BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009859
(523 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q43644|NDUS1_SOLTU NADH dehydrogenase [ubiquinone] iron-sulfur protein 1,
mitochondrial OS=Solanum tuberosum PE=2 SV=1
Length = 738
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/521 (83%), Positives = 477/521 (91%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
CVRFA+EVAGV+DLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR
Sbjct: 218 CVRFASEVAGVEDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 277
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
NWELKGTE+IDVTDAVGSNIRIDSRGPEVMR++PRLNEDINEEWISDKTRF YDGLK QR
Sbjct: 278 NWELKGTESIDVTDAVGSNIRIDSRGPEVMRVVPRLNEDINEEWISDKTRFFYDGLKRQR 337
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
LNDPMIRGADGRF+AV+WRDALA+VAEVM Q KPEEIVG+AG+LSDAESMMALKD LN+M
Sbjct: 338 LNDPMIRGADGRFQAVSWRDALAIVAEVMHQIKPEEIVGVAGKLSDAESMMALKDLLNKM 397
Query: 182 GSNNVWCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKTVR 241
GSNN++CEG G NADLRSGYIMNTSISGLEKAD FLLVGTQPRVEAAMVNARI KTV+
Sbjct: 398 GSNNIFCEGNGMHPNADLRSGYIMNTSISGLEKADAFLLVGTQPRVEAAMVNARIHKTVK 457
Query: 242 ANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLFER 301
A NAKVGY+GPA D NYDH+HLGT P+TL+EIAEGRHPF SA+ NAKNPVIIVGAG+F+R
Sbjct: 458 ATNAKVGYVGPAADFNYDHEHLGTDPQTLVEIAEGRHPFSSALKNAKNPVIIVGAGVFDR 517
Query: 302 KDKDAIFSTVEAIAKKGNVIRPDWNGLNVLLLNAAQAAALDLGLVPESSNSIESAKFVYL 361
DKDA+F+ V+ IAK NV+RPDWNGLNVLLLNAAQ AALDLGLVPES IESAKFVYL
Sbjct: 518 DDKDAVFAAVDTIAKNNNVVRPDWNGLNVLLLNAAQVAALDLGLVPESDKCIESAKFVYL 577
Query: 362 MGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEGCTQQTLPA 421
MGADDV+L+KLP+DAFVVYQGHHGD GVYRANVILPASAF+EKEG YENTEGC Q TLPA
Sbjct: 578 MGADDVNLDKLPDDAFVVYQGHHGDRGVYRANVILPASAFTEKEGIYENTEGCAQITLPA 637
Query: 422 VPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPATLGPSLK 481
VPTVGDARDDWKI+RALSEVAG+ LPYD++G IRSRI+TVAPNLL VDER+PAT SL+
Sbjct: 638 VPTVGDARDDWKIVRALSEVAGVGLPYDSLGAIRSRIKTVAPNLLEVDERQPATFSTSLR 697
Query: 482 PEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQCSAMLLK 522
PE+ ++ TPF AVENFYMTD+ITRASK MAQCSA+L K
Sbjct: 698 PEVSQKVSATPFTPAVENFYMTDAITRASKIMAQCSALLKK 738
>sp|Q9FGI6|NDUS1_ARATH NADH dehydrogenase [ubiquinone] iron-sulfur protein 1,
mitochondrial OS=Arabidopsis thaliana GN=EMB1467 PE=1
SV=2
Length = 748
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/522 (80%), Positives = 472/522 (90%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
CVRFA+EVAGVQDLG+LGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR
Sbjct: 224 CVRFASEVAGVQDLGILGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 283
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
NWELK TETIDV+DAVGSNIR+DSRGPEVMRI+PRLNEDINEEWISDKTRFCYDGLK QR
Sbjct: 284 NWELKATETIDVSDAVGSNIRVDSRGPEVMRIIPRLNEDINEEWISDKTRFCYDGLKRQR 343
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L+DPMIR +DGRFKAV+WRDALAVV +++ Q KP+EIVG+AG+LSDAESMM LKDF+NRM
Sbjct: 344 LSDPMIRDSDGRFKAVSWRDALAVVGDIIHQVKPDEIVGVAGQLSDAESMMVLKDFVNRM 403
Query: 182 GSNNVWCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKTVR 241
GS+NVWCEGT A +ADLR Y+MNTSISGLE AD FLL+GTQPRVEAAMVNARI KTVR
Sbjct: 404 GSDNVWCEGTAAGVDADLRYSYLMNTSISGLENADLFLLIGTQPRVEAAMVNARICKTVR 463
Query: 242 ANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLFER 301
A+NAKVGY+GP + NYD +HLGTGP TL EIAEGRHPF +A+ NAKNP IIVGAGLF R
Sbjct: 464 ASNAKVGYVGPPAEFNYDCKHLGTGPDTLKEIAEGRHPFCTALKNAKNPAIIVGAGLFNR 523
Query: 302 KDKDAIFSTVEAIAKKGNVIRPDWNGLNVLLLNAAQAAALDLGLVPESSNSIESAKFVYL 361
DK+AI S+VE+IA+ NV+RPDWNGLN LL AAQAAALDLGL+ +S+ ++ESAKFVYL
Sbjct: 524 TDKNAILSSVESIAQANNVVRPDWNGLNFLLQYAAQAAALDLGLIQQSAKALESAKFVYL 583
Query: 362 MGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEGCTQQTLPA 421
MGADDV+++K+P DAFVVYQGHHGD VYRANVILPASAF+EKEGTYENTEG TQQT+PA
Sbjct: 584 MGADDVNVDKIPKDAFVVYQGHHGDKAVYRANVILPASAFTEKEGTYENTEGFTQQTVPA 643
Query: 422 VPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPATLGPSLK 481
VPTVGDARDDWKI+RALSEV+G++LPY++I G+RSRI++VAPNL+H DEREPA GPSLK
Sbjct: 644 VPTVGDARDDWKIVRALSEVSGVKLPYNSIEGVRSRIKSVAPNLVHTDEREPAAFGPSLK 703
Query: 482 PEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQCSAMLLKK 523
PE K M TPF + VENFYMT+SITRASK MAQCSA+LLKK
Sbjct: 704 PECKEAMSTTPFQTVVENFYMTNSITRASKIMAQCSAVLLKK 745
>sp|P15690|NDUS1_BOVIN NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Bos
taurus GN=NDUFS1 PE=1 SV=1
Length = 727
Score = 527 bits (1357), Expect = e-149, Method: Compositional matrix adjust.
Identities = 272/530 (51%), Positives = 357/530 (67%), Gaps = 16/530 (3%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C+RFA+E+AGV DLG GRG+ ++GTY+EK+ SELSGN+IDICPVGALTSKP+AF AR
Sbjct: 182 CIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTAR 241
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WE + TE+IDV DAVGSNI + +R EVMRILPR++EDINEEWISDKTRF YDGLK QR
Sbjct: 242 PWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQR 301
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L +PM+R G W DAL+ VA ++ + ++ IAG L DAE+++ALKD LNR+
Sbjct: 302 LTEPMVRNEKGLLTHTTWEDALSRVAGMLQSFQGNDVAAIAGGLVDAEALIALKDLLNRV 361
Query: 182 GSNNVWCEGT--GAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKT 239
S+ + E A + DLRS Y++NT+I+G+E+AD LLVGT PR EA + NARIRK+
Sbjct: 362 DSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKS 421
Query: 240 VRANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLF 299
N+ KV IG DL Y + HLG PK L +IA G HPF + AK P++I+G+
Sbjct: 422 WLHNDLKVALIGSPVDLTYRYDHLGDSPKILQDIASGSHPFSQVLQEAKKPMVILGSSAL 481
Query: 300 ERKDKDAIFSTVEAIAKK---GNVIRPDWNGLNVLLLNAAQAAALDLGLVPESSNSIES- 355
+R D AI + V IA+K + + DW +N+L A+Q AALDLG P +I+
Sbjct: 482 QRNDGAAILAAVSNIAQKIRTSSGVTGDWKVMNILHRIASQVAALDLGYKP-GVEAIQKN 540
Query: 356 -AKFVYLMGADD--VDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTE 412
K ++L+GAD + + LP D F+VYQGHHGD G A+VILP +A++EK TY NTE
Sbjct: 541 PPKMLFLLGADGGCITRQDLPKDCFIVYQGHHGDVGAPIADVILPGAAYTEKSATYVNTE 600
Query: 413 GCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDERE 472
G QQT AV G AR+DWKIIRALSE+AGM LPYDT+ +R+R+ V+PNL+ D+ E
Sbjct: 601 GRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDVE 660
Query: 473 PATL---GPSLKPEIKSEM---DLTPFGSAVENFYMTDSITRASKTMAQC 516
A L + ++ L P +++FYMTDSI+RAS+TMA+C
Sbjct: 661 GANYFQQASELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKC 710
>sp|P28331|NDUS1_HUMAN NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
OS=Homo sapiens GN=NDUFS1 PE=1 SV=3
Length = 727
Score = 526 bits (1354), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/529 (50%), Positives = 358/529 (67%), Gaps = 14/529 (2%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C+RFA+E+AGV DLG GRG+ ++GTY+EK+ SELSGN+IDICPVGALTSKP+AF AR
Sbjct: 182 CIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTAR 241
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WE + TE+IDV DAVGSNI + +R EVMRILPR++EDINEEWISDKTRF YDGLK QR
Sbjct: 242 PWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQR 301
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L +PM+R G +W DAL+ VA ++ + +++ IAG L DAE+++ALKD LNR+
Sbjct: 302 LTEPMVRNEKGLLTYTSWEDALSRVAGMLQSFQGKDVAAIAGGLVDAEALVALKDLLNRV 361
Query: 182 GSNNVWCEGT--GAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKT 239
S+ + E A + DLRS Y++NT+I+G+E+AD LLVGT PR EA + NARIRK+
Sbjct: 362 DSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKS 421
Query: 240 VRANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLF 299
N+ KV IG DL Y + HLG PK L +IA G HPF + AK P++++G+
Sbjct: 422 WLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASGSHPFSQVLKEAKKPMVVLGSSAL 481
Query: 300 ERKDKDAIFSTVEAIAKKGNV---IRPDWNGLNVLLLNAAQAAALDLGLVP-ESSNSIES 355
+R D AI + V +IA+K + + DW +N+L A+Q AALDLG P +
Sbjct: 482 QRNDGAAILAAVSSIAQKIRMTSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKNP 541
Query: 356 AKFVYLMGADD--VDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEG 413
K ++L+GAD + + LP D F++YQGHHGD G A+VILP +A++EK TY NTEG
Sbjct: 542 PKVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEG 601
Query: 414 CTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREP 473
QQT AV G AR+DWKIIRALSE+AGM LPYDT+ +R+R+ V+PNL+ D+ E
Sbjct: 602 RAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDIEG 661
Query: 474 ATL---GPSLKPEIKSEM---DLTPFGSAVENFYMTDSITRASKTMAQC 516
A L + ++ L P +++FYMTDSI+RAS+TMA+C
Sbjct: 662 ANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKC 710
>sp|Q0MQG2|NDUS1_PANTR NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Pan
troglodytes GN=NDUFS1 PE=2 SV=1
Length = 727
Score = 525 bits (1351), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/529 (50%), Positives = 358/529 (67%), Gaps = 14/529 (2%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C+RFA+E+AGV DLG GRG+ ++GTY+EK+ SELSGN+IDICPVGALTSKP+AF AR
Sbjct: 182 CIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTAR 241
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WE + TE+IDV DAVGSNI + +R EVMRILPR++EDINEEWISDKTRF YDGLK QR
Sbjct: 242 PWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQR 301
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L +PM+R G +W DAL+ VA ++ + +++ IAG L DAE+++ALKD LNR+
Sbjct: 302 LTEPMVRNEKGLLTYTSWEDALSRVAGMLQTFQGKDVAAIAGGLVDAEALVALKDLLNRV 361
Query: 182 GSNNVWCEGT--GAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKT 239
S+ + E A + DLRS Y++NT+I+G+E+AD LLVGT PR EA + NAR+RK+
Sbjct: 362 DSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARLRKS 421
Query: 240 VRANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLF 299
N+ KV IG DL Y + HLG PK L +IA G HPF + AK P++++G+
Sbjct: 422 WLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASGSHPFSQVLKEAKKPMVVLGSSAL 481
Query: 300 ERKDKDAIFSTVEAIAKKGNV---IRPDWNGLNVLLLNAAQAAALDLGLVP-ESSNSIES 355
+R D AI + V +IA+K + + DW +N+L A+Q AALDLG P +
Sbjct: 482 QRNDGAAILAAVSSIAQKIRMTSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKNP 541
Query: 356 AKFVYLMGADD--VDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEG 413
K ++L+GAD + + LP D F++YQGHHGD G A+VILP +A++EK TY NTEG
Sbjct: 542 PKVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEG 601
Query: 414 CTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREP 473
QQT AV G AR+DWKIIRALSE+AGM LPYDT+ +R+R+ V+PNL+ D+ E
Sbjct: 602 RAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDIEG 661
Query: 474 ATL---GPSLKPEIKSEM---DLTPFGSAVENFYMTDSITRASKTMAQC 516
A L + ++ L P +++FYMTDSI+RAS+TMA+C
Sbjct: 662 ANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKC 710
>sp|P0CB68|NDUS1_PONPY NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
OS=Pongo pygmaeus GN=NDUFS1 PE=2 SV=1
Length = 727
Score = 523 bits (1348), Expect = e-147, Method: Compositional matrix adjust.
Identities = 267/529 (50%), Positives = 358/529 (67%), Gaps = 14/529 (2%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C+RFA+E+AGV DLG GRG+ ++GTY+EK+ SELSGN+IDICPVGALTSKP+AF AR
Sbjct: 182 CIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTAR 241
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WE + TE+IDV DAVGSNI + +R EVMRILPR++EDINEEWISDKTRF YDGLK QR
Sbjct: 242 PWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQR 301
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L +PM+R G +W DAL+ VA ++ + +++ IAG L DAE+++ALKD LNR+
Sbjct: 302 LTEPMVRNEKGLLTYTSWEDALSRVAGMLQSFQGKDVAAIAGGLVDAEALVALKDLLNRV 361
Query: 182 GSNNVWCEGT--GAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKT 239
S+ + E A + DLRS Y++NT+I+G+E+AD LLVGT PR EA + NARIRK+
Sbjct: 362 DSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKS 421
Query: 240 VRANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLF 299
N+ KV IG DL Y + HLG PK L +IA G HPF + AK P++++G+
Sbjct: 422 WLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASGSHPFSQVLKEAKKPMVVLGSSAL 481
Query: 300 ERKDKDAIFSTVEAIAKKGNV---IRPDWNGLNVLLLNAAQAAALDLGLVP-ESSNSIES 355
+R D AI + V +IA+K + + DW +N+L A+Q AALDLG P +
Sbjct: 482 QRNDGAAILAAVSSIAQKIRMTSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKNP 541
Query: 356 AKFVYLMGADD--VDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEG 413
+ ++L+GAD + + LP D F++YQGHHGD G A+VILP +A++EK TY NTEG
Sbjct: 542 PRLLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEG 601
Query: 414 CTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREP 473
QQT AV G AR+DWKIIRALSE+AG+ LPYDT+ +R+R+ V+PNL+ D+ E
Sbjct: 602 RAQQTKVAVTPPGLAREDWKIIRALSEIAGVTLPYDTLDQVRNRLEEVSPNLVRYDDIEG 661
Query: 474 ATL---GPSLKPEIKSEM---DLTPFGSAVENFYMTDSITRASKTMAQC 516
A L + ++ L P +++FYMTDSI+RAS+TMA+C
Sbjct: 662 ANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKC 710
>sp|Q0MQG1|NDUS1_GORGO NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
OS=Gorilla gorilla gorilla GN=NDUFS1 PE=2 SV=1
Length = 727
Score = 523 bits (1348), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/529 (50%), Positives = 357/529 (67%), Gaps = 14/529 (2%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C+RFA+E+AGV DLG GRG+ ++GTY+EK+ SELSGN+IDICPVGALTSKP+AF AR
Sbjct: 182 CIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTAR 241
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WE + TE+IDV DAVGSNI + +R EVMRILPR++EDINE WISDKTRF YDGLK QR
Sbjct: 242 PWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEXWISDKTRFAYDGLKRQR 301
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L +PM+R G +W DAL+ VA ++ + +++ IAG L DAE+++ALKD LNR+
Sbjct: 302 LTEPMVRNEKGLLTYTSWEDALSRVAGMLQSFQGKDVAAIAGGLVDAEALVALKDLLNRV 361
Query: 182 GSNNVWCEGT--GAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKT 239
S+ + E A + DLRS Y++NT+I+G+E+AD LLVGT PR EA + NARIRK+
Sbjct: 362 DSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKS 421
Query: 240 VRANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLF 299
N+ KV IG DL Y + HLG PK L +IA G HPF + AK P++++G+
Sbjct: 422 WLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASGSHPFSQVLKEAKKPMVVLGSSAL 481
Query: 300 ERKDKDAIFSTVEAIAKKGNV---IRPDWNGLNVLLLNAAQAAALDLGLVP-ESSNSIES 355
+R D AI + V +IA+K + + DW +N+L A+Q AALDLG P +
Sbjct: 482 QRNDGAAILAAVSSIAQKIRMTSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKNP 541
Query: 356 AKFVYLMGADD--VDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEG 413
K ++L+GAD + + LP D F++YQGHHGD G A+VILP +A++EK TY NTEG
Sbjct: 542 PKVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEG 601
Query: 414 CTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREP 473
QQT AV G AR+DWKIIRALSE+AGM LPYDT+ +R+R+ V+PNL+ D+ E
Sbjct: 602 RAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDIEG 661
Query: 474 ATL---GPSLKPEIKSEM---DLTPFGSAVENFYMTDSITRASKTMAQC 516
A L + ++ L P +++FYMTDSI+RAS+TMA+C
Sbjct: 662 ANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKC 710
>sp|Q4R6K9|NDUS1_MACFA NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
OS=Macaca fascicularis GN=NDUFS1 PE=2 SV=1
Length = 727
Score = 523 bits (1346), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/529 (50%), Positives = 357/529 (67%), Gaps = 14/529 (2%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C+RFA+E+AGV DLG GRG+ ++GTY+EK+ SELSGN+IDICPVGALTSKP+AF AR
Sbjct: 182 CIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTAR 241
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WE + TE+IDV DAVGSNI + +R EVMRILPR++EDINEEWISDKTRF YDGLK QR
Sbjct: 242 PWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQR 301
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L +PMIR G +W DAL+ VA ++ + +++ IAG L DAE+++ALKD LNR+
Sbjct: 302 LTEPMIRNEKGLLTYTSWEDALSRVAGMLQSFQGKDVAAIAGGLVDAEALVALKDLLNRV 361
Query: 182 GSNNVWCEGT--GAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKT 239
S+ + E A + DLRS Y++NT+I+G+E+AD LLVGT PR E + NARIRK+
Sbjct: 362 DSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEVPLFNARIRKS 421
Query: 240 VRANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLF 299
N+ KV IG DL Y + HLG PK L +IA G HPF + AK P++++G+
Sbjct: 422 WLHNDLKVALIGSPVDLTYRYDHLGDSPKILQDIASGSHPFSQVLKEAKKPMVVLGSSAL 481
Query: 300 ERKDKDAIFSTVEAIAKKGNV---IRPDWNGLNVLLLNAAQAAALDLGLVP-ESSNSIES 355
+R D AI + V +IA+K + + DW +N+L A+Q AALDLG P +
Sbjct: 482 QRNDGAAILAAVSSIAQKIRMTSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKNP 541
Query: 356 AKFVYLMGADD--VDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEG 413
K ++L+GAD + + LP D F++YQGHHGD G A+VILP +A++EK TY NTEG
Sbjct: 542 PKVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEG 601
Query: 414 CTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREP 473
QQT AV G AR+DWKIIRALSE+AG+ LPYDT+ +R+R+ V+PNL+ D+ E
Sbjct: 602 RAQQTKVAVTPPGLAREDWKIIRALSEIAGITLPYDTLDQVRNRLEEVSPNLVRYDDIEG 661
Query: 474 ATL---GPSLKPEIKSEM---DLTPFGSAVENFYMTDSITRASKTMAQC 516
A L + ++ L P +++FYMTDSI+RAS+TMA+C
Sbjct: 662 ANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKC 710
>sp|P0CB67|NDUS1_PONAB NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
OS=Pongo abelii GN=NDUFS1 PE=2 SV=1
Length = 727
Score = 521 bits (1342), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/529 (50%), Positives = 357/529 (67%), Gaps = 14/529 (2%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C+RFA+E+AGV DLG GRG+ ++GTY+EK+ SELSGN+IDICPVGALTSKP+AF AR
Sbjct: 182 CIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTAR 241
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WE + TE+IDV DAVGSNI + +R EVMRILPR++EDINEEWISDKTRF YDGLK QR
Sbjct: 242 PWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQR 301
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L +PM+R G +W DAL+ VA ++ + +++ IAG L DAE+++ALKD LNR+
Sbjct: 302 LTEPMVRNEKGLLTYTSWEDALSRVAGMLQSFQGKDVAAIAGGLVDAEALVALKDLLNRV 361
Query: 182 GSNNVWCEGT--GAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKT 239
S+ + E A + DLRS Y++NT+I+G+E+AD LLVGT PR EA + NARIRK+
Sbjct: 362 DSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKS 421
Query: 240 VRANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLF 299
N+ KV IG DL Y + HLG PK L +IA G HPF + AK P++++G+
Sbjct: 422 WLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASGSHPFSQVLKEAKKPMVVLGSSAL 481
Query: 300 ERKDKDAIFSTVEAIAKKGNV---IRPDWNGLNVLLLNAAQAAALDLGLVP-ESSNSIES 355
+R D AI + +IA+K + + DW +N+L A+Q AALDLG P +
Sbjct: 482 QRNDGAAILAAFSSIAQKIRMTSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKNP 541
Query: 356 AKFVYLMGADD--VDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEG 413
+ ++L+GAD + + LP D F++YQGHHGD G A+VILP +A++EK TY NTEG
Sbjct: 542 PRLLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEG 601
Query: 414 CTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREP 473
QQT AV G AR+DWKIIRALSE+AG+ LPYDT+ +R+R+ V+PNL+ D+ E
Sbjct: 602 RAQQTKVAVTPPGLAREDWKIIRALSEIAGVTLPYDTLDQVRNRLEEVSPNLVRYDDIEG 661
Query: 474 ATL---GPSLKPEIKSEM---DLTPFGSAVENFYMTDSITRASKTMAQC 516
A L + ++ L P +++FYMTDSI+RAS+TMA+C
Sbjct: 662 ANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKC 710
>sp|Q91VD9|NDUS1_MOUSE NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus
musculus GN=Ndufs1 PE=1 SV=2
Length = 727
Score = 519 bits (1337), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/530 (50%), Positives = 357/530 (67%), Gaps = 16/530 (3%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C+RFA+E+AGV DLG GRG+ ++GTY+EK+ SELSGNVIDICPVGALTSKP+AF AR
Sbjct: 182 CIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNVIDICPVGALTSKPYAFTAR 241
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WE + TE+IDV DAVGSNI + +R EVMRILPR++EDINEEWISDKTRF YDGLK QR
Sbjct: 242 PWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQR 301
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L +PM+R G +W DAL+ VA ++ + + IAG L DAE+++ALKD LN++
Sbjct: 302 LTEPMVRNEKGLLTYTSWEDALSRVAGMLQNFEGNAVAAIAGGLVDAEALVALKDLLNKV 361
Query: 182 GSNNVWCEGTGAQSNA--DLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKT 239
S+N+ E A DLRS Y++NT+I+G+E+AD LLVGT PR EA + NARIRK+
Sbjct: 362 DSDNLCTEEIFPTEGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKS 421
Query: 240 VRANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLF 299
N+ KV IG DL Y + HLG PK L +IA GRH F + +AK P++++G+
Sbjct: 422 WLHNDLKVALIGSPVDLTYRYDHLGDSPKILQDIASGRHSFCEVLKDAKKPMVVLGSSAL 481
Query: 300 ERKDKDAIFSTVEAIAKKGNV---IRPDWNGLNVLLLNAAQAAALDLGLVP-ESSNSIES 355
+R D AI V + +K V + +W +N+L A+Q AALDLG P +
Sbjct: 482 QRDDGAAILVAVSNMVQKIRVTTGVAAEWKVMNILHRIASQVAALDLGYKPGVEAIRKNP 541
Query: 356 AKFVYLMGADD--VDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEG 413
K ++L+GAD + + LP D F+VYQGHHGD G A+VILP +A++EK TY NTEG
Sbjct: 542 PKMLFLLGADGGCITRQDLPKDCFIVYQGHHGDVGAPMADVILPGAAYTEKSATYVNTEG 601
Query: 414 CTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDE--- 470
QQT AV G AR+DWKIIRALSE+AG+ LPYDT+ +R+R+ V+PNL+ D+
Sbjct: 602 RAQQTKVAVTPPGLAREDWKIIRALSEIAGITLPYDTLDQVRNRLEEVSPNLVRYDDIEE 661
Query: 471 ----REPATLGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQC 516
++ + L + E+ ++ L P +++FYMTDSI+RAS+TMA+C
Sbjct: 662 TNYFQQASELAKLVNQEVLAD-PLVPPQLTIKDFYMTDSISRASQTMAKC 710
>sp|Q66HF1|NDUS1_RAT NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
OS=Rattus norvegicus GN=Ndufs1 PE=1 SV=1
Length = 727
Score = 516 bits (1329), Expect = e-145, Method: Compositional matrix adjust.
Identities = 268/529 (50%), Positives = 354/529 (66%), Gaps = 14/529 (2%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C+RFA+E+AGV DLG GRG+ ++GTY+EK+ SELSGN+IDICPVGALTSKP+AF AR
Sbjct: 182 CIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTAR 241
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WE + TE+IDV DAVGSNI + +R EVMRILPR++EDINEEWISDKTRF YDGLK QR
Sbjct: 242 PWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQR 301
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L +PM+R G +W DAL+ VA ++ + + + IAG L DAE+++ALKD LN++
Sbjct: 302 LTEPMVRNEKGLLTYTSWEDALSRVAGMLQSFEGKAVAAIAGGLVDAEALVALKDLLNKV 361
Query: 182 GSNNVWCEGTGAQSNA--DLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKT 239
S+ + E A DLRS Y++NT+I+G+E+AD LLVGT PR EA + NARIRK+
Sbjct: 362 DSDTLCTEEIFPNEGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKS 421
Query: 240 VRANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLF 299
N+ KV IG DL Y + HLG PK L +IA G H F ++ AK P++++G+
Sbjct: 422 WLHNDLKVALIGSPVDLTYRYDHLGDSPKILQDIASGNHEFSKVLNAAKKPMVVLGSSAL 481
Query: 300 ERKDKDAIFSTVEAIAKKGNVIR---PDWNGLNVLLLNAAQAAALDLGLVP-ESSNSIES 355
+R D AI + V +IA+K V +W +N+L A+Q AALDLG P +
Sbjct: 482 QRDDGAAILAAVSSIAQKIRVASGAAAEWKVMNILHRIASQVAALDLGYKPGVEAIRKNP 541
Query: 356 AKFVYLMGADD--VDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEG 413
K ++L+GAD + + LP D F+VYQGHHGD G A+VILP +A++EK TY NTEG
Sbjct: 542 PKLLFLLGADGGCITRQDLPKDCFIVYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEG 601
Query: 414 CTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREP 473
QQT AV G AR+DWKIIRALSE+AG+ LPYDT+ +R+R+ V+PNL+ D+ E
Sbjct: 602 RAQQTKVAVTPPGLAREDWKIIRALSEIAGITLPYDTLDQVRNRLGEVSPNLVRYDDVEE 661
Query: 474 ATL---GPSLKPEIKSEM---DLTPFGSAVENFYMTDSITRASKTMAQC 516
A L + E L P +++FYMTDSI+RAS+TMA+C
Sbjct: 662 ANYFQQASELAKLVDQEFLADPLVPPQLTIKDFYMTDSISRASQTMAKC 710
>sp|O21241|NDUS1_RECAM NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Reclinomonas
americana GN=NAD11 PE=3 SV=1
Length = 691
Score = 513 bits (1322), Expect = e-145, Method: Compositional matrix adjust.
Identities = 255/538 (47%), Positives = 352/538 (65%), Gaps = 22/538 (4%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
CVRFATEVAGV DLG +GRG EI TY++K+ SELSGNVID+CPVGALTSKP+AF AR
Sbjct: 152 CVRFATEVAGVPDLGTVGRGRDTEISTYIQKVFNSELSGNVIDLCPVGALTSKPYAFTAR 211
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
+WEL+ TE+IDV+DA+GSNIRID RG E+MRILPRLNED+NEEWISDK RFCYDGLK QR
Sbjct: 212 SWELQSTESIDVSDAIGSNIRIDVRGSEIMRILPRLNEDVNEEWISDKARFCYDGLKRQR 271
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAK-PEEIVGIAGRLSDAESMMALKDFLNR 180
LN+P+I+ +G++K V W A + + + + + IVG+ G L D ES++ K+ LN+
Sbjct: 272 LNNPIIK-ENGQYKTVTWEKAFNFILKNLQEIQNSNRIVGVVGNLMDVESILLFKELLNK 330
Query: 181 MGSNNVWCEGTG-------------AQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRV 227
+GS+ ++ E + +NAD R+ YI NT ++ +E++D LL+GT R+
Sbjct: 331 LGSSKIYLESSTPILQLNDDEKEDQILNNADFRNNYISNTPLAKIEESDLCLLIGTNIRL 390
Query: 228 EAAMVNARIRKTVRANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNA 287
EA ++N RIRK N V +GP +L Y+ ++LG TLLEI+EGRHPF + +
Sbjct: 391 EAPLLNTRIRKRYLQGNYSVYSVGPTNNLTYNTENLGNDISTLLEISEGRHPFCKKLMKS 450
Query: 288 KNPVIIVGAGLFERKDKDAIFSTVEAIAKKGNVIRPDWNGLNVLLLNAAQAAALDLGL-- 345
K P+II+G + +R D +I V+ + K + +WNG N+L +A+ ALDLG+
Sbjct: 451 KKPLIIIGTHVLQRTDGTSIIELVKTLFKYTQIKTSNWNGFNILHTSASSVGALDLGIGS 510
Query: 346 ----VPESSNSIESAKFVYLMGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAF 401
+ SNS F+YL+GAD++ +E + F+VYQGHHGD+G A+VILP SA+
Sbjct: 511 TKRYSEKISNSKIEKHFIYLLGADEIRIEN-SKEHFIVYQGHHGDYGANIADVILPGSAY 569
Query: 402 SEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTV 461
+EK TY N EG Q T A G+AR+DWKIIRALSEV +LPYD+ I +R ++
Sbjct: 570 TEKTATYVNVEGRVQNTKSAFYAPGNAREDWKIIRALSEVLNKKLPYDSFEDIHTRFMSI 629
Query: 462 APNLLHVDEREPATLGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQCSAM 519
AP+LL V+ E + K + F NFY+T++I R+S+TMA+CS++
Sbjct: 630 APHLLKVNAIEKNKIVIENSLPFKGLIKNIGFKPLFNNFYLTNAICRSSQTMAKCSSI 687
>sp|Q94511|NDUS1_DROME NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
OS=Drosophila melanogaster GN=ND75 PE=2 SV=3
Length = 731
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/529 (48%), Positives = 350/529 (66%), Gaps = 12/529 (2%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
CVRFA+E+AGV DLG GRG+ +IGTYVEKL +ELSGNVID+CPVGALT+KP++F AR
Sbjct: 196 CVRFASEIAGVDDLGTTGRGNDMQIGTYVEKLFLTELSGNVIDLCPVGALTNKPYSFVAR 255
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WE++ +IDV DAVGSNI + +R EV+RILPR NED+NEEW++DK+RF DGLK QR
Sbjct: 256 PWEIRKVSSIDVLDAVGSNIVVSTRTNEVLRILPRENEDVNEEWLADKSRFACDGLKRQR 315
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L PM+R +G +AV W AL VA+ + A +I GI+G+L+D E+ +ALKD LNR+
Sbjct: 316 LVAPMVRMPNGELQAVEWEGALIAVAKAIKAAG-GQIAGISGQLADLEAQVALKDLLNRL 374
Query: 182 GSNNVWCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKTVR 241
GS V E D R+ Y++N++I+GLE+AD LLVGT PR EA +VN R+RK
Sbjct: 375 GSEVVATEQGFIAGGTDNRANYLLNSTIAGLEEADAVLLVGTNPRYEAPLVNTRLRKAYV 434
Query: 242 ANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLFER 301
N ++ IGP DL+YDH++LG + ++ G H F + AK P II+GA L ER
Sbjct: 435 HNELQIASIGPKIDLSYDHENLGADAALVKDVCSGAHAFSKVLEGAKKPAIIIGADLLER 494
Query: 302 KDKDAIFSTVEAIAKKGNVIRPDWNGLNVLLLNAAQAAALDLGLVPESSNSIESA-KFVY 360
D AI +TV KK + +P+WN NVL NAAQ ALD+G + ++++ K ++
Sbjct: 495 ADGAAIHATVAEYCKK--LKKPNWNPFNVLQTNAAQVGALDVGYKAGAQTAVKAQPKVLF 552
Query: 361 LMGAD--DVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEGCTQQT 418
L+ AD V E+LP D FVVY G HGD+G A+ +LP +A++EK+G Y NTEG QQT
Sbjct: 553 LLNADAGKVTREQLPKDCFVVYIGSHGDNGASIADAVLPGAAYTEKQGIYVNTEGRPQQT 612
Query: 419 LPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPA---- 474
LP V G AR+DWKI+RALSEV G LPYD + +R+R+ VAP+L + + EPA
Sbjct: 613 LPGVSPPGMAREDWKILRALSEVVGKPLPYDNLDELRNRLEDVAPHLTRLGQLEPAGDAG 672
Query: 475 TLGPSLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQCSAMLLKK 523
G K +D+ + +++MTD+I+RAS TMA+C + + K+
Sbjct: 673 AAGTISKSIGGGAIDIKL--KELRDYFMTDAISRASPTMAKCISAVNKQ 719
>sp|P24918|NDUS1_NEUCR NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-78 PE=1 SV=2
Length = 744
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/531 (47%), Positives = 348/531 (65%), Gaps = 17/531 (3%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
CVRFA ++AG +LG GRG+ +IGTY+EK + SELSGNVID+CPVGALTSKP+AF+AR
Sbjct: 188 CVRFANDIAGAPELGSTGRGNDLQIGTYLEKNLDSELSGNVIDLCPVGALTSKPYAFRAR 247
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WELK TE+IDV D +GSNIR+D+RG EVMRILPRLN+++NEEWI+DKTRF DGLK+QR
Sbjct: 248 PWELKKTESIDVLDGLGSNIRVDTRGLEVMRILPRLNDEVNEEWINDKTRFACDGLKTQR 307
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPE--EIVGIAGRLSDAESMMALKDFLN 179
L P++R +G+F+ +W AL +A P+ E IAG+L++ ES++A+KD N
Sbjct: 308 LTIPLVR-REGKFEPASWDQALTEIAHAYQTLNPQGNEFKAIAGQLTEVESLVAMKDLAN 366
Query: 180 RMGSNNVWCEGTGAQS----NADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNAR 235
R+GS N+ + D+RS YI N+SI G+E AD LLVGT PR EAA++NAR
Sbjct: 367 RLGSENLALDMPSGHKPLAHGVDVRSNYIFNSSIVGIESADVILLVGTNPRHEAAVLNAR 426
Query: 236 IRKTVRANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVG 295
IRK ++ ++G +G D ++ +HLGT L + EG F + +AKNP+IIVG
Sbjct: 427 IRKQWLRSDLEIGVVGQTWDSTFEFEHLGTDHAALQKALEG--DFGKKLQSAKNPMIIVG 484
Query: 296 AGLFERKDKDAIFSTVEAI--AKKGNVIRPDWNGLNVLLLNAAQAAALDLGL-VPESSNS 352
+G+ + D +A + TV + N + +WNG NVL A++ A ++G VP + +
Sbjct: 485 SGVTDHGDANAFYETVGKFVDSNASNFLTEEWNGYNVLQRAASRVGAFEVGFTVPSAEIA 544
Query: 353 IESAKFVYLMGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTE 412
KFV+L+GAD+ + +P DAF+VYQGHHGD G A+++LP +A++EK GTY NTE
Sbjct: 545 QTKPKFVWLLGADEFNEADIPKDAFIVYQGHHGDRGAQIADIVLPGAAYTEKAGTYVNTE 604
Query: 413 GCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDERE 472
G Q T A G AR DWKI+RA+SE G+RLPYD + +R R+ ++P L D E
Sbjct: 605 GRVQMTRAATGLPGAARTDWKILRAVSEYLGVRLPYDDVAQLRDRMVEISPALSSYDIIE 664
Query: 473 PATLGPSLKPEIKSEMDLT-----PFGSAVENFYMTDSITRASKTMAQCSA 518
P +L K ++ + P +ENFY TD+I+R+S TMA+CSA
Sbjct: 665 PPSLQQLSKVQLVEQNQGATATNEPLKKVIENFYFTDAISRSSPTMARCSA 715
>sp|Q1RKD2|NUOG_RICBR NADH-quinone oxidoreductase subunit G OS=Rickettsia bellii (strain
RML369-C) GN=nuoG PE=3 SV=1
Length = 681
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/518 (43%), Positives = 321/518 (61%), Gaps = 12/518 (2%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C+RFA ++AG++++G + RG E+ +Y+E+ + SE+SGN+IDICPVGAL SKP+AFKAR
Sbjct: 152 CIRFANDIAGIEEMGAIHRGEHMEVTSYLEQTLDSEISGNMIDICPVGALNSKPYAFKAR 211
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WEL+ T +I V DA GSNIRIDSRG EVMR+LPR+NE+INEEW+SDK RF YDGLK QR
Sbjct: 212 KWELRHTASIGVHDAEGSNIRIDSRGDEVMRVLPRVNEEINEEWLSDKNRFSYDGLKYQR 271
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L+ P IR +G+ + +W +AL +A+ + KPE+I AG L+ E+M LK FL ++
Sbjct: 272 LDQPYIR-KNGKLVSASWDEALKAIADKIKSIKPEKITAFAGTLASVEAMFMLKTFLQKI 330
Query: 182 GSNNVWCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKTVR 241
G NN + + R Y+ NT+I+GLEKAD LL+G PR A ++N+RI VR
Sbjct: 331 GCNNYNVNQFDYKLDTTQRGNYLFNTTIAGLEKADLCLLIGANPRQIAPVLNSRIGGRVR 390
Query: 242 ANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLFER 301
A + KV IG + Y Q LG+ K L E+A H F + AK P+IIVG G++ R
Sbjct: 391 AGSLKVARIGEGHNQTYKIQDLGSDLKILEELALDEHKFAEELKAAKYPIIIVGDGVYGR 450
Query: 302 KDKDAIFSTVEAIAKKGNVIRPDWNGLNVLLLNAAQAAALDLGLVPESSNSIESAKFVYL 361
D AI S + I K N++R DW G N+L +A+ D+G S +E + YL
Sbjct: 451 NDGHAILSLIHKIVDKYNIMRDDWKGFNILHNHASMVGGFDIGF-DTSLGKLEDIELAYL 509
Query: 362 MGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEGCTQQTLPA 421
+GAD++ +KL + AF+VYQGHHGD G +A++ILP++A++E+ G Y N EG Q A
Sbjct: 510 LGADELPFDKLKS-AFIVYQGHHGDIGATKADIILPSAAYTEQSGIYVNLEGRPQIAEKA 568
Query: 422 VPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAP---NLLHVDEREPATLGP 478
V VG A++D II+ L++ + + IR+++ P N+ + + + A
Sbjct: 569 VSPVGKAKEDIAIIKELADCLKLDTLVSNLQEIRTKLAKEYPIFANIGKIIDNKFAKFSS 628
Query: 479 SLKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQC 516
K ++ P + N+YMTD I++ S TMA+C
Sbjct: 629 ------KDKLSKEPITAETINYYMTDVISKNSVTMARC 660
>sp|Q9ZCF6|NUOG_RICPR NADH-quinone oxidoreductase subunit G OS=Rickettsia prowazekii
(strain Madrid E) GN=nuoG PE=3 SV=1
Length = 675
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/515 (42%), Positives = 314/515 (60%), Gaps = 7/515 (1%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C+R A ++AG++++G + RG E+ +Y+E+ + SE+SGN+IDICPVGAL SKP+AFKAR
Sbjct: 152 CIRLANDIAGIEEIGAINRGEHMEVTSYLEQTLDSEISGNMIDICPVGALNSKPYAFKAR 211
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WELK T +I V DA GSNIRIDSR E+MRILPR+NE INEEW+SDK RFCYDGLK QR
Sbjct: 212 KWELKHTASIGVHDAEGSNIRIDSRADEIMRILPRVNEAINEEWLSDKNRFCYDGLKYQR 271
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L+ P IR +G+ V+W +A + + + KPE+I IAG + E+M LK L ++
Sbjct: 272 LDHPYIR-KNGKLVEVSWSEAFKTIMDKIKSVKPEKIAAIAGSIVSVEAMFMLKILLQKL 330
Query: 182 GSNNVWCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKTVR 241
GSNN + + R Y+ NT+I G+EKAD LL+G R A ++N+RI + VR
Sbjct: 331 GSNNYTVNQFNYKIDTSERGNYLFNTTIVGVEKADLCLLIGANTRQIAPILNSRIGRRVR 390
Query: 242 ANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLFER 301
KV IG + Y Q LG K + ++A G H + A AK P+IIVG G++ R
Sbjct: 391 IGALKVVRIGIGHNQTYKIQDLGNDIKIIEDLAIGTHEYTKAFKEAKYPMIIVGDGVYGR 450
Query: 302 KDKDAIFSTVEAIAKKGNVIRPDWNGLNVLLLNAAQAAALDLGLVPESSNSIESAKFVYL 361
D A+ S + + K N++R DW G N+L +A+ LD+G ++ E K YL
Sbjct: 451 DDGYAVLSLIHKVVDKYNMMRDDWQGFNILHNHASIVGGLDIGF--NTTIKFEGIKLAYL 508
Query: 362 MGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEGCTQQTLPA 421
+GAD + +KL + AF++YQGHHGD G A+VILPA+A++E+ G Y N EG Q A
Sbjct: 509 LGADAIPFDKLKS-AFIIYQGHHGDVGAMSADVILPAAAYTEQSGIYVNLEGRPQIAQKA 567
Query: 422 VPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPATLGPSLK 481
V TVG A++D +II+ ++ + + D + +R R+ ++D+ T+ K
Sbjct: 568 VSTVGGAKEDIEIIKEIAGYLKIDIGMDNLQEVRIRLAKEYNVFANIDK---ITVNKFTK 624
Query: 482 PEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQC 516
++ P + N+YMTD I++ S TMA+C
Sbjct: 625 FISIDKLSKDPIAARPINYYMTDVISKNSVTMAKC 659
>sp|Q92G92|NUOG_RICCN NADH-quinone oxidoreductase subunit G OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=nuoG PE=3 SV=2
Length = 671
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/515 (44%), Positives = 319/515 (61%), Gaps = 7/515 (1%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C+RFA+++AG++++G + RG E+ +Y+E+ + SE+SGN+IDICPVGAL SKP+AFKAR
Sbjct: 152 CIRFASDIAGIEEIGAIHRGEHIEVTSYLEQTLDSEISGNMIDICPVGALNSKPYAFKAR 211
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WELK T +I V DA GSNIRIDSRG EVMRILPR+NE+INEEW+SDK RF YDGLK QR
Sbjct: 212 KWELKHTASIGVHDAEGSNIRIDSRGDEVMRILPRVNEEINEEWLSDKNRFSYDGLKYQR 271
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L+ P IR +G+ +W +AL VA+ + KPE+IV IAG LS E+M LK L ++
Sbjct: 272 LDRPYIR-KNGKLVEASWSEALKTVADKIKSVKPEKIVAIAGSLSSVEAMFMLKTLLQKL 330
Query: 182 GSNNVWCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKTVR 241
GSNN + + R Y+ NT+I+G+EKAD LL+G PR A ++N+RI VR
Sbjct: 331 GSNNYSVNQFDYKLDTMQRGNYLFNTTIAGIEKADLCLLIGANPRQIAPVLNSRIGMRVR 390
Query: 242 ANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLFER 301
A++ KV IG + Y Q LG+ K + E+A G H F A+ AK +IIVG G++ R
Sbjct: 391 ADSLKVARIGGGHNQTYKIQDLGSDIKIIEELAIGTHEFTKALKAAKYLMIIVGDGVYAR 450
Query: 302 KDKDAIFSTVEAIAKKGNVIRPDWNGLNVLLLNAAQAAALDLGLVPESSNSIESAKFVYL 361
D AI S + I + N++R DW G N+L +A+ LD+G + +E + YL
Sbjct: 451 DDGYAILSLIHKIVTEYNIMRDDWKGFNILHNHASIVGGLDIGF--NTPIKLEELELAYL 508
Query: 362 MGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEGCTQQTLPA 421
+G D + +KL + F++YQGHHGD G A+VILPA+A++E+ G Y N EG Q A
Sbjct: 509 LGTDAIPFDKLKS-TFIIYQGHHGDAGASSADVILPAAAYTEQSGIYVNLEGRPQIAEKA 567
Query: 422 VPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPATLGPSLK 481
V VG A++D +II+ L+ + + D + +R R+ +D K
Sbjct: 568 VSPVGVAKEDIEIIKELAGYLKIDIGMDNLQEVRVRLAKEYKVFASIDRIIENKFS---K 624
Query: 482 PEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQC 516
K ++ P + N+YMTD I++ S TMA+C
Sbjct: 625 FSSKDKLSKEPITAEPINYYMTDVISKNSVTMAKC 659
>sp|Q4UK22|NUOG_RICFE NADH-quinone oxidoreductase subunit G OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=nuoG PE=3 SV=1
Length = 671
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/515 (43%), Positives = 321/515 (62%), Gaps = 7/515 (1%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C+RFA ++AG++++G + RG E+ +Y+E+ + SE+SGN+IDICPVGAL SKP+AFKAR
Sbjct: 152 CIRFANDIAGIEEMGAIHRGEHMEVTSYLEQTLDSEMSGNMIDICPVGALNSKPYAFKAR 211
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WELK T +I V DA GSNIRIDSRG EVMRILPR+NE+INEEW+SDK RF YDGLK QR
Sbjct: 212 KWELKHTASIGVHDAEGSNIRIDSRGDEVMRILPRVNEEINEEWLSDKNRFSYDGLKYQR 271
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L+ P IR +G+ +W +AL +A+ + KPE+I IAG L E+M LK L ++
Sbjct: 272 LDLPYIR-KNGKLVEASWSEALKTIADKIKSVKPEKIAAIAGSLVSVEAMFMLKTLLQKL 330
Query: 182 GSNNVWCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKTVR 241
GSNN + + R Y+ NT+I+G+EKAD LL+G R A ++N+RI + VR
Sbjct: 331 GSNNYSVNQFDYKFDTTQRGNYLFNTTIAGVEKADLCLLIGANLRQIAPVLNSRIGQRVR 390
Query: 242 ANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLFER 301
A + KV IG + Y Q LG+ K + E+A G H F A+ AK P+IIVG G++ R
Sbjct: 391 AGSLKVARIGEGHNQTYRIQDLGSDIKIIEELAIGTHEFTKALKAAKYPMIIVGDGVYAR 450
Query: 302 KDKDAIFSTVEAIAKKGNVIRPDWNGLNVLLLNAAQAAALDLGLVPESSNSIESAKFVYL 361
D AI S + I + N++R D+ G N+L +A+ LD+G + +E + YL
Sbjct: 451 DDGYAILSLIHKIVAEYNIMRDDFQGFNMLHNHASIVGGLDIGF--NTPIKLEELELTYL 508
Query: 362 MGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEGCTQQTLPA 421
+GAD++ +KL + AF++YQGHHGD G A+VILPA+A++E+ G Y N EG Q A
Sbjct: 509 LGADELPFDKLKS-AFIIYQGHHGDSGAANADVILPAAAYTEQSGIYVNLEGRPQIAEKA 567
Query: 422 VPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPATLGPSLK 481
V VG A++D +II+ L+ + + D + +R R+ ++D+ + K
Sbjct: 568 VAPVGVAKEDIEIIKELAGSLKIDIGMDNLQEVRVRLAKEYKIFANIDKIVESKFA---K 624
Query: 482 PEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQC 516
K ++ P N+YMTD I++ S TMA+C
Sbjct: 625 FSFKDKLSKEPITMGPINYYMTDVISKNSVTMAKC 659
>sp|Q68VV2|NUOG_RICTY NADH-quinone oxidoreductase subunit G OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=nuoG PE=3 SV=1
Length = 675
Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/515 (41%), Positives = 311/515 (60%), Gaps = 7/515 (1%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C+RFA ++AG++++G + RG E+ +Y+E+ + SE+SGN+IDICPVGAL SKP+AFKAR
Sbjct: 152 CIRFANDIAGIEEIGAINRGEHMEVTSYLEQTLDSEISGNMIDICPVGALNSKPYAFKAR 211
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WELK T +I V DA GSNIRIDSR E+MRILP +NE INE WISDK RFCYDGLK QR
Sbjct: 212 KWELKHTASIGVHDAEGSNIRIDSRADEIMRILPSVNEAINEAWISDKNRFCYDGLKYQR 271
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L+ P IR +G+ V+W +AL + + + KPE+I IAG + E+M LK L ++
Sbjct: 272 LDHPYIR-KNGKLVEVSWSEALKTIMDKIKSVKPEKIAAIAGSIVSVEAMFMLKILLQKL 330
Query: 182 GSNNVWCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKTVR 241
GSNN + + R Y+ NT+I G+EKAD LL+G R A ++N+RI + VR
Sbjct: 331 GSNNYTVNQFNYKIDTSERGNYLFNTTIVGVEKADLCLLIGANIRQIAPILNSRIGRRVR 390
Query: 242 ANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLFER 301
KV IG + Y LG K + ++A G H + A AK P+IIVG G++ R
Sbjct: 391 IGALKVVRIGIGHNQTYKIHDLGNDIKIIEDLAVGTHEYTKAFKEAKYPMIIVGDGVYGR 450
Query: 302 KDKDAIFSTVEAIAKKGNVIRPDWNGLNVLLLNAAQAAALDLGLVPESSNSIESAKFVYL 361
D A+ S + + K N++R DW G N+L +A+ LD+G ++ E K YL
Sbjct: 451 DDGYALLSLIHKVVDKYNMMRDDWQGFNILHNHASIVGGLDIGF--NTAIKFEGVKLAYL 508
Query: 362 MGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEGCTQQTLPA 421
+GAD + +KL + AF++YQGHHGD G A+VILP++A++E+ G Y N EG Q A
Sbjct: 509 LGADAIPFDKLKS-AFIIYQGHHGDVGAMSADVILPSAAYTEQSGIYVNLEGRPQIAQKA 567
Query: 422 VPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPATLGPSLK 481
V VG A++D +II+ ++ + + D + +R R+ ++D+ +
Sbjct: 568 VSPVGRAKEDIEIIKEIAGYLKIDIGMDNLQEVRIRLAKEYNIFANIDKITANRFTQFIS 627
Query: 482 PEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQC 516
+ ++ P + N+YMTD I++ S TMA+C
Sbjct: 628 ID---KLSQEPIAARPINYYMTDVISKNSVTMAKC 659
>sp|P29915|NQO3_PARDE NADH-quinone oxidoreductase chain 3 OS=Paracoccus denitrificans
GN=nqo3 PE=1 SV=4
Length = 673
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/518 (40%), Positives = 314/518 (60%), Gaps = 25/518 (4%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
CVRF TEVAG+ +G GRG EI +Y+ + + S + GN+ID+CPVGAL SKP+AF AR
Sbjct: 164 CVRFTTEVAGITQMGQTGRGEDSEITSYLNQTLESNMQGNIIDLCPVGALVSKPYAFTAR 223
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WEL TE+IDV DA+GS+IRID++G EVMRILPR ++ +NEEWISDKTRF +DGL+ QR
Sbjct: 224 PWELTKTESIDVMDALGSSIRIDTKGREVMRILPRNHDGVNEEWISDKTRFVWDGLRRQR 283
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L+ P IR +GR + +W +AL A M K ++I G+ G L AE+ +LK + +
Sbjct: 284 LDRPYIR-ENGRLRPASWPEALEAAARAM---KGKKIAGLIGDLVPAEAAFSLKQLVEGL 339
Query: 182 GSNNVWCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKTVR 241
G V C GA+ A RS Y+ I ++ A+ L+GT PR EA ++NARIRK
Sbjct: 340 G-GKVECRVDGARLPAGNRSAYVGTARIEDIDDAEMIQLIGTNPRDEAPVLNARIRKAW- 397
Query: 242 ANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNPVIIVGAGLFER 301
+ AKVG +G DL YD+ H+GT + LE R S + A+ ++IVG G R
Sbjct: 398 SKGAKVGLVGEPVDLTYDYAHVGTD-RAALESLSSRE--ISDETKARPSIVIVGQGAIAR 454
Query: 302 KDKDAIFSTVEAIAKKGNVIRPDWNGLNVLLLNAAQAAALDLGLVPESS--NSIESAKFV 359
+D +A+ + +A+ N +GL +L A + A+D+G V E +I+ A+ V
Sbjct: 455 RDGEAVLAHAMKLAENSN------SGLLILHTAAGRVGAMDVGAVTEGGLLAAIDGAEVV 508
Query: 360 YLMGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEGCTQQTL 419
Y +GAD+VD+++ P FV+YQG HGD G +R ++ILP + ++E+ G + NTEG Q +
Sbjct: 509 YNLGADEVDIDQGP---FVIYQGSHGDRGAHR-DIILPGACYTEESGLFVNTEGRPQLAM 564
Query: 420 PAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVDEREPATLGPS 479
A G+ +++W I+RALS G P+D++ G+R ++ P+L +D+ P
Sbjct: 565 RANFAPGEGKENWAILRALSAELGATQPWDSLAGLRRKLVEAVPHLAQIDQ-VPQN---E 620
Query: 480 LKPEIKSEMDLTPFGSAVENFYMTDSITRASKTMAQCS 517
+P + ++ F A+ +FY+T+ I R+S M + S
Sbjct: 621 WQPLGRFDLGQASFRYAIRDFYLTNPIARSSPLMGELS 658
>sp|Q37373|NDUS1_ACACA NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Acanthamoeba
castellanii GN=NAD11 PE=3 SV=1
Length = 675
Score = 332 bits (850), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 194/540 (35%), Positives = 283/540 (52%), Gaps = 55/540 (10%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
CVRF+ EVAGV LG+ GRGS EIG Y+E LM SELSGNVID+CPVGALTSKPFAF +R
Sbjct: 154 CVRFSNEVAGVNILGVTGRGSKMEIGFYIENLMRSELSGNVIDLCPVGALTSKPFAFTSR 213
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
WELK +IDV D++ SNIR+D RG ++MRILPR+N ++NE+WI+DK RF YD + QR
Sbjct: 214 PWELKSYNSIDVLDSLHSNIRVDIRGTKIMRILPRVNSELNEDWITDKIRFSYDSFRRQR 273
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVML------QAKPEEIVGIAGRLSDAESMMALK 175
L DPM++ G F + W+ A+ + + + + G G D E++ K
Sbjct: 274 LYDPMVK-ISGSFLKIGWKKAMLFIKKFFCNFLGFNHSSFIPLRGYIGDYLDLETIYTFK 332
Query: 176 DFLNRMGSNNVWCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNAR 235
FL GSN + S DL + Y NT ++ L++ D +L+ RVE +VN+R
Sbjct: 333 KFLLLNGSNFF----LPSSSYNDLTALYSFNTPLTRLDEGDFCILLDVNLRVELPIVNSR 388
Query: 236 IRKTVRANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISN--AKNPVII 293
I++ V V +G ++ NY +H+ KTLL + EG H + IS + P+ +
Sbjct: 389 IKQLVSKKMLPVFVLGFYSNFNYFVKHISNSSKTLLHVLEGSHWLSAKISKKFSSKPIFL 448
Query: 294 VGAGLFERKDKDAIF--STVEAIAKKGNVIRPDWNGLNVLLLNAAQAAALDLGLVPESSN 351
+G D ++ S + + NVI +WNGLN++ +++ + + L S
Sbjct: 449 IG-------DSSSLLKGSLIVPLFNFTNVICDNWNGLNIISNDSSYLSTKEFNLSSSHSQ 501
Query: 352 SIESAKFV--YLMGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYE 409
+ F +++ D L + + AF +YQGHHGD +N+I P+++F EK Y
Sbjct: 502 NSHLLNFPINFVLNYDKAVL--VDSSAFQIYQGHHGDTNAINSNLIFPSTSFIEKNSFYS 559
Query: 410 NTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHVD 469
N+ Q+T + + G++RDDWKI+ AL D G ++R + +
Sbjct: 560 NSLAIVQKTKKILFSPGNSRDDWKILNAL---------IDNFGFSYFKVRNSFDLVSFLS 610
Query: 470 EREPATLGPSLKPEIKSEMDLTPFG-------------SAVENFYMTDSITRASKTMAQC 516
E P L K FG S N+Y+ DSITR SK M+ C
Sbjct: 611 ESTPFIL-------YKRSFSFKCFGFYEQLVYHFFNYFSVNNNYYIYDSITRNSKIMSLC 663
>sp|Q34312|NDUS1_DICDI NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Dictyostelium
discoideum GN=nad11 PE=3 SV=1
Length = 688
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 170/531 (32%), Positives = 277/531 (52%), Gaps = 44/531 (8%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMT-SELSGNVIDICPVGALTSKPFAFKA 60
CVRF TE+AGV +LG+LGRG EIGTY + +M SELSGN+ID+CPVGALTS +A+K
Sbjct: 159 CVRFLTEIAGVNELGVLGRGYNMEIGTYKKNVMIESELSGNIIDLCPVGALTSAVYAYKG 218
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLK-- 118
R WELK + ID+ D + + I +G E+ RILPR+N+ INEEWI+DK RF Y+ K
Sbjct: 219 RPWELKNIKGIDIFDTLLTPINYQVKGGEIFRILPRINDRINEEWITDKVRFHYESYKII 278
Query: 119 -SQRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDF 177
R P + +F + W+ AL +V +V+L K ++ I G ++ ++ K+
Sbjct: 279 EKIRKETPSYKIQANKFIELTWKTALKMVFKVLLN-KKNKVDLIIGSKINSTNLRIYKEL 337
Query: 178 LNRMGSNNVWCEG--TGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNAR 235
+NR+GS N E + N DLR YI + + ++K D LL G RVE+ ++N +
Sbjct: 338 MNRLGSKNYITENGLMFKKFNYDLRENYINSNDLYNVDKNDLVLLCGINLRVESPLLNIK 397
Query: 236 IRKTVRANN-----AKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNP 290
+R ++ K+G IG D ++ +++G ++L++ EGR P+ I +K P
Sbjct: 398 LRNVNFGDDEIESVKKIGIIGNKFDWKHESEYIGATLNSMLKLFEGRLPYCQQIKKSKAP 457
Query: 291 VIIVGAGLFERKDKDAIFSTVEAIAKKGNVIRPDWNGLNVLLLN--AAQAAALDLGLVPE 348
+IIVG L R + AI K ++P+ N+L++ A AL+ GL E
Sbjct: 458 LIIVGPSLLTR--ISLTLQEMRAIFMKACNLKPE----NILIITQGANFGMALEEGLFKE 511
Query: 349 SSNSIESAKFVYLMGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTY 408
+ +Y + +++V + N +V+YQG D + ++ LP+ + +
Sbjct: 512 KFSI--GGNVLYSIDSNEVQVTNKIN--YVIYQGIINDKFENKIDLYLPSKHY------F 561
Query: 409 ENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAPNLLHV 468
E+ EG + + T G + I LS G ++ +++ G ++ + +
Sbjct: 562 EDFEGDREVYM---NTFGQRSE----IEKLSISKGNKIKENSMIGY-IQLMYLNNKEMTR 613
Query: 469 DEREPATLGPS---LKPEIKSEMDLTPF---GSAVENFYMTDSITRASKTM 513
E+E + S +K E K ++ + + + +EN+YMTD R SK +
Sbjct: 614 KEKEQKDIKLSYREMKKEEKRKIKVNKYLTINNIIENYYMTDINIRLSKNL 664
>sp|Q2LCP5|NDUS1_DICCI NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Dictyostelium
citrinum GN=nad11 PE=3 SV=2
Length = 688
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/533 (31%), Positives = 276/533 (51%), Gaps = 48/533 (9%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEK-LMTSELSGNVIDICPVGALTSKPFAFKA 60
CVRF TE+AGV +LG+LGRG EIGTY + ++ SELSGN+ID+CPVGALTS +A+K
Sbjct: 159 CVRFLTEIAGVNELGVLGRGYNMEIGTYKKNVIIESELSGNIIDLCPVGALTSAVYAYKG 218
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLK-- 118
R WELK + ID+ D V + I +G E+ RILPR+N+ +NEEWI+DK RF Y+ K
Sbjct: 219 RPWELKNIKGIDIFDTVLTPINYQVKGGEIFRILPRINDRLNEEWITDKVRFHYESYKII 278
Query: 119 -SQRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDF 177
R + P + +F ++W+ AL +V +V+L K ++ I G ++ ++ K+
Sbjct: 279 EKMRKDTPSYKIQANKFIELSWKTALKMVFKVLLN-KKNKVDLIIGSKINSTNLRIYKEL 337
Query: 178 LNRMGSNNVWCEG--TGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNAR 235
+NR+GS N E + N D R YI + + +++ D LL G RVE+ ++N +
Sbjct: 338 MNRLGSKNYITENGLLFKKFNYDFRENYINSNDLYNVDQNDLVLLCGINLRVESPLLNIK 397
Query: 236 IRKTVRANN-----AKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSAISNAKNP 290
+R ++ K+G IG D + ++LG+ ++L++ EGR P+ I +K P
Sbjct: 398 LRNINFGDDEIETRKKIGIIGNKFDWKQESEYLGSTVNSMLKVFEGRFPYCQQIKKSKAP 457
Query: 291 VIIVGAGLFERKDKDAI-FSTVEAIAKKGNVIRPDWNGLNVLLLN--AAQAAALDLGLVP 347
+I+VG+ L R AI + A + + I+P+ NVLL+ A AL+ G+
Sbjct: 458 LILVGSSLLSR---IAISLQEIRAAFEIASNIKPE----NVLLITQGANFGMALEEGIFK 510
Query: 348 ESSNSIESAKFVYLMGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSE---- 403
E N + +Y + +++ + K N +++YQG D + ++ LP+ + E
Sbjct: 511 E--NFSKGGNVLYSIDSNEYKVSKTIN--YIIYQGILNDTFENKIDLYLPSKHYFEDFES 566
Query: 404 KEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTVAP 463
Y NT G + + G+ I+ S + ++L Y +
Sbjct: 567 DREIYVNTFGQRSEIEKLRISKGNK------IKENSMIGYIQLMY---------LNKKEM 611
Query: 464 NLLHVDEREPATLGPSLKPEIKSEMDLTP---FGSAVENFYMTDSITRASKTM 513
N +++E +K + K ++ + + ++N+YMTD +R SK +
Sbjct: 612 NRKEKEQKEIKITYRGIKQKEKRQVKINKNLTINNIIDNYYMTDINSRLSKNL 664
>sp|Q56223|NQO3_THET8 NADH-quinone oxidoreductase subunit 3 OS=Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579) GN=nqo3 PE=1 SV=2
Length = 783
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 205/488 (42%), Gaps = 61/488 (12%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
CVR+ EV G + L + RG IGT ++ + S SGN+ DICPVGAL F+AR
Sbjct: 187 CVRYFEEVPGDEVLDFIERGVHTFIGT-MDFGLPSGFSGNITDICPVGALLDLTARFRAR 245
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQR 121
NWE++ T T VG I D+R E++RI R ++NE WI D RF ++ R
Sbjct: 246 NWEMEETPTTCALCPVGCGITADTRSGELLRIRAREVPEVNEIWICDAGRFGHEWADQNR 305
Query: 122 LNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRM 181
L P++R +GR W +A + E + +A+ EE+ + E + + +
Sbjct: 306 LKTPLVR-KEGRLVEATWEEAFLALKEGLKEARGEEVGLYLAHDATLEEGLLASELAKAL 364
Query: 182 GSNNVWCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIRKTVR 241
+ ++ +G A + S+ L +AD F LV P EA +++ R+ + VR
Sbjct: 365 KTPHLDFQGRTAAP-----ASLFPPASLEDLLQAD-FALVLGDPTEEAPILHLRLSEFVR 418
Query: 242 --ANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFS----------------- 282
+ + P DL + K L A R P
Sbjct: 419 DLKPPHRYNHGTPFADLQIKERMPRRTDKMAL-FAPYRAPLMKWAAIHEVHRPGEEREIL 477
Query: 283 ------------------AISNAKNPVIIVGAGLFERKDKDAIFSTVEAIAKKGNVIRPD 324
A AKNPV+I+GAG+ + + +A + + +
Sbjct: 478 LALLGDKEGSEMVAKAKEAWEKAKNPVLILGAGVLQ-----------DTVAAERARLLAE 526
Query: 325 WNGLNVLLLN-AAQAAALD-LGLVPESSN-SIESAKFVYLMGADDVDLEKLPNDAFVVYQ 381
G VL + AA A L+ +G++P + S + +Y E L FVV
Sbjct: 527 RKGAKVLAMTPAANARGLEAMGVLPGAKGASWDEPGALYAYYGFVPPEEALKGKRFVVMH 586
Query: 382 GHHGDHGVYR-ANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSE 440
H R A+V+LPA F EK G N EG PA G+A +++ L+E
Sbjct: 587 LSHLHPLAERYAHVVLPAPTFYEKRGHLVNLEGRVLPLSPAPIENGEAEGALQVLALLAE 646
Query: 441 VAGMRLPY 448
G+R P+
Sbjct: 647 ALGVRPPF 654
>sp|Q9XAR0|NUOG_STRCO NADH-quinone oxidoreductase subunit G OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=nuoG PE=3 SV=1
Length = 843
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 131/266 (49%), Gaps = 20/266 (7%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C RF+ +VAG + ++ RG+ +++GT S SGN I ICPVGALTS + F++R
Sbjct: 175 CTRFSNQVAGDPMIELIERGALQQVGTGEGDPFESYFSGNTIQICPVGALTSAAYRFRSR 234
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYD-GLKSQ 120
++L + ++ + G R D R +VMR L ++NEEWI DK RF + +
Sbjct: 235 PFDLISSPSVCEHCSGGCATRTDHRRGKVMRRLAANEPEVNEEWICDKGRFGFRYAQQRD 294
Query: 121 RLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALK----- 175
RL P++R A+G + +W +AL + A+ +L ++ V GRL+ ++ K
Sbjct: 295 RLTTPLVRNAEGELEPASWPEALQIAAQGLLASRGRTGVLTGGRLTVEDAYAYSKFARVA 354
Query: 176 ------DFLNRMGS--------NNVWCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLV 221
DF R+ S +V G ++ SG + + LEKA LLV
Sbjct: 355 LDTNDIDFRARVHSAEEADFLAAHVAGRGRDLGGSSRTESGGGAGVTYTSLEKAPAVLLV 414
Query: 222 GTQPRVEAAMVNARIRKTVRANNAKV 247
G + EA V R+RK R + KV
Sbjct: 415 GFEAEEEAPGVFLRLRKAWRKHGQKV 440
>sp|P95175|NUOG_MYCTU NADH-quinone oxidoreductase subunit G OS=Mycobacterium tuberculosis
GN=nuoG PE=3 SV=2
Length = 806
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 132/260 (50%), Gaps = 9/260 (3%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C RF+ ++AG + M RG+ +++G Y ++ S SGN + ICPVGALT + F+AR
Sbjct: 170 CTRFSDQIAGDPFIDMQERGALQQVGIYADEPFESYFSGNTVQICPVGALTGTAYRFRAR 229
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYD-GLKSQ 120
++L + ++ A G R D R +V+R L + ++NEEW DK R+ + +
Sbjct: 230 PFDLVSSPSVCEHCASGCAQRTDHRRGKVLRRLAGDDPEVNEEWNCDKGRWAFTYATQPD 289
Query: 121 RLNDPMIR-GAD--GRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDF 177
+ P+IR G D G +W A+AV A+ + A+ V + GR++ ++ K
Sbjct: 290 VITTPLIRDGGDPKGALVPTSWSHAMAVAAQGLAAARGRTGVLVGGRVTWEDAYAYAKFA 349
Query: 178 LNRMGSNNV-WCEGTGAQSNADLRSGYI----MNTSISGLEKADCFLLVGTQPRVEAAMV 232
+G+N++ + + AD + I M S + LE A LLVG +P E+ +V
Sbjct: 350 RITLGTNDIDFRARPHSAEEADFLAARIAGRHMAVSYADLESAPVVLLVGFEPEDESPIV 409
Query: 233 NARIRKTVRANNAKVGYIGP 252
R+RK R + V I P
Sbjct: 410 FLRLRKAARRHRVPVYTIAP 429
>sp|P59962|NUOG_MYCBO NADH-quinone oxidoreductase subunit G OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=nuoG PE=3 SV=1
Length = 806
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 132/260 (50%), Gaps = 9/260 (3%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
C RF+ ++AG + M RG+ +++G Y ++ S SGN + ICPVGALT + F+AR
Sbjct: 170 CTRFSDQIAGDPFIDMQERGALQQVGIYADEPFESYFSGNTVQICPVGALTGTAYRFRAR 229
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYD-GLKSQ 120
++L + ++ A G R D R +V+R L + ++NEEW DK R+ + +
Sbjct: 230 PFDLVSSPSVCEHCASGCAQRTDHRRGKVLRRLAGDDPEVNEEWNCDKGRWAFTYATQPD 289
Query: 121 RLNDPMIR-GAD--GRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDF 177
+ P+IR G D G +W A+AV A+ + A+ V + GR++ ++ K
Sbjct: 290 VITTPLIRDGGDPKGALVPTSWSHAMAVAAQGLAAARGRTGVLVGGRVTWEDAYAYAKFA 349
Query: 178 LNRMGSNNV-WCEGTGAQSNADLRSGYI----MNTSISGLEKADCFLLVGTQPRVEAAMV 232
+G+N++ + + AD + I M S + LE A LLVG +P E+ +V
Sbjct: 350 RITLGTNDIDFRARPHSAEEADFLAARIAGRHMAVSYADLESAPVVLLVGFEPEDESPIV 409
Query: 233 NARIRKTVRANNAKVGYIGP 252
R+RK R + V I P
Sbjct: 410 FLRLRKAARRHRVPVYTIAP 429
>sp|Q8EI34|NUOG_SHEON NADH-quinone oxidoreductase subunit G OS=Shewanella oneidensis
(strain MR-1) GN=nuoG PE=3 SV=1
Length = 909
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 203/517 (39%), Gaps = 94/517 (18%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKA- 60
CVR+ + AG +DLG+ G G + + SE SGN++++CP G T K + +
Sbjct: 157 CVRYYKDYAGGEDLGVYGAHDNVYFGRVEDGTLESEFSGNLVEVCPTGVFTDKTHSERYN 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLK-S 119
R W+++ +I +VG NI R E+ RI R + +N ++ D+ RF Y +
Sbjct: 217 RKWDMQFAPSICQQCSVGCNISPGERYGELRRIENRFHGSVNHYFLCDRGRFGYGYVNLP 276
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLN 179
R P ++ + + A+ AL A+ + AK ++GI + ES AL++ +
Sbjct: 277 DRPRQPQLKNGNEQL-AITVDGALNRAADALRNAK--GVIGIGSPRASLESNFALRELV- 332
Query: 180 RMGSNNVWCEGTGAQSNAD------LRSGYIMNTSISGLEKADCFLLVGTQPRVEAA--- 230
G+NN + A+ L+ G + S+ +E+AD L++G + AA
Sbjct: 333 --GANNFYVGVEQAEWQCQQQMLHILQHGGVPTPSLRDMEEADAILVLGEDVTMSAARIA 390
Query: 231 -----MVNARIRKTVRANNAKVGYIGPATDLNY--------------------------- 258
V + R+ R + + L
Sbjct: 391 LSLRQAVKGKARELARKMKVDLWQVAAVQTLGQNQRYPLLITSLDTTRLDDVVEDKLHAP 450
Query: 259 --DHQHLGTGPKTLLEIAEGRHPFFSA------------ISNAKNPVIIVGAGLFERKDK 304
D LG LL+ A A + NAK P+II G+
Sbjct: 451 YADQARLGFAIANLLDPAAPAVTDLGAEQQAQAARWAELLGNAKKPLIIAGSSARSMALI 510
Query: 305 DAIFSTVEAIAKKGNVIRPDWNGLNVLLLNAAQAAALDLGLVPESSNSIESAKFVYLMGA 364
+A + A+ +G + L +A +L L ++ +S +E+A +
Sbjct: 511 EAASNIARALKGRGLEAS--------IALVGQEANSLGLAMLASTSQPLEAA-LERIEAE 561
Query: 365 DDVDLEKLPNDAF-----------------VVYQGHHGDHGVYRANVILPASAFSEKEGT 407
+ + L + ND + ++ H +A+++LPA++F+E +GT
Sbjct: 562 EGLALVTVENDLYRRAARNRVDAALARLQHLLVIDHQATSTAQKADLVLPAASFAETDGT 621
Query: 408 YENTEGCTQQTLPA-VPTVGDA----RDDWKIIRALS 439
N EG Q+ P +A R+ W+ + AL
Sbjct: 622 LVNMEGRAQRFFQVYAPAFYNADIQVREGWRWLAALQ 658
>sp|P56914|NUOG2_RHIME NADH-quinone oxidoreductase subunit G 2 OS=Rhizobium meliloti
(strain 1021) GN=nuoG2 PE=3 SV=2
Length = 853
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 6/251 (2%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKAR 61
CVR EV G LG + +G + + L + + GN +++CPVGAL S P+ +KAR
Sbjct: 154 CVRMCEEVVGAVALGTVEKGMDTAVTGFEGSLASCDQCGNCVEVCPVGALMSFPYRYKAR 213
Query: 62 NWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQ- 120
W+L T+TI G + + +R E MR+ +N E + + RF D ++S+
Sbjct: 214 PWDLAETDTICPHCGTGCQLTVGARKGEFMRVRSDWEHGVNRETLCVRGRFGLDFIESRD 273
Query: 121 RLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVG-IAGRLSDAESMMALKDFLN 179
R+ PMIR DG V+W +A + + + A+ + G I+ RL + K
Sbjct: 274 RIKRPMIR-RDGTLTPVSWEEAGDFLRQRLGVAEGKAAGGLISPRLPNEVLYQFQKLMRT 332
Query: 180 RMGSNNVWCEGTGAQSNADLRSGYIMNTSISGLEKA---DCFLLVGTQPRVEAAMVNARI 236
+ +NNV C + L S LE+ DC L++G E + +
Sbjct: 333 VLRTNNVDCSSRWSAPLDILVPIVASFYSRDPLEQVIGKDCVLIIGGNVTEENPVTEYLL 392
Query: 237 RKTVRANNAKV 247
R R + ++
Sbjct: 393 RDAARRRHTRL 403
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 392 ANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKI---IRALSE 440
A+V+LPA+ + E+ GT+ N EG TQ DAR + I I AL E
Sbjct: 627 ADVVLPAAGYGEESGTFTNNEGRTQALRKFREPAFDARSNLAIFGFIAALRE 678
>sp|Q89AU1|NUOG_BUCBP NADH-quinone oxidoreductase subunit G OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=nuoG PE=3 SV=1
Length = 907
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 121/249 (48%), Gaps = 15/249 (6%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFK-A 60
CVR+ + +G DLG+ G + G Y + + SE SGN++++CP G T K ++ K +
Sbjct: 157 CVRYYKDYSGGTDLGVFGISNNVYFGRYNDGCLESEFSGNLVEVCPTGVFTDKTYSKKYS 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLK-S 119
R W+++ +I VG NI + + ++ RI R + IN ++ D RF YD
Sbjct: 217 RKWDMQYAPSICQHCCVGCNISVGEKYGKISRIENRYHNAINHYFLCDLGRFSYDYSNVD 276
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQ-AKPEEIVGIAGRLSDAESMMALKDFL 178
+RL + R + + K +N D + ++ ++ K +I+GI + ES +L+
Sbjct: 277 ERLTYSIYR-SQNKTKIIN--DVNKTIDKLAMKFKKSSKIIGIGSCRASVESNFSLQKL- 332
Query: 179 NRMGSNNVWCEGTGAQSNA------DLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMV 232
+GS N + + + + L+ I ++ +EK+D L+G + ++
Sbjct: 333 --VGSENFYLGISQKEYDCLMLIKDILKDNQIHVPTLREIEKSDVIFLLGEDVTKTSPLI 390
Query: 233 NARIRKTVR 241
IR++++
Sbjct: 391 ALSIRQSIK 399
>sp|Q7UC56|NUOG_SHIFL NADH-quinone oxidoreductase subunit G OS=Shigella flexneri GN=nuoG
PE=3 SV=3
Length = 908
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 14/248 (5%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKA- 60
CVR+ + A DLG+ G G + + SE SGN+++ICP G T K + +
Sbjct: 157 CVRYYKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYN 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLK-S 119
R W+++ +I ++G NI R E+ RI R N +N ++ D+ RF Y +
Sbjct: 217 RKWDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK 276
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLN 179
R P+ R D F +N A+ A+++ Q+K +++GI + ES AL++ +
Sbjct: 277 DRPRQPVQRRGDD-FITLNAEQAMQGAADILRQSK--KVIGIGSPRASVESNFALRELV- 332
Query: 180 RMGSNNVWCE-GTGAQSNAD-----LRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVN 233
G N + G Q LR G I ++ +E D L++G A V
Sbjct: 333 --GEENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVA 390
Query: 234 ARIRKTVR 241
+R+ V+
Sbjct: 391 LAVRQAVK 398
>sp|Q8XCX2|NUOG_ECO57 NADH-quinone oxidoreductase subunit G OS=Escherichia coli O157:H7
GN=nuoG PE=3 SV=3
Length = 908
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 14/248 (5%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKA- 60
CVR+ + A DLG+ G G + + SE SGN+++ICP G T K + +
Sbjct: 157 CVRYYKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYN 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLK-S 119
R W+++ +I ++G NI R E+ RI R N +N ++ D+ RF Y +
Sbjct: 217 RKWDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK 276
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLN 179
R P+ R D F +N A+ A+++ Q+K +++GI + ES AL++ +
Sbjct: 277 DRPRQPVQRRGDD-FITLNAEQAMQGAADILRQSK--KVIGIGSPRASVESNFALRELV- 332
Query: 180 RMGSNNVWCE-GTGAQSNAD-----LRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVN 233
G N + G Q LR G I ++ +E D L++G A V
Sbjct: 333 --GEENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVA 390
Query: 234 ARIRKTVR 241
+R+ V+
Sbjct: 391 LAVRQAVK 398
>sp|Q8FFJ9|NUOG_ECOL6 NADH-quinone oxidoreductase subunit G OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=nuoG PE=3 SV=3
Length = 908
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 14/248 (5%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKA- 60
CVR+ + A DLG+ G G + + SE SGN+++ICP G T K + +
Sbjct: 157 CVRYYKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYN 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLK-S 119
R W+++ +I ++G NI R E+ RI R N +N ++ D+ RF Y +
Sbjct: 217 RKWDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK 276
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLN 179
R P+ R D F +N A+ A+++ Q+K +++GI + ES AL++ +
Sbjct: 277 DRPRQPVQRRGDD-FITLNAEQAMQGAADILRQSK--KVIGIGSPRASVESNFALRELV- 332
Query: 180 RMGSNNVWCE-GTGAQSNAD-----LRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVN 233
G N + G Q LR G I ++ +E D L++G A V
Sbjct: 333 --GEENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVA 390
Query: 234 ARIRKTVR 241
+R+ V+
Sbjct: 391 LAVRQAVK 398
>sp|P0A1Y4|NUOG_SALTY NADH-quinone oxidoreductase subunit G OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=nuoG PE=3 SV=2
Length = 908
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKA- 60
CVR+ + A DLG+ G G + + SE SGN+++ICP G T K + +
Sbjct: 157 CVRYYKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYN 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLK-S 119
R W+++ +I ++G NI R E+ RI R N +N ++ D+ RF Y +
Sbjct: 217 RKWDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK 276
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLN 179
R P+ R D F +N A+ A+++ Q+K +++GI + ES AL++ +
Sbjct: 277 DRPRQPVQRRGDD-FITLNAEQAMQGAADILRQSK--KVIGIGSPRASIESNFALRELV- 332
Query: 180 RMGSNNVWCE-GTGAQSNAD-----LRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVN 233
G+ N + G Q LR G I ++ +E D L++G A V
Sbjct: 333 --GAENFYTGIARGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVA 390
Query: 234 ARIRKTVR 241
+R+ V+
Sbjct: 391 LAVRQAVK 398
>sp|P0A1Y5|NUOG_SALTI NADH-quinone oxidoreductase subunit G OS=Salmonella typhi GN=nuoG
PE=3 SV=2
Length = 908
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKA- 60
CVR+ + A DLG+ G G + + SE SGN+++ICP G T K + +
Sbjct: 157 CVRYYKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYN 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLK-S 119
R W+++ +I ++G NI R E+ RI R N +N ++ D+ RF Y +
Sbjct: 217 RKWDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK 276
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLN 179
R P+ R D F +N A+ A+++ Q+K +++GI + ES AL++ +
Sbjct: 277 DRPRQPVQRRGDD-FITLNAEQAMQGAADILRQSK--KVIGIGSPRASIESNFALRELV- 332
Query: 180 RMGSNNVWCE-GTGAQSNAD-----LRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVN 233
G+ N + G Q LR G I ++ +E D L++G A V
Sbjct: 333 --GAENFYTGIARGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVA 390
Query: 234 ARIRKTVR 241
+R+ V+
Sbjct: 391 LAVRQAVK 398
>sp|P33602|NUOG_ECOLI NADH-quinone oxidoreductase subunit G OS=Escherichia coli (strain
K12) GN=nuoG PE=1 SV=4
Length = 908
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 14/248 (5%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKA- 60
CVR+ + A DLG+ G G + + SE SGN+++ICP G T K + +
Sbjct: 157 CVRYYKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYN 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLK-S 119
R W+++ +I ++G NI R E+ RI R N +N ++ D+ RF Y +
Sbjct: 217 RKWDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK 276
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLN 179
R P+ R D F +N A+ A+++ Q+K +++GI + ES AL++ +
Sbjct: 277 DRPRQPVQRRGDD-FITLNAEQAMQGAADILRQSK--KVIGIGSPRASVESNFALRELV- 332
Query: 180 RMGSNNVWCE-GTGAQSNAD-----LRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVN 233
G N + G Q LR G I ++ +E D L++G A V
Sbjct: 333 --GEENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVA 390
Query: 234 ARIRKTVR 241
+R+ V+
Sbjct: 391 LAVRQAVK 398
>sp|P61159|FDHA_METJA Formate dehydrogenase subunit alpha OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=fdhA PE=3 SV=2
Length = 673
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 199/500 (39%), Gaps = 102/500 (20%)
Query: 64 ELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQ-RL 122
E K TI VG + + + V+ I P INE + K +CY + S+ RL
Sbjct: 2 EFKIVNTICPYCGVGCGLGLVVKDGRVIGIHPNKRHPINEGKLCAKGNYCYQFIHSKDRL 61
Query: 123 NDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLNRMG 182
P+I+ G F W AL V+AE + K E + R ++ ++ + K +
Sbjct: 62 TKPLIKKESG-FVETTWNKALEVIAENLKTYKDEIGFFSSARCTNEDNYILQKFARVALK 120
Query: 183 SNNV-WC-----EGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARI 236
+NN+ C T +A SG + N SI +E ADC L++G+ + ++ RI
Sbjct: 121 TNNIDHCARLUHSATVTGMSACFGSGAMTN-SIEDIELADCILIIGSNTFEQHPLIARRI 179
Query: 237 ---------------RKTVRANNAKVGY-IGPATDLNYDHQHLGT--------------- 265
R+T+ A N+ + I P T++ + +
Sbjct: 180 MRAKDKGAKIIVIDPRRTITAKNSDIYLQIIPGTNVALINAMINVIIKENLIDKEFIKNR 239
Query: 266 --GPKTLLEIAEGRHP-FFSAISNAKNPVIIVGAGLFERKDKDAIFST---------VEA 313
G + L EI + P + S I +II A ++ ++ +I V+A
Sbjct: 240 TEGFEKLKEIIKKYTPEYASKICGVDKELIIESAKIYGNAERASIIYCMGVTQFTHGVDA 299
Query: 314 IAKKGNV------IRPDWNGLNVLLLNAAQAAALDLGLVPES------------------ 349
+ N+ I + G+N L A D+G +P
Sbjct: 300 VKALCNLAMITGNIGKEGTGVNPLRGQNNVQGACDMGALPNVFPGYQKVEDGYKLFEEYW 359
Query: 350 ----------------SNSIESAKFVYLMGADDV-------DLEK-LPNDAFVVYQGHHG 385
S ++ KF+Y+MG + + +EK L + F+V Q
Sbjct: 360 KTDLNPNSGLTIPEMIDESGKNIKFLYIMGENPIVSDPDVKHVEKALKSLDFLVVQDIFL 419
Query: 386 DHGVYRANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGM- 444
A+V+LPA+ ++EK+GT+ NTE Q AV G+A +DW II+ L+E G
Sbjct: 420 TETAKLADVVLPAACWAEKDGTFTNTERRVQLIRKAVNPPGEALEDWIIIKKLAEKLGYG 479
Query: 445 -RLPYDTIGGIRSRIRTVAP 463
+ Y+ + I + IR V P
Sbjct: 480 DKFNYNKVEDIFNEIRKVTP 499
>sp|P57257|NUOG_BUCAI NADH-quinone oxidoreductase subunit G OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=nuoG PE=3 SV=1
Length = 906
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 112/248 (45%), Gaps = 13/248 (5%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKA- 60
CVR+ E A D G+ G + G + ++ SE SGN+I++CP G T K + K
Sbjct: 157 CVRYYNEYADGVDFGVYGSNNNVYFGRIEDGVLESEHSGNLIELCPTGVFTDKTHSKKYN 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLK-S 119
R W+++ I +VG NI I R E+ RI R +E+IN I D RF Y +
Sbjct: 217 RKWDMQYAPGICHNCSVGCNISIGERYGEIRRIENRYHENINHYLICDLGRFGYSHTNLN 276
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKD--- 176
R P +N+ +A+ + + + K ++G+ S E+ AL++
Sbjct: 277 TRPKKPTYVNKYNDLNVLNFNEAIKIGVDFFKRYK--RVIGVGSARSSIENNFALQELVG 334
Query: 177 ---FLNRMGSNNVWCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVN 233
F N M + C + + L++ YI S+ +E D L++G ++ V
Sbjct: 335 KENFSNGMSNKEKECIKSILEF---LKNNYIYIPSLKEIESYDVILVLGEDLTQTSSRVA 391
Query: 234 ARIRKTVR 241
+R+ V+
Sbjct: 392 LAVRQAVK 399
>sp|Q8ZDL2|NUOG_YERPE NADH-quinone oxidoreductase subunit G OS=Yersinia pestis GN=nuoG
PE=3 SV=1
Length = 914
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 198/500 (39%), Gaps = 90/500 (18%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKA- 60
CVR+ + A DLG+ G G + SE SGN++++CP G T K + +
Sbjct: 157 CVRYYKDYADGTDLGVYGAHDNVYFGRTESGTLESEFSGNLVEVCPTGVFTDKTHSERYN 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYD--GLK 118
R W+++ +I +VG N R E+ RI R N +N ++ D+ RF Y LK
Sbjct: 217 RKWDMQFAPSICQQCSVGCNTSPGERYGELRRIENRYNGSVNHYFMCDRGRFGYGYVNLK 276
Query: 119 SQRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFL 178
+ +RG+D + +N + A+++ QAK + +GI + ES AL++ +
Sbjct: 277 DRPRQPQQLRGSD--WIHLNADQVMQGAADILRQAK--KTIGIGSPRASLESNFALRELV 332
Query: 179 NRMGSNNVWCE-GTGAQSNAD-----LRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMV 232
G+ N + G Q LR G I ++ +E D L++G A +
Sbjct: 333 ---GAENFYTGIAAGEQQRLQLMLKVLREGGIYTPALREIESYDAVLILGEDLTQTGARI 389
Query: 233 NARIRKTVRANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAE-GRHPFF---------- 281
+R+ V+ ++ D ++ I + +HP F
Sbjct: 390 ALSVRQAVKGKAREMAAAQKVADWQI---------AAIMNIGQHAKHPLFITNVDNTRMD 440
Query: 282 -SAISNAKNPV-------IIVGAGL---------FERKDKDAIFSTVEAI--AKKGNVIR 322
A N + PV + L +R K + V+A+ AKK +I
Sbjct: 441 DIAAWNYRAPVDDQARLGFAIAHALDESAPAVADLDRSLKGKVDIIVQALAGAKKPLIIT 500
Query: 323 PDWNGLNVLLLNAAQAAAL------DLGL--VPESSNSI--------------------- 353
G + ++ AA A D+G+ V ++NSI
Sbjct: 501 GSSAGSDAIIEAAANVAKALKNRGSDVGITFVASAANSIGLSMIGGGSLDQALELLTRGE 560
Query: 354 -ESAKF----VYLMGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTY 408
+SA +Y A D L N A ++ H + +AN+IL A++F+E +GT
Sbjct: 561 ADSAIVMENDLYRHAAKDKVDAALDNVANLIVVDHQRTAIMDKANLILSAASFAESDGTL 620
Query: 409 ENTEGCTQQTLPAV-PTVGD 427
N EG Q+ PT D
Sbjct: 621 VNQEGRAQRFFQVYDPTYYD 640
>sp|Q9I0J6|NUOG_PSEAE NADH-quinone oxidoreductase subunit G OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=nuoG PE=3 SV=1
Length = 905
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 132/553 (23%), Positives = 224/553 (40%), Gaps = 100/553 (18%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKA- 60
CVR+ + AG DLG+ G G + ++ SE SGN+ ++CP G T K + +
Sbjct: 157 CVRYYKDYAGGTDLGVYGAHDNVYFGRVEDGVLESEFSGNLTEVCPTGVFTDKTHSERYN 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGL-KS 119
R W+++ +I + G NI R E+ RI R N +N ++ D+ RF Y + +
Sbjct: 217 RKWDMQFAPSICHGCSSGCNISPGERYGEIRRIENRYNGSVNHYFLCDRGRFGYGYVNRE 276
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLN 179
R P++ + + D A + K ++VGI + ES AL++ +
Sbjct: 277 DRPRQPLLVLSKQKLSLDGALDQAAAL------LKERKVVGIGSPRASLESNFALRELV- 329
Query: 180 RMGSNNVWC---EGTGAQSNADL---RSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVN 233
G N + EG + L + G + SI +E D ++G AA +
Sbjct: 330 --GEGNFYSGINEGELDRLRLILQVMQEGPLPVPSIRDIEDHDAVFVLGEDLTQTAARIA 387
Query: 234 ARIRKTVRANNAKVG---YIGPATDLNYDH--QH-------LGTGPKTLLEIAE------ 275
+R++V+ ++ + P D + QH L ++AE
Sbjct: 388 LALRQSVKGKAVEMAADMKVQPWLDAAVKNIAQHAQNPLFIASVSATRLDDVAEETVHAA 447
Query: 276 ----GRHPFFSAISNAKNPVIIVGAGL------FERKDKDAIFSTVEAIAKKGNVIRPDW 325
R F A+++A +P A L F ++ DA+ + + GN +
Sbjct: 448 PDDLARLGF--AVAHAIDPSAPSVADLDPQAQAFAQRITDALLAAKRPLVVSGNSL---- 501
Query: 326 NGLNVLLLNAAQ-AAAL-------DLGLVPESSNSIESAKFVYLMGADDVD--LEKLPN- 374
G L+ AA A AL + LV +NS+ A L G D V+ LE+L +
Sbjct: 502 -GNKALIEAAANIAKALKQREKNGSISLVVGEANSLGLA----LFGGDSVEAALERLTSG 556
Query: 375 --DAFVVYQG-------------------------HHGDHGVYRANVILPASAFSEKEGT 407
DA VV + H +A+++LPA++F+E +GT
Sbjct: 557 QADAVVVLENDLYRRTDAARVDAALAAAKVVIVADHQQTATTAKAHLVLPAASFAEGDGT 616
Query: 408 YENTEGCTQQTLPAV-PTVGDA----RDDWKIIRAL-SEVAGMRLPYDTIGGIRSRIRTV 461
+ EG Q+ PT DA R+ W+ + A+ S + G R+ + + + +
Sbjct: 617 LVSQEGRAQRFFQVFDPTYYDARNMVREGWRWLHAIHSTLQGKRVDWTQLDHVTEAVAEA 676
Query: 462 APNLLHVDEREPA 474
P L + + PA
Sbjct: 677 KPILAGIRDAAPA 689
>sp|Q8K9Y2|NUOG_BUCAP NADH-quinone oxidoreductase subunit G OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=nuoG PE=3 SV=1
Length = 910
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKA- 60
CVR+ + A DL + G + G ++ +E SGN+I+ICP G T K + K
Sbjct: 157 CVRYYRDYADGTDLDVYGANNNIYFGRIEHGVLENEHSGNLIEICPTGVFTDKTHSKKYN 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLK-S 119
R W+++ I ++G NI I R E+ RI R +E IN I D RF Y
Sbjct: 217 RKWDMQYAPGICQNCSIGCNISIGERYGEIRRIENRYHESINHYLICDLGRFGYSHTNLK 276
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFLN 179
R P++ + +N+ A+ + K ++G+ S E+ AL++ +
Sbjct: 277 NRPKKPILSTKENDVNILNFNKAIEYATNFFQRYK--NVIGVGSIRSSIENNFALQELV- 333
Query: 180 RMGSNNVWCEGTGAQSNA-------DLRSGYIMNTSISGLEKADCFLLVG-----TQPRV 227
G N +C G + N+ L++ + S+ +E D L++G T PR+
Sbjct: 334 --GKEN-FCNGMSDKENSCIKLILDTLKNNQLYIPSLKEIESYDTILILGEDLTQTAPRI 390
Query: 228 EAAMVNA 234
A+ A
Sbjct: 391 ALAVRQA 397
>sp|Q7VRV7|NUOG_BLOFL NADH-quinone oxidoreductase subunit G OS=Blochmannia floridanus
GN=nuoG PE=3 SV=1
Length = 941
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 16/260 (6%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFK-A 60
CVR+ + AG DLG+ G G + ++ SE SGN+++ICP G T K + A
Sbjct: 165 CVRYYKDYAGGNDLGVFGVHDNIYFGRVQDGILQSEFSGNLVEICPTGVFTDKTQSKNYA 224
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRF-C-YDGLK 118
R W++ +I +VG NI + R ++ R+ R N +N ++ D+ RF C Y +K
Sbjct: 225 RKWDITFAPSICHQCSVGCNIILGERYGKLCRVENRYNSKVNGYFLCDRGRFGCNYIHIK 284
Query: 119 SQRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFL 178
+ R + + + + +N DA+ ++ +I+GI + ES AL+
Sbjct: 285 N-RPQKLLKKQNNCGYIEINAVDAVQDCVNIL--KSSNKIIGIGSTRASIESNFALR--- 338
Query: 179 NRMGSNNVWCEGTGAQSN------ADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMV 232
N +G++N + + + LR+ I S+ +E D L++G +A +
Sbjct: 339 NLVGADNFYSGMSFFEQERLSLIFEILRNSGIYIPSVCDIENYDAILILGEDVTQTSARI 398
Query: 233 NARIRKTVRANNAKVG-YIG 251
IR+ VR+ + + Y+G
Sbjct: 399 ALAIRQAVRSKSDHMAKYVG 418
>sp|Q60314|Y006_METJA Uncharacterized protein MJ0006 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0006 PE=3 SV=1
Length = 378
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 179/417 (42%), Gaps = 66/417 (15%)
Query: 65 LKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKS----- 119
+K TI +VG I + + +V+ P INE + C +G S
Sbjct: 1 MKVVHTICPGCSVGCGIDLIVKDDKVVGTYPYKRHPINE------GKNCSNGKNSYKIIY 54
Query: 120 --QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDF 177
+RL P+I+ +G+ W +AL+ +AE + ++I IA E ALK
Sbjct: 55 HEKRLKKPLIK-KNGKLVEATWDEALSFIAEKLKNYNADDITFIASGKCTNEDNYALKKL 113
Query: 178 LNRMGSNNVWCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEAAMVNARIR 237
++ + + C + N S T+I +E A +++G E A++ R
Sbjct: 114 VDSLKAKIGHCICNSPKVNYAEVS-----TTIDDIENAKNIIIIG-DVFSEHALIG---R 164
Query: 238 KTVRANNAKVGYIGPATDLNYDHQHLGTGPKTLLEIAEGRHPFFSA-----ISNA-KNPV 291
K ++A G + T K +L++ + +SN KN +
Sbjct: 165 KVIKAKEK-----GSKVTI------FNTEEKEILKLNADEFVKVDSYLGVDLSNVDKNTI 213
Query: 292 IIVGAGLFERKDKDAIFST-------VEAIAKKGNVIRPDWNGLNVLLLNAAQAAALDLG 344
II+ A + + D I T V +AK N + G+ L N + L
Sbjct: 214 IIINAPV----NVDEIIKTAKENKAKVLPVAKHCNTVGATLIGIPAL--NKDEYFEL--- 264
Query: 345 LVPESSNSIESAKFVYLMGADD--VDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAFS 402
++++KF+Y+MG + VD + L N F+V Q A+V+LP++ ++
Sbjct: 265 --------LKNSKFLYIMGENPALVDKDVLKNVEFLVVQDIIMTETAEMADVVLPSTCWA 316
Query: 403 EKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIR 459
EK+GT+ NT+ Q+ AV GDA DDW II++L+E G L ++++ I+ I
Sbjct: 317 EKDGTFINTDKRIQKINKAVNPPGDAMDDWLIIKSLAEKLGSDLGFNSLEDIQQDIH 373
>sp|Q87ZQ4|NUOG_PSESM NADH-quinone oxidoreductase subunit G OS=Pseudomonas syringae pv.
tomato (strain DC3000) GN=nuoG PE=3 SV=1
Length = 905
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKA- 60
CVRF + AG DLG+ G G + + SE SGN+ ++CP G T K + +
Sbjct: 157 CVRFYKDYAGGTDLGVYGAHDNVYFGRVEDGTLESEFSGNLTEVCPTGVFTDKTHSERYN 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGL-KS 119
R W+++ + +I + G NI R E+ RI R N +N+ ++ D+ RF Y + ++
Sbjct: 217 RKWDMQFSPSICHGCSSGCNISPGERYGELRRIENRYNGSVNQYFLCDRGRFGYGYVNRT 276
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFL 178
R P++ DG+ K ++ +AL A+++ + IVGI + ES AL++ +
Sbjct: 277 DRPRQPLL--VDGQVK-LSLDEALDKAADLL---RGRNIVGIGSPRASLESNYALRELV 329
Score = 35.8 bits (81), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 283 AISNAKNPVIIVGAGLFERKDKDAIFSTVEAIA---KKGNV--IRPDWNGLNVLLLNAAQ 337
A+ AK P+II G+ L +A + +A+ K+G++ I P+ N + + +
Sbjct: 486 ALLAAKRPLIISGSSLGSTALIEAAANIAKALKLRDKQGSISLIVPEANSMGLAMFGGDS 545
Query: 338 AAALDLGLVPESSNSIESAK--FVYLMGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVI 395
A ++ +++I + + A VD L V+ H RA+++
Sbjct: 546 VDAALQAVISGKADAIVVLENDLYRRVDAKIVD-AALSAAKVVIVADHQKTPTSDRAHLV 604
Query: 396 LPASAFSEKEGTYENTEGCTQQTLPAV-PTVGDA----RDDWKIIRAL 438
LPA++F+E +GT + EG Q+ PT DA + W+ + AL
Sbjct: 605 LPAASFAEGDGTLVSQEGRAQRFFQVFDPTYLDASILVHEGWRWLHAL 652
>sp|Q9KGW3|NUOG_PSEFL NADH-quinone oxidoreductase subunit G OS=Pseudomonas fluorescens
GN=nuoG PE=2 SV=1
Length = 904
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKA- 60
CVRF + AG DLG+ G G + + SE SGN+ ++CP G T K + +
Sbjct: 157 CVRFYKDYAGGTDLGVFGAHDNVYFGRVEDGTLESEFSGNLTEVCPTGVFTDKTHSERYN 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGL-KS 119
R W+++ + +I + G NI R E+ RI R N +N+ ++ D+ RF Y + +
Sbjct: 217 RKWDMQFSPSICHGCSSGCNISPGERYGELRRIENRFNGSVNQYFLCDRGRFGYGYVNRK 276
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFL 178
R P++ A+G +++ AL AE++ + IVGI + ES AL++ +
Sbjct: 277 DRPRQPLL--ANGAKLSLD--QALDKAAELL---RGRNIVGIGSPRASLESNYALRELV 328
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 283 AISNAKNPVIIVGAGLFERKDKDAIFSTVEAIA---KKGNV--IRPDWNGLNVLLLNAAQ 337
A+ AK P+II G L + +A + +A+ K G++ I P+ N L + +L
Sbjct: 485 ALLAAKRPLIIAGTSLGSKALIEAAANIAKALKLREKNGSISLIVPEANSLGLAMLGGES 544
Query: 338 AAALDLGLVPESSNSIESAKFVYLMGADDVDLEKLPNDAFVVYQGHHGDHGVY-RANVIL 396
A ++ S+++I + D ++ N A V+ H RA+++L
Sbjct: 545 VDAALQAVIDGSADAIVVLENDLYTRTDKAKVDAALNAAKVLIVADHQKTATTDRAHLVL 604
Query: 397 PASAFSEKEGTYENTEGCTQQTLPAV-PTVGDA----RDDWKIIRAL-SEVAGMRLPYDT 450
PA++F+E +GT + EG Q+ P DA + W+ + AL + + + +
Sbjct: 605 PAASFAEGDGTLVSQEGRAQRFFQVFDPQYLDASILVHEGWRWLHALRATLLDQPIDWTQ 664
Query: 451 IGGIRSRIRTVAPNLLHVDEREPA 474
+ + + + + +P L + + P+
Sbjct: 665 LDHVTAAVASSSPQLAAIVDAAPS 688
>sp|Q2YYT1|FDHL_STAAB Putative formate dehydrogenase SAB2186c OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB2186c PE=3 SV=1
Length = 984
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 196/510 (38%), Gaps = 109/510 (21%)
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKS- 119
R +K T+T+ VG + + ++ E++++ P + N+ K +F + + S
Sbjct: 253 RKERIKKTKTVCTYCGVGCSFEVWTKDREILKVQPSHDSPANKIATCVKGKFSWGHINSD 312
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAK----PEEIVGIAG-RLSDAESMMAL 174
QRL P++R +G F V W +AL V+A+ K P+ + I+ + ++ ES +
Sbjct: 313 QRLTKPLVR-KNGEFHEVEWDEALNVIADNFTSIKEKYGPDALSFISSSKATNEESYLMQ 371
Query: 175 KDFLNRMGSNNV-----WCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGT-----Q 224
K +G+NNV +C+ + + SI LEKA +L+GT
Sbjct: 372 KLARQVIGTNNVDNCSRYCQAPATKGLFRTVGHGGDSGSIEDLEKAAMSVLIGTNTAEAH 431
Query: 225 PRVEAAMVNAR-----------IRKTVRANNAKVGYI-GPATDLNY---------DH--- 260
P + + M A+ IRK A A Y P TDL + DH
Sbjct: 432 PVIASRMKRAQKLFGQKIHVFDIRKHEMAERADRFYQPKPGTDLAWLSAVTKYIIDHDLH 491
Query: 261 ----------------QHLGTGPKTLLEIAEGRH-----PFFSAISNAKNPVIIVGAGLF 299
+ L T E A G F + A++ VI G+
Sbjct: 492 DKAFIEEWVEDFDEYYKSLETFTMAFAEEATGIPEAELIKFAEECAKAESVVICWAMGIT 551
Query: 300 ERK-DKDAIFSTVEAIAKKGNVIRPDWNGLNVLLLNAAQAAALDLGLVPES---SNSIES 355
++ D+ + + GN RP + N Q + D+G +P+ SIE+
Sbjct: 552 QQDIGSDSSTAISNLLLVTGNYRRPSTGAYPLRGHNNVQGCS-DMGSMPDKITGYQSIEA 610
Query: 356 ----AKF------------------------------VYLMGAD----DVDLE----KLP 373
AKF +YL G D D ++
Sbjct: 611 DDIRAKFEKEYGVKLNPKVGKDNHEMVEGVHDGEIHSLYLYGEDTGIVDSNINFVQAAFE 670
Query: 374 NDAFVVYQGHHGDHGVYRANVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWK 433
N F+V Q A+V+LPAS EK+GT+ NTE Q+ A+ +G+++ DWK
Sbjct: 671 NLDFMVVQDEFLTFTATFADVVLPASPSLEKDGTFTNTERRIQRLYQALKPLGESKPDWK 730
Query: 434 IIRALSEVAGMRLPYDTIGGIRSRIRTVAP 463
I +A++ G Y I I + P
Sbjct: 731 IFQAIANKLGFDWNYKHPSEIMDEIARLTP 760
>sp|Q88FH2|NUOG_PSEPK NADH-quinone oxidoreductase subunit G OS=Pseudomonas putida (strain
KT2440) GN=nuoG PE=3 SV=1
Length = 904
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 9/179 (5%)
Query: 2 CVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKA- 60
CVR+ + AG DLG+ G G + ++ SE SGN+ ++CP G T K + +
Sbjct: 157 CVRYYKDYAGGTDLGVYGAHDNVYFGRVEDGVLESEFSGNLTEVCPTGVFTDKTHSERYN 216
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGL-KS 119
R W+++ +I + G NI R E+ RI R N +N+ ++ D+ RF Y + +
Sbjct: 217 RKWDMQFAPSICHGCSSGCNISPGERYGELRRIENRFNGSVNQYFLCDRGRFGYGYVNRK 276
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAGRLSDAESMMALKDFL 178
R P + ADG ++ AL A+++ + IVGI + ES L++ +
Sbjct: 277 DRPRQPQL--ADGTKLGLD--AALDKAADLL---RGRTIVGIGSPRASLESNYGLRELV 328
>sp|O34720|YJGC_BACSU Probable oxidoreductase YjgC OS=Bacillus subtilis (strain 168)
GN=yjgC PE=3 SV=1
Length = 985
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKSQ 120
R+ +K T+T+ VG + + ++G +++++ P+ N K +F +D + S+
Sbjct: 254 RDERIKKTKTVCTYCGVGCSFDVWTKGRDILKVEPQEEAPANGISTCVKGKFGWDFVNSE 313
Query: 121 -RLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAK----PEEIVGI-AGRLSDAESMMAL 174
RL P+IR D F+ W +AL ++A + K P+ + I + + ++ ES +
Sbjct: 314 ERLTKPLIREGD-HFREAEWEEALLLIASKFTELKEAFGPDSLAFITSSKCTNEESYLMQ 372
Query: 175 KDFLNRMGSNNV-----WCEGTGAQSNADLRSGYIMNT-SISGLEKADCFLLVGTQPRVE 228
K +G+NNV +C+ + A + GY ++ SI+ + +AD L++G+
Sbjct: 373 KLARGVIGTNNVDNCSRYCQ-SPATAGLFRTVGYGGDSGSITDIAQADLVLIIGSNTSES 431
Query: 229 AAMVNARIRKTVRANNAKV 247
+++ RI++ + KV
Sbjct: 432 HPVLSTRIKRAHKLRGQKV 450
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 333 LNAAQAAALDLGLVPESSNSIESAKFVYLMGADDVDLEKLPNDAFVVYQGHHGDHGVYRA 392
L A ++GLV + N + +A EKL D FVV Q A
Sbjct: 646 LKAMYVKGEEMGLVDSNINHVHAA------------YEKL--DFFVV-QDIFLSRTAEFA 690
Query: 393 NVILPASAFSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIG 452
+V+LPAS EKEGT+ NTE Q+ +G+++ DW+II ++ G Y+
Sbjct: 691 DVVLPASPSLEKEGTFTNTERRIQRLYQVFEPLGESKPDWQIIMEVANKLGAGWLYEHPA 750
Query: 453 GIRSRIRTVAP 463
I ++P
Sbjct: 751 DIMEEAAKLSP 761
>sp|Q795Y4|FDHL_BACSU Putative formate dehydrogenase YrhE OS=Bacillus subtilis (strain
168) GN=yrhE PE=3 SV=1
Length = 980
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 351 NSIESAKF--VYLMGADDVDLEKLPNDA--------FVVYQGHHGDHGVYRANVILPASA 400
++IE K +YL+G D ++ N F V Q A+V+LPA+
Sbjct: 644 HAIEEGKMKAMYLVGEDMALVDSNANHVHDILSSLDFFVVQDIFLSRTAQYADVVLPATP 703
Query: 401 FSEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRT 460
EK+GT+ NTE Q+ A+PT+GDA+ DW II+ ++ G Y I S + +
Sbjct: 704 SLEKDGTFTNTERRVQRLYQALPTLGDAKPDWWIIQEVANRLGANWNYSHPSDIFSEMAS 763
Query: 461 VAP 463
++P
Sbjct: 764 LSP 766
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKS- 119
R K T+T+ VG + + ++G ++++I P + +N K +F +D + S
Sbjct: 259 RETRTKKTKTVCTFCGVGCSFEVWTKGRDILKIQPVSDAPVNAISTCVKGKFGWDFVNSK 318
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEEIVGIAG-----RLSDAESMMAL 174
+R+ P+IR +G F +W +AL +VA + K + G G ++++ E+ +
Sbjct: 319 ERITKPLIR-KNGAFVESSWEEALDLVASRLGSIKEQYGKGSVGFISSSKITNEENYVIQ 377
Query: 175 KDFLNRMGSNNVWCEGTGAQSNADLRSGYIMNTSISG-------LEKADCFLLVGTQPRV 227
K +NNV QS A G + G + KA ++VG P
Sbjct: 378 KLARQVFETNNVDNCSRYCQSPA--TDGLFRTVGMGGDAGTIKDIAKAGLVIIVGANPAE 435
Query: 228 EAAMVNARIRKTVRANNAKV 247
++ R+++ + + K+
Sbjct: 436 GHPVLATRVKRAHKLHGQKL 455
>sp|Q49ZN0|FDHL_STAS1 Putative formate dehydrogenase SSP0601 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=SSP0601 PE=3 SV=1
Length = 984
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 61 RNWELKGTETIDVTDAVGSNIRIDSRGPEVMRILPRLNEDINEEWISDKTRFCYDGLKS- 119
R ++ T+T+ VG + + ++ EV+++ P+ N+ K +F +D + S
Sbjct: 253 REERIEKTKTVCTYCGVGCSFDVWTKNREVLKVQPQHESPANKISSCVKGKFGWDYVDSD 312
Query: 120 QRLNDPMIRGADGRFKAVNWRDALAVVAEVMLQAKPEE-IVGIA----GRLSDAESMMAL 174
+RL P++R +G+F+ V W +AL+VVAE + K G+A + ++ ES +
Sbjct: 313 ERLTKPLVR-KNGQFEEVEWEEALSVVAENFNKVKGTHGSDGLAFISSSKATNEESYLMQ 371
Query: 175 KDFLNRMGSNNV-----WCEGTGAQSNADLRSGYIMNTSISGLEKADCFLLVGTQPRVEA 229
K +G+NNV +C+ + + SI LE AD +L+GT
Sbjct: 372 KLARQVIGTNNVDNCSRYCQAPATKGLFRTVGHGGDSGSIEDLEIADMVVLIGTNTAEAH 431
Query: 230 AMVNARIRKTVRANN 244
++ +RI++ + N
Sbjct: 432 PVIASRIKRGHKLYN 446
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 342 DLGLVPESSNSIESAKFVYLMGADDVDLEKLPNDAFVVYQGHHGDHGVYRANVILPASAF 401
D G+V + N +++A LEK+ F+V Q A+V+LPAS
Sbjct: 654 DTGIVDSNINFVQAA------------LEKV---GFLVVQDEFFTFTATYADVVLPASPS 698
Query: 402 SEKEGTYENTEGCTQQTLPAVPTVGDARDDWKIIRALSEVAGMRLPYDTIGGIRSRIRTV 461
EK GT+ NTE Q+ A+ GD++ DW+II+A+++ G Y I I +
Sbjct: 699 LEKTGTFTNTERRIQRLFQALEPKGDSKPDWQIIQAVAKAMGYDWNYTHPSQIMDEIARL 758
Query: 462 AP 463
P
Sbjct: 759 TP 760
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 189,990,236
Number of Sequences: 539616
Number of extensions: 8108473
Number of successful extensions: 19946
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 19489
Number of HSP's gapped (non-prelim): 337
length of query: 523
length of database: 191,569,459
effective HSP length: 122
effective length of query: 401
effective length of database: 125,736,307
effective search space: 50420259107
effective search space used: 50420259107
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)