--hhccCCChHHhhhc
Confidence 99999999999999999999999999999999999876543 2344344 456666
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=1e-89 Score=723.36 Aligned_cols=460 Identities=30% Similarity=0.526 Sum_probs=350.4
Q ss_pred cccCCCCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC-----CCceEEecCccccCCCCCCCCCccccccCCCCCc
Q 009854 2 KNATRLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-----YNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQN 76 (524)
Q Consensus 2 ~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-----~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~ 76 (524)
..+++||+++.+|+|||++ ||+||+++||+|+|+|+|+|+ ++|+|||||+++...+|+||++++|||+|.||++
T Consensus 14 ~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~~ 92 (503)
T 1hfu_A 14 ANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHA 92 (503)
T ss_dssp EEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCE
T ss_pred EEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCCcCCCCe
Confidence 3578999999999999999 999999999999999999998 9999999999998888899999999999999999
Q ss_pred eEEEEEeCCcccceeeccChHHHH-hhceeeEEEcCCCCC-CCCCCCCCccEEEEeceeecccHHHHHHHHHhcCCCCCC
Q 009854 77 YIYNFTLAGQRGTLWWHAHILWLR-ATVHGAIVILPKRGV-PYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNV 154 (524)
Q Consensus 77 ~~y~~~~~~~~Gt~wyH~H~~~~~-~Gl~G~~iV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~ 154 (524)
|+|+|++.+++||||||||.+.|. +||+|+|||+++.+. ..++...++|++|+++||+++...++. + ...
T Consensus 93 ~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~------~--~~~ 164 (503)
T 1hfu_A 93 FLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ------G--AAQ 164 (503)
T ss_dssp EEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC-----------C
T ss_pred EEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc------C--CCC
Confidence 999999768999999999999887 899999999987632 112222346999999999998765421 1 134
Q ss_pred CceEEEcCCCCCCCCCCC-CCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCce
Q 009854 155 SDAHTINGHPGPLSSCPS-QGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQT 233 (524)
Q Consensus 155 ~~~~~iNG~~~~~~~~~~-~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR 233 (524)
++.++|||+.. +.|.. ...+.++|++|++|||||||+|+.+.+.|+|+||+|+||+.||.+++|+.++++.|+||||
T Consensus 165 ~d~~liNG~~~--~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR 242 (503)
T 1hfu_A 165 PDATLINGKGR--YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQR 242 (503)
T ss_dssp CSEEEETTBCC--BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECcccc--cCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeEEEcccce
Confidence 68999999975 56653 3458999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCCceEEEEeeCCCCCcc---ccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCC
Q 009854 234 TNVLLSAAHATGKYLVAASPFLDTPAI---LVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKK 310 (524)
Q Consensus 234 ~dv~v~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~ 310 (524)
|||+|++++++|+|+|++.....+. . .+......++|+|.++....+. .+..+...... ...|.++....
T Consensus 243 ~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~~~~~ail~y~~~~~~~p~-~~~~~~~~~l~-----~~~l~p~~~~~ 315 (503)
T 1hfu_A 243 YSFVLDANQPVDNYWIRAQPNKGRN-GLAGTFANGVNSAILRYAGAANADPT-TSANPNPAQLN-----EADLHALIDPA 315 (503)
T ss_dssp EEEEEECCSCSSEEEEEEEESSCGG-GGGGCCGGGTTEEEEEETTSCSSCCC-CCCCSSCCBCC-----GGGCBBSSSCS
T ss_pred EEEEEEcCCCccceeeeeccccCCc-ccccccCCCceEEEEEECCCCCCCCC-CCCCCccCCCc-----cccccccCccC
Confidence 9999999987799999998653321 1 1222234799999876442111 11111100000 12344332222
Q ss_pred CCC-CCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCCCCC
Q 009854 311 YPA-RVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQ 389 (524)
Q Consensus 311 ~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~ 389 (524)
.|. ..+...+.++.+.+.. ++. .|+|||++|..+..|.|.+.. +|.+..
T Consensus 316 ~p~~~~~~~~~~~~~l~~~~---------~~~--~~~iNg~~~~~~~~P~l~~~~---~g~~~~---------------- 365 (503)
T 1hfu_A 316 APGIPTPGAADVNLRFQLGF---------SGG--RFTINGTAYESPSVPTLLQIM---SGAQSA---------------- 365 (503)
T ss_dssp CSSCSSTTCSSEEEECCEEE---------ETT--EEEETTBCCCCCSSCHHHHHH---TTCCSG----------------
T ss_pred CCCcccCCcceEEEEEEeec---------cCc--eEEECCCccCCCCCcchhhhh---cCCccc----------------
Confidence 221 1122344444333221 122 589999999988777665532 121100
Q ss_pred CCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEe-cC
Q 009854 390 PANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGV-PS 468 (524)
Q Consensus 390 ~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v-pp 468 (524)
.....+..++.++.|++|||+++|.. ..+.||||||||+|+||+++.+. .+++.+|.|||||.| ++
T Consensus 366 ---~~~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~~--------~~n~~~p~~rDTV~V~pp 432 (503)
T 1hfu_A 366 ---NDLLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGSS--------TYNFVNPVKRDVVSLGVT 432 (503)
T ss_dssp ---GGSSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTCC--------CCCCSSBCEESEEECCST
T ss_pred ---ccCCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCCC--------ccccCCCCeeeeEEecCC
Confidence 00122456889999999999999533 36789999999999999997542 357789999999999 99
Q ss_pred CcEEEEEEEeCCceeEEEEeechHhhhccceEEEEEcCCCCCCCCCCCCC-CCCCCC
Q 009854 469 GGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVDNGKGPNESLLPPP-SDLPKC 524 (524)
Q Consensus 469 ~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p-~~~p~c 524 (524)
++|++|||++||||.|+|||||+||++.|||++|.|.+.+. .++.++| ...+.|
T Consensus 433 g~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~--~~~~~~p~~~~~~C 487 (503)
T 1hfu_A 433 GDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANT--VDANNPPVEWAQLC 487 (503)
T ss_dssp TCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHH--HHHCCCCHHHHHHH
T ss_pred CceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchhh--hhccCCChHHhhhc
Confidence 99999999999999999999999999999999999875443 2344344 345555
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=1.6e-89 Score=729.27 Aligned_cols=457 Identities=25% Similarity=0.434 Sum_probs=346.7
Q ss_pred ccCCCCcc-ccEEEEcCcCCCcEEEEecCCEEEEEEEeCC-CCCceEEecCccccCCCCCCCCCccccccCCC-CCceEE
Q 009854 3 NATRLCST-KPIVTVNGYFPGPTIVAREDDTVLVKVVNHV-KYNVSIHWHGVRQLRTCWADGPAYITQCPIQP-GQNYIY 79 (524)
Q Consensus 3 ~~~~~g~~-~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l-~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~P-G~~~~y 79 (524)
+++++|+. +.+|+|||++|||+||+++||+|+|+|+|+| .++|+|||||+++...+++||+++++||+|+| |++|+|
T Consensus 46 ~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y 125 (559)
T 2q9o_A 46 WMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTY 125 (559)
T ss_dssp EECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEE
T ss_pred eECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEE
Confidence 37899999 9999999999999999999999999999999 68999999999998888899999999999999 999999
Q ss_pred EEEeCCcccceeeccChHHHH-hhceeeEEEcCCCCCCCCCCCCCccE-EEEeceeecccHHHHHHHHHhcCCCCCCCce
Q 009854 80 NFTLAGQRGTLWWHAHILWLR-ATVHGAIVILPKRGVPYPFPKPHKEV-TVILSEWWKSDVEAVINEALKSGLAPNVSDA 157 (524)
Q Consensus 80 ~~~~~~~~Gt~wyH~H~~~~~-~Gl~G~~iV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~ 157 (524)
+|++ .++||||||||...+. +||+|+|||+++... .+++|. +|+++||++++...++.... +..+..++.
T Consensus 126 ~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~~~~~~~~~~--~~~~~~~d~ 197 (559)
T 2q9o_A 126 RWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRAADDLVHFTQ--NNAPPFSDN 197 (559)
T ss_dssp EEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHHHHHT--TSCCCCBSE
T ss_pred EEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCCHHHHhhhhh--cCCCCccce
Confidence 9998 7899999999998877 899999999987653 357887 99999999998877654322 223456789
Q ss_pred EEEcCCCCCCCCCCC-CCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceEEE
Q 009854 158 HTINGHPGPLSSCPS-QGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNV 236 (524)
Q Consensus 158 ~~iNG~~~~~~~~~~-~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~dv 236 (524)
++|||+... .|.. ...+.++|++|++|||||||+|..+.+.|+|+||+|+||+.||.+++|+.++++.|+|||||||
T Consensus 198 ~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dv 275 (559)
T 2q9o_A 198 VLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDV 275 (559)
T ss_dssp EEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEE
T ss_pred eEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCceEeCeEEEccEEEEEE
Confidence 999999863 3532 2457899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCceEEEEee--CCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCC-
Q 009854 237 LLSAAHATGKYLVAASP--FLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPA- 313 (524)
Q Consensus 237 ~v~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~- 313 (524)
+|++++.+|+|+|++.. ...+. ...+....++|+|.++....+.. +..+.. +.. .... ..+.++.....|.
T Consensus 276 lv~~~~~~g~y~i~a~~~~~~~~~--~~~~~~~~ail~y~~~~~~~P~~-~~~~~~-~~~-~~~~-~~l~p~~~~~~p~~ 349 (559)
T 2q9o_A 276 VIDASRAPDNYWFNVTFGGQAACG--GSLNPHPAAIFHYAGAPGGLPTD-EGTPPV-DHQ-CLDT-LDVRPVVPRSVPVN 349 (559)
T ss_dssp EEECCSCSSEEEEEEECCGGGTTC--CBSSSCCEEEEEETTSCCSCCCC-CCCCCC-CCT-TCCC-SCCCBSSCCBCCCT
T ss_pred EEECCCCCCcEEEEEEeccccccC--CCCCCceeEEEEECCCCCCCCCC-CCCcCC-Ccc-cccc-cccccCCCCCCCCc
Confidence 99999877999999986 32222 22334568999998764321111 111100 100 0000 1122221111111
Q ss_pred CCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecC-cchhhhhhhccccccccCCCCCCCCccccCCCCCCCC
Q 009854 314 RVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMP-TISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPAN 392 (524)
Q Consensus 314 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p-~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~ 392 (524)
......+.++.+..... .+....|+|||++|..+ ..|+|..... |. .+|+
T Consensus 350 ~~~~~~~~~~~~~~~~~--------~~~~~~~~iNg~s~~~~~~~P~L~~~~~---g~--~~~~---------------- 400 (559)
T 2q9o_A 350 SFVKRPDNTLPVALDLT--------GTPLFVWKVNGSDINVDWGKPIIDYILT---GN--TSYP---------------- 400 (559)
T ss_dssp TCCCCGGGEEEEEEECS--------SSSSCEEEETTBCCCCCTTSCHHHHHHH---TC--CCCC----------------
T ss_pred ccccceeEEEEEEeecC--------CCceEEEEECCEecccCCCCCcHhHhhc---CC--ccCC----------------
Confidence 01112234444433211 12345799999999764 4555544321 11 1111
Q ss_pred cccCCCceEEEccC-CCEEEEEEEcCCC-CCCCCCCeeecCcceEEEeecC---------CCCCCCCCCCCCCCCCCCcC
Q 009854 393 FQTNNGTRIYRLPY-NSTVQLVLQDTGM-IAPENHPLHLHGFNFFEVGRGL---------GNFNSKKDPKKFNLVDPVER 461 (524)
Q Consensus 393 ~~~~~~~~~~~~~~-g~~v~~~i~n~~~-~~~~~HP~HlHG~~F~Vl~~g~---------g~~~~~~~~~~~~~~~p~~r 461 (524)
.+..++.++. +++++|+++|... ...+.||||||||+|+||+++. |.|++..+...+++.+|.||
T Consensus 401 ----~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~R 476 (559)
T 2q9o_A 401 ----VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRR 476 (559)
T ss_dssp ----GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEE
T ss_pred ----CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCcc
Confidence 1234566654 5677888888431 0157899999999999999987 66664323356788999999
Q ss_pred ceeEecCCcEEEEEEEeCCceeEEEEeechHhhhccceEEEEEcCCC
Q 009854 462 NTIGVPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVDNGK 508 (524)
Q Consensus 462 DTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 508 (524)
|||.|++++|++|||++||||.|||||||++|++.|||++|.|...+
T Consensus 477 DTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~ 523 (559)
T 2q9o_A 477 DTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPAD 523 (559)
T ss_dssp SEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHH
T ss_pred ceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcch
Confidence 99999999999999999999999999999999999999999987544
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=3.6e-82 Score=656.09 Aligned_cols=391 Identities=22% Similarity=0.340 Sum_probs=307.7
Q ss_pred ccCCCCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEE
Q 009854 3 NATRLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFT 82 (524)
Q Consensus 3 ~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~ 82 (524)
.++++|+++.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++.+ ++||++ +.|+||++|+|+|+
T Consensus 27 ~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~----~~I~PG~~~~Y~f~ 100 (439)
T 2xu9_A 27 PLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF----LEIPPGESWTYEFT 100 (439)
T ss_dssp EEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT----CCBCTTCEEEEEEE
T ss_pred EEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc----ccCCCCCeEEEEEe
Confidence 456789999999999999999999999999999999999999999999999876 599986 45999999999999
Q ss_pred eC-CcccceeeccChHH----HH-hhceeeEEEcCCCCCCCCCCCCCccEEEEeceeecccHHHH--HHHHHhcCCCCCC
Q 009854 83 LA-GQRGTLWWHAHILW----LR-ATVHGAIVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAV--INEALKSGLAPNV 154 (524)
Q Consensus 83 ~~-~~~Gt~wyH~H~~~----~~-~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~--~~~~~~~g~~~~~ 154 (524)
++ +++||||||||.++ +. +||+|+|||+++.+.. +....++|++|+++||+++..... .......| ..
T Consensus 101 ~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~~~~~~~~~~~~g---~~ 176 (439)
T 2xu9_A 101 VPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGRPAPHTPMDWMNG---KE 176 (439)
T ss_dssp CCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTEECCCCHHHHHHC---CC
T ss_pred cCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCCcCCCCccccccC---CC
Confidence 83 48999999999853 44 8999999999876421 111357899999999988753100 00001112 24
Q ss_pred CceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCccc-ceeEecEEEeCCCce
Q 009854 155 SDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYV-KPFKTETVLIAPGQT 233 (524)
Q Consensus 155 ~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~P~~~d~v~l~pgeR 233 (524)
++.++|||+.+ |.++|++| +|||||||+|+.+.+.|+|+||+|+||+.||.++ +|+.++++.|+||||
T Consensus 177 ~~~~~iNG~~~----------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR 245 (439)
T 2xu9_A 177 GDLVLVNGALR----------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGER 245 (439)
T ss_dssp CSEEEETTEES----------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCE
T ss_pred CCEEEECCccC----------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceEEECCcee
Confidence 58999999986 78999999 9999999999999999999999999999999997 899999999999999
Q ss_pred EEEEEEeCCCCCceEEEEeeCCCCCcc-------------ccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCcccccccc
Q 009854 234 TNVLLSAAHATGKYLVAASPFLDTPAI-------------LVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFT 300 (524)
Q Consensus 234 ~dv~v~~~~~~g~~~~~~~~~~~~~~~-------------~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~ 300 (524)
|||+|++++ +|+|+|++..+..+... ........++++|.++.... .+|...
T Consensus 246 ~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~p~~l------------ 310 (439)
T 2xu9_A 246 AEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPL--PLPKAL------------ 310 (439)
T ss_dssp EEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCC--CCCSCC------------
T ss_pred EEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCccc--cCcccC------------
Confidence 999999998 79999999865433210 00123467889997654211 111100
Q ss_pred ccccccCCCCCCCCCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCC
Q 009854 301 ASLRSLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPP 380 (524)
Q Consensus 301 ~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p 380 (524)
..+.++ ..+ ..++++.+.+... + ..|.+||++|..+..
T Consensus 311 ~~~~~l-------~~~-~~~r~~~l~~~~~---------g--~~~~iNg~~~~~~~~----------------------- 348 (439)
T 2xu9_A 311 SPFPTL-------PAP-VVTRRLVLTEDMM---------A--ARFFINGQVFDHRRV----------------------- 348 (439)
T ss_dssp CCCCCC-------CCC-SEEEEEEEEEEGG---------G--TEEEETTBCCCTTCC-----------------------
T ss_pred CCcccC-------CCC-CcceEEEEEeecc---------C--ceEeECCEECCCCCC-----------------------
Confidence 001111 011 1246666655431 1 148899988843211
Q ss_pred ccccCCCCCCCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCc
Q 009854 381 VTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVE 460 (524)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~ 460 (524)
...++.|++++|+|+|.+ .+.|||||||++||||+++.+.+ .+|.|
T Consensus 349 --------------------~~~~~~g~~~~~~~~N~~---~~~HP~HLHG~~F~Vl~~~g~~~-----------~~p~~ 394 (439)
T 2xu9_A 349 --------------------DLKGQAQTVEVWEVENQG---DMDHPFHLHVHPFQVLSVGGRPF-----------PYRAW 394 (439)
T ss_dssp --------------------CEEECTTCEEEEEEEECS---SSCEEEEESSCCBEEEEETTEEC-----------SSCCC
T ss_pred --------------------ceecCCCCEEEEEEEcCC---CCCCCceeCCCcEEEEeeCCCCC-----------CCCCC
Confidence 246789999999999964 67899999999999999975432 36899
Q ss_pred CceeEecCCcEEEEEEEeCCceeEEEEeechHhhhccceEEEEEc
Q 009854 461 RNTIGVPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 461 rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
||||.|+|+++++|||++||||.|+|||||++|||.|||++|+|.
T Consensus 395 rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 395 KDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp BSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred eEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 999999999999999999999999999999999999999999883
No 10
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=6.8e-82 Score=665.14 Aligned_cols=410 Identities=20% Similarity=0.265 Sum_probs=312.7
Q ss_pred ccCCCCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEE
Q 009854 3 NATRLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFT 82 (524)
Q Consensus 3 ~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~ 82 (524)
+++|+|+.+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++... +||++ ||+|.||++|+|+|+
T Consensus 49 ~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~~---~~~i~PG~~~~Y~f~ 123 (534)
T 3abg_A 49 QVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAA--FDGWA---EDITEPGSFKDYYYP 123 (534)
T ss_dssp CCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCTT--TTTCS---SSCBSSCSCCCEEEC
T ss_pred EecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCCC--CCCCC---CCCCCCCCeEEEEEe
Confidence 5789999999999999999999999999999999999999999999999998765 99974 799999999999999
Q ss_pred eCCcccceeeccChHHH----H-hhceeeEEEcCCCCCCCCCCC--CCccEEEEeceeecccHHHHHHHHHhcC-CCCCC
Q 009854 83 LAGQRGTLWWHAHILWL----R-ATVHGAIVILPKRGVPYPFPK--PHKEVTVILSEWWKSDVEAVINEALKSG-LAPNV 154 (524)
Q Consensus 83 ~~~~~Gt~wyH~H~~~~----~-~Gl~G~~iV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~~~~~~g-~~~~~ 154 (524)
+.+++||||||||.+++ . +||+|+|||+++.+...+++. .++|++|+++||+++....++. ..+ .....
T Consensus 124 ~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~---~~~~~~~~~ 200 (534)
T 3abg_A 124 NRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVT---TNGELNSFW 200 (534)
T ss_dssp CCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCC---CTTCSSCCC
T ss_pred cCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCceec---cCCCCcccc
Confidence 96678999999999753 2 899999999998876555554 3678999999998765433211 111 12345
Q ss_pred CceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcC-------ceeeEEEecCcc-cceeEecEE
Q 009854 155 SDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAG-------HKLTVVEVDAAY-VKPFKTETV 226 (524)
Q Consensus 155 ~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~g-------h~~~via~DG~~-~~P~~~d~v 226 (524)
++.++|||+.+ +.++|++ ++|||||||+|+.+.+.|+|++ |+|+||++||++ .+|+.+++|
T Consensus 201 gd~~lvNG~~~----------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l 269 (534)
T 3abg_A 201 GDVIHVNGQPW----------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLL 269 (534)
T ss_dssp CSEEEETTEES----------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCE
T ss_pred CceeccCCccC----------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceE
Confidence 78999999987 6788988 5899999999999999999987 999999999985 489999999
Q ss_pred EeCCCceEEEEEEeCCCCC-ceEEEEeeCCC-CCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccc
Q 009854 227 LIAPGQTTNVLLSAAHATG-KYLVAASPFLD-TPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLR 304 (524)
Q Consensus 227 ~l~pgeR~dv~v~~~~~~g-~~~~~~~~~~~-~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 304 (524)
.|+|||||||+|++++.+| +|+|++..... +.....+.....++++|..+...........| ..|.
T Consensus 270 ~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P------------~~L~ 337 (534)
T 3abg_A 270 YISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP------------ANLR 337 (534)
T ss_dssp EECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC------------CCCC
T ss_pred EECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc------------cccc
Confidence 9999999999999998667 69998754211 11001111234688998765432110000011 1122
Q ss_pred ccCCCCCCCCCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCcccc
Q 009854 305 SLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYN 384 (524)
Q Consensus 305 ~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~ 384 (524)
.+.. + ..+...++++.+. .. . ..|+|||++|..+..+
T Consensus 338 ~~~~---p-~~~~~~~~~~~~~--~~--------~---~~w~iNG~~f~~~~~p-------------------------- 374 (534)
T 3abg_A 338 DVPF---P-SPTTNTPRQFRFG--RT--------G---PTWTINGVAFADVQNR-------------------------- 374 (534)
T ss_dssp CCSC---C-CCCCCCCEEEECS--CC--------C---STTCCCCBTTBCTTSC--------------------------
T ss_pred cCCC---C-CCccccceEEEEe--cc--------C---ceeEECCcccCCCCCc--------------------------
Confidence 2211 1 1122345544432 11 1 1378999887443211
Q ss_pred CCCCCCCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCcee
Q 009854 385 FTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTI 464 (524)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv 464 (524)
....++.|++++|+|+|.+ ..+.||||||||+|+||+++.|.+.. ...++.+ .|||||
T Consensus 375 ---------------~l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~F~Vl~~~~g~~~~----~~~~~~~-~~rDTV 432 (534)
T 3abg_A 375 ---------------LLANVPVGTVERWELINAG--NGWTHPIHIHLVDFKVISRTSGNNAR----TVMPYES-GLKDVV 432 (534)
T ss_dssp ---------------CCCEECTTCEEEEEEEECS--SSCCCCEEESSCCEEEEEESSCCSSS----CCCSGGG-SCBSEE
T ss_pred ---------------ceeeccCCCEEEEEEEcCC--CCCCcCEEECCeeEEEEEEcCCCCcC----cCCcccc-CCcCeE
Confidence 1135678999999999964 24689999999999999996554321 1234455 899999
Q ss_pred EecCCcEEEEEEE-eCCceeEEEEeechHhhhccceEEEEEcCCC
Q 009854 465 GVPSGGWTAIRFR-ADNPGVWFMHCHLEVHTTWGLKMAFIVDNGK 508 (524)
Q Consensus 465 ~vpp~g~v~irf~-adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 508 (524)
.|+|+++++|||+ +||||.|+|||||++|+|.|||+.|.|...+
T Consensus 433 ~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 433 WLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp CCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 9999999999998 8999999999999999999999999998765
No 11
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=2.5e-82 Score=657.76 Aligned_cols=396 Identities=16% Similarity=0.165 Sum_probs=307.0
Q ss_pred ccCC-CCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEE
Q 009854 3 NATR-LCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNF 81 (524)
Q Consensus 3 ~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~ 81 (524)
.+++ +|..+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++.+. +||++ ||+|+||++|+|+|
T Consensus 29 ~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~~i~PG~~~~Y~f 103 (451)
T 2uxt_A 29 HWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---ARMMSPNADWAPVL 103 (451)
T ss_dssp CGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GGCBCTTCEECCEE
T ss_pred EEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cCcCCCCCeEEEEE
Confidence 3445 799999999999999999999999999999999999999999999999987 99987 89999999999999
Q ss_pred EeCCcccceeeccChH----HHH-hhceeeEEEcCCCCCCCCCCC--CCccEEEEeceeecccHHHHHHHHHhcCCCCCC
Q 009854 82 TLAGQRGTLWWHAHIL----WLR-ATVHGAIVILPKRGVPYPFPK--PHKEVTVILSEWWKSDVEAVINEALKSGLAPNV 154 (524)
Q Consensus 82 ~~~~~~Gt~wyH~H~~----~~~-~Gl~G~~iV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~ 154 (524)
++++++||||||||.+ .|. +||+|+|||+++.+...+++. .++|++|+++||+++....+.. ...+.....
T Consensus 104 ~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~--~~~~~~~~~ 181 (451)
T 2uxt_A 104 PIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY--NEPGSGGFV 181 (451)
T ss_dssp ECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC--CCCSSSCCC
T ss_pred EcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec--ccccCCCCc
Confidence 9965699999999984 344 899999999998654333433 4789999999998875433210 112233456
Q ss_pred CceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEE-cCceeeEEEecCccc-ceeEecEEEeCCCc
Q 009854 155 SDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKI-AGHKLTVVEVDAAYV-KPFKTETVLIAPGQ 232 (524)
Q Consensus 155 ~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l-~gh~~~via~DG~~~-~P~~~d~v~l~pge 232 (524)
++.++|||+.+ |.++|++| +|||||||+|+.+.+.|+| +||+|+||+.||.++ +|+.++++.|+|||
T Consensus 182 ~d~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pge 250 (451)
T 2uxt_A 182 GDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGE 250 (451)
T ss_dssp CSEEEETTEES----------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTC
T ss_pred CCEEEECCccc----------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECcee
Confidence 79999999987 78999999 9999999999999999999 899999999999987 89999999999999
Q ss_pred eEEEEEEeCCCCCceEEEEeeCCCCCcc------ccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 009854 233 TTNVLLSAAHATGKYLVAASPFLDTPAI------LVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSL 306 (524)
Q Consensus 233 R~dv~v~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l 306 (524)
||||+|++++ +|.|+|++.....+... ........++++|......... ...+|. .|.++
T Consensus 251 R~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-~~~~p~------------~L~~~ 316 (451)
T 2uxt_A 251 RREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-TDSLPM------------RLLPT 316 (451)
T ss_dssp EEEEEEECTT-CCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCCS------------CSSSS
T ss_pred EEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc-cccCcc------------ccCCC
Confidence 9999999997 58999998764322100 0112334678888765432111 011111 12222
Q ss_pred CCCCCCCCCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCC
Q 009854 307 NSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFT 386 (524)
Q Consensus 307 ~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~ 386 (524)
... ..+...++++.+. . .|+|||++|..++
T Consensus 317 ~~~----~~~~~~~~~~~l~--~--------------~~~iNg~~f~~~~------------------------------ 346 (451)
T 2uxt_A 317 EIM----AGSPIRSRDISLG--D--------------DPGINGQLWDVNR------------------------------ 346 (451)
T ss_dssp CCC----CCCCSEEEEEEEC--S--------------SSSBTTBCCCTTC------------------------------
T ss_pred CCC----CCCCcceEEEEEe--e--------------EEEECCEeCCCCC------------------------------
Confidence 111 1122233444332 1 2789988874321
Q ss_pred CCCCCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEe
Q 009854 387 GTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGV 466 (524)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 466 (524)
..+.++.|++++|+|+|. +.||||||||+|+||+++.. .+++.+|.|||||.|
T Consensus 347 -------------~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~G~---------~~~~~~p~~rDTv~v 399 (451)
T 2uxt_A 347 -------------IDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVNGA---------MPFPEDRGWKDTVWV 399 (451)
T ss_dssp -------------CCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEETTB---------CCCGGGSSCBSEEEE
T ss_pred -------------CcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeCCc---------CCCcccCCCccEEEE
Confidence 124678999999999994 58999999999999998522 245678999999999
Q ss_pred cCCcEEEEEEEeCCcee----EEEEeechHhhhccceEEEEEcCCCC
Q 009854 467 PSGGWTAIRFRADNPGV----WFMHCHLEVHTTWGLKMAFIVDNGKG 509 (524)
Q Consensus 467 pp~g~v~irf~adnpG~----w~~HCHil~H~d~GM~~~~~V~~~~~ 509 (524)
+++++|+|++||||. |||||||++|||.|||++|+|.+.+.
T Consensus 400 --g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~~ 444 (451)
T 2uxt_A 400 --DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVPR 444 (451)
T ss_dssp --EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSCC
T ss_pred --CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCcc
Confidence 999999999999988 99999999999999999999986543
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=4.3e-81 Score=659.28 Aligned_cols=418 Identities=19% Similarity=0.254 Sum_probs=311.1
Q ss_pred ccCCCCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCC----------------------CceEEecCccccCCCCC
Q 009854 3 NATRLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKY----------------------NVSIHWHGVRQLRTCWA 60 (524)
Q Consensus 3 ~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~----------------------~~~iH~HG~~~~~~~~~ 60 (524)
++++++..+.+|+|||++|||+||+++||+|+|+|+|+|++ +|+|||||+++.+. +
T Consensus 38 ~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~~~--~ 115 (513)
T 2wsd_A 38 QLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDD--S 115 (513)
T ss_dssp CSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCCGG--G
T ss_pred eeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCCCc--c
Confidence 56788899999999999999999999999999999999975 99999999999865 9
Q ss_pred CCCCc--cccccCCCCCce---EEEEEeCCcccceeeccChHH----HH-hhceeeEEEcCCCCCCCCCCCCCccEEEEe
Q 009854 61 DGPAY--ITQCPIQPGQNY---IYNFTLAGQRGTLWWHAHILW----LR-ATVHGAIVILPKRGVPYPFPKPHKEVTVIL 130 (524)
Q Consensus 61 DG~~~--~~q~~i~PG~~~---~y~~~~~~~~Gt~wyH~H~~~----~~-~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~ 130 (524)
||+++ ++||+|.||++| +|+|++.+++||||||||.++ |. +||+|+|||+++.+...+++.+++|++|++
T Consensus 116 DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~d~d~~l~l 195 (513)
T 2wsd_A 116 DGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLI 195 (513)
T ss_dssp SCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGGCCCCGGGEEEEEE
T ss_pred CCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccccCCCCCCcEEEEE
Confidence 99985 789999999555 999998678999999999975 33 899999999998766555667789999999
Q ss_pred ceeecccHHHHHHHHH----------hcCCCCCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEE
Q 009854 131 SEWWKSDVEAVINEAL----------KSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELF 200 (524)
Q Consensus 131 ~d~~~~~~~~~~~~~~----------~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~ 200 (524)
+||+++....+..... ........+++++|||+.+ +.+++++| +|||||||+|+.+.+.
T Consensus 196 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~~-~~RlRliNa~~~~~~~ 264 (513)
T 2wsd_A 196 TDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEPR-KYRFRVINASNTRTYN 264 (513)
T ss_dssp EEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCSS-EEEEEEEECCSSCCEE
T ss_pred EeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecCC-EEEEEEEccCCcceEE
Confidence 9998765433211000 0011234679999999987 67999885 8999999999999999
Q ss_pred EEEcCc-eeeEEEecCccc-ceeEecEEEeCCCceEEEEEEeCCCCCceE-EEEeeCCCCCccccCCCCeEEEEEEcCCC
Q 009854 201 FKIAGH-KLTVVEVDAAYV-KPFKTETVLIAPGQTTNVLLSAAHATGKYL-VAASPFLDTPAILVDNKTATATVHYSGTL 277 (524)
Q Consensus 201 ~~l~gh-~~~via~DG~~~-~P~~~d~v~l~pgeR~dv~v~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~ail~y~~~~ 277 (524)
|+|+|| +|+|||+||.++ +|+.++++.|+|||||||+|++++.+|++. +.... .+. ..+......++++|..+.
T Consensus 265 ~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~--~~~-~~~~~~~~~~il~~~~~~ 341 (513)
T 2wsd_A 265 LSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSA--GCG-GDVNPETDANIMQFRVTK 341 (513)
T ss_dssp EEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECC--CSS-SSCCTTTTTEEEEEECCS
T ss_pred EEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecc--ccc-ccCCCCCCcceEEEEecc
Confidence 999999 999999999998 899999999999999999999998778743 33321 121 112222446789997653
Q ss_pred CCCCCCCCCCCCCCCccccccccccccccCCCCCCCCCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcc
Q 009854 278 GSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTI 357 (524)
Q Consensus 278 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~ 357 (524)
....+....+|. .|..+. ..+. .+...++++.+...+.. .+ ...|.+||++|..+.
T Consensus 342 ~~~~~~~~~~p~------------~l~~~~--~~~~-~~~~~~~~~~l~~~~~~-------~g-~~~~~iNg~~~~~~~- 397 (513)
T 2wsd_A 342 PLAQKDESRKPK------------YLASYP--SVQH-ERIQNIRTLKLAGTQDE-------YG-RPVLLLNNKRWHDPV- 397 (513)
T ss_dssp CCSSCCCCCCCS------------BCSCCG--GGCC-CCEEEEEEEEEEEEECT-------TS-CEEEEETTBCTTSCC-
T ss_pred CcccCccCCCCc------------cccCCC--Cccc-CCCcceEEEEEEeecCC-------CC-CceEeECCccCCCcc-
Confidence 211111111111 011100 0000 11123455555443322 12 335779998773221
Q ss_pred hhhhhhhccccccccCCCCCCCCccccCCCCCCCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEE
Q 009854 358 SLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEV 437 (524)
Q Consensus 358 ~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl 437 (524)
.+.++.|++++|+|+|.+ .+.|||||||++||||
T Consensus 398 -------------------------------------------~~~~~~g~~~~w~l~N~~---~~~HP~HlHG~~F~Vl 431 (513)
T 2wsd_A 398 -------------------------------------------TETPKVGTTEIWSIINPT---RGTHPIHLHLVSFRVL 431 (513)
T ss_dssp -------------------------------------------CBCCBTTCEEEEEEEECS---SSCEEEEESSCCEEEE
T ss_pred -------------------------------------------cEecCCCCEEEEEEEcCC---CCCcCEeEeCceEEEE
Confidence 124568999999999964 5789999999999999
Q ss_pred eecCC---CCCCCC------CCCCCCCCCCCcCceeEecCCcEEEEEEEe-CCceeEEEEeechHhhhccceEEEEEcC
Q 009854 438 GRGLG---NFNSKK------DPKKFNLVDPVERNTIGVPSGGWTAIRFRA-DNPGVWFMHCHLEVHTTWGLKMAFIVDN 506 (524)
Q Consensus 438 ~~g~g---~~~~~~------~~~~~~~~~p~~rDTv~vpp~g~v~irf~a-dnpG~w~~HCHil~H~d~GM~~~~~V~~ 506 (524)
+++.. .|++.. .+......++.|||||.|+|+++++|+|++ ||||.|+|||||++|+|.|||+.|+|.+
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 432 DRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp EEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred EecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeC
Confidence 98742 121110 001112234579999999999999999998 8999999999999999999999999975
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=6e-79 Score=631.82 Aligned_cols=396 Identities=21% Similarity=0.326 Sum_probs=294.3
Q ss_pred CCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCc
Q 009854 7 LCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQ 86 (524)
Q Consensus 7 ~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~ 86 (524)
+|+.+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++++. +||++ ||+|.||++|+|+|+++++
T Consensus 66 ~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~p---q~~I~PG~s~~Y~f~~~~~ 140 (481)
T 3zx1_A 66 KGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPD--QDGSP---HDPILAGEERIYRFEIPQD 140 (481)
T ss_dssp TTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCGG--GSCCT---TSCBCTTCEEEEEEECCTT
T ss_pred CCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCCc--cCCCc---cCcCCCCCeEEEEEeCCCC
Confidence 689999999999999999999999999999999999999999999998654 99986 8999999999999999543
Q ss_pred -ccceeeccChH----HHH-hhceeeEEEcCCCCCCCCCCCCCccEEEEeceeecccHHHHHH---HHHhcCCCCCCCce
Q 009854 87 -RGTLWWHAHIL----WLR-ATVHGAIVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVIN---EALKSGLAPNVSDA 157 (524)
Q Consensus 87 -~Gt~wyH~H~~----~~~-~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~---~~~~~g~~~~~~~~ 157 (524)
+||||||||.+ .|. +||+|+|||+++.+..+++ +.++ |+++||+++....+.. .....| ..++.
T Consensus 141 ~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~~~~~~~~~~~~g---~~gd~ 213 (481)
T 3zx1_A 141 SAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQIPNNNLNDWLNG---REGEF 213 (481)
T ss_dssp CCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSCCCCCCHHHHHHC---CCCSE
T ss_pred CCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCccccccchhhccC---CcCCE
Confidence 79999999974 344 8999999999987654433 3444 9999998875432210 001112 35689
Q ss_pred EEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCccc-ceeEecEEEeCCCceEEE
Q 009854 158 HTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYV-KPFKTETVLIAPGQTTNV 236 (524)
Q Consensus 158 ~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~P~~~d~v~l~pgeR~dv 236 (524)
++|||+.+ |.++|++|+ ||||||+|+.+.+.|+|+||+|+||++||+++ +|+.++++.|+|||||||
T Consensus 214 ~lvNG~~~----------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dv 281 (481)
T 3zx1_A 214 VLINGQFK----------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEV 281 (481)
T ss_dssp EEETTEES----------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEE
T ss_pred EEECCccC----------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEE
Confidence 99999987 789999998 99999999999999999999999999998876 899999999999999999
Q ss_pred EEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCCCCC
Q 009854 237 LLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPARVP 316 (524)
Q Consensus 237 ~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p 316 (524)
+|++++ ++.|.|.+..................++++...... ..+| . .|..+... ..+
T Consensus 282 lv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~lP---~------------~l~~~~~~----~~~ 339 (481)
T 3zx1_A 282 LIDAPK-DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN--VELP---K------------NLKIFKPS----EEP 339 (481)
T ss_dssp EEECSS-CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC--CCCC---S------------CSCCCCCC----CCC
T ss_pred EEEcCC-CcEEEEEEecccccCccccCCCCceeEEEEecCCCC--ccCC---c------------cccCCCCC----CCC
Confidence 999997 588999876543211000011223344444322211 1111 1 11111100 111
Q ss_pred CCcceEEEEEeccCccCCcccc-CCce-------EEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCCCC
Q 009854 317 LKIDHSLFFTIGLGINPCATCV-NGSR-------VVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGT 388 (524)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~ 388 (524)
. .++++.+...... ...+. .+.. ..|+|||+.|...
T Consensus 340 ~-~~r~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~--------------------------------- 383 (481)
T 3zx1_A 340 K-EFKEIIMSEDHMQ--MHGMMGKSEGELKIALASMFLINRKSYDLK--------------------------------- 383 (481)
T ss_dssp C-EEEEEEEEECCST--TTTGGGCCHHHHHHHHHTTEEETTBCCCTT---------------------------------
T ss_pred C-cEEEEEEeccchh--cccccccccccccccccceeEECCEeCCCC---------------------------------
Confidence 1 3444444332210 00000 0000 1277888766221
Q ss_pred CCCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeec-CCCCCCCCCCCCCCCCCCCcCceeEec
Q 009854 389 QPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRG-LGNFNSKKDPKKFNLVDPVERNTIGVP 467 (524)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g-~g~~~~~~~~~~~~~~~p~~rDTv~vp 467 (524)
...+.++.|++|+|+|.|.+ .+.|||||||+.|+|+++. .|. .....++.|||||.|+
T Consensus 384 ----------~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~vl~~~~~g~--------~~~~~~~~~kDTv~v~ 442 (481)
T 3zx1_A 384 ----------RIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFELISSKLNGK--------VQKAEFRALRDTINVR 442 (481)
T ss_dssp ----------CCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEEEEEEETTE--------EEECSSCCEESEEEEC
T ss_pred ----------CceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEEEEecccCC--------CCCcccCcccceEEEC
Confidence 12357789999999999954 7899999999999999983 121 1123457899999999
Q ss_pred CCcEEEEEEEeCCceeEEEEeechHhhhccceEEEEEc
Q 009854 468 SGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 468 p~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
|+++++|+|+|||||.|+|||||++|+|.|||+.|+|+
T Consensus 443 Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 443 PNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp TTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 99999999999999999999999999999999999996
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=1e-78 Score=660.13 Aligned_cols=449 Identities=17% Similarity=0.206 Sum_probs=300.6
Q ss_pred cccCCCCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCC-------------------------------------
Q 009854 2 KNATRLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYN------------------------------------- 44 (524)
Q Consensus 2 ~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~------------------------------------- 44 (524)
+++.+++..+.+|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 44 ~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (612)
T 3gyr_A 44 VRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAA 123 (612)
T ss_dssp ECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHT
T ss_pred EeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccccccccccccccccc
Confidence 4678899999999999999999999999999999999999654
Q ss_pred ----ceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccChHH----HH-hhceeeEEEcCCCCC
Q 009854 45 ----VSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILW----LR-ATVHGAIVILPKRGV 115 (524)
Q Consensus 45 ----~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~~----~~-~Gl~G~~iV~~~~~~ 115 (524)
|+|||||+++.+. +||++ ||+|.||++|+|+|++++++||||||+|.++ |. +||+|+|||+++.+.
T Consensus 124 ~~~~ttiHwHGl~~~~~--~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~~ 198 (612)
T 3gyr_A 124 LPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEED 198 (612)
T ss_dssp CCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHHH
T ss_pred CCCCceEEcCCCccCCc--ccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCcccc
Confidence 6789999998754 99875 8999999999999999777899999999754 43 899999999998877
Q ss_pred CCCCCCCCccEEEEeceeecccHHHHHHHHH----------------hcCCCCCCCceEEEcCCCCCCCCCCCCCceeEE
Q 009854 116 PYPFPKPHKEVTVILSEWWKSDVEAVINEAL----------------KSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLP 179 (524)
Q Consensus 116 ~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~----------------~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~ 179 (524)
.++++.+++|++|+|+||+++.......... .....+..++.++|||+.+ |.+.
T Consensus 199 ~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~----------p~~~ 268 (612)
T 3gyr_A 199 ALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW----------PYAD 268 (612)
T ss_dssp TTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES----------CEEE
T ss_pred ccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc----------ceEe
Confidence 7777788999999999997754322110000 0001234578999999987 6788
Q ss_pred EecCCEEEEEEEecCCCCeEEEEEcCc-------eeeEEEecCccc-ceeEe------cEEEeCCCceEEEEEEeCCCCC
Q 009854 180 VESGKTYMLRLINAALNEELFFKIAGH-------KLTVVEVDAAYV-KPFKT------ETVLIAPGQTTNVLLSAAHATG 245 (524)
Q Consensus 180 v~~G~~~rlRliN~~~~~~~~~~l~gh-------~~~via~DG~~~-~P~~~------d~v~l~pgeR~dv~v~~~~~~g 245 (524)
++. ++|||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.+ ++|.|+|||||||+|++++.+|
T Consensus 269 v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~~~ 347 (612)
T 3gyr_A 269 VDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGG 347 (612)
T ss_dssp EES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTT
T ss_pred ccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECCCCCc
Confidence 876 57999999999999999999988 599999999998 57665 4899999999999999998766
Q ss_pred ceEEEEeeCCCCCcc---ccCCCCeEEEEEEcCCCCCCC--CCCCCCCCCCCccccccccccccccCCCCCCCCCCCCcc
Q 009854 246 KYLVAASPFLDTPAI---LVDNKTATATVHYSGTLGSTA--TTLTVPPPRNATPVAANFTASLRSLNSKKYPARVPLKID 320 (524)
Q Consensus 246 ~~~~~~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~ 320 (524)
.++............ .........+++|........ ..++........ .. ....+. ..
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-----------~~-----~~~~~~-~~ 410 (612)
T 3gyr_A 348 RRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFR-----------RM-----SHDIPH-GH 410 (612)
T ss_dssp CEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCC-----------CC-----CTTSCC-EE
T ss_pred eEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCccccccccccccc-----------cc-----cccccc-cc
Confidence 655443322111100 111223456666654333211 111111000000 00 000000 01
Q ss_pred eEEEEEeccCccCCccccCCceEEEEecCee----eecCcchhhhhhhccccccccCCCCCCCCccccCCCCCCCCcccC
Q 009854 321 HSLFFTIGLGINPCATCVNGSRVVADINNVT----FVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTN 396 (524)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~----~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~ 396 (524)
+........... .......+...... +..+....+.. ......+..+.. |....
T Consensus 411 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~------n~~~~ 468 (612)
T 3gyr_A 411 RLIVLTPPGTKG-----SGGHPEIWEMAEVEDPADVQVPAEGVIQV-----------TGADGRTKTYRR------TARTF 468 (612)
T ss_dssp EEEEEECTTCTT-----TTTCCEEEEEEECC-----CCSCTTEEEE-----------ECTTSCEEEEEE------EECST
T ss_pred cccccccccccc-----ccccccccccccccccccccccccceeee-----------ccCCCccccccc------cCccC
Confidence 111111000000 00001111111100 00000000000 000000000000 11112
Q ss_pred CCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCC---C------------CCCCCCCCCCCcC
Q 009854 397 NGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSK---K------------DPKKFNLVDPVER 461 (524)
Q Consensus 397 ~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~---~------------~~~~~~~~~p~~r 461 (524)
.....+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+.++.. . .....+..++.||
T Consensus 469 ~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 545 (612)
T 3gyr_A 469 NDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHK 545 (612)
T ss_dssp TSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCB
T ss_pred CCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCC
Confidence 2334567889999999999964 67899999999999999864332210 0 0123456788999
Q ss_pred ceeEecCCcEEEEEEE-eCCceeEEEEeechHhhhccceEEEEEcCCC
Q 009854 462 NTIGVPSGGWTAIRFR-ADNPGVWFMHCHLEVHTTWGLKMAFIVDNGK 508 (524)
Q Consensus 462 DTv~vpp~g~v~irf~-adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 508 (524)
|||.|+++++++|||+ +||||.||||||||+|||.|||+.|+|.+++
T Consensus 546 DTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~ 593 (612)
T 3gyr_A 546 DVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp SEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHH
T ss_pred cEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCc
Confidence 9999999999999998 6999999999999999999999999998754
No 15
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=3.8e-79 Score=632.74 Aligned_cols=385 Identities=19% Similarity=0.291 Sum_probs=296.7
Q ss_pred EEEcCc-CCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceee
Q 009854 14 VTVNGY-FPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWW 92 (524)
Q Consensus 14 ~~~NG~-~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wy 92 (524)
|+|||+ +|||+||+++||+|+|+|+|+|+++|+|||||+++++. +||+++ |+|.||++|+|+|++.+++|||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~~---~~i~PG~~~~Y~f~~~~~~GT~wY 102 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNWH--NDAHPS---FAITPGESYNYSFDVVNRAGTYLY 102 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCHH--HHTCGG---GCBCTTCEEEEEEECCSCSEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCCc--cCCCCC---ccCCCCCEEEEEEEcCCCCCceEe
Confidence 899999 99999999999999999999999999999999998754 999987 999999999999999668999999
Q ss_pred ccC----hHHHH-hhceeeEEEcCCCCCCCCCCCCC-ccEEEEeceeecccHHHHHH----HHHhcCCCCCCCceEEEcC
Q 009854 93 HAH----ILWLR-ATVHGAIVILPKRGVPYPFPKPH-KEVTVILSEWWKSDVEAVIN----EALKSGLAPNVSDAHTING 162 (524)
Q Consensus 93 H~H----~~~~~-~Gl~G~~iV~~~~~~~~~~~~~~-~e~~l~~~d~~~~~~~~~~~----~~~~~g~~~~~~~~~~iNG 162 (524)
||| ...|. +||+|+|||+++.+. .+++ ++ +|++|+++||+++. .++.. ..... +..++.++|||
T Consensus 103 H~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~---~~~~~~~liNG 176 (448)
T 3aw5_A 103 HPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIA---GFLGNAVLVNG 176 (448)
T ss_dssp EECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHH---CCCCSEEEETT
T ss_pred ccCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-Cccccccccccccc---CccccEEEECC
Confidence 999 55565 899999999998765 3333 35 89999999998876 33211 00111 24569999999
Q ss_pred CCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEE--cC---ceeeEEEecCcccc-eeEecEEEeCCCceEEE
Q 009854 163 HPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKI--AG---HKLTVVEVDAAYVK-PFKTETVLIAPGQTTNV 236 (524)
Q Consensus 163 ~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l--~g---h~~~via~DG~~~~-P~~~d~v~l~pgeR~dv 236 (524)
+.+ +.++|++| +|||||||+|+.+.+.|+| +| |+|+||+.||.+++ |+.++++.|+|||||||
T Consensus 177 ~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dv 245 (448)
T 3aw5_A 177 VKD----------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEV 245 (448)
T ss_dssp EET----------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEE
T ss_pred ccc----------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEE
Confidence 987 78999999 9999999999999999999 99 99999999999997 99999999999999999
Q ss_pred EEEeCCCCCceEEEEeeCCCCCcc---------ccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccC
Q 009854 237 LLSAAHATGKYLVAASPFLDTPAI---------LVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLN 307 (524)
Q Consensus 237 ~v~~~~~~g~~~~~~~~~~~~~~~---------~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~ 307 (524)
+|++++ +.|+|++.....+... ........++++|.++..... |. .|..+.
T Consensus 246 lv~~~~--~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~------------~L~~lp 305 (448)
T 3aw5_A 246 VVELGE--GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------VE------------ALSDPP 305 (448)
T ss_dssp EEEECS--EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------CC------------CCSCCC
T ss_pred EEECCC--CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------cc------------ccCCCC
Confidence 999984 7899998865432100 011223567788865432211 10 011111
Q ss_pred CCCCCCCCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCCC
Q 009854 308 SKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTG 387 (524)
Q Consensus 308 ~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~ 387 (524)
.. ..+...++++.+..+. ..|+|||++|..++.
T Consensus 306 ~~----~~~~~~~~~~~l~~~~-------------~~~~iNg~~~~~~~p------------------------------ 338 (448)
T 3aw5_A 306 PE----PPKPTRTRRFALSLSG-------------MQWTINGMFWNASNP------------------------------ 338 (448)
T ss_dssp CC----CCCCSEEEEEEEEEET-------------TEEEETTBCCCTTCT------------------------------
T ss_pred CC----CCCCCceEEEEEeCCC-------------ceeeECCCcCCCCCC------------------------------
Confidence 10 1233345666554321 138999998844211
Q ss_pred CCCCCcccCCCceEEE-ccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCC----CCCCCCcCc
Q 009854 388 TQPANFQTNNGTRIYR-LPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKF----NLVDPVERN 462 (524)
Q Consensus 388 ~~~~~~~~~~~~~~~~-~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~----~~~~p~~rD 462 (524)
.+. ++.|++|+|+|+|.+ ..+.|||||||++||||+++ |.+........+ +..++.|||
T Consensus 339 -------------~~~~~~~g~~v~~~i~N~~--~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rD 402 (448)
T 3aw5_A 339 -------------LFEHVSVEGVELWEIVNDK--ASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKD 402 (448)
T ss_dssp -------------TCCCEEECEEEEEEEEECS--SSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBS
T ss_pred -------------ceeccCCCCeEEEEEEcCC--CCCCcCEEECCceEEEEEec-CCCcccccccccccCCCccccCCcc
Confidence 123 568999999999954 25789999999999999984 433211111112 334567999
Q ss_pred eeEecCCcEEEEE--EE---eCCceeEEEEeechHhhhccceEEEEEc
Q 009854 463 TIGVPSGGWTAIR--FR---ADNPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 463 Tv~vpp~g~v~ir--f~---adnpG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
||.|+|+++++|+ |+ +||| |+|||||++|||.|||++|+|.
T Consensus 403 Tv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 403 TVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp EEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 9999999998665 98 8999 9999999999999999999884
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=1.9e-77 Score=620.07 Aligned_cols=411 Identities=20% Similarity=0.262 Sum_probs=295.1
Q ss_pred cCCCCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEe
Q 009854 4 ATRLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTL 83 (524)
Q Consensus 4 ~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~ 83 (524)
+..+|+.+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++.+. +||++ ||+|.||++++|+|++
T Consensus 29 ~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~~~i~PG~~~~Y~f~~ 103 (488)
T 3od3_A 29 STFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QGIIPPGGKRSVTLNV 103 (488)
T ss_dssp EEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---TCCBCTTCEEEEEEEC
T ss_pred EccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---cCcCcCCCeEEEEEec
Confidence 345899999999999999999999999999999999999999999999999865 99986 8999999999999999
Q ss_pred CCcccceeeccChHH----HH-hhceeeEEEcCCCCCCCCCCC--CCccEEEEeceeecccHHHHHHH-HHhcCCCCCCC
Q 009854 84 AGQRGTLWWHAHILW----LR-ATVHGAIVILPKRGVPYPFPK--PHKEVTVILSEWWKSDVEAVINE-ALKSGLAPNVS 155 (524)
Q Consensus 84 ~~~~Gt~wyH~H~~~----~~-~Gl~G~~iV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~~-~~~~g~~~~~~ 155 (524)
.+++||||||||.++ +. +||+|+|||+++.+...+++. ...|++|+++||+++....+... .......+..+
T Consensus 104 ~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~g 183 (488)
T 3od3_A 104 DQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFG 183 (488)
T ss_dssp CSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCC
T ss_pred CCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceeccccccccccCCCC
Confidence 666899999999753 33 899999999998765444443 24699999999988654321100 00000012456
Q ss_pred ceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEE-cCceeeEEEecCccc-ceeEecEEEeCCCce
Q 009854 156 DAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKI-AGHKLTVVEVDAAYV-KPFKTETVLIAPGQT 233 (524)
Q Consensus 156 ~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l-~gh~~~via~DG~~~-~P~~~d~v~l~pgeR 233 (524)
+.++|||+.+ |.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||.++ +|+.+++|.|+||||
T Consensus 184 d~~lvNG~~~----------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR 252 (488)
T 3od3_A 184 DTLLTNGAIY----------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGER 252 (488)
T ss_dssp SEEEETTBSS----------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCE
T ss_pred CEEEEcCCcC----------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCE
Confidence 8999999987 55665 5689999999999999999999 699999999999987 899999999999999
Q ss_pred EEEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCC
Q 009854 234 TNVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPA 313 (524)
Q Consensus 234 ~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~ 313 (524)
|||+|++++ .+.|.+++..................+++...........+| . .|..+.. .+
T Consensus 253 ~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P---~------------~L~~~~~--~~- 313 (488)
T 3od3_A 253 FEVLVEVND-NKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALP---D------------TLSSLPA--LP- 313 (488)
T ss_dssp EEEEEEECT-TCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCC---S------------CCCCCCC--CC-
T ss_pred EEEEEEeCC-CceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCC---c------------ccccCCC--Cc-
Confidence 999999997 478999876543211000111112233333321110101111 1 0111100 01
Q ss_pred CCCCCcceEEEEEeccC----------------ccC------------Cc---cccCCceE----EEEecCeeeecCcch
Q 009854 314 RVPLKIDHSLFFTIGLG----------------INP------------CA---TCVNGSRV----VADINNVTFVMPTIS 358 (524)
Q Consensus 314 ~~p~~~~~~~~~~~~~~----------------~~~------------~~---~~~~~~~~----~~~in~~~~~~p~~~ 358 (524)
.+....++++.+.+... ... .. ....|..+ .|.|||++|...
T Consensus 314 ~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~~--- 390 (488)
T 3od3_A 314 SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMN--- 390 (488)
T ss_dssp CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCTT---
T ss_pred ccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCeeCCCC---
Confidence 11222456666644210 000 00 00001111 267888777321
Q ss_pred hhhhhhccccccccCCCCCCCCccccCCCCCCCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEe
Q 009854 359 LLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVG 438 (524)
Q Consensus 359 ~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~ 438 (524)
...+.++.|++|+|.|.|.+ ..+.|||||||++|+|++
T Consensus 391 ----------------------------------------~~~~~~~~G~~e~w~l~N~~--~~~~Hp~HlHg~~F~Vl~ 428 (488)
T 3od3_A 391 ----------------------------------------KPMFAAAKGQYERWVISGVG--DMMLHPFHIHGTQFRILS 428 (488)
T ss_dssp ----------------------------------------CCSEECCBSSCEEEEEECTT--CCCCEEEEETTCCBEEEE
T ss_pred ----------------------------------------CCceEcCCCCEEEEEEEeCC--CCCCccEEEcCceEEEec
Confidence 11257789999999999965 256899999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeC----CceeEEEEeechHhhhccceEEEEE
Q 009854 439 RGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRAD----NPGVWFMHCHLEVHTTWGLKMAFIV 504 (524)
Q Consensus 439 ~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad----npG~w~~HCHil~H~d~GM~~~~~V 504 (524)
++... ....++.|||||.|+ |+++.|+|+++ +||.||||||||+|||.|||..|+|
T Consensus 429 ~~g~~---------~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 429 ENGKP---------PAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp BTTBC---------CCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred cCCCc---------cccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 85321 122346799999999 99999999974 5789999999999999999999976
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=4.8e-76 Score=624.52 Aligned_cols=426 Identities=18% Similarity=0.235 Sum_probs=306.2
Q ss_pred cccCCCCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCC-------------------------------------
Q 009854 2 KNATRLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYN------------------------------------- 44 (524)
Q Consensus 2 ~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~------------------------------------- 44 (524)
+++++++..+.+|+|||++|||+|++++||+|+|+|+|+|++.
T Consensus 44 ~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~p~~~g~~~~~~~~~ 123 (612)
T 2g23_A 44 VRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAA 123 (612)
T ss_dssp ECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHT
T ss_pred EEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccccccccccccccccc
Confidence 3567888899999999999999999999999999999999753
Q ss_pred ----ceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccChHH----HH-hhceeeEEEcCCCCC
Q 009854 45 ----VSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILW----LR-ATVHGAIVILPKRGV 115 (524)
Q Consensus 45 ----~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~~----~~-~Gl~G~~iV~~~~~~ 115 (524)
|++||||+++.+. +||++ ||+|.||++++|+|++.+++||||||||.++ +. +||+|+|||+++.+.
T Consensus 124 ~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~ 198 (612)
T 2g23_A 124 LPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEED 198 (612)
T ss_dssp CCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEECHHHH
T ss_pred cCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhccceeEEEEcCcccc
Confidence 8999999999876 99985 8999999999999998668999999999975 43 899999999998766
Q ss_pred CCCCCCCCccEEEEeceeecccHHH-HHH-HH------Hh----cCC----CCCCCceEEEcCCCCCCCCCCCCCceeEE
Q 009854 116 PYPFPKPHKEVTVILSEWWKSDVEA-VIN-EA------LK----SGL----APNVSDAHTINGHPGPLSSCPSQGGFKLP 179 (524)
Q Consensus 116 ~~~~~~~~~e~~l~~~d~~~~~~~~-~~~-~~------~~----~g~----~~~~~~~~~iNG~~~~~~~~~~~~~p~~~ 179 (524)
.++++.+++|++|+++||+++.... .+. .. .. .+. .+..++.++|||+.+ |.++
T Consensus 199 ~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~----------p~~~ 268 (612)
T 2g23_A 199 ALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW----------PYAD 268 (612)
T ss_dssp TTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES----------CEEE
T ss_pred cccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC----------CeEE
Confidence 6667778999999999999864321 000 00 00 011 125679999999987 7899
Q ss_pred EecCCEEEEEEEecCCCCeEEEEEcCc-------eeeEEEecCccc-ceeEec------EEEeCCCceEEEEEEeCCCCC
Q 009854 180 VESGKTYMLRLINAALNEELFFKIAGH-------KLTVVEVDAAYV-KPFKTE------TVLIAPGQTTNVLLSAAHATG 245 (524)
Q Consensus 180 v~~G~~~rlRliN~~~~~~~~~~l~gh-------~~~via~DG~~~-~P~~~d------~v~l~pgeR~dv~v~~~~~~g 245 (524)
|++| +|||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.++ +|.|+|||||||+|++++.+|
T Consensus 269 V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g 347 (612)
T 2g23_A 269 VDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGG 347 (612)
T ss_dssp EESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTT
T ss_pred ecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEECCCCCC
Confidence 9999 9999999999999999999999 899999999999 699999 999999999999999998776
Q ss_pred -ceEEEEeeCCCCCccc---cCCCCeEEEEEEcCCCCC--CCCCCCCCCCCCCccccccccccccccCCCCCCCCCCCCc
Q 009854 246 -KYLVAASPFLDTPAIL---VDNKTATATVHYSGTLGS--TATTLTVPPPRNATPVAANFTASLRSLNSKKYPARVPLKI 319 (524)
Q Consensus 246 -~~~~~~~~~~~~~~~~---~~~~~~~ail~y~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~ 319 (524)
+|.|+........ +. .+......++++...... ....+|.. |.... +..+..++. .
T Consensus 348 ~~~~L~~~~~~~~~-g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~---------------L~~~~-~~l~~~~~~-~ 409 (612)
T 2g23_A 348 RRLRLVDKGPGAPA-GTPDPLGGVRYPEVMEFRVRETCEEDSFALPEV---------------LSGSF-RRMSHDIPH-G 409 (612)
T ss_dssp CEEEEEECCTTSCT-TSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSS---------------CCSSC-CCCCTTSCC-E
T ss_pred CEEEEEeCCccCCC-CccccccCccccceEEEEEccCCCCCCCCCChh---------------hcccc-ccCCccccc-c
Confidence 5888765321110 00 001111245656543221 11112210 11000 000000110 0
Q ss_pred ceEEEEEe--ccCccCC-----------------c-------cccCCceEEEEecCeeeecCcchhhhhhhccccccccC
Q 009854 320 DHSLFFTI--GLGINPC-----------------A-------TCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTD 373 (524)
Q Consensus 320 ~~~~~~~~--~~~~~~~-----------------~-------~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~ 373 (524)
.|.+.+.- ..+.... + ...+|....|.||++.|.
T Consensus 410 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~-------------------- 469 (612)
T 2g23_A 410 HRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFN-------------------- 469 (612)
T ss_dssp EEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTT--------------------
T ss_pred eeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCC--------------------
Confidence 11111100 0000000 0 000122223445544431
Q ss_pred CCCCCCCccccCCCCCCCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCC---CCCCCC-
Q 009854 374 DFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGN---FNSKKD- 449 (524)
Q Consensus 374 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~---~~~~~~- 449 (524)
....+.++.|++|+|+|+|.+ .+.|||||||+.|+|++++... |+....
T Consensus 470 ------------------------~~~~~~v~~G~~v~w~l~N~~---~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g 522 (612)
T 2g23_A 470 ------------------------DGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLALGG 522 (612)
T ss_dssp ------------------------SCCCEEEETTCEEEEEEEECS---SSCEEEEESSCCEEEEEEEEEECTTEETTTTE
T ss_pred ------------------------CCCceEecCCCEEEEEEEeCC---CCCCCeEEcCceEEEecccCcccccccccccC
Confidence 123467889999999999964 6789999999999999985322 111100
Q ss_pred -----------CCCCCCCCCCcCceeEecCCcEEEEEEEeC-CceeEEEEeechHhhhccceEEEEEcCCC
Q 009854 450 -----------PKKFNLVDPVERNTIGVPSGGWTAIRFRAD-NPGVWFMHCHLEVHTTWGLKMAFIVDNGK 508 (524)
Q Consensus 450 -----------~~~~~~~~p~~rDTv~vpp~g~v~irf~ad-npG~w~~HCHil~H~d~GM~~~~~V~~~~ 508 (524)
....+..++.|||||.|+|+++++|+|+|+ |||.|||||||++|||.|||+.|+|.+.+
T Consensus 523 ~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 523 TRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp ESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred cccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 023455667899999999999999999999 99999999999999999999999998643
No 18
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.4e-55 Score=479.85 Aligned_cols=226 Identities=18% Similarity=0.225 Sum_probs=175.1
Q ss_pred CccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCc--------cccccCCCCCceEE
Q 009854 8 CSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAY--------ITQCPIQPGQNYIY 79 (524)
Q Consensus 8 g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~--------~~q~~i~PG~~~~y 79 (524)
|+.+..|+ ++|||+||+++||+|+|+|+|.|++++||||||++++.. +||+++ ++||+|+||++|+|
T Consensus 63 ~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~~~vtq~~I~PG~s~tY 137 (742)
T 2r7e_A 63 AKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREKEDDKVFPGGSHTY 137 (742)
T ss_dssp SSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCSSSSSSSSCCTTCEECC
T ss_pred Cccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCcccccccCcCCCCCeEEE
Confidence 44555554 899999999999999999999999999999999998754 666664 89999999999999
Q ss_pred EEEeCC---------cccceeeccChHHH--H-hhceeeEEEcCCCCCCCCCCCCCccEEEEece------eecccHHHH
Q 009854 80 NFTLAG---------QRGTLWWHAHILWL--R-ATVHGAIVILPKRGVPYPFPKPHKEVTVILSE------WWKSDVEAV 141 (524)
Q Consensus 80 ~~~~~~---------~~Gt~wyH~H~~~~--~-~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d------~~~~~~~~~ 141 (524)
+|++.+ ++||||||||.+.+ . +||+|+|||+++.....+.....+|++|++++ |+.......
T Consensus 138 ~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~~ 217 (742)
T 2r7e_A 138 VWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNSL 217 (742)
T ss_dssp EEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC--
T ss_pred EEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCccccccccccc
Confidence 999843 46999999998763 3 89999999999865432222224788887754 444332111
Q ss_pred HHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCC-eEEEEEcCceeeEEEecCcccce
Q 009854 142 INEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNE-ELFFKIAGHKLTVVEVDAAYVKP 220 (524)
Q Consensus 142 ~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~-~~~~~l~gh~~~via~DG~~~~P 220 (524)
+... .........+.++|||+.+ | ..+.+++++|++|||||+|++... .|.||||||.|+|++
T Consensus 218 ~~~~-~~~~~~~~~~~~~ING~~~----~---~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg-------- 281 (742)
T 2r7e_A 218 MQDR-DAASARAWPKMHTVNGYVN----R---SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRN-------- 281 (742)
T ss_dssp ------CCSCCCCCCCCEETTBCT----B---CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETT--------
T ss_pred cccC-CCccccccCceEEECCccC----C---CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEe--------
Confidence 1111 1111122346789999974 1 346789999999999999999765 799999999999974
Q ss_pred eEecEEEeCCCceEEEEEEeCCCCCceEEEEeeCC
Q 009854 221 FKTETVLIAPGQTTNVLLSAAHATGKYLVAASPFL 255 (524)
Q Consensus 221 ~~~d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~~~ 255 (524)
..+|++.|.||++++|+|++++ ||.|+++||...
T Consensus 282 ~~~Dtv~v~Pg~~~~v~~~~~~-pG~w~~hCH~~~ 315 (742)
T 2r7e_A 282 HRQASLEISPITFLTAQTLLMD-LGQFLLFCHISS 315 (742)
T ss_dssp EECCSCCCCTTCCCEEEECCCS-CSEECCCCCSSS
T ss_pred EecceEEeCCCcEEEEEEEeCC-CeeEEEEeCChh
Confidence 3479999999999999999998 699999999754
No 19
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=6.3e-52 Score=410.06 Aligned_cols=256 Identities=29% Similarity=0.411 Sum_probs=212.3
Q ss_pred CCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCc
Q 009854 7 LCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQ 86 (524)
Q Consensus 7 ~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~ 86 (524)
+|..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+++....++||+++++||+|+||++++|+|++ ++
T Consensus 18 ~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~-~~ 96 (318)
T 3g5w_A 18 GKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKA-EP 96 (318)
T ss_dssp TTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CS
T ss_pred CCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEc-CC
Confidence 57889999999999999999999999999999999999999999999988777999999999999999999999998 78
Q ss_pred ccceeeccChHHHH----hhceeeEEEcCCCCCCCCCCCCCccEEEEeceeecccHHHHHHHHHhcCCCCCCCceEEEcC
Q 009854 87 RGTLWWHAHILWLR----ATVHGAIVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTING 162 (524)
Q Consensus 87 ~Gt~wyH~H~~~~~----~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG 162 (524)
+||||||||...+. +||+|+|||++++..+.+ ...++|++|+++||++...... ...+.....++.++|||
T Consensus 97 ~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~-~~~d~e~~l~l~dw~~~~~~~~----~~~~~~~~~~d~~~ING 171 (318)
T 3g5w_A 97 AGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIE-KTVTKDYILMLSDWVSSWANKP----GEGGIPGDVFDYYTINA 171 (318)
T ss_dssp CEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHH-HTCCEEEEEEEEEECGGGTTCT----TCCCCTTCCCCEEEETT
T ss_pred CEEEEEEccCChhhhhccCCCEEEEEEcCCCccccc-ccccceeEEEEEeecccccccc----ccCCCCCCcCcEEEEcC
Confidence 99999999987543 699999999987643211 1358999999999987543210 11122223568999999
Q ss_pred CCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCccc-ceeEecEEEeCCCceEEEEEEeC
Q 009854 163 HPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYV-KPFKTETVLIAPGQTTNVLLSAA 241 (524)
Q Consensus 163 ~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~P~~~d~v~l~pgeR~dv~v~~~ 241 (524)
+.++. ...+++++|++|||||+|++. ..|+||||||.|+||+.||.++ +|..+|++.|+||||+||+|+++
T Consensus 172 ~~~~~-------~~~l~v~~G~~vrlrliN~~~-~~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~ 243 (318)
T 3g5w_A 172 KSFPE-------TQPIRVKKGDVIRLRLIGAGD-HVHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMD 243 (318)
T ss_dssp BCBTS-------SCCEEECTTCEEEEEEEECSS-SCEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC
T ss_pred cCCCC-------CccEEeCCCCEEEEEEEeCCC-ceEEEEECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECC
Confidence 98632 245899999999999999995 5899999999999999999988 79999999999999999999999
Q ss_pred CCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCC
Q 009854 242 HATGKYLVAASPFLDTPAILVDNKTATATVHYSGTL 277 (524)
Q Consensus 242 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~ 277 (524)
+ ||.|+++||......++........++|+|.+..
T Consensus 244 ~-pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 244 N-PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp S-CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred C-CeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 7 6999999996432221111123457899998754
No 20
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=9.5e-51 Score=459.74 Aligned_cols=235 Identities=18% Similarity=0.238 Sum_probs=186.2
Q ss_pred CCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccC----CCCCCCCCc--cccccCCCCCceEEEEEeCCc-------
Q 009854 20 FPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLR----TCWADGPAY--ITQCPIQPGQNYIYNFTLAGQ------- 86 (524)
Q Consensus 20 ~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~----~~~~DG~~~--~~q~~i~PG~~~~y~~~~~~~------- 86 (524)
+|||+||+++||+|+|+|+|.|+++++|||||++++. .+|+||+++ ++||+|+||++|+|+|++.++
T Consensus 92 ~PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d 171 (1065)
T 2j5w_A 92 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGD 171 (1065)
T ss_dssp TSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTS
T ss_pred CcCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCC
Confidence 9999999999999999999999999999999999874 466788888 899999999999999999554
Q ss_pred --ccceeeccChHHHH---hhceeeEEEcCCCCCCCCCC-CCCccEEEEece------eecccHHHHHHHHHhcCCC---
Q 009854 87 --RGTLWWHAHILWLR---ATVHGAIVILPKRGVPYPFP-KPHKEVTVILSE------WWKSDVEAVINEALKSGLA--- 151 (524)
Q Consensus 87 --~Gt~wyH~H~~~~~---~Gl~G~~iV~~~~~~~~~~~-~~~~e~~l~~~d------~~~~~~~~~~~~~~~~g~~--- 151 (524)
+||||||||.+.+. +||+|+|||++++....+.+ .+|+|++|+++| |+..+....+. ...+..
T Consensus 172 ~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~--~~p~~~~~~ 249 (1065)
T 2j5w_A 172 GNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYC--SEPEKVDKD 249 (1065)
T ss_dssp CSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHC--SCGGGCCTT
T ss_pred CCceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhh--cCccccccc
Confidence 59999999998764 89999999999876443332 358899999994 44432211110 000000
Q ss_pred ----CCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCC-CeEEEEEcCceeeEEEecCcccceeEecEE
Q 009854 152 ----PNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALN-EELFFKIAGHKLTVVEVDAAYVKPFKTETV 226 (524)
Q Consensus 152 ----~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~P~~~d~v 226 (524)
...+..++|||+.+. ..+.+++++|++|||||+|++.. ..|.|||+||+|+ ++|+.+|++
T Consensus 250 ~~~~~~~~~~~~iNG~~~~-------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv 314 (1065)
T 2j5w_A 250 NEDFQQSNRMYSVNGYTFG-------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTI 314 (1065)
T ss_dssp CHHHHHHTEEEEETTEETT-------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEE
T ss_pred cccccccCcEEEECCccCC-------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEE
Confidence 001357899999741 24689999999999999999975 6999999999999 357899999
Q ss_pred EeCCCceEEEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCC
Q 009854 227 LIAPGQTTNVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLG 278 (524)
Q Consensus 227 ~l~pgeR~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 278 (524)
.|+||||+||+|++++ ||.|+|+|+...... ....+.++|.+...
T Consensus 315 ~I~pGer~dVlv~~~~-pG~y~i~~h~~~h~~------~Gm~~~~~V~~~~~ 359 (1065)
T 2j5w_A 315 NLFPATLFDAYMVAQN-PGEWMLSCQNLNHLK------AGLQAFFQVQECNK 359 (1065)
T ss_dssp EECBTCEEEEEEECCS-CEEEEEEECSHHHHH------TTCEEEEEEECSCC
T ss_pred EECCCcEEEEEEEeCC-CeeEEEEecCcchhh------CCCEEEEEEecCCC
Confidence 9999999999999998 799999999643211 24567888876443
No 21
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=2.2e-50 Score=403.52 Aligned_cols=256 Identities=28% Similarity=0.480 Sum_probs=211.1
Q ss_pred CCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCc
Q 009854 7 LCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQ 86 (524)
Q Consensus 7 ~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~ 86 (524)
+|.++.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++...+|+||+++++||+|+||++|+|+|++ .+
T Consensus 19 ~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~-~~ 97 (339)
T 2zwn_A 19 PGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKA-DR 97 (339)
T ss_dssp TTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CS
T ss_pred CCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEEC-CC
Confidence 59999999999999999999999999999999999999999999999999888999999999999999999999998 68
Q ss_pred ccceeeccChHH--H-H-hhceeeEEEcCCCCCCCCCCCCCccEEEEeceeecccHHHHHHHHHhcCCCCCCCceEEEcC
Q 009854 87 RGTLWWHAHILW--L-R-ATVHGAIVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTING 162 (524)
Q Consensus 87 ~Gt~wyH~H~~~--~-~-~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG 162 (524)
+||||||||... + . +||+|++||+++.....+ ...++|++++++||+....... ...+.....++.++|||
T Consensus 98 ~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~~----~~~g~~~~~~~~~~ING 172 (339)
T 2zwn_A 98 IGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADKY----GEGGTPMNVADYFSVNA 172 (339)
T ss_dssp CEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTCT----TCCCSTTSCCCEEEETT
T ss_pred CEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheeccccccc----CCCCCCccccceEEEcc
Confidence 999999999865 3 2 799999999987543211 2347899999999976321100 00111112468899999
Q ss_pred CCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccc-eeEecEEEeCCCceEEEEEEeC
Q 009854 163 HPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVK-PFKTETVLIAPGQTTNVLLSAA 241 (524)
Q Consensus 163 ~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~-P~~~d~v~l~pgeR~dv~v~~~ 241 (524)
+.++ ....+++++|++|||||+|++ ...|+||||||.|+||+.||.+++ |..+|++.|+||||+||+|+++
T Consensus 173 ~~~~-------~~~~~~v~~G~~vrlrliN~~-~~~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~ 244 (339)
T 2zwn_A 173 KSFP-------LTQPLRVKKGDVVKIRFFGAG-GGIHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEAD 244 (339)
T ss_dssp BCTT-------SSCCEEECTTCEEEEEEEECS-SSCEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC
T ss_pred ccCC-------CcccEEECCCCEEEEEEEeCC-CceEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeC
Confidence 9863 224589999999999999999 569999999999999999999985 8999999999999999999999
Q ss_pred CCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCC
Q 009854 242 HATGKYLVAASPFLDTPAILVDNKTATATVHYSGTL 277 (524)
Q Consensus 242 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~ 277 (524)
+ ||.|+++|+....+...........++++|.+..
T Consensus 245 ~-pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 245 N-PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp S-CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred C-CeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 8 6999999996542110111123457999998754
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=4.5e-49 Score=410.76 Aligned_cols=372 Identities=19% Similarity=0.164 Sum_probs=249.8
Q ss_pred ccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccce
Q 009854 11 KPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTL 90 (524)
Q Consensus 11 ~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~ 90 (524)
+.+++|||++ ||+|+|++||+|+|+|+|.+...+++||||... .++|+|+||++++|+|++ .++|||
T Consensus 44 g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~~~~i~pG~~~~~~f~~-~~~Gt~ 110 (447)
T 2dv6_A 44 GVGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RSAIVNGKNASSTFSFVA-SKVGEF 110 (447)
T ss_dssp EESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------ECCCBCSTTBEEEEEEEC-CSCEEE
T ss_pred ccceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------ccceecCCCCeEEEEEEc-CCCEEE
Confidence 3456899999 899999999999999999998889999998642 257999999999999998 569999
Q ss_pred eeccChHHHH-hhceeeEEEcCCCCCCCC------------CCC-----CCccEEEEece-eecccHHHHHHHHHhcCCC
Q 009854 91 WWHAHILWLR-ATVHGAIVILPKRGVPYP------------FPK-----PHKEVTVILSE-WWKSDVEAVINEALKSGLA 151 (524)
Q Consensus 91 wyH~H~~~~~-~Gl~G~~iV~~~~~~~~~------------~~~-----~~~e~~l~~~d-~~~~~~~~~~~~~~~~g~~ 151 (524)
|||||..+++ +||.|.|+|+++....+. ++. ......+.+.. ..... ...|
T Consensus 111 ~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~l~~~~~~~~--------~~~g-- 180 (447)
T 2dv6_A 111 NYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPIGPRQAKTVRIDLETVEVKGQ--------LDDN-- 180 (447)
T ss_dssp EEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCCCSCCCCEEEEEEEEEEEEEE--------EETT--
T ss_pred EEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCccccCCCcEEEEEEEEEEEEEe--------ccCC--
Confidence 9999987776 899999999987643221 000 00011111110 00000 0001
Q ss_pred CCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCC-CCeEEEEEcCceeeEEEecCcccceeEecEEEeCC
Q 009854 152 PNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAAL-NEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAP 230 (524)
Q Consensus 152 ~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~-~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~p 230 (524)
...+.+++||+.. .|.+++++|++|||||+|.+. ...+.+|+||.. +.||.+ +++.|.|
T Consensus 181 -~~~~~~~~NG~~p---------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~----~~DG~~------~~~~i~p 240 (447)
T 2dv6_A 181 -TTYTYWTFNGKVP---------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT----GPGGAA------AFTQTDP 240 (447)
T ss_dssp -EEEEEEEETTBBS---------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGG------GGCCBCT
T ss_pred -ceeEEEEECCccC---------CCeEEecCCCEEEEEEEeCCCCceeEEEeecccc----CCCCCC------ccEEeCC
Confidence 1236799999851 278999999999999999985 357888888853 678873 3456999
Q ss_pred CceEEEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCC
Q 009854 231 GQTTNVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKK 310 (524)
Q Consensus 231 geR~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~ 310 (524)
|||++++|++++ +|.||++|+...... .. .....+.+.+..+.. +|..+... . ..+.+.....
T Consensus 241 G~~~~~~~~~~~-~G~~~yh~h~~~~~~--~~-~~Gl~g~l~v~~~~~--------~P~~d~~~-~----~~~~~~~~~~ 303 (447)
T 2dv6_A 241 GEETVVTFKALI-PGIYVYHCATPSVPT--HI-TNGMYGLLLVEPEGG--------LPQVDREF-Y----VMQGEIYTVK 303 (447)
T ss_dssp TCEEEEEEECCS-CEEEEEECCSSSHHH--HH-HTTCEEEEEEECTTC--------SCCCSEEE-E----EEEEEECBSS
T ss_pred CCEEEEEEECCC-CeEEEEEeCCCChHH--HH-hCCCEEEEEEeCCCC--------CCCCCeeE-E----EEecccccCC
Confidence 999999999987 599999998521100 00 123456777754321 11111100 0 0011100000
Q ss_pred CCCCCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCCCCCC
Q 009854 311 YPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQP 390 (524)
Q Consensus 311 ~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~ 390 (524)
.. ...... .+.... ........|.+||+.|...
T Consensus 304 ---~~--~~~g~~--~~~~~~-----~~~~~~~~~~iNG~~~~~~----------------------------------- 336 (447)
T 2dv6_A 304 ---SF--GTSGEQ--EMDYEK-----LINEKPEYFLFNGSVGSLT----------------------------------- 336 (447)
T ss_dssp ---CT--TCCEEC--CBBHHH-----HHTTCCSEEEETTSTTCCC-----------------------------------
T ss_pred ---cc--cccccc--cCChHH-----hhccCCCEEEECCcccCCC-----------------------------------
Confidence 00 000000 000000 0001112356676544110
Q ss_pred CCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCC-cCceeEecCC
Q 009854 391 ANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPV-ERNTIGVPSG 469 (524)
Q Consensus 391 ~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~-~rDTv~vpp~ 469 (524)
....+.++.|++++|+|+|.+ ....||||||||+|+||+.+.+ + +..|. +|||+.|+||
T Consensus 337 -------~~~~~~v~~g~~vrlrliN~~--~~~~h~~hlhGh~f~vv~~dG~-~----------~~~p~~~~dtv~l~pg 396 (447)
T 2dv6_A 337 -------RSHPLYASVGETVRIFFGVGG--PNFTSSFHVIGEIFDHVYSLGS-V----------VSPPLIGVQTVSVPPG 396 (447)
T ss_dssp -------CCCCEEECTTCEEEEEEEEEE--SSCCEEEEEETCCEEEECGGGC-S----------SSCCEEEESEEEECTT
T ss_pred -------CCcceEECCCCEEEEEEEeCC--CCceEeEEEcCcEEEEEEcCCc-c----------cCCCcccccEEEECCC
Confidence 013468889999999999965 2568999999999999998522 1 12344 6999999999
Q ss_pred cEEEEEEEeCCceeEEEEeechHhhhccceEEEEEcCCCC
Q 009854 470 GWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVDNGKG 509 (524)
Q Consensus 470 g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 509 (524)
+++.|+|++++||.|++|||+++|++.||+++|.|+....
T Consensus 397 ~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 397 GATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp EEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred cEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 9999999999999999999999999999999999987654
No 23
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1e-48 Score=380.11 Aligned_cols=114 Identities=23% Similarity=0.407 Sum_probs=98.2
Q ss_pred cccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCC----
Q 009854 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAG---- 85 (524)
Q Consensus 10 ~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~---- 85 (524)
...++++||++|||+||+++||+|+|+|+|.++++++|||||+++... +||++ ++||+|.||++++|+|++.+
T Consensus 23 ~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~~--~DG~~-~t~~~i~pG~~~~Y~f~~~~~~~~ 99 (276)
T 3kw8_A 23 GYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-MNKSDVEPGGTRTYTWRTHKPGRR 99 (276)
T ss_dssp EEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-TTTCSBCTTCEEEEEEECCCCEEC
T ss_pred ecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCCc--cCCCc-CCcCCCCCCCEEEEEEEcCCcccc
Confidence 334567899999999999999999999999999999999999999764 99999 89999999999999999943
Q ss_pred --------cccceeeccChHH------HH-hhceeeEEEcCCCCCCCCCCCCCccEEEEec
Q 009854 86 --------QRGTLWWHAHILW------LR-ATVHGAIVILPKRGVPYPFPKPHKEVTVILS 131 (524)
Q Consensus 86 --------~~Gt~wyH~H~~~------~~-~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~ 131 (524)
++||||||||.++ +. +||+|+|||+++.... .|+|++|+++
T Consensus 100 ~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~-----~drE~~l~l~ 155 (276)
T 3kw8_A 100 DDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHTIVFN 155 (276)
T ss_dssp TTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEEEEEE
T ss_pred ccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc-----cccceEEEec
Confidence 3799999999853 33 8999999999987532 2677777654
No 24
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=9.8e-49 Score=386.97 Aligned_cols=161 Identities=24% Similarity=0.426 Sum_probs=138.5
Q ss_pred EEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeC--------
Q 009854 13 IVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLA-------- 84 (524)
Q Consensus 13 ~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~-------- 84 (524)
++..||++|||+||+++||+|+|+|+|.|++++||||||+++... +||++ .+||+|.||++|+|+|++.
T Consensus 32 ~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~-~~~~~i~PG~~~~Y~~~~~~P~~~~~~ 108 (313)
T 3tas_A 32 LEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK-QSRSDVEPGGTRTYTWRTHVPGRRADG 108 (313)
T ss_dssp SSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST-TTTCCBCTTCEEEEEEBCCCCEECTTS
T ss_pred eecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc-cccCCcCCCCEEEEEEEeccCCccccc
Confidence 445699999999999999999999999999999999999998765 99997 6899999999999999862
Q ss_pred ----CcccceeeccChHHH-------HhhceeeEEEcCCCCCCCCCCCCCccEEEEeceeecccHHHHHHHHHhcCCCCC
Q 009854 85 ----GQRGTLWWHAHILWL-------RATVHGAIVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPN 153 (524)
Q Consensus 85 ----~~~Gt~wyH~H~~~~-------~~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~ 153 (524)
+++||||||||..++ .+||+|+|||+++... .+|+|++|+++||
T Consensus 109 ~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e~~l~~~d~-------------------- 163 (313)
T 3tas_A 109 TWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRTHTIVFNDM-------------------- 163 (313)
T ss_dssp CEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEEEEEEEETT--------------------
T ss_pred cccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----cccccceeeccch--------------------
Confidence 368999999997543 2899999999988753 3589999999986
Q ss_pred CCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEec
Q 009854 154 VSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVD 214 (524)
Q Consensus 154 ~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~D 214 (524)
++||+..+ ..+.++++.||+|||||+|++ ...|+||||||.|++++.|
T Consensus 164 -----t~Ng~~~~-------~~~~l~v~~Ge~vr~~liN~g-~~~hpfHlHGh~F~v~~~~ 211 (313)
T 3tas_A 164 -----TINNRPAH-------TGPDFEATVGDRVEFVMITHG-EYYHTFHLHGHRWADNRTG 211 (313)
T ss_dssp -----EETTCCTT-------CCCCEEEETTCEEEEEEEEES-SCCEEEEETTCCEESSTTS
T ss_pred -----hcccCCcc-------cccccccccCCEEEEEEeccc-ccceeeeecCCeeEEEEEC
Confidence 45776642 346799999999999999999 6789999999999865443
No 25
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=8.8e-47 Score=375.56 Aligned_cols=244 Identities=22% Similarity=0.324 Sum_probs=203.0
Q ss_pred CCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC--CCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeC
Q 009854 7 LCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK--YNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLA 84 (524)
Q Consensus 7 ~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~ 84 (524)
+|..+.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+.. +||++..+ .|.||++++|+|++
T Consensus 54 ~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~~~~--~i~PG~~~~y~f~~- 125 (327)
T 1kbv_A 54 DGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGAAAT--FTAPGRTSTFSFKA- 125 (327)
T ss_dssp TTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGTTTT--CBCTTEEEEEEEEC-
T ss_pred CCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCCcce--eecCCCEEEEEEEC-
Confidence 799999999999999999999999999999999986 589999999852 78876543 49999999999998
Q ss_pred CcccceeeccChH---HHH-hhceeeEEEcCCCCCCCCCCCCCccEEEEeceeecccHHH-------HHHHHHhcCCCCC
Q 009854 85 GQRGTLWWHAHIL---WLR-ATVHGAIVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEA-------VINEALKSGLAPN 153 (524)
Q Consensus 85 ~~~Gt~wyH~H~~---~~~-~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-------~~~~~~~~g~~~~ 153 (524)
+++||||||||.+ .+. +||+|+|||++++. ++.+|+|++++++||++..... .+.... + .
T Consensus 126 ~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~--~---~ 196 (327)
T 1kbv_A 126 LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAV--A---E 196 (327)
T ss_dssp CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTTCCEEECBCHHHHH--H---T
T ss_pred CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCccccccccccChhHhc--c---C
Confidence 6799999999974 333 89999999998653 3457899999999998864210 011111 1 2
Q ss_pred CCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCce
Q 009854 154 VSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQT 233 (524)
Q Consensus 154 ~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR 233 (524)
.++.++|||+.+++.. .+.+++++||+|||||+|++..+.+.|||+||+|+||+.||.+++|..++++.|+||||
T Consensus 197 ~~~~~~iNG~~~~~~~-----~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer 271 (327)
T 1kbv_A 197 QPEYVVFNGHVGALTG-----DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGS 271 (327)
T ss_dssp CCSEEEETTSTTTTSG-----GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEE
T ss_pred CCceEEEcCcccCCCC-----ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCE
Confidence 4589999999875421 26799999999999999999889999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCC
Q 009854 234 TNVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLG 278 (524)
Q Consensus 234 ~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 278 (524)
+||+|++++ ||.|+|+|+....+ ......++++|.+...
T Consensus 272 ~dv~v~~~~-pG~y~l~~h~~~~~-----~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 272 AIVEFKVDI-PGNYTLVDHSIFRA-----FNKGALGQLKVEGAEN 310 (327)
T ss_dssp EEEEEEECS-CEEEEEEESSTHHH-----HHSSCEEEEEEESCCC
T ss_pred EEEEEEeCC-CeEEEEEecccccc-----ccCCcEEEEEECCCCC
Confidence 999999998 69999999864321 0234689999987643
No 26
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=1.8e-46 Score=366.68 Aligned_cols=219 Identities=25% Similarity=0.348 Sum_probs=190.6
Q ss_pred CCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCc
Q 009854 7 LCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQ 86 (524)
Q Consensus 7 ~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~ 86 (524)
+|..+.+|+|||++|||+||+++||+|+|+|+|.++.+++|||||++. .++||+++++|++|+||++++|+|++ ++
T Consensus 50 ~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~~~~i~PG~~~~y~f~~-~~ 125 (288)
T 3gdc_A 50 PGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIGAGSIAPGQSFTYEFDA-TP 125 (288)
T ss_dssp TTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTSTTCSBCTTCEEEEEEEC-CS
T ss_pred CCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCccceeECCCCEEEEEEEc-CC
Confidence 388999999999999999999999999999999999999999999983 35999999999999999999999998 89
Q ss_pred ccceeeccChHH---HH-hhceeeEEEcCCCCCCCCCCCCCccEEEEeceeecccHHHHHHHHHhcCCCCCCCceEEEcC
Q 009854 87 RGTLWWHAHILW---LR-ATVHGAIVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTING 162 (524)
Q Consensus 87 ~Gt~wyH~H~~~---~~-~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG 162 (524)
+||||||||... +. +||+|+|||+++... +..++|++|+++||+.++ | ..++.++|||
T Consensus 126 ~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~----~~~d~e~~l~~~d~~~~~-----------g---~~~~~~~iNG 187 (288)
T 3gdc_A 126 FGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR----PPADDEMVMVMNGYNTDG-----------G---DDNEFYSVNG 187 (288)
T ss_dssp CEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC----CCCSEEEEEEEEEECCSS-----------T---TCCSEEEETT
T ss_pred CccEEEEecCcchHHHHhCcCeEEEEEeCCccC----CCCcceEEEEEeeEecCC-----------C---CCcceEEECc
Confidence 999999999873 33 899999999988753 235799999999998762 1 1357899999
Q ss_pred CCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCC-eEEEEEcCceeeEEEecCcccceeEecEEEeCCCceEEEEEEeC
Q 009854 163 HPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNE-ELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAA 241 (524)
Q Consensus 163 ~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~-~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~dv~v~~~ 241 (524)
+.+++ ..+.++++.|++|||||+|++... .|+||||||.|+|++.++....|...|++.|.||||++|+++++
T Consensus 188 ~~~~~------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~ 261 (288)
T 3gdc_A 188 LPFHF------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFP 261 (288)
T ss_dssp STTHH------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEEESEEEEETTCEEEEEECCC
T ss_pred ccccc------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCceeeEEEeCCCceEEEEEECC
Confidence 98621 124689999999999999999544 79999999999999844433367999999999999999999999
Q ss_pred CCCCceEEEEeeC
Q 009854 242 HATGKYLVAASPF 254 (524)
Q Consensus 242 ~~~g~~~~~~~~~ 254 (524)
+ ||.|.++||..
T Consensus 262 ~-pG~~~~hCH~~ 273 (288)
T 3gdc_A 262 Y-PGKFMFHAHKT 273 (288)
T ss_dssp S-CEEEEEECSSH
T ss_pred C-CEEEEEEecCh
Confidence 7 69999999853
No 27
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.6e-46 Score=425.21 Aligned_cols=400 Identities=14% Similarity=0.126 Sum_probs=263.5
Q ss_pred CccccEEEEcCcCCC--cEEEEecCCEEEEEEEeCCCCCceEEecCccccC-CCCCCCCCccccccCCCCCceEEEEEeC
Q 009854 8 CSTKPIVTVNGYFPG--PTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLR-TCWADGPAYITQCPIQPGQNYIYNFTLA 84 (524)
Q Consensus 8 g~~~~~~~~NG~~pg--P~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~-~~~~DG~~~~~q~~i~PG~~~~y~~~~~ 84 (524)
|..+.+.++||++|| |+|++++||+|+++|.|. .+.+||||+++.. +.++||++.+| |+|.||.+++|+|.+
T Consensus 615 ~~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~- 689 (1065)
T 2j5w_A 615 QESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP- 689 (1065)
T ss_dssp HHHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-
T ss_pred cccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-
Confidence 356789999999999 889999999999999975 4559999999988 88899999999 999999999999998
Q ss_pred CcccceeeccChHHHH-hhceeeEEEcCCCCCCCCCCCCCccEEEEe----ceeecccHHHHHHHHH-hcCCCCCCCceE
Q 009854 85 GQRGTLWWHAHILWLR-ATVHGAIVILPKRGVPYPFPKPHKEVTVIL----SEWWKSDVEAVINEAL-KSGLAPNVSDAH 158 (524)
Q Consensus 85 ~~~Gt~wyH~H~~~~~-~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~----~d~~~~~~~~~~~~~~-~~g~~~~~~~~~ 158 (524)
.++||||||||...++ +||.|.++|++......+...++.|.++.+ .||++........+.. ..+.. +...
T Consensus 690 ~~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~ 766 (1065)
T 2j5w_A 690 DTEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNA 766 (1065)
T ss_dssp CSCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCT
T ss_pred CCCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---ccce
Confidence 6999999999999887 999999999987655455556788999999 8999876654433221 12211 1222
Q ss_pred EEcCCCCC----------------CCCC----------CCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEE
Q 009854 159 TINGHPGP----------------LSSC----------PSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVE 212 (524)
Q Consensus 159 ~iNG~~~~----------------~~~~----------~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via 212 (524)
++|+.... .+.. .+...|.|++++||++++||.|.. ...+.||.||... ..
T Consensus 767 ~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~-~~~~sih~HGl~~--~~ 843 (1065)
T 2j5w_A 767 FLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHGVQT--ES 843 (1065)
T ss_dssp TTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECS-SSCBCCEESSCBC--SC
T ss_pred eecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCC-CCCceEeeccccc--cC
Confidence 23332100 0111 012448999999999999999997 6778888887543 22
Q ss_pred ecCcccceeEecEEEeCCCceEEEEEEeCCC---------CCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCC
Q 009854 213 VDAAYVKPFKTETVLIAPGQTTNVLLSAAHA---------TGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATT 283 (524)
Q Consensus 213 ~DG~~~~P~~~d~v~l~pgeR~dv~v~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~ 283 (524)
. | ...+.||++++..+.+.+. +|.||.+++..... .+. ....+.|.+........
T Consensus 844 ~-~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~---q~~-~GL~G~liV~~~~~l~~-- 907 (1065)
T 2j5w_A 844 S-T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVK---DLY-SGLIGPLIVCRRPYLKV-- 907 (1065)
T ss_dssp S-C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHH---HHH-TTCEEEEEEECCC------
T ss_pred C-C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHH---hhh-ccccceeEecCcccccc--
Confidence 2 2 1256799998888887642 25899998742100 011 12333343332111000
Q ss_pred CCCCCCCCCccccccccccccccCCCCCCCCCCCCcceEEEEEec-cCccCCccccCCceEEEEecCeeeec-C-cchhh
Q 009854 284 LTVPPPRNATPVAANFTASLRSLNSKKYPARVPLKIDHSLFFTIG-LGINPCATCVNGSRVVADINNVTFVM-P-TISLL 360 (524)
Q Consensus 284 ~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~in~~~~~~-p-~~~~l 360 (524)
. ..+ .+.++.+.+. +.. ++ ......|+.+|.. | .++++
T Consensus 908 -~----------------------------~~~--~d~D~~l~~~~~d~-------~~-~~y~~~n~~~~~~~P~~v~~~ 948 (1065)
T 2j5w_A 908 -F----------------------------NPR--RKLEFALLFLVFDE-------NE-SWYLDDNIKTYSDHPEKVNKD 948 (1065)
T ss_dssp ------------------------------CCC--CEEEEEEEEEEEEG-------GG-STTHHHHHHHHCSCGGGCCTT
T ss_pred -c----------------------------CCC--cceEEEEEEEeecC-------Cc-ceeeccCcccccCCccccCcc
Confidence 0 000 1111111110 000 00 0000011112210 0 11111
Q ss_pred hhhhccccccccCCCCCCCCccccCCCCCCCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeec
Q 009854 361 QAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRG 440 (524)
Q Consensus 361 ~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g 440 (524)
...+.. .+..+.++| ........+.++.|++|+|+|.|.+. ..+.|||||||+.|+|++++
T Consensus 949 ~~~~~~------------~~~~~~iNG------~~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlHG~~F~vv~~~ 1009 (1065)
T 2j5w_A 949 DEEFIE------------SNKMHAING------RMFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGHSFQYKHRG 1009 (1065)
T ss_dssp CHHHHH------------HTEEEEETT------BCTTCCCCCEEETTCEEEEEEEECCS-TTCCEEEEESSCCEEETTTT
T ss_pred hhhhhc------------cCceEEECC------ccCCCCccEEeCCCCEEEEEEEeCCC-CCcceeEEEcccEEEEEecC
Confidence 100000 000000001 11112345688899999999999652 35689999999999999763
Q ss_pred CCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeCCceeEEEEeechHhhhccceEEEEEcCCCC
Q 009854 441 LGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVDNGKG 509 (524)
Q Consensus 441 ~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 509 (524)
|.|||||.|+||++++|+|++||||.|+||||+++|++.|||++|.|.+.+.
T Consensus 1010 -----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1010 -----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp -----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred -----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 5789999999999999999999999999999999999999999999987653
No 28
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=2.1e-44 Score=359.64 Aligned_cols=109 Identities=24% Similarity=0.436 Sum_probs=93.4
Q ss_pred EcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCC----------
Q 009854 16 VNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAG---------- 85 (524)
Q Consensus 16 ~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~---------- 85 (524)
+||++|||+|+|++||+|+|+|+|.++++++|||||+.+.. ++||++ ++||+|.||++++|+|++.+
T Consensus 70 ~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~~--~~DG~~-~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~ 146 (343)
T 3cg8_A 70 GKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWR 146 (343)
T ss_dssp TCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCEE
T ss_pred CCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccCC--cCCCcc-cccccccCCCEEEEEEEeCCCCcccccccC
Confidence 37999999999999999999999999999999999999874 499998 89999999999999999832
Q ss_pred --cccceeeccChH------HHH-hhceeeEEEcCCCCCCCCCCCCCccEEEEece
Q 009854 86 --QRGTLWWHAHIL------WLR-ATVHGAIVILPKRGVPYPFPKPHKEVTVILSE 132 (524)
Q Consensus 86 --~~Gt~wyH~H~~------~~~-~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d 132 (524)
++|+||||||.. .+. +||+|++||+++.... +|+|++|+++|
T Consensus 147 ~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~~-----pd~e~~l~~~d 197 (343)
T 3cg8_A 147 PGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHTIVFND 197 (343)
T ss_dssp CCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEEEEEET
T ss_pred CCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCCC-----CCceEEEEccc
Confidence 359999999963 233 8999999999876532 46777777765
No 29
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=5.7e-44 Score=350.03 Aligned_cols=200 Identities=20% Similarity=0.304 Sum_probs=173.0
Q ss_pred EEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeC---------
Q 009854 14 VTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLA--------- 84 (524)
Q Consensus 14 ~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~--------- 84 (524)
+++||++|||+||+++||+|+|+|+|.|++++||||||+++.+. +||++ ++||+|.||++|+|+|++.
T Consensus 49 ~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~~-~~~~~i~PG~t~~Y~~~~~~~~~~~~~~ 125 (299)
T 3t9w_A 49 APGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGTL-MNGSAVMPGQTRRYTWRSHVGYRRADGS 125 (299)
T ss_dssp STTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-TTTCCBCTTCEEEEEEBCCCCEECTTSC
T ss_pred cCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCCc-cccCccCCCCeEEEEEEeecccccCCCc
Confidence 34599999999999999999999999999999999999998765 99996 8999999999999999873
Q ss_pred ---CcccceeeccChHHH-------HhhceeeEEEcCCCCCCCCCCCCCccEEEEeceeecccHHHHHHHHHhcCCCCCC
Q 009854 85 ---GQRGTLWWHAHILWL-------RATVHGAIVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAVINEALKSGLAPNV 154 (524)
Q Consensus 85 ---~~~Gt~wyH~H~~~~-------~~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~ 154 (524)
+++||||||||..++ .+||+|+|||+++.+. .+|+|++|++++|
T Consensus 126 ~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e~~l~~~~~--------------------- 179 (299)
T 3t9w_A 126 WAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQFTVVFNDM--------------------- 179 (299)
T ss_dssp EECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEEEETT---------------------
T ss_pred CCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Cccccceeeeeee---------------------
Confidence 368999999997542 2799999999988753 3589999998765
Q ss_pred CceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccc---eeEecEEEeCCC
Q 009854 155 SDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVK---PFKTETVLIAPG 231 (524)
Q Consensus 155 ~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~---P~~~d~v~l~pg 231 (524)
.+||+.. ...+.++++.||+|||||+|++ ...|+||||||.|+++..|+.... +..+|++.|.||
T Consensus 180 ----~~Ng~~~-------~~~p~l~v~~Ge~Vr~~liN~~-~~~HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PG 247 (299)
T 3t9w_A 180 ----MINNRAH-------HDAPTFEANLGERVEWIAIGHG-SNFHTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPG 247 (299)
T ss_dssp ----EETTCCT-------TCCCEEEEETTCEEEEEEEEES-SCCCEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTT
T ss_pred ----eecCccc-------cccccceecCCCEEEEEEEecc-ccceeeeEecceEEEEecccccCCcCCCCceeeEEeCCc
Confidence 3677765 2457899999999999999999 577999999999999999887653 457899999999
Q ss_pred ceEEEEEEeCC--CCCceEEEEeeC
Q 009854 232 QTTNVLLSAAH--ATGKYLVAASPF 254 (524)
Q Consensus 232 eR~dv~v~~~~--~~g~~~~~~~~~ 254 (524)
||++++|.+.+ .||.|+++||..
T Consensus 248 e~~~~~via~~~dnPG~w~~HCHi~ 272 (299)
T 3t9w_A 248 VSFGFQVIAGEGVGPGMWMYHCHVQ 272 (299)
T ss_dssp CEEEEEEETTTTTCSEEEEEEECSH
T ss_pred eeEEEEEEEeeCCCCeeEEEEcCCH
Confidence 99999997654 379999999963
No 30
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=4.3e-43 Score=364.71 Aligned_cols=247 Identities=21% Similarity=0.263 Sum_probs=203.3
Q ss_pred CCCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC--CCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEe
Q 009854 6 RLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK--YNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTL 83 (524)
Q Consensus 6 ~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~ 83 (524)
++|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.. +||.+..+ +|.||++++|+|++
T Consensus 43 ~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~~~~--~i~pg~~~~y~f~~ 115 (442)
T 2zoo_A 43 ADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGAESS--FTAPGHTSTFNFKA 115 (442)
T ss_dssp ETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGGC--CBCTTCEEEEEEEC
T ss_pred CCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCCccE--EECCCCEEEEEEEc
Confidence 4799999999999999999999999999999999985 599999999873 68876543 59999999999998
Q ss_pred CCcccceeeccCh---HHHH-hhceeeEEEcCCCCCCCCCCCCCccEEEEeceeecccHHHH-----HHHHHhcCCCCCC
Q 009854 84 AGQRGTLWWHAHI---LWLR-ATVHGAIVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEAV-----INEALKSGLAPNV 154 (524)
Q Consensus 84 ~~~~Gt~wyH~H~---~~~~-~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~-----~~~~~~~g~~~~~ 154 (524)
+++||||||||. ..+. +||+|+|||++++. .+.+++|++|+++||++...... +......+ ..
T Consensus 116 -~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~----~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~---~~ 187 (442)
T 2zoo_A 116 -LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEG----LAPVDREYYLVQGDFYTKGEFGEAGLQPFDMAKAID---ED 187 (442)
T ss_dssp -CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTTCCEEECBCHHHHHT---TC
T ss_pred -CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCC----CCCCCceEEEEeeeeeccCcccccccccCChhHhcc---CC
Confidence 789999999974 3344 89999999997753 23568999999999988653100 00001111 34
Q ss_pred CceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceE
Q 009854 155 SDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTT 234 (524)
Q Consensus 155 ~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~ 234 (524)
++.++|||+.++.. ..+.+++++|++|||||+|+|....|.|||+||+|+||+.||.+++|..++++.|.||||+
T Consensus 188 ~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~ 262 (442)
T 2zoo_A 188 ADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAA 262 (442)
T ss_dssp CSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEE
T ss_pred CCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeE
Confidence 68999999986321 1257999999999999999998899999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCC
Q 009854 235 NVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLG 278 (524)
Q Consensus 235 dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 278 (524)
||+|++++ +|.|+++|+.+... ......++++|.+...
T Consensus 263 ~v~v~~~~-~G~y~~~~~~~~~~-----~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 263 IVEFKVEV-PGTFILVDHSIFRA-----FNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEEEECCS-CEEEEEEESSTHHH-----HTTSCEEEEEEESCCC
T ss_pred EEEEEcCC-CCeEEEEecccccc-----cccCceEEEEecCCCC
Confidence 99999997 69999999865321 1235689999987654
No 31
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=1.5e-41 Score=339.53 Aligned_cols=252 Identities=20% Similarity=0.245 Sum_probs=191.6
Q ss_pred CCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCc
Q 009854 7 LCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQ 86 (524)
Q Consensus 7 ~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~ 86 (524)
+|+.+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++......||.+.+++ |.||++++|+|++ .+
T Consensus 48 ~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~f~~-~~ 121 (333)
T 1mzy_A 48 EDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGGLTL--INPGEKVVLRFKA-TR 121 (333)
T ss_dssp TTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEEC-CS
T ss_pred CCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCceeE--eCCCCEEEEEEEC-CC
Confidence 6999999999999999999999999999999999 5789999999876433555556664 9999999999998 78
Q ss_pred ccceeeccChHH-----HH-hhceeeEEEcCCCCCCCC--C-CCCCccEEEEeceeecc--cHH---------HHHHHHH
Q 009854 87 RGTLWWHAHILW-----LR-ATVHGAIVILPKRGVPYP--F-PKPHKEVTVILSEWWKS--DVE---------AVINEAL 146 (524)
Q Consensus 87 ~Gt~wyH~H~~~-----~~-~Gl~G~~iV~~~~~~~~~--~-~~~~~e~~l~~~d~~~~--~~~---------~~~~~~~ 146 (524)
+||||||||.++ +. +||+|++||++++..+.+ . ..+|+|++|+++||++. ... ..+....
T Consensus 122 ~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~ 201 (333)
T 1mzy_A 122 AGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMV 201 (333)
T ss_dssp CEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHH
T ss_pred CEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccCccccccccccccccccccchh
Confidence 999999999863 44 899999999976542211 1 14589999999999873 111 0111000
Q ss_pred hcCCCCCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccc-ee-Eec
Q 009854 147 KSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVK-PF-KTE 224 (524)
Q Consensus 147 ~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~-P~-~~d 224 (524)
... ....++.++|||+.+++. ..+.+++++||+||||++|++. ......+++|.|+|++ ||.+++ |. .+|
T Consensus 202 ~~~-~~~~~~~~~ING~~~~~~-----~~~~l~v~~Ger~Rl~n~~~~~-~~~~h~i~~h~~~Vi~-dG~~~~~p~~~~d 273 (333)
T 1mzy_A 202 AVM-DTLIPSHIVFNGAVGALT-----GEGALKAKVGDNVLFVHSQPNR-DSRPHLIGGHGDLVWE-TGKFHNAPERDLE 273 (333)
T ss_dssp HHH-TTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSS-CBCEEEETCCEEEEET-TCCTTSCCEEEES
T ss_pred HHh-hccCCcEEEECCcccccC-----CCcceEecCCCEEEEEECCCCC-ccccEEECCCCeEEEe-CCcccCCCccCcc
Confidence 000 124568999999986431 2467999999998887777662 2223348899999999 999985 44 589
Q ss_pred EEEeCCCceEEEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCC
Q 009854 225 TVLIAPGQTTNVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLG 278 (524)
Q Consensus 225 ~v~l~pgeR~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 278 (524)
++.|+||||+||+|++++ ||+|+++||...... .....++++|.+...
T Consensus 274 tv~l~pGer~~v~v~a~~-pG~y~~~ch~~~h~~-----~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 274 TWFIRGGTAGAALYKFLQ-PGVYAYVNHNLIEAV-----HKGATAHVLVEGEWD 321 (333)
T ss_dssp BCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHH-----TTCCEEEEEEESCCC
T ss_pred eEEECCCceEEEEEEcCC-CEEEEEecChhhhHh-----hCCCEEEEEEcCCCC
Confidence 999999999999999998 699999999653210 134578999986543
No 32
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=1.1e-41 Score=341.84 Aligned_cols=256 Identities=21% Similarity=0.289 Sum_probs=191.4
Q ss_pred ccCCCCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEE
Q 009854 3 NATRLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFT 82 (524)
Q Consensus 3 ~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~ 82 (524)
++++||+.+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++......||...+++ |.||++++|+|+
T Consensus 51 ~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~~~ 125 (340)
T 2bw4_A 51 VIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGALTQ--VNPGEETTLRFK 125 (340)
T ss_dssp ECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEE
T ss_pred EECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCccceE--eCCCCEEEEEEE
Confidence 356789999999999999999999999999999999998 678999988765433344445554 999999999999
Q ss_pred eCCcccceeeccChHH----HH-hhceeeEEEcCCCCCC--CCC-CCCCccEEEEeceeecc--cHH---------HHHH
Q 009854 83 LAGQRGTLWWHAHILW----LR-ATVHGAIVILPKRGVP--YPF-PKPHKEVTVILSEWWKS--DVE---------AVIN 143 (524)
Q Consensus 83 ~~~~~Gt~wyH~H~~~----~~-~Gl~G~~iV~~~~~~~--~~~-~~~~~e~~l~~~d~~~~--~~~---------~~~~ 143 (524)
+ .++||||||||.++ +. +||+|+|||++++... .+. ..+++|++|+++||++. ... ..+.
T Consensus 126 ~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~ 204 (340)
T 2bw4_A 126 A-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYE 204 (340)
T ss_dssp C-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEECCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHH
T ss_pred C-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcCcceeEEEeeeeeeeccccCCccccccccccccc
Confidence 9 67999999999863 44 8999999999875311 111 14688999999999873 111 1111
Q ss_pred HHHhcCCCCCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccc-ee-
Q 009854 144 EALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVK-PF- 221 (524)
Q Consensus 144 ~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~-P~- 221 (524)
..... .....++.++|||+.++. ...+.+++++||++||+++|.+ ...+..++++|.|+|++ ||.++. |.
T Consensus 205 ~~~~~-~~~~~~~~~~iNG~~~~~-----~~~~~l~v~~G~r~Rl~n~~~~-~~~~~~~i~gh~~~Vi~-dG~~~~~p~~ 276 (340)
T 2bw4_A 205 DAVKA-MRTLTPTHIVFNGAVGAL-----TGDHALTAAVGERVLVVHSQAN-RDTRPHLIGGHGDYVWA-TGKFRNPPDL 276 (340)
T ss_dssp HHHHH-HHTTCCSEEEETTSTTTT-----SGGGCEEEETTCEEEEEEEESS-SCBCEEEETCCEEEEET-TCCTTSCCEE
T ss_pred chhhH-hhcCCCCEEEECCccCCc-----cCCCceEcCCCCEEEEEECCCC-CccceEEecCcceEEeC-CCcccCCccc
Confidence 10000 011345899999998632 1147899999998887766665 33445568999999997 998874 43
Q ss_pred EecEEEeCCCceEEEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCC
Q 009854 222 KTETVLIAPGQTTNVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLG 278 (524)
Q Consensus 222 ~~d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 278 (524)
.+|++.|+||||+||+|++++ ||+|+++||...+.. .....++++|.+...
T Consensus 277 ~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h~-----~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 277 DQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEAF-----ELGAAGHFKVTGEWN 327 (340)
T ss_dssp EESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHH-----TTSCEEEEEEESCCC
T ss_pred cceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHHH-----hCCCEEEEEECCCCc
Confidence 589999999999999999998 699999999642110 124568899986544
No 33
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=1.8e-41 Score=339.71 Aligned_cols=255 Identities=23% Similarity=0.307 Sum_probs=189.0
Q ss_pred ccCCCCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEE
Q 009854 3 NATRLCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFT 82 (524)
Q Consensus 3 ~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~ 82 (524)
++++||..+.+|+|||++|||+|++++||+|+|+|+|.+. ++||||+++....++||.+.+++ |.||++++|+|+
T Consensus 45 ~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~~~~--i~pG~~~~y~f~ 119 (336)
T 1oe1_A 45 VIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAKLTN--VNPGEQATLRFK 119 (336)
T ss_dssp ECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEE
T ss_pred EECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcceEE--eCCCCEEEEEEE
Confidence 4678899999999999999999999999999999999974 33444444443334666666665 999999999999
Q ss_pred eCCcccceeeccChHH----HH-hhceeeEEEcCCCCCCCCC---CCCCccEEEEeceeecc--cHHH---------HHH
Q 009854 83 LAGQRGTLWWHAHILW----LR-ATVHGAIVILPKRGVPYPF---PKPHKEVTVILSEWWKS--DVEA---------VIN 143 (524)
Q Consensus 83 ~~~~~Gt~wyH~H~~~----~~-~Gl~G~~iV~~~~~~~~~~---~~~~~e~~l~~~d~~~~--~~~~---------~~~ 143 (524)
+ .++||||||||.++ +. +||+|+|||++++....+. ..+|+|++|+++||++. +... .+.
T Consensus 120 ~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~ 198 (336)
T 1oe1_A 120 A-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYG 198 (336)
T ss_dssp C-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHH
T ss_pred C-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccccCCceeeccccccccc
Confidence 8 67999999999864 33 8999999999875422111 14688999999999874 1110 000
Q ss_pred HHHhcCCCCCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEE-EEcCceeeEEEecCccccee-
Q 009854 144 EALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFF-KIAGHKLTVVEVDAAYVKPF- 221 (524)
Q Consensus 144 ~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~-~l~gh~~~via~DG~~~~P~- 221 (524)
..... .....++.++|||+.+++. ..+.+++++||+||| +|++..+.+.+ +|++|.|+|++ ||.+++|.
T Consensus 199 ~~~~~-~~~~~~~~~liNG~~~~~~-----~~~~l~v~~GervRl--in~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~ 269 (336)
T 1oe1_A 199 DTVQV-MRTLTPSHIVFNGKVGALT-----GANALTAKVGETVLL--IHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQ 269 (336)
T ss_dssp HHHHH-HHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEE--EEEESSSCBCEEETTCCEEEEET-TCCTTSCCE
T ss_pred chhhH-hhcCCCCEEEECCeeccCC-----CCcceEcCCCCEEEE--EecCCCCccceEEECCcCceEeC-CCcCcCCcc
Confidence 00000 0113568999999986431 137899999997765 56665555544 45999999997 99998653
Q ss_pred -EecEEEeCCCceEEEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCC
Q 009854 222 -KTETVLIAPGQTTNVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLG 278 (524)
Q Consensus 222 -~~d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 278 (524)
.++++.|+||||+||+|++++ ||.|+++|+..... ......++++|.+...
T Consensus 270 ~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~-----~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 270 RDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEA-----FELGAAGHIKVEGKWN 321 (336)
T ss_dssp EEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH-----HTTSCEEEEEEESCCC
T ss_pred ccceEEEECCCCcEEEEEEcCC-CceEEEEechhhcc-----ccCCCeEEEEECCCCC
Confidence 479999999999999999998 69999999964221 0235678999987554
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=1.1e-40 Score=361.82 Aligned_cols=220 Identities=20% Similarity=0.245 Sum_probs=168.0
Q ss_pred cCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccc--------cccCCCCCceEEEEEeCCc--
Q 009854 17 NGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYIT--------QCPIQPGQNYIYNFTLAGQ-- 86 (524)
Q Consensus 17 NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~--------q~~i~PG~~~~y~~~~~~~-- 86 (524)
++++|||+|||++||+|+|+|+|.++++++|||||+++... +||+++++ ||+|+||++++|+|+++++
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~g 140 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYEKS--SEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSG 140 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTS
T ss_pred ccCCcCceEEEeCCCEEEEEEEECCCCceEEecCcceeCCC--CCCccccCCCCcccccCcccCCCCeEEEEEECCcccC
Confidence 56899999999999999999999999999999999999764 99999876 9999999999999999554
Q ss_pred ---cc----ceeeccChHH--HH-hhceeeEEEcCCCCCCC--CCCCCCccEEEEec------eeecccHHHH-HHHHHh
Q 009854 87 ---RG----TLWWHAHILW--LR-ATVHGAIVILPKRGVPY--PFPKPHKEVTVILS------EWWKSDVEAV-INEALK 147 (524)
Q Consensus 87 ---~G----t~wyH~H~~~--~~-~Gl~G~~iV~~~~~~~~--~~~~~~~e~~l~~~------d~~~~~~~~~-~~~~~~ 147 (524)
+| |||||||.+. +. +||+|+|||+++..... ..+..++|++|+++ ||+++..... +....
T Consensus 141 p~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~- 219 (647)
T 1sdd_B 141 PENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRAS- 219 (647)
T ss_dssp CCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC------------
T ss_pred CCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCC-
Confidence 57 9999999964 33 89999999999864321 12334689999999 6776544321 11000
Q ss_pred cCCCCCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCC-eEEEEEcCceeeEEEecCcccceeEecEE
Q 009854 148 SGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNE-ELFFKIAGHKLTVVEVDAAYVKPFKTETV 226 (524)
Q Consensus 148 ~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~-~~~~~l~gh~~~via~DG~~~~P~~~d~v 226 (524)
......++.++|||+.++ .|.+++++|++|||||+|++... .|.||||||.|+|++.|| ..+|++
T Consensus 220 -~~~~~~~~~~~iNG~~~~--------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v 285 (647)
T 1sdd_B 220 -SEVKNSHEFHAINGMIYN--------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVW 285 (647)
T ss_dssp -----CCCEEEEETTBSSC--------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSE
T ss_pred -cchhhcCceeccCCEecC--------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceE
Confidence 011234688999999752 37899999999999999999764 899999999999999886 478999
Q ss_pred EeCCCceEEEEEEeCCCCCceEEEEeeC
Q 009854 227 LIAPGQTTNVLLSAAHATGKYLVAASPF 254 (524)
Q Consensus 227 ~l~pgeR~dv~v~~~~~~g~~~~~~~~~ 254 (524)
.|+||||+||+|++++ ||.|+++||..
T Consensus 286 ~l~pg~r~~v~~~~~~-pG~w~~hch~~ 312 (647)
T 1sdd_B 286 PLLPGSFKTLEMKASK-PGWWLLDTEVG 312 (647)
T ss_dssp EECTTEEEEEEEECCS-SEEEEEECCCH
T ss_pred EECCCeEEEEEEEecc-ceEeecccCcc
Confidence 9999999999999998 69999999963
No 35
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.9e-41 Score=333.98 Aligned_cols=215 Identities=19% Similarity=0.231 Sum_probs=160.7
Q ss_pred ccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcc------c--cccCCCCCceEEEEE
Q 009854 11 KPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYI------T--QCPIQPGQNYIYNFT 82 (524)
Q Consensus 11 ~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~------~--q~~i~PG~~~~y~~~ 82 (524)
++.+++| ++|||+|+|++||+|+|+|+|.++++++|||||+++... +||++.. + ||+|+||++++|+|+
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~ 125 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWI 125 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEE
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEE
Confidence 4556789 589999999999999999999999999999999997654 6766653 3 799999999999999
Q ss_pred eCCc---------ccceeeccChHH--HH-hhceeeEEEcCCCCCCC-C-CCCCCccEEEEeceeecccHHHHHHHHHhc
Q 009854 83 LAGQ---------RGTLWWHAHILW--LR-ATVHGAIVILPKRGVPY-P-FPKPHKEVTVILSEWWKSDVEAVINEALKS 148 (524)
Q Consensus 83 ~~~~---------~Gt~wyH~H~~~--~~-~Gl~G~~iV~~~~~~~~-~-~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~ 148 (524)
++++ +||||||||... +. +||+|+|||+++..... + ....++|++|+++||..... .
T Consensus 126 ~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~~---------~ 196 (306)
T 1sdd_A 126 ISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESKS---------W 196 (306)
T ss_dssp CCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTSS---------S
T ss_pred eCCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEecccccc---------c
Confidence 9544 379999999765 33 89999999998753211 1 12357899999999843211 0
Q ss_pred CCCCCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCC-CeEEEEEcCceeeEEEecCcccceeEecEEE
Q 009854 149 GLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALN-EELFFKIAGHKLTVVEVDAAYVKPFKTETVL 227 (524)
Q Consensus 149 g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~P~~~d~v~ 227 (524)
....++.++|||+.+. ..|.+++++|++|||||+|++.. ..|.||||||.|++ || ..+|++.
T Consensus 197 --~~~~~~~~~ING~~~~-------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~ 259 (306)
T 1sdd_A 197 --NQTSSLMYTVNGYVNG-------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAIT 259 (306)
T ss_dssp --SCCCCEEECSSSCCSS-------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCC
T ss_pred --ccCCCcceeeCCEecC-------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEE
Confidence 1123578999999752 23679999999999999999976 57899999999985 77 3589999
Q ss_pred eCCCceEEEEEEeCCCCCceEEEEeeCC
Q 009854 228 IAPGQTTNVLLSAAHATGKYLVAASPFL 255 (524)
Q Consensus 228 l~pgeR~dv~v~~~~~~g~~~~~~~~~~ 255 (524)
|.||||+||+|++++ ||.|+++|+...
T Consensus 260 l~pger~~v~~~~~~-pG~~~~hch~~~ 286 (306)
T 1sdd_A 260 LVSATSTTANMTVSP-EGRWTIASLIPR 286 (306)
T ss_dssp EETTCCBC---------CCCCCBCCSTT
T ss_pred ECCCcEEEEEEEcCC-CeEEEEEeCChH
Confidence 999999999999987 699999999643
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.8e-38 Score=330.77 Aligned_cols=243 Identities=22% Similarity=0.305 Sum_probs=196.9
Q ss_pred CCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC--CCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeC
Q 009854 7 LCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK--YNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLA 84 (524)
Q Consensus 7 ~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~ 84 (524)
+|..+.+|+|||++|||+|++++||+++|||+|.+. ..++|||||+.. +||++..++ |.||++++|.|++
T Consensus 179 ~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~~~~--i~pG~~~~~~~~~- 250 (447)
T 2dv6_A 179 DNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAFTQ--TDPGEETVVTFKA- 250 (447)
T ss_dssp TTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGGCC--BCTTCEEEEEEEC-
T ss_pred CCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCccEE--eCCCCEEEEEEEC-
Confidence 578888999999999999999999999999999985 679999999852 789876554 9999999999998
Q ss_pred CcccceeeccChH---HHH-hhceeeEEEcCCCCCCCCCCCCCccEEEEeceeecccHHH-------HHHHHHhcCCCCC
Q 009854 85 GQRGTLWWHAHIL---WLR-ATVHGAIVILPKRGVPYPFPKPHKEVTVILSEWWKSDVEA-------VINEALKSGLAPN 153 (524)
Q Consensus 85 ~~~Gt~wyH~H~~---~~~-~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-------~~~~~~~~g~~~~ 153 (524)
+++|+||||||.. .+. .||+|+|+|+++.. ++..++|++++++||++..... ..... .+ .
T Consensus 251 ~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~---~ 321 (447)
T 2dv6_A 251 LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGTSGEQEMDYEKL--IN---E 321 (447)
T ss_dssp CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTCCEECCBBHHHH--HT---T
T ss_pred CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCcccccccccCChHHh--hc---c
Confidence 6789999999963 333 89999999997653 3356889999999998653100 00111 11 2
Q ss_pred CCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccc-ee-EecEEEeCCC
Q 009854 154 VSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVK-PF-KTETVLIAPG 231 (524)
Q Consensus 154 ~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~-P~-~~d~v~l~pg 231 (524)
.++.++|||+.+++. ..+.+++++|++|||||+|++....|+||||||.|+||+.||.+++ |. .+|++.|.||
T Consensus 322 ~~~~~~iNG~~~~~~-----~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~pg 396 (447)
T 2dv6_A 322 KPEYFLFNGSVGSLT-----RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPG 396 (447)
T ss_dssp CCSEEEETTSTTCCC-----CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSSSCCEEEESEEEECTT
T ss_pred CCCEEEECCcccCCC-----CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcccCCCcccccEEEECCC
Confidence 357899999987432 1247999999999999999998889999999999999999999985 44 6899999999
Q ss_pred ceEEEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCC
Q 009854 232 QTTNVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLG 278 (524)
Q Consensus 232 eR~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 278 (524)
||++|+|++++ ||.|+++||..... .....++++|.+...
T Consensus 397 ~r~~i~~~~~~-pG~~~~hch~~~h~------~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 397 GATIVDFKIDR-AGRYILVDHALSRL------EHGLVGFLNVDGPKN 436 (447)
T ss_dssp EEEEEEEECCS-CEEEEEEESSGGGG------GGTCCEEEEECSCSC
T ss_pred cEEEEEEECCC-CEEEEEEecCcCcc------ccCCEEEEEEeCCCC
Confidence 99999999997 69999999964322 124578999986543
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=2.7e-39 Score=352.41 Aligned_cols=218 Identities=14% Similarity=0.129 Sum_probs=175.8
Q ss_pred cCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCC---------cccc
Q 009854 19 YFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAG---------QRGT 89 (524)
Q Consensus 19 ~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~---------~~Gt 89 (524)
++|||+||+++||+|+|+|+|.++.+++|||||+++.... .||+++ +||+|+||++|+|+|++.+ ++||
T Consensus 195 ~~pGP~Ir~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~~-~dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt 272 (770)
T 2r7e_B 195 GLLGPYIRAEVEDNIMVTFRNQASRPYSFYSSLISYEEDQ-RQGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKA 272 (770)
T ss_dssp CSCCCCCCCCSSSCEEEEEECCSSSCCCCCBTTCCCCCCS-SSCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEE
T ss_pred CCCCCeEEEEcCCEEEEEEEECCCCCcceeeccccccccc-CCCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCee
Confidence 5899999999999999999999999999999999999874 259988 8999999999999999954 8999
Q ss_pred eeeccChHHH--H-hhceeeEEEcCCCCCCCC--CCCCCccEEEEece------eecccHHHHHHHHHh-cC----CC--
Q 009854 90 LWWHAHILWL--R-ATVHGAIVILPKRGVPYP--FPKPHKEVTVILSE------WWKSDVEAVINEALK-SG----LA-- 151 (524)
Q Consensus 90 ~wyH~H~~~~--~-~Gl~G~~iV~~~~~~~~~--~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~-~g----~~-- 151 (524)
||||||.+.. . +||+|+|||+++...... .+..++|++|++++ |+++..... +.. .. ..
T Consensus 273 ~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~---~~~~p~~~~~~d~~ 349 (770)
T 2r7e_B 273 WAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMER---NCRAPCNIQMEDPT 349 (770)
T ss_dssp EEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSS---CSCCSSCCCSSSSS
T ss_pred EEeeccCCcHHHHhCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhh---cccCccccccCCcc
Confidence 9999999863 3 899999999998653211 12457899988754 444322100 000 00 00
Q ss_pred -CCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCC-CeEEEEEcCceeeEEEecCcccceeEecEEEeC
Q 009854 152 -PNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALN-EELFFKIAGHKLTVVEVDAAYVKPFKTETVLIA 229 (524)
Q Consensus 152 -~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~ 229 (524)
....+.++|||+.+. ..+.+++++|++|||||+|++.. ..|+||||||.|+|++.||. .+|++.|.
T Consensus 350 ~~~~~~~~~ING~~~~-------~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~ 417 (770)
T 2r7e_B 350 FKENYRFHAINGYIMD-------TLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLY 417 (770)
T ss_dssp STTTSCEECTTSCTTT-------TCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECC
T ss_pred ccccCCccccCCccCC-------CCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEEC
Confidence 012356899999751 34678999999999999999864 48999999999999999974 79999999
Q ss_pred CCceEEEEEEeCCCCCceEEEEeeC
Q 009854 230 PGQTTNVLLSAAHATGKYLVAASPF 254 (524)
Q Consensus 230 pgeR~dv~v~~~~~~g~~~~~~~~~ 254 (524)
||||++|+|++++ ||.|+++||..
T Consensus 418 Pg~~~~v~~~ad~-pG~w~~hcH~~ 441 (770)
T 2r7e_B 418 PGVFETVEMLPSK-AGIWRVECLIG 441 (770)
T ss_dssp TTCCCEEEECCSS-CBCCCBCCCSH
T ss_pred CCeEEEEEEEeCC-CCceEEEeccc
Confidence 9999999999998 69999999964
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=3.3e-37 Score=335.63 Aligned_cols=218 Identities=18% Similarity=0.239 Sum_probs=169.2
Q ss_pred CcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCC-----CCCccccccCCCCCceEEEEEeCCccc----
Q 009854 18 GYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWAD-----GPAYITQCPIQPGQNYIYNFTLAGQRG---- 88 (524)
Q Consensus 18 G~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~D-----G~~~~~q~~i~PG~~~~y~~~~~~~~G---- 88 (524)
..+|||+||+++||+|+|+|+|.++.++||||||+.+. .+|+| |++.++||+|.||++|+|+|++++++|
T Consensus 447 ~g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~ 525 (742)
T 2r7e_A 447 SGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKS 525 (742)
T ss_dssp SCSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSS
T ss_pred cCCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCccc
Confidence 36899999999999999999999999999999999975 44565 566788999999999999999966554
Q ss_pred -----ceeeccChHHHH---hhceeeEEEcCCCCCC-CC-CCCCCccEEEEece------eecccHHHHHHHHHh-cC-C
Q 009854 89 -----TLWWHAHILWLR---ATVHGAIVILPKRGVP-YP-FPKPHKEVTVILSE------WWKSDVEAVINEALK-SG-L 150 (524)
Q Consensus 89 -----t~wyH~H~~~~~---~Gl~G~~iV~~~~~~~-~~-~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~-~g-~ 150 (524)
|||||||.+.+. +||+|+|||+++.... .. ....|+|++|++++ |++..... .+.. .. .
T Consensus 526 d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~---~~~~~p~~v 602 (742)
T 2r7e_A 526 DPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQ---RFLPNPAGV 602 (742)
T ss_dssp SCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHH---HHSSSSSCS
T ss_pred CCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccchh---hcccCchhc
Confidence 999999997653 8999999999875321 11 12458999999965 44332211 1100 00 0
Q ss_pred C------CCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCC-CeEEEEEcCceeeEEEecCcccceeEe
Q 009854 151 A------PNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALN-EELFFKIAGHKLTVVEVDAAYVKPFKT 223 (524)
Q Consensus 151 ~------~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~P~~~ 223 (524)
. ......++|||+.+. ..+ +.+++||+|||||+|++.. ..|.||||||.|+|+ +..+
T Consensus 603 ~~~~~~~~~~~~~~~ING~~~~-------~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~ 666 (742)
T 2r7e_A 603 QLEDPEFQASNIMHSINGYVFD-------SLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYE 666 (742)
T ss_dssp CCCCHHHHGGGCCBCTTTTCSS-------CCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSB
T ss_pred ccccccccccCceeeecCcCCC-------CCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccce
Confidence 0 000134789999752 113 8999999999999998754 479999999999986 5678
Q ss_pred cEEEeCCCceEEEEEEeCCCCCceEEEEeeCCC
Q 009854 224 ETVLIAPGQTTNVLLSAAHATGKYLVAASPFLD 256 (524)
Q Consensus 224 d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~~~~ 256 (524)
|+|.|.||||++|+|++++ ||.|+++||....
T Consensus 667 Dtv~l~Pg~~~~v~~~ad~-pG~w~~hcH~~~H 698 (742)
T 2r7e_A 667 DTLTLFPFSGETVFMSMEN-PGLWILGCHNSDF 698 (742)
T ss_dssp CSSCCCCCSSEECCEECCC-CCCSCCEECCCST
T ss_pred eEEEECCCcEEEEEEEcCC-CeEEEEEeCCchH
Confidence 9999999999999999997 6999999997643
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.97 E-value=2.6e-30 Score=252.22 Aligned_cols=233 Identities=18% Similarity=0.196 Sum_probs=164.5
Q ss_pred ceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceEE
Q 009854 156 DAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTN 235 (524)
Q Consensus 156 ~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~d 235 (524)
..+++||+.. .|.|+++.|+++++||.|.. ...+.+|+||.. ..+.||.+. .+...+.||++++
T Consensus 55 ~~~~~ng~~p---------gP~i~~~~Gd~v~v~~~N~~-~~~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~ 118 (288)
T 3gdc_A 55 KGWSYNGRIP---------GPTLWAREGDALRIHFTNAG-AHPHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFT 118 (288)
T ss_dssp EEEEETTBSS---------CCEEEEETTCEEEEEEEECS-SSCBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEE
T ss_pred EEEEECCccC---------CCcEEEeCCCEEEEEEEeCC-CCcccEEecccc--ccccCCCCC----ccceeECCCCEEE
Confidence 6899999862 38999999999999999998 678999999986 457898753 2446789999999
Q ss_pred EEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCCCC
Q 009854 236 VLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPARV 315 (524)
Q Consensus 236 v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 315 (524)
+.+++++ +|.||++||...... ... ....+.+.+...... +
T Consensus 119 y~f~~~~-~Gt~~yH~H~~~~~~-~~~--~Gl~G~liV~~~~~~--------~--------------------------- 159 (288)
T 3gdc_A 119 YEFDATP-FGTHLYHCHQSPLAP-HIA--KGLYGGFIVEPKEGR--------P--------------------------- 159 (288)
T ss_dssp EEEECCS-CEEEEEECCCSSHHH-HHH--TTCEEEEEEECSSCC--------C---------------------------
T ss_pred EEEEcCC-CccEEEEecCcchHH-HHh--CcCeEEEEEeCCccC--------C---------------------------
Confidence 9999975 699999999632100 001 123334444321110 0
Q ss_pred CCCcceEEEEEecc-CccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCCCCCCCCcc
Q 009854 316 PLKIDHSLFFTIGL-GINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQ 394 (524)
Q Consensus 316 p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 394 (524)
..++++.+.+.. ...+ ....-.+.|||+.|...
T Consensus 160 --~~d~e~~l~~~d~~~~~-----g~~~~~~~iNG~~~~~~--------------------------------------- 193 (288)
T 3gdc_A 160 --PADDEMVMVMNGYNTDG-----GDDNEFYSVNGLPFHFM--------------------------------------- 193 (288)
T ss_dssp --CCSEEEEEEEEEECCSS-----TTCCSEEEETTSTTHHH---------------------------------------
T ss_pred --CCcceEEEEEeeEecCC-----CCCcceEEECccccccc---------------------------------------
Confidence 012333222211 0000 00112367887655210
Q ss_pred cCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEE
Q 009854 395 TNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAI 474 (524)
Q Consensus 395 ~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~i 474 (524)
...+.++.|++++|.+.|.+. .+..|||||||+.|+|++.+.. +..+.++||+.|+||+++.|
T Consensus 194 ----~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~~------------~~~~~~~Dtv~v~pg~~~~v 256 (288)
T 3gdc_A 194 ----DFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGTM------------LTPSEYTDTISQVQGQRGIL 256 (288)
T ss_dssp ----HSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTCC------------SSCSEEESEEEEETTCEEEE
T ss_pred ----CcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCCc------------cCCCceeeEEEeCCCceEEE
Confidence 113577899999999999651 1346999999999999975421 23457999999999999999
Q ss_pred EEEeCCceeEEEEeechHhhhccceEEEEEcC
Q 009854 475 RFRADNPGVWFMHCHLEVHTTWGLKMAFIVDN 506 (524)
Q Consensus 475 rf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 506 (524)
+|++++||.|+||||+++|++.|||..|+|.+
T Consensus 257 ~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 257 ELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 99999999999999999999999999999863
No 40
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.96 E-value=3.2e-28 Score=240.33 Aligned_cols=243 Identities=17% Similarity=0.194 Sum_probs=164.4
Q ss_pred ceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeE-EEecCcccceeEecEEEeCCCceE
Q 009854 156 DAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTV-VEVDAAYVKPFKTETVLIAPGQTT 234 (524)
Q Consensus 156 ~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~v-ia~DG~~~~P~~~d~v~l~pgeR~ 234 (524)
..+++||+. ..|+|+++.|+++++||.|.. ...+.+|+||....- .+.||.+. +....|.||+++
T Consensus 23 ~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l-~~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQV---------PAPLIHVMEGDDVTVNVTNMT-TLPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECS-SSCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCcc---------CCceEEEeCCCEEEEEEEeCC-CCceeEEecCcCCCCCcccCCCcc----cccccCCCCCEE
Confidence 579999985 238999999999999999998 678899999987542 36799753 234578999999
Q ss_pred EEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCCC
Q 009854 235 NVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPAR 314 (524)
Q Consensus 235 dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~ 314 (524)
+..+++++ +|.||.+||.....+ ... ....+.|......... .+
T Consensus 89 ~y~f~~~~-~Gt~wYH~H~~~~~~-~~~--~Gl~G~lIV~~~~~~~------~~-------------------------- 132 (318)
T 3g5w_A 89 TYKFKAEP-AGTMWYHCHVNVNEH-VTM--RGMWGPLIVEPKNPLP------IE-------------------------- 132 (318)
T ss_dssp EEEEECCS-CEEEEEECCSSHHHH-HHH--SCCEEEEEEECSSCCH------HH--------------------------
T ss_pred EEEEEcCC-CEEEEEEccCChhhh-hcc--CCCEEEEEEcCCCccc------cc--------------------------
Confidence 99999986 699999999521100 001 1233333333221100 00
Q ss_pred CCCCcceEEEEEecc---Cc--cCCcccc-CCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCCCC
Q 009854 315 VPLKIDHSLFFTIGL---GI--NPCATCV-NGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGT 388 (524)
Q Consensus 315 ~p~~~~~~~~~~~~~---~~--~~~~~~~-~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~ 388 (524)
...++++.+.++- .. ....... ....-.|.|||+.|.
T Consensus 133 --~~~d~e~~l~l~dw~~~~~~~~~~~~~~~~~~d~~~ING~~~~----------------------------------- 175 (318)
T 3g5w_A 133 --KTVTKDYILMLSDWVSSWANKPGEGGIPGDVFDYYTINAKSFP----------------------------------- 175 (318)
T ss_dssp --HTCCEEEEEEEEEECGGGTTCTTCCCCTTCCCCEEEETTBCBT-----------------------------------
T ss_pred --ccccceeEEEEEeeccccccccccCCCCCCcCcEEEEcCcCCC-----------------------------------
Confidence 0011111111000 00 0000000 000113667776541
Q ss_pred CCCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecC
Q 009854 389 QPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPS 468 (524)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp 468 (524)
....+.++.|++++|+|.|.+ ...||||||||.|+|+++..+ .+.+|.+|||+.|+|
T Consensus 176 ---------~~~~l~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~dG~-----------~~~~p~~~dtv~l~p 232 (318)
T 3g5w_A 176 ---------ETQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKDGF-----------PLDKPIKGDTVLIGP 232 (318)
T ss_dssp ---------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTSCEEEEEETTE-----------EEEEEEEESEEEECT
T ss_pred ---------CCccEEeCCCCEEEEEEEeCC---CceEEEEECCcEEEEEecCCc-----------ccCCCccccEEEECC
Confidence 112367889999999999975 457999999999999998422 123567899999999
Q ss_pred CcEEEEEEEeCCceeEEEEeechHhhh------ccceEEEEEcCCC
Q 009854 469 GGWTAIRFRADNPGVWFMHCHLEVHTT------WGLKMAFIVDNGK 508 (524)
Q Consensus 469 ~g~v~irf~adnpG~w~~HCHil~H~d------~GM~~~~~V~~~~ 508 (524)
|+++.|+|++++||.|+||||+++|++ .|||..+.|....
T Consensus 233 ger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 233 GERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp TCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred CCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999999999999999999998 6899999987644
No 41
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=4.6e-28 Score=241.90 Aligned_cols=241 Identities=16% Similarity=0.171 Sum_probs=158.9
Q ss_pred ceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEE---ecCcccceeEecEEEeCCCc
Q 009854 156 DAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVE---VDAAYVKPFKTETVLIAPGQ 232 (524)
Q Consensus 156 ~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via---~DG~~~~P~~~d~v~l~pge 232 (524)
..+++||+. ..|+|++++|+++|+||+|.. ...+.+|.||. .+.+ .||.+. +....|.|||
T Consensus 24 ~~~~~NG~~---------pGP~I~v~~Gd~v~v~v~N~l-~~~~siH~HG~--~~~~~~~~DGvp~----vtq~~I~PG~ 87 (339)
T 2zwn_A 24 KVFGFNGQV---------PGPLIHVQEGDDVIVNVTNNT-SLPHTIHWHGV--HQKGTWRSDGVPG----VTQQPIEAGD 87 (339)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEEES-SSCBCCEEETC--CCTTCGGGSCCBT----TTBCCBCTTC
T ss_pred EEEEECCcc---------CCCeEEEECCCEEEEEEEECC-CCCccEEeCCC--CcCCCcccCCCCc----cccCccCCCC
Confidence 679999984 128999999999999999999 45566666664 4555 499853 3446799999
Q ss_pred eEEEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCC
Q 009854 233 TTNVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYP 312 (524)
Q Consensus 233 R~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p 312 (524)
|+++.|++++ +|.||+++|.....+ .......+.+........ . ++.
T Consensus 88 ~~~y~f~~~~-~Gt~wyH~H~~~~~q---~~~~Gl~G~liV~p~~~~---~---~~~----------------------- 134 (339)
T 2zwn_A 88 SYTYKFKADR-IGTLWYHCHVNVNEH---VGVRGMWGPLIVDPKQPL---P---IEK----------------------- 134 (339)
T ss_dssp EEEEEEECCS-CEEEEEECCSSHHHH---TTTSCCEEEEEEECSSCC---T---TGG-----------------------
T ss_pred eEEEEEECCC-CEEEEEEecCCchhh---hhcCCceEeEEecCCCcc---c---ccc-----------------------
Confidence 9999999986 699999998532000 110122222322221110 0 000
Q ss_pred CCCCCCcceEEEEEec---cCccCCc--c-ccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCC
Q 009854 313 ARVPLKIDHSLFFTIG---LGINPCA--T-CVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFT 386 (524)
Q Consensus 313 ~~~p~~~~~~~~~~~~---~~~~~~~--~-~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~ 386 (524)
..++++.+.+. ....... . ......-.|.|||+.|
T Consensus 135 -----~~d~e~~l~l~d~~~~~~~~~~~~g~~~~~~~~~~ING~~~---------------------------------- 175 (339)
T 2zwn_A 135 -----RVTKDVIMMMSTWESAVADKYGEGGTPMNVADYFSVNAKSF---------------------------------- 175 (339)
T ss_dssp -----GCSEEEEEEEEEECGGGTTCTTCCCSTTSCCCEEEETTBCT----------------------------------
T ss_pred -----cCCceEEEEeeheecccccccCCCCCCccccceEEEccccC----------------------------------
Confidence 01111111110 0000000 0 0000011255666433
Q ss_pred CCCCCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEe
Q 009854 387 GTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGV 466 (524)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 466 (524)
.....+.++.|++++|+|+|.+ ...||||||||.|+|++.+.. ...+|.++||+.|
T Consensus 176 ----------~~~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~DG~-----------~~~~p~~~dtv~l 231 (339)
T 2zwn_A 176 ----------PLTQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKDGL-----------PLDSPYYADTVLV 231 (339)
T ss_dssp ----------TSSCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEETTE-----------EEEEEEEESEEEE
T ss_pred ----------CCcccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeCCe-----------ecCCCcEEEEEEE
Confidence 0112467889999999999975 458999999999999998422 1224678999999
Q ss_pred cCCcEEEEEEEeCCceeEEEEeechHh------hhccceEEEEEcCCC
Q 009854 467 PSGGWTAIRFRADNPGVWFMHCHLEVH------TTWGLKMAFIVDNGK 508 (524)
Q Consensus 467 pp~g~v~irf~adnpG~w~~HCHil~H------~d~GM~~~~~V~~~~ 508 (524)
+||+++.|+|++++||.|++|||+++| ++.|||+.|.+....
T Consensus 232 ~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 232 SPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp CTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred CCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 999999999999999999999999999 889999999987543
No 42
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=2.7e-28 Score=238.78 Aligned_cols=218 Identities=20% Similarity=0.279 Sum_probs=151.7
Q ss_pred ceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceEEEEEEeCC------------
Q 009854 175 GFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAH------------ 242 (524)
Q Consensus 175 ~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~dv~v~~~~------------ 242 (524)
.|+|+++.|++++++|.|.. .....+|.||..+.- +.||.++. .-.|.|||++...++++.
T Consensus 57 GP~i~~~~GD~v~v~~~N~l-~~~~siH~HG~~~~~-~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~ 129 (299)
T 3t9w_A 57 GPVLEMWEGDTLEIDLVNTT-DRVLSLHPHGVDYDV-NSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEG 129 (299)
T ss_dssp CCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CceEEEECCeEEEEEEEECC-CCCccEEeCCcccCC-ccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCC
Confidence 48999999999999999998 677889999987653 57887541 124789999999998763
Q ss_pred CCCceEEEEeeCCCCCc-cccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCCCCCCCcce
Q 009854 243 ATGKYLVAASPFLDTPA-ILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPARVPLKIDH 321 (524)
Q Consensus 243 ~~g~~~~~~~~~~~~~~-~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~ 321 (524)
.+|.||.++|....... .... ....+.|....... ...|+
T Consensus 130 ~~gt~~YH~H~~~~~~~~~~~~-~GL~G~liV~~~~~--------------------------------------~~~d~ 170 (299)
T 3t9w_A 130 TAGYWHYHDHAMGTEHGTEGVL-KGLYGALVVRRQGD--------------------------------------LLPKR 170 (299)
T ss_dssp CCEEEEEECSSSSSTTCHHHHH-HTCEEEEEEECTTC--------------------------------------CCCSE
T ss_pred CceeEEEecCCcccccchhhhc-ccccceEEEecccc--------------------------------------cCccc
Confidence 34899999985321110 0000 12233333221100 01245
Q ss_pred EEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCCCCCCCCcccCCCceE
Q 009854 322 SLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRI 401 (524)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 401 (524)
++.+.++. |.+|++.+ .....
T Consensus 171 e~~l~~~~---------------~~~Ng~~~--------------------------------------------~~~p~ 191 (299)
T 3t9w_A 171 QFTVVFND---------------MMINNRAH--------------------------------------------HDAPT 191 (299)
T ss_dssp EEEEEEET---------------TEETTCCT--------------------------------------------TCCCE
T ss_pred cceeeeee---------------eeecCccc--------------------------------------------ccccc
Confidence 54443221 44665432 12245
Q ss_pred EEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEE---EEEEe
Q 009854 402 YRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTA---IRFRA 478 (524)
Q Consensus 402 ~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~---irf~a 478 (524)
+.++.|++|+|+|+|.+ ...|||||||+.|+|+..+... .....+.++||+.|.||+... ++|++
T Consensus 192 l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~~---------~~~~~~~~~Dtv~v~PGe~~~~~via~~~ 259 (299)
T 3t9w_A 192 FEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMRT---------SEYDPSPLIDIKDLNPGVSFGFQVIAGEG 259 (299)
T ss_dssp EEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSCC---------STTCCCCEESEEECCTTCEEEEEEETTTT
T ss_pred ceecCCCEEEEEEEecc---ccceeeeEecceEEEEeccccc---------CCcCCCCceeeEEeCCceeEEEEEEEeeC
Confidence 78889999999999965 5689999999999998775322 122345689999999997654 45567
Q ss_pred CCceeEEEEeechHhhhccceEEEEEcCCCC
Q 009854 479 DNPGVWFMHCHLEVHTTWGLKMAFIVDNGKG 509 (524)
Q Consensus 479 dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 509 (524)
+|||.|+|||||++|++.|||++|+|++.+.
T Consensus 260 dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 260 VGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 8999999999999999999999999987654
No 43
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.91 E-value=7.6e-26 Score=222.61 Aligned_cols=237 Identities=14% Similarity=0.085 Sum_probs=136.6
Q ss_pred EEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccc----eeEecEEEeCCCce
Q 009854 158 HTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVK----PFKTETVLIAPGQT 233 (524)
Q Consensus 158 ~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~----P~~~d~v~l~pgeR 233 (524)
.++||.++ |+|++++|+++++||.|.. ...+.||.||..+.. +.||.+.. +...+...|.||||
T Consensus 52 ~~~n~~pG----------P~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~ 119 (306)
T 1sdd_A 52 SRTSGLLG----------PTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQE 119 (306)
T ss_dssp CSSCCSCC----------CCEEEETTCEEEEEEEECS-SSCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCE
T ss_pred cccCCccC----------CEEEEeCCCEEEEEEEECC-CCcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCe
Confidence 45787766 8899999999999999987 678889999888533 57887641 22334578999999
Q ss_pred EEEEEEeCCCC---------CceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccc
Q 009854 234 TNVLLSAAHAT---------GKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLR 304 (524)
Q Consensus 234 ~dv~v~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 304 (524)
++..+++++.+ |+||+++|.....+ ..... ..++|.......... ..+ +.. +.. +..-+.
T Consensus 120 ~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q--~~~GL-~G~liV~~~~~~~~~-~~~--~~~-d~e----~~l~~~ 188 (306)
T 1sdd_A 120 YTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVED--FNSGL-IGPLLICKKGTLTED-GTQ--KMF-EKQ----HVLMFA 188 (306)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHH--HHTTC-CEEEEEECTTCBCTT-SSB--SSS-CCC----CCCBCC
T ss_pred EEEEEEeCCccCCCCCCCCceEEEEeccCCchhh--hccCc-eEEEEEccCCCCCcc-CCc--Ccc-cce----EEEEEE
Confidence 99999997743 69999998421101 01112 234444432111000 000 000 000 000000
Q ss_pred ccCCCCCCCCCCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCcccc
Q 009854 305 SLNSKKYPARVPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYN 384 (524)
Q Consensus 305 ~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~ 384 (524)
. + ....... ......+.|||+.|..
T Consensus 189 d-----------------~--d~~~~~~------~~~~~~~~ING~~~~~------------------------------ 213 (306)
T 1sdd_A 189 V-----------------F--DESKSWN------QTSSLMYTVNGYVNGT------------------------------ 213 (306)
T ss_dssp E-----------------E--ETTSSSS------CCCCEEECSSSCCSSC------------------------------
T ss_pred e-----------------c--ccccccc------cCCCcceeeCCEecCC------------------------------
Confidence 0 0 0000000 0001235566654310
Q ss_pred CCCCCCCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCcee
Q 009854 385 FTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTI 464 (524)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv 464 (524)
.+.+.++.|++++|.|.|.+. ....|+||+||+.|++ .| .++||+
T Consensus 214 --------------~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~----dG----------------~~~dtv 258 (306)
T 1sdd_A 214 --------------MPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ----NH----------------HKISAI 258 (306)
T ss_dssp --------------CCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEE----TT----------------EECSCC
T ss_pred --------------CcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee----CC----------------EEcceE
Confidence 112466789999999999762 1257999999999986 11 258999
Q ss_pred EecCCcEEEEEEEeCCceeEEEEeechHhhhccceEEEEEcCC
Q 009854 465 GVPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVDNG 507 (524)
Q Consensus 465 ~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 507 (524)
.|.||+.+.|+|++++||.|+||||+++|++.|||+.|.|.+.
T Consensus 259 ~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 259 TLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp CEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred EECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 9999999999999999999999999999999999999999764
No 44
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.89 E-value=2e-22 Score=218.54 Aligned_cols=247 Identities=17% Similarity=0.211 Sum_probs=143.7
Q ss_pred ceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccc---e-eEecEEEeCCCceEEEEEEeCCC-----CC
Q 009854 175 GFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVK---P-FKTETVLIAPGQTTNVLLSAAHA-----TG 245 (524)
Q Consensus 175 ~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~---P-~~~d~v~l~pgeR~dv~v~~~~~-----~g 245 (524)
.|+|+++.|+++++||.|.. ...+.||.||.... .+.||.+.. | ..+....|.||++++..+++++. +|
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l-~~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLA-SRPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCS-SSCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECC-CCceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 38999999999999999998 57788999988765 478998632 2 22345689999999999999874 47
Q ss_pred ----ceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCCCCCCCcce
Q 009854 246 ----KYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPARVPLKIDH 321 (524)
Q Consensus 246 ----~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~ 321 (524)
.||.|+|..... .....-..++|........... ..|. .+......+. .+.....-.+. .....
T Consensus 146 ~~c~T~wYHsH~~~~~---q~~~GL~G~lIV~~~~~~~~~~---~~~~-~~~e~~l~l~-~~d~~~~w~~~----~~~~~ 213 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEK---DIHSGLIGPLLICRKGTLDKET---NMPV-DMREFVLLFM-VFDEKKSWYYD----KKPTR 213 (647)
T ss_dssp CSEEEEEEECCSSHHH---HHTTTCEEEEEEECTTSSCTTS---CCCS-SCCEEEEEEE-EEEGGGSSCCC---------
T ss_pred CCceEEEEccCCCCcc---cccccCccCEEEeeCCCccccc---CCCC-cceeEEEEEE-eecCccccccc----cCccc
Confidence 999999963111 1111112333333221110000 0010 1110000000 00000000000 00000
Q ss_pred EEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCCCCCCCCcccCCCceE
Q 009854 322 SLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRI 401 (524)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 401 (524)
.+. ..... . ......+.|||+.|. .+.
T Consensus 214 ~~~-~~~~~------~-~~~~~~~~iNG~~~~---------------------------------------------~p~ 240 (647)
T 1sdd_B 214 SWR-RASSE------V-KNSHEFHAINGMIYN---------------------------------------------LPG 240 (647)
T ss_dssp ------------------CCCEEEEETTBSSC---------------------------------------------CCC
T ss_pred ccc-cCCcc------h-hhcCceeccCCEecC---------------------------------------------CCC
Confidence 000 00000 0 000122445554330 123
Q ss_pred EEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeCCc
Q 009854 402 YRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADNP 481 (524)
Q Consensus 402 ~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp 481 (524)
+.++.|++++|.|.|.+. ....||||+|||.|+|++.+ +.++||+.|.||+++.|+|++++|
T Consensus 241 l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~d-----------------~~~~d~v~l~pg~r~~v~~~~~~p 302 (647)
T 1sdd_B 241 LRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGTQ-----------------QHQLGVWPLLPGSFKTLEMKASKP 302 (647)
T ss_dssp CEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSSS-----------------CEEESSEEECTTEEEEEEEECCSS
T ss_pred eEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecCC-----------------CcccceEEECCCeEEEEEEEeccc
Confidence 567889999999999752 23589999999999998652 347999999999999999999999
Q ss_pred eeEEEEeechHhhhccceEEEEEcC
Q 009854 482 GVWFMHCHLEVHTTWGLKMAFIVDN 506 (524)
Q Consensus 482 G~w~~HCHil~H~d~GM~~~~~V~~ 506 (524)
|.|+||||+++|++.|||+.|.|.+
T Consensus 303 G~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 303 GWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp EEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred eEeecccCcccccccccccceeeec
Confidence 9999999999999999999999964
No 45
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.88 E-value=4.2e-22 Score=197.73 Aligned_cols=250 Identities=16% Similarity=0.133 Sum_probs=159.6
Q ss_pred ceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCC-CeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceE
Q 009854 156 DAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALN-EELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTT 234 (524)
Q Consensus 156 ~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~ 234 (524)
..+++||+. ..|.|++++|++++||++|.... ..+.+|+||.. +.||... ...|.|||++
T Consensus 59 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~ 119 (327)
T 1kbv_A 59 RYWTFDGDV---------PGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTS 119 (327)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEE
T ss_pred EEEEECCcc---------CCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEE
Confidence 579999984 23899999999999999999743 58899999864 5788642 2248999999
Q ss_pred EEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCCC
Q 009854 235 NVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPAR 314 (524)
Q Consensus 235 dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~ 314 (524)
++.+++++ +|.||+|||...... .... ...+.+.+.... . +|..+... .. -+.+..... .
T Consensus 120 ~y~f~~~~-~Gt~wyH~h~~~~~~--~~~~-Gl~G~~iV~~~~-----~---~p~~d~e~-~l----~~~d~~~~~---~ 179 (327)
T 1kbv_A 120 TFSFKALQ-PGLYIYHCAVAPVGM--HIAN-GMYGLILVEPKE-----G---LPKVDKEF-YI----VQGDFYTKG---K 179 (327)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHH--HHHT-TCEEEEEEECTT-----C---CCCCSEEE-EE----EEEEECBSS---C
T ss_pred EEEEECCC-CeEEEEEeCCCChhh--hhhc-ceEEEEEEecCC-----C---CCCCceEE-EE----EeeeeeccC---c
Confidence 99999987 699999998532100 0111 222333333221 0 11111100 00 000000000 0
Q ss_pred CCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCCCCCCCCcc
Q 009854 315 VPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQ 394 (524)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 394 (524)
. . ...... ..+.. ......-.+.+||+.+..
T Consensus 180 ~-~-~~g~~~--~~~~~-----~~~~~~~~~~iNG~~~~~---------------------------------------- 210 (327)
T 1kbv_A 180 K-G-AQGLQP--FDMDK-----AVAEQPEYVVFNGHVGAL---------------------------------------- 210 (327)
T ss_dssp T-T-CCEEEC--BCHHH-----HHHTCCSEEEETTSTTTT----------------------------------------
T ss_pred c-c-cccccc--cChhH-----hccCCCceEEEcCcccCC----------------------------------------
Confidence 0 0 000000 00000 000000124455543300
Q ss_pred cCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEE
Q 009854 395 TNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAI 474 (524)
Q Consensus 395 ~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~i 474 (524)
.....+.++.|++++|.|.|.+ ....|+||+|||.|+|++...+ +..|.++|++.|.||+.+.|
T Consensus 211 --~~~~~l~v~~G~~vRlRliN~~--~~~~~~~~l~Gh~f~vi~~DG~------------~~~p~~~d~l~l~pGer~dv 274 (327)
T 1kbv_A 211 --TGDNALKAKAGETVRMYVGNGG--PNLVSSFHVIGEIFDKVYVEGG------------KLINENVQSTIVPAGGSAIV 274 (327)
T ss_dssp --SGGGCEEEETTEEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGS------------SCEECSBSEEEECTTEEEEE
T ss_pred --CCceeEEeCCCCEEEEEEECCC--CCCceeEEEeCCEEEEEEcCCC------------cCCCCceeEEEECCCCEEEE
Confidence 0113468889999999999965 3468999999999999998533 12367899999999999999
Q ss_pred EEEeCCceeEEEEeechHhh-hccceEEEEEcCCCC
Q 009854 475 RFRADNPGVWFMHCHLEVHT-TWGLKMAFIVDNGKG 509 (524)
Q Consensus 475 rf~adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~ 509 (524)
.|++++||.|.+|||+++|. ..||++.|.|.....
T Consensus 275 ~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 275 EFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 310 (327)
T ss_dssp EEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred EEEeCCCeEEEEEeccccccccCCcEEEEEECCCCC
Confidence 99999999999999999995 899999999987654
No 46
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.88 E-value=1.3e-21 Score=195.92 Aligned_cols=245 Identities=17% Similarity=0.177 Sum_probs=151.8
Q ss_pred CceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCC-CCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCce
Q 009854 155 SDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAAL-NEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQT 233 (524)
Q Consensus 155 ~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~-~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR 233 (524)
...+++||+. ..|.|++++|+++|+|++|... ...|.+++++... +.||..+ . .|.|||+
T Consensus 59 ~~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~---~----~i~PG~~ 119 (340)
T 2bw4_A 59 IHAMTFNGSV---------PGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL---T----QVNPGEE 119 (340)
T ss_dssp EEEEEETTBS---------SCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG---C----CBCTTEE
T ss_pred EEEEEECCCC---------CCCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc---e----EeCCCCE
Confidence 3679999984 2389999999999999999973 4678888888653 2334322 1 3999999
Q ss_pred EEEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCC
Q 009854 234 TNVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPA 313 (524)
Q Consensus 234 ~dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~ 313 (524)
+++.+++++ +|.||++||............. ..+++......... ..+ .|
T Consensus 120 ~~y~~~~~~-~Gt~wyH~h~~~~~~~~~~~Gl-~G~~iV~~~~~~~~--~~~-~p------------------------- 169 (340)
T 2bw4_A 120 TTLRFKATK-PGVFVYHCAPEGMVPWHVTSGM-NGAIMVLPRDGLKD--EKG-QP------------------------- 169 (340)
T ss_dssp EEEEEECCS-CEEEEEECCCTTCHHHHHHTTC-EEEEEEECTBCEEC--TTS-CE-------------------------
T ss_pred EEEEEECCC-CeEEEEEcCCCCchhhHHhCcC-EEEEEEccCcCccc--ccC-CC-------------------------
Confidence 999999987 7999999995311000001111 12233322110000 000 00
Q ss_pred CCCCCcceEEEEEec-cCc--cCCc-----------------cccCCceEEEEecCeeeecCcchhhhhhhccccccccC
Q 009854 314 RVPLKIDHSLFFTIG-LGI--NPCA-----------------TCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTD 373 (524)
Q Consensus 314 ~~p~~~~~~~~~~~~-~~~--~~~~-----------------~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~ 373 (524)
...++.+.+.+. ... .... .........+.|||+.|..
T Consensus 170 ---~~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~------------------- 227 (340)
T 2bw4_A 170 ---LTYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGAL------------------- 227 (340)
T ss_dssp ---ECCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHHHHTTCCSEEEETTSTTTT-------------------
T ss_pred ---cCcceeEEEeeeeeeeccccCCcccccccccccccchhhHhhcCCCCEEEECCccCCc-------------------
Confidence 001111111100 000 0000 0000000124455443210
Q ss_pred CCCCCCCccccCCCCCCCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCC
Q 009854 374 DFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKF 453 (524)
Q Consensus 374 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~ 453 (524)
.....+.++.|++++|++.|.+ ...|++|+|||.|+|+.. |.+
T Consensus 228 -----------------------~~~~~l~v~~G~r~Rl~n~~~~---~~~~~~~i~gh~~~Vi~d--G~~--------- 270 (340)
T 2bw4_A 228 -----------------------TGDHALTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWAT--GKF--------- 270 (340)
T ss_dssp -----------------------SGGGCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCT---------
T ss_pred -----------------------cCCCceEcCCCCEEEEEECCCC---CccceEEecCcceEEeCC--Ccc---------
Confidence 0124578889999998877643 557899999999999963 322
Q ss_pred CCCCCC--cCceeEecCCcEEEEEEEeCCceeEEEEeech-HhhhccceEEEEEcCCCC
Q 009854 454 NLVDPV--ERNTIGVPSGGWTAIRFRADNPGVWFMHCHLE-VHTTWGLKMAFIVDNGKG 509 (524)
Q Consensus 454 ~~~~p~--~rDTv~vpp~g~v~irf~adnpG~w~~HCHil-~H~d~GM~~~~~V~~~~~ 509 (524)
.++. ++||+.|.+|+.+.|.|++++||.|+||||++ +|++.|||+.|.|.....
T Consensus 271 --~~~p~~~~dtv~l~pGer~~v~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 271 --RNPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp --TSCCEEEESCCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred --cCCccccceEEEeCCCceEEEEEECCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 1222 47999999999999999999999999999999 599999999999987665
No 47
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.85 E-value=1.5e-22 Score=220.62 Aligned_cols=228 Identities=13% Similarity=0.151 Sum_probs=148.7
Q ss_pred CceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceEEEEEEeCC---------CC
Q 009854 174 GGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAH---------AT 244 (524)
Q Consensus 174 ~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~dv~v~~~~---------~~ 244 (524)
..|+|+++.|++++++|.|.. ...+.||.||..+....-||.+- ....|.||++++..+.+++ .+
T Consensus 197 pGP~Ir~~~GD~v~v~~~N~l-~~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~ 270 (770)
T 2r7e_B 197 LGPYIRAEVEDNIMVTFRNQA-SRPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDC 270 (770)
T ss_dssp CCCCCCCCSSSCEEEEEECCS-SSCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSE
T ss_pred CCCeEEEEcCCEEEEEEEECC-CCCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCC
Confidence 458999999999999999998 67888999998776555468642 2246899999999999884 46
Q ss_pred CceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCCCCCCCcceEEE
Q 009854 245 GKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPARVPLKIDHSLF 324 (524)
Q Consensus 245 g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~ 324 (524)
|.||.++|.....+ .. ....+.|.+.......... .+.. .++.+.
T Consensus 271 Gt~wYHsh~~~~~q---~~-~GL~G~liV~~~~~~~~~~---~~~~----------------------------~d~E~v 315 (770)
T 2r7e_B 271 KAWAYSSDVDLEKD---VH-SGLIGPLLVCHTNTLNPAH---GRQV----------------------------TVQEFA 315 (770)
T ss_dssp EEEEECCCSSSSHH---HH-TSCCEEEEEECSTTSCSSS---CCCC----------------------------SSEEEE
T ss_pred eeEEeeccCCcHHH---Hh-CCceeeEEECCCccccccc---CCCc----------------------------cceEEE
Confidence 89999998532101 11 1223333333221110000 0000 011111
Q ss_pred EEecc-Ccc---------------------CCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCcc
Q 009854 325 FTIGL-GIN---------------------PCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVT 382 (524)
Q Consensus 325 ~~~~~-~~~---------------------~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~ 382 (524)
+.+.. ... ....+... ...+.|||+.|
T Consensus 316 l~~~~~de~~swy~~~~~~~~~~~p~~~~~~d~~~~~~-~~~~~ING~~~------------------------------ 364 (770)
T 2r7e_B 316 LFFTIFDETKSWYFTENMERNCRAPCNIQMEDPTFKEN-YRFHAINGYIM------------------------------ 364 (770)
T ss_dssp CCCCEECCSSSSCTTGGGSSCSCCSSCCCSSSSSSTTT-SCEECTTSCTT------------------------------
T ss_pred EEEeecCccccchhccchhhcccCccccccCCcccccc-CCccccCCccC------------------------------
Confidence 10000 000 00000000 00123333221
Q ss_pred ccCCCCCCCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCc
Q 009854 383 YNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERN 462 (524)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rD 462 (524)
.....+.++.|++++|.|+|.+. ....||||||||.|+|++.+ +.++|
T Consensus 365 --------------~~~~~l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-----------------g~~~D 412 (770)
T 2r7e_B 365 --------------DTLPGLVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-----------------EYKMA 412 (770)
T ss_dssp --------------TTCCCCCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-----------------CCEES
T ss_pred --------------CCCCCeEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-----------------Cceee
Confidence 12234678899999999999752 23589999999999999763 12799
Q ss_pred eeEecCCcEEEEEEEeCCceeEEEEeechHhhhccceEEEEEc
Q 009854 463 TIGVPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 463 Tv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
|+.|.||+++.|+|++++||.|+||||+++|++.|||..|.|.
T Consensus 413 tv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 413 LYNLYPGVFETVEMLPSKAGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp EEECCTTCCCEEEECCSSCBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred EEEECCCeEEEEEEEeCCCCceEEEeccccccccccccccccc
Confidence 9999999999999999999999999999999999999999884
No 48
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.85 E-value=7.4e-20 Score=182.44 Aligned_cols=95 Identities=17% Similarity=0.211 Sum_probs=74.1
Q ss_pred eEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCC-cCceeEecCCcEEEEEEEe
Q 009854 400 RIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPV-ERNTIGVPSGGWTAIRFRA 478 (524)
Q Consensus 400 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~-~rDTv~vpp~g~v~irf~a 478 (524)
..+.++.|++++|++.|.+ ...|++++|+|.|.|++. |.+- ..|. ++||+.|.||+.+.|.|++
T Consensus 225 ~~l~v~~Ger~Rl~n~~~~---~~~~~h~i~~h~~~Vi~d--G~~~----------~~p~~~~dtv~l~pGer~~v~v~a 289 (333)
T 1mzy_A 225 GALKAKVGDNVLFVHSQPN---RDSRPHLIGGHGDLVWET--GKFH----------NAPERDLETWFIRGGTAGAALYKF 289 (333)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCTT----------SCCEEEESBCCBCTTEEEEEEEEC
T ss_pred cceEecCCCEEEEEECCCC---CccccEEECCCCeEEEeC--Cccc----------CCCccCcceEEECCCceEEEEEEc
Confidence 3468889999998777632 223444467788888873 3221 1122 5899999999999999999
Q ss_pred CCceeEEEEeechHhh-hccceEEEEEcCCCC
Q 009854 479 DNPGVWFMHCHLEVHT-TWGLKMAFIVDNGKG 509 (524)
Q Consensus 479 dnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~ 509 (524)
++||.|+||||++.|+ +.|||+.|.|.....
T Consensus 290 ~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 290 LQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp CSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred CCCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 9999999999999997 999999999987654
No 49
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.82 E-value=6.8e-19 Score=175.79 Aligned_cols=255 Identities=19% Similarity=0.214 Sum_probs=156.4
Q ss_pred ceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCC-CCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceE
Q 009854 156 DAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAAL-NEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTT 234 (524)
Q Consensus 156 ~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~-~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~ 234 (524)
..+++||+. ..|+|++++|+++++|+.|... ...|.+++|++.. .||.. +. . .|.||+++
T Consensus 54 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~~--~--~i~pG~~~ 114 (336)
T 1oe1_A 54 QAMTFNGSM---------PGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--KL--T--NVNPGEQA 114 (336)
T ss_dssp EEEEETTBS---------SCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--GG--C--CBCTTEEE
T ss_pred EEEEECCcc---------CCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--ce--E--EeCCCCEE
Confidence 679999984 2389999999999999999974 3678899999763 24432 11 1 39999999
Q ss_pred EEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCCC
Q 009854 235 NVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPAR 314 (524)
Q Consensus 235 dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~ 314 (524)
++.+++++ +|.||++||.......... ....+.+.......... ..+
T Consensus 115 ~y~f~~~~-~Gt~~yH~h~~~~~~~~~~--~Gl~G~liV~~~~~~~~-~~~----------------------------- 161 (336)
T 1oe1_A 115 TLRFKADR-SGTFVYHCAPEGMVPWHVV--SGMSGTLMVLPRDGLKD-PQG----------------------------- 161 (336)
T ss_dssp EEEEECCS-CEEEEEECCCTTCHHHHHH--TTCEEEEEEECTTCCBC-TTS-----------------------------
T ss_pred EEEEECCC-CeEEEEecCCCCchhHHHh--CCCeEEEEEecCcCCcc-ccc-----------------------------
Confidence 99999987 7999999995321000001 12233333322111000 000
Q ss_pred CCCCcceEEEEEec-cCccCCccccCC----------------------ceEEEEecCeeeecCcchhhhhhhccccccc
Q 009854 315 VPLKIDHSLFFTIG-LGINPCATCVNG----------------------SRVVADINNVTFVMPTISLLQAHFFKIGGVF 371 (524)
Q Consensus 315 ~p~~~~~~~~~~~~-~~~~~~~~~~~~----------------------~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~ 371 (524)
.+...|+.+.+.+. .-... ...| ....+.|||+.+.
T Consensus 162 ~~~~~D~e~~l~~~D~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~------------------ 220 (336)
T 1oe1_A 162 KPLHYDRAYTIGEFDLYIPK---GPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGA------------------ 220 (336)
T ss_dssp CBCCCSEEEEEEEEEECCCB---CTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTT------------------
T ss_pred CcccCCceeEeeeeeeeecc---ccCCceeecccccccccchhhHhhcCCCCEEEECCeecc------------------
Confidence 01112333322110 00000 0000 0001223322110
Q ss_pred cCCCCCCCCccccCCCCCCCCcccCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCC
Q 009854 372 TDDFPGNPPVTYNFTGTQPANFQTNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPK 451 (524)
Q Consensus 372 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~ 451 (524)
..+...+.++.|++++|+..+.+ ...+++++|||.|.|+. .|.+
T Consensus 221 ------------------------~~~~~~l~v~~GervRlin~~~~---~~~~~~~i~gh~~~Vi~--DG~~------- 264 (336)
T 1oe1_A 221 ------------------------LTGANALTAKVGETVLLIHSQAN---RDTRPHLIGGHGDWVWE--TGKF------- 264 (336)
T ss_dssp ------------------------TSGGGCEEEETTCEEEEEEEESS---SCBCEEETTCCEEEEET--TCCT-------
T ss_pred ------------------------CCCCcceEcCCCCEEEEEecCCC---CccceEEECCcCceEeC--CCcC-------
Confidence 00124578889999998655532 34466667999999996 3322
Q ss_pred CCCCCCCC--cCceeEecCCcEEEEEEEeCCceeEEEEeechHhh-hccceEEEEEcCCCCCC-CCCCCCCCCCCC
Q 009854 452 KFNLVDPV--ERNTIGVPSGGWTAIRFRADNPGVWFMHCHLEVHT-TWGLKMAFIVDNGKGPN-ESLLPPPSDLPK 523 (524)
Q Consensus 452 ~~~~~~p~--~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~~~-~~~~~~p~~~p~ 523 (524)
.+|. +.||+.|++|+.+.+.+++++||.|+||||.+.|. +.||++.|.|++...+. -.....|..+|+
T Consensus 265 ----~~p~~~~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~~~~~~~~~~~~~~~~ 336 (336)
T 1oe1_A 265 ----ANPPQRDLETWFIRGGSAGAALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWNDDLMKQIKAPAPIPR 336 (336)
T ss_dssp ----TSCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCTTTCCCSSCSCCCCC
T ss_pred ----cCCccccceEEEECCCCcEEEEEEcCCCceEEEEechhhccccCCCeEEEEECCCCChHHhccCCCCCCCCC
Confidence 2222 46999999999999999999999999999999986 99999999998776644 244556666653
No 50
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.81 E-value=2.3e-19 Score=186.13 Aligned_cols=250 Identities=14% Similarity=0.124 Sum_probs=159.8
Q ss_pred ceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCC-CCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceE
Q 009854 156 DAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAAL-NEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTT 234 (524)
Q Consensus 156 ~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~-~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~ 234 (524)
..+++||+. ..|.|+++.|++++|||.|... ...+.+|+||+. ..||... +..|.||+++
T Consensus 49 ~~~~~ng~~---------pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~ 109 (442)
T 2zoo_A 49 VFWSFGETV---------PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTS 109 (442)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEE
T ss_pred EEEEECCcC---------CCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEE
Confidence 679999986 2389999999999999999964 368999999975 3687632 2358999999
Q ss_pred EEEEEeCCCCCceEEEEeeCCCCCccccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCCC
Q 009854 235 NVLLSAAHATGKYLVAASPFLDTPAILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPAR 314 (524)
Q Consensus 235 dv~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~ 314 (524)
++.|++++ +|.||++||...... .. .....+.+.+..... +|..+ .. +.--+.+..... .
T Consensus 110 ~y~f~~~~-~Gt~~yH~H~~~~~~--~~-~~Gl~G~~iv~~~~~--------~~~~d-~e----~~l~l~d~~~~~---~ 169 (442)
T 2zoo_A 110 TFNFKALN-PGLYIYHCATAPVGM--HI-ANGMYGLILVEPKEG--------LAPVD-RE----YYLVQGDFYTKG---E 169 (442)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHH--HH-HTTCEEEEEEECTTC--------CCCCS-EE----EEEEEEEECBSS---C
T ss_pred EEEEEcCC-CeEEEEecCCCChHH--HH-hCccEEEEEEeCCCC--------CCCCC-ce----EEEEeeeeeccC---c
Confidence 99999987 799999997421100 00 012334444432211 11111 00 000010000000 0
Q ss_pred CCCCcceEEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCCCCCCCCcc
Q 009854 315 VPLKIDHSLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQ 394 (524)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 394 (524)
. . ..... ...+.. ......-.+.|||+.+..
T Consensus 170 ~-~-~~~~~--~~~~~~-----~~~~~~~~~liNG~~~~~---------------------------------------- 200 (442)
T 2zoo_A 170 F-G-EAGLQ--PFDMAK-----AIDEDADYVVFNGSVGST---------------------------------------- 200 (442)
T ss_dssp T-T-CCEEE--CBCHHH-----HHTTCCSEEEETTSTTTT----------------------------------------
T ss_pred c-c-ccccc--cCChhH-----hccCCCCEEEECCCcCCC----------------------------------------
Confidence 0 0 00000 000000 000001123455543200
Q ss_pred cCCCceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEE
Q 009854 395 TNNGTRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAI 474 (524)
Q Consensus 395 ~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~i 474 (524)
.....+.++.|++++|.|.|.+ ....|+||+||+.|.|++...+ ...|.+.|++.|.||+...|
T Consensus 201 --~~~~~l~v~~G~~vrlrliN~~--~~~~~~~~i~g~~~~vi~~DG~------------~~~p~~~~~~~l~pg~r~~v 264 (442)
T 2zoo_A 201 --TDENSLTAKVGETVRLYIGNGG--PNLVSSFHVIGEIFDTVYVEGG------------SLKNHNVQTTLIPAGGAAIV 264 (442)
T ss_dssp --SGGGCEEEETTCEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGS------------SCEECSBSEEEECTTEEEEE
T ss_pred --CCCCceEeCCCCEEEEEEEeCC--CCCceeeEEcCCEEEEEecCCc------------cCCCccceEEEECCCeeEEE
Confidence 0012467889999999999965 2468999999999999988532 12267899999999999999
Q ss_pred EEEeCCceeEEEEeechHh-hhccceEEEEEcCCCC
Q 009854 475 RFRADNPGVWFMHCHLEVH-TTWGLKMAFIVDNGKG 509 (524)
Q Consensus 475 rf~adnpG~w~~HCHil~H-~d~GM~~~~~V~~~~~ 509 (524)
.|+++.+|.|++|||.+.| .+.||++.|.|.....
T Consensus 265 ~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 265 EFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 9999999999999999999 5999999999987654
No 51
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.80 E-value=1.7e-18 Score=179.24 Aligned_cols=208 Identities=14% Similarity=0.148 Sum_probs=146.8
Q ss_pred CCccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC-CCceEEe-cCccccCCCCCCCCCc-----cccccCCCCCceEE
Q 009854 7 LCSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-YNVSIHW-HGVRQLRTCWADGPAY-----ITQCPIQPGQNYIY 79 (524)
Q Consensus 7 ~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~~iH~-HG~~~~~~~~~DG~~~-----~~q~~i~PG~~~~y 79 (524)
.|.....+++||+. .|+|+|++| ++|+||.|... ....+|+ ||....... .||.+. ++...|.||||+++
T Consensus 178 ~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~-~DG~~~~~P~~~~~l~l~pgeR~dv 254 (451)
T 2uxt_A 178 GGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS-GDQGFLPAPVSVKQLSLAPGERREI 254 (451)
T ss_dssp SCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE-CSSSEEEEEEEESSEEECTTCEEEE
T ss_pred CCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE-eCCCccCCceEeceEEECceeEEEE
Confidence 45667899999997 599999999 99999999985 4677999 897765443 899642 45678999999999
Q ss_pred EEEeCCcccceeeccChHHHHhhc-e-----------eeEE-EcCCCCC---CCCCCC-----------CCccEEEEece
Q 009854 80 NFTLAGQRGTLWWHAHILWLRATV-H-----------GAIV-ILPKRGV---PYPFPK-----------PHKEVTVILSE 132 (524)
Q Consensus 80 ~~~~~~~~Gt~wyH~H~~~~~~Gl-~-----------G~~i-V~~~~~~---~~~~~~-----------~~~e~~l~~~d 132 (524)
.+++ .+.|+||++++......|+ . .+++ ....... ...++. .+.+..+.++
T Consensus 255 lv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~p~~L~~~~~~~~~~~~~~~~~l~- 332 (451)
T 2uxt_A 255 LVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRDISLG- 332 (451)
T ss_dssp EEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----CCCSCSSSSCCCCCCCSEEEEEEEC-
T ss_pred EEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccccCccccCCCCCCCCCCcceEEEEEe-
Confidence 9998 5689999998865432221 0 1111 1111000 000000 0000111110
Q ss_pred eecccHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEE
Q 009854 133 WWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVE 212 (524)
Q Consensus 133 ~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via 212 (524)
..|+|||+.+.. ..+.+.++.|++++|+|+|. ..|+||||||.|+|++
T Consensus 333 -----------------------~~~~iNg~~f~~------~~~~~~~~~G~~~~~~l~N~---~~HP~HLHGh~F~Vl~ 380 (451)
T 2uxt_A 333 -----------------------DDPGINGQLWDV------NRIDVTAQQGTWERWTVRAD---EPQAFHIEGVMFQIRN 380 (451)
T ss_dssp -----------------------SSSSBTTBCCCT------TCCCEEEETTCEEEEEEEEE---EEEEEEETTCEEEEEE
T ss_pred -----------------------eEEEECCEeCCC------CCCcEEcCCCCEEEEEEECC---CCcCeEECCceEEEEe
Confidence 036789998632 23568999999999999998 5899999999999999
Q ss_pred ecCccc---ceeEecEEEeCCCceEEEEEEeCCCCCc----eEEEEeeC
Q 009854 213 VDAAYV---KPFKTETVLIAPGQTTNVLLSAAHATGK----YLVAASPF 254 (524)
Q Consensus 213 ~DG~~~---~P~~~d~v~l~pgeR~dv~v~~~~~~g~----~~~~~~~~ 254 (524)
.||... .|.+.|+|.| |+++.|.|++++ ||. |++|||..
T Consensus 381 ~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dn-pg~~~g~w~~HCHil 426 (451)
T 2uxt_A 381 VNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQ-PSWAHFPFYFNSQTL 426 (451)
T ss_dssp ETTBCCCGGGSSCBSEEEE--EEEEEEEEECCS-CCBTTBCEEEEESSH
T ss_pred eCCcCCCcccCCCccEEEE--CCEEEEEEEeCC-CCCCCCceEEeCCch
Confidence 999865 4788999999 999999999987 465 99999964
No 52
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.79 E-value=1.9e-18 Score=178.47 Aligned_cols=213 Identities=16% Similarity=0.217 Sum_probs=156.6
Q ss_pred CccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCc-----cccccCCCCCceEEEE
Q 009854 8 CSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-YNVSIHWHGVRQLRTCWADGPAY-----ITQCPIQPGQNYIYNF 81 (524)
Q Consensus 8 g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~-----~~q~~i~PG~~~~y~~ 81 (524)
|.....+++||+. .|.|+|++| ++|+||.|... ....+|++|....... .||.+. +....|.||||++..+
T Consensus 174 g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~-~DG~~~~~p~~~~~l~l~pgeR~dv~v 250 (439)
T 2xu9_A 174 GKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIA-ADGGFLEEPLEVSELLLAPGERAEVLV 250 (439)
T ss_dssp CCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEEESCEEECTTCEEEEEE
T ss_pred CCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEe-cCCCCCCCceEeceEEECCceeEEEEE
Confidence 5567889999997 599999999 99999999985 4678999998766543 799652 3456789999999999
Q ss_pred EeCCcccceeeccChHHHH----hhc--------------eee--EEEcCCCCCCCCCCCC------------CccEEEE
Q 009854 82 TLAGQRGTLWWHAHILWLR----ATV--------------HGA--IVILPKRGVPYPFPKP------------HKEVTVI 129 (524)
Q Consensus 82 ~~~~~~Gt~wyH~H~~~~~----~Gl--------------~G~--~iV~~~~~~~~~~~~~------------~~e~~l~ 129 (524)
++ +++|.||++++..... .|| ... +.+..... ..+++.. ++++.+.
T Consensus 251 ~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~p~~l~~~~~l~~~~~~r~~~l~ 328 (439)
T 2xu9_A 251 RL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK-PLPLPKALSPFPTLPAPVVTRRLVLT 328 (439)
T ss_dssp EC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC-CCCCCSCCCCCCCCCCCSEEEEEEEE
T ss_pred Ec-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCc-cccCcccCCCcccCCCCCcceEEEEE
Confidence 98 5599999999742110 122 111 22222211 1111110 0111111
Q ss_pred eceeecccHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceee
Q 009854 130 LSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLT 209 (524)
Q Consensus 130 ~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~ 209 (524)
+.. .+..++|||+.+.. ..+.+.++.|++++|+|.|.+ ...|+||||||.|+
T Consensus 329 ~~~---------------------~g~~~~iNg~~~~~------~~~~~~~~~g~~~~~~~~N~~-~~~HP~HLHG~~F~ 380 (439)
T 2xu9_A 329 EDM---------------------MAARFFINGQVFDH------RRVDLKGQAQTVEVWEVENQG-DMDHPFHLHVHPFQ 380 (439)
T ss_dssp EEG---------------------GGTEEEETTBCCCT------TCCCEEECTTCEEEEEEEECS-SSCEEEEESSCCBE
T ss_pred eec---------------------cCceEeECCEECCC------CCCceecCCCCEEEEEEEcCC-CCCCCceeCCCcEE
Confidence 110 01368999998631 224589999999999999998 68999999999999
Q ss_pred EEEecCccc-ceeEecEEEeCCCceEEEEEEeCCCCCceEEEEeeC
Q 009854 210 VVEVDAAYV-KPFKTETVLIAPGQTTNVLLSAAHATGKYLVAASPF 254 (524)
Q Consensus 210 via~DG~~~-~P~~~d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~~ 254 (524)
|++.+|... .|.+.||+.|.||+++.+.|++++ ||.|.+|||..
T Consensus 381 Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adn-pG~w~~HCHil 425 (439)
T 2xu9_A 381 VLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLRE-KGRTVFHCHIV 425 (439)
T ss_dssp EEEETTEECSSCCCBSEEEECTTCEEEEEEECCS-CEEEEEEESSH
T ss_pred EEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCC-CCCEEEECCcc
Confidence 999999876 588899999999999999999887 69999999963
No 53
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.73 E-value=1.9e-16 Score=166.10 Aligned_cols=240 Identities=16% Similarity=0.169 Sum_probs=155.3
Q ss_pred ccEEEEcCcCC--------CcEEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCc----cccccCCCCCce
Q 009854 11 KPIVTVNGYFP--------GPTIVAREDDTVLVKVVNHVK-YNVSIHWHGVRQLRTCWADGPAY----ITQCPIQPGQNY 77 (524)
Q Consensus 11 ~~~~~~NG~~p--------gP~i~~~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~~q~~i~PG~~~ 77 (524)
...+++||+.. .|+|+|++|+++|+||.|... ....+|++|....... .||.+. +....|.||||+
T Consensus 165 ~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~ 243 (503)
T 1hfu_A 165 PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE-VDGELTEPHTVDRLQIFTGQRY 243 (503)
T ss_dssp CSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCEE
T ss_pred CCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-ccCccccccccCeEEEcccceE
Confidence 46789999863 289999999999999999985 4578999998766543 798542 334568999999
Q ss_pred EEEEEeCCcccceeeccChHH--------HHhhceeeEEEcCCCCCCCCCCCCCccEEEEeceeecccH--HHHHH----
Q 009854 78 IYNFTLAGQRGTLWWHAHILW--------LRATVHGAIVILPKRGVPYPFPKPHKEVTVILSEWWKSDV--EAVIN---- 143 (524)
Q Consensus 78 ~y~~~~~~~~Gt~wyH~H~~~--------~~~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~--~~~~~---- 143 (524)
+..+++++.+|.||.+++... ...++..+++.........+........ ..+.+...... .....
T Consensus 244 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~-~~l~~~~l~p~~~~~~p~~~~~ 322 (503)
T 1hfu_A 244 SFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP-AQLNEADLHALIDPAAPGIPTP 322 (503)
T ss_dssp EEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-CBCCGGGCBBSSSCSCSSCSST
T ss_pred EEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-CCCccccccccCccCCCCcccC
Confidence 999999656799999987431 1133433444332211110100000000 00000000000 00000
Q ss_pred -H---HHhcCCCCCCCceEEEcCCCCCCCCC-------C--------CCCceeEEEecCCEEEEEEEecCCCCeEEEEEc
Q 009854 144 -E---ALKSGLAPNVSDAHTINGHPGPLSSC-------P--------SQGGFKLPVESGKTYMLRLINAALNEELFFKIA 204 (524)
Q Consensus 144 -~---~~~~g~~~~~~~~~~iNG~~~~~~~~-------~--------~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~ 204 (524)
. ....... ..+..|+|||+.+..-.- + ......++++.|++++++++|......|+||||
T Consensus 323 ~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLH 401 (503)
T 1hfu_A 323 GAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLH 401 (503)
T ss_dssp TCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEET
T ss_pred CcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEe
Confidence 0 0000000 011268899998632110 0 012357899999999999995444679999999
Q ss_pred CceeeEEEecCccc----ceeEecEEEe-CCCceEEEEEEeCCCCCceEEEEeeC
Q 009854 205 GHKLTVVEVDAAYV----KPFKTETVLI-APGQTTNVLLSAAHATGKYLVAASPF 254 (524)
Q Consensus 205 gh~~~via~DG~~~----~P~~~d~v~l-~pgeR~dv~v~~~~~~g~~~~~~~~~ 254 (524)
||.|+|++.+|... .|...||+.| .||+++.|.|++++ ||.|.+|||..
T Consensus 402 Gh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adn-PG~W~~HCHil 455 (503)
T 1hfu_A 402 GHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN-PGPWFFHCHIE 455 (503)
T ss_dssp TCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCS-CEEEEEEESSH
T ss_pred cceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCC-CeeeeEecCch
Confidence 99999999999752 5889999999 79999999999997 69999999963
No 54
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.73 E-value=1.8e-16 Score=166.87 Aligned_cols=223 Identities=17% Similarity=0.254 Sum_probs=155.2
Q ss_pred cccEEEEcCcCC---------CcEEEEecCCEEEEEEEeCCCC-CceEEecCccccCCCCCCCCCc----cccccCCCCC
Q 009854 10 TKPIVTVNGYFP---------GPTIVAREDDTVLVKVVNHVKY-NVSIHWHGVRQLRTCWADGPAY----ITQCPIQPGQ 75 (524)
Q Consensus 10 ~~~~~~~NG~~p---------gP~i~~~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~~~~~~DG~~~----~~q~~i~PG~ 75 (524)
....+++||+.. -|+|+|++|+++|+||.|.... ...+|++|....... .||.+. +....|.|||
T Consensus 190 ~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgq 268 (521)
T 1v10_A 190 APDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQ 268 (521)
T ss_dssp CCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTC
T ss_pred CCCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccc
Confidence 356899999853 1899999999999999999854 578999998766543 798542 3456789999
Q ss_pred ceEEEEEeCCcccceeeccChHH----HHhhceeeEEEcCCCCCCCCCCCC--------------------------Ccc
Q 009854 76 NYIYNFTLAGQRGTLWWHAHILW----LRATVHGAIVILPKRGVPYPFPKP--------------------------HKE 125 (524)
Q Consensus 76 ~~~y~~~~~~~~Gt~wyH~H~~~----~~~Gl~G~~iV~~~~~~~~~~~~~--------------------------~~e 125 (524)
|++..+++++.+|.||.+++... ...|+..+++.........+.... .++
T Consensus 269 R~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~ 348 (521)
T 1v10_A 269 RYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTALNEANLIPLINPGAPGNPVPGGAD 348 (521)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCCCSCBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred eEEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCCcccccchhhcccCCcccCCCcccCCcce
Confidence 99999999656799999987542 113443344433221111010000 001
Q ss_pred EEEEeceeecccHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCC---------------CCCCceeEEEecCCEEEEEE
Q 009854 126 VTVILSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSC---------------PSQGGFKLPVESGKTYMLRL 190 (524)
Q Consensus 126 ~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~---------------~~~~~p~~~v~~G~~~rlRl 190 (524)
+.+.++ .+... ....|+|||+.+..... -....+.++++.|++++|++
T Consensus 349 ~~~~l~----------------~~~~~-~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l 411 (521)
T 1v10_A 349 INLNLR----------------IGRNA-TTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISI 411 (521)
T ss_dssp EEEECC----------------EECCS-SSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEE
T ss_pred EEEEEE----------------EecCC-ceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEE
Confidence 111110 00000 01257899998632110 00123578999999999999
Q ss_pred EecCCCCeEEEEEcCceeeEEEecCcc----cceeEecEEEe-CCCceEEEEEEeCCCCCceEEEEeeC
Q 009854 191 INAALNEELFFKIAGHKLTVVEVDAAY----VKPFKTETVLI-APGQTTNVLLSAAHATGKYLVAASPF 254 (524)
Q Consensus 191 iN~~~~~~~~~~l~gh~~~via~DG~~----~~P~~~d~v~l-~pgeR~dv~v~~~~~~g~~~~~~~~~ 254 (524)
+| ...|+||||||.|+|++.+|.. ..|...||+.| .+|+++.|.|++++ ||.|.+|||..
T Consensus 412 ~N---~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDN-PG~W~~HCHi~ 476 (521)
T 1v10_A 412 PG---GGNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN-PGPWFLHCHID 476 (521)
T ss_dssp EC---CBSCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCS-CEEEEEEESCH
T ss_pred cC---CCCCCEEEccceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCC-CeeEEEeeChH
Confidence 99 4689999999999999999875 25889999999 79999999999997 69999999963
No 55
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.71 E-value=3.3e-16 Score=162.10 Aligned_cols=224 Identities=14% Similarity=0.173 Sum_probs=154.1
Q ss_pred CccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCc-----cccccCCCCCceEEEE
Q 009854 8 CSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-YNVSIHWHGVRQLRTCWADGPAY-----ITQCPIQPGQNYIYNF 81 (524)
Q Consensus 8 g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~-----~~q~~i~PG~~~~y~~ 81 (524)
|.....+++||+. .|+|.|++|+ |+||.|... ....+|++|....... .||... +....|.||||++..+
T Consensus 208 g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa-~DGg~~~~P~~~~~l~l~pgeR~dvlv 283 (481)
T 3zx1_A 208 GREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVG-TDGGLIEKTIYKEELFLSPASRVEVLI 283 (481)
T ss_dssp CCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEE-ETTEEEEEEEEESSEEECTTCEEEEEE
T ss_pred CCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEE-cCCCccCCceEeCeEEECCccEEEEEE
Confidence 5566889999997 4999999999 999999984 5678999998855543 787321 3456799999999999
Q ss_pred EeCCcccceeeccChHHHHhhc----------eeeEEEcCCCC-CC------CCCCCCCccEEEEeceeecc-------c
Q 009854 82 TLAGQRGTLWWHAHILWLRATV----------HGAIVILPKRG-VP------YPFPKPHKEVTVILSEWWKS-------D 137 (524)
Q Consensus 82 ~~~~~~Gt~wyH~H~~~~~~Gl----------~G~~iV~~~~~-~~------~~~~~~~~e~~l~~~d~~~~-------~ 137 (524)
++ .+.|+|...++.... .|+ ..-+-+..... .+ .+.+..+....+.++..... .
T Consensus 284 ~~-~~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~ 361 (481)
T 3zx1_A 284 DA-PKDGNFKLESAYYDR-DKMMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGKS 361 (481)
T ss_dssp EC-SSCEEEEEEECCCCC-CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCCCCCCCCCCEEEEEEEEECCSTTTTGGGCC
T ss_pred Ec-CCCcEEEEEEecccc-cCccccCCCCceeEEEEecCCCCccCCccccCCCCCCCCCcEEEEEEeccchhcccccccc
Confidence 98 567777766543211 111 11122221110 00 01112223333444321100 0
Q ss_pred HHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEe--cC
Q 009854 138 VEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEV--DA 215 (524)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~--DG 215 (524)
....... . ...++|||+.+. ...+.++++.|++++|+|+|.+ ...|+||||||.|+|++. +|
T Consensus 362 ~~~~~~~-~--------~~~~~iNG~~~~------~~~~~~~~~~G~~v~w~l~N~~-~~~Hp~HlHG~~F~vl~~~~~g 425 (481)
T 3zx1_A 362 EGELKIA-L--------ASMFLINRKSYD------LKRIDLSSKLGVVEDWIVINKS-HMDHPFHIHGTQFELISSKLNG 425 (481)
T ss_dssp HHHHHHH-H--------HTTEEETTBCCC------TTCCCEEEETTCCEEEEEEECS-SSCEEEEETTCCEEEEEEEETT
T ss_pred ccccccc-c--------cceeEECCEeCC------CCCceEEeCCCCEEEEEEEcCC-CCceeEEEeccEEEEEEecccC
Confidence 0000000 0 135999999862 1346799999999999999977 789999999999999999 99
Q ss_pred ccc---ceeEecEEEeCCCceEEEEEEeCCCCCceEEEEeeC
Q 009854 216 AYV---KPFKTETVLIAPGQTTNVLLSAAHATGKYLVAASPF 254 (524)
Q Consensus 216 ~~~---~P~~~d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~~ 254 (524)
... ++.+.|+|.|.||+++.|.+++++ ||.|+++||..
T Consensus 426 ~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~-pG~w~~HCHil 466 (481)
T 3zx1_A 426 KVQKAEFRALRDTINVRPNEELRLRMKQDF-KGLRMYHCHIL 466 (481)
T ss_dssp EEEECSSCCEESEEEECTTCEEEEEECCCS-CEEEEEEESSH
T ss_pred CCCCcccCcccceEEECCCCEEEEEEEcCC-CeeEEEEcCCh
Confidence 865 367899999999999999999987 69999999964
No 56
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.66 E-value=2.1e-15 Score=156.00 Aligned_cols=235 Identities=13% Similarity=0.167 Sum_probs=150.7
Q ss_pred CccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC-CCceEEe-cCccccCCCCCCCCCc-----cccccCCCCCceEEE
Q 009854 8 CSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-YNVSIHW-HGVRQLRTCWADGPAY-----ITQCPIQPGQNYIYN 80 (524)
Q Consensus 8 g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~~iH~-HG~~~~~~~~~DG~~~-----~~q~~i~PG~~~~y~ 80 (524)
|.....+++||+.. |.+.+ +|+++|+||.|... ....+++ +|....... .||.+. ++...|.||||++..
T Consensus 180 g~~gd~~lvNG~~~-p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa-~DG~~l~~P~~~~~l~l~pGeR~dvl 256 (488)
T 3od3_A 180 GWFGDTLLTNGAIY-PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIA-SDGGLLPEPVKVSELPVLMGERFEVL 256 (488)
T ss_dssp CCCCSEEEETTBSS-CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEE-ETTEEEEEEEEESCEEECTTCEEEEE
T ss_pred CCCCCEEEEcCCcC-ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEE-eCCCcccCccEeceEEECCCCEEEEE
Confidence 55668899999974 88876 67899999999974 4567777 676544433 798432 345679999999999
Q ss_pred EEeCCcccceeeccChHHHHhhc-----ee---eEEEcC-----CCCCC---C--C-CCC----CCccEEEEeceee-cc
Q 009854 81 FTLAGQRGTLWWHAHILWLRATV-----HG---AIVILP-----KRGVP---Y--P-FPK----PHKEVTVILSEWW-KS 136 (524)
Q Consensus 81 ~~~~~~~Gt~wyH~H~~~~~~Gl-----~G---~~iV~~-----~~~~~---~--~-~~~----~~~e~~l~~~d~~-~~ 136 (524)
+++ .+.++|+.-+..... .|+ .. .+-|.+ ....+ . + .+. ..+++.+.+.... ..
T Consensus 257 v~~-~~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~ 334 (488)
T 3od3_A 257 VEV-NDNKPFDLVTLPVSQ-MGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMM 334 (488)
T ss_dssp EEE-CTTCCEEEEECCCSS-TTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCCCCCCCCCCTTCCEEEEEEEECHHHHHH
T ss_pred EEe-CCCceEEEEEeccCC-CCcccccccCccceeEecccccCCCCCCCcccccCCCCcccccccceEEEEEeccccccc
Confidence 999 456777665432111 111 00 111221 11111 0 0 111 1233444432100 00
Q ss_pred cHHHHHHHHHh---cCC----------CC-C----------CCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEe
Q 009854 137 DVEAVINEALK---SGL----------AP-N----------VSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLIN 192 (524)
Q Consensus 137 ~~~~~~~~~~~---~g~----------~~-~----------~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN 192 (524)
....++..+.. .+. .. . ....|+|||+.+.. ..+.++++.|+++||+|+|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~------~~~~~~~~~G~~e~w~l~N 408 (488)
T 3od3_A 335 GMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDM------NKPMFAAAKGQYERWVISG 408 (488)
T ss_dssp HHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCT------TCCSEECCBSSCEEEEEEC
T ss_pred ccccccccccccccccccccccccccccCccccccccccccccceeeECCeeCCC------CCCceEcCCCCEEEEEEEe
Confidence 00001111000 000 00 0 01247999998732 3467899999999999999
Q ss_pred cCCCCeEEEEEcCceeeEEEecCcccc---eeEecEEEeCCCceEEEEEEeCCC---CCceEEEEeeC
Q 009854 193 AALNEELFFKIAGHKLTVVEVDAAYVK---PFKTETVLIAPGQTTNVLLSAAHA---TGKYLVAASPF 254 (524)
Q Consensus 193 ~~~~~~~~~~l~gh~~~via~DG~~~~---P~~~d~v~l~pgeR~dv~v~~~~~---~g~~~~~~~~~ 254 (524)
.+....|+||||||.|+|++.||.... +.+.|+|.|. |+++.|+|+|+++ +|.|++|||..
T Consensus 409 ~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 409 VGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp TTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSH
T ss_pred CCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCch
Confidence 997678999999999999999998764 3578999999 9999999999763 47999999964
No 57
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.66 E-value=5.1e-15 Score=156.06 Aligned_cols=224 Identities=14% Similarity=0.144 Sum_probs=151.6
Q ss_pred cccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCc----cccccCCCCCceEEEEEeC
Q 009854 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-YNVSIHWHGVRQLRTCWADGPAY----ITQCPIQPGQNYIYNFTLA 84 (524)
Q Consensus 10 ~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~~q~~i~PG~~~~y~~~~~ 84 (524)
....+++||+. .|+|+|++|+++|+||.|... ....++++|....... .||++. +....|.||||++..++++
T Consensus 166 ~~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~l~~gqR~dvlv~~~ 243 (534)
T 1zpu_A 166 IPQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE-IDGITTEKNVTDMLYITVAQRYTVLVHTK 243 (534)
T ss_dssp CCSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECC
T ss_pred CCceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe-ccCcCccccEeceEEECccceEEEEEEcC
Confidence 45789999997 599999999999999999984 4567899888765543 788542 3356689999999999984
Q ss_pred Cc-ccceeeccChHHHH-----h--hcee-eEEEcCCCC-CCCC-----C------------------CCCCccEEEEec
Q 009854 85 GQ-RGTLWWHAHILWLR-----A--TVHG-AIVILPKRG-VPYP-----F------------------PKPHKEVTVILS 131 (524)
Q Consensus 85 ~~-~Gt~wyH~H~~~~~-----~--Gl~G-~~iV~~~~~-~~~~-----~------------------~~~~~e~~l~~~ 131 (524)
++ .|.||......... . .... +++...... .+.+ + ...++.+.+.++
T Consensus 244 ~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~ 323 (534)
T 1zpu_A 244 NDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVV 323 (534)
T ss_dssp SCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEE
T ss_pred CCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEE
Confidence 33 57899987643221 0 1111 222222111 0000 0 011111111111
Q ss_pred eeecccHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCC--------------C----CCCceeEEEecCCEEEEEEEec
Q 009854 132 EWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSC--------------P----SQGGFKLPVESGKTYMLRLINA 193 (524)
Q Consensus 132 d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~--------------~----~~~~p~~~v~~G~~~rlRliN~ 193 (524)
- .. .+ .....++|||+.+..... + ......+.++.|++++|.|.|.
T Consensus 324 ~--~~-----------~~---~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~ 387 (534)
T 1zpu_A 324 M--DN-----------LK---NGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQ 387 (534)
T ss_dssp E--EE-----------CT---TSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEEC
T ss_pred e--ec-----------cC---CceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCC
Confidence 0 00 00 112467899987632100 0 0013468999999999999999
Q ss_pred CCCCeEEEEEcCceeeEEEecCc-----------c---------cceeEecEEEeCCCceEEEEEEeCCCCCceEEEEee
Q 009854 194 ALNEELFFKIAGHKLTVVEVDAA-----------Y---------VKPFKTETVLIAPGQTTNVLLSAAHATGKYLVAASP 253 (524)
Q Consensus 194 ~~~~~~~~~l~gh~~~via~DG~-----------~---------~~P~~~d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~ 253 (524)
+ ...|+||||||.|+|++.++. + ..|...||+.|.||+.+.|.|++++ ||.|.+|||.
T Consensus 388 ~-~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDN-PG~W~~HCHi 465 (534)
T 1zpu_A 388 D-TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADN-PGVWFFHCHI 465 (534)
T ss_dssp S-SSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCS-CEEEEEEECC
T ss_pred C-CCCCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCC-CeeEEEEeCc
Confidence 8 678999999999999998853 1 1478899999999999999999998 6999999995
No 58
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.66 E-value=5.8e-15 Score=153.84 Aligned_cols=241 Identities=17% Similarity=0.180 Sum_probs=153.2
Q ss_pred cccEEEEcCcC---------CCcEEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCc----cccccCCCCC
Q 009854 10 TKPIVTVNGYF---------PGPTIVAREDDTVLVKVVNHVK-YNVSIHWHGVRQLRTCWADGPAY----ITQCPIQPGQ 75 (524)
Q Consensus 10 ~~~~~~~NG~~---------pgP~i~~~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~~q~~i~PG~ 75 (524)
....+++||+- +-|.|+|++|+++|+||.|... ....++++|....... .||.+. +....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCce
Confidence 45789999963 3379999999999999999874 5578899998755543 798542 3356799999
Q ss_pred ceEEEEEeCCcccceeeccChHH----HHhhceeeEEEcCCCCCCCCCCCCCc-cEEEEeceeecccHHHH-HHHHHhcC
Q 009854 76 NYIYNFTLAGQRGTLWWHAHILW----LRATVHGAIVILPKRGVPYPFPKPHK-EVTVILSEWWKSDVEAV-INEALKSG 149 (524)
Q Consensus 76 ~~~y~~~~~~~~Gt~wyH~H~~~----~~~Gl~G~~iV~~~~~~~~~~~~~~~-e~~l~~~d~~~~~~~~~-~~~~~~~g 149 (524)
|++..+++++.+|.||..+.... ...|...+++.........|...... ... .+.+......... .......+
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTT
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCC
Confidence 99999999666799999875321 11233334443332211111000000 000 0000000000000 00000000
Q ss_pred CC--------CCCCceEEEcCCCCCCCCC-----------C----CCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCc
Q 009854 150 LA--------PNVSDAHTINGHPGPLSSC-----------P----SQGGFKLPVESGKTYMLRLINAALNEELFFKIAGH 206 (524)
Q Consensus 150 ~~--------~~~~~~~~iNG~~~~~~~~-----------~----~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh 206 (524)
.. ...+..|+|||+.+....- . ......+.++.|++++|.|.|......|+||||||
T Consensus 325 ~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh 404 (495)
T 3t6v_A 325 GADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGH 404 (495)
T ss_dssp CSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTC
T ss_pred CCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCC
Confidence 00 0012368899987632100 0 01235689999999999998433467899999999
Q ss_pred eeeEEEecCccc----ceeEecEEEeCC-CceEEEEEEeCCCCCceEEEEee
Q 009854 207 KLTVVEVDAAYV----KPFKTETVLIAP-GQTTNVLLSAAHATGKYLVAASP 253 (524)
Q Consensus 207 ~~~via~DG~~~----~P~~~d~v~l~p-geR~dv~v~~~~~~g~~~~~~~~ 253 (524)
.|.|++.+|... .|...|++.|.+ |+.+.+.|++++ ||.|.+|||.
T Consensus 405 ~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adn-PG~W~~HCHi 455 (495)
T 3t6v_A 405 DFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDN-PGPWFLHCHI 455 (495)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCS-CEEEEEEESC
T ss_pred cEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCC-CeeEEEEecc
Confidence 999999988653 588999999997 999999999998 6999999995
No 59
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.63 E-value=6.1e-15 Score=156.61 Aligned_cols=211 Identities=17% Similarity=0.159 Sum_probs=139.7
Q ss_pred EEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCc----cccccCCCCCceEEEEEe-CCcccceeeccChH
Q 009854 24 TIVAREDDTVLVKVVNHVK-YNVSIHWHGVRQLRTCWADGPAY----ITQCPIQPGQNYIYNFTL-AGQRGTLWWHAHIL 97 (524)
Q Consensus 24 ~i~~~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~~q~~i~PG~~~~y~~~~-~~~~Gt~wyH~H~~ 97 (524)
+|+|++|+++|+||.|... ....+|++|....... .||.+. +....|.||||++..+++ ++.+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE-ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE-ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999975 4567999998766543 788532 345678999999999998 44589999998754
Q ss_pred HH---HhhceeeEEEcCCCCCCCC------CC--------------------------CCCccEEEEeceeecccHHHHH
Q 009854 98 WL---RATVHGAIVILPKRGVPYP------FP--------------------------KPHKEVTVILSEWWKSDVEAVI 142 (524)
Q Consensus 98 ~~---~~Gl~G~~iV~~~~~~~~~------~~--------------------------~~~~e~~l~~~d~~~~~~~~~~ 142 (524)
.. .....+.|-.........+ .+ ..++.+.+.++.-
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~--------- 354 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQN--------- 354 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEE---------
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEeec---------
Confidence 21 1111222333222210000 00 0011111111000
Q ss_pred HHHHhcCCCCCCCceEEEcCCCCCCC----------------C----------CCC-----------CCceeEEEecCCE
Q 009854 143 NEALKSGLAPNVSDAHTINGHPGPLS----------------S----------CPS-----------QGGFKLPVESGKT 185 (524)
Q Consensus 143 ~~~~~~g~~~~~~~~~~iNG~~~~~~----------------~----------~~~-----------~~~p~~~v~~G~~ 185 (524)
.......|+|||+.+..- + |.. .....+.++.|++
T Consensus 355 --------~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~ 426 (552)
T 1aoz_A 355 --------VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEV 426 (552)
T ss_dssp --------EETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCE
T ss_pred --------cCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCE
Confidence 000012467788754110 0 000 0124589999999
Q ss_pred EEEEEEecCC-----CCeEEEEEcCceeeEEEec-Ccc----------cceeEecEEEeCCCceEEEEEEeCCCCCceEE
Q 009854 186 YMLRLINAAL-----NEELFFKIAGHKLTVVEVD-AAY----------VKPFKTETVLIAPGQTTNVLLSAAHATGKYLV 249 (524)
Q Consensus 186 ~rlRliN~~~-----~~~~~~~l~gh~~~via~D-G~~----------~~P~~~d~v~l~pgeR~dv~v~~~~~~g~~~~ 249 (524)
++|.|.|.+. ...|+||||||.|+|++.. |.+ ..|...||+.|.+|+.+.|.|++++ ||.|.+
T Consensus 427 v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDN-PG~W~~ 505 (552)
T 1aoz_A 427 VDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADN-PGVWAF 505 (552)
T ss_dssp EEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCS-CEEEEE
T ss_pred EEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCC-CeEEEE
Confidence 9999999874 3479999999999999984 553 2578999999999999999999998 699999
Q ss_pred EEee
Q 009854 250 AASP 253 (524)
Q Consensus 250 ~~~~ 253 (524)
|||.
T Consensus 506 HCHi 509 (552)
T 1aoz_A 506 HCHI 509 (552)
T ss_dssp EESS
T ss_pred Eeee
Confidence 9995
No 60
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.63 E-value=1.1e-14 Score=151.81 Aligned_cols=238 Identities=14% Similarity=0.135 Sum_probs=151.6
Q ss_pred cccEEEEcCcC--------CCcEEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCc----cccccCCCCCc
Q 009854 10 TKPIVTVNGYF--------PGPTIVAREDDTVLVKVVNHVK-YNVSIHWHGVRQLRTCWADGPAY----ITQCPIQPGQN 76 (524)
Q Consensus 10 ~~~~~~~NG~~--------pgP~i~~~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~~q~~i~PG~~ 76 (524)
....+++||+- +-|.|+|++|+++|+||.|... ....+|++|....... .||.+. +....|.||||
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcE
Confidence 45789999973 3479999999999999999874 4578999998766543 798542 33566899999
Q ss_pred eEEEEEeCCcccceeeccChHH----HHhhceeeEEEcCCCCCCCCCCCCCccEEEEeceeecccHH-------HHHHHH
Q 009854 77 YIYNFTLAGQRGTLWWHAHILW----LRATVHGAIVILPKRGVPYPFPKPHKEVTVILSEWWKSDVE-------AVINEA 145 (524)
Q Consensus 77 ~~y~~~~~~~~Gt~wyH~H~~~----~~~Gl~G~~iV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~-------~~~~~~ 145 (524)
++..+++++.+|.||..+.... ...+..-+++.........+........ ..+.+....... ......
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCC
Confidence 9999999666799999875321 1122222333332211111100000000 000000000000 000000
Q ss_pred -----HhcCCCCCCCceEEEcCCCCCCCCC-----------C----CCCceeEEEecCCEEEEEEEec--CCCCeEEEEE
Q 009854 146 -----LKSGLAPNVSDAHTINGHPGPLSSC-----------P----SQGGFKLPVESGKTYMLRLINA--ALNEELFFKI 203 (524)
Q Consensus 146 -----~~~g~~~~~~~~~~iNG~~~~~~~~-----------~----~~~~p~~~v~~G~~~rlRliN~--~~~~~~~~~l 203 (524)
...+ ..+..|+|||+.+....- + ......+.++.|++|+|.|.|. .....|+|||
T Consensus 323 d~~~~l~~~---~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HL 399 (499)
T 3pxl_A 323 DKAINMAFN---FNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHL 399 (499)
T ss_dssp SEEEECCEE---ECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEE
T ss_pred cEEEEEEEE---ecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCcccee
Confidence 0000 012368899987631100 0 0123578999999999999942 2256899999
Q ss_pred cCceeeEEEecCccc----ceeEecEEEeCC---CceEEEEEEeCCCCCceEEEEee
Q 009854 204 AGHKLTVVEVDAAYV----KPFKTETVLIAP---GQTTNVLLSAAHATGKYLVAASP 253 (524)
Q Consensus 204 ~gh~~~via~DG~~~----~P~~~d~v~l~p---geR~dv~v~~~~~~g~~~~~~~~ 253 (524)
|||.|.|++.+|... .|...|++.|.+ |+.+.+.|++++ ||.|.+|||.
T Consensus 400 HGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adn-PG~W~~HCHi 455 (499)
T 3pxl_A 400 HGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNN-PGPWFLHCHI 455 (499)
T ss_dssp TTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCS-CEEEEEEESS
T ss_pred cCCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCC-CceEEEEeCC
Confidence 999999999888643 588999999987 999999999998 6999999995
No 61
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.62 E-value=9.9e-15 Score=154.94 Aligned_cols=235 Identities=14% Similarity=0.087 Sum_probs=148.5
Q ss_pred CccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC-CCceEEecCc-------cccCCCCCCCCCc-----cc------c
Q 009854 8 CSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-YNVSIHWHGV-------RQLRTCWADGPAY-----IT------Q 68 (524)
Q Consensus 8 g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~~iH~HG~-------~~~~~~~~DG~~~-----~~------q 68 (524)
|.....++|||+. .|.|.|++| ++|+||.|... ....+++.|. ...... .||.+. +. .
T Consensus 251 ~~~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa-~DG~~l~~P~~~~~~~~~~~ 327 (612)
T 2g23_A 251 PFFGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG-SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCCCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE-ETTEEEEEEEEECSSSSSSS
T ss_pred CCcCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEE-eCCeEccCCEEecccCcccE
Confidence 3557899999997 599999999 99999999984 5567888775 222222 788532 22 5
Q ss_pred ccCCCCCceEEEEEeCCcccc-eeeccChHHHHhh-----------ceeeEEEcCCC-CCCCCCCCCC------------
Q 009854 69 CPIQPGQNYIYNFTLAGQRGT-LWWHAHILWLRAT-----------VHGAIVILPKR-GVPYPFPKPH------------ 123 (524)
Q Consensus 69 ~~i~PG~~~~y~~~~~~~~Gt-~wyH~H~~~~~~G-----------l~G~~iV~~~~-~~~~~~~~~~------------ 123 (524)
..|.||||++.-+++.+.+|+ ++...-......| ..--|.|.... .....+++..
T Consensus 328 l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~ 407 (612)
T 2g23_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccc
Confidence 679999999999999655674 5555432111111 11124444332 1111111110
Q ss_pred -ccEEEEec------------eeecccHHHHHHHHHhc--C-----CCCCCCceEEEcCCCCCCCCCCCCCceeEEEecC
Q 009854 124 -KEVTVILS------------EWWKSDVEAVINEALKS--G-----LAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESG 183 (524)
Q Consensus 124 -~e~~l~~~------------d~~~~~~~~~~~~~~~~--g-----~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G 183 (524)
....+++. -|....... ....... + ........++|||+.+. ..+.++++.|
T Consensus 408 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~-------~~~~~~v~~G 479 (612)
T 2g23_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVED-PADVQVPAEGVIQVTGADGRTKTYRRTAATFN-------DGLGFTIGEG 479 (612)
T ss_dssp CEEEEEEECCTTCTTSTTCCCEEEEEEEC------CCSCTTEEEEECTTSCEEEEEEEECSTT-------SCCCEEEETT
T ss_pred cceeEEeeccccccccccccceeecccccc-ccccccccccceeeeccCCceeEEEECCccCC-------CCCceEecCC
Confidence 01122221 010000000 0000000 0 00001135889999862 3478999999
Q ss_pred CEEEEEEEecCCCCeEEEEEcCceeeEEEecCc------------------------cc---ceeEecEEEeCCCceEEE
Q 009854 184 KTYMLRLINAALNEELFFKIAGHKLTVVEVDAA------------------------YV---KPFKTETVLIAPGQTTNV 236 (524)
Q Consensus 184 ~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~------------------------~~---~P~~~d~v~l~pgeR~dv 236 (524)
++++|+|+|.+ ...|+||||||.|+|++.+|. .. ++.+.|++.|.||+++.|
T Consensus 480 ~~v~w~l~N~~-~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i 558 (612)
T 2g23_A 480 THEQWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRV 558 (612)
T ss_dssp CEEEEEEEECS-SSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEE
T ss_pred CEEEEEEEeCC-CCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEE
Confidence 99999999998 779999999999999987532 11 234789999999999999
Q ss_pred EEEeCCCCCceEEEEeeC
Q 009854 237 LLSAAHATGKYLVAASPF 254 (524)
Q Consensus 237 ~v~~~~~~g~~~~~~~~~ 254 (524)
.++++..||.|++|||..
T Consensus 559 ~~~~~~~pG~w~~HCHil 576 (612)
T 2g23_A 559 MGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EEECCSCCEEEEEEESSH
T ss_pred EEEeCCCCccEEEEeCch
Confidence 999995579999999964
No 62
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.62 E-value=3.6e-14 Score=150.56 Aligned_cols=242 Identities=12% Similarity=0.080 Sum_probs=149.4
Q ss_pred cccEEEEcCcCC--------CcEEEEecCCEEEEEEEeCCCC-CceEEecCccccCCCCCCCCCc----cccccCCCCCc
Q 009854 10 TKPIVTVNGYFP--------GPTIVAREDDTVLVKVVNHVKY-NVSIHWHGVRQLRTCWADGPAY----ITQCPIQPGQN 76 (524)
Q Consensus 10 ~~~~~~~NG~~p--------gP~i~~~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~~~~~~DG~~~----~~q~~i~PG~~ 76 (524)
....+++||+.. -|+|+|++|+++|+||.|.... ...+|++|....... .||.+. +....|.||||
T Consensus 194 ~~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR 272 (559)
T 2q9o_A 194 FSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQR 272 (559)
T ss_dssp CBSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCE
T ss_pred ccceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEE
Confidence 456899999973 2799999999999999999854 568999998765543 788652 34567899999
Q ss_pred eEEEEEeCCcccceeeccCh--HHH---H-hhc-eeeEEEcCCCCCCCCCCC----CC----ccEEE-EeceeecccHH-
Q 009854 77 YIYNFTLAGQRGTLWWHAHI--LWL---R-ATV-HGAIVILPKRGVPYPFPK----PH----KEVTV-ILSEWWKSDVE- 139 (524)
Q Consensus 77 ~~y~~~~~~~~Gt~wyH~H~--~~~---~-~Gl-~G~~iV~~~~~~~~~~~~----~~----~e~~l-~~~d~~~~~~~- 139 (524)
++..+++++.+|.||..... ... . ... .+.+....... ..|... .+ .+..+ .+.........
T Consensus 273 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~-~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~ 351 (559)
T 2q9o_A 273 YDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPG-GLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSF 351 (559)
T ss_dssp EEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCC-SCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTC
T ss_pred EEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCC-CCCCCCCCcCCCcccccccccccCCCCCCCCccc
Confidence 99999986567999988764 211 1 111 22222322211 001000 00 00000 00000000000
Q ss_pred --HHHHHH-HhcCCCCCCCceEEEcCCCCCCCCCCC-------------CCceeEEEecCCEEEEEEEecCC----CCeE
Q 009854 140 --AVINEA-LKSGLAPNVSDAHTINGHPGPLSSCPS-------------QGGFKLPVESGKTYMLRLINAAL----NEEL 199 (524)
Q Consensus 140 --~~~~~~-~~~g~~~~~~~~~~iNG~~~~~~~~~~-------------~~~p~~~v~~G~~~rlRliN~~~----~~~~ 199 (524)
...... ............++|||+.+....-.. .....+.++.++.+++.++|... ...|
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~H 431 (559)
T 2q9o_A 352 VKRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPH 431 (559)
T ss_dssp CCCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCE
T ss_pred ccceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCC
Confidence 000000 000000011246899999863210000 01234778777777776777654 5789
Q ss_pred EEEEcCceeeEEEecC---------cc------------cceeEecEEEeCCCceEEEEEEeCCCCCceEEEEeeC
Q 009854 200 FFKIAGHKLTVVEVDA---------AY------------VKPFKTETVLIAPGQTTNVLLSAAHATGKYLVAASPF 254 (524)
Q Consensus 200 ~~~l~gh~~~via~DG---------~~------------~~P~~~d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~~ 254 (524)
+||||||.|+|++.++ +. ..|...||+.|.+++++.|.|++++ ||.|++|||..
T Consensus 432 P~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adN-PG~W~~HCHil 506 (559)
T 2q9o_A 432 PMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDN-PGAWLFHCHIA 506 (559)
T ss_dssp EEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCS-CEEEEEEECCH
T ss_pred cEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCC-CeeEEEEecch
Confidence 9999999999999987 32 1467899999999999999999998 69999999963
No 63
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.61 E-value=7.6e-15 Score=151.54 Aligned_cols=213 Identities=15% Similarity=0.109 Sum_probs=145.6
Q ss_pred CccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC-CCceEEe--cC---ccccCCCCCCCCCc-----cccccCCCCCc
Q 009854 8 CSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-YNVSIHW--HG---VRQLRTCWADGPAY-----ITQCPIQPGQN 76 (524)
Q Consensus 8 g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~~iH~--HG---~~~~~~~~~DG~~~-----~~q~~i~PG~~ 76 (524)
|.....+++||+. .|+|+|++| ++|+||.|... ....+|+ +| ....... .||.+. +....|.||||
T Consensus 166 ~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via-~DG~~~~~P~~~~~l~l~pgeR 242 (448)
T 3aw5_A 166 GFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIA-VDQGFLARPIEVRALFLAPAER 242 (448)
T ss_dssp CCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEE-ETTEEEEEEEEESCEEECTTCE
T ss_pred CccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEE-eCCCccCCceEeceEEECCcce
Confidence 5567899999997 499999999 99999999985 4677999 77 5444332 788542 33566899999
Q ss_pred eEEEEEeCCcccceeeccChHHHH-h---hc----------eee--EEEcCCCCC--CCCC---C----CCCccEEEEec
Q 009854 77 YIYNFTLAGQRGTLWWHAHILWLR-A---TV----------HGA--IVILPKRGV--PYPF---P----KPHKEVTVILS 131 (524)
Q Consensus 77 ~~y~~~~~~~~Gt~wyH~H~~~~~-~---Gl----------~G~--~iV~~~~~~--~~~~---~----~~~~e~~l~~~ 131 (524)
++..++++ .+.||..++..... . ++ ... +.+...... +..+ + ....+..+.+.
T Consensus 243 ~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~ 320 (448)
T 3aw5_A 243 AEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALS 320 (448)
T ss_dssp EEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEE
T ss_pred EEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEe
Confidence 99999984 47888887642110 0 01 111 222111110 0000 0 01112222221
Q ss_pred eeecccHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCceeEE-EecCCEEEEEEEecCCCCeEEEEEcCceeeE
Q 009854 132 EWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLP-VESGKTYMLRLINAALNEELFFKIAGHKLTV 210 (524)
Q Consensus 132 d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~-v~~G~~~rlRliN~~~~~~~~~~l~gh~~~v 210 (524)
. + ...|+|||+.+.. ..+.++ ++.|++++|+|.|.+....|+||||||.|+|
T Consensus 321 ~----------------~-----~~~~~iNg~~~~~------~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~V 373 (448)
T 3aw5_A 321 L----------------S-----GMQWTINGMFWNA------SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWI 373 (448)
T ss_dssp E----------------E-----TTEEEETTBCCCT------TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEE
T ss_pred C----------------C-----CceeeECCCcCCC------CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEE
Confidence 0 0 0248999998732 234567 9999999999999985678999999999999
Q ss_pred EEecCccc------------ce---eEecEEEeCCCceEEEEEEeC---C-CCCceEEEEeeC
Q 009854 211 VEVDAAYV------------KP---FKTETVLIAPGQTTNVLLSAA---H-ATGKYLVAASPF 254 (524)
Q Consensus 211 ia~DG~~~------------~P---~~~d~v~l~pgeR~dv~v~~~---~-~~g~~~~~~~~~ 254 (524)
++.+|... .| ...||+.+.||+++.+++++. . .| |.+|||..
T Consensus 374 l~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil 434 (448)
T 3aw5_A 374 IERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNL 434 (448)
T ss_dssp EEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSH
T ss_pred EEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCCh
Confidence 99999764 23 589999999999999996664 2 24 99999963
No 64
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.56 E-value=2.1e-14 Score=141.36 Aligned_cols=218 Identities=16% Similarity=0.196 Sum_probs=151.6
Q ss_pred ceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceEEEEEEeCC------------
Q 009854 175 GFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAH------------ 242 (524)
Q Consensus 175 ~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~dv~v~~~~------------ 242 (524)
.|+|+++.|++++++|.|.. .....||.||..+.- +.||... ..-.|.||+++...+++..
T Consensus 41 GP~i~~~~Gd~v~v~~~N~l-~~~~siH~HG~~~~~-~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~ 113 (313)
T 3tas_A 41 GPLIELNEGDTLHIEFENTM-DVPVSLHVHGLDYEI-SSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTWRAG 113 (313)
T ss_dssp CCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECC-CCCccEeecCCcCCc-cCCCCcc-----ccCCcCCCCEEEEEEEeccCCccccccccCC
Confidence 48999999999999999998 677889999987653 5688753 1224789999999887653
Q ss_pred CCCceEEEEeeCCCCCc-cccCCCCeEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCCCCCCCcce
Q 009854 243 ATGKYLVAASPFLDTPA-ILVDNKTATATVHYSGTLGSTATTLTVPPPRNATPVAANFTASLRSLNSKKYPARVPLKIDH 321 (524)
Q Consensus 243 ~~g~~~~~~~~~~~~~~-~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~ 321 (524)
..|.||.++|....... .... ....+.|-...... ...|+
T Consensus 114 ~~gt~~YH~h~~~~~~~~~~~~-~Gl~G~liV~~~~~--------------------------------------~~~d~ 154 (313)
T 3tas_A 114 SAGYWHYHDHVVGTEHGTGGIR-NGLYGPVIVRRKGD--------------------------------------VLPDR 154 (313)
T ss_dssp SCEEEEEECSSSSSTTCHHHHH-HTCEEEEEEECTTC--------------------------------------BCCSE
T ss_pred CceEEEEeecCcccccchhhhh-ccccCceEeecccc--------------------------------------ccccc
Confidence 24889999985321110 0000 12233333321100 01244
Q ss_pred EEEEEeccCccCCccccCCceEEEEecCeeeecCcchhhhhhhccccccccCCCCCCCCccccCCCCCCCCcccCCCceE
Q 009854 322 SLFFTIGLGINPCATCVNGSRVVADINNVTFVMPTISLLQAHFFKIGGVFTDDFPGNPPVTYNFTGTQPANFQTNNGTRI 401 (524)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 401 (524)
++.+.++. |++|+..+. ..+.
T Consensus 155 e~~l~~~d---------------~t~Ng~~~~--------------------------------------------~~~~ 175 (313)
T 3tas_A 155 THTIVFND---------------MTINNRPAH--------------------------------------------TGPD 175 (313)
T ss_dssp EEEEEEET---------------TEETTCCTT--------------------------------------------CCCC
T ss_pred cceeeccc---------------hhcccCCcc--------------------------------------------cccc
Confidence 44443211 456654320 1123
Q ss_pred EEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEe---
Q 009854 402 YRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRA--- 478 (524)
Q Consensus 402 ~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a--- 478 (524)
+.++.|++++|+|.|.+ ...|||||||+.|+|+..+... .....+.++||+.|.|++...+++.+
T Consensus 176 l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~~---------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~ 243 (313)
T 3tas_A 176 FEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGMLT---------GPDDPSQVIDNKICGPADSFGFQVIAGEG 243 (313)
T ss_dssp EEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSCC---------STTCCCCEESEEEECTTCEEEEEEETTTT
T ss_pred cccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCcc---------CCCCCCeeeeEEEeCCCcceEEEEEeccC
Confidence 67789999999999965 5689999999999998775221 12245678999999999988777754
Q ss_pred CCceeEEEEeechHhhhccceEEEEEcCCCC
Q 009854 479 DNPGVWFMHCHLEVHTTWGLKMAFIVDNGKG 509 (524)
Q Consensus 479 dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 509 (524)
+|||.|+|||||++|++.|||+.|.|++.+.
T Consensus 244 ~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 244 VGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred CCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 6899999999999999999999999997654
No 65
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.56 E-value=3.4e-14 Score=149.45 Aligned_cols=220 Identities=11% Similarity=0.074 Sum_probs=143.4
Q ss_pred CccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCC-CceEEecCc-cccCCCCCCCCCc-----cccccCCCCCceEEE
Q 009854 8 CSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKY-NVSIHWHGV-RQLRTCWADGPAY-----ITQCPIQPGQNYIYN 80 (524)
Q Consensus 8 g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~-~~~iH~HG~-~~~~~~~~DG~~~-----~~q~~i~PG~~~~y~ 80 (524)
+.....+++||+. .|.|.++.| ++|+||.|.... ...+|++|. ...... .||.+. +....|.||||++..
T Consensus 227 ~~~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via-~DG~~~~~P~~~~~l~l~pgeR~dvl 303 (513)
T 2wsd_A 227 AFCGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIG-SDGGLLPRSVKLNSFSLAPAERYDII 303 (513)
T ss_dssp CCCCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEE
T ss_pred ccccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEc-cCCCcccCceEeCeEEECCeeeEEEE
Confidence 4456889999997 599999885 999999999854 567999887 544332 798432 345678999999999
Q ss_pred EEeCCcccceeec-cChH--HHH-hhceee-EEEcCCC--CC--CCCCCCC------------CccEEEEeceeecccHH
Q 009854 81 FTLAGQRGTLWWH-AHIL--WLR-ATVHGA-IVILPKR--GV--PYPFPKP------------HKEVTVILSEWWKSDVE 139 (524)
Q Consensus 81 ~~~~~~~Gt~wyH-~H~~--~~~-~Gl~G~-~iV~~~~--~~--~~~~~~~------------~~e~~l~~~d~~~~~~~ 139 (524)
+++++.+|.++.- .-.. ... ...... +-..... .. ....+.. ..+..+.+....
T Consensus 304 v~~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~~----- 378 (513)
T 2wsd_A 304 IDFTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGTQ----- 378 (513)
T ss_dssp EECGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEEE-----
T ss_pred EECCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEeec-----
Confidence 9985446763321 1110 000 001111 2121111 00 0001100 011122221110
Q ss_pred HHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCc---
Q 009854 140 AVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAA--- 216 (524)
Q Consensus 140 ~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~--- 216 (524)
.......++|||+.+. ....+.++.|++++|+|.|.+ ...|+||||||.|+|++.++.
T Consensus 379 -----------~~~g~~~~~iNg~~~~-------~~~~~~~~~g~~~~w~l~N~~-~~~HP~HlHG~~F~Vl~~~~~~~~ 439 (513)
T 2wsd_A 379 -----------DEYGRPVLLLNNKRWH-------DPVTETPKVGTTEIWSIINPT-RGTHPIHLHLVSFRVLDRRPFDIA 439 (513)
T ss_dssp -----------CTTSCEEEEETTBCTT-------SCCCBCCBTTCEEEEEEEECS-SSCEEEEESSCCEEEEEEEEBCHH
T ss_pred -----------CCCCCceEeECCccCC-------CcccEecCCCCEEEEEEEcCC-CCCcCEeEeCceEEEEEecCcccc
Confidence 0001135789999862 224568999999999999998 679999999999999998762
Q ss_pred ------------c------cceeEecEEEeCCCceEEEEEEeCCCCCceEEEEeeC
Q 009854 217 ------------Y------VKPFKTETVLIAPGQTTNVLLSAAHATGKYLVAASPF 254 (524)
Q Consensus 217 ------------~------~~P~~~d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~~ 254 (524)
. -++.+.|++.|.||+++.|++++++.||.|.+|||..
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil 495 (513)
T 2wsd_A 440 RYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHAL 495 (513)
T ss_dssp HHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred cccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCCh
Confidence 0 0235899999999999999999965589999999964
No 66
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.54 E-value=6.6e-14 Score=147.37 Aligned_cols=218 Identities=14% Similarity=0.075 Sum_probs=141.7
Q ss_pred CccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCC-CceEEecC-------ccccCCCCCCCCCc-----cccccCCCC
Q 009854 8 CSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKY-NVSIHWHG-------VRQLRTCWADGPAY-----ITQCPIQPG 74 (524)
Q Consensus 8 g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~-~~~iH~HG-------~~~~~~~~~DG~~~-----~~q~~i~PG 74 (524)
|.....+++||+. .|.|.++.| ++|+||.|.... ...++++| ....... .||... +....|.||
T Consensus 198 ~~~gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa-~DG~~~~~P~~~~~l~l~pg 274 (534)
T 3abg_A 198 SFWGDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA-SDSGLLEHPADTSLLYISMA 274 (534)
T ss_dssp CCCCSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE-ETTEEEEEEEEESCEEECTT
T ss_pred cccCceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEEEEE-eCCCcccCceEeceEEECCc
Confidence 4456789999996 599999985 999999999854 46788876 3333222 788521 445679999
Q ss_pred CceEEEEEeCCccc-ceeeccChHHH--------HhhceeeEEEcCCCCC----CCCCCCC-----------CccEEEEe
Q 009854 75 QNYIYNFTLAGQRG-TLWWHAHILWL--------RATVHGAIVILPKRGV----PYPFPKP-----------HKEVTVIL 130 (524)
Q Consensus 75 ~~~~y~~~~~~~~G-t~wyH~H~~~~--------~~Gl~G~~iV~~~~~~----~~~~~~~-----------~~e~~l~~ 130 (524)
||++..+++++.+| +||........ .....+.+-....... ....+.. ..+..+.+
T Consensus 275 eR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~L~~~~~p~~~~~~~~~~~~ 354 (534)
T 3abg_A 275 ERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRF 354 (534)
T ss_dssp CEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCCCCCCSCCCCCCCCCEEEEC
T ss_pred cEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccccccCCCCCCccccceEEEE
Confidence 99999999855577 57766532100 0001111221111100 0000000 00111111
Q ss_pred ceeecccHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCceeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeE
Q 009854 131 SEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGKTYMLRLINAALNEELFFKIAGHKLTV 210 (524)
Q Consensus 131 ~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~v 210 (524)
. . ....|+|||+.+... .....+.++.|++++|.|.|.+....|+||||||.|+|
T Consensus 355 ~------------------~---~~~~w~iNG~~f~~~----~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~V 409 (534)
T 3abg_A 355 G------------------R---TGPTWTINGVAFADV----QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKV 409 (534)
T ss_dssp S------------------C---CCSTTCCCCBTTBCT----TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEE
T ss_pred e------------------c---cCceeEECCcccCCC----CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEE
Confidence 0 0 113478999986310 11234689999999999999986679999999999999
Q ss_pred EEe-cCc---cc---ceeEecEEEeCCCceEEEEEE-eCCCCCceEEEEeeC
Q 009854 211 VEV-DAA---YV---KPFKTETVLIAPGQTTNVLLS-AAHATGKYLVAASPF 254 (524)
Q Consensus 211 ia~-DG~---~~---~P~~~d~v~l~pgeR~dv~v~-~~~~~g~~~~~~~~~ 254 (524)
++. +|. .. +....|++.|.||+++.|.+. +++ ||.|.+|||..
T Consensus 410 l~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adn-pG~w~~HCHil 460 (534)
T 3abg_A 410 ISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPF-PGVYMFHCHNL 460 (534)
T ss_dssp EEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSC-CEEEEEEESCH
T ss_pred EEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCC-CccEEEecChH
Confidence 998 663 11 125689999999999999998 555 79999999964
No 67
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.51 E-value=3.5e-14 Score=137.26 Aligned_cols=100 Identities=21% Similarity=0.341 Sum_probs=84.2
Q ss_pred EEEcCcC--CCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCC--------ccccccCCCCCceEEEEEe
Q 009854 14 VTVNGYF--PGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPA--------YITQCPIQPGQNYIYNFTL 83 (524)
Q Consensus 14 ~~~NG~~--pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~--------~~~q~~i~PG~~~~y~~~~ 83 (524)
|+|||+. ++|.|++++||+|+++|.|.....+++|+||...... .+|.. ......|.||++++|.|.+
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~ 234 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 234 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEe
Confidence 6899998 8899999999999999999999999999999876544 45421 2334669999999999998
Q ss_pred CC--cccceeeccChHHHH-hhceeeEEEcCCCCC
Q 009854 84 AG--QRGTLWWHAHILWLR-ATVHGAIVILPKRGV 115 (524)
Q Consensus 84 ~~--~~Gt~wyH~H~~~~~-~Gl~G~~iV~~~~~~ 115 (524)
.+ .+|+||||||..... .||.|.|+|.+++..
T Consensus 235 ~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~~ 269 (276)
T 3kw8_A 235 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 269 (276)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred ccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCCC
Confidence 42 699999999987766 899999999988653
No 68
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.51 E-value=4.2e-15 Score=121.89 Aligned_cols=90 Identities=21% Similarity=0.165 Sum_probs=70.3
Q ss_pred CcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCC--CCCCCCccccccCCCCCceEEEEEeCCcccceeeccC
Q 009854 18 GYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTC--WADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAH 95 (524)
Q Consensus 18 G~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~--~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H 95 (524)
-++++|+|++++||+|+ |+|.+..++++||||...+... .+||.+ .++..|.||++++|+|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 36778999999999975 5799889999999998764310 122222 245679999999999987568999999999
Q ss_pred hHHHHhhceeeEEEcC
Q 009854 96 ILWLRATVHGAIVILP 111 (524)
Q Consensus 96 ~~~~~~Gl~G~~iV~~ 111 (524)
.| ..+||.|.|+|++
T Consensus 91 ~H-~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PH-RGAGMVGKITVEG 105 (105)
T ss_dssp TT-GGGTCEEEEEECC
T ss_pred Cc-hhcCCEEEEEEcC
Confidence 43 2479999999974
No 69
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.43 E-value=1.4e-11 Score=130.06 Aligned_cols=238 Identities=11% Similarity=0.027 Sum_probs=147.1
Q ss_pred cccEEEEcCcCC----------------CcEEEEecCCEEEEEEEeCCCC-CceEEecCccccCCCCCCCCCc----ccc
Q 009854 10 TKPIVTVNGYFP----------------GPTIVAREDDTVLVKVVNHVKY-NVSIHWHGVRQLRTCWADGPAY----ITQ 68 (524)
Q Consensus 10 ~~~~~~~NG~~p----------------gP~i~~~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~~~~~~DG~~~----~~q 68 (524)
....+++||+.. .++|.+++|+++|+||.|.... ...++++|....... .||++. +..
T Consensus 224 ~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa-~DG~~v~P~~~~~ 302 (580)
T 3sqr_A 224 ALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA-NDLVPIVPYTTDT 302 (580)
T ss_dssp CBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESS
T ss_pred CCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE-eCCccCCceEeeE
Confidence 346789999742 3799999999999999999854 568999998766543 798642 335
Q ss_pred ccCCCCCceEEEEEeCCcccceeeccChHH-----HHhhceeeEEEcCCCCCCCCCCCC--CccEEEEece--eecccH-
Q 009854 69 CPIQPGQNYIYNFTLAGQRGTLWWHAHILW-----LRATVHGAIVILPKRGVPYPFPKP--HKEVTVILSE--WWKSDV- 138 (524)
Q Consensus 69 ~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~~-----~~~Gl~G~~iV~~~~~~~~~~~~~--~~e~~l~~~d--~~~~~~- 138 (524)
..|.||||++..+++++.+|.||....... ...+..-+++.........|.... ..+. .+.+ ......
T Consensus 303 l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~--~~~~~~~~L~P~~ 380 (580)
T 3sqr_A 303 LLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGT--CEDEPVASLVPHL 380 (580)
T ss_dssp EEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCC--SCCSCGGGCCBSS
T ss_pred EEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccch--hhcccccccccCC
Confidence 668999999999999777899999976532 111222234443221111110000 0000 0000 000000
Q ss_pred -HHHHHHH-----HhcCCCCCCCceEEEcCCCCCCCCC--------CC-----CCceeEEE----ecCCEEEEEEEecC-
Q 009854 139 -EAVINEA-----LKSGLAPNVSDAHTINGHPGPLSSC--------PS-----QGGFKLPV----ESGKTYMLRLINAA- 194 (524)
Q Consensus 139 -~~~~~~~-----~~~g~~~~~~~~~~iNG~~~~~~~~--------~~-----~~~p~~~v----~~G~~~rlRliN~~- 194 (524)
....... ...+ ......+.|||..+....- ++ .....+.+ +.|++|.|.|-|.+
T Consensus 381 ~~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~ 458 (580)
T 3sqr_A 381 ALDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTG 458 (580)
T ss_dssp CCBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSS
T ss_pred CCCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCc
Confidence 0000000 0000 0011357789987521000 00 01112344 45999999999987
Q ss_pred CCCeEEEEEcCceeeEEEecCc------------ccceeEecEEEeCCCceEEEEEEeCCCCCceEEEEee
Q 009854 195 LNEELFFKIAGHKLTVVEVDAA------------YVKPFKTETVLIAPGQTTNVLLSAAHATGKYLVAASP 253 (524)
Q Consensus 195 ~~~~~~~~l~gh~~~via~DG~------------~~~P~~~d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~ 253 (524)
....|+||||||.|.|++.+.+ +..|...|++.+.+++.+.+.|++++ ||.|.+|||.
T Consensus 459 ~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adN-PG~W~~HCHi 528 (580)
T 3sqr_A 459 FGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDN-PGSWLLHCHI 528 (580)
T ss_dssp SCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCS-CEEEEEEECS
T ss_pred cccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCC-CeeeEEEECc
Confidence 2368999999999999998532 12478999999999999999999998 6999999995
No 70
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.35 E-value=1.4e-11 Score=133.06 Aligned_cols=236 Identities=11% Similarity=0.033 Sum_probs=137.7
Q ss_pred CccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCC-CCceEEecCcc-------ccCCCCCCCCCc-----------ccc
Q 009854 8 CSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVK-YNVSIHWHGVR-------QLRTCWADGPAY-----------ITQ 68 (524)
Q Consensus 8 g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~-~~~~iH~HG~~-------~~~~~~~DG~~~-----------~~q 68 (524)
|.....+++||+. -|.+.++. .++|+||.|... ....+.+-+.. ..... .||... ++.
T Consensus 251 ~~~gd~~~vNG~~-~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa-~DG~~l~~Pv~v~~p~~~~~ 327 (612)
T 3gyr_A 251 PFFGPYTTVNGRI-WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG-SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCCCSEEEETTEE-SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE-ETTEEEEEEEEECSSSSSSS
T ss_pred CccCceeeecCCc-cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEE-eCCCccccceeccCcccccE
Confidence 5567889999997 59998864 589999999874 44455554432 11111 688321 234
Q ss_pred ccCCCCCceEEEEEeCCcccceeeccChHHHH--------hhce----eeEEEcCCCC-CCCCCCC------------CC
Q 009854 69 CPIQPGQNYIYNFTLAGQRGTLWWHAHILWLR--------ATVH----GAIVILPKRG-VPYPFPK------------PH 123 (524)
Q Consensus 69 ~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~~~~--------~Gl~----G~~iV~~~~~-~~~~~~~------------~~ 123 (524)
..|.||||++..+++.+.+|.+|+-....... .+.. -.+.+..... .....+. ..
T Consensus 328 l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 407 (612)
T 3gyr_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccc
Confidence 67899999999999866566665542211100 1110 1112222111 0000000 00
Q ss_pred c-cEEEEeceeecccHH-----------HHHHHHHhc-------CCCCCCCceEEEcCCCCCCCCCCCCCceeEEEecCC
Q 009854 124 K-EVTVILSEWWKSDVE-----------AVINEALKS-------GLAPNVSDAHTINGHPGPLSSCPSQGGFKLPVESGK 184 (524)
Q Consensus 124 ~-e~~l~~~d~~~~~~~-----------~~~~~~~~~-------g~~~~~~~~~~iNG~~~~~~~~~~~~~p~~~v~~G~ 184 (524)
. ...+.+..-...... ......... .........+.+|++.+. ....+.++.|+
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-------~~~~~~~~~g~ 480 (612)
T 3gyr_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFN-------DGLGFTIGEGT 480 (612)
T ss_dssp CEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-------SCCCEEEETTC
T ss_pred cccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccCC-------CCcceEeCCCC
Confidence 0 011111100000000 000000000 000111235677777652 34568999999
Q ss_pred EEEEEEEecCCCCeEEEEEcCceeeEEEecCccc---------------------------ceeEecEEEeCCCceEEEE
Q 009854 185 TYMLRLINAALNEELFFKIAGHKLTVVEVDAAYV---------------------------KPFKTETVLIAPGQTTNVL 237 (524)
Q Consensus 185 ~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~---------------------------~P~~~d~v~l~pgeR~dv~ 237 (524)
+++|.|.|.+ ...|+||||||.|+||+.+|... ++-+.|||.|.+|+.+.|.
T Consensus 481 ~~~w~i~N~~-~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~ 559 (612)
T 3gyr_A 481 HEQWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVM 559 (612)
T ss_dssp EEEEEEEECS-SSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEE
T ss_pred EEEEEEEcCC-CCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEE
Confidence 9999999998 67899999999999999876421 1235799999999999999
Q ss_pred EEeCCCCCceEEEEeeC
Q 009854 238 LSAAHATGKYLVAASPF 254 (524)
Q Consensus 238 v~~~~~~g~~~~~~~~~ 254 (524)
+++...||.|.+|||..
T Consensus 560 ~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 560 GKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EECCSCCEEEEEEESSH
T ss_pred EEeCCCCcceEEcCCCh
Confidence 99655689999999964
No 71
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.31 E-value=4.8e-12 Score=125.87 Aligned_cols=100 Identities=21% Similarity=0.333 Sum_probs=81.5
Q ss_pred EEEcCcC--CCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCC--------ccccccCCCCCceEEEEEe
Q 009854 14 VTVNGYF--PGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPA--------YITQCPIQPGQNYIYNFTL 83 (524)
Q Consensus 14 ~~~NG~~--pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~--------~~~q~~i~PG~~~~y~~~~ 83 (524)
|+|||+. ..|.|++++||+|+++|.|.....+.+|+||...... .+|.. ......|.||++++|.|+.
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 6899986 3589999999999999999999999999999875443 34421 1133568999999999996
Q ss_pred --CCcccceeeccChHHHH-hhceeeEEEcCCCCC
Q 009854 84 --AGQRGTLWWHAHILWLR-ATVHGAIVILPKRGV 115 (524)
Q Consensus 84 --~~~~Gt~wyH~H~~~~~-~Gl~G~~iV~~~~~~ 115 (524)
.+.+|+|+||||..... .||.|.++|.+++..
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~ 310 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 310 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCC
Confidence 26799999999987665 899999999987653
No 72
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.31 E-value=3.1e-12 Score=111.62 Aligned_cols=95 Identities=20% Similarity=0.162 Sum_probs=66.2
Q ss_pred ccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCC------CCccc-cccCCCCC--ceEEEE
Q 009854 11 KPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADG------PAYIT-QCPIQPGQ--NYIYNF 81 (524)
Q Consensus 11 ~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG------~~~~~-q~~i~PG~--~~~y~~ 81 (524)
.+-+.++|. ++|+|+|++||+|+++++|... ...|.+.+......+.+. ..+.. ...|.||+ +.+|+|
T Consensus 50 ~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tf 126 (154)
T 2cal_A 50 FPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTW 126 (154)
T ss_dssp SSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEE
T ss_pred cccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEE
Confidence 333445555 4699999999999999999732 335555555433332210 00000 02689999 999999
Q ss_pred EeCCcccceeeccChHHHH-hhceeeEEEc
Q 009854 82 TLAGQRGTLWWHAHILWLR-ATVHGAIVIL 110 (524)
Q Consensus 82 ~~~~~~Gt~wyH~H~~~~~-~Gl~G~~iV~ 110 (524)
++ ++|+||||||..+.. +||.|.|+|+
T Consensus 127 t~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 127 HP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp CC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 85 899999999987666 8999999985
No 73
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.29 E-value=3.6e-12 Score=105.51 Aligned_cols=90 Identities=20% Similarity=0.150 Sum_probs=71.3
Q ss_pred CccccE-EEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCc
Q 009854 8 CSTKPI-VTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQ 86 (524)
Q Consensus 8 g~~~~~-~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~ 86 (524)
|..... ..+|++++++.|++++||+|+++++|.... +||+.... .|. +..+.||++++|.|++ ++
T Consensus 22 ~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~----~~~i~pG~~~~~~f~~-~~ 87 (112)
T 1iby_A 22 GVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV----QEVIKAGETKTISFTA-DK 87 (112)
T ss_dssp TEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE----EEEECTTCEEEEEEEC-CS
T ss_pred cEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc----eeEeCCCCEEEEEEEC-CC
Confidence 444444 488888988999999999999999999765 55554432 122 3569999999999997 78
Q ss_pred ccceeeccChHHHHhhceeeEEEcC
Q 009854 87 RGTLWWHAHILWLRATVHGAIVILP 111 (524)
Q Consensus 87 ~Gt~wyH~H~~~~~~Gl~G~~iV~~ 111 (524)
+|+||||||.+....+|.|.|+|.+
T Consensus 88 ~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 88 AGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp CEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred CEEEEEECCCCCchHHCEEEEEEeC
Confidence 9999999998765555999999964
No 74
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.22 E-value=1.6e-11 Score=128.41 Aligned_cols=95 Identities=21% Similarity=0.251 Sum_probs=73.9
Q ss_pred CccccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcc
Q 009854 8 CSTKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQR 87 (524)
Q Consensus 8 g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~ 87 (524)
+.+..+|++|+++++|+|++++||+|+++|+|.+...-. +||+.+.. .|+. ..+.||++++|.|++ +++
T Consensus 498 ~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv~----~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 498 KVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGVA----MEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp EEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTEE----EEECTTCEEEEEEEC-CSC
T ss_pred ccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCcc----eeeCCCCeEEEEEEC-CCC
Confidence 456778999999999999999999999999998653222 35555432 2221 569999999999998 799
Q ss_pred cceeeccCh-HHHH-hhceeeEEEcCCC
Q 009854 88 GTLWWHAHI-LWLR-ATVHGAIVILPKR 113 (524)
Q Consensus 88 Gt~wyH~H~-~~~~-~Gl~G~~iV~~~~ 113 (524)
|+||||||. .+.. .||.|.|+|++++
T Consensus 567 GtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 567 GVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp EEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred EEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 999999993 2211 5999999999763
No 75
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.17 E-value=3.2e-11 Score=103.81 Aligned_cols=95 Identities=14% Similarity=0.168 Sum_probs=71.0
Q ss_pred eEEEccCCCEEEEEEEcCCCCCCC-CCCeeecCcceEEE--------eecC-CCCCCCCCCCCCCCCCCCcCceeEecCC
Q 009854 400 RIYRLPYNSTVQLVLQDTGMIAPE-NHPLHLHGFNFFEV--------GRGL-GNFNSKKDPKKFNLVDPVERNTIGVPSG 469 (524)
Q Consensus 400 ~~~~~~~g~~v~~~i~n~~~~~~~-~HP~HlHG~~F~Vl--------~~g~-g~~~~~~~~~~~~~~~p~~rDTv~vpp~ 469 (524)
..+.++.|++|+|++.|.+ .. .|.||+|+....+. ..+. ..|.+.. ....++||..|.||
T Consensus 35 ~~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~-------~~~~~~~t~~l~pG 104 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD-------KSNIIAESPLANGN 104 (139)
T ss_dssp SEEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC-------CTTEEEECCCBCTT
T ss_pred CeEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccchhhhhhhhcccccccccCcc-------cccccccccccCCC
Confidence 3578899999999999964 45 79999998642111 0000 0111110 12246899999999
Q ss_pred cEEEEEEEeCCceeEEEEeechHhhhccceEEEEEc
Q 009854 470 GWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 470 g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
+...|.|.+++||.|.||||+..|.+ ||+..|+|+
T Consensus 105 et~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 105 ETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred CEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 99999999999999999999999999 999999884
No 76
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.14 E-value=1.3e-10 Score=94.71 Aligned_cols=80 Identities=20% Similarity=0.255 Sum_probs=64.1
Q ss_pred EcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccC
Q 009854 16 VNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAH 95 (524)
Q Consensus 16 ~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H 95 (524)
-+.++..+.|++++||+|++ +|....++++|+++. .||.....+..+.||++++|.| .++|+|||||+
T Consensus 26 ~~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~ 93 (105)
T 2ov0_A 26 AKMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCT 93 (105)
T ss_dssp ETTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECS
T ss_pred eecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeC
Confidence 45677779999999999655 699888999998852 3555444445689999999888 57999999998
Q ss_pred hHHHHhhceeeEEEc
Q 009854 96 ILWLRATVHGAIVIL 110 (524)
Q Consensus 96 ~~~~~~Gl~G~~iV~ 110 (524)
.|. ||.|.|+|+
T Consensus 94 ~H~---gM~G~i~V~ 105 (105)
T 2ov0_A 94 PHP---FMRGKVVVE 105 (105)
T ss_dssp SCT---TCEEEEEEC
T ss_pred CCC---CCEEEEEEC
Confidence 875 999999985
No 77
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.12 E-value=1.2e-10 Score=95.13 Aligned_cols=86 Identities=15% Similarity=0.157 Sum_probs=65.2
Q ss_pred eEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEe-
Q 009854 400 RIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRA- 478 (524)
Q Consensus 400 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a- 478 (524)
..+.++.|++|+|+ |.. ...|++|+||..|... .|. + .+....++..|.||+...++|.+
T Consensus 19 ~~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~---~g~-~----------~~~~~~~~~~i~pG~~~~~~f~~~ 79 (105)
T 3cvb_A 19 ANVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA---SKE-L----------ADKLSHSQLMFSPGESYEITFSSD 79 (105)
T ss_dssp SEEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG---CHH-H----------HHHHCEEEEECSTTCEEEEEECTT
T ss_pred CEEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc---ccc-c----------cccccccccccCCCCeEEEEEecC
Confidence 35788999999874 643 5689999999765321 000 0 00012578899999999999998
Q ss_pred CCceeEEEEeechHhhhccceEEEEEcC
Q 009854 479 DNPGVWFMHCHLEVHTTWGLKMAFIVDN 506 (524)
Q Consensus 479 dnpG~w~~HCHil~H~d~GM~~~~~V~~ 506 (524)
+.||.|.|||| .|...||+..|.|++
T Consensus 80 ~~~G~y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 80 FPAGTYTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp SCSEEEEEECT--TTGGGTCEEEEEECC
T ss_pred CCCeeEEEEeC--CchhcCCEEEEEEcC
Confidence 79999999999 799999999999863
No 78
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.94 E-value=1.9e-09 Score=87.99 Aligned_cols=84 Identities=15% Similarity=0.142 Sum_probs=61.4
Q ss_pred CcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCC----ccccccCCCCCceEEEEEeCCcccceeeccChH
Q 009854 22 GPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPA----YITQCPIQPGQNYIYNFTLAGQRGTLWWHAHIL 97 (524)
Q Consensus 22 gP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~----~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~ 97 (524)
.+.|++++||+|++ +|....++++|+|+...+. .+|.. ..+...+.||++++|.|+++.++|+|||||| .
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-~ 92 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-P 92 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-T
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-C
Confidence 37999999998755 5887778899988765421 12210 0122458999999999975468999999999 2
Q ss_pred HHHhhceeeEEEcC
Q 009854 98 WLRATVHGAIVILP 111 (524)
Q Consensus 98 ~~~~Gl~G~~iV~~ 111 (524)
...+||.|.|+|++
T Consensus 93 H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 93 HRGAGMVGKITVAG 106 (106)
T ss_dssp TGGGTCEEEEEECC
T ss_pred hhhcCcEEEEEEcC
Confidence 23379999999963
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.88 E-value=8.6e-09 Score=88.48 Aligned_cols=91 Identities=11% Similarity=0.027 Sum_probs=65.8
Q ss_pred cCCCcEEEEecCCEEEEEEEeCCCC-CceEEecCccc-----------------cCCCCCCCCCccccccCCCCCceEEE
Q 009854 19 YFPGPTIVAREDDTVLVKVVNHVKY-NVSIHWHGVRQ-----------------LRTCWADGPAYITQCPIQPGQNYIYN 80 (524)
Q Consensus 19 ~~pgP~i~~~~Gd~v~v~l~N~l~~-~~~iH~HG~~~-----------------~~~~~~DG~~~~~q~~i~PG~~~~y~ 80 (524)
+|-.+.|++++||+|+++|+|.... +++++.++... ...+..+.........|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4545799999999999999999877 88888887431 00000110000011348999999999
Q ss_pred EEeCCcccceeeccChHHHHhhceeeEEEc
Q 009854 81 FTLAGQRGTLWWHAHILWLRATVHGAIVIL 110 (524)
Q Consensus 81 ~~~~~~~Gt~wyH~H~~~~~~Gl~G~~iV~ 110 (524)
|++ +++|+|+||||..+...||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 997 68999999999765444999999984
No 80
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.84 E-value=6.8e-09 Score=84.68 Aligned_cols=84 Identities=14% Similarity=0.184 Sum_probs=62.0
Q ss_pred EEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEe-C
Q 009854 401 IYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRA-D 479 (524)
Q Consensus 401 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a-d 479 (524)
.+.++.|++|+|+ |.+ ...|++|+|+..+.. . .|. + . ....+|++.+.||+...+.|.+ +
T Consensus 21 ~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~--~-~g~-~----~------~~~~~~~~~~~pG~~~~~~f~~~~ 81 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA--K-SAD-L----A------KSLSHKQLLMSPGQSTSTTFPADA 81 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT--C-CHH-H----H------HHHCBCSCCCSTTCEEEEECCTTC
T ss_pred EEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc--c-ccc-c----c------hhccccceeeCCCCEEEEEEecCC
Confidence 5688999999986 532 468999999764310 0 000 0 0 0001467789999999999888 8
Q ss_pred CceeEEEEeechHhhhccceEEEEEc
Q 009854 480 NPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 480 npG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
.||.|.|||| .|.+.||+..+.|+
T Consensus 82 ~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 82 PAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCceEEEEeC--ChhhcCcEEEEEEc
Confidence 9999999999 89999999999986
No 81
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.76 E-value=1.7e-08 Score=81.22 Aligned_cols=86 Identities=10% Similarity=0.097 Sum_probs=66.9
Q ss_pred cccEEEEcCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccc
Q 009854 10 TKPIVTVNGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGT 89 (524)
Q Consensus 10 ~~~~~~~NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt 89 (524)
...+-.-|..|-...|++++||+|+++++|.....+++...+.... ..+.||++.++.|+. +++|+
T Consensus 15 ~v~V~~~~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~ 80 (100)
T 4hci_A 15 VIEVELNDDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGT 80 (100)
T ss_dssp CEEEEEETTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEE
T ss_pred EEEEEEECCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCce
Confidence 3444445677755699999999999999999877777766554322 237899999999997 89999
Q ss_pred eeeccChHHHHhhceeeEEEc
Q 009854 90 LWWHAHILWLRATVHGAIVIL 110 (524)
Q Consensus 90 ~wyH~H~~~~~~Gl~G~~iV~ 110 (524)
|.|+|..|. ..||.|.|+|+
T Consensus 81 Y~y~C~~H~-~~gM~G~i~Ve 100 (100)
T 4hci_A 81 YELICRYHL-LKGMEGKVIVK 100 (100)
T ss_dssp EEEECTTTG-GGTCEEEEEEC
T ss_pred EEEECcccc-CCCCEEEEEEC
Confidence 999997432 26999999996
No 82
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.70 E-value=3.2e-08 Score=85.03 Aligned_cols=98 Identities=19% Similarity=0.205 Sum_probs=70.2
Q ss_pred EEEccCCCEEEEEEEcCCCCCCCCCCeeecCc--ceEEE-eec--CC---CCCCCCCCCCCCCCCCCcCceeEecCCcEE
Q 009854 401 IYRLPYNSTVQLVLQDTGMIAPENHPLHLHGF--NFFEV-GRG--LG---NFNSKKDPKKFNLVDPVERNTIGVPSGGWT 472 (524)
Q Consensus 401 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~--~F~Vl-~~g--~g---~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v 472 (524)
.+.++.|++|+|++.|.+. ....|.||++.. .+.-+ ..+ .+ .|-+.. -....+++|..|.||...
T Consensus 34 ~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~~ 106 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGESG 106 (140)
T ss_dssp EEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEEE
T ss_pred eEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCcee
Confidence 5788999999999999321 257899999842 12100 000 00 010000 011246789999999999
Q ss_pred EEEEEeCCceeEEEEeechHhhhccceEEEEEc
Q 009854 473 AIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 473 ~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
.+.|.++.||.|.|||++..|...||...+.|.
T Consensus 107 ~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 107 SVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999999986
No 83
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.63 E-value=7.2e-08 Score=77.24 Aligned_cols=80 Identities=18% Similarity=0.215 Sum_probs=57.9
Q ss_pred cEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCC-CccccccCCCCCceEEEEEeCCcccceeeccChHHHHh
Q 009854 23 PTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGP-AYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRA 101 (524)
Q Consensus 23 P~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~-~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~~~~~ 101 (524)
+.|++++||+|+ |+|....++++|+++...+.. .|.. ...+...+.||++++++|. ++|+|+|||+.| ..+
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~~H-~~~ 89 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCEPH-QGA 89 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGGG-GGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEeC---CCeEEEEEcCCc-ccc
Confidence 799999999876 578887899999998643211 1110 0001235899999998873 799999999933 336
Q ss_pred hceeeEEEc
Q 009854 102 TVHGAIVIL 110 (524)
Q Consensus 102 Gl~G~~iV~ 110 (524)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 2plt_A 90 GMVGKIIVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
No 84
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.59 E-value=1.7e-07 Score=80.42 Aligned_cols=92 Identities=15% Similarity=0.141 Sum_probs=65.5
Q ss_pred cCCCcEEEEecCCEEEEEEEe--CCCCCceEEecCcc------------c----cCCCCCCCCCc-cccccCCCCCceEE
Q 009854 19 YFPGPTIVAREDDTVLVKVVN--HVKYNVSIHWHGVR------------Q----LRTCWADGPAY-ITQCPIQPGQNYIY 79 (524)
Q Consensus 19 ~~pgP~i~~~~Gd~v~v~l~N--~l~~~~~iH~HG~~------------~----~~~~~~DG~~~-~~q~~i~PG~~~~y 79 (524)
+|-.+.|++++||+|+++|+| .....++++.+... . ...+..|.... .....|.||++.++
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEE
Confidence 565579999999999999999 66778888877321 0 00000011000 00134899999999
Q ss_pred EEEeCCcccceeeccChHHHH-hhceeeEEEcC
Q 009854 80 NFTLAGQRGTLWWHAHILWLR-ATVHGAIVILP 111 (524)
Q Consensus 80 ~~~~~~~~Gt~wyH~H~~~~~-~Gl~G~~iV~~ 111 (524)
.|++ +++|+|||||+..+.. .||.|.|+|.+
T Consensus 109 ~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 109 TFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9998 7899999999986554 79999999964
No 85
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.56 E-value=1.9e-07 Score=74.75 Aligned_cols=78 Identities=14% Similarity=0.201 Sum_probs=58.6
Q ss_pred EEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCc-CceeEecCCcEEEEEEEeC
Q 009854 401 IYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVE-RNTIGVPSGGWTAIRFRAD 479 (524)
Q Consensus 401 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~-rDTv~vpp~g~v~irf~ad 479 (524)
.+.++.|++|+|+ |.+ ...|.+|+++..+- +. ..+.+ +|+..+.||+...+.| +
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~----------------~~~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--AD----------------TAAKLSHKGLLFAAGESFTSTF--T 74 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HH----------------HHHHHCEEEEECSTTCEEEEEC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--cc----------------ccccccccccccCCCCEEEEEc--C
Confidence 5788999999987 532 46799999864221 00 00011 5788899999888866 7
Q ss_pred CceeEEEEeechHhhhccceEEEEEc
Q 009854 480 NPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 480 npG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
.||.|.|||+ .|.+.||...+.|+
T Consensus 75 ~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 75 EPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 8999999999 79999999999884
No 86
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.54 E-value=2e-07 Score=74.67 Aligned_cols=80 Identities=16% Similarity=0.230 Sum_probs=59.3
Q ss_pred EEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeCC
Q 009854 401 IYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADN 480 (524)
Q Consensus 401 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 480 (524)
.+.++.|++|+| .|.+ ...|.+|+|+..+ ...++. ...++|+..+.||+...++| +.
T Consensus 19 ~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~------p~~~~~----------~~~~~~~~~~~pG~~~~~tf--~~ 75 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNA---GFPHNIVFDEDAI------PSGVNA----------DAISRDDYLNAPGETYSVKL--TA 75 (98)
T ss_dssp EEEECTTCEEEE--EECS---SCCEEEEECGGGS------CTTCCH----------HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCC------CCcccc----------ccccccceecCCCCEEEEEe--CC
Confidence 578899999998 4533 4689999997522 000000 00246889999999888866 58
Q ss_pred ceeEEEEeechHhhhccceEEEEEc
Q 009854 481 PGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 481 pG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
||.|.|||| .|.+.||...+.|+
T Consensus 76 ~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 76 AGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 79999999999884
No 87
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.54 E-value=1.6e-07 Score=75.14 Aligned_cols=81 Identities=16% Similarity=0.141 Sum_probs=56.6
Q ss_pred CcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccChHHHHh
Q 009854 22 GPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRA 101 (524)
Q Consensus 22 gP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~~~~~ 101 (524)
.+.|++++||+|++ .|....+++++.++...+... .++.. .....+.||++++++| .++|+|+|||+.| ..+
T Consensus 18 P~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGA 89 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTT
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-ccc
Confidence 37999999998765 487777899998875432000 00000 1123589999999887 4799999999933 237
Q ss_pred hceeeEEEc
Q 009854 102 TVHGAIVIL 110 (524)
Q Consensus 102 Gl~G~~iV~ 110 (524)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999985
No 88
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.50 E-value=2.9e-07 Score=72.54 Aligned_cols=72 Identities=19% Similarity=0.335 Sum_probs=56.6
Q ss_pred EEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeCC
Q 009854 401 IYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADN 480 (524)
Q Consensus 401 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 480 (524)
.+.++.|++|+|+ |.+ ...|.+|+++.. +...++..+.||+...+.| +.
T Consensus 20 ~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f--~~ 68 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNK---LAPHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF--SE 68 (91)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--CC
Confidence 5688999999986 432 467999988720 0114677889998877766 88
Q ss_pred ceeEEEEeechHhhhccceEEEEEc
Q 009854 481 PGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 481 pG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
||.|.|||+ .|...||...+.|+
T Consensus 69 ~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 69 PGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEEEEeC--CCccCCCEEEEEEC
Confidence 999999999 89999999999884
No 89
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.48 E-value=2.9e-07 Score=76.94 Aligned_cols=76 Identities=14% Similarity=0.112 Sum_probs=52.8
Q ss_pred cEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccChHHHHhh
Q 009854 23 PTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT 102 (524)
Q Consensus 23 P~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~~~~~G 102 (524)
+.|++++||+|++.+.|. ++++..+... +-||.. ...+.||++++|+| +.+|+|||||..| ..+|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~~-----~P~g~~---~f~s~pGet~s~TF---~~pG~y~y~C~~H-~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKGG-----APEGAE---TWKGKINEEITVTL---SKPGVYMYQCAPH-VGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTTC-----SCTTCC---CCBCCTTCCCEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccCc-----CCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 799999999987766653 4444333211 112221 13357999998888 5789999999854 3489
Q ss_pred ceeeEEEcCCC
Q 009854 103 VHGAIVILPKR 113 (524)
Q Consensus 103 l~G~~iV~~~~ 113 (524)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999764
No 90
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.44 E-value=3.7e-07 Score=71.91 Aligned_cols=74 Identities=23% Similarity=0.237 Sum_probs=55.0
Q ss_pred CcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccChHHHHh
Q 009854 22 GPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRA 101 (524)
Q Consensus 22 gP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~~~~~ 101 (524)
.+.|++++||+|++ .|.....++++.++.. ++. .....+.||+++++.| +++|+|||||+.+ ..+
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~~-----~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H-~~~ 82 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP----ELS-----HKDLAFSPGETFEATF---SEPGTYTYYCEPH-RGA 82 (91)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEETTCG----GGC-----EEEEECSTTCEEEEEC---CSCEEEEEECTTT-GGG
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCC----ccC-----cccceeCCCCEEEEEe---CCCEEEEEEeCCC-ccC
Confidence 47999999999865 5876778889888731 000 1123588999988877 5799999999943 235
Q ss_pred hceeeEEEc
Q 009854 102 TVHGAIVIL 110 (524)
Q Consensus 102 Gl~G~~iV~ 110 (524)
||.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999984
No 91
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.43 E-value=1.5e-07 Score=75.21 Aligned_cols=78 Identities=15% Similarity=0.325 Sum_probs=58.1
Q ss_pred EEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeCC
Q 009854 401 IYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADN 480 (524)
Q Consensus 401 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 480 (524)
.+.++.|++|+|+ |.+ ...|.+++++..+ ..+ . ....+++..+.||+...+.| +.
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~-----~~~-------~------~~~~~~~~~~~~g~~~~~tf--~~ 74 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNK---VGPHNVIFDKVPA-----GES-------A------PALSNTKLAIAPGSFYSVTL--GT 74 (97)
T ss_dssp EEEECTTCEEEEE--ECS---SCCCCBEEEECCT-----TSC-------H------HHHCBCCCCCSCSCCEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCCCC-----ccc-------c------ccccccceecCCCCEEEEEe--CC
Confidence 5688999999887 532 4689999986543 000 0 00014677888998887766 89
Q ss_pred ceeEEEEeechHhhhccceEEEEEc
Q 009854 481 PGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 481 pG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
||.|.|||+ .|.+.||...+.|+
T Consensus 75 ~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 75 PGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CSEEEEECS--STTTTTCEEEEEEC
T ss_pred CeEEEEEcc--ChhhcCCEEEEEEC
Confidence 999999999 89999999999884
No 92
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.42 E-value=6.1e-07 Score=74.57 Aligned_cols=75 Identities=8% Similarity=0.052 Sum_probs=52.4
Q ss_pred cEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccChHHHHhh
Q 009854 23 PTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT 102 (524)
Q Consensus 23 P~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~~~~~G 102 (524)
..|++++||+|++.+.|. ++++..+.. .+-+|.. ...+.||++++|+| +++|+|||+|-.| ..+|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~-----~~P~g~~---~f~~~pg~t~s~TF---~~pG~y~y~C~~H-~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE-----ILPEGVE---SFKSKINESYTLTV---TEPGLYGVKCTPH-FGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT-----SSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC-----cCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 699999999988877762 344333321 1123321 13367999999888 4789999999843 2379
Q ss_pred ceeeEEEcCC
Q 009854 103 VHGAIVILPK 112 (524)
Q Consensus 103 l~G~~iV~~~ 112 (524)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999864
No 93
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.42 E-value=5e-07 Score=72.10 Aligned_cols=77 Identities=21% Similarity=0.215 Sum_probs=54.9
Q ss_pred cEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCc--cccccCCCCCceEEEEEeCCcccceeeccChHHHH
Q 009854 23 PTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAY--ITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLR 100 (524)
Q Consensus 23 P~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~--~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~~~~ 100 (524)
+.|++++||+| +|.|....+++++.++.... +|... .....+.||+++++.| .++|+|+|||+.| ..
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H-~~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPH-RG 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSST-TT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccCh-hh
Confidence 79999999986 55587666788887765431 11000 0113488999999887 5799999999933 23
Q ss_pred hhceeeEEEc
Q 009854 101 ATVHGAIVIL 110 (524)
Q Consensus 101 ~Gl~G~~iV~ 110 (524)
+||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 6999999984
No 94
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.41 E-value=4.8e-07 Score=72.98 Aligned_cols=78 Identities=12% Similarity=0.063 Sum_probs=54.5
Q ss_pred CcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCC-------CCCcc--ccccCCCCCceEEEEEeCCcccceee
Q 009854 22 GPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWAD-------GPAYI--TQCPIQPGQNYIYNFTLAGQRGTLWW 92 (524)
Q Consensus 22 gP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~D-------G~~~~--~q~~i~PG~~~~y~~~~~~~~Gt~wy 92 (524)
.+.|++++||+|+ |.|....+++++++.-. . .+ ..+++ +...+.||+++++.| .++|+|+|
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y 85 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIPA----G-APGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTF 85 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCCT----T-CCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEE
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCcc----c-ccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEE
Confidence 3799999999976 55887677887776311 0 11 00111 123489999998877 57999999
Q ss_pred ccChHHHHhhceeeEEEc
Q 009854 93 HAHILWLRATVHGAIVIL 110 (524)
Q Consensus 93 H~H~~~~~~Gl~G~~iV~ 110 (524)
||+ ....+||.|.|+|+
T Consensus 86 ~C~-~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 86 YCT-PHKSANMKGTLTVK 102 (102)
T ss_dssp ECS-TTGGGTCEEEEEEC
T ss_pred EeC-CCcccCCeEEEEEC
Confidence 999 22337999999985
No 95
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.41 E-value=8.3e-07 Score=72.89 Aligned_cols=74 Identities=19% Similarity=0.332 Sum_probs=57.3
Q ss_pred EEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeCC
Q 009854 401 IYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADN 480 (524)
Q Consensus 401 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 480 (524)
.+.++.|+.++|.+.|.. ...|-|++... .-+..+.||+...+.|.++.
T Consensus 39 ~i~v~~G~~V~~~~~n~d---~~~H~~~i~~~----------------------------~~~~~i~pG~~~~~~f~~~~ 87 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKS---PISEGFSIDAF----------------------------GVQEVIKAGETKTISFTADK 87 (112)
T ss_dssp EEEEETTCEEEEEEEECS---SSCEEEEEGGG----------------------------TEEEEECTTCEEEEEEECCS
T ss_pred EEEEeCCCEEEEEEEECC---CCeEEEEEcCC----------------------------CceeEeCCCCEEEEEEECCC
Confidence 578899999999999953 23444433321 11567899999999999999
Q ss_pred ceeEEEEeechHhhhccceEEEEEcC
Q 009854 481 PGVWFMHCHLEVHTTWGLKMAFIVDN 506 (524)
Q Consensus 481 pG~w~~HCHil~H~d~GM~~~~~V~~ 506 (524)
||.|.||||+..|... |...++|++
T Consensus 88 ~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 88 AGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp CEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CEEEEEECCCCCchHH-CEEEEEEeC
Confidence 9999999999887554 999998863
No 96
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.38 E-value=1.3e-06 Score=70.06 Aligned_cols=72 Identities=22% Similarity=0.460 Sum_probs=57.8
Q ss_pred EEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeCC
Q 009854 401 IYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADN 480 (524)
Q Consensus 401 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 480 (524)
.+.++.|++|+|++.|.+ ...|.|.+.+..+ ...+.||....+.|+++.
T Consensus 29 ~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~~~ 77 (100)
T 4hci_A 29 VITIPINESTTLLLKNKG---KSEHTFTIKKLGI----------------------------DVVVESGKEKNITVKPKS 77 (100)
T ss_dssp EEEECTTSCEEEEEEECS---SSCEEEEEGGGTE----------------------------EEEECTTCEEEEEECCCS
T ss_pred EEEECCCCEEEEEEEcCC---CceEEEEEecCCc----------------------------ceeecCCcceeEEEeccc
Confidence 578999999999999954 3456666544322 235678888999999999
Q ss_pred ceeEEEEeechHhhhccceEEEEEc
Q 009854 481 PGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 481 pG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
||.|.|+|. .|...||...++|+
T Consensus 78 ~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 78 AGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CceEEEECc--cccCCCCEEEEEEC
Confidence 999999996 59999999999885
No 97
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.38 E-value=1.2e-06 Score=70.09 Aligned_cols=77 Identities=12% Similarity=0.156 Sum_probs=55.8
Q ss_pred cEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCc------cccccCCCCCceEEEEEeCCcccceeeccCh
Q 009854 23 PTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAY------ITQCPIQPGQNYIYNFTLAGQRGTLWWHAHI 96 (524)
Q Consensus 23 P~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~------~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~ 96 (524)
..|++++||+|+ |+|....++++++++...+ +|... .....+.||+++++.| .++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f---~~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKIT--FKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEe---CCCcEEEEEcCC
Confidence 689999999864 5788777888888875321 22110 1113478999998887 379999999993
Q ss_pred HHHHhhceeeEEEc
Q 009854 97 LWLRATVHGAIVIL 110 (524)
Q Consensus 97 ~~~~~Gl~G~~iV~ 110 (524)
| ..+||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 H-AGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred c-cccCCEEEEEEC
Confidence 2 336999999984
No 98
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.38 E-value=6.8e-07 Score=74.16 Aligned_cols=75 Identities=8% Similarity=-0.062 Sum_probs=52.4
Q ss_pred cEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccChHHHHhh
Q 009854 23 PTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT 102 (524)
Q Consensus 23 P~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~~~~~G 102 (524)
..|++++||+|++. |.. .++++..+.... -+|. ....+.||++++|+| +.+|+|+|||-.| ..+|
T Consensus 22 ~~i~V~~GDTV~f~--n~~-~~Hnv~~~~~~~-----p~g~---~~~~~~pg~t~s~TF---~~~G~y~Y~C~~H-~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKFV--PTD-KSHNAESVREVW-----PEGV---APVKGGFSKEVVFNA---EKEGLYVLKCAPH-YGMG 86 (124)
T ss_dssp SEEEECTTCEEEEE--CSS-SSCCCEECTTTS-----CTTS---CCCBCCTTCCEEEEC---CSSEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEE--ECC-CCccEEEeCCcC-----CCCc---cccccCCCCEEEEEe---CCCeEEEEEcCCC-CcCC
Confidence 79999999997655 543 466665553211 1222 113467999999888 4789999999633 2379
Q ss_pred ceeeEEEcCC
Q 009854 103 VHGAIVILPK 112 (524)
Q Consensus 103 l~G~~iV~~~ 112 (524)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999875
No 99
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.36 E-value=1.4e-06 Score=69.77 Aligned_cols=77 Identities=9% Similarity=0.120 Sum_probs=55.1
Q ss_pred cEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCc------cccccCCCCCceEEEEEeCCcccceeeccCh
Q 009854 23 PTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAY------ITQCPIQPGQNYIYNFTLAGQRGTLWWHAHI 96 (524)
Q Consensus 23 P~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~------~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~ 96 (524)
+.|++++||+|+ |+|....+++++.++...+ +|... .....+.||+++++.| .++|+|+|+|+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf---~~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEE---CCCceEEEEcCC
Confidence 799999999765 4788777888888764321 11100 1113478999998877 379999999993
Q ss_pred HHHHhhceeeEEEc
Q 009854 97 LWLRATVHGAIVIL 110 (524)
Q Consensus 97 ~~~~~Gl~G~~iV~ 110 (524)
| ..+||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 87 H-QGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred C-cccCCEEEEEEC
Confidence 3 237999999984
No 100
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.35 E-value=1.4e-06 Score=69.84 Aligned_cols=82 Identities=11% Similarity=0.162 Sum_probs=58.4
Q ss_pred EEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeCC
Q 009854 401 IYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADN 480 (524)
Q Consensus 401 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 480 (524)
.+.++.|++|+| .|.+ ...|.+|+++..|- . + ++.. .. ...+|++.+.||+...+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p---~--g-~~~~----~~----~~~~~~~~~~~G~~~~~~f--~~ 76 (99)
T 1byp_A 18 DLSIASGEKITF--KNNA---GFPHNDLFDKKEVP---A--G-VDVT----KI----SMPEEDLLNAPGEEYSVTL--TE 76 (99)
T ss_dssp EEEECTTEEEEE--EECS---SCCBCCEECTTSSC---T--T-CCHH----HH----SCCTTCCBCSTTCEEEEEE--CS
T ss_pred EEEECCCCEEEE--EECC---CCcceEEEeCCCCc---c--c-cccc----cc----cccccceeeCCCCEEEEEe--CC
Confidence 568899999988 4533 46899999975430 0 0 0000 00 0125677889999888866 58
Q ss_pred ceeEEEEeechHhhhccceEEEEEc
Q 009854 481 PGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 481 pG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
||.|.|||+ .|.+.||...+.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 77 KGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CcEEEEEcC--CccccCCEEEEEEC
Confidence 999999999 79999999999884
No 101
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.32 E-value=1.8e-06 Score=72.98 Aligned_cols=79 Identities=14% Similarity=0.172 Sum_probs=57.3
Q ss_pred cCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccCh
Q 009854 17 NGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHI 96 (524)
Q Consensus 17 NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~ 96 (524)
+..|-.+.|++++||+|++ +|....++++++.... +|........+.||++++|+| +++|+|+|+|-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4455557999999999865 5887777777764322 122122223588999999888 478999999977
Q ss_pred HHHHhhceeeEEEc
Q 009854 97 LWLRATVHGAIVIL 110 (524)
Q Consensus 97 ~~~~~Gl~G~~iV~ 110 (524)
|. ||.|.|+|+
T Consensus 122 H~---gM~G~I~V~ 132 (132)
T 3c75_A 122 HP---FMRGKVIVE 132 (132)
T ss_dssp CT---TCEEEEEEC
T ss_pred Cc---CCEEEEEEC
Confidence 64 999999985
No 102
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.25 E-value=1.7e-06 Score=69.62 Aligned_cols=85 Identities=14% Similarity=0.136 Sum_probs=57.7
Q ss_pred eEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCc-CceeEecCCcEEEEEEEe
Q 009854 400 RIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVE-RNTIGVPSGGWTAIRFRA 478 (524)
Q Consensus 400 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~-rDTv~vpp~g~v~irf~a 478 (524)
..+.++.|++|+|+ |.+ ...|.++++.-... .+.+... . ..+.+ .+++.+.||+...+.|
T Consensus 17 ~~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~~~-----~~~~~~~------~-~~~~~~~~~~~~~pG~~~~~tf-- 77 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVG---ETGHNIVFDIPAGA-----PGTVASE------L-KAASMDENDLLSEDEPSFKAKV-- 77 (102)
T ss_dssp SEEEECTTCCEEEE--ECS---SSCBCCEECCCTTC-----CHHHHHH------H-HHTSCCTTCCBBTTBCEEEECC--
T ss_pred CEEEECCCCEEEEE--ECC---CCCeEEEEeCcccc-----cccccch------h-hcccccccceecCCCCEEEEEe--
Confidence 35788999999986 532 45799998721000 0000000 0 00122 4677889999888766
Q ss_pred CCceeEEEEeechHhhhccceEEEEEc
Q 009854 479 DNPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 479 dnpG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
+.||.|.|||+ .|.+.||...++|+
T Consensus 78 ~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 78 STPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp CSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 89999999999 99999999999884
No 103
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.20 E-value=5e-06 Score=67.35 Aligned_cols=79 Identities=14% Similarity=0.178 Sum_probs=54.9
Q ss_pred cCcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccCh
Q 009854 17 NGYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHI 96 (524)
Q Consensus 17 NG~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~ 96 (524)
+..|-...|++++||+|++ .|....++++....... |........+.||+++++.| .++|+|+|+|-.
T Consensus 28 ~~~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~ 95 (106)
T 1id2_A 28 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 4455447999999999865 48766666665543221 11011112478999998888 478999999987
Q ss_pred HHHHhhceeeEEEc
Q 009854 97 LWLRATVHGAIVIL 110 (524)
Q Consensus 97 ~~~~~Gl~G~~iV~ 110 (524)
|. ||.|.|+|+
T Consensus 96 H~---~M~G~I~V~ 106 (106)
T 1id2_A 96 HP---FMRGKVIVE 106 (106)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 64 999999984
No 104
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.19 E-value=6.1e-06 Score=69.11 Aligned_cols=92 Identities=9% Similarity=-0.018 Sum_probs=60.2
Q ss_pred cCCCcEEEEecC-CEEEEEEEeCCCCC-----ceE--EecCccc-------------cCCCCCCC-CCccccccCCCCCc
Q 009854 19 YFPGPTIVARED-DTVLVKVVNHVKYN-----VSI--HWHGVRQ-------------LRTCWADG-PAYITQCPIQPGQN 76 (524)
Q Consensus 19 ~~pgP~i~~~~G-d~v~v~l~N~l~~~-----~~i--H~HG~~~-------------~~~~~~DG-~~~~~q~~i~PG~~ 76 (524)
+|--..|.|++| |+|+|+|+|....+ +++ --+|... .-.+..|. +-..+ ..|.||++
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t-~~l~pGet 92 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFT-PIIGGGEK 92 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEEC-CCBCTTCE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeee-eEECCCCE
Confidence 343359999999 99999999986543 333 2233110 00000111 10111 24799999
Q ss_pred eEEEEEeC--CcccceeeccChHHHHhhceeeEEEcC
Q 009854 77 YIYNFTLA--GQRGTLWWHAHILWLRATVHGAIVILP 111 (524)
Q Consensus 77 ~~y~~~~~--~~~Gt~wyH~H~~~~~~Gl~G~~iV~~ 111 (524)
.++.|+++ .++|+|||.|-..+.+.||.|.|+|.+
T Consensus 93 ~svtf~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 93 TSVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEEEEEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 99999972 289999999987665558999999963
No 105
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.17 E-value=5.9e-06 Score=68.69 Aligned_cols=76 Identities=16% Similarity=0.106 Sum_probs=49.8
Q ss_pred CcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccChHHHHh
Q 009854 22 GPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRA 101 (524)
Q Consensus 22 gP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~~~~~ 101 (524)
.+.|++++||+|++. |... ++++..+ ....-||... ....||++++|.| +.+|+|+|+|..| ..+
T Consensus 20 P~~i~V~~GdtV~f~--~~~~-~H~v~~~-----~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H-~~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVTFI--PVDK-GHNVESI-----KDMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPH-YAM 84 (123)
T ss_dssp SSEEEECTTCEEEEE--ESSS-SCCCEEC-----TTCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTT-GGG
T ss_pred CCEEEECCCCEEEEE--ECCC-CeEEEEe-----cccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCc-ccC
Confidence 379999999997654 4432 4444332 1111233211 2356999988877 4799999999743 227
Q ss_pred hceeeEEEcCC
Q 009854 102 TVHGAIVILPK 112 (524)
Q Consensus 102 Gl~G~~iV~~~ 112 (524)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999874
No 106
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.14 E-value=7e-06 Score=71.64 Aligned_cols=97 Identities=10% Similarity=0.020 Sum_probs=62.6
Q ss_pred EEEc-C-cCCCcEEEE-ecCCEEEEEEEeCCCCC-----ceEE--ecCccc------------cCCCCCCCCCccccccC
Q 009854 14 VTVN-G-YFPGPTIVA-REDDTVLVKVVNHVKYN-----VSIH--WHGVRQ------------LRTCWADGPAYITQCPI 71 (524)
Q Consensus 14 ~~~N-G-~~pgP~i~~-~~Gd~v~v~l~N~l~~~-----~~iH--~HG~~~------------~~~~~~DG~~~~~q~~i 71 (524)
+..+ + +|--..|.| +.||+|+|+|+|....+ +++- -+|... ...+..|..-......|
T Consensus 47 I~~~d~m~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l 126 (167)
T 3ay2_A 47 VESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLI 126 (167)
T ss_dssp EEECTTSCBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCB
T ss_pred EEeCCCceEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceee
Confidence 4444 4 554359999 99999999999987543 3322 222100 00000111000011248
Q ss_pred CCCCceEEEEEeCC--cccceeeccChHHHHhhceeeEEEcC
Q 009854 72 QPGQNYIYNFTLAG--QRGTLWWHAHILWLRATVHGAIVILP 111 (524)
Q Consensus 72 ~PG~~~~y~~~~~~--~~Gt~wyH~H~~~~~~Gl~G~~iV~~ 111 (524)
.||+++++.|++ . ++|+|||+|-..+.+.||.|.|+|.+
T Consensus 127 ~pGet~svtf~~-~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 127 GGGEESSLTLDP-AKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp CTTCEEEEEECG-GGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred CCCCEEEEEEec-CCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 999999999987 4 79999999987666669999999963
No 107
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.11 E-value=5.4e-06 Score=68.94 Aligned_cols=77 Identities=16% Similarity=0.227 Sum_probs=50.5
Q ss_pred CcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccChHHHHh
Q 009854 22 GPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRA 101 (524)
Q Consensus 22 gP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~~~~~ 101 (524)
.+.|++++||+|++ .|... ++++..+ ...+-||... ..+.||+++++.| +.+|+|+|+|..|. .+
T Consensus 20 P~~i~V~~GdtV~f--~n~~~-~H~v~~~-----~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~ 84 (123)
T 1pmy_A 20 PALVRLKPGDSIKF--LPTDK-GHNVETI-----KGMAPDGADY---VKTTVGQEAVVKF---DKEGVYGFKCAPHY-MM 84 (123)
T ss_dssp SSEEEECTTCEEEE--ECSSS-SCCCEEC-----TTSSCTTCCC---CBCCTTSCEEEEC---CSCEEEEEECSTTT-TT
T ss_pred CCEEEECCCCEEEE--EECCC-CcEEEEe-----cccCCCCccc---eecCCCCEEEEEe---CCCeEEEEEeCCcc-cc
Confidence 37999999999655 55533 4444332 1111233211 2367999988887 46999999997432 26
Q ss_pred hceeeEEEcCCC
Q 009854 102 TVHGAIVILPKR 113 (524)
Q Consensus 102 Gl~G~~iV~~~~ 113 (524)
||.|.|+|.++.
T Consensus 85 gM~G~I~V~~~~ 96 (123)
T 1pmy_A 85 GMVALVVVGDKR 96 (123)
T ss_dssp TCEEEEEESSCC
T ss_pred CCEEEEEEcCCC
Confidence 999999998653
No 108
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.10 E-value=9.3e-06 Score=64.76 Aligned_cols=78 Identities=12% Similarity=0.085 Sum_probs=54.3
Q ss_pred CcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCc----cccccCCCCCceEEEEEeCCcccceeeccChH
Q 009854 22 GPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAY----ITQCPIQPGQNYIYNFTLAGQRGTLWWHAHIL 97 (524)
Q Consensus 22 gP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~----~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~ 97 (524)
.+.|++++||+|++ .|....++++....-.. -+|... .+...+.||+++++.| .++|+|+|+|-.|
T Consensus 17 P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H 86 (98)
T 1iuz_A 17 PSKISVAAGEAIEF--VNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPH 86 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTT
T ss_pred CCEEEECCCCEEEE--EECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhh
Confidence 37999999998665 58766777777664211 122110 0112488999988887 5799999999864
Q ss_pred HHHhhceeeEEEc
Q 009854 98 WLRATVHGAIVIL 110 (524)
Q Consensus 98 ~~~~Gl~G~~iV~ 110 (524)
. .+||.|.|+|+
T Consensus 87 ~-~~gM~G~I~V~ 98 (98)
T 1iuz_A 87 A-GAGMKMTITVQ 98 (98)
T ss_dssp G-GGTCEEEEEEC
T ss_pred c-cCCCEEEEEEC
Confidence 2 26999999985
No 109
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.09 E-value=8.1e-06 Score=70.81 Aligned_cols=85 Identities=16% Similarity=0.301 Sum_probs=60.6
Q ss_pred eEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCce-------eEecCCc--
Q 009854 400 RIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNT-------IGVPSGG-- 470 (524)
Q Consensus 400 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDT-------v~vpp~g-- 470 (524)
+.+.++.|++|.+++.|.+ ....|-+-++.. +. .+.. .|...+. ..|.||+
T Consensus 61 p~i~V~~GD~V~~~~tN~~--~~~~H~~~i~~~-------~~-~~~~----------~~~~~~~~~~~~~~~~i~PG~sg 120 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTN--KGFGHSFDITKK-------GP-PYAV----------MPVIDPIVAGTGFSPVPKDGKFG 120 (154)
T ss_dssp CEEEECTTCEEEEEEEECC--TTCCCCCEEESC-------CS-CCCS----------SCCCCSEEEEBCCCCCCBTTBEE
T ss_pred CEEEEeCCCEEEEEEEcCC--CCeeeEEEEeec-------Cc-chhc----------cccccccccccccccccCCCCce
Confidence 4689999999999999953 134566555521 10 1100 0001111 2678999
Q ss_pred EEEEEEEeCCceeEEEEeechHhhhccceEEEEEc
Q 009854 471 WTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 471 ~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
...+.|++ .||.|.||||+-.|...||-..++|+
T Consensus 121 t~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 121 YTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 89999999 99999999999999999999999874
No 110
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.06 E-value=6.1e-06 Score=65.97 Aligned_cols=83 Identities=11% Similarity=0.162 Sum_probs=57.4
Q ss_pred eEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeC
Q 009854 400 RIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRAD 479 (524)
Q Consensus 400 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 479 (524)
..+.++.|++|+| .|.+ ...|.++++...+- .+ .+ ... ....++.+.+.||+...+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p-----~~-~~------~~~--~~~~~~~~~~~~G~~~~~tf--~ 75 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP-----SG-VD------ASK--ISMSEEDLLNAKGETFEVAL--S 75 (99)
T ss_dssp SEEEECTTCEEEE--EECS---SCCBCCEECTTSSC-----TT-CC------HHH--HCCCTTCCBCSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCCc-----cc-cc------ccc--cccccCccccCCCCEEEEEE--C
Confidence 3578899999988 4532 46899998864320 00 00 000 00124557788999887766 6
Q ss_pred CceeEEEEeechHhhhccceEEEEEc
Q 009854 480 NPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 480 npG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
.||.|.|||+ .|...||...+.|+
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 76 NKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCceEEEEcC--CCcccCCEEEEEEC
Confidence 8999999999 79999999999884
No 111
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.03 E-value=3e-05 Score=64.87 Aligned_cols=92 Identities=12% Similarity=0.051 Sum_probs=59.5
Q ss_pred cCCCcEEEE-ecCCEEEEEEEeCCCCC-----ceEE--ecCccc-------------cCCCCCCCCCccccccCCCCCce
Q 009854 19 YFPGPTIVA-REDDTVLVKVVNHVKYN-----VSIH--WHGVRQ-------------LRTCWADGPAYITQCPIQPGQNY 77 (524)
Q Consensus 19 ~~pgP~i~~-~~Gd~v~v~l~N~l~~~-----~~iH--~HG~~~-------------~~~~~~DG~~~~~q~~i~PG~~~ 77 (524)
+|--..|.| ++||+|+|+|+|....+ +++- -+|... .-.+..|..-......|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 443359999 99999999999987543 4433 222100 00000111000011247999999
Q ss_pred EEEEEeCC--cccc-eeeccChHHHHhhceeeEEEcC
Q 009854 78 IYNFTLAG--QRGT-LWWHAHILWLRATVHGAIVILP 111 (524)
Q Consensus 78 ~y~~~~~~--~~Gt-~wyH~H~~~~~~Gl~G~~iV~~ 111 (524)
++.|++ . ++|+ |||.|-..+.+.||.|.|+|.+
T Consensus 94 svtf~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDV-SKIAAGENYAYFCSFPGHWAMMKGTLKLGS 129 (129)
T ss_dssp EEEEEG-GGSCTTCCEEEECCSTTGGGTSEEEEEECC
T ss_pred EEEEec-cccCCCceEEEEeCCCChhHcCEEEEEEeC
Confidence 999997 4 5665 9999987666669999999963
No 112
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.00 E-value=3.1e-05 Score=64.61 Aligned_cols=92 Identities=12% Similarity=0.088 Sum_probs=60.4
Q ss_pred cCCCcEEEE-ecCCEEEEEEEeCCCCC-----ceEEecCc-----------cc----cCCCCCCCCCccccccCCCCCce
Q 009854 19 YFPGPTIVA-REDDTVLVKVVNHVKYN-----VSIHWHGV-----------RQ----LRTCWADGPAYITQCPIQPGQNY 77 (524)
Q Consensus 19 ~~pgP~i~~-~~Gd~v~v~l~N~l~~~-----~~iH~HG~-----------~~----~~~~~~DG~~~~~q~~i~PG~~~ 77 (524)
+|-...|.| +.|++|+|+|+|....+ +++-+-.. .. .-.+..|..-......|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 454368999 99999999999987553 44433211 00 00000111000011247999999
Q ss_pred EEEEEeCC--cccc-eeeccChHHHHhhceeeEEEcC
Q 009854 78 IYNFTLAG--QRGT-LWWHAHILWLRATVHGAIVILP 111 (524)
Q Consensus 78 ~y~~~~~~--~~Gt-~wyH~H~~~~~~Gl~G~~iV~~ 111 (524)
++.|++ . ++|+ |+|.|-..+.+.||.|.|+|.+
T Consensus 93 ~vtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDV-SKLKEGEDYAFFCSFPGHWSIMKGTIELGS 128 (128)
T ss_dssp EEEEES-SCCCTTCCEEEECCSTTCTTTSEEEEEECC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEeC
Confidence 999997 5 6885 9999987766669999999963
No 113
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.97 E-value=4e-05 Score=63.99 Aligned_cols=91 Identities=12% Similarity=0.079 Sum_probs=59.1
Q ss_pred cCCCcEEEE-ecCCEEEEEEEeCCCCC-----ceEEe--cCccc-------cCCCCC-----CCCCcc-ccccCCCCCce
Q 009854 19 YFPGPTIVA-REDDTVLVKVVNHVKYN-----VSIHW--HGVRQ-------LRTCWA-----DGPAYI-TQCPIQPGQNY 77 (524)
Q Consensus 19 ~~pgP~i~~-~~Gd~v~v~l~N~l~~~-----~~iH~--HG~~~-------~~~~~~-----DG~~~~-~q~~i~PG~~~ 77 (524)
+|-...|.| ++||+|+|+|+|....+ +++-+ .|... .....+ |....+ ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 454368999 99999999999987553 44333 22110 000001 110001 01248999999
Q ss_pred EEEEEeCC--cccc-eeeccChHHHHhhceeeEEEc
Q 009854 78 IYNFTLAG--QRGT-LWWHAHILWLRATVHGAIVIL 110 (524)
Q Consensus 78 ~y~~~~~~--~~Gt-~wyH~H~~~~~~Gl~G~~iV~ 110 (524)
++.|++ . ++|+ |+|.|-..+.+.||.|.|+|.
T Consensus 94 svtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EEEEEG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 999997 4 5777 999998766666999999984
No 114
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.94 E-value=1.7e-05 Score=65.81 Aligned_cols=74 Identities=15% Similarity=0.113 Sum_probs=50.3
Q ss_pred cEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccChHHHHhh
Q 009854 23 PTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHILWLRAT 102 (524)
Q Consensus 23 P~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~~~~~~G 102 (524)
+.|++++||+|++ .|... .++++.... .+-+|.. ...+.||+++++.| +++|+|+|+|-.|..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~~-----~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIKG-----MIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECTT-----CSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEccc-----ccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 7999999998665 45543 444444321 1122211 12357999998888 478999999987544
Q ss_pred ceeeEEEcCCC
Q 009854 103 VHGAIVILPKR 113 (524)
Q Consensus 103 l~G~~iV~~~~ 113 (524)
|.|.|+|.+..
T Consensus 84 M~G~I~V~~~p 94 (122)
T 2ux6_A 84 MVGVVQVGDAP 94 (122)
T ss_dssp EEEEEEESSSC
T ss_pred CEEEEEEeCCC
Confidence 99999998743
No 115
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.93 E-value=2.7e-05 Score=81.59 Aligned_cols=78 Identities=15% Similarity=0.368 Sum_probs=62.7
Q ss_pred eEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeC
Q 009854 400 RIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRAD 479 (524)
Q Consensus 400 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 479 (524)
+.+.++.|+.|+|.+.|.....+..|.|++++..+. ..+.||....+.|+++
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta~ 564 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVAA 564 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEECC
Confidence 467899999999999995422345788888865321 4678899999999999
Q ss_pred CceeEEEEee---chHhhhccceEEEEEcCC
Q 009854 480 NPGVWFMHCH---LEVHTTWGLKMAFIVDNG 507 (524)
Q Consensus 480 npG~w~~HCH---il~H~d~GM~~~~~V~~~ 507 (524)
.||.|.|||| ...|. ||...++|++.
T Consensus 565 ~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 565 NPGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp SCEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CCEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 9999999999 45675 99999999753
No 116
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.91 E-value=1.9e-05 Score=81.01 Aligned_cols=94 Identities=16% Similarity=0.221 Sum_probs=67.2
Q ss_pred CCCCccccE--EEEcCcCCCcEEEEecCCEEEEEEEeCC---CCCceEEecCccccCCCCCCCCCccccccCCCCCceEE
Q 009854 5 TRLCSTKPI--VTVNGYFPGPTIVAREDDTVLVKVVNHV---KYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIY 79 (524)
Q Consensus 5 ~~~g~~~~~--~~~NG~~pgP~i~~~~Gd~v~v~l~N~l---~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y 79 (524)
-++|.+..+ ...+-++-.+.|++++||+|++.++|.. ...+++...++ |+ ..-+.||++.++
T Consensus 538 ~RdGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---------GI----K~DaiPGrtnsv 604 (638)
T 3sbq_A 538 IRDGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---------GV----SMEISPQQTSSI 604 (638)
T ss_dssp EEETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------TE----EEEECTTCEEEE
T ss_pred ccCCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC---------Cc----eeeeCCCCeEEE
Confidence 456665544 3445567667999999999999999974 23333333221 11 124889999999
Q ss_pred EEEeCCcccceeeccChH-HHH-hhceeeEEEcCC
Q 009854 80 NFTLAGQRGTLWWHAHIL-WLR-ATVHGAIVILPK 112 (524)
Q Consensus 80 ~~~~~~~~Gt~wyH~H~~-~~~-~Gl~G~~iV~~~ 112 (524)
.|.+ +++|+|||+|... +.. .+|.|.|+|+++
T Consensus 605 tFta-dkPGvY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 605 TFVA-DKPGLHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEEC-CSCEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEEc-CCCEEEEEECCCcCCCCcccceEEEEEecC
Confidence 9998 8999999999842 222 789999999864
No 117
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.90 E-value=3.7e-05 Score=62.09 Aligned_cols=73 Identities=16% Similarity=0.239 Sum_probs=50.9
Q ss_pred eEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeC
Q 009854 400 RIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRAD 479 (524)
Q Consensus 400 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 479 (524)
..+.++.|++|+|+ |.. ...|.+|++... .|. . . -++-.+.||+...+.| +
T Consensus 33 ~~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~-------~-------~-~~~~~~~pG~~~~~tf--~ 83 (105)
T 2ov0_A 33 PELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE-------A-------A-LKGPMMKKEQAYSLTF--T 83 (105)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS-------S-------C-EECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc-------c-------c-ccccccCCCCEEEEEe--C
Confidence 35788999999985 533 457999988521 010 0 0 1122467888766665 8
Q ss_pred CceeEEEEeechHhhhccceEEEEEc
Q 009854 480 NPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 480 npG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
.||.|.|||++ |. ||...++|+
T Consensus 84 ~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 84 EAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999998 65 999999874
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.24 E-value=0.0014 Score=53.74 Aligned_cols=89 Identities=10% Similarity=0.060 Sum_probs=54.6
Q ss_pred cCCCcEEEEec-CCEEEEEEEeCCCCC-----ceEEe-----------cCccccC----CCCCCCCCccccccCCCCCce
Q 009854 19 YFPGPTIVARE-DDTVLVKVVNHVKYN-----VSIHW-----------HGVRQLR----TCWADGPAYITQCPIQPGQNY 77 (524)
Q Consensus 19 ~~pgP~i~~~~-Gd~v~v~l~N~l~~~-----~~iH~-----------HG~~~~~----~~~~DG~~~~~q~~i~PG~~~ 77 (524)
+|--..|.|+. |++|+|+|+|....+ +++=+ -|+...+ .+..|..--.....|.||+++
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 34447999976 999999999997542 33211 1111100 000111100111248999999
Q ss_pred EEEEEeC--CcccceeeccChHHHHhhceeeEEEc
Q 009854 78 IYNFTLA--GQRGTLWWHAHILWLRATVHGAIVIL 110 (524)
Q Consensus 78 ~y~~~~~--~~~Gt~wyH~H~~~~~~Gl~G~~iV~ 110 (524)
+..|+.+ .++|+|.|.|. +.. ||.|.++|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 9999983 17899999998 333 999999984
No 119
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.19 E-value=0.00085 Score=55.76 Aligned_cols=75 Identities=21% Similarity=0.286 Sum_probs=50.0
Q ss_pred EEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeCC
Q 009854 401 IYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADN 480 (524)
Q Consensus 401 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 480 (524)
.+.++.|++|+|++.| ..|-+..+.. .. +.. ...+.+.||+...+.| +.
T Consensus 24 ~i~V~~GDtVtf~n~~------~~H~v~~~~~----------~~-P~g------------~~~f~s~pGet~s~TF--~~ 72 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKD------KGHNSALMKG----------GA-PEG------------AETWKGKINEEITVTL--SK 72 (127)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTT----------CS-CTT------------CCCCBCCTTCCCEEEC--CS
T ss_pred EEEECCCCEEEEEECC------CCceEEEccC----------cC-CCC------------ccceecCCCCEEEEEe--CC
Confidence 5789999999998654 1355544321 00 000 0112234676655554 89
Q ss_pred ceeEEEEeechHhhhccceEEEEEcCCC
Q 009854 481 PGVWFMHCHLEVHTTWGLKMAFIVDNGK 508 (524)
Q Consensus 481 pG~w~~HCHil~H~d~GM~~~~~V~~~~ 508 (524)
||.|.|||- .|...||...+.|.++.
T Consensus 73 pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 73 PGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 999999999 69999999999998754
No 120
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.15 E-value=0.0011 Score=54.63 Aligned_cols=75 Identities=13% Similarity=0.172 Sum_probs=51.4
Q ss_pred EEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeCC
Q 009854 401 IYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADN 480 (524)
Q Consensus 401 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 480 (524)
.+.++.|++|+|+..+ ..|.+..+.. .+... .+.+.+.+|+...+.| +.
T Consensus 23 ~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~g-------------~~~~~~~pg~t~s~TF--~~ 71 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPEG-------------VAPVKGGFSKEVVFNA--EK 71 (124)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTT----------TSCTT-------------SCCCBCCTTCCEEEEC--CS
T ss_pred EEEECCCCEEEEEECC------CCccEEEeCC----------cCCCC-------------ccccccCCCCEEEEEe--CC
Confidence 5789999999998432 3566665421 11100 1122345777666555 89
Q ss_pred ceeEEEEeechHhhhccceEEEEEcCCC
Q 009854 481 PGVWFMHCHLEVHTTWGLKMAFIVDNGK 508 (524)
Q Consensus 481 pG~w~~HCHil~H~d~GM~~~~~V~~~~ 508 (524)
||.|.|||- .|...||...+.|.++.
T Consensus 72 ~G~y~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 72 EGLYVLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp SEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CeEEEEEcC--CCCcCCCEEEEEECCCC
Confidence 999999995 89999999999998753
No 121
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.12 E-value=0.0018 Score=53.43 Aligned_cols=73 Identities=14% Similarity=0.196 Sum_probs=50.5
Q ss_pred EEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeCC
Q 009854 401 IYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADN 480 (524)
Q Consensus 401 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 480 (524)
.+.++.|++|+|++.|. .|-+..+.. .. +.. .+.+.+.||+...+.| +.
T Consensus 22 ~i~V~~GdtV~f~~~~~------~H~v~~~~~----------~~-P~g------------~~~f~~~pg~t~s~TF--~~ 70 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK------SHNVEAIKE----------IL-PEG------------VESFKSKINESYTLTV--TE 70 (123)
T ss_dssp EEEECTTEEEEEEESST------TCCCEECTT----------SS-CTT------------CCCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECCC------CceEEEcCC----------cC-CCC------------ccceecCCCCEEEEEe--CC
Confidence 57899999999987651 355554321 00 000 0112245677666666 89
Q ss_pred ceeEEEEeechHhhhccceEEEEEcC
Q 009854 481 PGVWFMHCHLEVHTTWGLKMAFIVDN 506 (524)
Q Consensus 481 pG~w~~HCHil~H~d~GM~~~~~V~~ 506 (524)
||.|.|+|- .|...||...+.|.+
T Consensus 71 pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 71 PGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEESS
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECC
Confidence 999999999 899999999999986
No 122
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.07 E-value=0.0021 Score=51.69 Aligned_cols=72 Identities=18% Similarity=0.158 Sum_probs=49.0
Q ss_pred EEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeCC
Q 009854 401 IYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADN 480 (524)
Q Consensus 401 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 480 (524)
.+.++.|++|+|+ |.+ ...|.+++.... .+ . ..-++-.+.+|+...+.| +.
T Consensus 35 ~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~-------~~----~-----------~~~~s~~l~~g~~~~~tf--~~ 85 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VG----E-----------DAFRGEMMTKDQAYAITF--NE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SS----S-----------SCEECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCcEEEEEeCCC-------CC----c-----------ccccccccCCCCEEEEEe--CC
Confidence 5788999999987 532 346766654321 00 0 001233567888777766 78
Q ss_pred ceeEEEEeechHhhhccceEEEEEc
Q 009854 481 PGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 481 pG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
||.|.|+|-+ |. ||...+.|+
T Consensus 86 ~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 86 AGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--CC--CCEEEEEEC
Confidence 9999999987 76 999999874
No 123
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.05 E-value=0.0025 Score=50.38 Aligned_cols=81 Identities=16% Similarity=0.269 Sum_probs=53.1
Q ss_pred eEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeC
Q 009854 400 RIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRAD 479 (524)
Q Consensus 400 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 479 (524)
..+.++.|++|+|+ |.+ ...|-+.+... .+... .+. .....+...+.+|+...+.| +
T Consensus 18 ~~i~v~~GdtV~~~--n~~---~~~H~v~~~~~----------~~p~g-----~~~-~~~~~~~~~~~~g~~~~~tf--~ 74 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNA---GFPHNIVFDED----------AVPAG-----VDA-DAISYDDYLNSKGETVVRKL--S 74 (98)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEECTT----------SSCTT-----CCH-HHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEeCC----------CCccc-----ccc-ccccccccccCCCCEEEEEc--C
Confidence 35788999999996 432 34666554431 00000 000 00013346788999877766 8
Q ss_pred CceeEEEEeechHhhhccceEEEEEc
Q 009854 480 NPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 480 npG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
.||.|.|+|-+ |...||...+.|+
T Consensus 75 ~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 75 TPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp SCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CCEEEEEEchh--hccCCCEEEEEEC
Confidence 99999999986 9999999999884
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.93 E-value=0.0029 Score=53.02 Aligned_cols=73 Identities=18% Similarity=0.152 Sum_probs=50.1
Q ss_pred eEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeC
Q 009854 400 RIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRAD 479 (524)
Q Consensus 400 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 479 (524)
..+.++.|++|+|+ |.+ ...|.+++.... .| . ..-++-.+.+|+...+.| +
T Consensus 60 ~~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~-------~g----~-----------~~~~s~~l~pG~t~~~tF--~ 110 (132)
T 3c75_A 60 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VG----E-----------DAFRGEMMTKDQAYAITF--N 110 (132)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SS----S-----------SCEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCceEEEEeCCC-------CC----c-----------ccccccccCCCCEEEEEc--C
Confidence 35788999999987 532 456777664311 00 0 001233567888777766 7
Q ss_pred CceeEEEEeechHhhhccceEEEEEc
Q 009854 480 NPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 480 npG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
.||.|.|||-+ |. ||...++|+
T Consensus 111 ~~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 111 EAGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--Cc--CCEEEEEEC
Confidence 89999999987 76 999999884
No 125
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.45 E-value=0.011 Score=48.75 Aligned_cols=37 Identities=16% Similarity=0.385 Sum_probs=30.1
Q ss_pred cCCcEEEEEEEeCCceeEEEEeechHhhhccceEEEEEcCC
Q 009854 467 PSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVDNG 507 (524)
Q Consensus 467 pp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 507 (524)
.+|+...+. ++.||.|.|+|- .|...||...+.|.++
T Consensus 59 ~pG~t~~~t--F~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 59 KINENYVLT--VTQPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp CTTCCEEEE--CCSCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CCCCEEEEE--eCCCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 467755544 488999999997 5999999999999863
No 126
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.44 E-value=0.011 Score=61.02 Aligned_cols=79 Identities=15% Similarity=0.317 Sum_probs=61.2
Q ss_pred eEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeC
Q 009854 400 RIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRAD 479 (524)
Q Consensus 400 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 479 (524)
..+.++.|+.|+|++.|.....+..|.|.+.+... -+.+.||....+.|+++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI----------------------------K~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV----------------------------SMEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------------------EEEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc----------------------------eeeeCCCCeEEEEEEcC
Confidence 46789999999999999532235677777765422 12567888899999999
Q ss_pred CceeEEEEeechHhh-hccceEEEEEcC
Q 009854 480 NPGVWFMHCHLEVHT-TWGLKMAFIVDN 506 (524)
Q Consensus 480 npG~w~~HCHil~H~-d~GM~~~~~V~~ 506 (524)
.||.|.++|...-|. +.+|...++|++
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999986664 468999999874
No 127
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.37 E-value=0.01 Score=49.01 Aligned_cols=38 Identities=24% Similarity=0.483 Sum_probs=30.8
Q ss_pred ecCCcEEEEEEEeCCceeEEEEeechHhhhccceEEEEEcCC
Q 009854 466 VPSGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFIVDNG 507 (524)
Q Consensus 466 vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 507 (524)
+.+|+...+.| +.||.|.|+|- .|...||...+.|.++
T Consensus 58 ~~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAVVKF--DKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEEEEC--CSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred cCCCCEEEEEe--CCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 45777655554 88999999997 5999999999999863
No 128
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.37 E-value=0.01 Score=49.78 Aligned_cols=74 Identities=16% Similarity=0.219 Sum_probs=52.7
Q ss_pred cEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccCh-HHHH-
Q 009854 23 PTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHI-LWLR- 100 (524)
Q Consensus 23 P~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~-~~~~- 100 (524)
..|.+..|++|+++++|.. .. |+..++. -|. ..-+.||+.-++.|+. +++|+|.|.|.. .+..
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V~-----Hsf~ip~----~~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-VI-----HGFHVEG----TNI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-SC-----EEEEETT----SSC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-cc-----ceEEecC----CCc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 5899999999999999973 33 3333321 111 1236799988889987 899999999943 1222
Q ss_pred hhceeeEEEcC
Q 009854 101 ATVHGAIVILP 111 (524)
Q Consensus 101 ~Gl~G~~iV~~ 111 (524)
.+|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 68999988863
No 129
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.21 E-value=0.0059 Score=53.08 Aligned_cols=44 Identities=11% Similarity=0.152 Sum_probs=39.1
Q ss_pred CceeEecCCcEEEEEEEeC--CceeEEEEeechHhhhccceEEEEEc
Q 009854 461 RNTIGVPSGGWTAIRFRAD--NPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 461 rDTv~vpp~g~v~irf~ad--npG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
..+..|.||+...|.|.++ .||.|-|+|-+--|.. ||-..|+|+
T Consensus 121 ~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 121 AHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp EECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred ccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 3456789999999999987 8999999999999988 999999986
No 130
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.20 E-value=0.0091 Score=51.88 Aligned_cols=79 Identities=15% Similarity=0.202 Sum_probs=56.1
Q ss_pred CcCCCcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccccCCCCCceEEEEEeCCcccceeeccCh-
Q 009854 18 GYFPGPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTLAGQRGTLWWHAHI- 96 (524)
Q Consensus 18 G~~pgP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wyH~H~- 96 (524)
-.+-...|.+..|++|++.++|. +..++...-++. . +.-+.||+.-++.|.+ +++|+|++.|..
T Consensus 88 ~~f~Pn~l~VP~G~~Vr~~vTS~-DViHsf~IP~lg---------i----k~da~PG~~n~~~~~~-~kpG~y~g~Cse~ 152 (168)
T 3s8f_B 88 FGYQPNPIEVPQGAEIVFKITSP-DVIHGFHVEGTN---------I----NVEVLPGEVSTVRYTF-KRPGEYRIICNQY 152 (168)
T ss_dssp TEEESSSEEEETTSEEEEEEECS-SSCEEEEETTSS---------C----EEEECTTBCEEEEEEC-CSCEEEEEECCSC
T ss_pred ceEecCEEEEeCCCeEEEEEecC-CceEEEEECCCC---------e----EEEecCCceeEEEEEe-CCCEEEEEECCcC
Confidence 33333689999999999999996 333333222211 1 1236799999999997 899999999973
Q ss_pred HHHH-hhceeeEEEcC
Q 009854 97 LWLR-ATVHGAIVILP 111 (524)
Q Consensus 97 ~~~~-~Gl~G~~iV~~ 111 (524)
.+.. ++|.|-++|++
T Consensus 153 CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 153 CGLGHQNMFGTIVVKE 168 (168)
T ss_dssp CSTTGGGCEEEEEEEC
T ss_pred CCCCcCCCEEEEEEeC
Confidence 4443 89999999863
No 131
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.80 E-value=0.043 Score=45.52 Aligned_cols=91 Identities=16% Similarity=0.273 Sum_probs=61.2
Q ss_pred eEEEccCC-CEEEEEEEcCCCCC--CCCCCeeecCcceEEEeecC-----------C---CCCCCCCCCCCCCCCCCcCc
Q 009854 400 RIYRLPYN-STVQLVLQDTGMIA--PENHPLHLHGFNFFEVGRGL-----------G---NFNSKKDPKKFNLVDPVERN 462 (524)
Q Consensus 400 ~~~~~~~g-~~v~~~i~n~~~~~--~~~HP~HlHG~~F~Vl~~g~-----------g---~~~~~~~~~~~~~~~p~~rD 462 (524)
..+.++.| +.+.+++.|.+... .+.|- |.+...+. | .|-+..+ .-....
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~-------~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~-------~~~~~~ 83 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHN-------WVLAKSADVGDVAKEGAHAGADNNFVTPGD-------KRVIAF 83 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBC-------CEEEEGGGHHHHHHHHHTTCGGGTTSCTTC-------TTCSEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccc-------eEEecCcchhhhHHHhhhcccccccccccc-------ccceee
Confidence 35788999 99999999965221 12344 43333221 0 1111000 001234
Q ss_pred eeEecCCcEEEEEEEeC---CceeEEEEeechHhhhccceEEEEEc
Q 009854 463 TIGVPSGGWTAIRFRAD---NPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 463 Tv~vpp~g~v~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
+..|.||+...|.|.++ .||.|-|.|-+--|.. ||-..+.|+
T Consensus 84 t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 84 TPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred eeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 56789999999999987 8999999999999988 899999886
No 132
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.74 E-value=0.037 Score=46.33 Aligned_cols=70 Identities=17% Similarity=0.352 Sum_probs=50.8
Q ss_pred EEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeCCc
Q 009854 402 YRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADNP 481 (524)
Q Consensus 402 ~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp 481 (524)
+.++.|+.|+|++.|. +..|. |.+-+.+ . -+.+.||....+.|+++.|
T Consensus 62 l~Vp~G~~V~~~vts~----DV~Hs-------f~ip~~~------------------~---k~d~~PG~~~~~~~~~~~~ 109 (135)
T 2cua_A 62 IEVPQGAEIVFKITSP----DVIHG-------FHVEGTN------------------I---NVEVLPGEVSTVRYTFKRP 109 (135)
T ss_dssp EEEETTSEEEEEEEBS----SSCEE-------EEETTSS------------------C---EEEECBTBCEEEEEECCSC
T ss_pred EEEcCCCEEEEEEEeC----Cccce-------EEecCCC------------------c---eeEeCCCCcEEEEEEcCCC
Confidence 6888999999999883 33444 3332111 0 1345677778899999999
Q ss_pred eeEEEEeec---hHhhhccceEEEEEc
Q 009854 482 GVWFMHCHL---EVHTTWGLKMAFIVD 505 (524)
Q Consensus 482 G~w~~HCHi---l~H~d~GM~~~~~V~ 505 (524)
|.|.++|.. ..| .+|-..++|.
T Consensus 110 G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 110 GEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred EEEEEECcccCCCCc--CCCEEEEEEE
Confidence 999999987 566 5899888875
No 133
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.53 E-value=0.04 Score=45.24 Aligned_cols=73 Identities=15% Similarity=0.208 Sum_probs=47.0
Q ss_pred eEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeC
Q 009854 400 RIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRAD 479 (524)
Q Consensus 400 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 479 (524)
..+.++.|++|+|+..+ ..|-+++... .+... . ..+.+.+|+...+.| +
T Consensus 21 ~~i~V~~GdtV~f~n~d------~~H~v~~~~~----------~~p~~--~-----------~~~~~~~g~t~~~tF--~ 69 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTD------KGHNVETIKG----------MIPDG--A-----------EAFKSKINENYKVTF--T 69 (122)
T ss_dssp SEEEECTTEEEEEEESS------SSCCCEECTT----------CSCTT--C-----------CCCBCCTTCCEEEEE--C
T ss_pred CEEEECCCCEEEEEECC------CCcEEEEccc----------ccCCC--c-----------ceeecCCCCEEEEEe--C
Confidence 35788999999997432 1466665531 11100 0 011235677665555 8
Q ss_pred CceeEEEEeechHhhhccceEEEEEcCC
Q 009854 480 NPGVWFMHCHLEVHTTWGLKMAFIVDNG 507 (524)
Q Consensus 480 npG~w~~HCHil~H~d~GM~~~~~V~~~ 507 (524)
.||.|.|+|-+ |.. |...+.|.+.
T Consensus 70 ~~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 70 APGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp SCEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CCEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 89999999987 665 9999999863
No 134
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=94.97 E-value=0.051 Score=45.05 Aligned_cols=43 Identities=16% Similarity=0.267 Sum_probs=37.6
Q ss_pred ceeEecCCcEEEEEEEeC--Ccee-EEEEeechHhhhccceEEEEEc
Q 009854 462 NTIGVPSGGWTAIRFRAD--NPGV-WFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 462 DTv~vpp~g~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 505 (524)
.+..|.||+...|.|.++ .+|. |-|.|-+--|.. ||-..+.|.
T Consensus 83 ~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 83 HTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp ECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 455789999999999997 7865 999999999988 899999885
No 135
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.80 E-value=0.097 Score=43.29 Aligned_cols=43 Identities=16% Similarity=0.263 Sum_probs=38.1
Q ss_pred ceeEecCCcEEEEEEEeC--Cce-eEEEEeechHhhhccceEEEEEc
Q 009854 462 NTIGVPSGGWTAIRFRAD--NPG-VWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 462 DTv~vpp~g~v~irf~ad--npG-~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
.|..|.||+...|.|.+. .+| .|-|.|-+--|.. ||-..+.|.
T Consensus 82 ~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 82 HTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp ECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred cceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 455789999999999988 899 4999999999998 999999886
No 136
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.23 E-value=0.16 Score=41.97 Aligned_cols=43 Identities=16% Similarity=0.291 Sum_probs=37.3
Q ss_pred ceeEecCCcEEEEEEEeC--Ccee-EEEEeechHhhhccceEEEEEc
Q 009854 462 NTIGVPSGGWTAIRFRAD--NPGV-WFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 462 DTv~vpp~g~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 505 (524)
.|-.|.||+...|.|.+. .+|. |-|.|-+--|.. ||-..+.|+
T Consensus 83 ~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 83 HTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp ECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred eeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 345689999999999987 7876 999999999998 899999874
No 137
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.97 E-value=0.21 Score=43.29 Aligned_cols=73 Identities=16% Similarity=0.328 Sum_probs=54.5
Q ss_pred EEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeCCc
Q 009854 402 YRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRADNP 481 (524)
Q Consensus 402 ~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp 481 (524)
+.++.|+.|++.+.|. +..|.|-+=.... -+.+-||..-.+.|.++.|
T Consensus 95 l~VP~G~~Vr~~vTS~----DViHsf~IP~lgi----------------------------k~da~PG~~n~~~~~~~kp 142 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP----DVIHGFHVEGTNI----------------------------NVEVLPGEVSTVRYTFKRP 142 (168)
T ss_dssp EEEETTSEEEEEEECS----SSCEEEEETTSSC----------------------------EEEECTTBCEEEEEECCSC
T ss_pred EEEeCCCeEEEEEecC----CceEEEEECCCCe----------------------------EEEecCCceeEEEEEeCCC
Confidence 6788999999999983 4556665432211 1234577777899999999
Q ss_pred eeEEEEeec-hHhhhccceEEEEEcC
Q 009854 482 GVWFMHCHL-EVHTTWGLKMAFIVDN 506 (524)
Q Consensus 482 G~w~~HCHi-l~H~d~GM~~~~~V~~ 506 (524)
|.|.+.|.. --+-+.+|...+.|++
T Consensus 143 G~y~g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 143 GEYRIICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred EEEEEECCcCCCCCcCCCEEEEEEeC
Confidence 999999985 5566789999998863
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=92.92 E-value=0.44 Score=38.92 Aligned_cols=97 Identities=13% Similarity=0.183 Sum_probs=57.8
Q ss_pred eEEEccC-CCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCC-CC-CCC-CCCCCCCC----CCCCcCceeEecCCcE
Q 009854 400 RIYRLPY-NSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLG-NF-NSK-KDPKKFNL----VDPVERNTIGVPSGGW 471 (524)
Q Consensus 400 ~~~~~~~-g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g-~~-~~~-~~~~~~~~----~~p~~rDTv~vpp~g~ 471 (524)
.-+.++. |+.|+++|.|.+.+ |--.=||.|.+...+.- .. ... .....-++ .....-.|..|.||+.
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~-----p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes 92 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNL-----PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEK 92 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSC-----CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCE
T ss_pred CEEEEecCCCEEEEEEEECCcc-----cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcE
Confidence 3567865 99999999997632 11111345544432100 00 000 00000011 1123446778999999
Q ss_pred EEEEEEeC---CceeEEEEeechHhhhccceEEEEEc
Q 009854 472 TAIRFRAD---NPGVWFMHCHLEVHTTWGLKMAFIVD 505 (524)
Q Consensus 472 v~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~ 505 (524)
..|.|.+. .+|.|-|-|- -|. ||-..+.|+
T Consensus 93 ~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 93 DSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 99999987 8999999999 888 999999874
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=88.33 E-value=3.8 Score=33.07 Aligned_cols=71 Identities=15% Similarity=0.220 Sum_probs=51.9
Q ss_pred cCCE--EEEEEEecCCCCeEEEEEc-CceeeEEE--ecCcccc--------eeEecEEEeCCCceEEEEEEeCC--CCCc
Q 009854 182 SGKT--YMLRLINAALNEELFFKIA-GHKLTVVE--VDAAYVK--------PFKTETVLIAPGQTTNVLLSAAH--ATGK 246 (524)
Q Consensus 182 ~G~~--~rlRliN~~~~~~~~~~l~-gh~~~via--~DG~~~~--------P~~~d~v~l~pgeR~dv~v~~~~--~~g~ 246 (524)
.|+. +.|.+.|.+ .....+.+. |+.+.++- .+|..+- ........|.|||...+-+..++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s-~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQS-ERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECS-SSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCC-CCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 4444 468889999 677777776 66655444 4576551 34567999999999999999995 4799
Q ss_pred eEEEEee
Q 009854 247 YLVAASP 253 (524)
Q Consensus 247 ~~~~~~~ 253 (524)
|.+++..
T Consensus 95 Ytl~a~l 101 (120)
T 3isy_A 95 YEVKVTF 101 (120)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998764
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=75.25 E-value=12 Score=33.27 Aligned_cols=62 Identities=13% Similarity=0.132 Sum_probs=47.0
Q ss_pred eeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceEEEEEEeCCCCCceEEEEeeCC
Q 009854 176 FKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHATGKYLVAASPFL 255 (524)
Q Consensus 176 p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~~~ 255 (524)
..+.+..|+.+||+|.+.. -.|.|.|......+ ..-||..-.+-+.+++ ||.|...|..+.
T Consensus 41 n~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgvK~----------------daiPGr~n~l~~~~~~-pG~y~g~CsE~C 101 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS--VMHSFFIPRLGSQI----------------YAMAGMQTRLHLIANE-PGTYDGICAEIC 101 (205)
T ss_dssp SEEEEETTSCEEEEEEESS--SCEEEEEGGGTEEE----------------EECTTCCEEEEECCSS-SEEEEEEECSCC
T ss_pred ceEEEeCCCEEEEEEecCC--ceeeEEecccCcEE----------------EecCCceEEEEEEeCC-CeEEEEEccccc
Confidence 3589999999999998765 57777777554333 3347888888888887 699999998665
Q ss_pred C
Q 009854 256 D 256 (524)
Q Consensus 256 ~ 256 (524)
.
T Consensus 102 G 102 (205)
T 1cyx_A 102 G 102 (205)
T ss_dssp S
T ss_pred c
Confidence 4
No 141
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=66.67 E-value=13 Score=29.85 Aligned_cols=63 Identities=10% Similarity=0.200 Sum_probs=38.9
Q ss_pred EEEEEEEeCCCCCceEEecCccc-c----------CCCCCCCCCc---cccccCCCCCceEEEEEeCC--cccceeecc
Q 009854 32 TVLVKVVNHVKYNVSIHWHGVRQ-L----------RTCWADGPAY---ITQCPIQPGQNYIYNFTLAG--QRGTLWWHA 94 (524)
Q Consensus 32 ~v~v~l~N~l~~~~~iH~HG~~~-~----------~~~~~DG~~~---~~q~~i~PG~~~~y~~~~~~--~~Gt~wyH~ 94 (524)
.+.++++|....+..+.+.-... . .-.|+||..+ .....|.||++.+|+...++ .+|+|..+.
T Consensus 21 ~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a 99 (120)
T 3isy_A 21 KFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKV 99 (120)
T ss_dssp EEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEE
T ss_pred EEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEE
Confidence 34556667766666655543321 0 0134777433 23456899999999999953 579997764
No 142
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=59.05 E-value=28 Score=32.15 Aligned_cols=63 Identities=14% Similarity=0.206 Sum_probs=47.2
Q ss_pred eeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceEEEEEEeCCCCCceEEEEeeCC
Q 009854 176 FKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHATGKYLVAASPFL 255 (524)
Q Consensus 176 p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~~~ 255 (524)
..+.++.|+.+||++-+.. -.|.|.+.....++ ..-||..-.+-+.+++ ||.|...|..+.
T Consensus 171 n~l~lP~g~~v~~~~tS~D--ViHsf~ip~l~~k~----------------da~PG~~n~~~~~~~~-~G~y~g~Cse~C 231 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD--VIHSWTVPAFGVKQ----------------DAVPGRLAQLWFRAER-EGIFFGQCSELC 231 (262)
T ss_dssp SCEEEETTSEEEEEEEESS--SCEEEEEGGGTEEE----------------EECBTCCEEEEEECCS-CEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEECc--ccceeeecccCceE----------------EecCCceeEEEEecCC-cEEEEEEChHhc
Confidence 4689999999999998664 57778777554433 2346777788888887 699999998664
Q ss_pred CC
Q 009854 256 DT 257 (524)
Q Consensus 256 ~~ 257 (524)
..
T Consensus 232 G~ 233 (262)
T 2gsm_B 232 GI 233 (262)
T ss_dssp ST
T ss_pred cc
Confidence 43
No 143
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=55.85 E-value=37 Score=32.00 Aligned_cols=62 Identities=16% Similarity=0.248 Sum_probs=47.6
Q ss_pred eeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceEEEEEEeCCCCCceEEEEeeCC
Q 009854 176 FKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHATGKYLVAASPFL 255 (524)
Q Consensus 176 p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~~~ 255 (524)
..+.+..|+.+||++-+.. -.|.|.+.....++ ..-||..-.+-+.+++ ||.|...|..+.
T Consensus 189 N~lvlP~g~~V~~~ltS~D--ViHsf~iP~lg~k~----------------daiPG~~n~~~~~~~~-~G~y~g~CsE~C 249 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD--VIHAWTIPAFAVKQ----------------DAVPGRIAQLWFSVDQ-EGVYFGQCSELC 249 (298)
T ss_dssp SCEEEESSSEEEEEEEESS--SCEEEEEGGGTEEE----------------EECTTCCEEEEEECSS-SEEEEECCCSCC
T ss_pred ceEEEEcCCEEEEEEEeCC--ccceeeEcccCceE----------------EecCCceEEEEEEeCC-CEEEEEEccccc
Confidence 4689999999999998855 67778777554433 2347888888888887 699999998654
Q ss_pred C
Q 009854 256 D 256 (524)
Q Consensus 256 ~ 256 (524)
.
T Consensus 250 G 250 (298)
T 3hb3_B 250 G 250 (298)
T ss_dssp S
T ss_pred C
Confidence 4
No 144
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=55.10 E-value=30 Score=27.47 Aligned_cols=47 Identities=26% Similarity=0.451 Sum_probs=30.4
Q ss_pred EEEEEEEecCCCC-eEEEEEcCc-eeeEEEecCcccceeEecEEEeCCCceEEEEEEeC
Q 009854 185 TYMLRLINAALNE-ELFFKIAGH-KLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAA 241 (524)
Q Consensus 185 ~~rlRliN~~~~~-~~~~~l~gh-~~~via~DG~~~~P~~~d~v~l~pgeR~dv~v~~~ 241 (524)
.|+|+|+|.+... .+.|++.|. .+++++ + ..+.+.||+..++-|...
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~---~~i~v~~g~~~~~~v~v~ 82 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------K---QTIQVEPGEVLNLPMSLG 82 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEES-------C---CEEEECTTCEEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEeC-------C---CcEEECCCCEEEEEEEEE
Confidence 6899999999443 445556553 233321 1 149999999877766553
No 145
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=47.57 E-value=45 Score=29.45 Aligned_cols=74 Identities=18% Similarity=0.209 Sum_probs=51.3
Q ss_pred eEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEeC
Q 009854 400 RIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRAD 479 (524)
Q Consensus 400 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 479 (524)
+.+.++.|+.|++.+.+. +..|.|-+=..... .| +-||-...+.|.++
T Consensus 41 n~l~lP~g~~V~~~lTS~----DViHSF~IP~lgvK-------------------------~d---aiPGr~n~l~~~~~ 88 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN----SVMHSFFIPRLGSQ-------------------------IY---AMAGMQTRLHLIAN 88 (205)
T ss_dssp SEEEEETTSCEEEEEEES----SSCEEEEEGGGTEE-------------------------EE---ECTTCCEEEEECCS
T ss_pred ceEEEeCCCEEEEEEecC----CceeeEEecccCcE-------------------------EE---ecCCceEEEEEEeC
Confidence 357889999999999873 45565555432211 12 23566677889999
Q ss_pred CceeEEEEeechHhh-hccceEEEEEc
Q 009854 480 NPGVWFMHCHLEVHT-TWGLKMAFIVD 505 (524)
Q Consensus 480 npG~w~~HCHil~H~-d~GM~~~~~V~ 505 (524)
.||.|...|-.+-.. +..|-..++|.
T Consensus 89 ~pG~y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 89 EPGTYDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp SSEEEEEEECSCCSTTSTTCCEEEEEE
T ss_pred CCeEEEEEcccccccchhhceEEEEEE
Confidence 999999999876655 45566667665
No 146
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=46.80 E-value=40 Score=25.77 Aligned_cols=68 Identities=12% Similarity=0.125 Sum_probs=38.1
Q ss_pred EEecCCEEEEEEEecCCCCeEEEEEcC--ceeeEEEecCcccceeEecEEEeCCCceEEEEEEeCCC--CCceEEEEe
Q 009854 179 PVESGKTYMLRLINAALNEELFFKIAG--HKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHA--TGKYLVAAS 252 (524)
Q Consensus 179 ~v~~G~~~rlRliN~~~~~~~~~~l~g--h~~~via~DG~~~~P~~~d~v~l~pgeR~dv~v~~~~~--~g~~~~~~~ 252 (524)
.-++||++++|++--... ..+. .+ ..+++...+|..+. .-.........++..+..+.. .|.|.|++.
T Consensus 12 iYrPGetV~~~~~~~~~~-~~p~--~~~~~~v~l~dp~g~~v~---~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~ 83 (102)
T 2p9r_A 12 IYKPGQTVKFRVVSMDEN-FHPL--NELIPLVYIQDPKGNRIA---QWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQ 83 (102)
T ss_dssp EECTTCEEEEEEEEECGG-GCBC--CCEEEEEEEECTTSCEEE---EEEEEECBTTEEEEEEECCSSCCCEEEEEEEE
T ss_pred ccCCCCEEEEEEEEECCC-CcCC--CCCceEEEEECCCCCEEE---EEEeecCCCCEEEEEEECCCCCCCeeEEEEEE
Confidence 468999999998755421 1111 11 13455555665331 112222334566677777654 389999886
No 147
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=46.67 E-value=55 Score=30.83 Aligned_cols=77 Identities=14% Similarity=0.208 Sum_probs=54.1
Q ss_pred ceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEe
Q 009854 399 TRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRA 478 (524)
Q Consensus 399 ~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 478 (524)
.+.+.++.|+.|++.+.+ .+..|.|.+=..... .| +-||-...+.|.+
T Consensus 188 dN~lvlP~g~~V~~~ltS----~DViHsf~iP~lg~k-------------------------~d---aiPG~~n~~~~~~ 235 (298)
T 3hb3_B 188 DNPVVVPVGKKVLVQVTA----TDVIHAWTIPAFAVK-------------------------QD---AVPGRIAQLWFSV 235 (298)
T ss_dssp SSCEEEESSSEEEEEEEE----SSSCEEEEEGGGTEE-------------------------EE---ECTTCCEEEEEEC
T ss_pred cceEEEEcCCEEEEEEEe----CCccceeeEcccCce-------------------------EE---ecCCceEEEEEEe
Confidence 345789999999999988 356676666433221 22 2356667789999
Q ss_pred CCceeEEEEeechH-hhhccceEEEEEcCC
Q 009854 479 DNPGVWFMHCHLEV-HTTWGLKMAFIVDNG 507 (524)
Q Consensus 479 dnpG~w~~HCHil~-H~d~GM~~~~~V~~~ 507 (524)
+.||.|...|.-.- --+..|-..++|.+.
T Consensus 236 ~~~G~y~g~CsE~CG~~Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 236 DQEGVYFGQCSELCGINHAYMPIVVKAVSQ 265 (298)
T ss_dssp SSSEEEEECCCSCCSTTTTSCCEEEEEECH
T ss_pred CCCEEEEEEcccccCcCccCCeeEEEEEcH
Confidence 99999999998554 345677777777643
No 148
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=44.13 E-value=23 Score=27.46 Aligned_cols=53 Identities=11% Similarity=0.097 Sum_probs=35.0
Q ss_pred EEEEEEEeCCCCCc---eEEecCccccCCCCCCCCCccccccCCCCCceEEEEEe-CCcccce
Q 009854 32 TVLVKVVNHVKYNV---SIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIYNFTL-AGQRGTL 90 (524)
Q Consensus 32 ~v~v~l~N~l~~~~---~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~-~~~~Gt~ 90 (524)
.++|.|.|-|+.+. .++..|.-... + --+....|.||++..+++.. +..+|..
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL~~-----~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~ 79 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGLQR-----P-KILNVGDIGGNETVTLRQSFVPVRPGPR 79 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTTEE-----E-EEEEECCBCTTCEEEEEEEECCCSCSSC
T ss_pred EEEEEEECCCCCcccCEEEEEECCCCCc-----c-eEEEcCcCCCCCEEEEEEEEecCcccce
Confidence 67889999998653 46777754321 1 01112349999999999988 5667754
No 149
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=41.22 E-value=66 Score=28.93 Aligned_cols=63 Identities=13% Similarity=0.127 Sum_probs=46.1
Q ss_pred eeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceEEEEEEeCCCCCceEEEEeeCC
Q 009854 176 FKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHATGKYLVAASPFL 255 (524)
Q Consensus 176 p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~~~ 255 (524)
..+.+..|+.+|+++-.+. -.|.|.+.....++ ..-||..-.+-+.+++ ||.|...|..+.
T Consensus 140 n~lvlP~~~~Vr~~vtS~D--ViHsf~vP~lg~K~----------------DaiPGr~n~~~~~~~~-~G~y~g~Cse~C 200 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED--VLHSWAVPSLGLKT----------------DAIPGRLNQTTLMSSR-PGLYYGQCSEIC 200 (227)
T ss_dssp SCEEEETTSCEEEEEEESS--SCEEEEEGGGTEEE----------------EECTTCCEEEEECCSS-CEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEeCc--ccceeeecccCcEE----------------EecCCceEEEEEecCC-cEEEEEEehhhc
Confidence 5789999999999887654 57777777554433 2336777777787887 699999998654
Q ss_pred CC
Q 009854 256 DT 257 (524)
Q Consensus 256 ~~ 257 (524)
..
T Consensus 201 G~ 202 (227)
T 1v54_B 201 GS 202 (227)
T ss_dssp ST
T ss_pred cc
Confidence 43
No 150
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=38.79 E-value=51 Score=26.64 Aligned_cols=69 Identities=17% Similarity=0.313 Sum_probs=38.3
Q ss_pred EEEcCcCCCcEEEEecCCEEEEEEE---eCCCCCc--eEE--ecCccccCC-CCCCCCCccccccCCCCCceEEEEEe
Q 009854 14 VTVNGYFPGPTIVAREDDTVLVKVV---NHVKYNV--SIH--WHGVRQLRT-CWADGPAYITQCPIQPGQNYIYNFTL 83 (524)
Q Consensus 14 ~~~NG~~pgP~i~~~~Gd~v~v~l~---N~l~~~~--~iH--~HG~~~~~~-~~~DG~~~~~q~~i~PG~~~~y~~~~ 83 (524)
..++|=-+.+.=.+..|+.+.+.+. |...... .+| ..|+.++.. ...|+=-+ ..|||.+|+.++|.+..
T Consensus 16 V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 16 VMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp EEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred EEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEe
Confidence 3454421234567788988877776 2221222 232 244444321 11344212 46999999999999776
No 151
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=37.95 E-value=86 Score=28.85 Aligned_cols=76 Identities=18% Similarity=0.309 Sum_probs=52.4
Q ss_pred ceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEe
Q 009854 399 TRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRA 478 (524)
Q Consensus 399 ~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 478 (524)
.+.+.++.|+.|++.+.+. +..|.|-+=.... ..| +-||....+.|.+
T Consensus 170 dn~l~lP~g~~v~~~~tS~----DViHsf~ip~l~~-------------------------k~d---a~PG~~n~~~~~~ 217 (262)
T 2gsm_B 170 DTAMVVPVNKTVVVQVTGA----DVIHSWTVPAFGV-------------------------KQD---AVPGRLAQLWFRA 217 (262)
T ss_dssp SSCEEEETTSEEEEEEEES----SSCEEEEEGGGTE-------------------------EEE---ECBTCCEEEEEEC
T ss_pred cceEEEecCCEEEEEEEEC----cccceeeecccCc-------------------------eEE---ecCCceeEEEEec
Confidence 3457889999999999873 5566665543322 123 2245666788999
Q ss_pred CCceeEEEEeechHhh-hccceEEEEEcC
Q 009854 479 DNPGVWFMHCHLEVHT-TWGLKMAFIVDN 506 (524)
Q Consensus 479 dnpG~w~~HCHil~H~-d~GM~~~~~V~~ 506 (524)
+.||.|...|--.--. +..|-..++|.+
T Consensus 218 ~~~G~y~g~Cse~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 218 EREGIFFGQCSELCGISHAYMPITVKVVS 246 (262)
T ss_dssp CSCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred CCcEEEEEEChHhcccCcccCeEEEEEEc
Confidence 9999999999865544 456666676654
No 152
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=35.59 E-value=13 Score=30.20 Aligned_cols=20 Identities=25% Similarity=0.298 Sum_probs=17.3
Q ss_pred eEEEecCCEEEEEEEecCCC
Q 009854 177 KLPVESGKTYMLRLINAALN 196 (524)
Q Consensus 177 ~~~v~~G~~~rlRliN~~~~ 196 (524)
.|+|+.||+|||.+.|-+..
T Consensus 72 ~InV~~GETVrF~v~nkt~~ 91 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKIVA 91 (131)
T ss_dssp EEEEETTCEEEEEETTEEEE
T ss_pred EEEecCCCEEEEEeCCcEEE
Confidence 38999999999999998843
No 153
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=34.52 E-value=56 Score=31.05 Aligned_cols=62 Identities=13% Similarity=0.152 Sum_probs=45.6
Q ss_pred eeEEEecCCEEEEEEEecCCCCeEEEEEcCceeeEEEecCcccceeEecEEEeCCCceEEEEEEeCCCCCceEEEEeeCC
Q 009854 176 FKLPVESGKTYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVKPFKTETVLIAPGQTTNVLLSAAHATGKYLVAASPFL 255 (524)
Q Consensus 176 p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~P~~~d~v~l~pgeR~dv~v~~~~~~g~~~~~~~~~~ 255 (524)
..+.+..|+.+||++-.. .-.|.|.+.....++ ..-||..-.+-+.+++ ||.|...|..+.
T Consensus 151 n~l~lP~g~~V~~~lTS~--DViHsf~IP~lg~k~----------------DaiPGr~n~~~~~~~~-~G~y~g~CsE~C 211 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN--SVMNSFFIPRLGSQI----------------YAMAGMQTRLHLIANE-PGTYDGISASYS 211 (315)
T ss_dssp SBCCCCSSSEEEEEECBS--SSCEEEEEGGGTEEE----------------EECBTSCEEEEEECCS-CBCCEEBCCSCC
T ss_pred ceEEEeCCCEEEEEEEeC--CccceeeecccCcEE----------------eecCCcceeeEEecCC-CeEEEEeccccc
Confidence 467889999999988754 457788777554433 2346777888888887 699999998654
Q ss_pred C
Q 009854 256 D 256 (524)
Q Consensus 256 ~ 256 (524)
.
T Consensus 212 G 212 (315)
T 1fft_B 212 G 212 (315)
T ss_dssp S
T ss_pred h
Confidence 4
No 154
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=31.16 E-value=44 Score=30.15 Aligned_cols=50 Identities=22% Similarity=0.353 Sum_probs=33.8
Q ss_pred cEEEEecCCEEEEEEEeCCCC------CceEEecCccccCCCCCCCCCccccccCCCCCceEE
Q 009854 23 PTIVAREDDTVLVKVVNHVKY------NVSIHWHGVRQLRTCWADGPAYITQCPIQPGQNYIY 79 (524)
Q Consensus 23 P~i~~~~Gd~v~v~l~N~l~~------~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y 79 (524)
-+|+.+-|-+|.|.|.|..+. +.++...|...... .-++.-+.||+++|.
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~-------aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHT-------AGSQLRLSPGESICL 184 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEEC-------TTCEEEECTTCEEEE
T ss_pred ccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeC-------CCCEEEECCCCeEec
Confidence 478889999999999998643 45555555543332 123456889998765
No 155
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=30.39 E-value=70 Score=25.79 Aligned_cols=69 Identities=22% Similarity=0.220 Sum_probs=38.5
Q ss_pred EEEcCcCCCcEEEEecCCEEEEEEE---eCCCCCceEEe----cCccccC-CCCCCCCCccccccCCCCCceEEEEEe
Q 009854 14 VTVNGYFPGPTIVAREDDTVLVKVV---NHVKYNVSIHW----HGVRQLR-TCWADGPAYITQCPIQPGQNYIYNFTL 83 (524)
Q Consensus 14 ~~~NG~~pgP~i~~~~Gd~v~v~l~---N~l~~~~~iH~----HG~~~~~-~~~~DG~~~~~q~~i~PG~~~~y~~~~ 83 (524)
..++|= +.+.=.++.|+.+.+.+. |.......... -|+.++. ....|+=..-..|||..|+.++|.+.+
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~l 94 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKL 94 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEe
Confidence 455552 134466788998887776 22222222222 3444321 111344211236999999999999877
No 156
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=28.29 E-value=55 Score=25.96 Aligned_cols=34 Identities=21% Similarity=0.445 Sum_probs=28.2
Q ss_pred EEEeCCceeEEEEeechHhhhccceEEE-EEcCCC
Q 009854 475 RFRADNPGVWFMHCHLEVHTTWGLKMAF-IVDNGK 508 (524)
Q Consensus 475 rf~adnpG~w~~HCHil~H~d~GM~~~~-~V~~~~ 508 (524)
.|..+.+|.+-|=|=...|=..||-+.+ .|....
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 4556889999999999999999999999 887543
No 157
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=27.53 E-value=20 Score=27.52 Aligned_cols=25 Identities=16% Similarity=0.044 Sum_probs=21.8
Q ss_pred ccEEEEcCcCCCcEEEEecCCEEEE
Q 009854 11 KPIVTVNGYFPGPTIVAREDDTVLV 35 (524)
Q Consensus 11 ~~~~~~NG~~pgP~i~~~~Gd~v~v 35 (524)
...+.+||+.-.+.-.+++||+|+|
T Consensus 58 ~~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 58 TNKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp TSEEEEEECSCCTTCBCCTTCEEEE
T ss_pred ccEEEEcCEECCCCccCCCCCEEEE
Confidence 4578999998778888999999998
No 158
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=27.24 E-value=2.2e+02 Score=22.37 Aligned_cols=68 Identities=10% Similarity=0.015 Sum_probs=37.4
Q ss_pred CcEEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCC----cc----ccccCCCCCceEEEEEeCCcccce
Q 009854 22 GPTIVAREDDTVLVKVVNHVKYNVSIHWHGVRQLRTCWADGPA----YI----TQCPIQPGQNYIYNFTLAGQRGTL 90 (524)
Q Consensus 22 gP~i~~~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG~~----~~----~q~~i~PG~~~~y~~~~~~~~Gt~ 90 (524)
|-+|.++.||++.|.|.-+-....+-......-...--.+|.. .. ..-.+..|....+.|++ -++|+.
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~~ 89 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGHH 89 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSSE
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCceE
Confidence 4579999999999999866544333333321100000011110 00 01125667788889988 667763
No 159
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=26.02 E-value=90 Score=24.92 Aligned_cols=59 Identities=20% Similarity=0.247 Sum_probs=36.8
Q ss_pred EEEEecC-CEEEEEEEeCCCCCceE--EecCccccCCCCCC-----C----CCccccccCCCCCceEEEEE
Q 009854 24 TIVARED-DTVLVKVVNHVKYNVSI--HWHGVRQLRTCWAD-----G----PAYITQCPIQPGQNYIYNFT 82 (524)
Q Consensus 24 ~i~~~~G-d~v~v~l~N~l~~~~~i--H~HG~~~~~~~~~D-----G----~~~~~q~~i~PG~~~~y~~~ 82 (524)
.|.+++| ++++|+|.|..+.|..+ |+|=.++.+.-..| | .|.-|..-+.||++.+.+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 5788888 58999999999888775 66655544321122 1 22222344667777776664
No 160
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=26.02 E-value=90 Score=24.92 Aligned_cols=59 Identities=20% Similarity=0.247 Sum_probs=36.8
Q ss_pred EEEEecC-CEEEEEEEeCCCCCceE--EecCccccCCCCCC-----C----CCccccccCCCCCceEEEEE
Q 009854 24 TIVARED-DTVLVKVVNHVKYNVSI--HWHGVRQLRTCWAD-----G----PAYITQCPIQPGQNYIYNFT 82 (524)
Q Consensus 24 ~i~~~~G-d~v~v~l~N~l~~~~~i--H~HG~~~~~~~~~D-----G----~~~~~q~~i~PG~~~~y~~~ 82 (524)
.|.+++| ++++|+|.|..+.|..+ |+|=.++.+.-..| | .|.-|..-+.||++.+.+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 5788888 58999999999888775 66655544321122 1 22222344667777776664
No 161
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=25.19 E-value=1.2e+02 Score=27.10 Aligned_cols=76 Identities=11% Similarity=0.243 Sum_probs=51.4
Q ss_pred ceEEEccCCCEEEEEEEcCCCCCCCCCCeeecCcceEEEeecCCCCCCCCCCCCCCCCCCCcCceeEecCCcEEEEEEEe
Q 009854 399 TRIYRLPYNSTVQLVLQDTGMIAPENHPLHLHGFNFFEVGRGLGNFNSKKDPKKFNLVDPVERNTIGVPSGGWTAIRFRA 478 (524)
Q Consensus 399 ~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 478 (524)
.+.+.++.|+.+++.+.. .+..|.|-+=.... ..|. -||-.-.+.|.+
T Consensus 139 dn~lvlP~~~~Vr~~vtS----~DViHsf~vP~lg~-------------------------K~Da---iPGr~n~~~~~~ 186 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSS----EDVLHSWAVPSLGL-------------------------KTDA---IPGRLNQTTLMS 186 (227)
T ss_dssp SSCEEEETTSCEEEEEEE----SSSCEEEEEGGGTE-------------------------EEEE---CTTCCEEEEECC
T ss_pred CceEEEecCCEEEEEEEe----CcccceeeecccCc-------------------------EEEe---cCCceEEEEEec
Confidence 345788999999999987 35666666543322 1232 245556688999
Q ss_pred CCceeEEEEeechHhh-hccceEEEEEcC
Q 009854 479 DNPGVWFMHCHLEVHT-TWGLKMAFIVDN 506 (524)
Q Consensus 479 dnpG~w~~HCHil~H~-d~GM~~~~~V~~ 506 (524)
+.||.|...|.-.-.. +.-|-..++|.+
T Consensus 187 ~~~G~y~g~Cse~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 187 SRPGLYYGQCSEICGSNHSFMPIVLELVP 215 (227)
T ss_dssp SSCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred CCcEEEEEEehhhcccccccCeEEEEEEc
Confidence 9999999999866544 445655666554
No 162
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=24.11 E-value=94 Score=25.47 Aligned_cols=33 Identities=21% Similarity=0.442 Sum_probs=28.8
Q ss_pred EEe-CCceeEEEEeechHhhhccceEEEEEcCCC
Q 009854 476 FRA-DNPGVWFMHCHLEVHTTWGLKMAFIVDNGK 508 (524)
Q Consensus 476 f~a-dnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 508 (524)
|.. +.+|.+-|=|=+..|=..||-+.+.|....
T Consensus 77 v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~ 110 (138)
T 1jer_A 77 IERLDELGMHYFVCTVGTHCSNGQKLSINVVAAN 110 (138)
T ss_dssp EEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC
T ss_pred EEeccCCcCEEEEcCCCCccccCCEEEEEEcCCC
Confidence 455 789999999999999999999999998654
No 163
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=23.82 E-value=2.1e+02 Score=27.38 Aligned_cols=68 Identities=24% Similarity=0.252 Sum_probs=43.6
Q ss_pred CEEEEEEEecCCCCeEEE-E---Ec---CceeeEEEecCcccc----------eeEecEEEeCCCceEEEEEEeCC----
Q 009854 184 KTYMLRLINAALNEELFF-K---IA---GHKLTVVEVDAAYVK----------PFKTETVLIAPGQTTNVLLSAAH---- 242 (524)
Q Consensus 184 ~~~rlRliN~~~~~~~~~-~---l~---gh~~~via~DG~~~~----------P~~~d~v~l~pgeR~dv~v~~~~---- 242 (524)
-.+..-|-|.|.. .+.| + ++ -..|.| ..||..++ |-.-+-+.|+|||.+++.|+...
T Consensus 38 ~~vk~tvtN~g~~-~~~lLk~~~lD~~~~~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydL 115 (343)
T 2x3c_A 38 VRVNLTLTNTGDK-PIRLLKWQLPGSDDAPLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDM 115 (343)
T ss_dssp CEEEEEEEECSSS-CEEEEGGGSCSSSCCCCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTC
T ss_pred eEEEEEEEeCCCC-ceEeeccCCCCcCccceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhcccc
Confidence 4566777777743 3332 1 22 234555 46776541 22247899999999999999865
Q ss_pred -CCCceEEEEee
Q 009854 243 -ATGKYLVAASP 253 (524)
Q Consensus 243 -~~g~~~~~~~~ 253 (524)
.+|+|.+++..
T Consensus 116 s~gG~y~v~~~g 127 (343)
T 2x3c_A 116 SAQGQYSIRYQL 127 (343)
T ss_dssp CSCEEEEEEEC-
T ss_pred CCCceEEEEEee
Confidence 24789988763
No 164
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=22.94 E-value=56 Score=26.41 Aligned_cols=49 Identities=10% Similarity=0.173 Sum_probs=30.1
Q ss_pred EEEEEEEecCCCCeEEEEEcCceeeEEEecCcccc----eeEecEEEeCCCceEEE
Q 009854 185 TYMLRLINAALNEELFFKIAGHKLTVVEVDAAYVK----PFKTETVLIAPGQTTNV 236 (524)
Q Consensus 185 ~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~----P~~~d~v~l~pgeR~dv 236 (524)
.|++||-|.+.. .+.|-...|.+...||..-+ .+....=.|.|||.+..
T Consensus 31 aY~I~I~N~~~~---~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Y 83 (126)
T 1xvs_A 31 AYLITIKNLSSQ---TVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTY 83 (126)
T ss_dssp EEEEEEEECSSS---CEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEE
T ss_pred EEEEEEEECCCC---CEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEE
Confidence 478999999943 34566667777776665321 11123447888886654
No 165
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=22.39 E-value=30 Score=24.76 Aligned_cols=26 Identities=8% Similarity=0.128 Sum_probs=21.5
Q ss_pred cccEEEEcCcC-CCcEEEEecCCEEEE
Q 009854 10 TKPIVTVNGYF-PGPTIVAREDDTVLV 35 (524)
Q Consensus 10 ~~~~~~~NG~~-pgP~i~~~~Gd~v~v 35 (524)
..-.+.+||++ ++..-.+++||+|.|
T Consensus 41 ~~~~vavN~~~v~~~~~~l~~gDeV~i 67 (74)
T 3rpf_C 41 GVCAIALNDHLIDNLNTPLKDGDVISL 67 (74)
T ss_dssp TTCEEEESSSEECCTTCCCCTTCEEEE
T ss_pred hccEEEECCEEcCCCCcCCCCCCEEEE
Confidence 34678999998 888788999999876
No 166
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=20.70 E-value=1.7e+02 Score=28.46 Aligned_cols=17 Identities=18% Similarity=0.243 Sum_probs=14.7
Q ss_pred ccccCCCCCceEEEEEe
Q 009854 67 TQCPIQPGQNYIYNFTL 83 (524)
Q Consensus 67 ~q~~i~PG~~~~y~~~~ 83 (524)
+..||+|||+.+.+.++
T Consensus 350 s~~pI~PGETrt~~V~a 366 (419)
T 3rfr_A 350 NDDVIAPGESKEIVVKI 366 (419)
T ss_dssp CCCCBCTTCEEEEEEEE
T ss_pred CCCCcCCCcceEEEEEe
Confidence 44499999999999988
No 167
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=20.55 E-value=89 Score=25.23 Aligned_cols=49 Identities=14% Similarity=0.237 Sum_probs=29.2
Q ss_pred EEEEEEEecCCCCeEEEEEcCceeeEEEecCccc----ceeEecEEEeCCCceEEE
Q 009854 185 TYMLRLINAALNEELFFKIAGHKLTVVEVDAAYV----KPFKTETVLIAPGQTTNV 236 (524)
Q Consensus 185 ~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~----~P~~~d~v~l~pgeR~dv 236 (524)
.|++||-|.+.. .+.|-...|.+...||..- +.+....=.|.|||.+..
T Consensus 32 aY~I~I~N~~~~---~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Y 84 (127)
T 2f1e_A 32 AYSIRIQNAGAV---PARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHY 84 (127)
T ss_dssp EEEEEEEECSSS---CEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEE
T ss_pred EEEEEEEeCCCC---CEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEE
Confidence 478999999843 2455556677766666532 011123346888886554
Done!