Query 009862
Match_columns 523
No_of_seqs 517 out of 2908
Neff 8.0
Searched_HMMs 46136
Date Thu Mar 28 18:13:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009862.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009862hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 99.9 3E-24 6.5E-29 226.6 23.1 261 223-515 210-472 (485)
2 KOG0254 Predicted transporter 99.8 2.6E-19 5.6E-24 194.7 24.7 268 220-517 232-503 (513)
3 KOG0253 Synaptic vesicle trans 99.8 7E-18 1.5E-22 168.0 17.0 260 223-505 256-527 (528)
4 TIGR01299 synapt_SV2 synaptic 99.8 1.4E-17 3.1E-22 186.2 21.3 145 349-505 597-741 (742)
5 PF00083 Sugar_tr: Sugar (and 99.8 1.5E-21 3.2E-26 208.1 -11.1 255 221-512 195-451 (451)
6 TIGR00887 2A0109 phosphate:H+ 99.8 2.4E-17 5.3E-22 178.7 21.3 213 290-510 273-501 (502)
7 PRK10077 xylE D-xylose transpo 99.7 3.8E-16 8.2E-21 167.7 21.8 196 308-518 277-478 (479)
8 KOG0252 Inorganic phosphate tr 99.7 1.7E-17 3.7E-22 170.0 9.4 314 192-514 155-514 (538)
9 PRK10642 proline/glycine betai 99.6 6E-15 1.3E-19 159.6 18.4 240 247-505 189-437 (490)
10 TIGR00879 SP MFS transporter, 99.6 1.7E-14 3.6E-19 153.1 21.1 196 301-507 283-480 (481)
11 TIGR01299 synapt_SV2 synaptic 99.6 2.6E-14 5.6E-19 160.1 21.5 161 319-500 184-357 (742)
12 TIGR00898 2A0119 cation transp 99.5 7.2E-14 1.6E-18 151.4 16.2 146 351-507 359-504 (505)
13 TIGR02332 HpaX 4-hydroxyphenyl 99.5 2.4E-13 5.3E-18 143.8 18.3 180 303-502 9-194 (412)
14 PRK09952 shikimate transporter 99.5 6.1E-13 1.3E-17 141.9 21.1 235 248-501 197-436 (438)
15 PRK11663 regulatory protein Uh 99.5 5.5E-13 1.2E-17 142.0 19.7 180 301-500 22-201 (434)
16 PRK03545 putative arabinose tr 99.5 7.4E-13 1.6E-17 138.7 18.7 163 319-501 26-188 (390)
17 TIGR00710 efflux_Bcr_CflA drug 99.5 8.6E-13 1.9E-17 136.9 18.4 168 316-503 19-186 (385)
18 PRK10213 nepI ribonucleoside t 99.5 9.5E-13 2.1E-17 138.4 18.8 162 320-501 38-199 (394)
19 COG2271 UhpC Sugar phosphate p 99.5 3.4E-13 7.5E-18 137.9 14.6 266 215-498 150-435 (448)
20 TIGR00895 2A0115 benzoate tran 99.5 3.9E-13 8.5E-18 139.5 15.4 165 317-501 32-196 (398)
21 PRK10473 multidrug efflux syst 99.5 1.1E-12 2.4E-17 137.3 17.9 180 303-502 4-183 (392)
22 PRK15403 multidrug efflux syst 99.5 1.4E-12 3.1E-17 138.0 18.7 165 318-502 32-196 (413)
23 PRK10054 putative transporter; 99.5 1.2E-12 2.7E-17 137.6 18.0 167 315-501 20-186 (395)
24 COG2814 AraJ Arabinose efflux 99.5 1.9E-12 4.2E-17 133.6 18.1 161 318-498 29-189 (394)
25 PRK10406 alpha-ketoglutarate t 99.5 3.3E-12 7E-17 135.9 20.6 231 248-503 196-428 (432)
26 TIGR00711 efflux_EmrB drug res 99.5 3.7E-13 8.1E-18 144.5 13.2 169 314-502 14-182 (485)
27 PRK10489 enterobactin exporter 99.5 1.3E-12 2.8E-17 138.1 17.0 174 319-511 240-413 (417)
28 PRK14995 methyl viologen resis 99.5 9.7E-13 2.1E-17 142.6 16.2 178 304-501 8-186 (495)
29 PRK11551 putative 3-hydroxyphe 99.5 1.8E-12 3.9E-17 136.2 17.6 158 317-494 235-393 (406)
30 PLN00028 nitrate transmembrane 99.4 5E-12 1.1E-16 136.4 20.8 179 298-498 33-220 (476)
31 TIGR00893 2A0114 d-galactonate 99.4 1.1E-12 2.5E-17 135.2 15.0 165 318-502 10-174 (399)
32 TIGR00891 2A0112 putative sial 99.4 3.3E-12 7E-17 133.2 18.4 179 301-501 12-192 (405)
33 PRK10504 putative transporter; 99.4 2.9E-12 6.2E-17 137.6 18.3 179 301-500 10-188 (471)
34 PRK11652 emrD multidrug resist 99.4 4E-12 8.6E-17 133.2 18.2 183 299-502 6-188 (394)
35 PRK09556 uhpT sugar phosphate 99.4 5E-12 1.1E-16 135.9 19.1 175 303-495 260-447 (467)
36 PRK11551 putative 3-hydroxyphe 99.4 3.3E-12 7.2E-17 134.2 17.1 179 302-501 16-194 (406)
37 TIGR00889 2A0110 nucleoside tr 99.4 7.8E-12 1.7E-16 132.6 19.7 173 320-502 226-407 (418)
38 PRK10091 MFS transport protein 99.4 4.1E-12 8.8E-17 132.8 17.2 165 318-502 19-183 (382)
39 PRK15462 dipeptide/tripeptide 99.4 5E-12 1.1E-16 135.7 18.1 172 300-490 8-182 (493)
40 PRK15402 multidrug efflux syst 99.4 6.8E-12 1.5E-16 132.1 18.6 165 318-502 29-193 (406)
41 PRK11663 regulatory protein Uh 99.4 5.8E-12 1.2E-16 134.1 18.0 170 317-503 258-430 (434)
42 PRK12307 putative sialic acid 99.4 1.1E-11 2.3E-16 131.2 19.9 190 291-500 221-412 (426)
43 PRK15075 citrate-proton sympor 99.4 9.2E-12 2E-16 132.5 19.5 176 315-505 251-427 (434)
44 PRK12307 putative sialic acid 99.4 4.8E-12 1E-16 133.8 17.2 162 302-484 19-180 (426)
45 COG2271 UhpC Sugar phosphate p 99.4 2.1E-12 4.6E-17 132.2 13.1 181 300-500 27-209 (448)
46 PRK03893 putative sialic acid 99.4 6.4E-12 1.4E-16 135.6 17.8 179 300-500 19-197 (496)
47 TIGR00890 2A0111 Oxalate/Forma 99.4 1.5E-11 3.3E-16 126.4 19.3 151 321-489 224-374 (377)
48 TIGR00900 2A0121 H+ Antiporter 99.4 1E-11 2.2E-16 127.3 17.6 168 318-500 15-183 (365)
49 TIGR00903 2A0129 major facilit 99.4 6.9E-12 1.5E-16 130.8 16.4 163 318-501 7-169 (368)
50 PRK10207 dipeptide/tripeptide 99.4 8.7E-12 1.9E-16 134.8 17.7 167 299-484 12-181 (489)
51 PRK09874 drug efflux system pr 99.4 1.8E-11 3.9E-16 128.3 19.4 164 317-500 29-196 (408)
52 PRK03699 putative transporter; 99.4 2.6E-11 5.7E-16 127.3 20.2 157 318-494 23-180 (394)
53 PF07690 MFS_1: Major Facilita 99.4 4.4E-12 9.6E-17 129.5 13.8 163 318-500 12-175 (352)
54 TIGR00881 2A0104 phosphoglycer 99.4 2.4E-12 5.2E-17 132.5 11.6 164 318-501 11-175 (379)
55 PRK11102 bicyclomycin/multidru 99.4 8.6E-12 1.9E-16 129.5 15.6 164 318-501 7-170 (377)
56 TIGR00886 2A0108 nitrite extru 99.4 2.4E-11 5.2E-16 125.4 17.7 165 315-500 14-191 (366)
57 PRK11273 glpT sn-glycerol-3-ph 99.4 2.7E-11 5.9E-16 129.7 18.4 164 321-501 48-212 (452)
58 PRK11646 multidrug resistance 99.4 2.2E-11 4.9E-16 128.3 17.5 164 317-500 25-188 (400)
59 PRK11273 glpT sn-glycerol-3-ph 99.3 6.5E-11 1.4E-15 126.8 20.8 168 318-502 269-441 (452)
60 TIGR00893 2A0114 d-galactonate 99.3 4.8E-11 1E-15 123.0 18.9 166 317-495 230-397 (399)
61 TIGR00924 yjdL_sub1_fam amino 99.3 3.4E-11 7.4E-16 129.9 17.8 172 301-490 10-185 (475)
62 TIGR00892 2A0113 monocarboxyla 99.3 3.4E-11 7.4E-16 129.1 17.2 160 319-498 36-195 (455)
63 TIGR00890 2A0111 Oxalate/Forma 99.3 1.9E-11 4E-16 125.8 14.6 161 318-499 19-179 (377)
64 TIGR00903 2A0129 major facilit 99.3 5.1E-11 1.1E-15 124.3 18.0 215 248-494 142-362 (368)
65 PRK11043 putative transporter; 99.3 7.1E-11 1.5E-15 124.0 19.1 147 341-498 36-182 (401)
66 TIGR00899 2A0120 sugar efflux 99.3 1.7E-10 3.8E-15 119.2 21.8 155 320-494 217-371 (375)
67 TIGR00887 2A0109 phosphate:H+ 99.3 8E-11 1.7E-15 127.8 20.0 149 347-500 56-227 (502)
68 PRK10077 xylE D-xylose transpo 99.3 7.5E-11 1.6E-15 126.7 19.4 159 341-501 50-218 (479)
69 PRK15011 sugar efflux transpor 99.3 1.5E-10 3.3E-15 121.5 21.0 162 318-500 232-393 (393)
70 PRK10642 proline/glycine betai 99.3 6.9E-11 1.5E-15 127.9 18.4 146 353-501 63-216 (490)
71 PRK09528 lacY galactoside perm 99.3 6.6E-11 1.4E-15 125.3 17.3 143 348-500 263-406 (420)
72 TIGR00712 glpT glycerol-3-phos 99.3 5.5E-11 1.2E-15 126.7 16.6 184 301-501 26-210 (438)
73 KOG1330 Sugar transporter/spin 99.3 2.2E-12 4.8E-17 133.2 5.5 182 301-503 33-215 (493)
74 TIGR00880 2_A_01_02 Multidrug 99.3 2.5E-11 5.4E-16 106.3 11.5 136 355-500 6-141 (141)
75 cd06174 MFS The Major Facilita 99.3 7E-11 1.5E-15 120.0 16.4 157 317-493 14-170 (352)
76 PRK09556 uhpT sugar phosphate 99.3 3.1E-11 6.8E-16 129.7 14.2 167 318-499 45-214 (467)
77 PRK12382 putative transporter; 99.3 9.7E-11 2.1E-15 122.6 17.4 160 317-487 30-189 (392)
78 TIGR00897 2A0118 polyol permea 99.3 3.9E-10 8.4E-15 118.8 21.6 163 316-495 236-399 (402)
79 PRK09584 tppB putative tripept 99.3 1.9E-10 4.1E-15 124.8 19.7 170 300-488 20-192 (500)
80 PRK05122 major facilitator sup 99.3 1.1E-10 2.4E-15 122.4 17.3 162 317-489 30-191 (399)
81 PRK09705 cynX putative cyanate 99.3 2.5E-10 5.4E-15 120.0 19.8 167 317-504 220-388 (393)
82 TIGR00883 2A0106 metabolite-pr 99.3 1.1E-10 2.4E-15 120.8 16.8 165 303-483 221-387 (394)
83 PRK10489 enterobactin exporter 99.3 9.1E-11 2E-15 124.0 16.1 191 290-500 9-199 (417)
84 PRK15034 nitrate/nitrite trans 99.3 4.1E-10 8.9E-15 119.9 20.7 184 302-500 34-235 (462)
85 TIGR00879 SP MFS transporter, 99.3 6.9E-11 1.5E-15 125.4 14.9 147 347-501 71-220 (481)
86 TIGR00899 2A0120 sugar efflux 99.3 1.1E-10 2.4E-15 120.7 16.1 166 317-501 12-180 (375)
87 PRK09705 cynX putative cyanate 99.3 1.8E-10 3.9E-15 121.1 17.7 150 319-489 26-176 (393)
88 TIGR00712 glpT glycerol-3-phos 99.2 1.3E-10 2.8E-15 123.9 16.5 172 317-502 266-438 (438)
89 TIGR00897 2A0118 polyol permea 99.2 1.7E-10 3.7E-15 121.5 17.0 184 298-498 10-194 (402)
90 PRK03545 putative arabinose tr 99.2 5.9E-10 1.3E-14 116.8 20.6 159 319-497 222-380 (390)
91 PRK03893 putative sialic acid 99.2 1.7E-10 3.6E-15 124.6 16.9 151 321-488 294-444 (496)
92 TIGR00894 2A0114euk Na(+)-depe 99.2 8E-11 1.7E-15 126.3 14.2 152 340-500 70-222 (465)
93 PRK10406 alpha-ketoglutarate t 99.2 2.8E-10 6.1E-15 121.1 18.0 177 317-502 37-223 (432)
94 PRK15075 citrate-proton sympor 99.2 2.7E-10 5.9E-15 121.3 17.7 171 303-484 16-199 (434)
95 TIGR00891 2A0112 putative sial 99.2 3.4E-10 7.5E-15 117.9 18.1 143 319-479 255-398 (405)
96 PRK05122 major facilitator sup 99.2 6E-10 1.3E-14 116.9 19.9 162 318-502 232-393 (399)
97 PRK03699 putative transporter; 99.2 3.3E-10 7.1E-15 119.0 17.8 159 317-495 220-378 (394)
98 TIGR00898 2A0119 cation transp 99.2 1.5E-10 3.3E-15 125.4 15.2 140 347-500 127-266 (505)
99 TIGR02332 HpaX 4-hydroxyphenyl 99.2 4.1E-10 9E-15 119.1 18.1 157 311-485 251-409 (412)
100 cd06174 MFS The Major Facilita 99.2 6E-10 1.3E-14 113.1 18.3 160 317-495 190-350 (352)
101 PRK12382 putative transporter; 99.2 7.4E-10 1.6E-14 115.9 19.4 157 318-496 232-388 (392)
102 TIGR00792 gph sugar (Glycoside 99.2 4.6E-10 1E-14 119.0 17.9 155 348-512 258-434 (437)
103 PLN00028 nitrate transmembrane 99.2 4.4E-10 9.4E-15 121.3 17.4 157 318-495 268-431 (476)
104 PF11700 ATG22: Vacuole efflux 99.2 8.7E-10 1.9E-14 118.5 19.3 186 307-504 286-474 (477)
105 TIGR00806 rfc RFC reduced fola 99.2 7.7E-10 1.7E-14 116.5 18.3 177 301-500 27-205 (511)
106 PRK11195 lysophospholipid tran 99.2 6E-10 1.3E-14 117.1 17.6 140 347-501 38-177 (393)
107 PRK06814 acylglycerophosphoeth 99.2 5.6E-10 1.2E-14 132.9 18.8 147 347-501 52-198 (1140)
108 PRK11010 ampG muropeptide tran 99.2 1.4E-09 3.1E-14 117.8 20.1 166 319-500 239-405 (491)
109 KOG0255 Synaptic vesicle trans 99.2 4E-10 8.7E-15 122.8 16.0 141 347-501 118-258 (521)
110 PRK03633 putative MFS family t 99.2 7.9E-10 1.7E-14 115.5 17.6 152 301-473 6-157 (381)
111 PRK09952 shikimate transporter 99.2 7.8E-10 1.7E-14 118.0 17.6 144 355-501 72-223 (438)
112 PRK09874 drug efflux system pr 99.2 6.3E-10 1.4E-14 116.6 16.4 138 351-498 262-399 (408)
113 TIGR00902 2A0127 phenyl propri 99.2 3.1E-09 6.6E-14 111.2 21.2 153 317-491 220-373 (382)
114 TIGR00885 fucP L-fucose:H+ sym 99.1 1.8E-09 3.9E-14 114.3 19.1 165 318-499 19-210 (410)
115 KOG2615 Permease of the major 99.1 9.7E-11 2.1E-15 118.3 8.3 144 347-501 68-217 (451)
116 TIGR00895 2A0115 benzoate tran 99.1 9.6E-10 2.1E-14 114.0 16.3 158 291-469 240-397 (398)
117 KOG0255 Synaptic vesicle trans 99.1 3.4E-09 7.3E-14 115.6 20.9 156 350-513 353-508 (521)
118 PRK15011 sugar efflux transpor 99.1 2.2E-09 4.7E-14 112.8 18.5 165 318-502 31-199 (393)
119 TIGR00881 2A0104 phosphoglycer 99.1 1.6E-09 3.4E-14 111.5 16.8 146 318-478 232-378 (379)
120 PRK03633 putative MFS family t 99.1 5E-09 1.1E-13 109.4 20.6 154 319-495 217-370 (381)
121 PRK08633 2-acyl-glycerophospho 99.1 1.9E-09 4.1E-14 128.3 19.1 146 349-501 49-203 (1146)
122 COG2814 AraJ Arabinose efflux 99.1 6.3E-09 1.4E-13 107.7 20.3 160 317-497 226-386 (394)
123 COG2223 NarK Nitrate/nitrite t 99.1 2.4E-09 5.2E-14 110.0 16.5 150 340-499 43-195 (417)
124 TIGR00900 2A0121 H+ Antiporter 99.1 3.3E-09 7.1E-14 108.7 17.8 134 323-474 232-365 (365)
125 COG2223 NarK Nitrate/nitrite t 99.1 2.5E-09 5.4E-14 109.9 16.4 190 290-496 210-400 (417)
126 TIGR00894 2A0114euk Na(+)-depe 99.1 6E-09 1.3E-13 111.8 19.5 187 290-495 253-448 (465)
127 PRK08633 2-acyl-glycerophospho 99.1 3.2E-09 6.9E-14 126.3 18.9 162 319-498 249-411 (1146)
128 TIGR00882 2A0105 oligosacchari 99.1 4.7E-09 1E-13 110.2 17.7 162 318-495 231-393 (396)
129 TIGR00896 CynX cyanate transpo 99.1 2.5E-09 5.4E-14 110.4 15.3 149 318-488 16-166 (355)
130 PRK10133 L-fucose transporter; 99.1 7.5E-09 1.6E-13 110.6 19.2 149 301-470 26-177 (438)
131 TIGR00892 2A0113 monocarboxyla 99.1 7.8E-10 1.7E-14 118.6 11.2 155 317-491 256-415 (455)
132 PRK11010 ampG muropeptide tran 99.1 5.5E-09 1.2E-13 113.2 17.9 180 301-501 12-198 (491)
133 PRK15034 nitrate/nitrite trans 99.0 1.2E-08 2.6E-13 108.8 19.8 179 303-497 254-454 (462)
134 TIGR00901 2A0125 AmpG-related 99.0 3E-09 6.5E-14 109.8 14.9 163 320-501 6-182 (356)
135 TIGR02718 sider_RhtX_FptX side 99.0 2E-08 4.4E-13 105.1 21.4 159 319-491 225-385 (390)
136 PRK11902 ampG muropeptide tran 99.0 6.7E-09 1.5E-13 109.3 17.3 167 315-501 12-185 (402)
137 TIGR01301 GPH_sucrose GPH fami 99.0 9E-09 1.9E-13 110.3 18.3 190 301-502 4-223 (477)
138 PTZ00207 hypothetical protein; 99.0 8.8E-09 1.9E-13 112.8 18.4 164 318-498 43-206 (591)
139 PRK09528 lacY galactoside perm 99.0 1E-08 2.2E-13 108.5 18.5 168 317-500 25-194 (420)
140 TIGR00805 oat sodium-independe 99.0 1.8E-09 3.8E-14 120.4 13.1 190 300-500 31-283 (633)
141 PF13347 MFS_2: MFS/sugar tran 99.0 2E-08 4.4E-13 106.7 20.7 166 289-476 216-388 (428)
142 COG2211 MelB Na+/melibiose sym 99.0 2E-08 4.3E-13 106.1 19.8 162 347-517 272-455 (467)
143 PF06609 TRI12: Fungal trichot 99.0 1.9E-09 4.2E-14 117.4 12.0 137 347-494 78-214 (599)
144 PF05977 MFS_3: Transmembrane 99.0 9.4E-09 2E-13 111.7 16.9 140 347-491 45-184 (524)
145 TIGR00882 2A0105 oligosacchari 99.0 1.9E-08 4.2E-13 105.5 18.4 170 317-500 17-186 (396)
146 KOG0254 Predicted transporter 99.0 1.4E-08 3E-13 110.7 17.4 139 350-500 92-232 (513)
147 KOG2532 Permease of the major 99.0 1.6E-08 3.5E-13 108.2 17.3 166 340-514 67-237 (466)
148 PRK10429 melibiose:sodium symp 99.0 2E-08 4.3E-13 108.3 18.0 122 349-475 268-396 (473)
149 KOG3764 Vesicular amine transp 99.0 1.5E-09 3.2E-14 110.4 8.5 148 347-504 106-254 (464)
150 PRK10504 putative transporter; 99.0 1.3E-08 2.9E-13 109.2 16.3 142 318-475 277-418 (471)
151 COG2270 Permeases of the major 99.0 1.3E-08 2.8E-13 104.8 15.1 182 304-504 254-435 (438)
152 PRK11902 ampG muropeptide tran 99.0 3.6E-08 7.7E-13 103.8 19.0 143 341-493 240-386 (402)
153 PF05977 MFS_3: Transmembrane 99.0 2.7E-08 5.9E-13 108.2 18.5 162 321-501 237-399 (524)
154 TIGR01272 gluP glucose/galacto 99.0 4.8E-08 1E-12 99.5 19.2 161 302-483 141-301 (310)
155 PRK09848 glucuronide transport 99.0 1.8E-08 4E-13 107.6 16.9 141 318-475 244-391 (448)
156 TIGR00710 efflux_Bcr_CflA drug 98.9 6.3E-08 1.4E-12 100.4 20.3 157 318-491 222-378 (385)
157 PF03825 Nuc_H_symport: Nucleo 98.9 7.1E-08 1.5E-12 101.6 20.8 167 318-500 223-398 (400)
158 PRK10473 multidrug efflux syst 98.9 3.9E-08 8.5E-13 102.9 18.8 140 320-483 221-360 (392)
159 PRK11128 putative 3-phenylprop 98.9 1E-07 2.2E-12 99.6 21.1 148 318-487 221-369 (382)
160 PRK09669 putative symporter Ya 98.9 3.8E-08 8.3E-13 105.1 18.1 117 351-475 268-391 (444)
161 PRK10091 MFS transport protein 98.9 6.6E-08 1.4E-12 101.1 19.4 158 319-495 216-374 (382)
162 TIGR00901 2A0125 AmpG-related 98.9 1.5E-08 3.1E-13 104.6 14.2 155 291-456 199-355 (356)
163 PRK15402 multidrug efflux syst 98.9 8E-08 1.7E-12 101.1 19.8 165 319-498 232-396 (406)
164 TIGR00883 2A0106 metabolite-pr 98.9 3.8E-08 8.2E-13 101.8 16.4 141 358-501 46-194 (394)
165 PRK10213 nepI ribonucleoside t 98.9 2.5E-07 5.5E-12 97.3 21.0 156 318-494 232-388 (394)
166 COG3104 PTR2 Dipeptide/tripept 98.8 1.8E-08 3.9E-13 105.8 11.7 183 300-496 20-205 (498)
167 PRK11462 putative transporter; 98.8 2.1E-07 4.5E-12 100.1 20.2 117 351-475 267-390 (460)
168 TIGR00902 2A0127 phenyl propri 98.8 8.5E-08 1.8E-12 100.3 16.5 149 316-486 18-168 (382)
169 PRK06814 acylglycerophosphoeth 98.8 6E-08 1.3E-12 115.6 16.7 163 318-490 241-415 (1140)
170 PRK11128 putative 3-phenylprop 98.8 9.2E-08 2E-12 100.0 15.7 162 317-500 19-181 (382)
171 KOG0569 Permease of the major 98.8 2.1E-07 4.5E-12 99.3 18.3 144 350-501 63-208 (485)
172 KOG2532 Permease of the major 98.8 9.7E-08 2.1E-12 102.3 15.9 229 246-497 193-447 (466)
173 PRK10054 putative transporter; 98.8 1.7E-07 3.6E-12 98.7 17.4 141 349-499 246-386 (395)
174 TIGR00792 gph sugar (Glycoside 98.8 7.2E-08 1.6E-12 102.2 14.7 170 319-501 16-198 (437)
175 PF01306 LacY_symp: LacY proto 98.8 9.7E-08 2.1E-12 99.8 15.1 146 347-502 259-405 (412)
176 TIGR00896 CynX cyanate transpo 98.8 1.3E-07 2.9E-12 97.5 15.9 138 317-475 212-351 (355)
177 PRK11102 bicyclomycin/multidru 98.8 4.2E-07 9E-12 94.3 19.4 133 317-465 209-342 (377)
178 KOG2533 Permease of the major 98.8 7.8E-08 1.7E-12 103.4 14.1 152 340-502 75-232 (495)
179 TIGR02718 sider_RhtX_FptX side 98.8 2.1E-07 4.6E-12 97.4 16.9 178 306-500 6-187 (390)
180 KOG2504 Monocarboxylate transp 98.8 7.7E-08 1.7E-12 104.2 13.7 161 318-498 62-222 (509)
181 PRK10133 L-fucose transporter; 98.8 4E-07 8.7E-12 97.3 18.9 154 318-493 274-429 (438)
182 PRK11646 multidrug resistance 98.8 4E-07 8.6E-12 96.0 18.5 133 321-473 227-360 (400)
183 TIGR00711 efflux_EmrB drug res 98.8 2.7E-07 5.9E-12 99.1 17.5 142 317-473 270-411 (485)
184 PF07690 MFS_1: Major Facilita 98.7 1.2E-07 2.6E-12 96.7 14.0 131 318-463 222-352 (352)
185 TIGR01301 GPH_sucrose GPH fami 98.7 6E-07 1.3E-11 96.4 19.7 252 250-502 199-476 (477)
186 PRK11195 lysophospholipid tran 98.7 5E-07 1.1E-11 95.0 18.4 155 320-495 223-378 (393)
187 PRK11043 putative transporter; 98.7 9.8E-07 2.1E-11 92.6 19.8 140 318-473 219-358 (401)
188 PRK14995 methyl viologen resis 98.7 6.7E-07 1.4E-11 97.0 18.2 140 317-472 274-413 (495)
189 PF00083 Sugar_tr: Sugar (and 98.7 3.2E-10 6.9E-15 120.9 -8.1 142 348-500 47-194 (451)
190 TIGR00885 fucP L-fucose:H+ sym 98.6 1.5E-06 3.3E-11 92.0 18.9 134 319-473 249-382 (410)
191 KOG2504 Monocarboxylate transp 98.6 5.6E-08 1.2E-12 105.3 8.0 171 302-492 298-471 (509)
192 PRK09669 putative symporter Ya 98.6 3.8E-07 8.2E-12 97.4 13.8 169 319-500 26-207 (444)
193 TIGR00886 2A0108 nitrite extru 98.6 8.4E-07 1.8E-11 91.4 14.1 125 318-458 241-365 (366)
194 KOG4686 Predicted sugar transp 98.6 6.6E-07 1.4E-11 87.4 12.1 137 318-474 280-416 (459)
195 KOG2533 Permease of the major 98.5 2.6E-07 5.7E-12 99.4 9.4 216 246-480 204-439 (495)
196 KOG0252 Inorganic phosphate tr 98.5 3.4E-07 7.4E-12 95.0 9.3 154 347-504 84-252 (538)
197 COG0738 FucP Fucose permease [ 98.5 5.5E-06 1.2E-10 85.2 18.0 166 320-502 31-216 (422)
198 PRK10429 melibiose:sodium symp 98.5 2E-06 4.3E-11 92.8 15.5 170 318-500 22-204 (473)
199 TIGR00788 fbt folate/biopterin 98.5 1.3E-06 2.8E-11 94.2 13.7 174 305-501 30-212 (468)
200 COG0738 FucP Fucose permease [ 98.5 4.6E-06 1E-10 85.7 16.5 177 290-492 228-404 (422)
201 KOG2816 Predicted transporter 98.4 6.3E-06 1.4E-10 88.2 16.3 137 356-505 71-207 (463)
202 PF13347 MFS_2: MFS/sugar tran 98.4 1E-06 2.3E-11 93.6 10.0 169 320-499 19-200 (428)
203 PRK11462 putative transporter; 98.4 7.1E-06 1.5E-10 88.3 16.4 169 319-500 26-207 (460)
204 PF06813 Nodulin-like: Nodulin 98.4 7.2E-06 1.6E-10 80.5 14.7 140 317-472 17-157 (250)
205 KOG0253 Synaptic vesicle trans 98.4 6E-06 1.3E-10 83.7 14.2 141 347-500 113-253 (528)
206 PRK11652 emrD multidrug resist 98.4 1.8E-05 3.9E-10 82.8 18.7 138 318-472 223-360 (394)
207 COG2807 CynX Cyanate permease 98.4 8.8E-06 1.9E-10 82.6 15.2 168 307-495 213-383 (395)
208 TIGR00889 2A0110 nucleoside tr 98.4 7.1E-06 1.5E-10 87.1 15.3 69 318-395 18-87 (418)
209 TIGR00788 fbt folate/biopterin 98.3 2.5E-06 5.3E-11 92.0 9.2 132 341-474 283-415 (468)
210 PRK15403 multidrug efflux syst 98.2 0.00011 2.5E-09 77.7 20.5 156 317-489 233-389 (413)
211 PRK09848 glucuronide transport 98.2 4.1E-05 9E-10 81.8 16.2 128 319-458 25-158 (448)
212 KOG1330 Sugar transporter/spin 98.2 2.5E-05 5.4E-10 81.6 13.4 218 247-476 187-417 (493)
213 PF05631 DUF791: Protein of un 98.2 0.00014 3E-09 74.3 18.3 146 347-503 69-222 (354)
214 TIGR00926 2A1704 Peptide:H+ sy 98.1 8.9E-05 1.9E-09 82.8 17.8 166 318-494 3-179 (654)
215 PF03825 Nuc_H_symport: Nucleo 98.0 7.3E-05 1.6E-09 78.9 14.1 126 318-465 18-144 (400)
216 COG2211 MelB Na+/melibiose sym 98.0 0.00011 2.3E-09 78.2 14.6 170 318-500 28-210 (467)
217 TIGR00924 yjdL_sub1_fam amino 98.0 0.00018 3.8E-09 77.8 16.5 147 351-498 316-469 (475)
218 KOG2325 Predicted transporter/ 98.0 4.7E-05 1E-09 81.0 11.5 188 300-502 33-234 (488)
219 PF01306 LacY_symp: LacY proto 97.9 5.9E-05 1.3E-09 79.1 11.1 160 318-497 23-188 (412)
220 KOG2563 Permease of the major 97.9 8.8E-05 1.9E-09 77.4 11.9 154 347-506 301-459 (480)
221 COG2807 CynX Cyanate permease 97.9 0.00041 9E-09 70.7 15.7 153 320-494 30-183 (395)
222 PF11700 ATG22: Vacuole efflux 97.9 0.00042 9.2E-09 74.8 16.5 148 347-502 70-252 (477)
223 KOG3762 Predicted transporter 97.9 2.7E-05 5.9E-10 82.6 6.8 134 351-494 410-544 (618)
224 PRK10207 dipeptide/tripeptide 97.8 0.00036 7.7E-09 75.8 15.4 146 351-497 313-476 (489)
225 KOG2563 Permease of the major 97.8 0.00024 5.2E-09 74.2 13.1 125 347-473 79-203 (480)
226 PRK09584 tppB putative tripept 97.8 0.00015 3.3E-09 78.8 11.7 146 351-497 320-479 (500)
227 PF03209 PUCC: PUCC protein; 97.8 0.0032 7E-08 65.5 20.0 165 287-472 197-363 (403)
228 PF06609 TRI12: Fungal trichot 97.6 0.0045 9.7E-08 68.2 19.4 114 349-470 351-465 (599)
229 KOG3764 Vesicular amine transp 97.6 0.00023 4.9E-09 73.2 8.6 141 348-495 307-452 (464)
230 PF12832 MFS_1_like: MFS_1 lik 97.5 0.00067 1.5E-08 54.1 8.8 62 315-386 13-74 (77)
231 TIGR00805 oat sodium-independe 97.4 0.0059 1.3E-07 68.5 17.8 70 314-392 342-414 (633)
232 COG0477 ProP Permeases of the 97.4 0.0051 1.1E-07 59.7 15.3 131 348-486 40-174 (338)
233 PTZ00207 hypothetical protein; 97.4 0.0023 4.9E-08 70.7 13.7 182 301-502 353-557 (591)
234 PF03209 PUCC: PUCC protein; 97.3 0.003 6.5E-08 65.7 12.7 137 340-478 9-157 (403)
235 PF03092 BT1: BT1 family; Int 97.3 0.0025 5.5E-08 68.0 12.5 152 340-500 19-178 (433)
236 PF05978 UNC-93: Ion channel r 97.3 0.0067 1.5E-07 55.2 13.2 143 311-468 5-147 (156)
237 KOG3626 Organic anion transpor 97.2 0.0082 1.8E-07 67.0 15.3 81 302-390 392-474 (735)
238 KOG2816 Predicted transporter 97.0 0.016 3.4E-07 62.3 15.4 203 250-472 180-392 (463)
239 PRK15462 dipeptide/tripeptide 97.0 0.025 5.3E-07 61.4 16.2 119 350-469 311-437 (493)
240 TIGR00769 AAA ADP/ATP carrier 96.9 0.034 7.4E-07 59.8 17.0 111 360-471 57-190 (472)
241 PF01770 Folate_carrier: Reduc 96.9 0.059 1.3E-06 56.7 17.6 180 300-500 4-184 (412)
242 KOG0637 Sucrose transporter an 96.7 0.0012 2.5E-08 69.3 3.2 155 301-467 32-200 (498)
243 PF03092 BT1: BT1 family; Int 96.6 0.0041 8.9E-08 66.4 7.1 126 348-474 256-382 (433)
244 PF03137 OATP: Organic Anion T 96.2 0.0012 2.7E-08 72.3 0.0 165 301-474 304-516 (539)
245 PF03137 OATP: Organic Anion T 96.0 0.0012 2.6E-08 72.4 -1.1 130 340-470 32-201 (539)
246 PF06963 FPN1: Ferroportin1 (F 96.0 0.29 6.4E-06 52.1 16.8 135 320-465 276-411 (432)
247 PRK03612 spermidine synthase; 96.0 0.26 5.7E-06 53.9 16.7 50 445-494 144-194 (521)
248 COG2270 Permeases of the major 95.9 0.082 1.8E-06 55.3 11.8 170 320-501 33-224 (438)
249 PF06779 DUF1228: Protein of u 95.9 0.063 1.4E-06 43.5 8.5 73 318-400 8-80 (85)
250 KOG2615 Permease of the major 95.9 0.024 5.2E-07 58.4 7.5 123 340-473 291-415 (451)
251 COG3104 PTR2 Dipeptide/tripept 95.8 0.12 2.6E-06 55.2 12.7 149 350-499 327-489 (498)
252 KOG1237 H+/oligopeptide sympor 95.8 0.38 8.3E-06 53.1 17.0 188 296-493 32-241 (571)
253 PF00854 PTR2: POT family; In 95.7 0.036 7.9E-07 57.7 8.6 118 378-496 2-122 (372)
254 KOG3098 Uncharacterized conser 95.7 0.18 3.9E-06 53.9 13.7 128 342-470 274-412 (461)
255 TIGR01272 gluP glucose/galacto 95.4 0.055 1.2E-06 55.1 8.0 89 414-502 14-119 (310)
256 KOG3626 Organic anion transpor 95.3 0.11 2.4E-06 58.3 10.6 162 340-503 126-348 (735)
257 KOG2325 Predicted transporter/ 94.9 0.043 9.3E-07 58.8 5.7 60 433-492 411-470 (488)
258 PF03219 TLC: TLC ATP/ADP tran 94.8 1.9 4.1E-05 46.8 18.0 113 359-471 71-205 (491)
259 KOG3574 Acetyl-CoA transporter 93.7 0.34 7.4E-06 50.1 9.0 81 300-396 30-118 (510)
260 KOG4332 Predicted sugar transp 93.5 0.11 2.5E-06 51.1 4.9 32 361-392 86-117 (454)
261 PF06963 FPN1: Ferroportin1 (F 93.3 3.4 7.3E-05 44.1 16.2 146 350-496 41-199 (432)
262 KOG4686 Predicted sugar transp 93.2 0.016 3.6E-07 57.3 -1.3 117 350-473 82-199 (459)
263 KOG3762 Predicted transporter 92.7 0.1 2.2E-06 56.2 3.6 70 317-396 26-96 (618)
264 KOG3098 Uncharacterized conser 92.6 2.1 4.5E-05 46.0 13.4 112 347-469 50-161 (461)
265 COG3202 ATP/ADP translocase [E 92.1 4.9 0.00011 43.1 15.2 113 359-471 74-209 (509)
266 PF07672 MFS_Mycoplasma: Mycop 90.3 11 0.00024 37.2 14.7 35 353-387 147-181 (267)
267 PF02487 CLN3: CLN3 protein; 89.8 7.2 0.00016 41.1 13.8 56 416-471 341-396 (402)
268 PF03219 TLC: TLC ATP/ADP tran 89.0 28 0.0006 37.9 18.1 39 353-391 325-363 (491)
269 KOG1479 Nucleoside transporter 87.4 22 0.00047 37.5 15.3 16 317-332 33-48 (406)
270 PF02487 CLN3: CLN3 protein; 86.6 3.6 7.8E-05 43.4 9.2 128 355-498 67-196 (402)
271 TIGR00939 2a57 Equilibrative N 85.2 11 0.00024 40.4 12.3 117 348-466 308-428 (437)
272 PF01770 Folate_carrier: Reduc 84.1 6.3 0.00014 41.6 9.6 76 299-381 244-319 (412)
273 KOG4332 Predicted sugar transp 82.7 11 0.00024 37.6 9.8 136 301-452 249-386 (454)
274 TIGR00939 2a57 Equilibrative N 81.3 21 0.00045 38.2 12.5 31 355-385 53-83 (437)
275 PF05297 Herpes_LMP1: Herpesvi 80.9 0.5 1.1E-05 46.3 0.0 17 486-502 174-190 (381)
276 KOG0637 Sucrose transporter an 80.6 4.2 9.1E-05 43.3 6.6 130 349-478 334-476 (498)
277 TIGR00769 AAA ADP/ATP carrier 79.3 99 0.0021 33.5 19.8 37 353-389 309-345 (472)
278 PRK10263 DNA translocase FtsK; 78.7 25 0.00054 42.3 12.6 20 356-375 61-80 (1355)
279 TIGR00806 rfc RFC reduced fola 78.2 2.1 4.5E-05 46.2 3.6 140 299-457 259-400 (511)
280 PF13000 Acatn: Acetyl-coenzym 76.7 15 0.00032 39.8 9.3 64 437-500 145-224 (544)
281 COG1230 CzcD Co/Zn/Cd efflux s 76.1 65 0.0014 32.5 13.3 34 442-478 154-187 (296)
282 PF02990 EMP70: Endomembrane p 74.3 33 0.00072 37.6 11.8 25 352-376 302-326 (521)
283 KOG3810 Micronutrient transpor 72.7 14 0.00031 38.1 7.7 123 366-501 61-186 (433)
284 PF11947 DUF3464: Protein of u 71.7 15 0.00034 33.1 6.9 89 369-461 56-145 (153)
285 COG4262 Predicted spermidine s 69.3 66 0.0014 33.4 11.4 42 454-495 147-189 (508)
286 KOG3574 Acetyl-CoA transporter 68.6 29 0.00062 36.5 8.8 43 432-474 391-433 (510)
287 COG3202 ATP/ADP translocase [E 67.9 1.6E+02 0.0035 31.9 14.6 39 355-393 329-368 (509)
288 KOG3810 Micronutrient transpor 61.6 19 0.00042 37.2 6.1 72 299-378 231-302 (433)
289 KOG1479 Nucleoside transporter 61.2 71 0.0015 33.8 10.4 115 347-464 282-397 (406)
290 COG5336 Uncharacterized protei 60.9 38 0.00083 28.6 6.6 54 440-493 36-91 (116)
291 PF05631 DUF791: Protein of un 54.1 90 0.0019 32.4 9.6 109 249-373 196-304 (354)
292 KOG2601 Iron transporter [Inor 52.1 2.1E+02 0.0046 30.2 11.7 35 455-489 184-218 (503)
293 TIGR00880 2_A_01_02 Multidrug 48.5 1.5E+02 0.0033 24.3 9.3 38 349-386 89-126 (141)
294 COG2274 SunT ABC-type bacterio 47.2 3.3E+02 0.0071 31.2 13.6 25 350-374 160-184 (709)
295 COG5336 Uncharacterized protei 46.6 58 0.0013 27.6 5.5 29 360-388 55-84 (116)
296 PF04341 DUF485: Protein of un 46.4 71 0.0015 26.1 6.1 41 289-331 5-45 (91)
297 PF06027 DUF914: Eukaryotic pr 43.1 2.1E+02 0.0046 29.4 10.4 19 357-375 177-195 (334)
298 TIGR00927 2A1904 K+-dependent 41.8 47 0.001 38.7 5.7 50 340-392 962-1011(1096)
299 KOG1277 Endosomal membrane pro 40.1 1.3E+02 0.0028 32.2 8.1 14 32-45 32-45 (593)
300 KOG1278 Endosomal membrane pro 37.4 29 0.00063 37.7 3.1 16 358-373 370-385 (628)
301 KOG3097 Predicted membrane pro 36.7 4.9E+02 0.011 27.1 11.4 31 358-388 69-99 (390)
302 PF05313 Pox_P21: Poxvirus P21 35.9 1.6E+02 0.0034 27.4 7.1 50 439-495 110-159 (189)
303 PF06123 CreD: Inner membrane 35.8 2.6E+02 0.0057 29.9 9.9 24 362-385 306-329 (430)
304 PF12670 DUF3792: Protein of u 33.9 3E+02 0.0065 23.4 13.2 31 357-387 44-74 (116)
305 TIGR01667 YCCS_YHJK integral m 33.1 1.7E+02 0.0038 33.4 8.6 29 367-395 43-75 (701)
306 TIGR01666 YCCS hypothetical me 32.6 3E+02 0.0065 31.5 10.3 27 368-394 44-74 (704)
307 PF01733 Nucleoside_tran: Nucl 30.3 14 0.0003 37.4 -0.6 113 352-465 187-303 (309)
308 PF12832 MFS_1_like: MFS_1 lik 29.6 2.5E+02 0.0053 22.0 6.6 40 444-483 33-72 (77)
309 PF05297 Herpes_LMP1: Herpesvi 29.3 18 0.00039 35.8 0.0 17 478-494 170-186 (381)
310 KOG2887 Membrane protein invol 28.6 4.8E+02 0.01 24.1 9.0 40 455-494 116-155 (175)
311 PRK11598 putative metal depend 28.3 7.3E+02 0.016 27.4 12.2 29 362-390 60-88 (545)
312 PRK11715 inner membrane protei 28.2 4.1E+02 0.0088 28.5 9.8 22 362-383 312-333 (436)
313 PF03547 Mem_trans: Membrane t 27.6 1.6E+02 0.0034 30.5 6.8 19 357-375 5-23 (385)
314 KOG3533 Inositol 1,4,5-trispho 25.5 1.4E+03 0.03 28.5 16.2 32 348-379 2286-2317(2706)
315 PF04281 Tom22: Mitochondrial 25.1 1.9E+02 0.004 25.8 5.6 23 436-458 61-83 (137)
316 PF06800 Sugar_transport: Suga 24.6 7.1E+02 0.015 24.8 15.0 33 472-504 218-250 (269)
317 COG5102 SFT2 Membrane protein 24.5 3.9E+02 0.0085 24.5 7.5 18 477-494 160-177 (201)
318 PF06570 DUF1129: Protein of u 24.0 5.3E+02 0.011 24.3 9.0 47 446-495 150-196 (206)
319 COG1079 Uncharacterized ABC-ty 23.6 7.9E+02 0.017 25.0 10.4 105 352-468 12-116 (304)
320 COG0733 Na+-dependent transpor 23.6 8.2E+02 0.018 26.2 10.9 26 306-331 219-244 (439)
321 COG0534 NorM Na+-driven multid 22.7 9.5E+02 0.021 25.6 17.8 64 301-377 24-87 (455)
322 KOG3880 Predicted small molecu 22.3 82 0.0018 32.3 3.1 125 357-498 72-200 (409)
323 PF10183 ESSS: ESSS subunit of 22.0 1.1E+02 0.0023 25.9 3.3 35 470-504 54-88 (105)
324 PF00873 ACR_tran: AcrB/AcrD/A 21.7 6.6E+02 0.014 30.1 11.2 21 341-362 379-399 (1021)
325 PF13536 EmrE: Multidrug resis 21.6 4.7E+02 0.01 21.7 7.7 17 372-388 84-100 (113)
326 PF12273 RCR: Chitin synthesis 21.4 35 0.00076 29.8 0.3 13 477-489 2-14 (130)
327 COG3086 RseC Positive regulato 20.7 5.6E+02 0.012 23.0 7.6 42 340-382 66-107 (150)
328 TIGR02230 ATPase_gene1 F0F1-AT 20.6 5.1E+02 0.011 21.7 7.5 29 361-389 57-85 (100)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=3e-24 Score=226.64 Aligned_cols=261 Identities=25% Similarity=0.393 Sum_probs=211.9
Q ss_pred EEec-CCCcchHHHHhhhccCCCCCCCchhHHHhhhhhhhhhhhhhhhcCCCCCCCCCCCcccccCcccHHHHh-ccchh
Q 009862 223 YLHQ-EGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALL-EAGVK 300 (523)
Q Consensus 223 yL~~-~G~~~ear~~l~~l~g~~~~~~~~~~~a~~l~~~~~l~~~~~l~E~~~~~~~~~~~~~~~~~~~~~~L~-~~~~~ 300 (523)
||+. +|+.+||+++++.++|.++....... .....++. +....+..++.+++ ++.+|
T Consensus 210 ~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~------------~~~e~~~~---------~~~~~~~~sl~~~~~~~~lR 268 (485)
T KOG0569|consen 210 YLLIKKGDEEEARKALKFYRGKEDVEAEIEE------------MLREIEEE---------ELEKKKQISLRQLLKNPTLR 268 (485)
T ss_pred hHHHHcCCHHHHHHHHHHHhCCCcchhHHHH------------HHHHHHHh---------ccccccCCcHHHHhcCcchh
Confidence 6777 89999999999999985432221100 00001110 01111333455555 45788
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHH
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLL 380 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ll 380 (523)
+.+++++.+.++++++|.+.+.+|...++++.|+ +...+.+.+...++..++..+++.+++||+|||+++
T Consensus 269 ~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~----------~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLl 338 (485)
T KOG0569|consen 269 RPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGF----------TPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLL 338 (485)
T ss_pred HHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHH
Confidence 9999999999999999999999999999999877 446778888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHH
Q 009862 381 LTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDI 460 (523)
Q Consensus 381 l~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~i 460 (523)
++++.++.++.+++.+.............+..+.+++++.+.++.|.+|++|.+.+|+||++.|+.+.++..++.|+..+
T Consensus 339 l~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~f 418 (485)
T KOG0569|consen 339 LISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNF 418 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHH
Confidence 99999999888887766554411112333345677788889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCCCCCHHHHHHHHhcc
Q 009862 461 IVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVG 515 (523)
Q Consensus 461 ig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~le~i~~~~~~~ 515 (523)
+....++.+.+.+|- ..|+++.+.+++.+++.++++||||+|+..|+.+.++++
T Consensus 419 iv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 419 IVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 999999999999997 789999999999999999999999999999999998877
No 2
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.84 E-value=2.6e-19 Score=194.70 Aligned_cols=268 Identities=30% Similarity=0.562 Sum_probs=209.2
Q ss_pred eeEEEecCCCcchHHHHhhhccCCCCCCCchhHHHhhhhhhhhhhhhhhhcCCCCCCCCCCCcccccCcccHHHHhccch
Q 009862 220 KRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGV 299 (523)
Q Consensus 220 ~~iyL~~~G~~~ear~~l~~l~g~~~~~~~~~~~a~~l~~~~~l~~~~~l~E~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 299 (523)
.+-||.++|+.+++++++.++++.+. .+.+....... .....+... ......+..++++..
T Consensus 232 sp~~L~~~g~~~~a~~~l~~l~g~~~-~~~~~~~~~~~--------~~~~~~~~~----------~~~~~~~~~l~~~~~ 292 (513)
T KOG0254|consen 232 SPRWLIEKGRLEEAKRSLKRLRGLSP-EDVEVELELLK--------IKLLVEAEV----------AEGKASWGELFSPKV 292 (513)
T ss_pred ChHHHHHcCChHHHHHHHHHHhCCCC-cchHHHHHHHH--------HHHHHhhhc----------ccccccHHHhcCcch
Confidence 35578889999999999999997441 11111111100 001111100 011114677777778
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHH
Q 009862 300 KRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKL 379 (523)
Q Consensus 300 ~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~l 379 (523)
++++++++.+..++|++|++.+.+|.+++++..|.. . .. ...+.+..+..+++.+++.++.||+|||++
T Consensus 293 ~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~---------~-~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~l 361 (513)
T KOG0254|consen 293 RKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLK---------S-DT-FLASIILGVVNFLGTLVATYLVDRFGRRKL 361 (513)
T ss_pred HHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCC---------C-ch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 999999999999999999999999999999987662 2 11 566677788888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc---chhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHH
Q 009862 380 LLTTIPVLIVSLIILVISETLQLI---SPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYW 456 (523)
Q Consensus 380 ll~~~~l~~i~~l~l~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~ 456 (523)
++.+.+.+.+++++++........ ......+..+...+++..++..+.++++|.+.+|+||.+.|+++.+++....|
T Consensus 362 ll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~ 441 (513)
T KOG0254|consen 362 LLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNW 441 (513)
T ss_pred HHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHH
Confidence 999999999999988876655411 13344567777788888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHH-HhheeccCCCCCCHHHHHHHHhcccc
Q 009862 457 ICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWV-FVFLRVPETKGMPLEVITEFFAVGAR 517 (523)
Q Consensus 457 lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v-~~~~~lpEtk~~~le~i~~~~~~~~~ 517 (523)
+...+....++.+....+....|.++..++.+..+ ++++++||||++++|++++.+..+..
T Consensus 442 ~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~~~ 503 (513)
T KOG0254|consen 442 LWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEGIK 503 (513)
T ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcCCc
Confidence 99999988888888776655678888888888887 89999999999999999998877643
No 3
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.77 E-value=7e-18 Score=168.00 Aligned_cols=260 Identities=15% Similarity=0.178 Sum_probs=174.3
Q ss_pred EEecCCCcchHHHHhhhccCCCCCCCchhHHHhhhhhhhhhhhhhhhcCCC-CCCCCCCCcccccCcccHHHHhccchhh
Q 009862 223 YLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHP-VGPAMVHPSETASKGPSWAALLEAGVKR 301 (523)
Q Consensus 223 yL~~~G~~~ear~~l~~l~g~~~~~~~~~~~a~~l~~~~~l~~~~~l~E~~-~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 301 (523)
|.+.+|++++|.+.+.++...|... ...+.+. .......+|.. .-...+.. ..++.......++.|..|+
T Consensus 256 f~~~~G~~~kAletL~kiArmNg~q----lplgvl~----~s~~~~~e~e~~~~~~~~~~-a~ke~rg~~~nLlsp~lrk 326 (528)
T KOG0253|consen 256 FYLAKGDDYKALETLHKIARMNGKQ----LPLGVLE----SSAIDRQEQEESDLDDSKSS-AAKEVRGGTTNLLSPKLRK 326 (528)
T ss_pred hhhhcCChHHHHHHHHHHHHhcCCC----CCcceee----eehhhhhhhhhhchhhhhhc-cccccccchHhhcChHHHH
Confidence 5566789999999999986444311 1111110 00111111111 10011111 1112233567899999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhchHHHHHhcC---chh----hhhc----cCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009862 302 ALLVGVGIQILQQFSGINGVLYYTPQILEQAG---VEV----LLSN----LGISSESASFLISAFTTFLMLPCIGVAMKL 370 (523)
Q Consensus 302 ~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G---~~~----~~~~----lgls~~~~~~l~~~i~~l~~lig~~l~g~L 370 (523)
..++.+.+++...+. ||+.......+++.-. ... ...+ -..+. ...+.-..+..+..++|.++.+++
T Consensus 327 ttlllw~iwfgnafs-yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~-~~dYrdllitslaefPGlLIt~~i 404 (528)
T KOG0253|consen 327 TTLLLWRIWFGNAFS-YYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSV-AKDYRDLLITSLAEFPGLLITGVI 404 (528)
T ss_pred HHHHHHHHHHhhHHH-HHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccc-hhHHHHHHHHHHhhCCchhHHHHH
Confidence 999999998888776 6666666666554421 000 0000 11122 234555667889999999999999
Q ss_pred HHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHH
Q 009862 371 MDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAI 450 (523)
Q Consensus 371 sDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi 450 (523)
+||+|||+.|..++++++++.+++..+..-. ...++.+..-+|..+...+.|+|..|+||+.+|+++.|.
T Consensus 405 verlGRKkTMal~l~~f~iflfll~~c~~rn----------~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGt 474 (528)
T KOG0253|consen 405 VERLGRKKTMALSLILFGIFLFLLTTCKTRN----------AYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGT 474 (528)
T ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHhcCcc----------hhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhh
Confidence 9999999999999999999988887655433 223333333344445556678999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCCCCCH
Q 009862 451 CAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPL 505 (523)
Q Consensus 451 ~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~l 505 (523)
|+...++|+++.|.+. +........+.+++.++++++++.+.++--|||+|.+
T Consensus 475 cSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 475 CSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred hhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 9999999999999998 5555555667888999999998888887779999864
No 4
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.77 E-value=1.4e-17 Score=186.22 Aligned_cols=145 Identities=16% Similarity=0.243 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccc
Q 009862 349 SFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYG 428 (523)
Q Consensus 349 ~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 428 (523)
.++.+++..++.+++.+++++++||+|||++++++.++.+++++++.+..... .++++.++..++..+..
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~----------~ll~~~~l~g~~~~~~~ 666 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSES----------AMIALLCLFGGLSIAAW 666 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHH----------HHHHHHHHHHHHHHHHH
Confidence 34556677889999999999999999999999999888888877766443222 12222223333333445
Q ss_pred cccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCCCCCH
Q 009862 429 PIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPL 505 (523)
Q Consensus 429 ~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~l 505 (523)
++.+++++|++|++.|++++|+++++.++|++++|++++.+... +...+|++++++.++++++.+ ++|||+++.+
T Consensus 667 ~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~-~LPET~~~~l 741 (742)
T TIGR01299 667 NALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLAL-KLPDTRGQVL 741 (742)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH-hCCCCccccc
Confidence 56668889999999999999999999999999999999988764 344566666666666555444 5699998754
No 5
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.77 E-value=1.5e-21 Score=208.11 Aligned_cols=255 Identities=33% Similarity=0.545 Sum_probs=186.6
Q ss_pred eEEEecCCCcchHHHHhhhccCCCCCCCchhHHHhhhhhhhhhhhhhhhcCCCCCCCCCCC-cccccCcccHHHHhccc-
Q 009862 221 RIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHP-SETASKGPSWAALLEAG- 298 (523)
Q Consensus 221 ~iyL~~~G~~~ear~~l~~l~g~~~~~~~~~~~a~~l~~~~~l~~~~~l~E~~~~~~~~~~-~~~~~~~~~~~~L~~~~- 298 (523)
+-||..+||.+||++++.++++.+...+ + ..+..++ ++..+.+..++.+++++
T Consensus 195 P~wL~~~~~~~~A~~~l~~~~~~~~~~~-~------------------------~~~~~~~~~~~~~~~~~~~~l~~~~~ 249 (451)
T PF00083_consen 195 PRWLLSKGRDEEAEKVLRKLRGKEIEDE-E------------------------IEEIKAEKKESQESKASWRDLFRNKK 249 (451)
T ss_pred cceecccccccccccccccccccccccc-c------------------------ccccccccccccccceeeeecccccc
Confidence 6799999999999999999765321111 0 0000000 01111113566666653
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChH
Q 009862 299 VKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRK 378 (523)
Q Consensus 299 ~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ 378 (523)
+++++++.+.+.+++++++++.+.+|.|.++++.+. +. . ...+.+..+..+++.+++.+++||+|||+
T Consensus 250 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~---------~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~ 317 (451)
T PF00083_consen 250 YRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGI---------SN-S--FLATLILGLVNFLGTLLAIFLIDRFGRRK 317 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc---------cc-c--ccccccccccccccccccccccccccccc
Confidence 577888888888888888888899999999888655 12 1 34455566777788888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHH
Q 009862 379 LLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWIC 458 (523)
Q Consensus 379 lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG 458 (523)
+++.+.++++++.+.+..................+.+..++..++..+++++.+.+++|+||++.|+++++++....+++
T Consensus 318 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~ 397 (451)
T PF00083_consen 318 LLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIG 397 (451)
T ss_pred ccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccc
Confidence 99999888887777664111111011001122334444455567777888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCCCCCHHHHHHHH
Q 009862 459 DIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFF 512 (523)
Q Consensus 459 ~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~le~i~~~~ 512 (523)
+++++.+.+.+.+..+....+.++++++++..+++++++||||+++++|++++|
T Consensus 398 ~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 398 GFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEMF 451 (451)
T ss_pred ccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhhC
Confidence 999999999998888756788888999999999999999999999999999875
No 6
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.77 E-value=2.4e-17 Score=178.70 Aligned_cols=213 Identities=21% Similarity=0.222 Sum_probs=136.7
Q ss_pred cHHHHhccc----hhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccC-CCch-hhHHHHHHHHHHHHHHH
Q 009862 290 SWAALLEAG----VKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLG-ISSE-SASFLISAFTTFLMLPC 363 (523)
Q Consensus 290 ~~~~L~~~~----~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lg-ls~~-~~~~l~~~i~~l~~lig 363 (523)
.+++++++. +++.++..+...++.. ..+|++..|.|.++++.|.+....... .... ........+..++.+++
T Consensus 273 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g 351 (502)
T TIGR00887 273 SWSDFFTHFFKWRHGKHLLGTAGSWFLLD-IAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPG 351 (502)
T ss_pred hHHHHHHHHhhhHHHHHHHHHHHHHHHHH-HHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466666422 2233333333333333 346778889999998866521000000 0000 01111233445567788
Q ss_pred HHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcch
Q 009862 364 IGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKV 443 (523)
Q Consensus 364 ~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~ 443 (523)
.+++++++||+|||++++++.++++++++++.+..... . .. ..+...+++..+++.+..++.+.+.+|++|++.
T Consensus 352 ~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~--~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~ 425 (502)
T TIGR00887 352 YWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL--S--TH--GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY 425 (502)
T ss_pred HHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc--c--hh--HHHHHHHHHHHHHhcCCCchhhhhhhccCchhH
Confidence 89999999999999999888877777666555432110 0 00 112222223333455667778888899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hCchhHHHHHHHHHHHHHHHhheeccCCCCCCHHHHHH
Q 009862 444 RGICIAICAMAYWICDIIVTYTLPVMLSS----------IGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITE 510 (523)
Q Consensus 444 Rg~a~gi~~~~~~lG~iig~~l~~~l~~~----------~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~le~i~~ 510 (523)
|+++.|++++++++++++++.+.|++.+. .++...++++++++++..++ ++++|||+++++||++.
T Consensus 426 R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 426 RSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPETKGKSLEELSG 501 (502)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH-heEeccCCCCCHHhhhC
Confidence 99999999999999999999999999874 34445677787777766554 46789999999988764
No 7
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.72 E-value=3.8e-16 Score=167.70 Aligned_cols=196 Identities=27% Similarity=0.491 Sum_probs=148.0
Q ss_pred HHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHH
Q 009862 308 GIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVL 387 (523)
Q Consensus 308 ~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~ 387 (523)
....++++.+++.+.+|.|.++++.|. +. ....+......+..+++.+++++++||+|||++++.+.+++
T Consensus 277 ~~~~~~~~~~~~~~~~~~p~i~~~~g~---------~~-~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~ 346 (479)
T PRK10077 277 MLSVFQQFVGINVVLYYAPEIFKTLGA---------ST-DIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGM 346 (479)
T ss_pred HHHHHHHHhChhHHHHHHHHHHHHcCC---------CC-chHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHH
Confidence 334455566677778889999887554 33 34455566677888999999999999999999999998888
Q ss_pred HHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009862 388 IVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLP 467 (523)
Q Consensus 388 ~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~ 467 (523)
+++.+++....... ......++.++++..++...+.++.+.+++|++|++.|++++|+++...+++.++++.++|
T Consensus 347 ~v~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p 421 (479)
T PRK10077 347 AIGMFSLGTAFYTQ-----APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFP 421 (479)
T ss_pred HHHHHHHHHHHhcC-----cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 88777665432211 0111223334444444555566777888999999999999999999999999999988888
Q ss_pred HHH------HhhCchhHHHHHHHHHHHHHHHhheeccCCCCCCHHHHHHHHhccccc
Q 009862 468 VML------SSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVGARQ 518 (523)
Q Consensus 468 ~l~------~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~le~i~~~~~~~~~~ 518 (523)
.+. +..++...|+++++++++++++.+++.||||+++++++++.++++.|+
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 478 (479)
T PRK10077 422 MMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEPETKK 478 (479)
T ss_pred HHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhhcccC
Confidence 665 467888888888888888888888889999999999999998777654
No 8
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.71 E-value=1.7e-17 Score=169.99 Aligned_cols=314 Identities=18% Similarity=0.188 Sum_probs=207.5
Q ss_pred cccccCcceeeEeeecccCCCCcccCceeeEEEecCCCcchHHHHh-----hhcc-CCCCC-------CCchhH-HHhhh
Q 009862 192 STGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSL-----VSVP-GYDVP-------EEGEYI-QAAAL 257 (523)
Q Consensus 192 ~~gigg~w~l~~~~~~~~~~~~~~~~~~~~iyL~~~G~~~ear~~l-----~~l~-g~~~~-------~~~~~~-~a~~l 257 (523)
..||||.+++.-..++|.+. .+++|.+-......+|-.--+-+++ ..+. ..+.+ .-||.. -.+++
T Consensus 155 GiGIGGDYPlSAtI~SE~an-~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~v 233 (538)
T KOG0252|consen 155 GIGIGGDYPLSATIMSESAN-KKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAV 233 (538)
T ss_pred hccccCCCcchHHHhhhhhh-hccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHH
Confidence 46999999998877766443 3455555555555554433322221 1111 11111 125654 56777
Q ss_pred hhhhhhhhhhhhcCCCCCCCCCCCc-----ccc-cCcc---------------------cHHHHhccchhhHHHHHHHHH
Q 009862 258 VSQPALYSKELMDQHPVGPAMVHPS-----ETA-SKGP---------------------SWAALLEAGVKRALLVGVGIQ 310 (523)
Q Consensus 258 ~~~~~l~~~~~l~E~~~~~~~~~~~-----~~~-~~~~---------------------~~~~L~~~~~~~~~li~~~l~ 310 (523)
..+..+|.|..++|++++.+...++ +.. ++.+ .+..++..++-+.++..+..+
T Consensus 234 pa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~W 313 (538)
T KOG0252|consen 234 PALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTW 313 (538)
T ss_pred HHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 8888899999999998876322211 000 0000 133333333446666666666
Q ss_pred HHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHH
Q 009862 311 ILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVS 390 (523)
Q Consensus 311 ~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~ 390 (523)
++... .+|....+...++...|+....++.. ..-..+.....+..+..+++..+..+++|++|||++.+.+++++++.
T Consensus 314 FllDi-afy~~nL~~s~I~~~ig~~~~~~~~~-~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~ 391 (538)
T KOG0252|consen 314 FLLDI-AFYGQNLFQSVIFSAIGVIPSANTYH-ELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIF 391 (538)
T ss_pred Hhhhh-hhhccccHHHHHHHhhccCCCcchHH-HHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHH
Confidence 66666 47888999999999876622111110 00012333444556677788889999999999999999999999988
Q ss_pred HHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 391 LIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVML 470 (523)
Q Consensus 391 ~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~ 470 (523)
.+.++...+.. . .....+++..+..++...+......++.+|+||+++|+++.|++.+.+.+|++++...+.++.
T Consensus 392 ~~~~~~~y~~~-~----~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t 466 (538)
T KOG0252|consen 392 FFVIAGPYNQL-E----NTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLT 466 (538)
T ss_pred HHHHcCCcccc-c----ccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhh
Confidence 88776554321 1 111233344444555666777777788899999999999999999999999999999999999
Q ss_pred H-----hhCchhHHHHHHHHHHHHHHHhheeccCCCCCCHHHHHHHHhc
Q 009862 471 S-----SIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAV 514 (523)
Q Consensus 471 ~-----~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~le~i~~~~~~ 514 (523)
+ ..+.+.++++++.++++..++.+ ++||||++++|++....+.
T Consensus 467 ~~~yp~~~g~~~v~~i~~~~~~~gi~~T~-l~pEtk~~~leei~~e~~~ 514 (538)
T KOG0252|consen 467 DHNYPPNIGVRNVFIILAGCMLLGILFTL-LIPETKGKSLEEISNEEES 514 (538)
T ss_pred hccCCccccchHHHHHHHHHHHHhHheeE-EeecccccCHHHhcChhhc
Confidence 8 77888899888888877665554 4789999999998655443
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.64 E-value=6e-15 Score=159.56 Aligned_cols=240 Identities=20% Similarity=0.162 Sum_probs=139.9
Q ss_pred CCchhH-HHhhhhhhhhhhhhhhhcCCCCCCCCCCCc---cc----ccCcccHHHHhccchhhHHHHHHHHHHHHHhhhh
Q 009862 247 EEGEYI-QAAALVSQPALYSKELMDQHPVGPAMVHPS---ET----ASKGPSWAALLEAGVKRALLVGVGIQILQQFSGI 318 (523)
Q Consensus 247 ~~~~~~-~a~~l~~~~~l~~~~~l~E~~~~~~~~~~~---~~----~~~~~~~~~L~~~~~~~~~li~~~l~~~~~~~g~ 318 (523)
..||.. ...++..+++++++..++|+|.+.+.+.+. ++ ..+...++.++++ +++.+++.+.+.++.. ..+
T Consensus 189 ~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~ 266 (490)
T PRK10642 189 WGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATK-HWRSLLTCIGLVIATN-VTY 266 (490)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHH-hHHHHHHHHHHHHHHH-HHH
Confidence 346643 333444555677788888887653211100 00 0112245566654 3455554444444333 357
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 398 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~ 398 (523)
+.+..|+|.++++ .+|++. ....+......++.+++.+++|+++||+|||++++++.+++.++.+.+....
T Consensus 267 ~~~~~~~p~~l~~--------~~g~s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 337 (490)
T PRK10642 267 YMLLTYMPSYLSH--------NLHYSE-DHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI 337 (490)
T ss_pred HHHHHHHHHHHHH--------hcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888899999865 234444 3445556667788889999999999999999988877654443332221111
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-chh
Q 009862 399 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG-LAG 477 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G-~~~ 477 (523)
. .. .....++..+++..+.+...+ ....+++|++|++.|++++++.+...++++.++|.+.+++.+..+ |+.
T Consensus 338 ~---~~---~~~~~~~~~~~~g~~~~~~~g-~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~ 410 (490)
T PRK10642 338 N---SN---VIGLIFAGLLMLAVILNCFTG-VMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMM 410 (490)
T ss_pred h---CC---CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchH
Confidence 1 00 011112222222222222222 233556799999999999998777788888999999999887665 455
Q ss_pred HHHHHHHHHHHHHHHhheeccCCCCCCH
Q 009862 478 AFGVYAVVCFISWVFVFLRVPETKGMPL 505 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lpEtk~~~l 505 (523)
++++..++++++.+ ..+++||++++..
T Consensus 411 ~~~~~~~~~~i~~~-~~~~~pes~~~~~ 437 (490)
T PRK10642 411 PAYYLMVVAVIGLI-TGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHHH-HHHHhccccCCCC
Confidence 55555554444444 3445699866433
No 10
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.63 E-value=1.7e-14 Score=153.12 Aligned_cols=196 Identities=35% Similarity=0.641 Sum_probs=148.3
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHH
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLL 380 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ll 380 (523)
+..++..++.++.++.+.+.+.+|.|.++++.|+ +. ....+...+..++.+++.+++++++||+|||+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---------~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 352 (481)
T TIGR00879 283 RRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGV---------ST-DHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL 352 (481)
T ss_pred HHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCC---------Cc-hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 4555555555555565666778888998887554 34 4556667778888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccch--hhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHH
Q 009862 381 LTTIPVLIVSLIILVISETLQLISP--VLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWIC 458 (523)
Q Consensus 381 l~~~~l~~i~~l~l~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG 458 (523)
++++++++++++++.+..... ... ....+..+....++.++++.+..++.++++.|.+|++.|++++++.++..++|
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg 431 (481)
T TIGR00879 353 LIGAAGMAICLFVLGILGASF-VTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLA 431 (481)
T ss_pred HHHHHHHHHHHHHHHHHhhcc-cCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHH
Confidence 888777777666554322111 110 00122334444555566666777888788899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCCCCCHHH
Q 009862 459 DIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEV 507 (523)
Q Consensus 459 ~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~le~ 507 (523)
.++++.+.+.+.+..+|...|+++++++++.+++.+++.||+|++++++
T Consensus 432 ~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 432 NFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLEE 480 (481)
T ss_pred HHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChhh
Confidence 9999999999999999999999999998888888888899999877653
No 11
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.62 E-value=2.6e-14 Score=160.14 Aligned_cols=161 Identities=16% Similarity=0.040 Sum_probs=118.7
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 398 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~ 398 (523)
..+...+|.+..+++ ++. ....++.++..++.+++.+++|+++||+|||+++++++++.+++.++..+..
T Consensus 184 ~~is~ilp~i~~~~g---------ls~-~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~ 253 (742)
T TIGR01299 184 FVVGFVLPSAEKDLC---------IPD-SGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQ 253 (742)
T ss_pred HHHHHHHHHHHHHhC---------CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 345556777766644 444 4556667788899999999999999999999999998888877777666544
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----
Q 009862 399 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI----- 473 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~----- 473 (523)
++. .+++..++.+++..+..++..++++|++|.+.|++.+++..++..+|.++++.+...+...+
T Consensus 254 s~~----------~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~ 323 (742)
T TIGR01299 254 GYG----------FFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQ 323 (742)
T ss_pred hHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhc
Confidence 433 34444455555555556777788999999999999999999999999999998877776543
Q ss_pred --------CchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 474 --------GLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 474 --------G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
+|++.+++.++. ++..++.++++||+
T Consensus 324 ~g~~~~~~gWR~l~~i~~lp-~ll~ll~~~~lPES 357 (742)
T TIGR01299 324 MGSAYQFHSWRVFVIVCAFP-CVFAIGALTFMPES 357 (742)
T ss_pred cccccccccHHHHHHHHHHH-HHHHHHHHHHcCCC
Confidence 466666555444 44445556678998
No 12
>TIGR00898 2A0119 cation transport protein.
Probab=99.55 E-value=7.2e-14 Score=151.35 Aligned_cols=146 Identities=21% Similarity=0.305 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccc
Q 009862 351 LISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPI 430 (523)
Q Consensus 351 l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i 430 (523)
....+..+..+++.++.++++||+|||++++++.++.+++++++.+..... .+..++ ..++..++.....++
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~ 430 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDL-------YFLRTA-LAVLGKFGITSAFQM 430 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCc-------hHHHHH-HHHHHHHHHHHHHHH
Confidence 444566778889999999999999999999998888777776655432211 111122 222222222333345
Q ss_pred cceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCCCCCHHH
Q 009862 431 PNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEV 507 (523)
Q Consensus 431 ~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~le~ 507 (523)
.+++.+|++|++.|++++|+++++.++|++++|.+.+ ....++..+++++++++++++++.+ ++|||+++++++
T Consensus 431 ~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~~~~l~~ 504 (505)
T TIGR00898 431 VYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY--LGEKWLFLPLVLFGGLALLAGILTL-FLPETKGVPLPE 504 (505)
T ss_pred HHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH--HHHHHHhhHHHHHHHHHHHHHHHHH-cCcCCCCCCCCC
Confidence 5678899999999999999999999999999999988 3445556677777777776666554 589999987653
No 13
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.53 E-value=2.4e-13 Score=143.76 Aligned_cols=180 Identities=13% Similarity=0.080 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHH
Q 009862 303 LLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLT 382 (523)
Q Consensus 303 ~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~ 382 (523)
.++.+++.++.+......+.+..|.+.++ ++++. ....+..+++.++..++.++.|+++||+|||+++..
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~---------~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 78 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKD---------LGLSA-TMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAG 78 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhh---------cCCCH-HHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHH
Confidence 33333333334343455666666766555 45555 566677778889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHH
Q 009862 383 TIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIV 462 (523)
Q Consensus 383 ~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig 462 (523)
+.++.+++.++..+..+.. .+++..++.++...+..+....+++|++|++.|++++++.++...+|.+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~----------~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~ 148 (412)
T TIGR02332 79 IMVLWGIASTATMFATGPE----------SLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALG 148 (412)
T ss_pred HHHHHHHHHHHHHHhcCHH----------HHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888877776654433 344445555555555556666677999999999999999999999999999
Q ss_pred HHHHHHHHH------hhCchhHHHHHHHHHHHHHHHhheeccCCCC
Q 009862 463 TYTLPVMLS------SIGLAGAFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 463 ~~l~~~l~~------~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
+.+.+++.+ ..||++.|.+.++..++..++.++++||++.
T Consensus 149 ~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 149 LILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 999998874 3699999999888887777777777888764
No 14
>PRK09952 shikimate transporter; Provisional
Probab=99.53 E-value=6.1e-13 Score=141.88 Aligned_cols=235 Identities=15% Similarity=0.094 Sum_probs=131.4
Q ss_pred Cchh-HHHhhhhhhhhhhhhhhhcCCCCCCCCCCCc-ccccCcccHHHHhccchhhHHHHHHHHHHHHHhhhhhhhhhch
Q 009862 248 EGEY-IQAAALVSQPALYSKELMDQHPVGPAMVHPS-ETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYT 325 (523)
Q Consensus 248 ~~~~-~~a~~l~~~~~l~~~~~l~E~~~~~~~~~~~-~~~~~~~~~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~~~ 325 (523)
.||. +....+...+.++++...+|++++.+.+.+. +...+.+..+.++++ ++.+...+...++..+ +++.+..|.
T Consensus 197 gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~ 273 (438)
T PRK09952 197 GWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRH--PGAFLKIIALRLCELL-TMYIVTAFA 273 (438)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccccccCCHHHHHHHc--hHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 4653 2334444455667777888887643222111 111112223334433 2333333333333333 466778888
Q ss_pred HHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccch
Q 009862 326 PQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISP 405 (523)
Q Consensus 326 p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~ 405 (523)
|.++++ .+|++.. .......+..+..+++.++.|+++||+|||++++++.++.+++.+.+.......
T Consensus 274 ~~y~~~--------~~g~s~~-~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~---- 340 (438)
T PRK09952 274 LNYSTQ--------NLGLPRE-LFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQ---- 340 (438)
T ss_pred HHHHHH--------hcCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcC----
Confidence 988865 3444442 233334455667788889999999999999998877665554443332211100
Q ss_pred hhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHH-HHHHHHHHHHHHHHHhhC--chhHHHHH
Q 009862 406 VLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYW-ICDIIVTYTLPVMLSSIG--LAGAFGVY 482 (523)
Q Consensus 406 ~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~-lG~iig~~l~~~l~~~~G--~~~~f~i~ 482 (523)
... ..+++..++.++......+..+++++|.+|++.|+++.++.+...+ +++.++|.+.+++.+..+ |...+.+.
T Consensus 341 -~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~ 418 (438)
T PRK09952 341 -SIF-WIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYL 418 (438)
T ss_pred -ChH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 011 1111122222222222334455778999999999999999765544 899999999999988653 55555544
Q ss_pred HHHHHHHHHHhheeccCCC
Q 009862 483 AVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 483 ~i~~~i~~v~~~~~lpEtk 501 (523)
++++++.++. .+.++|++
T Consensus 419 ~~~~~i~~v~-~~~~~~~~ 436 (438)
T PRK09952 419 LAGCLISAMT-ALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHH-HHHccccc
Confidence 4444444444 44467654
No 15
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.52 E-value=5.5e-13 Score=141.95 Aligned_cols=180 Identities=14% Similarity=0.111 Sum_probs=131.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHH
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLL 380 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ll 380 (523)
+.++...++.++..+...+.+..+.|.+.+++|. +. ....++.++..++..++.++.|+++||+|||+++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---------s~-~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~ 91 (434)
T PRK11663 22 RHILITMYLGYALFYFTRKSFNAAMPEMLADLGL---------SR-SDIGLLATLFYITYGVSKFVSGIVSDRSNARYFM 91 (434)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCC---------CH-HHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhH
Confidence 3444444444444443345667788988887554 34 5666777788899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHH
Q 009862 381 LTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDI 460 (523)
Q Consensus 381 l~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~i 460 (523)
.++.++.+++.+++.+..++. .+++..++.++..+...+....+++|.+|++.|++++++.+....+|.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~----------~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~ 161 (434)
T PRK11663 92 GIGLIATGIINILFGFSSSLW----------AFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGA 161 (434)
T ss_pred HHHHHHHHHHHHHHHHHhHHH----------HHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 999888888877666544333 2222233333333333445556779999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 461 IVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 461 ig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
+++.+.+.+.+.+||++.|.+.++++++..++..+++||+
T Consensus 162 ~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 162 LIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999888877766655555556654
No 16
>PRK03545 putative arabinose transporter; Provisional
Probab=99.50 E-value=7.4e-13 Score=138.68 Aligned_cols=163 Identities=13% Similarity=0.089 Sum_probs=125.0
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 398 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~ 398 (523)
+......|.+.+++| ++. ....+......++..++.++.|+++||+|||++++.+.++.+++.+.+.+..
T Consensus 26 ~~~~~~~~~l~~~~~---------~s~-~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 95 (390)
T PRK03545 26 FVPVGLLSDIAQSFH---------MQT-AQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAW 95 (390)
T ss_pred HHHHcchHHHHhHcC---------CCH-HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhc
Confidence 334445677777644 444 5666677788888889999999999999999999999888888877776655
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhH
Q 009862 399 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGA 478 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~ 478 (523)
++. .+++..+..++......+....++.+++|.+.|++++|+......+|..+++.+.+.+.+.+||++.
T Consensus 96 ~~~----------~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~ 165 (390)
T PRK03545 96 NFT----------VLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTT 165 (390)
T ss_pred cHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHH
Confidence 443 3333334444444444455556778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhheeccCCC
Q 009862 479 FGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 479 f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
|++.++++++..++.++.+|+.+
T Consensus 166 f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 166 FLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC
Confidence 99998888777666666667643
No 17
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.49 E-value=8.6e-13 Score=136.87 Aligned_cols=168 Identities=17% Similarity=0.156 Sum_probs=128.5
Q ss_pred hhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 009862 316 SGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILV 395 (523)
Q Consensus 316 ~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~ 395 (523)
.+........|.+.+++|. +. ....+..++..++.+++.++.|+++||+|||+.++++.++.+++.+.+.
T Consensus 19 ~~~~~~~~~~p~~~~~~g~---------s~-~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 88 (385)
T TIGR00710 19 LGIDMYLPAFPEIAADLST---------PA-SIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLA 88 (385)
T ss_pred HHHHHhcccHHHHHHHhCC---------CH-HHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 3455666677887777544 44 5667777788899999999999999999999999998888877777665
Q ss_pred HHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 009862 396 ISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGL 475 (523)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~ 475 (523)
...+.. .+++..++.++......+....++.|.+|++.|+++.++.+....+|..+++.+.+.+.+..+|
T Consensus 89 ~~~~~~----------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 158 (385)
T TIGR00710 89 LSNNIE----------TLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSW 158 (385)
T ss_pred HHccHH----------HHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 543332 2333333333333444455557779999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhheeccCCCCC
Q 009862 476 AGAFGVYAVVCFISWVFVFLRVPETKGM 503 (523)
Q Consensus 476 ~~~f~i~~i~~~i~~v~~~~~lpEtk~~ 503 (523)
+..+++.++++++..++.+++.||++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 159 HAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999888888777777777667776543
No 18
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.49 E-value=9.5e-13 Score=138.43 Aligned_cols=162 Identities=12% Similarity=0.138 Sum_probs=124.7
Q ss_pred hhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHh
Q 009862 320 GVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISET 399 (523)
Q Consensus 320 ~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~ 399 (523)
.....+|.+.+++| ++. ....+..++..++..++.++.|+++||+|||++++.+.++.+++.++..+..+
T Consensus 38 ~~~~~l~~~~~~~g---------~s~-~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~ 107 (394)
T PRK10213 38 LPVSLLTPMAQDLG---------ISE-GVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANS 107 (394)
T ss_pred HHHhhHHHHHHHcC---------CCH-HHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHCh
Confidence 44445677776654 444 55566667788889999999999999999999999999998887777665444
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHH
Q 009862 400 LQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAF 479 (523)
Q Consensus 400 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f 479 (523)
+. .+++..++.++......+....++.|++|++.|+.+.++......+|.++++.+.+.+.+.+||++.|
T Consensus 108 ~~----------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f 177 (394)
T PRK10213 108 FS----------LLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVF 177 (394)
T ss_pred HH----------HHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence 33 34444444444444455666677899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhheeccCCC
Q 009862 480 GVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 480 ~i~~i~~~i~~v~~~~~lpEtk 501 (523)
++.+++++++.++....+||++
T Consensus 178 ~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 178 NAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHHHHCCCCC
Confidence 8888777666555555567754
No 19
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.49 E-value=3.4e-13 Score=137.91 Aligned_cols=266 Identities=15% Similarity=0.181 Sum_probs=168.6
Q ss_pred ccCceeeEEEecCCCcchHHHHhh--hccCCCCCCCchhHHHhhhhhhhhhhhhhhhcCCCCCCCC------C----C--
Q 009862 215 KEGGFKRIYLHQEGVPGSRRGSLV--SVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAM------V----H-- 280 (523)
Q Consensus 215 ~~~~~~~iyL~~~G~~~ear~~l~--~l~g~~~~~~~~~~~a~~l~~~~~l~~~~~l~E~~~~~~~------~----~-- 280 (523)
.+|.+-.+|=.+++.-......+. ............++..+++..+++++.....+++|+.... + +
T Consensus 150 eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~ 229 (448)
T COG2271 150 ERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIY 229 (448)
T ss_pred ccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhh
Confidence 367788888888854444444444 2221111344567888888888888887777777653210 0 0
Q ss_pred CcccccC-cccHHHHhccchhhHHHH-HHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHH
Q 009862 281 PSETASK-GPSWAALLEAGVKRALLV-GVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTF 358 (523)
Q Consensus 281 ~~~~~~~-~~~~~~L~~~~~~~~~li-~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l 358 (523)
+++++.. .+.|+.+++.-.+.+.++ .++..++... .-+++..|.|.|+.+ ..|++. ..+.+..+++-.
T Consensus 230 ~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYi-vR~gi~dW~p~YL~e--------~k~~s~-~~a~~a~~lfE~ 299 (448)
T COG2271 230 EEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYV-VRYGINDWGPLYLSE--------VKGFSL-VKANWAISLFEV 299 (448)
T ss_pred hhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHH-HHHHHhhhHHHHHHH--------hcCCCH-HHHHHHHHHHHH
Confidence 1111111 233554444333333333 3444444444 478999999999988 355555 566677779999
Q ss_pred HHHHHHHHHHHHHHhh--CChHHHHHHHHHH-HHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceee
Q 009862 359 LMLPCIGVAMKLMDVA--GRRKLLLTTIPVL-IVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILC 435 (523)
Q Consensus 359 ~~lig~~l~g~LsDr~--GRR~lll~~~~l~-~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~ 435 (523)
++++|.+++||++||+ |||..+.+.+.+. .++++.+... +..+ .....+++...+++..+..-+....+
T Consensus 300 agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~-------~~~~-~~l~~~~l~~iGf~IyGPqmLiGl~a 371 (448)
T COG2271 300 AGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA-------PNGS-YLLDAILLFIIGFLIYGPQMLIGLAA 371 (448)
T ss_pred HhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC-------CCcc-HHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 9999999999999995 7776654433333 3333222211 1111 12233333333444444444445567
Q ss_pred ecccCcchhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheecc
Q 009862 436 AEIFPTKVRGICIAICAMAYWI-CDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 436 aElfP~~~Rg~a~gi~~~~~~l-G~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lp 498 (523)
.|+.|.+.-|++.|+...+..+ |+..+....+++.+.+||.+.|.++.+.++++.++......
T Consensus 372 ~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 372 AEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred hccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999998 99999999999989999999999888888877766655443
No 20
>TIGR00895 2A0115 benzoate transport.
Probab=99.49 E-value=3.9e-13 Score=139.47 Aligned_cols=165 Identities=16% Similarity=0.178 Sum_probs=126.1
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
......++.|.+.+++|. +. ....++..+..++.+++.++.|+++||+|||++++.+.++.+++.+++.+
T Consensus 32 ~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 101 (398)
T TIGR00895 32 DLAAMGFAAPAISAEWGL---------DP-VQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCAL 101 (398)
T ss_pred HHHHHHhhHHHHhhccCC---------CH-HHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 345667778888777544 33 45566677888899999999999999999999999988877777666654
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
..+.. .+++..++.++......+....++.|.+|.+.|++++++......+|.++++.+.+.+.+..+|+
T Consensus 102 ~~~~~----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~ 171 (398)
T TIGR00895 102 ATNVT----------QLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWR 171 (398)
T ss_pred ccchH----------HHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccce
Confidence 33322 23333334444444455666678899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhheeccCCC
Q 009862 477 GAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 477 ~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
..+++.++++++..++.++++||+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 172 SLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred eehhhhhhHHHHHHHHHHHhCCCCC
Confidence 9888887777766666666678764
No 21
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.48 E-value=1.1e-12 Score=137.27 Aligned_cols=180 Identities=13% Similarity=0.107 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHH
Q 009862 303 LLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLT 382 (523)
Q Consensus 303 ~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~ 382 (523)
++.+.++..+++..+.+.....+|.+.++.|. +. ....+..++..++.+++.++.|+++||+|||+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~---------s~-~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~ 73 (392)
T PRK10473 4 FLLCSFALVLLYPAGIDMYLVGLPRIAADLNA---------SE-AQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIP 73 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCC---------CH-HHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHH
Confidence 44445555555555667777888998887554 33 556667778888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHH
Q 009862 383 TIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIV 462 (523)
Q Consensus 383 ~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig 462 (523)
+.++.+++.+++....+.. .+++..++.++......+..+.++.|.+|++.|+++.++.+....++.+++
T Consensus 74 ~~~~~~i~~~~~~~~~~~~----------~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~ 143 (392)
T PRK10473 74 GAALFIIASLLCSLAETSS----------LFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLA 143 (392)
T ss_pred HHHHHHHHHHHHHHhCcHH----------HHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888777776665433322 222223333333333344555677999999999999999999999999999
Q ss_pred HHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCCC
Q 009862 463 TYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 463 ~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
|.+.+.+.+..+|++.+++.++++++..++.++++||++.
T Consensus 144 ~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (392)
T PRK10473 144 PVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRP 183 (392)
T ss_pred HHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 9999888888899999999888888777777777787654
No 22
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.48 E-value=1.4e-12 Score=138.02 Aligned_cols=165 Identities=14% Similarity=0.102 Sum_probs=122.7
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
......-+|.+.++ ++.+. ....+..+++.++..++.++.|+++||+|||++++.+.++.+++.+++.+.
T Consensus 32 ~~~~~p~l~~i~~~---------~~~~~-~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 101 (413)
T PRK15403 32 TDLIQPGIINVVRD---------FNADV-SLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT 101 (413)
T ss_pred HHhhccCHHHHHHH---------hCCCH-HHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc
Confidence 33444445555555 44444 455666778889999999999999999999999999988888777766654
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
.++. .+++..++.++......++.++++.|.+|++.|++++++.+....++.++++.+.+.+.+..||++
T Consensus 102 ~~~~----------~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~ 171 (413)
T PRK15403 102 TSMT----------QFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKV 171 (413)
T ss_pred CCHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 4333 233333333333333344455667899999999999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHHHHhheeccCCCC
Q 009862 478 AFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
.|++.+++.++..++.++.+||++.
T Consensus 172 ~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 172 LFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 9998888877776666666888753
No 23
>PRK10054 putative transporter; Provisional
Probab=99.47 E-value=1.2e-12 Score=137.63 Aligned_cols=167 Identities=10% Similarity=0.097 Sum_probs=121.8
Q ss_pred hhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 009862 315 FSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIIL 394 (523)
Q Consensus 315 ~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l 394 (523)
..+.+.+..++|.++++ ++|++. ....+..++..+..+++.++.|+++||+|||++++++.++.+++.+.+
T Consensus 20 ~~g~~~~~~~l~~~l~~--------~~g~s~-~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~ 90 (395)
T PRK10054 20 TIGRGATLPFMTIYLSR--------QYSLSV-DLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI 90 (395)
T ss_pred HHHHHHHHHHHHHHHHH--------HcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Confidence 34567778888888865 355555 566666777788889999999999999999999998888777766665
Q ss_pred HHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009862 395 VISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG 474 (523)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G 474 (523)
.+..++. ..++ .....++......++...+.+|.+|++.|++++++.+...++|.+++|.+.+.+.. .+
T Consensus 91 ~~~~~~~---------~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g 159 (395)
T PRK10054 91 PLVNNVT---------LVVL-FFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QS 159 (395)
T ss_pred HHHhHHH---------HHHH-HHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc
Confidence 5444332 1222 22222222233445556777899999999999999999999999999999998875 78
Q ss_pred chhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 475 LAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 475 ~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
|+..|.+.++++++..++..+++|+++
T Consensus 160 ~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 160 INLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 998888877777766555555566553
No 24
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.47 E-value=1.9e-12 Score=133.57 Aligned_cols=161 Identities=17% Similarity=0.178 Sum_probs=145.0
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
-+...-.+|.+.+++++ +...+.+..+++.++..++.++...+.+|+.||++++..+.+++++.++.++.
T Consensus 29 Efv~~gLLp~iA~dl~v----------s~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alA 98 (394)
T COG2814 29 EFVPVGLLPPIAADLGV----------SEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALA 98 (394)
T ss_pred HHHHHhchHHHHHHcCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Confidence 45677788999988666 33677777889999999999999999999999999999999999999999998
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
+++. .+++..+..+.....+.++..++++++.|+++|++++++..+...++.+++..++.++-+.+|||.
T Consensus 99 p~f~----------~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~ 168 (394)
T COG2814 99 PSFA----------VLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRA 168 (394)
T ss_pred ccHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHH
Confidence 8887 667777777777777788888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhheecc
Q 009862 478 AFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lp 498 (523)
+|++.+++.+++.+..+..+|
T Consensus 169 ~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 169 TFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999998899
No 25
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.47 E-value=3.3e-12 Score=135.93 Aligned_cols=231 Identities=19% Similarity=0.192 Sum_probs=122.0
Q ss_pred Cchh-HHHhhhhhhhhhhhhhhhcCCCCCCCCCCCcccccCcccHHHHhccchhhHHHHHHHHHHHHHhhhhhhhhhchH
Q 009862 248 EGEY-IQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTP 326 (523)
Q Consensus 248 ~~~~-~~a~~l~~~~~l~~~~~l~E~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~~~p 326 (523)
.||. +...++..++.++++..++|++.+++.. . .....++.++++ ++..+.... .++.....++.+..|+|
T Consensus 196 gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~----~-~~~~~~~~l~~~--~~~~~~~~~-~~~~~~~~~~~~~~~lp 267 (432)
T PRK10406 196 GWRIPFALGAVLAVVALWLRRQLDETSQQETRA----L-KEAGSLKGLWRN--RRAFIMVLG-FTAAGSLCFYTFTTYMQ 267 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh----h-cccccHHHHHhh--HHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 4664 2344445555666777778776532111 0 112245666653 232222222 22222334677888999
Q ss_pred HHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchh
Q 009862 327 QILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPV 406 (523)
Q Consensus 327 ~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~ 406 (523)
.++.+ .+|++. ........+..++..++.++.|+++||+|||++++++.++.+++.+.+...... ..
T Consensus 268 ~~l~~--------~~g~s~-~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~---~~- 334 (432)
T PRK10406 268 KYLVN--------TAGMHA-NVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQN---VS- 334 (432)
T ss_pred HHHHH--------hcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHc---CC-
Confidence 99875 244444 344444555566667788889999999999998776655443333222211110 00
Q ss_pred hhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCchhHHHHHHHH
Q 009862 407 LKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWI-CDIIVTYTLPVMLSSIGLAGAFGVYAVV 485 (523)
Q Consensus 407 ~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~l-G~iig~~l~~~l~~~~G~~~~f~i~~i~ 485 (523)
.....+.++ +...+......+..+.+++|+||++.|++++|+++..+++ .+...|.+.+.+ +..|+....+++.++
T Consensus 335 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~ 411 (432)
T PRK10406 335 -SPYAAFGLV-MCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTL 411 (432)
T ss_pred -cHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHH
Confidence 011111111 1111111122234456679999999999999999887765 344566766644 555644444444433
Q ss_pred HHHHHHHhheeccCCCCC
Q 009862 486 CFISWVFVFLRVPETKGM 503 (523)
Q Consensus 486 ~~i~~v~~~~~lpEtk~~ 503 (523)
+.+++++..++ .++++|
T Consensus 412 ~~~i~~~~~~~-l~~~~~ 428 (432)
T PRK10406 412 MAVVAFLVSLM-LHRKGK 428 (432)
T ss_pred HHHHHHHHHHH-hhhccc
Confidence 33333333333 334444
No 26
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.46 E-value=3.7e-13 Score=144.53 Aligned_cols=169 Identities=15% Similarity=0.108 Sum_probs=131.9
Q ss_pred HhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 009862 314 QFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLII 393 (523)
Q Consensus 314 ~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~ 393 (523)
............|.+.+++|. +. ....+....+.++.+++.++.|+++||+|||++++++.++.+++.++
T Consensus 14 ~~~~~~~~~~~~p~~~~~~g~---------s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 83 (485)
T TIGR00711 14 AVLDSTIVNVAIPTIAGDLGS---------SL-SQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLL 83 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcCC---------Ch-hhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 333456677788988887554 33 45667777889999999999999999999999999998888887776
Q ss_pred HHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 394 LVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
+....++. .+++..++.++......+....++.|.+|++.|++++++..+...+|..+++.+.+.+.+..
T Consensus 84 ~~~~~~~~----------~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 153 (485)
T TIGR00711 84 CGVAPNLE----------LMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY 153 (485)
T ss_pred HhCcCCHH----------HHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc
Confidence 65443332 34444444455555555666678899999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHhheeccCCCC
Q 009862 474 GLAGAFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 474 G~~~~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
+|++.|++.+.++++..++..+++|+++.
T Consensus 154 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 154 HWRWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred CceehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 99999998887777777666666776543
No 27
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.46 E-value=1.3e-12 Score=138.11 Aligned_cols=174 Identities=12% Similarity=0.021 Sum_probs=126.5
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 398 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~ 398 (523)
+.+..+.|.++++ .+|++. ....++..+..++.+++.++.+++.||.++++.+..+.++.+++.+.+.+..
T Consensus 240 ~~~~~~~p~~~~~--------~~g~~~-~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 310 (417)
T PRK10489 240 SAVRVLYPALADE--------VWQMGA-AQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP 310 (417)
T ss_pred HhHHHhhHHHHHh--------ccCCCh-hHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc
Confidence 3456678888876 234444 4455566677888999999999999998877777777666655554443222
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhH
Q 009862 399 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGA 478 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~ 478 (523)
+. +...++. ++.++......+...+++.|.+|++.|++++|++++...+|..+++.+.|.+.+..|....
T Consensus 311 ~~---------~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~ 380 (417)
T PRK10489 311 MW---------ILAVLCL-ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVAS 380 (417)
T ss_pred hH---------HHHHHHH-HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhH
Confidence 11 1112222 2222222233344456778999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHhheeccCCCCCCHHHHHHH
Q 009862 479 FGVYAVVCFISWVFVFLRVPETKGMPLEVITEF 511 (523)
Q Consensus 479 f~i~~i~~~i~~v~~~~~lpEtk~~~le~i~~~ 511 (523)
+.+++++.++.+++.++.+|++|+++++++++.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 381 ASASGFGLLIIGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccCC
Confidence 888888888888888888899999998887654
No 28
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.46 E-value=9.7e-13 Score=142.56 Aligned_cols=178 Identities=13% Similarity=0.059 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHH
Q 009862 304 LVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTT 383 (523)
Q Consensus 304 li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~ 383 (523)
+..+++..+....-...+..-+|.+..+++. +. ....+....+.++...+.++.|+++||+|||++++++
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~---------s~-~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~ 77 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMTLGA---------SG-NELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLG 77 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------CH-hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 3333333333344456677778999887554 33 5566777788888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeeccc-CcchhhHHHHHHHHHHHHHHHHH
Q 009862 384 IPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIF-PTKVRGICIAICAMAYWICDIIV 462 (523)
Q Consensus 384 ~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElf-P~~~Rg~a~gi~~~~~~lG~iig 462 (523)
.++.+++.+++.+..+.. .+++..++.++...+..+.....+.+.+ |++.|++++|+......+|..++
T Consensus 78 ~~~~~~~~~~~~~a~~~~----------~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~g 147 (495)
T PRK14995 78 GTLFGLASLAAAFSPTAS----------WLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFG 147 (495)
T ss_pred HHHHHHHHHHHHHcCCHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888777655443 3344444444444444444334444555 77999999999999999999999
Q ss_pred HHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 463 TYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 463 ~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
|.+.+.+.+..+|++.|++...++++..++.++++|+.+
T Consensus 148 p~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 148 PLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred HHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999888887777777777777754
No 29
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.46 E-value=1.8e-12 Score=136.16 Aligned_cols=158 Identities=16% Similarity=0.120 Sum_probs=106.2
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
..+.+..|.|.++++.|. +. ...........++.+++.++.|+++||+|||+.+..+.+..+++++.+..
T Consensus 235 ~~~~~~~~~p~~~~~~g~---------s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 304 (406)
T PRK11551 235 VLYFLLNWLPSLLVGQGL---------SR-SQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAA 304 (406)
T ss_pred HHHHHHHHHHHHHHhCCC---------Ch-hhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 456677788999877544 33 44555666778889999999999999999999988766655555444332
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
.... + .+.+..++.+++..+..+....++.|.+|++.|+++.|+.+....+|.+++|.+.+.+.+..+..
T Consensus 305 ~~~~---------~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~ 374 (406)
T PRK11551 305 APSF---------A-GMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRST 374 (406)
T ss_pred cCcH---------H-HHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCch
Confidence 2111 1 12222222333333444555677799999999999999999999999999999999998876544
Q ss_pred hH-HHHHHHHHHHHHHHhh
Q 009862 477 GA-FGVYAVVCFISWVFVF 494 (523)
Q Consensus 477 ~~-f~i~~i~~~i~~v~~~ 494 (523)
.. +++...+.++..++.+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 375 VGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 33 3333333333333333
No 30
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.45 E-value=5e-12 Score=136.39 Aligned_cols=179 Identities=12% Similarity=0.020 Sum_probs=120.8
Q ss_pred chhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCCh
Q 009862 298 GVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRR 377 (523)
Q Consensus 298 ~~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR 377 (523)
++++.+...+...++. +...+.+..+.|.+.+++| ++. ....++.+...++.+++.++.|+++||+|||
T Consensus 33 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~g---------ls~-~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r 101 (476)
T PLN00028 33 PHMRAFHLSWISFFTC-FVSTFAAAPLLPIIRDNLN---------LTK-SDIGNAGIASVSGSIFSRLAMGPVCDLYGPR 101 (476)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcC---------CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 3445555554443333 3345566667777777654 444 4455566677888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHH
Q 009862 378 KLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWI 457 (523)
Q Consensus 378 ~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~l 457 (523)
+++.++.++.+++.++..+..+.. .+++..++.+++.....+. ..+++|.+|++.|++++++.+....+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~s~~----------~l~~~r~l~G~~~~~~~~~-~~~i~~~~~~~~rg~a~g~~~~~~~~ 170 (476)
T PLN00028 102 YGSAFLLMLTAPAVFCMSLVSSAT----------GFIAVRFFIGFSLATFVSC-QYWMSTMFNGKIVGTANGIAAGWGNL 170 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHH----------HHHHHHHHHHHHHHhhHHH-HHHHHHhcChhheeHHHHHHHHHHHH
Confidence 999888877777766655443322 2222223333333333333 34568999999999999999988888
Q ss_pred HHHHHHHHHHHHHHh---------hCchhHHHHHHHHHHHHHHHhheecc
Q 009862 458 CDIIVTYTLPVMLSS---------IGLAGAFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 458 G~iig~~l~~~l~~~---------~G~~~~f~i~~i~~~i~~v~~~~~lp 498 (523)
|..+++.+.+.+... .||++.|++.++++++..++.+++.+
T Consensus 171 g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 171 GGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 888888877766431 48999999888888777666655443
No 31
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.45 E-value=1.1e-12 Score=135.16 Aligned_cols=165 Identities=18% Similarity=0.116 Sum_probs=128.3
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
.+.+....|.+.+++| ++. ....++..+..++.+++.++.|+++||+|||++++++.++.+++.+++.+.
T Consensus 10 ~~~~~~~~~~~~~~~g---------~s~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~ 79 (399)
T TIGR00893 10 RANLSFAAPMLQEDLG---------LSA-AQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA 79 (399)
T ss_pred HHhhhHhHHHHHHhhC---------CCh-hhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH
Confidence 3455666777766644 444 566677778899999999999999999999999999888887777766654
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
.+.. .+++..++.++......+....++.|.+|++.|++++++......+|.++++.+.+.+.+..+|++
T Consensus 80 ~~~~----------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 149 (399)
T TIGR00893 80 GAYV----------SLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQW 149 (399)
T ss_pred cCHH----------HHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchH
Confidence 4333 333444444444455566666788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhheeccCCCC
Q 009862 478 AFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
.|.+.++++++..++.++..||++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 150 AFIIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHHHHHHHHhhheecCCCC
Confidence 9998888887777777666776544
No 32
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.44 E-value=3.3e-12 Score=133.21 Aligned_cols=179 Identities=10% Similarity=0.045 Sum_probs=125.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHH
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLL 380 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ll 380 (523)
+.+...++..+.. ....+.+....|.+.+++| ++. ....++.++..++.+++.++.|+++||+|||+++
T Consensus 12 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~---------~s~-~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~ 80 (405)
T TIGR00891 12 NAFSAAWLGWLLD-AFDFFLVALVLAEVAGEFG---------LTT-VDAASLISAALISRWFGALMFGLWGDRYGRRLPM 80 (405)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhC---------CCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 3333333333333 3345666777777776654 444 4566677788899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHH
Q 009862 381 LTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDI 460 (523)
Q Consensus 381 l~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~i 460 (523)
+++.++.+++.+++.+..++. .+++..++.++......+....++.|.+|++.|+++.++.++...+|.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~----------~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~ 150 (405)
T TIGR00891 81 VTSIVLFSAGTLACGFAPGYI----------TMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAV 150 (405)
T ss_pred HHHHHHHHHHHHHHHHhccHH----------HHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHH
Confidence 998888877777665544333 3333344444444444555557779999999999999999999999999
Q ss_pred HHHHHHHHHHHhhC--chhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 461 IVTYTLPVMLSSIG--LAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 461 ig~~l~~~l~~~~G--~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
+++.+.+.+.+..+ |++.|.+.++..++ .++..+.+||++
T Consensus 151 ~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~-~~~~~~~~~~~~ 192 (405)
T TIGR00891 151 VAAQVYSLVVPVWGDGWRALFFISILPIIF-ALWLRKNIPEAE 192 (405)
T ss_pred HHHHHHHHHHHhcCccHHHHHHHHHHHHHH-HHHHHHhCCCCh
Confidence 99999999888776 88887765444333 344445567764
No 33
>PRK10504 putative transporter; Provisional
Probab=99.44 E-value=2.9e-12 Score=137.61 Aligned_cols=179 Identities=13% Similarity=0.078 Sum_probs=130.8
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHH
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLL 380 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ll 380 (523)
+.+++.++..++. ....+.+..+.|.+.+++|. +. ....+......++..++.+++|+++||+|||+++
T Consensus 10 ~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~g~---------s~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~ 78 (471)
T PRK10504 10 WQLWIVAFGFFMQ-SLDTTIVNTALPSMAQSLGE---------SP-LHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF 78 (471)
T ss_pred HHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHhCc---------CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 3444444444443 33466778889999987655 33 4555566777888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHH
Q 009862 381 LTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDI 460 (523)
Q Consensus 381 l~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~i 460 (523)
+.+.++.+++.+++.+..+.. .+++..++.++......+....++.|.+|++.|++++++.+....+|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~----------~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 148 (471)
T PRK10504 79 FTAIVLFTLGSLFCALSGTLN----------ELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPL 148 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCHH----------HHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 988777777666554432222 2333344444444445556667778999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 461 IVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 461 ig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
+++.+.+.+.+..+|++.|.+...++.+..++.....|+.
T Consensus 149 ~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 149 LGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred hhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999999888777776666666655654
No 34
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.43 E-value=4e-12 Score=133.18 Aligned_cols=183 Identities=11% Similarity=0.069 Sum_probs=129.6
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChH
Q 009862 299 VKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRK 378 (523)
Q Consensus 299 ~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ 378 (523)
.+|.+++..++..+..+. .+......|.+.++++. +. ....+...+..++..++.+++|+++||+|||+
T Consensus 6 ~~~~l~~~~~~~~~~~~~-~~~~~p~~~~i~~~~~~---------s~-~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~ 74 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMA-QTIYVPAIADMARDLNV---------RE-GAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRP 74 (394)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHhccHHHHHHHhCC---------CH-HHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH
Confidence 345555555555444432 34455567777776544 44 56667777888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHH
Q 009862 379 LLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWIC 458 (523)
Q Consensus 379 lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG 458 (523)
.++++.++.+++.+......++. .+++..++.++......+....+..|.++.+.|+.+.++.++...++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~----------~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (394)
T PRK11652 75 VILVGMSIFILGTLVALFAHSLT----------VLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVS 144 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHccHH----------HHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 99988887777766655433222 23333333333333333444456678899899999999999999999
Q ss_pred HHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCCC
Q 009862 459 DIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 459 ~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
..++|.+.+.+.+..||++.|++.+++.++..++..++.||++.
T Consensus 145 ~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 145 PLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 99999999999988999999988887777666666666787643
No 35
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.43 E-value=5e-12 Score=135.88 Aligned_cols=175 Identities=15% Similarity=0.141 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHH
Q 009862 303 LLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLT 382 (523)
Q Consensus 303 ~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~ 382 (523)
++..++..++.+. .++++..|+|.|+++ .+|++. ..+.+...+..++.+++.+++|+++||+|||+.++.
T Consensus 260 ~~~~~~~~~~~~~-~~~~~~~~~p~yl~~--------~~g~s~-~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~ 329 (467)
T PRK09556 260 IWLLCFANIFLYI-VRIGIDNWSPVYAFQ--------ELGFSK-EDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVA 329 (467)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHH--------ccCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH
Confidence 3444444444333 456788899999876 345555 455566667788899999999999999999987765
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHH-HHHH
Q 009862 383 TIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWI-CDII 461 (523)
Q Consensus 383 ~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~l-G~ii 461 (523)
...+.+++...+.+.. .. ..+...+..++++ ++..+.......++.|.+|++.|+++.|+.+.+.++ |.++
T Consensus 330 ~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~ 401 (467)
T PRK09556 330 CIALALIIFTLGVYQH----AT---SEYMYLASLFALG-FLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSF 401 (467)
T ss_pred HHHHHHHHHHHHHHHh----cC---cHHHHHHHHHHHH-HHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHH
Confidence 5443333222211111 01 1111112222222 122222112224456999999999999999999997 7799
Q ss_pred HHHHHHHHHH------------hhCchhHHHHHHHHHHHHHHHhhe
Q 009862 462 VTYTLPVMLS------------SIGLAGAFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 462 g~~l~~~l~~------------~~G~~~~f~i~~i~~~i~~v~~~~ 495 (523)
+|.+.|.+.+ ..+|...|.++.++++++.++..+
T Consensus 402 ~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 402 AKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 567888888876666665555443
No 36
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.43 E-value=3.3e-12 Score=134.16 Aligned_cols=179 Identities=12% Similarity=0.115 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHH
Q 009862 302 ALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLL 381 (523)
Q Consensus 302 ~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll 381 (523)
.++++++..++..+ ..+......|.+.+++|. +. ....+......++.+++.++.|+++||+|||++++
T Consensus 16 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------s~-~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 84 (406)
T PRK11551 16 TIGLCFLVALLEGL-DLQSAGVAAPRMAQEFGL---------DV-AQMGWAFSAGILGLLPGALLGGRLADRIGRKRILI 84 (406)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH
Confidence 34444444443322 345566667877776544 34 56677777888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHH
Q 009862 382 TTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDII 461 (523)
Q Consensus 382 ~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~ii 461 (523)
.+.++.+++.+++.+..++. .+++..++.+.......+....++.|.+|++.|++++++.+....+|.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 154 (406)
T PRK11551 85 VSVALFGLFSLATAQAWDFP----------SLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGAL 154 (406)
T ss_pred HHHHHHHHHHHHHHHhccHH----------HHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 98877777666555443322 23333333333333444555567899999999999999999999999999
Q ss_pred HHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 462 VTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 462 g~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
++.+.+.+.+..+|+..|++.+++.++..++..+++||+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 155 ASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 9999888888889998888877766666666666677763
No 37
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.42 E-value=7.8e-12 Score=132.61 Aligned_cols=173 Identities=11% Similarity=0.142 Sum_probs=116.5
Q ss_pred hhhhchHHHHHhcCchhhhhcc--CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 320 GVLYYTPQILEQAGVEVLLSNL--GISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 320 ~i~~~~p~il~~~G~~~~~~~l--gls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
....+.|.++++.|.+. .. ++.. .......++..+..+++.++.++++||+|||++++++.++.+++.+++...
T Consensus 226 ~~~~~~~~~~~~~g~~~---~~~~~~~~-~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~ 301 (418)
T TIGR00889 226 ITNIFGNGFLHEFGRNP---EFADSFVV-KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYG 301 (418)
T ss_pred HHHHhHHHHHHHhcccc---cccchhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc
Confidence 33456677776654310 00 0111 334555667778888999999999999999999999888777765554431
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHH-HHHHHHHHHHHHHHHHHHHhh---
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICA-MAYWICDIIVTYTLPVMLSSI--- 473 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~-~~~~lG~iig~~l~~~l~~~~--- 473 (523)
.. .....+..++..++...+.. ...+....+++|.+|++.|+++.|+.+ +...+|.+++|.+.|.+.+..
T Consensus 302 ~~-----~~~~~~~l~l~~~l~g~~~~-~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~ 375 (418)
T TIGR00889 302 DP-----EYFGYALLFLSMIVYGCAFD-FFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAY 375 (418)
T ss_pred Cc-----chhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccc
Confidence 10 00001111222222222222 333444466799999999999999997 567899999999999999874
Q ss_pred ---CchhHHHHHHHHHHHHHHHhheeccCCCC
Q 009862 474 ---GLAGAFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 474 ---G~~~~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
||+..|.+.++++++++++.++++||+++
T Consensus 376 ~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 376 GTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 57888888888888888888888888865
No 38
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.42 E-value=4.1e-12 Score=132.84 Aligned_cols=165 Identities=10% Similarity=0.090 Sum_probs=125.7
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
.+.....+|.+.+++|. +. ....+..+...++.+++.++.|+++||+|||+++.++.++.+++.++..+.
T Consensus 19 ~~~~~~~l~~~~~~~g~---------s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~ 88 (382)
T PRK10091 19 EFGIMGVLTELAHDVGI---------SI-PAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS 88 (382)
T ss_pred HHHHHhChHHHHHHcCC---------CH-HHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh
Confidence 34566677888777554 33 456677778899999999999999999999999999998888887776655
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
++.. .+++..++.++......+....++.+++|++.|+.++++......++..+++.+.+.+.+..+|++
T Consensus 89 ~~~~----------~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~ 158 (382)
T PRK10091 89 SSYL----------MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRY 158 (382)
T ss_pred CcHH----------HHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHH
Confidence 4433 333333343333333334444567899999999999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHHHHhheeccCCCC
Q 009862 478 AFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
.|.+.++++++..+..++++||.+.
T Consensus 159 ~f~~~~~~~~~~~~~~~~~lp~~~~ 183 (382)
T PRK10091 159 TFLLIAVFNIAVLASIYFWVPDIRD 183 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 9999888777776666666787543
No 39
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.42 E-value=5e-12 Score=135.71 Aligned_cols=172 Identities=17% Similarity=0.150 Sum_probs=123.1
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh-CChH
Q 009862 300 KRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA-GRRK 378 (523)
Q Consensus 300 ~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~-GRR~ 378 (523)
++.+...++..++..+ ++|++..++|.++.+ .+|++. ..+..+...+.+...++.+++|+++||+ |||+
T Consensus 8 p~~l~~l~~~~~~e~f-s~Yg~~~~L~~yL~~--------~lgls~-~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr 77 (493)
T PRK15462 8 PRAIYYVVALQIWEYF-SFYGMRALLILYLTN--------QLKYDD-NHAYELFSAYCSLVYVTPILGGFLADKVLGNRM 77 (493)
T ss_pred ChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--------hcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHH
Confidence 4666666666666666 478899999999876 355655 4556666677788888999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcc--hhhHHHHHHHHHHH
Q 009862 379 LLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTK--VRGICIAICAMAYW 456 (523)
Q Consensus 379 lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~--~Rg~a~gi~~~~~~ 456 (523)
+++++.++.++..+++....... ....+.+.+. .+..+...+...++++|+||++ .|.++.++.++..+
T Consensus 78 ~iliG~il~~lg~lll~~~~~~~--------~~~~l~l~li-~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~n 148 (493)
T PRK15462 78 AVMLGALLMAIGHVVLGASEIHP--------SFLYLSLAII-VCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGN 148 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhhcch--------hHHHHHHHHH-HHhcccccccHHHHHHHHCCCCCccccceehHHHHHHH
Confidence 99998888877765543211000 0111111111 1222233344456789999986 79999999999999
Q ss_pred HHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHH
Q 009862 457 ICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISW 490 (523)
Q Consensus 457 lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~ 490 (523)
+|++++|.+.+++.+..||+..|.+.++..++..
T Consensus 149 lG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~l 182 (493)
T PRK15462 149 VGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGL 182 (493)
T ss_pred HHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887665444433
No 40
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.42 E-value=6.8e-12 Score=132.06 Aligned_cols=165 Identities=13% Similarity=0.108 Sum_probs=121.7
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
...+...+|.+.++++ .+. ....+......++..++.++.|+++||+|||++++++.++.+++.+.+...
T Consensus 29 ~~~~~~~~~~~~~~~~---------~s~-~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 98 (406)
T PRK15402 29 NDMIQPGMLAVVEDFN---------AGA-EWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA 98 (406)
T ss_pred hhhHhcchHHHHHHhC---------CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666666644 444 455566678889999999999999999999999999888887777766554
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
.++. .+++..++.++......++...++.|.+|++.|.++.++......++..++|.+.+.+.+..+|++
T Consensus 99 ~~~~----------~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~ 168 (406)
T PRK15402 99 QSIE----------QFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRG 168 (406)
T ss_pred ccHH----------HHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccH
Confidence 3332 223333333333333344555667899999999999999888888999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHhheeccCCCC
Q 009862 478 AFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
.+++.++++++..+..++..||++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 169 MFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 9988888887777766666787754
No 41
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.41 E-value=5.8e-12 Score=134.15 Aligned_cols=170 Identities=14% Similarity=0.065 Sum_probs=109.0
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh--CCh-HHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA--GRR-KLLLTTIPVLIVSLII 393 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~--GRR-~lll~~~~l~~i~~l~ 393 (523)
.++.+..|+|.++.+ .+|++. ........+..++.+++.+++|+++||+ ++| .......+...++.+.
T Consensus 258 ~~~~~~~~~p~~l~~--------~~g~s~-~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~ 328 (434)
T PRK11663 258 VRAAINDWGNLYMSE--------TLGVDL-VTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGS 328 (434)
T ss_pred HHHHHHHHHHHHHHh--------ccCCCH-HHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHH
Confidence 355677899999865 245555 4555666778889999999999999999 333 3322222222212111
Q ss_pred HHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 394 LVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
+..... . ... .....++..+++..+...+...+++|.+|++.|++++|++++..++|.+++|.+.+++.+..
T Consensus 329 ~~~~~~-~------~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 400 (434)
T PRK11663 329 LWLMPF-A------SYV-MQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW 400 (434)
T ss_pred HHHccc-c------cHH-HHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc
Confidence 111110 0 011 11111111222222222222345689999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHhheeccCCCCC
Q 009862 474 GLAGAFGVYAVVCFISWVFVFLRVPETKGM 503 (523)
Q Consensus 474 G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~ 503 (523)
||...|.+.++++++.++..+++.++.+++
T Consensus 401 g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (434)
T PRK11663 401 HWTGFFVVISIAAGISALLLLPFLNAQAPR 430 (434)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhhchh
Confidence 999999888888877777666656655554
No 42
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.41 E-value=1.1e-11 Score=131.15 Aligned_cols=190 Identities=13% Similarity=0.065 Sum_probs=115.7
Q ss_pred HHHHhccchhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009862 291 WAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKL 370 (523)
Q Consensus 291 ~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~L 370 (523)
++.+++++..+..++.+.+.+ ..+...+.+..++|.++++.|. +. ........+..++.+++.++.+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~---------~~-~~~~~~~~~~~~~~~~g~~~~g~l 289 (426)
T PRK12307 221 MKGLFNRAQFPLTLCVFIVLF-SIFGANWPIFGLLPTYLAGEGF---------DT-GVVSNLMTAAAFGTVLGNIVWGLC 289 (426)
T ss_pred HHHHHhhchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555433333333322222 2222334566788988887544 33 344555567778899999999999
Q ss_pred HHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHH-HHhhccccccceeeecccCcchhhHHHH
Q 009862 371 MDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFC-CFVAAYGPIPNILCAEIFPTKVRGICIA 449 (523)
Q Consensus 371 sDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~i~~~~~aElfP~~~Rg~a~g 449 (523)
+||+|||+++..+.++.++.++.+....... ...+..+++.. +...+..++...++.|.+|++.|++++|
T Consensus 290 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g 360 (426)
T PRK12307 290 ADRIGLKKTFSIGLLMSFLFIFPLFRIPQDN---------YLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTG 360 (426)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHcccc---------HHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhh
Confidence 9999999988877766655444333211100 01111222222 2222333444456789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCchhHHH-HHHHHHHHHHHHhheeccCC
Q 009862 450 ICAMAYWICDIIVTYTLPVMLSSIGLAGAFG-VYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 450 i~~~~~~lG~iig~~l~~~l~~~~G~~~~f~-i~~i~~~i~~v~~~~~lpEt 500 (523)
+++...++++.++|.+.+++.+.+|+....+ +.+..+.+......+..|++
T Consensus 361 ~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (426)
T PRK12307 361 LIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTATILLIIGLSIPDR 412 (426)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhhccccCChh
Confidence 9999999999999999999999888654333 33333333333333444554
No 43
>PRK15075 citrate-proton symporter; Provisional
Probab=99.41 E-value=9.2e-12 Score=132.54 Aligned_cols=176 Identities=15% Similarity=0.150 Sum_probs=103.6
Q ss_pred hhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 009862 315 FSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIIL 394 (523)
Q Consensus 315 ~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l 394 (523)
..+++.+..|.|.|+++ .+|++. ....+...+..++.+++.++.|+++||+|||++++++.++.++..+..
T Consensus 251 ~~~~~~~~~~~p~~l~~--------~~g~~~-~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~ 321 (434)
T PRK15075 251 TVSFYLITVYTPTFGKT--------VLHLSA-ADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPA 321 (434)
T ss_pred HHHHHHHHHHHHHHHHH--------hcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 33567888999999986 234444 445566667788889999999999999999998877654433222111
Q ss_pred HHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhh
Q 009862 395 VISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWI-CDIIVTYTLPVMLSSI 473 (523)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~l-G~iig~~l~~~l~~~~ 473 (523)
.... .. .. ..........+...++ ....+..+.++.|.+|++.|+++.++.+.+... ++.++|.+.+.+.+..
T Consensus 322 ~~~~-~~--~~--~~~~~~~~~~~~~~~~-g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 322 LSWL-VA--AP--SFARMLAVELWLSFLY-GSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred HHHH-Hc--CC--chHHHHHHHHHHHHHH-HHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc
Confidence 1100 00 00 0111111111121222 233333445678999999999999997655554 5788999999999988
Q ss_pred CchhHHHHHHHHHHHHHHHhheeccCCCCCCH
Q 009862 474 GLAGAFGVYAVVCFISWVFVFLRVPETKGMPL 505 (523)
Q Consensus 474 G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~l 505 (523)
|+.+...++.+.+.+++++..+.+++.++.++
T Consensus 396 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (434)
T PRK15075 396 GDKAAPGYWLSFAAVCGLIATLVLYRRRGARL 427 (434)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccccchhh
Confidence 86433222222222333333333444444443
No 44
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.41 E-value=4.8e-12 Score=133.78 Aligned_cols=162 Identities=15% Similarity=0.098 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHH
Q 009862 302 ALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLL 381 (523)
Q Consensus 302 ~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll 381 (523)
.++..++..+. .........+..|.+.++.| ++. ....+..++..++.+++.++.|+++||+|||++++
T Consensus 19 ~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~---------~s~-~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~ 87 (426)
T PRK12307 19 ALFSAWLGYVF-DGFDFMLIFYIMYLIKADLG---------LTD-MEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMM 87 (426)
T ss_pred HHHHHHHHHHH-HHhHHHHHHHHHHHHHHHhC---------CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 33433333333 33345556666677766644 444 45666777888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHH
Q 009862 382 TTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDII 461 (523)
Q Consensus 382 ~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~ii 461 (523)
++.++.+++.++..+..+.. .+++..++.++......+....++.|.+|++.|+++.++..+...+|.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~----------~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~ 157 (426)
T PRK12307 88 WSIVAYSVGTGLSGLASGVI----------MLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNII 157 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHH----------HHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHH
Confidence 99998888877766654433 33334444444444445555677799999999999999999999999999
Q ss_pred HHHHHHHHHHhhCchhHHHHHHH
Q 009862 462 VTYTLPVMLSSIGLAGAFGVYAV 484 (523)
Q Consensus 462 g~~l~~~l~~~~G~~~~f~i~~i 484 (523)
++.+.+.+.+..+|++.|++..+
T Consensus 158 ~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 158 AAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred HHHHHHHHcccCCHHHHHHHHHH
Confidence 99999999888999998876443
No 45
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.40 E-value=2.1e-12 Score=132.18 Aligned_cols=181 Identities=13% Similarity=0.106 Sum_probs=142.6
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHH
Q 009862 300 KRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKL 379 (523)
Q Consensus 300 ~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~l 379 (523)
|.++++++++.....+..-..+..-.|.+.++.++ +..+..++.+.+.+.+-++-++.|.++||.+.|..
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~l----------sk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~f 96 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGL----------SKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYF 96 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCC----------CHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcee
Confidence 44455554444433333345667778888887555 33677777889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHH
Q 009862 380 LLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICD 459 (523)
Q Consensus 380 ll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~ 459 (523)
+.+++++++++.+++.+..+.. +..++..+-+.+-+.++.|+. ..+...||++.||+..++.|.+.++|+
T Consensus 97 m~~gLilsai~nil~Gfs~s~~---------~~~~l~~lng~fQg~Gwpp~~-~~i~~Wfsr~eRG~~~siWn~shNiGG 166 (448)
T COG2271 97 MAFGLILSAIVNILFGFSPSLF---------LFAVLWVLNGWFQGMGWPPCA-RTITHWFSRKERGTWWSIWNTSHNIGG 166 (448)
T ss_pred ehHHHHHHHHHHHHHhhhhHHH---------HHHHHHHHHHHHhcCCCcHHH-HHHHHHcCccccCceEEEehhhhhccc
Confidence 9999999999999988766544 333444444445566666665 556899999999999999999999999
Q ss_pred HHHHHHH--HHHHHhhCchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 460 IIVTYTL--PVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 460 iig~~l~--~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
.+.+.+. +.+..+.+|+..|++-++++++.++++++.+++|
T Consensus 167 al~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 167 ALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred chHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999 8888888999999999999999999888877655
No 46
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.40 E-value=6.4e-12 Score=135.63 Aligned_cols=179 Identities=11% Similarity=0.049 Sum_probs=125.3
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHH
Q 009862 300 KRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKL 379 (523)
Q Consensus 300 ~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~l 379 (523)
++.+...++..++..+ ..+.+....|.+.+++|. +. ....+......++.+++.++.|+++||+|||++
T Consensus 19 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~---------s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 87 (496)
T PRK03893 19 WKAFSAAWLGYLLDGF-DFVLITLVLTEVQGEFGL---------TT-VQAASLISAAFISRWFGGLLLGAMGDRYGRRLA 87 (496)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 3434444433333333 355666677887776544 44 455566667788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHH
Q 009862 380 LLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICD 459 (523)
Q Consensus 380 ll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~ 459 (523)
++++.++.+++.+++.+..++. .+++..++.++...+..+....++.|.+|.+.|+++.++..+...+|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~----------~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 157 (496)
T PRK03893 88 MVISIVLFSVGTLACGFAPGYW----------TLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGA 157 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 9998888887777766544333 333344444444444455555677999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 460 IIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 460 iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
++++.+.+.+.+..+|++.|++.++.++ ..++....+||+
T Consensus 158 ~~~~~~~~~l~~~~~w~~~f~~~~~~~~-~~~~~~~~~p~~ 197 (496)
T PRK03893 158 VVAAQVYSLVVPVWGWRALFFIGILPII-FALWLRKNLPEA 197 (496)
T ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHH-HHHHHHHhCCCc
Confidence 9999999999999999988876443333 333333445654
No 47
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.40 E-value=1.5e-11 Score=126.40 Aligned_cols=151 Identities=15% Similarity=0.091 Sum_probs=105.5
Q ss_pred hhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 321 VLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETL 400 (523)
Q Consensus 321 i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~ 400 (523)
...+.+.+.++.+ .+. ........+..++.+++.++.++++||+|||+.+.++.++.+++.+.+.+....
T Consensus 224 ~~~~~~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (377)
T TIGR00890 224 LIGLYKPYGQSLG---------LSD-GFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPML 293 (377)
T ss_pred HHHHHHHHHHHcC---------CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccc
Confidence 3445555655543 333 445566677888999999999999999999999888877777766554432211
Q ss_pred hccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHH
Q 009862 401 QLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFG 480 (523)
Q Consensus 401 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~ 480 (523)
. ....+....+. +.......++...+++|.+|++.|+++.|+.+....+|..++|.+.+.+.+..||...|.
T Consensus 294 ~-------~~~~~~~~~~~-g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~ 365 (377)
T TIGR00890 294 N-------DVLFLATVALV-FFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFI 365 (377)
T ss_pred h-------hHHHHHHHHHH-HHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHH
Confidence 1 11111112222 222223334444667899999999999999999999999999999999999999988887
Q ss_pred HHHHHHHHH
Q 009862 481 VYAVVCFIS 489 (523)
Q Consensus 481 i~~i~~~i~ 489 (523)
+.+++++++
T Consensus 366 ~~~~~~~~~ 374 (377)
T TIGR00890 366 VTGAFALTS 374 (377)
T ss_pred HHHHHHHHh
Confidence 777666554
No 48
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.39 E-value=1e-11 Score=127.34 Aligned_cols=168 Identities=17% Similarity=0.090 Sum_probs=120.5
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
.......+|.+..+.+. +.....++.++..++.+++.++.|+++||+|||++++.+.++.+++.+++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~----------s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 15 TAITQVALPLYVLAGTG----------SASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHhhc----------cHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 34455666777776543 23566777788889999999999999999999999999888777766665554
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
.... . .+.+ .+++..++.++......+....+++|++|++.|+++.++.+....+|.++++.+.+.+.+..+|++
T Consensus 85 ~~~~---~-~~~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~ 159 (365)
T TIGR00900 85 ALLG---G-LNIW-QVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKW 159 (365)
T ss_pred HHcC---C-CcHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 3111 0 0111 233333334444444556666788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhe-eccCC
Q 009862 478 AFGVYAVVCFISWVFVFL-RVPET 500 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~-~lpEt 500 (523)
.+++.++.+++..++.++ ..|+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ 183 (365)
T TIGR00900 160 AIWVDAVGFAISALLIVSVRIPEL 183 (365)
T ss_pred HHHHHHHHHHHHHHHHHhcccccC
Confidence 888777666555444433 33443
No 49
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.39 E-value=6.9e-12 Score=130.79 Aligned_cols=163 Identities=13% Similarity=-0.006 Sum_probs=117.4
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
...+...+|.+.+++|. +. ....++.+.+.+++.++.++.|+++||+|||++++.+......+.+.....
T Consensus 7 ~~~~~~~lp~i~~~~~~---------s~-~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 76 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDV---------SK-EELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDP 76 (368)
T ss_pred HHHHHhhHHHHHHHhCc---------CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHh
Confidence 34566778888877544 44 556667778889999999999999999999988765544443332211111
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
.++ ..+++..++.+..... ........+|.+|++.|++++++..+...+|.++++.+.+.+.+..||+.
T Consensus 77 ~~~----------~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~ 145 (368)
T TIGR00903 77 FNY----------EWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQL 145 (368)
T ss_pred ccH----------HHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH
Confidence 111 1334444443333322 23333445899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhheeccCCC
Q 009862 478 AFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
.|++.++++++..++.++++||++
T Consensus 146 ~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 146 LIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999988888888777777888864
No 50
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.39 E-value=8.7e-12 Score=134.84 Aligned_cols=167 Identities=16% Similarity=0.186 Sum_probs=124.1
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh-hCCh
Q 009862 299 VKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV-AGRR 377 (523)
Q Consensus 299 ~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr-~GRR 377 (523)
++|.+++.+++.++..+ ++|++..+++.|+++ ++|++. ....++...+.+...+..+++|+++|| +|||
T Consensus 12 ~p~~~~~~~~~~~~er~-~~y~~~~~l~~yl~~--------~lg~~~-~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r 81 (489)
T PRK10207 12 QPRPFFMIFFVELWERF-GYYGVQGILAVFFVK--------QLGFSQ-EQAFITFGAFAALVYGLISIGGYVGDHLLGTK 81 (489)
T ss_pred CChhHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--------HcCCCH-HHHHHHHHHHHHHHHHHHhhHHHhhhhccchH
Confidence 45777777777766666 478888888888876 456655 445555556666666777899999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcc--hhhHHHHHHHHHH
Q 009862 378 KLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTK--VRGICIAICAMAY 455 (523)
Q Consensus 378 ~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~--~Rg~a~gi~~~~~ 455 (523)
++++++.++.+++.+++.+..... ..+++.....+...+...+...++++|.||++ .|+.++++.++..
T Consensus 82 ~~~~~g~~~~~~g~~~~~~~~~~~---------~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~ 152 (489)
T PRK10207 82 RTIVLGAIVLAIGYFMTGMSLLKP---------DLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSI 152 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhccch---------hHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHH
Confidence 999999999988887776543211 11222333334444455566667889999987 4578899999999
Q ss_pred HHHHHHHHHHHHHHHHhhCchhHHHHHHH
Q 009862 456 WICDIIVTYTLPVMLSSIGLAGAFGVYAV 484 (523)
Q Consensus 456 ~lG~iig~~l~~~l~~~~G~~~~f~i~~i 484 (523)
++|.+++|.+.|++.+..||++.|++..+
T Consensus 153 nig~~~g~~l~g~l~~~~gw~~~F~i~~i 181 (489)
T PRK10207 153 NIGSLISLSLAPVIADKFGYSVTYNLCGA 181 (489)
T ss_pred HHHHHHHHHHHHHHHHhhChHHHHHHHHH
Confidence 99999999999999999999998887544
No 51
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.39 E-value=1.8e-11 Score=128.33 Aligned_cols=164 Identities=18% Similarity=0.218 Sum_probs=120.8
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchh----hHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSES----ASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLI 392 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~----~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l 392 (523)
+.+....++|.++++.|. +..+ ...++.++..+...++.++.|+++||+|||++++.+.++.+++.+
T Consensus 29 ~~~~~~~~l~~~~~~~g~---------~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 99 (408)
T PRK09874 29 AFSLVMPFLPLYVEQLGV---------TGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMV 99 (408)
T ss_pred HHHHhhhhHHHHHHHhCC---------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHH
Confidence 455677788999887554 3222 235566778888899999999999999999999988877777766
Q ss_pred HHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009862 393 ILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS 472 (523)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~ 472 (523)
++....++. .+++..++.++.. +..+....++.+.+|++.|+++.++.+....+|.++++.+.+.+.+.
T Consensus 100 ~~~~~~~~~----------~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 168 (408)
T PRK09874 100 LMGLAQNIW----------QFLILRALLGLLG-GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS 168 (408)
T ss_pred HHHHHhhHH----------HHHHHHHHHHHhh-hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655433322 2222222323222 23344445667899999999999999999999999999999999999
Q ss_pred hCchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 473 IGLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 473 ~G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
.+|+..+++.+++.++..++.++++|+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 169 YGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999888888777777666666664
No 52
>PRK03699 putative transporter; Provisional
Probab=99.38 E-value=2.6e-11 Score=127.26 Aligned_cols=157 Identities=15% Similarity=0.157 Sum_probs=115.1
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
...+...+|.+.+++++ +. ....+..++..++..++.+++|+++||+|||++++.+.++.+++.+++.+.
T Consensus 23 ~~~~g~~~~~i~~~~~~---------s~-~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~ 92 (394)
T PRK03699 23 VIVTGMVMGPIAEYFNL---------PV-SSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFS 92 (394)
T ss_pred HHHHhhhhHHHHHHhCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 45667778888877544 34 556666778888999999999999999999999998888777777666544
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCch
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS-SIGLA 476 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~-~~G~~ 476 (523)
.+.. .+++..++.++......+....++.|.+|++.|+.++++.+....+++.++|.+.+.+.. ..+|+
T Consensus 93 ~~~~----------~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~ 162 (394)
T PRK03699 93 HSLA----------LFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWY 162 (394)
T ss_pred chHH----------HHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 3322 233333333333333344455667899999999999999888889999999999888765 57999
Q ss_pred hHHHHHHHHHHHHHHHhh
Q 009862 477 GAFGVYAVVCFISWVFVF 494 (523)
Q Consensus 477 ~~f~i~~i~~~i~~v~~~ 494 (523)
+.|.+.++++++..++.+
T Consensus 163 ~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 163 WVYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999888877766555443
No 53
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.38 E-value=4.4e-12 Score=129.46 Aligned_cols=163 Identities=21% Similarity=0.249 Sum_probs=120.9
Q ss_pred hhhhhhchH-HHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTP-QILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 318 ~~~i~~~~p-~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
...+....| .+.++ +|.+. ....++.++..++..++.++.|+++||+|||++++++.++.+++.++..+
T Consensus 12 ~~~~~~~~~~~~~~~---------~~~s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 12 FSIISPALPLYLAEE---------LGLSP-SQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHH-HHHCC---------STTTS-HCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc---------cCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 444555666 44444 45555 45666777888999999999999999999999999998888887444443
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
..+. + .+++..++.++......+....++.|.+|.+.|++++++.+....+|.++++.+.+.+.+..+|+
T Consensus 82 ~~~~---------~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~ 151 (352)
T PF07690_consen 82 ASNF---------W-LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWR 151 (352)
T ss_dssp HCCH---------H-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHC
T ss_pred hhhH---------H-HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccc
Confidence 2221 2 34444444455545556666678899999999999999999999999999999999999888999
Q ss_pred hHHHHHHHHHHHHHHHhheeccCC
Q 009862 477 GAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 477 ~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
+.|++.++++++..++..++++++
T Consensus 152 ~~~~~~~~~~~~~~il~~~~~~~~ 175 (352)
T PF07690_consen 152 WAFLISAILSLIAAILFILFLPEP 175 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHCCC---
T ss_pred cccccccchhhhhhhhHhhhhhhc
Confidence 999999998888877644545433
No 54
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.37 E-value=2.4e-12 Score=132.47 Aligned_cols=164 Identities=14% Similarity=0.083 Sum_probs=126.8
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
...+....|.+.+++|. +. ....++.++..++.+++.++.|+++||+|||++++++.++.+++.+++.+.
T Consensus 11 ~~~~~~~~~~~~~~~g~---------s~-~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 80 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGL---------SK-TDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS 80 (379)
T ss_pred HHhhhhhhHHHHHHhCC---------CH-hHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh
Confidence 45566677877776544 44 566677778889999999999999999999999999988888887777655
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhCch
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVT-YTLPVMLSSIGLA 476 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~-~l~~~l~~~~G~~ 476 (523)
.+.. .+++..++.+++.....+....++.|.+|++.|++++++.+....+|.++++ .+.+.+....+|+
T Consensus 81 ~~~~----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 150 (379)
T TIGR00881 81 TSLW----------VMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWH 150 (379)
T ss_pred hhHH----------HHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCch
Confidence 4333 3344444444555555666777889999999999999999999999999999 4666677778999
Q ss_pred hHHHHHHHHHHHHHHHhheeccCCC
Q 009862 477 GAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 477 ~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
+.|++.++++++..++.+++.||++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 151 WVFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred hHHHHHHHHHHHHHHHHheeeCCCc
Confidence 9988888877777777777777653
No 55
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.37 E-value=8.6e-12 Score=129.48 Aligned_cols=164 Identities=18% Similarity=0.188 Sum_probs=125.9
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
.......+|.+.+++|. +. ....+...+..++..++.+++|+++||+|||+++..+.++.+++.+.+.+.
T Consensus 7 ~~~~~p~~~~~~~~~~~---------s~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~ 76 (377)
T PRK11102 7 IDMYLPALPVIAADFGV---------SA-GSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA 76 (377)
T ss_pred HHHHhccHHHHHHHhCC---------CH-HHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 34556777888877544 34 566667778889999999999999999999999999988888877776654
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
.+.. .+++..++.+++.....+....++.|.+|++.|++++++.+....+|.++++.+.+.+.+..+|++
T Consensus 77 ~~~~----------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 146 (377)
T PRK11102 77 QTID----------QLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHA 146 (377)
T ss_pred ccHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHH
Confidence 4332 233333333343444445555677999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhheeccCCC
Q 009862 478 AFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
.|++.++++++..++..+++||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 147 IFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccC
Confidence 998888888777777666677753
No 56
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.35 E-value=2.4e-11 Score=125.35 Aligned_cols=165 Identities=16% Similarity=0.144 Sum_probs=115.6
Q ss_pred hhhhhhhhhchHH-HHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 009862 315 FSGINGVLYYTPQ-ILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLII 393 (523)
Q Consensus 315 ~~g~~~i~~~~p~-il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~ 393 (523)
+...+.+..+.|. +.++ +|++. ....++..+..++.+++.+++|+++||+|||++++++.++.+++.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~---------~~~s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDD---------LGLST-AQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHhHHhhhHHHHHH---------hCCCH-HHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 3345677888886 4444 45555 56667777889999999999999999999999999998888888777
Q ss_pred HHHHH-hhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009862 394 LVISE-TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS 472 (523)
Q Consensus 394 l~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~ 472 (523)
+.+.. ++. .+++..++.+.....+ +....++++.+|++.|+++.++......+|..+++.+.+.+...
T Consensus 84 ~~~~~~~~~----------~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 152 (366)
T TIGR00886 84 AGLAVQSYS----------VLLLLRLFIGIAGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGS 152 (366)
T ss_pred HHHHhhhHH----------HHHHHHHHHHHhchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 66544 332 2333333333333333 33446678999999999999999988889998888888877653
Q ss_pred ----------hCchhHH-HHHHHHHHHHHHHhheeccCC
Q 009862 473 ----------IGLAGAF-GVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 473 ----------~G~~~~f-~i~~i~~~i~~v~~~~~lpEt 500 (523)
.+|++.+ ++.+++..+..++.+++.+++
T Consensus 153 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (366)
T TIGR00886 153 LIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADT 191 (366)
T ss_pred HHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccC
Confidence 3788888 443555444444444445544
No 57
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.35 E-value=2.7e-11 Score=129.66 Aligned_cols=164 Identities=13% Similarity=0.014 Sum_probs=110.3
Q ss_pred hhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 321 VLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETL 400 (523)
Q Consensus 321 i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~ 400 (523)
+.+.+|.+.++ |+ +. ....+..++..++..++.++.|+++||+|||++++++.++.+++.+++.+....
T Consensus 48 ~~~~~p~l~~~-g~---------s~-~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~ 116 (452)
T PRK11273 48 FALAMPYLVEQ-GF---------SR-GDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWA 116 (452)
T ss_pred HHHhhHHHHHc-CC---------CH-HHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcc
Confidence 45566765543 44 44 566777778899999999999999999999999999988888777766543211
Q ss_pred hccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCchhHH
Q 009862 401 QLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDII-VTYTLPVMLSSIGLAGAF 479 (523)
Q Consensus 401 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~ii-g~~l~~~l~~~~G~~~~f 479 (523)
. .. ...+++..++.+.+.....+.....+.+.+|++.|++++++.+....+|..+ ++.+...+....+|++.|
T Consensus 117 ~-----~~-~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f 190 (452)
T PRK11273 117 T-----SS-IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAAL 190 (452)
T ss_pred c-----cc-HHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHH
Confidence 0 01 1122222233333333333433345689999999999999998888888644 444333333345899999
Q ss_pred HHHHHHHHHHHHHhheeccCCC
Q 009862 480 GVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 480 ~i~~i~~~i~~v~~~~~lpEtk 501 (523)
++.++++++..++..+++||+.
T Consensus 191 ~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 191 YMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred HHHHHHHHHHHHHHHHHccCCH
Confidence 8888877777777767677653
No 58
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.35 E-value=2.2e-11 Score=128.29 Aligned_cols=164 Identities=13% Similarity=0.063 Sum_probs=120.5
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
+.+.+..++|.++++ ++|++. ....+...+..+...+..+++|+++||+|||++++++.++.+++++.+.+
T Consensus 25 ~~~~~~~~~~~~~~~--------~~g~s~-~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~ 95 (400)
T PRK11646 25 GFFVVFPLISIRFVD--------QLGWAA-VMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI 95 (400)
T ss_pred HHHHHHHHHHHHHHH--------HhCCcH-HHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 355666777776654 345555 55666666777888888999999999999999999998888887777654
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
..+.+ .+++..++.++......+...+++.+.+|++.|++++++......+|..+++.+.+.+. ..+|+
T Consensus 96 ~~~~~----------~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~ 164 (400)
T PRK11646 96 AHEPW----------LLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFR 164 (400)
T ss_pred hccHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHH
Confidence 33222 22333333333333344555566789999999999999999999999999999999998 67999
Q ss_pred hHHHHHHHHHHHHHHHhheeccCC
Q 009862 477 GAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 477 ~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
+.|++.++++++..++..+++||.
T Consensus 165 ~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 165 LVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999888777776665555556664
No 59
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.34 E-value=6.5e-11 Score=126.76 Aligned_cols=168 Identities=13% Similarity=0.206 Sum_probs=103.8
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh--CChHHHHH-HHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA--GRRKLLLT-TIPVLIVSLIIL 394 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~--GRR~lll~-~~~l~~i~~l~l 394 (523)
.+.+..|.|.++++. .|++. ........+..++.+++.+++|+++||+ +||....+ ...+..++.+++
T Consensus 269 ~~~~~~~~P~~l~~~--------~g~s~-~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~ 339 (452)
T PRK11273 269 RYGILDWSPTYLKEV--------KHFAL-DKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVY 339 (452)
T ss_pred HHHHHHHHHHHHHHh--------cCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHH
Confidence 567788999999872 34444 3455556677788889999999999999 55543222 222222222211
Q ss_pred HHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHH-HHHHHHHHHHhh
Q 009862 395 VISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDII-VTYTLPVMLSSI 473 (523)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~ii-g~~l~~~l~~~~ 473 (523)
.+.. .. ..+...+.+..+. ....+.......++.|.+|++.|++++|+.+...++|+.+ +|.+.+.+.+..
T Consensus 340 ~~~~-----~~--~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~ 411 (452)
T PRK11273 340 WLNP-----AG--NPTVDMACMIVIG-FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF 411 (452)
T ss_pred HHhc-----cc--ChHHHHHHHHHHH-HHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh
Confidence 1110 00 0111111112221 1111211222344579999999999999999998998765 799999999999
Q ss_pred CchhHHHHHHHHHHHHHHHhhe-eccCCCC
Q 009862 474 GLAGAFGVYAVVCFISWVFVFL-RVPETKG 502 (523)
Q Consensus 474 G~~~~f~i~~i~~~i~~v~~~~-~lpEtk~ 502 (523)
|+...|++.+++++++.++..+ ..+|+|+
T Consensus 412 g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 441 (452)
T PRK11273 412 GWDGGFMVMIGGSILAVILLIVVMIGEKRH 441 (452)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 9999998888877776665553 3345544
No 60
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.34 E-value=4.8e-11 Score=123.02 Aligned_cols=166 Identities=18% Similarity=0.189 Sum_probs=107.4
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHH-HHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLL-TTIPVLIVSLIILV 395 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll-~~~~l~~i~~l~l~ 395 (523)
..+.+..|.|.++++ .++.+. ....+...+..++.+++.++.++++||++||+..+ .......++.+...
T Consensus 230 ~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
T TIGR00893 230 GLGFFLTWFPTYLVQ--------ERGLSI-LEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLS 300 (399)
T ss_pred HHHHHHHHHHHHHHH--------HhcccH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Confidence 456777888988866 234444 45556666778889999999999999999996211 11111111111111
Q ss_pred HHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-
Q 009862 396 ISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG- 474 (523)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G- 474 (523)
..... ....... ...+ ......++..+..+..+.+++|.+|++.|++++++.+.+.++|..+++.+.+.+.+..|
T Consensus 301 ~~~~~--~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~ 376 (399)
T TIGR00893 301 LLMFA--TNYVNIP-YAAL-ALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGS 376 (399)
T ss_pred HHHHH--hccchhH-HHHH-HHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCc
Confidence 11100 0000111 1122 22222233333567777888999999999999999999999999999999999999988
Q ss_pred chhHHHHHHHHHHHHHHHhhe
Q 009862 475 LAGAFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 475 ~~~~f~i~~i~~~i~~v~~~~ 495 (523)
+...+.+.++++++..++.++
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 377 FAGALMVVAALALIGALSYLL 397 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 888887777776666555443
No 61
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.33 E-value=3.4e-11 Score=129.86 Aligned_cols=172 Identities=17% Similarity=0.164 Sum_probs=124.7
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh-hCChHH
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV-AGRRKL 379 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr-~GRR~l 379 (523)
+.++..++..++..+ +++++..++|.|+.+.+ .+|++. ..+..+...+.++..++.+++|+++|| +|||++
T Consensus 10 ~~~~~l~~~~~~~~~-~~~~~~~~L~~yl~~~~------~lg~s~-~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~ 81 (475)
T TIGR00924 10 KPLFTLFFVELWERF-SYYGMQGILAVYLVQQA------GLGFSQ-EQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT 81 (475)
T ss_pred hhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCC------CCCCCH-HHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH
Confidence 444444444444344 57888999999987621 145555 566667778889999999999999999 899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcch---hhHHHHHHHHHHH
Q 009862 380 LLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKV---RGICIAICAMAYW 456 (523)
Q Consensus 380 ll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~---Rg~a~gi~~~~~~ 456 (523)
++++.++.+++.+++.+..+.. .+++..++.+...+...+...+++++++|++. |+++.++.++..+
T Consensus 82 l~~~~~~~~~g~~~~~~~~~~~----------~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~n 151 (475)
T TIGR00924 82 MVLGGIVLMLGHFMLAMSIYPD----------LIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSIN 151 (475)
T ss_pred HHHHHHHHHHHHHHHHhcccHh----------HHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHH
Confidence 9999988888777665433221 22222333333344455666677789998754 8999999999999
Q ss_pred HHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHH
Q 009862 457 ICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISW 490 (523)
Q Consensus 457 lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~ 490 (523)
+|.++++.+.+++.+..||+..|.+.++.+++..
T Consensus 152 iG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~ 185 (475)
T TIGR00924 152 IGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGL 185 (475)
T ss_pred HHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 9999999999999999999998887765554443
No 62
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.32 E-value=3.4e-11 Score=129.12 Aligned_cols=160 Identities=12% Similarity=0.043 Sum_probs=112.6
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 398 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~ 398 (523)
+.+..+.|.+.+++|. +. ....++..+..+...++.++.|+++||+|||++++++.++.++..+++.+..
T Consensus 36 ~~~~~~~~~i~~~~g~---------s~-~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~ 105 (455)
T TIGR00892 36 KAVTVFFKELQQIFQA---------TY-SETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSS 105 (455)
T ss_pred cchhhhHHHHHHHhCc---------ch-hHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhh
Confidence 4556677888777544 34 4555566677777788889999999999999999998888877776665544
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhH
Q 009862 399 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGA 478 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~ 478 (523)
+.. ..++...++.++......+....++.+.+| +.|+++.++.+....+|..+++.+.+.+.+.+||++.
T Consensus 106 ~~~---------~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~ 175 (455)
T TIGR00892 106 NVI---------ELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGS 175 (455)
T ss_pred hHH---------HHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHH
Confidence 333 111222222222222222333355678886 7899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhheecc
Q 009862 479 FGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 479 f~i~~i~~~i~~v~~~~~lp 498 (523)
|++.+++++++.+..++..+
T Consensus 176 f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 176 FLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 99988877666554444333
No 63
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.32 E-value=1.9e-11 Score=125.76 Aligned_cols=161 Identities=15% Similarity=0.123 Sum_probs=117.5
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
.+.+..+.|.+.+++|. +. ....+..++..++..++.++.|+++||+|||++++++.++.+++.+...+.
T Consensus 19 ~~~~~~~~~~~~~~~~~---------s~-~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~ 88 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGV---------GV-TAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIA 88 (377)
T ss_pred HhhhhhHHHHHHHHhCC---------CH-HHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHH
Confidence 44566778888777544 34 567777889999999999999999999999999999988888887776665
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
.++. .+++...+.+.......+.....+.+.+| +.|+++.++......+|.++++.+.+.+.+..+|++
T Consensus 89 ~~~~----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 157 (377)
T TIGR00890 89 DSLA----------ALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPA 157 (377)
T ss_pred HHHH----------HHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHH
Confidence 5443 22222223222222222233344567777 569999999999999998888878888888889999
Q ss_pred HHHHHHHHHHHHHHHhheeccC
Q 009862 478 AFGVYAVVCFISWVFVFLRVPE 499 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lpE 499 (523)
.|.+.++++++..+..++++++
T Consensus 158 ~f~~~~~~~~~~~~~~~~~~~~ 179 (377)
T TIGR00890 158 AFIYMGIIFLLVIVLGAFLIGY 179 (377)
T ss_pred HHHHHHHHHHHHHHHHHHheec
Confidence 9998888887777666655543
No 64
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.32 E-value=5.1e-11 Score=124.26 Aligned_cols=215 Identities=11% Similarity=0.057 Sum_probs=120.2
Q ss_pred Cchh--HHHhhhhhhhhhhhhhhhcCCCCCCCCCCCcccccCcccHHHHhccchhhHHHHHHHHHHHHHhhhhhhhhhch
Q 009862 248 EGEY--IQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYT 325 (523)
Q Consensus 248 ~~~~--~~a~~l~~~~~l~~~~~l~E~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~~~ 325 (523)
+||. ...+++.....+..+..++|+|+.+.... +..+....++.++++ +.++..++..+ +....++++..|+
T Consensus 142 gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~--~~~~~~~~~~~ll~~---~~~~~~~~~~~-~~~~~~~~~~~wl 215 (368)
T TIGR00903 142 GLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGF--GFKDAVKEFGALAGR---KDLWIIGAILG-FGVALFDNLAIWL 215 (368)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCc--chHHHHHHHHHHHcC---hhHHHHHHHHH-HHHHHHHHHHHHH
Confidence 4554 33345544555556667788765432110 000001134555554 33333333333 3344577889999
Q ss_pred HHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCCh---HHHHH-HHHHHHHHHHHHHHHHhhh
Q 009862 326 PQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRR---KLLLT-TIPVLIVSLIILVISETLQ 401 (523)
Q Consensus 326 p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR---~lll~-~~~l~~i~~l~l~~~~~~~ 401 (523)
|+++++.|+ +. . ......+.. +.+.+..++++||+.|| +.... ..++.+++++++....
T Consensus 216 p~~L~~~g~---------s~-~-~~~~~~l~~---~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~--- 278 (368)
T TIGR00903 216 EAALRPAGL---------ED-I-AGDAVALAI---LAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFEL--- 278 (368)
T ss_pred HHHHHHCCC---------Ch-H-HHHHHHHHH---HHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcc---
Confidence 999987544 22 2 222333333 34444557888887653 33232 2222222222222111
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHH
Q 009862 402 LISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGV 481 (523)
Q Consensus 402 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i 481 (523)
. .... +.+....+++.....+..+++.+|++|++.|++++|+.+..++++++++|.+.+.+.. +....|.+
T Consensus 279 ---~---~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~ 349 (368)
T TIGR00903 279 ---N---RLAL-FAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTF 349 (368)
T ss_pred ---c---cHHH-HHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHH
Confidence 0 1111 2222223333434444556778999999999999999999999999999999988773 66677888
Q ss_pred HHHHHHHHHHHhh
Q 009862 482 YAVVCFISWVFVF 494 (523)
Q Consensus 482 ~~i~~~i~~v~~~ 494 (523)
+++.++++++.+.
T Consensus 350 ~~~~~~i~~~~~~ 362 (368)
T TIGR00903 350 LAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHHHH
Confidence 8777777666654
No 65
>PRK11043 putative transporter; Provisional
Probab=99.32 E-value=7.1e-11 Score=124.02 Aligned_cols=147 Identities=14% Similarity=0.074 Sum_probs=107.5
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHH
Q 009862 341 LGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYF 420 (523)
Q Consensus 341 lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 420 (523)
++.+. ....+..++..++..++.+++|+++||+|||++++.+.++.+++.+++.+..++. .+++..++.
T Consensus 36 ~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~----------~l~~~~~l~ 104 (401)
T PRK11043 36 LQTSA-SAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAA----------QLLVLRFVQ 104 (401)
T ss_pred HCCCH-HHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHH----------HHHHHHHHH
Confidence 44444 5667777788899999999999999999999999988887777766665443322 222222222
Q ss_pred HHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheecc
Q 009862 421 CCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 421 ~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lp 498 (523)
++......+....++.|.+|.+.|+...+..+....++..++|.+.+++.+..+|+..+++.+++.++..++.+++.+
T Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T PRK11043 105 AVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKP 182 (401)
T ss_pred HhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 222222233334566899999999999999888899999999999999999999999988887777766655544333
No 66
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.32 E-value=1.7e-10 Score=119.24 Aligned_cols=155 Identities=13% Similarity=0.133 Sum_probs=101.4
Q ss_pred hhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHh
Q 009862 320 GVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISET 399 (523)
Q Consensus 320 ~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~ 399 (523)
....+.|.++.+ .+|.+. ........+..+..+++.++.+++.||+|||+++.++.++..++.+.+....+
T Consensus 217 ~~~~~~~~~~~~--------~~g~~~-~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 287 (375)
T TIGR00899 217 LYIINMPLLIIH--------ELGLPD-KLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNS 287 (375)
T ss_pred HHHhhhHHHHHH--------HcCCCH-HHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777654 244444 33444444555667788899999999999999888776655444333322111
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHH
Q 009862 400 LQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAF 479 (523)
Q Consensus 400 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f 479 (523)
. +...+...+...+.+ ...+....++.|.+|.+ |++++++++...++|..+++.+.+.+.+..|++..+
T Consensus 288 ~---------~~~~~~~~~~g~~~g-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~ 356 (375)
T TIGR00899 288 L---------WALLMLQLLNAIFIG-ILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVY 356 (375)
T ss_pred H---------HHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Confidence 1 122222222222222 23344456678888865 669999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHhh
Q 009862 480 GVYAVVCFISWVFVF 494 (523)
Q Consensus 480 ~i~~i~~~i~~v~~~ 494 (523)
++.++++++..++..
T Consensus 357 ~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 357 WFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHh
Confidence 887777666655543
No 67
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.32 E-value=8e-11 Score=127.81 Aligned_cols=149 Identities=16% Similarity=0.114 Sum_probs=107.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
....++.....++.+++.+++|+++||+|||+++++++++..++.++..+..... .......+++..++.++..++
T Consensus 56 ~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~----~~~~~~~~~~~r~l~G~~~g~ 131 (502)
T TIGR00887 56 SVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSS----PKSVMATLCFWRFWLGVGIGG 131 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcc----cchHHHHHHHHHHHHHHHHhh
Confidence 3456777888899999999999999999999999988888877776655432210 000112344444455555555
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hhCchhHHHHHH
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS-----------------------SIGLAGAFGVYA 483 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~-----------------------~~G~~~~f~i~~ 483 (523)
..+....+++|.+|++.|++++++.++...+|.++++.+...+.. ..+|+..+.+.+
T Consensus 132 ~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ 211 (502)
T TIGR00887 132 DYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGA 211 (502)
T ss_pred hhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHH
Confidence 566667889999999999999999999999999999888776543 136888886655
Q ss_pred HHHHHHHHHhheeccCC
Q 009862 484 VVCFISWVFVFLRVPET 500 (523)
Q Consensus 484 i~~~i~~v~~~~~lpEt 500 (523)
+.+++ .++..+++||+
T Consensus 212 ip~~i-~~~~~~~lpES 227 (502)
T TIGR00887 212 VPALL-ALYFRLTIPET 227 (502)
T ss_pred HHHHH-HHHHHHhCCCC
Confidence 54444 44445668998
No 68
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.32 E-value=7.5e-11 Score=126.65 Aligned_cols=159 Identities=16% Similarity=0.041 Sum_probs=114.3
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhc--cchhhhHHHHHHHHHH
Q 009862 341 LGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQL--ISPVLKAGISTACVII 418 (523)
Q Consensus 341 lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~--~~~~~~~~~~~i~~~~ 418 (523)
++.+. ....+..++..++.+++.+++|+++||+|||++++++.++.+++.+...+...... .......+..+++..+
T Consensus 50 ~~~~~-~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~ 128 (479)
T PRK10077 50 ESAAN-SLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRI 128 (479)
T ss_pred ccCCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHH
Confidence 35555 45567778889999999999999999999999999998888777665554211100 0011112234455556
Q ss_pred HHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH--------HhhCchhHHHHHHHHHHHHH
Q 009862 419 YFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVML--------SSIGLAGAFGVYAVVCFISW 490 (523)
Q Consensus 419 ~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~--------~~~G~~~~f~i~~i~~~i~~ 490 (523)
+.++..++..+...++++|++|++.|++++++......+|.++++.+...+. ...||++.|++.+++.++..
T Consensus 129 l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 208 (479)
T PRK10077 129 IGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL 208 (479)
T ss_pred HHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH
Confidence 6666666667777788899999999999999999998999888877665443 34689999988776666654
Q ss_pred HHhheeccCCC
Q 009862 491 VFVFLRVPETK 501 (523)
Q Consensus 491 v~~~~~lpEtk 501 (523)
+ ..+++||+.
T Consensus 209 ~-~~~~l~~s~ 218 (479)
T PRK10077 209 M-LLYFVPETP 218 (479)
T ss_pred H-HHHcCCCCc
Confidence 4 455688874
No 69
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.31 E-value=1.5e-10 Score=121.55 Aligned_cols=162 Identities=12% Similarity=0.117 Sum_probs=101.7
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
++.+..+.|.++++ .++++. ....++..+..+..+++.+++|+++||+|||+.+..+.+..++.++.+...
T Consensus 232 ~~~~~~~~p~~l~~--------~~~~~~-~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 302 (393)
T PRK15011 232 NSLYIINMPLFIIN--------ELHLPE-KLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA 302 (393)
T ss_pred HHHHHHHHHHHHHH--------HcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 34455678888765 345555 344444455667778889999999999999998776655444433222211
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
.+ .+..++...+...+.+... +....+..|.+|.+ |++++++++...++|..+++.+.+.+.+..||+.
T Consensus 303 ~~---------~~~~l~~~~l~~~~~g~~~-~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~ 371 (393)
T PRK15011 303 HS---------PAILLGLQLLNAIYIGILG-GIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHA 371 (393)
T ss_pred hh---------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 11 1111211111111212111 12234457888864 9999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHhheeccCC
Q 009862 478 AFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
.+.+..+++++.. +.++++||+
T Consensus 372 ~~~~~~~~~~~~~-~~~~~~~~~ 393 (393)
T PRK15011 372 VFWFALVMIIATL-FCLLRIKDV 393 (393)
T ss_pred HHHHHHHHHHHHH-HHHHhhcCC
Confidence 8776665555544 444455653
No 70
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.30 E-value=6.9e-11 Score=127.92 Aligned_cols=146 Identities=16% Similarity=0.058 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccc
Q 009862 353 SAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPN 432 (523)
Q Consensus 353 ~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~ 432 (523)
..+..++..++.+++|+++||+|||++++++.++++++.+++++.+++...+ . .....+++..++.++..++..+...
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g-~-~a~~~l~~~R~l~G~g~g~~~~~~~ 140 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIG-I-WAPILLLLCKMAQGFSVGGEYTGAS 140 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHH-H-HHHHHHHHHHHHHHhHhHhhHHHHH
Confidence 3566688889999999999999999999999999999988888766543000 0 0111244455555555556666666
Q ss_pred eeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------hhCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 433 ILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS--------SIGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 433 ~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~--------~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
.+++|.+|++.|+...++......+|.++++.+...+.. .+||++.|++.++++++ .++..+.+||+.
T Consensus 141 ~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp 216 (490)
T PRK10642 141 IFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETP 216 (490)
T ss_pred HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCCh
Confidence 888999999999999999888888888888776655432 57999999886654443 344455678863
No 71
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.30 E-value=6.6e-11 Score=125.26 Aligned_cols=143 Identities=11% Similarity=0.084 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhcc
Q 009862 348 ASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAY 427 (523)
Q Consensus 348 ~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 427 (523)
....+..+..+..+++.+++++++||+|||+.+.++.++.++..+++.+..+.. . ++...++.+......
T Consensus 263 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~---------~-~~~~~~l~g~~~~~~ 332 (420)
T PRK09528 263 VFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPL---------E-VSILKLLHAFEVPFL 332 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHH---------H-HHHHHHHHHHHHHHH
Confidence 444555667778889999999999999999998887777766655554322211 1 222222222222222
Q ss_pred ccccceeeecccCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 428 GPIPNILCAEIFPTKVRGICIAI-CAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 428 ~~i~~~~~aElfP~~~Rg~a~gi-~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
.+....++.|.+|++.|+++.++ .++...+|.++++.+.+++.+..||+..|.+.+++.++..++.++.+++.
T Consensus 333 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 333 LVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 22333566888999999988766 57788899999999999999999999999888888777766666555543
No 72
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.29 E-value=5.5e-11 Score=126.72 Aligned_cols=184 Identities=11% Similarity=0.040 Sum_probs=121.1
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHH
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLL 380 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ll 380 (523)
+..+.++++.....+.....+.+..|.+. +.|+ +. ....+...+..++..++.++.|+++||+|||+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~---------s~-~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~ 94 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYLV-EQGF---------SK-GELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL 94 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHHH-HcCC---------CH-hHhHHHHHHHHHHHHHhhhccchhhhccCCceeh
Confidence 33444444433333333334455566554 3343 34 5666777788899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHH
Q 009862 381 LTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDI 460 (523)
Q Consensus 381 l~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~i 460 (523)
+++.++.+++.+++....... .....+.+..++.+++.....+....++.|++|++.|++++++.++...+|.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ 168 (438)
T TIGR00712 95 PAGLILSAAVMLLMGFVPWAT------SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGG 168 (438)
T ss_pred HHHHHHHHHHHHHHhcccccc------chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhH
Confidence 888877777766554322110 01112222222223322223333345568999999999999999999999999
Q ss_pred HHHHHHHHHHH-hhCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 461 IVTYTLPVMLS-SIGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 461 ig~~l~~~l~~-~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
+++.+.+.+.. ..+|+..|++.++++++..++.++++||++
T Consensus 169 ~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 169 IPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 99888776554 468999999888888877776666677653
No 73
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.29 E-value=2.2e-12 Score=133.23 Aligned_cols=182 Identities=18% Similarity=0.114 Sum_probs=145.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHH
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLL 380 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ll 380 (523)
+.+++.+++..+...- -|.+....+.+-+ .++++. ....+++..+.+...++.+++|++.||+.||.++
T Consensus 33 ~~l~il~~vnlmny~D-r~~iagv~~~v~~---------~fni~~-s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~ 101 (493)
T KOG1330|consen 33 LTLVILCLVNLMNYAD-RYTIAGVLKEVQT---------YFNISD-SELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI 101 (493)
T ss_pred HHHHHHHHHHHHHHhh-hhhhhhhhHHHHH---------hcCCCc-hhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE
Confidence 4444555555544332 3444443333333 355555 5667788899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHH
Q 009862 381 LTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDI 460 (523)
Q Consensus 381 l~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~i 460 (523)
.++..+..++.++..+...++ .+++...+.+..-+.+.|+...+++|.||...|++++++.+++..+|..
T Consensus 102 ~vG~~iW~~Av~~~~fs~~Fw----------q~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsg 171 (493)
T KOG1330|consen 102 AVGIFIWTLAVFASGFSNHFW----------QVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSG 171 (493)
T ss_pred eeHHHHHHHHHHHHHHHHHHH----------HHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccc
Confidence 999999999999888776655 5666777777777888888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhC-chhHHHHHHHHHHHHHHHhheeccCCCCC
Q 009862 461 IVTYTLPVMLSSIG-LAGAFGVYAVVCFISWVFVFLRVPETKGM 503 (523)
Q Consensus 461 ig~~l~~~l~~~~G-~~~~f~i~~i~~~i~~v~~~~~lpEtk~~ 503 (523)
+|-.+...+....+ |++.|.+.+++.++++++.+++++|..++
T Consensus 172 lG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 172 LGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERG 215 (493)
T ss_pred eeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccc
Confidence 99888888887776 99999999999999999999988887654
No 74
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.29 E-value=2.5e-11 Score=106.31 Aligned_cols=136 Identities=17% Similarity=0.212 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhcccccccee
Q 009862 355 FTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNIL 434 (523)
Q Consensus 355 i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~ 434 (523)
...++.+++.++.+++.||+|||+.+..+..+..++.+.+....+.. .+.+..++.++......+..+.+
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~g~~~~~~~~~~~~~ 75 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNIT----------VLIIARFLQGFGAAFALVAGAAL 75 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHH----------HHHHHHHHHHHHHHHHHHhHHHH
Confidence 34567788899999999999999999888877777666554432221 22222333333333344556677
Q ss_pred eecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 435 CAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 435 ~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
+.|.+|++.|+++.++.+....+|..+++.+.+.+.+..+|+..+.+..+++++..++.+++.||+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 76 IADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 799999999999999999999999999999999999888998888888888887777777767764
No 75
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.29 E-value=7e-11 Score=119.97 Aligned_cols=157 Identities=20% Similarity=0.192 Sum_probs=122.3
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
+.+....+.|.+.++.+. +. ....+...+..++.+++.++.|+++||+|||+.++++.++..++.+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~ 83 (352)
T cd06174 14 DRGLLSPALPLLAEDLGL---------SA-SQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF 83 (352)
T ss_pred hhhhhHhhHHHHHHHcCC---------CH-HHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH
Confidence 456677788888877544 33 56667777888999999999999999999999999998888888777665
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
..+.. .+++..++.++......+....++.|++|++.|++.+++.+....+|..+++.+.+.+.+..+|+
T Consensus 84 ~~~~~----------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 153 (352)
T cd06174 84 ASSLW----------LLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWR 153 (352)
T ss_pred hccHH----------HHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 43322 33344444444444555666678899999999999999999999999999999999999998998
Q ss_pred hHHHHHHHHHHHHHHHh
Q 009862 477 GAFGVYAVVCFISWVFV 493 (523)
Q Consensus 477 ~~f~i~~i~~~i~~v~~ 493 (523)
..+++.+++.++..++.
T Consensus 154 ~~~~~~~~~~~~~~~~~ 170 (352)
T cd06174 154 WLFLILAILGLLLALLL 170 (352)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88887776666555444
No 76
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.28 E-value=3.1e-11 Score=129.75 Aligned_cols=167 Identities=9% Similarity=-0.034 Sum_probs=117.3
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
-..+....|.+.+++ |++. ....++.+.+.+++.++.++.|+++||+|||+++.+++++.+++.+++...
T Consensus 45 r~~~~~~~~~i~~~~---------~~s~-~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~ 114 (467)
T PRK09556 45 RKNFKAAQNDMISTY---------GLST-TELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGAS 114 (467)
T ss_pred hcChhhhhHHHHHhc---------CCCH-HHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHH
Confidence 344555577777764 4444 566677778899999999999999999999999988888777766655542
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---C
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI---G 474 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~---G 474 (523)
.... ......+++..++.+++.....+....+++|++|++.|++++|+......+|.++++.+..++.... +
T Consensus 115 ~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~ 189 (467)
T PRK09556 115 LGSG-----SVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGH 189 (467)
T ss_pred Hhcc-----cchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCc
Confidence 1110 0111233334444444444445566677899999999999999999999999999998887776653 5
Q ss_pred chhHHHHHHHHHHHHHHHhheeccC
Q 009862 475 LAGAFGVYAVVCFISWVFVFLRVPE 499 (523)
Q Consensus 475 ~~~~f~i~~i~~~i~~v~~~~~lpE 499 (523)
|+..|.+.+++.++.+++.++++++
T Consensus 190 ~~~~f~~~g~~~~~~~i~~~~~~~~ 214 (467)
T PRK09556 190 VIGMFIFPSIIALIIGFIGLRYGSD 214 (467)
T ss_pred chhHHHHHHHHHHHHHHHHHHhCCC
Confidence 7777777777766666655555443
No 77
>PRK12382 putative transporter; Provisional
Probab=99.28 E-value=9.7e-11 Score=122.62 Aligned_cols=160 Identities=12% Similarity=0.004 Sum_probs=107.1
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
+.......+|.++.+ ++|++. ....+..++..+...++.+++|+++||+|||++++++.++..++.+....
T Consensus 30 ~~~~~~p~l~~~l~~--------~lg~s~-~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~ 100 (392)
T PRK12382 30 TVGLPLPVIPLFVHH--------DLGFGN-TMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLL 100 (392)
T ss_pred HHHHHhhhhhHHHHH--------hcCCcH-HHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHh
Confidence 345556667766543 345555 56677777889999999999999999999999999887776655443222
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
..... .........+++..++.+.......+....++.|.+|++.|++++++......+|..+++.+.+.+.+..||+
T Consensus 101 ~~~~~--~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 178 (392)
T PRK12382 101 AAILP--VSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFA 178 (392)
T ss_pred hhccc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChH
Confidence 11100 0001111223333333333333333444456689999999999999999999999999999999999988988
Q ss_pred hHHHHHHHHHH
Q 009862 477 GAFGVYAVVCF 487 (523)
Q Consensus 477 ~~f~i~~i~~~ 487 (523)
..+.+..++.+
T Consensus 179 ~~~~~~~~~~~ 189 (392)
T PRK12382 179 ALALTTMVLPL 189 (392)
T ss_pred HHHHHHHHHHH
Confidence 76655444433
No 78
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.27 E-value=3.9e-10 Score=118.82 Aligned_cols=163 Identities=13% Similarity=0.121 Sum_probs=105.9
Q ss_pred hhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHH-HHHHHHHHHHHHH
Q 009862 316 SGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLL-TTIPVLIVSLIIL 394 (523)
Q Consensus 316 ~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll-~~~~l~~i~~l~l 394 (523)
.+++++.+|.|.++++.|. +. ........+..++.+++.++.|+++||+|||+.+. .+.+.++++.+++
T Consensus 236 ~~~~~~~~~~p~~~~~~g~---------s~-~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l 305 (402)
T TIGR00897 236 IGLFGFAVFLPMFVAELGF---------ST-SEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLAL 305 (402)
T ss_pred HHHHHHHHHHHHHHHHcCC---------Ch-hHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Confidence 3467788899999877544 34 34455556777889999999999999999888764 2333333333332
Q ss_pred HHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009862 395 VISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG 474 (523)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G 474 (523)
....... .+ ..+..++..++++.+.. ...+.. ..+.|..| +.|++++|+.+....++.+++|.+.+.+.+..|
T Consensus 306 ~~~~~~~-~~---~~~~~~~~~~~~G~~~~-~~~~~~-~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g 378 (402)
T TIGR00897 306 YYIPQHF-GH---SFAVALIIAIALGIFLA-GYVPLA-AVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG 378 (402)
T ss_pred HHHHHcc-CC---cHHHHHHHHHHHHHHHH-HHHHHH-HHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 2221110 00 11112222222222222 233333 33467655 589999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHhhe
Q 009862 475 LAGAFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 475 ~~~~f~i~~i~~~i~~v~~~~ 495 (523)
+...+++.+++.++..++.+|
T Consensus 379 ~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 379 AIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 988888888777776665544
No 79
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.27 E-value=1.9e-10 Score=124.84 Aligned_cols=170 Identities=16% Similarity=0.177 Sum_probs=115.0
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh-hCChH
Q 009862 300 KRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV-AGRRK 378 (523)
Q Consensus 300 ~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr-~GRR~ 378 (523)
++.++..++..++..+ ++|++..++|.++.+ ++|++... +...............+++|+++|| +|||+
T Consensus 20 p~~~~~~~~~~~~~~~-~~y~~~~~l~~yl~~--------~lg~s~~~-a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~ 89 (500)
T PRK09584 20 PKAFYLIFSIELWERF-GYYGLQGIMAVYLVK--------QLGMSEAD-SITLFSSFSALVYGLVAIGGWLGDKVLGTKR 89 (500)
T ss_pred CchHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--------HcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence 3556666666666555 478888899999865 45665543 3333434444444555789999999 59999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcch--hhHHHHHHHHHHH
Q 009862 379 LLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKV--RGICIAICAMAYW 456 (523)
Q Consensus 379 lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~--Rg~a~gi~~~~~~ 456 (523)
+++++.++.+++.+++.+..... ..+.+..++.++..+...+....+++|+||.+. |..++++.+++.+
T Consensus 90 ~~~~g~~~~~ig~~l~~~~~~~~---------~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~ 160 (500)
T PRK09584 90 VIMLGAIVLAIGYALVAWSGHDA---------GIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSIN 160 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhcccH---------HHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHH
Confidence 99999888877766655422110 112222223333333345555567899998643 4567888899999
Q ss_pred HHHHHHHHHHHHHHHhhCchhHHHHHHHHHHH
Q 009862 457 ICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFI 488 (523)
Q Consensus 457 lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i 488 (523)
+|.+++|.+.+++.+.+||++.|.+.++..++
T Consensus 161 iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 161 IGSFFSMLATPWLAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 99999999999999999999999876654443
No 80
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.27 E-value=1.1e-10 Score=122.40 Aligned_cols=162 Identities=14% Similarity=0.028 Sum_probs=112.6
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
+.......+|.++++ ++|.+. ....++.++..++.+++.++.|+++||+|||++++.+.++.+++.+.+.+
T Consensus 30 ~~~~~~~~l~~~i~~--------~~g~s~-~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~ 100 (399)
T PRK05122 30 TIGLPLAVLPGYVHD--------QLGFSA-FLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLL 100 (399)
T ss_pred HHHHHHHHHHHHHHH--------hcCccH-HHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHH
Confidence 355566677776544 345545 56677778888999999999999999999999999988877666554433
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
..... .........+++..++.++......+....++.|.+|.+.|++++++......+|.++++.+.+.+.+.+||+
T Consensus 101 ~~~~~--~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~ 178 (399)
T PRK05122 101 AGLLA--AWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLA 178 (399)
T ss_pred hhhhh--ccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHH
Confidence 22111 0000111223333344444444445555566689999999999999998999999999999999999999998
Q ss_pred hHHHHHHHHHHHH
Q 009862 477 GAFGVYAVVCFIS 489 (523)
Q Consensus 477 ~~f~i~~i~~~i~ 489 (523)
..+++..+++++.
T Consensus 179 ~~~~~~~~~~~~~ 191 (399)
T PRK05122 179 GLGLLIMLLALLG 191 (399)
T ss_pred HHHHHHHHHHHHH
Confidence 8776655554443
No 81
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.27 E-value=2.5e-10 Score=120.01 Aligned_cols=167 Identities=14% Similarity=0.087 Sum_probs=114.8
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
+++.+..|.|.++++.|. +. ........+..++.+++.++.+++.||+|||+.++++..+.+++.+++..
T Consensus 220 ~~~~~~~~lp~~l~~~g~---------s~-~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~ 289 (393)
T PRK09705 220 GYASLIAWLPAFYIEIGA---------SA-QYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIW 289 (393)
T ss_pred HHHHHHHHHHHHHHHcCC---------Ch-hhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Confidence 466788899999887544 33 45556667888999999999999999999999888876666555443332
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeeccc-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIF-PTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG- 474 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElf-P~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G- 474 (523)
..... . .. ...+....+ ....+.......+.+ |++.|++.+++.+....++..++|.+.+++.+..|
T Consensus 290 ~~~~~-------~--~~-~~~l~g~g~-g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~ 358 (393)
T PRK09705 290 LPLQL-------P--VL-WAMVCGLGL-GGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGN 358 (393)
T ss_pred ccchH-------H--HH-HHHHHHHhc-cchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 11100 0 11 111121122 222233333445555 46789999999999999999999999999999987
Q ss_pred chhHHHHHHHHHHHHHHHhheeccCCCCCC
Q 009862 475 LAGAFGVYAVVCFISWVFVFLRVPETKGMP 504 (523)
Q Consensus 475 ~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~ 504 (523)
+...+.+.++++++..+...++.|||+.+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 359 YLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred chHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 555566666666666666677789987754
No 82
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.27 E-value=1.1e-10 Score=120.80 Aligned_cols=165 Identities=21% Similarity=0.254 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHH
Q 009862 303 LLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLT 382 (523)
Q Consensus 303 ~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~ 382 (523)
++......++... .++.+..|.|.++++ .++.+. ........+..++.+++.++.++++||+|||+.++.
T Consensus 221 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------~~g~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 290 (394)
T TIGR00883 221 FLLGLGLVIATTT-TFYLITTYLPTYLTQ--------TLGLSA-NSALLVLMLSLILFFITIPLSGALSDRIGRRPVLII 290 (394)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHH--------hcCCCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 4444444444333 356677888988854 244444 445556667788889999999999999999998775
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHH-HHHHHHHHHH
Q 009862 383 TIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAIC-AMAYWICDII 461 (523)
Q Consensus 383 ~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~-~~~~~lG~ii 461 (523)
...+..++.+.+..... . .. ..+..++.. +..+++.....+....+++|.+|++.|+++.++. ++...+|..+
T Consensus 291 ~~~~~~~~~~~~~~~~~-~-~~---~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~ 364 (394)
T TIGR00883 291 FTVLAALLAVPLLMALL-D-SG---SFTLFFFLV-LGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGF 364 (394)
T ss_pred HHHHHHHHHHHHHHHHh-c-CC---chHHHHHHH-HHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhH
Confidence 55444333321111110 0 00 111222222 2222333333444557789999999999999985 4556688889
Q ss_pred HHHHHHHHHHhhC-chhHHHHHH
Q 009862 462 VTYTLPVMLSSIG-LAGAFGVYA 483 (523)
Q Consensus 462 g~~l~~~l~~~~G-~~~~f~i~~ 483 (523)
+|.+.+.+.+..| |...+++..
T Consensus 365 ~p~~~g~l~~~~g~~~~~~~~~~ 387 (394)
T TIGR00883 365 APYIAAALVAMTGDWYAIGYYLA 387 (394)
T ss_pred HHHHHHHHHHHcCcchhHHHHHH
Confidence 9999999999888 554443333
No 83
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.26 E-value=9.1e-11 Score=124.00 Aligned_cols=191 Identities=18% Similarity=0.092 Sum_probs=124.1
Q ss_pred cHHHHhccchhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 009862 290 SWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMK 369 (523)
Q Consensus 290 ~~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~ 369 (523)
.++.+++++..+.+++..++..+ +........|.+.++.+. +. ....+......++.+++.++.|+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---------s~-~~~g~~~~~~~l~~~~~~~~~G~ 74 (417)
T PRK10489 9 DLSLLKTHPAFRAVFIARFISIF----GLGLLGVAVPVQIQMMTG---------ST-LQVGLSVTLTGGAMFIGLMVGGV 74 (417)
T ss_pred HHHHHHhCCChhhHHHHHHHHHH----HHHHHHHHHHHHHHHHHC---------CH-HHHHHHHHHHHHHHHHHHHhhHH
Confidence 34555554444444444333322 234556677888776433 23 56677778889999999999999
Q ss_pred HHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHH
Q 009862 370 LMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIA 449 (523)
Q Consensus 370 LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~g 449 (523)
++||+|||++++++.++.+++.+.+....... ....+ .+++..++.+++.....+....++.+++|.+.|+++.+
T Consensus 75 l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~-~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (417)
T PRK10489 75 LADRYDRKKLILLARGTCGLGFIGLALNAFLP----EPSLL-AIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGA 149 (417)
T ss_pred HhhhcCCceEEEehHHHHHHHHHHHHHHHHcC----CCcHH-HHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHH
Confidence 99999999998887776666555443211100 00111 22222222222222223333456789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 450 ICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 450 i~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
+.++...+|.++++.+.+.+.+..+|++.+++.++..++..++ .+.+|++
T Consensus 150 ~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 199 (417)
T PRK10489 150 ITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLP-LLRLPAL 199 (417)
T ss_pred HHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 9999999999999999999999889988887766655554443 4456664
No 84
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.26 E-value=4.1e-10 Score=119.87 Aligned_cols=184 Identities=13% Similarity=0.022 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHH
Q 009862 302 ALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLL 381 (523)
Q Consensus 302 ~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll 381 (523)
+.+....+.+...|...+.+....+.+-+. +++++. .+..++.++..+.+.++.+..|++.||+|.|+++.
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~--------~~~ls~-~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~ 104 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKI--------GFNFTT-DQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTV 104 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--------hcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 444445555555554444444444454442 356666 45666666788888888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHH
Q 009862 382 TTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDII 461 (523)
Q Consensus 382 ~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~ii 461 (523)
++.++.++..+.+.+..... . .....++++.++.++.+. ..+.....++++||++.||+++|+....+++|..+
T Consensus 105 ~~~ll~~i~~~~~~~a~~~~----~-~s~~~lli~r~l~Gigg~-~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l 178 (462)
T PRK15034 105 FSTAILIIPCVWLGIAVQNP----N-TPFGIFIVIALLCGFAGA-NFASSMGNISFFFPKAKQGSALGINGGLGNLGVSV 178 (462)
T ss_pred HHHHHHHHHHHHHHHHHccc----C-CCHHHHHHHHHHHHHHHH-hHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHH
Confidence 98888877777666531100 0 011133333333333333 33445566799999999999999998888888888
Q ss_pred HHHHHHHHHH-----h-------------hCchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 462 VTYTLPVMLS-----S-------------IGLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 462 g~~l~~~l~~-----~-------------~G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
++.+.|.++. . .+++.+++++.++.++.+++.+++.++.
T Consensus 179 ~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 179 MQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred HHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 8888877552 2 2356666777777777777777666554
No 85
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.26 E-value=6.9e-11 Score=125.37 Aligned_cols=147 Identities=15% Similarity=0.087 Sum_probs=107.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
....++.++..++..++.+++|+++||+|||++++++.++.+++.++..+..... . ...+++..++.++....
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~r~l~G~~~~~ 143 (481)
T TIGR00879 71 SLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFAL------S-VEMLIVGRVLLGIGVGI 143 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcccc------c-hHHHHHHHHHHHhhhhH
Confidence 5566777788999999999999999999999999988888877766664432211 0 11233333444444444
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHH---HHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTL---PVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~---~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
..+....+++|.+|++.|++++++.++...+|.++++.+. ..+....+|++.|++.++..++ .++..+++||+.
T Consensus 144 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~-~~~~~~~l~~~~ 220 (481)
T TIGR00879 144 ASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGL-LFLGLFFLPESP 220 (481)
T ss_pred HHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH-HHHHHhcCCCCh
Confidence 4556667889999999999999999999999999999988 5555667899988885554444 444455578763
No 86
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.26 E-value=1.1e-10 Score=120.70 Aligned_cols=166 Identities=12% Similarity=0.053 Sum_probs=111.6
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHH-HHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLT-TIPVLIVSLIILV 395 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~-~~~l~~i~~l~l~ 395 (523)
+.......+|.++++ ++|.+. ....++.++..+..++..++.|+++||+|||+.++. +.++.+++.+++.
T Consensus 12 ~~~~~~~~l~~~l~~--------~~g~s~-~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 12 AGALQFPTLSLFLSE--------EVRARP-AMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHhhHHHHHHHc--------ccCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 345556667776654 355555 455666667778888889999999999998886554 4444444444444
Q ss_pred HHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHH--HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 396 ISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGIC--IAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a--~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
+..++. .+++..++.+.+.....|....+..|..|++.|+.+ .++......+|.++++.+.+.+.+..
T Consensus 83 ~~~~~~----------~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~ 152 (375)
T TIGR00899 83 WNRNYF----------LLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF 152 (375)
T ss_pred hcchHH----------HHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc
Confidence 332222 222222222333333445555566788887777654 57777788899999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 474 GLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 474 G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
+|++.|++.++++++..++.++++||.+
T Consensus 153 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 153 GFTVMFLTAALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 9999999988887777777666677754
No 87
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.26 E-value=1.8e-10 Score=121.08 Aligned_cols=150 Identities=11% Similarity=0.063 Sum_probs=116.3
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 398 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~ 398 (523)
+.+...+|.+.++++. +. ....+..+++.++..++.++.|+++||+|||++++.+..+.+++.+...+.+
T Consensus 26 ~~~~~~lp~i~~~~~~---------s~-~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~ 95 (393)
T PRK09705 26 TSVGPLLPQLRQASGM---------SF-SVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYP 95 (393)
T ss_pred hccchhHHHHHHHhCC---------CH-HHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCc
Confidence 4566778888887554 34 5677778888899999999999999999999999999999999999887766
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-Cchh
Q 009862 399 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI-GLAG 477 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~-G~~~ 477 (523)
++. .+++..++.++......+....++.+.+| +.|+.++++......+|..+++.+.+.+.+.. +|+.
T Consensus 96 ~~~----------~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~ 164 (393)
T PRK09705 96 QSA----------LLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQ 164 (393)
T ss_pred chH----------HHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 554 33444444444444444555566788887 77999999999999999999999999988875 7988
Q ss_pred HHHHHHHHHHHH
Q 009862 478 AFGVYAVVCFIS 489 (523)
Q Consensus 478 ~f~i~~i~~~i~ 489 (523)
.+.++++..++.
T Consensus 165 ~~~~~~~~~~~~ 176 (393)
T PRK09705 165 TLAWWALPAVVA 176 (393)
T ss_pred HHHHHHHHHHHH
Confidence 877665554433
No 88
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.25 E-value=1.3e-10 Score=123.93 Aligned_cols=172 Identities=12% Similarity=0.139 Sum_probs=108.2
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
..+++..|.|.++++. .|++. ....+...+..+..+++.+++++++||+++++....+.....+..+.+..
T Consensus 266 ~~~~~~~~~p~~l~~~--------~g~s~-~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 336 (438)
T TIGR00712 266 LRYGVLDWSPTYLKEV--------KHFAL-DKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIV 336 (438)
T ss_pred HHHHHHHhHHHHHHHc--------cCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHH
Confidence 4567788999999872 34444 44556666778889999999999999996543222222222111111111
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHH-HHHHHHHHHHHHhhCc
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICD-IIVTYTLPVMLSSIGL 475 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~-iig~~l~~~l~~~~G~ 475 (523)
.. .. ... ..+...+.++++ +....+........+.|.+|++.|++++|+++...++++ +++|.+.|.+.+..|+
T Consensus 337 ~~-~~-~~~--~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~ 411 (438)
T TIGR00712 337 YW-MN-PAG--NPLVDMICMIVI-GFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW 411 (438)
T ss_pred HH-hc-CCC--chHHHHHHHHHH-HHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccc
Confidence 00 00 000 111111111111 111111111112345799999999999999998888875 6899999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhheeccCCCC
Q 009862 476 AGAFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 476 ~~~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
...+.+.+++++++.++.+++.||.|+
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 412 DGGFMVMIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 889888888888888888887888763
No 89
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.25 E-value=1.7e-10 Score=121.47 Aligned_cols=184 Identities=9% Similarity=-0.045 Sum_probs=115.4
Q ss_pred chhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCCh
Q 009862 298 GVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRR 377 (523)
Q Consensus 298 ~~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR 377 (523)
..+|.+....+..++.++. .+....+.|.++++.|. +. ....+..+.+.++..++.+++|+++||+|||
T Consensus 10 ~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~g~---------s~-~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k 78 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTG-DGLEQGWLSPFLKALGL---------SP-QQSASAFTLYGIAAAISAWISGVVAEIIGPL 78 (402)
T ss_pred CCCchhhHHHHHHHHHHHh-hhhHHHhHHHHHHHhCC---------CH-HHhHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 3445555555555554443 44556677888776544 44 5666777788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHH
Q 009862 378 KLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWI 457 (523)
Q Consensus 378 ~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~l 457 (523)
++++.+.++.+++.+++...... .. .. ..+++..++.+.......+....++.+.+|++.|++++|+.++...+
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~~~~---~~--~~-~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 152 (402)
T TIGR00897 79 KTMMIGLLLWCVGHAAFIVFGLG---HA--NY-PLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSI 152 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc---Cc--cH-HHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99999888877765543221100 00 01 12222222222222222233334557889999999999999999999
Q ss_pred HH-HHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheecc
Q 009862 458 CD-IIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 458 G~-iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lp 498 (523)
|. ++++.+.+.+.+.+|+...++....+.++..++..++.+
T Consensus 153 g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 194 (402)
T TIGR00897 153 GIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNK 194 (402)
T ss_pred HHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccC
Confidence 96 578888888888888655544443333333333334344
No 90
>PRK03545 putative arabinose transporter; Provisional
Probab=99.24 E-value=5.9e-10 Score=116.77 Aligned_cols=159 Identities=15% Similarity=0.110 Sum_probs=102.6
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 398 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~ 398 (523)
+....|.|.++.+ ..|++. ....+...+..++.+++.++.++++||++||.+.+. ..+..++.+.+....
T Consensus 222 ~~~~~~~~~~l~~--------~~g~s~-~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~-~~~~~~~~~~l~~~~ 291 (390)
T PRK03545 222 FTAYSYIEPFVQQ--------VAGLSE-NFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIA-IALLLVCLLLLLPAA 291 (390)
T ss_pred HHHHHHHHHHHHH--------hcCCCc-cHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHHHHHHHHHHh
Confidence 3445566666655 244445 445555667788899999999999999998875443 333333332222111
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhH
Q 009862 399 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGA 478 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~ 478 (523)
. ..+...+..+++ +.......+.....+.+..| +.|++++|+++....+|..+++.+.|.+.+.+|++..
T Consensus 292 ~--------~~~~~~~~~~l~-g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~ 361 (390)
T PRK03545 292 N--------SEWHLSVLSIFW-GIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSI 361 (390)
T ss_pred c--------hHHHHHHHHHHH-HHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHH
Confidence 0 011122222222 22222333333345567766 5889999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHhheec
Q 009862 479 FGVYAVVCFISWVFVFLRV 497 (523)
Q Consensus 479 f~i~~i~~~i~~v~~~~~l 497 (523)
+.+.+++.++..++.++..
T Consensus 362 ~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 362 GYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 8888887777766665544
No 91
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.24 E-value=1.7e-10 Score=124.65 Aligned_cols=151 Identities=13% Similarity=0.088 Sum_probs=103.5
Q ss_pred hhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 321 VLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETL 400 (523)
Q Consensus 321 i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~ 400 (523)
+..++|.++++ .+|++. ....++.++..++.+++.+++|+++||+|||++++++.++..+..+++.....
T Consensus 294 ~~~~lp~~l~~--------~~g~~~-~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~- 363 (496)
T PRK03893 294 IQALLPTYLKT--------DLGYDP-HTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGG- 363 (496)
T ss_pred HHHHHHHHHHh--------hcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccc-
Confidence 45678888853 244445 45566667888899999999999999999999888776655544433221110
Q ss_pred hccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHH
Q 009862 401 QLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFG 480 (523)
Q Consensus 401 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~ 480 (523)
... ..+....++..++..+..++...++.|.+|++.|++++++.++...+|..++|.+.+.+.+.+|+...+.
T Consensus 364 ------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~ 436 (496)
T PRK03893 364 ------ANV-WVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALA 436 (496)
T ss_pred ------cHH-HHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHH
Confidence 011 1111222222223333344455677899999999999999999999999999999999999999887776
Q ss_pred HHHHHHHH
Q 009862 481 VYAVVCFI 488 (523)
Q Consensus 481 i~~i~~~i 488 (523)
+.++.+.+
T Consensus 437 ~~~~~~~~ 444 (496)
T PRK03893 437 SLSFSLTF 444 (496)
T ss_pred HHHHHHHH
Confidence 55544433
No 92
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.24 E-value=8e-11 Score=126.30 Aligned_cols=152 Identities=12% Similarity=-0.022 Sum_probs=116.8
Q ss_pred ccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHH
Q 009862 340 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIY 419 (523)
Q Consensus 340 ~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~ 419 (523)
+++++. ....++...+.++++++.+++|+++||+|||+++.++.++.+++.+++.+..... ...+++..++
T Consensus 70 ~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~r~~ 140 (465)
T TIGR00894 70 NFKWSG-ALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGG--------IALVVFCRVI 140 (465)
T ss_pred CCCCCH-HHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcC--------chHHHHHHHH
Confidence 456666 4556667788899999999999999999999999988887777665543321110 1234444555
Q ss_pred HHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCchhHHHHHHHHHHHHHHHhheecc
Q 009862 420 FCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS-IGLAGAFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 420 ~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~-~G~~~~f~i~~i~~~i~~v~~~~~lp 498 (523)
.++......+....+++|.+|++.|++++++.+....+|.++++.+.+.+.+. .+|+..|.+.+++.++..++.+++.+
T Consensus 141 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 220 (465)
T TIGR00894 141 QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPA 220 (465)
T ss_pred HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhc
Confidence 55666666677777889999999999999999999999999999999999988 49999999888887777666665555
Q ss_pred CC
Q 009862 499 ET 500 (523)
Q Consensus 499 Et 500 (523)
+.
T Consensus 221 ~~ 222 (465)
T TIGR00894 221 DD 222 (465)
T ss_pred CC
Confidence 43
No 93
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.23 E-value=2.8e-10 Score=121.06 Aligned_cols=177 Identities=10% Similarity=0.031 Sum_probs=115.8
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchh--hHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSES--ASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIIL 394 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~--~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l 394 (523)
....+.+..|.+.++++. .+.+... ..........++..++.+++|+++||+|||++++++.++++++.+++
T Consensus 37 d~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~ 110 (432)
T PRK10406 37 DFYVYSFCSLYFAHIFFP------SGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI 110 (432)
T ss_pred HHHHHHHHHHHHHHHhCC------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 355566666767666431 0122211 12222334455666999999999999999999999999998888877
Q ss_pred HHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH----
Q 009862 395 VISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVML---- 470 (523)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~---- 470 (523)
++.+++. ... ......+++..++.++...+..+....+++|.+|++.|++..++.......|.++++.+.+.+.
T Consensus 111 ~~~~~~~-~~~-~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 188 (432)
T PRK10406 111 ACLPGYE-TIG-TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLE 188 (432)
T ss_pred hhcCCch-hHH-HHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6654432 000 0112234445555555555666777788899999999999999888777788777776655543
Q ss_pred ----HhhCchhHHHHHHHHHHHHHHHhheeccCCCC
Q 009862 471 ----SSIGLAGAFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 471 ----~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
..+||+..|++.++.+++. ++....+||++.
T Consensus 189 ~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~~ 223 (432)
T PRK10406 189 DAELREWGWRIPFALGAVLAVVA-LWLRRQLDETSQ 223 (432)
T ss_pred HHHHhccchHHHHHHHHHHHHHH-HHHHhcCCCCch
Confidence 2579999998766655544 333445677643
No 94
>PRK15075 citrate-proton symporter; Provisional
Probab=99.23 E-value=2.7e-10 Score=121.28 Aligned_cols=171 Identities=12% Similarity=0.037 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHH-----HHHHHHHHHHHHHHHHHHhhCCh
Q 009862 303 LLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISA-----FTTFLMLPCIGVAMKLMDVAGRR 377 (523)
Q Consensus 303 ~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~-----i~~l~~lig~~l~g~LsDr~GRR 377 (523)
....+++..+..+.....+.+..|.+.++++. +..+...+... ...+...++.++.|+++||+|||
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr 86 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFP---------AGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR 86 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------CCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH
Confidence 34444444444444567788888988887543 33232222211 12233357889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHH
Q 009862 378 KLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWI 457 (523)
Q Consensus 378 ~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~l 457 (523)
++++.+.++.+++.+++.+.+++.... .. ....+++..++.++......+....+++|++|++.|++++++.....++
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~~~~~-~~-~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~ 164 (434)
T PRK15075 87 KGLIVTLSIMASGTLLIAFVPGYATIG-LA-APLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQV 164 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHH-HH-HHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHH
Confidence 999999998888888777654433000 00 0012233333444333333444456789999999999999999988888
Q ss_pred HHHHHHHHHHHHH--------HhhCchhHHHHHHH
Q 009862 458 CDIIVTYTLPVML--------SSIGLAGAFGVYAV 484 (523)
Q Consensus 458 G~iig~~l~~~l~--------~~~G~~~~f~i~~i 484 (523)
|..+++.+.+.+. ..+||++.|++.++
T Consensus 165 g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 165 AVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 8888777776653 46799988876443
No 95
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.23 E-value=3.4e-10 Score=117.93 Aligned_cols=143 Identities=16% Similarity=0.117 Sum_probs=97.9
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 398 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~ 398 (523)
.....+.|.++.+ ++|++. ....++..+..++.+++.++.++++||+|||+.+.++.++.++..+.+....
T Consensus 255 ~~~~~~~~~~~~~--------~~g~s~-~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 325 (405)
T TIGR00891 255 HPIQDLLPTYLKA--------DLGLSP-HTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIG 325 (405)
T ss_pred hhhhhhhHHHHHH--------HhCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhC
Confidence 4556677888765 245555 4555566678889999999999999999999988877665533322221110
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-chh
Q 009862 399 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG-LAG 477 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G-~~~ 477 (523)
. ..+ .+.+..++..++..+..++...+++|.+|++.|++++|+.+...++|..++|.+.+.+.+..| +..
T Consensus 326 ~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~ 396 (405)
T TIGR00891 326 A--------NVA-VLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGT 396 (405)
T ss_pred C--------chH-HHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 0 111 122221222233333444555677999999999999999999999999999999999999988 544
Q ss_pred HH
Q 009862 478 AF 479 (523)
Q Consensus 478 ~f 479 (523)
.+
T Consensus 397 ~~ 398 (405)
T TIGR00891 397 AL 398 (405)
T ss_pred hH
Confidence 43
No 96
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.23 E-value=6e-10 Score=116.85 Aligned_cols=162 Identities=12% Similarity=0.117 Sum_probs=108.9
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
+..+..|.|.++.+.+. + .......+..++.+++.++.+++.||+|||+.+..+.++.+++.+++...
T Consensus 232 ~~~~~~~~~~~~~~~~~---------~---~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 299 (399)
T PRK05122 232 FGTIATFITLYYAARGW---------D---GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA 299 (399)
T ss_pred HHHHHHHHHHHHHHccc---------c---cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh
Confidence 34556677777765432 1 22233456677788899999999999999998887777666665554432
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
.+. +..++..++++.+++ ...+.....+.|.+|++.|++++++.+....+|..+++.+.+.+.+..|++.
T Consensus 300 ~~~---------~~~~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 369 (399)
T PRK05122 300 PSP---------WMALIGAALTGFGFS-LVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPS 369 (399)
T ss_pred ccH---------HHHHHHHHHHHHhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 221 122222222222222 2233333445688999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHhheeccCCCC
Q 009862 478 AFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
.+.+.++++++..++.++ +++.++
T Consensus 370 ~~~~~~~~~~~~~~~~~~-~~~~~~ 393 (399)
T PRK05122 370 IFLAAALAALLGLALTWL-LYRRAP 393 (399)
T ss_pred HHHHHHHHHHHHHHHHHH-hccccc
Confidence 888877777766555544 444433
No 97
>PRK03699 putative transporter; Provisional
Probab=99.22 E-value=3.3e-10 Score=118.99 Aligned_cols=159 Identities=9% Similarity=0.067 Sum_probs=106.6
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
+.+.+..|.|.++++ .+|++. ........+..++.+++.++.++++||++||++++....+.++.++++..
T Consensus 220 ~~~~~~~~~p~~l~~--------~~g~s~-~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~ 290 (394)
T PRK03699 220 AQLTFISWVPEYAQK--------KFGMSL-EDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVN 290 (394)
T ss_pred HHHHHHHHHHHHHHH--------HcCCCh-HHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 456778899999965 245555 44555666777888999999999999999999888766655554443322
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
..+.. ...+.. +..+++..+..+....+..+..|. .++...++...+..+|.+++|.+.+++.+..|++
T Consensus 291 ~~~~~---------~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~ 359 (394)
T PRK03699 291 TDDPS---------HLLYAI-LGLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQ 359 (394)
T ss_pred cCCch---------HHHHHH-HHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCch
Confidence 11111 112222 222222223333333445566654 4677888998999999999999999999999998
Q ss_pred hHHHHHHHHHHHHHHHhhe
Q 009862 477 GAFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 477 ~~f~i~~i~~~i~~v~~~~ 495 (523)
..+++.+++++++.+.+.+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~ 378 (394)
T PRK03699 360 AALLTANGLYAVVFVMCIL 378 (394)
T ss_pred hhhhhhHHHHHHHHHHHHH
Confidence 8888777777666554433
No 98
>TIGR00898 2A0119 cation transport protein.
Probab=99.22 E-value=1.5e-10 Score=125.38 Aligned_cols=140 Identities=17% Similarity=0.093 Sum_probs=110.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
....+..++..++.+++.++.|+++||+|||++++++.++.+++.++..+..++. .+++..++.++...+
T Consensus 127 ~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~----------~~~~~r~l~G~~~~~ 196 (505)
T TIGR00898 127 WKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYT----------VFLVFRLLVGMGIGG 196 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHH----------HHHHHHHHHHhhccc
Confidence 4566777888999999999999999999999999999888888877776554443 444555555566666
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
..++..+++.|++|.+.|+.+.++..+...+|.++++.+...+.+ |++.+++.++.+++..++. +++||+
T Consensus 197 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~es 266 (505)
T TIGR00898 197 IWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPES 266 (505)
T ss_pred hHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCCC
Confidence 677777888999999999999999988888998888887765544 8888888877766665554 567886
No 99
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.22 E-value=4.1e-10 Score=119.15 Aligned_cols=157 Identities=15% Similarity=0.081 Sum_probs=100.2
Q ss_pred HHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHH-HHHHHHHHH
Q 009862 311 ILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLL-LTTIPVLIV 389 (523)
Q Consensus 311 ~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ll-l~~~~l~~i 389 (523)
+++...+++.+..|+|.++++.+ .+++. ...........++.+++.++.++++||++||+.. +...++.++
T Consensus 251 ~~~~~~~~~~~~~~~p~~l~~~~-------~~~s~-~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~ 322 (412)
T TIGR02332 251 YFCLTNTLSAINIWTPQILQSFN-------QGSSN-IMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAA 322 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-------CCCcH-HHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHH
Confidence 33444457788999999998742 23333 4455567788888999999999999999977643 333333332
Q ss_pred HHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 390 SLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVM 469 (523)
Q Consensus 390 ~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l 469 (523)
.+ ++... . .. ....++.+.+ .++......++.+....|.+|++.|++++|+++...++|++++|.+.+.+
T Consensus 323 ~~-~~~~~--~--~~----~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i 392 (412)
T TIGR02332 323 GW-LLASA--T--DH----NLIQLLGIIM-ASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGIL 392 (412)
T ss_pred HH-HHHHh--c--CC----HHHHHHHHHH-HHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccc
Confidence 22 21111 1 01 0111111111 11111122233445557889999999999999999999999999999999
Q ss_pred HHhhC-chhHHHHHHHH
Q 009862 470 LSSIG-LAGAFGVYAVV 485 (523)
Q Consensus 470 ~~~~G-~~~~f~i~~i~ 485 (523)
.+..| |...+++.+++
T Consensus 393 ~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 393 KDATGSFNSGLWFVAAL 409 (412)
T ss_pred cccCCCCchhHHHHHHH
Confidence 99875 77776655543
No 100
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.21 E-value=6e-10 Score=113.08 Aligned_cols=160 Identities=21% Similarity=0.299 Sum_probs=124.2
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChH-HHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRK-LLLTTIPVLIVSLIILV 395 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~-lll~~~~l~~i~~l~l~ 395 (523)
..+....+.|.++++. ++.+. ........+..++.+++.++.++++||+|||+ .+..+.++..++.+.+.
T Consensus 190 ~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 260 (352)
T cd06174 190 GYYGLLTYLPLYLQEV--------LGLSA-AEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA 260 (352)
T ss_pred HHHHHHHHHHHHHHHh--------cCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 4567777888887763 23434 55666777888999999999999999999999 88888888777777665
Q ss_pred HHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 009862 396 ISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGL 475 (523)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~ 475 (523)
...+. .......++.++......+....++.|.+|++.|++.+++.+...+++..+++.+.+.+.+..++
T Consensus 261 ~~~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~ 330 (352)
T cd06174 261 LAPSL----------ALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGY 330 (352)
T ss_pred HhccH----------HHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCc
Confidence 43321 13333444444555555677778889999999999999999999999999999999999998999
Q ss_pred hhHHHHHHHHHHHHHHHhhe
Q 009862 476 AGAFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 476 ~~~f~i~~i~~~i~~v~~~~ 495 (523)
+..+.+.+++.++..++.++
T Consensus 331 ~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 331 GGVFLILAALALLAALLLLL 350 (352)
T ss_pred chHHHHHHHHHHHHHHHhee
Confidence 98888888888777665543
No 101
>PRK12382 putative transporter; Provisional
Probab=99.21 E-value=7.4e-10 Score=115.91 Aligned_cols=157 Identities=14% Similarity=0.067 Sum_probs=109.2
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
+..+..|.|.++++.+. + ...+......++.+++.++.+++.||+|||+.+..+..+.+++.+++.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~---------~---~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 299 (392)
T PRK12382 232 FAVIGTFVSLYFASKGW---------A---MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA 299 (392)
T ss_pred HhHHHHHHHHHHHhcCC---------c---hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc
Confidence 44556777777776443 1 22334445667778899999999999999999888777766665544432
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
.+. +...+...+...+.+ ...+.....+.+.+|++.|+++.|+.++...+|..+++.+.+.+.+..||+.
T Consensus 300 ~~~---------~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~ 369 (392)
T PRK12382 300 PTA---------WVALAGAALTGAGCS-LIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPS 369 (392)
T ss_pred ccH---------HHHHHHHHHHHHHHH-hHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH
Confidence 211 112222222222222 2233344556788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhee
Q 009862 478 AFGVYAVVCFISWVFVFLR 496 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~ 496 (523)
.|.+.+++.++..++..++
T Consensus 370 ~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 370 VFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9988887777766665543
No 102
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.21 E-value=4.6e-10 Score=118.98 Aligned_cols=155 Identities=12% Similarity=0.114 Sum_probs=97.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhcc
Q 009862 348 ASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAY 427 (523)
Q Consensus 348 ~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 427 (523)
....+..+..++.+++.+++++++||+|||+++.++.++.+++.+.+.+... ..+..++ ..++.++.....
T Consensus 258 ~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~g~~~~~~ 328 (437)
T TIGR00792 258 LFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGS--------NLPLILV-LIILAGFGQNFV 328 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcch--------hHHHHHH-HHHHHHHHHHHH
Confidence 3344555667888999999999999999999998887777666554433210 1111222 222222222333
Q ss_pred ccccceeeecccC-------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh--------------HHHHHHHHH
Q 009862 428 GPIPNILCAEIFP-------TKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG--------------AFGVYAVVC 486 (523)
Q Consensus 428 ~~i~~~~~aElfP-------~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~--------------~f~i~~i~~ 486 (523)
.+..+++.+|..+ .+.+|+..|+.+++..+|..+++.+.+.+.+..|+.. .+.+..+++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~~~~~~~~~~~~~~~~~~~~~p~i~ 408 (437)
T TIGR00792 329 TGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYVANAAQSPITLNGIKILMFAVPALF 408 (437)
T ss_pred HHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCCHHHHHHHHHHHHHHHHHH
Confidence 4555566677654 5678999999999999999999999999998876531 233444444
Q ss_pred HHHHHHhhe-eccCCCCCCHHHHHHHH
Q 009862 487 FISWVFVFL-RVPETKGMPLEVITEFF 512 (523)
Q Consensus 487 ~i~~v~~~~-~lpEtk~~~le~i~~~~ 512 (523)
.++.++... +.|.++.+ .+++.+.+
T Consensus 409 ~~~~~~~~~~~y~l~~~~-~~~i~~~l 434 (437)
T TIGR00792 409 LLLAAIIIGRFYKLTEKK-HAEIVEEL 434 (437)
T ss_pred HHHHHHHHHHHeeCcHHH-HHHHHHHH
Confidence 444444443 56666443 33444443
No 103
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.20 E-value=4.4e-10 Score=121.31 Aligned_cols=157 Identities=15% Similarity=0.042 Sum_probs=89.4
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChH-------HHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRK-------LLLTTIPVLIVS 390 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~-------lll~~~~l~~i~ 390 (523)
.+.+..|.|.++.+ .+|++. ..+.....+..++.+++.+++|+++||++||+ ++.+..++.+++
T Consensus 268 ~~~~~~~~p~~l~~--------~~g~s~-~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~ 338 (476)
T PLN00028 268 ELTMDNIIAEYFYD--------RFGLSL-ETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVF 338 (476)
T ss_pred HHHHHhHHHHHHHH--------hcCCCH-HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHH
Confidence 34566778888765 245554 45566777888999999999999999998762 222222222222
Q ss_pred HHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 391 LIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVML 470 (523)
Q Consensus 391 ~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~ 470 (523)
++++... . +.+..++.++++..+...+ .+..+.++.++.| +.|+++.|+.+..+++|+++++.+.+ ..
T Consensus 339 ~~~~~~~------~---~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~ 406 (476)
T PLN00028 339 CIWLGRA------N---SLGAAIVVMILFSIFVQAA-CGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TG 406 (476)
T ss_pred HHHhccc------c---hHHHHHHHHHHHHHHHHHh-hhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hc
Confidence 2211111 1 1111222222222222222 2233345566654 68999999988877777777776543 11
Q ss_pred HhhCchhHHHHHHHHHHHHHHHhhe
Q 009862 471 SSIGLAGAFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 471 ~~~G~~~~f~i~~i~~~i~~v~~~~ 495 (523)
...+|...|++.+++.++++++.++
T Consensus 407 ~~~~y~~~f~~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 407 SSYSTETGISLMGVMIIACTLPVAF 431 (476)
T ss_pred CCccHhhHHHHHHHHHHHHHHHHHh
Confidence 2235777887777776666555544
No 104
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.19 E-value=8.7e-10 Score=118.50 Aligned_cols=186 Identities=12% Similarity=0.128 Sum_probs=127.1
Q ss_pred HHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCCh--HHHHHHH
Q 009862 307 VGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRR--KLLLTTI 384 (523)
Q Consensus 307 ~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR--~lll~~~ 384 (523)
+++..+....+++.+......|..+ .+|++. .....+..+..+..++|+++++++.||+|.| +++++++
T Consensus 286 fLia~~l~~dg~~ti~~~~~i~a~~--------~lg~s~-~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l 356 (477)
T PF11700_consen 286 FLIAYFLYSDGVNTIISFAGIYATE--------VLGMST-TQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISL 356 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------hcCcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 3334444445677777777777765 466666 4566666788899999999999999999988 7777666
Q ss_pred HHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHH
Q 009862 385 PVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTY 464 (523)
Q Consensus 385 ~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~ 464 (523)
++..+..+...+..... .....+.+ .+.++.++.+.+.++..+...++.+|+.|+...+..+|++.+..+..++++|.
T Consensus 357 ~~~~~i~~~g~~G~~~~-~~g~~~~~-~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPl 434 (477)
T PF11700_consen 357 ILWIIIPLYGLFGFWPS-FFGLKSPW-EFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPL 434 (477)
T ss_pred HHHHHHHHHHHHHhhhc-ccCcccHH-HHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 65533333222100000 00111122 24444445566666777778888899999999999999999999999999999
Q ss_pred HHHHHHHhhC-chhHHHHHHHHHHHHHHHhheeccCCCCCC
Q 009862 465 TLPVMLSSIG-LAGAFGVYAVVCFISWVFVFLRVPETKGMP 504 (523)
Q Consensus 465 l~~~l~~~~G-~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~ 504 (523)
+.+.+.+..| .+..+....++.++..+ ++++++..|++.
T Consensus 435 l~g~i~~~tg~~r~g~~~l~~lf~~gl~-ll~~v~~~~g~~ 474 (477)
T PF11700_consen 435 LFGLITDATGSQRYGFLFLLVLFLIGLI-LLFFVDVEKGRE 474 (477)
T ss_pred HHHHHHHHhCCchhHHHHHHHHHHHHHH-HHhhccchhhhh
Confidence 9999999987 55555555555544444 445677777654
No 105
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.19 E-value=7.7e-10 Score=116.55 Aligned_cols=177 Identities=15% Similarity=0.154 Sum_probs=129.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHH
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLL 380 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ll 380 (523)
+..++.|+..|+..+ -..+.+..|.+.++ +|++.......+..++..+++++.++.|+++||+|-|+++
T Consensus 27 ~~~~~lC~fGF~~e~--R~n~s~a~p~L~~e---------lglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL 95 (511)
T TIGR00806 27 VLVLYLCFYGFMAQF--RPGESFITPYLLTV---------LNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL 95 (511)
T ss_pred HHHHHHHHHHHHHHh--hchHHHHHHHHHHH---------cCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH
Confidence 455556666666555 24455566666665 5555544366777888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHH
Q 009862 381 LTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDI 460 (523)
Q Consensus 381 l~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~i 460 (523)
.++.+..+++.+++.+...+. .+.++.++.+.+.++.. ..+.++...+|++.|+++.|+++....+|.+
T Consensus 96 ~l~~l~Wsl~t~L~~fa~Sl~----------~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~ 164 (511)
T TIGR00806 96 VLQALSFVCVWLLLLLGTSVW----------HMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVF 164 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888887765443 45555555555554444 5567789999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCchhHHHH--HHHHHHHHHHHhheeccCC
Q 009862 461 IVTYTLPVMLSSIGLAGAFGV--YAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 461 ig~~l~~~l~~~~G~~~~f~i--~~i~~~i~~v~~~~~lpEt 500 (523)
+++.+.+. +..+||+....+ +...+.+++++..+++|..
T Consensus 165 Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~ 205 (511)
T TIGR00806 165 LSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRP 205 (511)
T ss_pred HHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999 567788875443 3334445555556667743
No 106
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.19 E-value=6e-10 Score=117.14 Aligned_cols=140 Identities=11% Similarity=0.067 Sum_probs=103.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
....++...+.+...++.+++|+++||+|||++++++.++.+++.+++.+..+ .++..++.+.....
T Consensus 38 ~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~-------------~~~~r~l~G~~~a~ 104 (393)
T PRK11195 38 WSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIH-------------PLLAYGLVGIGAAA 104 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHH
Confidence 45667777888999999999999999999999999998888776655433211 12233445556666
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
..|...+++.|++|++.|+++.++..+...++.+++|.+++.+.+.. +...+.+.+.+.+ ..++..+++||.+
T Consensus 105 ~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~-~~~~~~~~l~~~~ 177 (393)
T PRK11195 105 YSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYL-LAALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHhcCCCCc
Confidence 77777788899999999999999999999999999999999998864 5444444433332 3334445677653
No 107
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.18 E-value=5.6e-10 Score=132.87 Aligned_cols=147 Identities=14% Similarity=0.007 Sum_probs=102.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
....+..+++.+..+++.+++|+++||+|||+++.....+.+++.+...+.... .....++++.++.++....
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~-------~s~~~l~~~~~l~gi~~a~ 124 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHL-------NSVPLLFAALFLMGIHSAL 124 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHH-------hhHHHHHHHHHHHHHHHHh
Confidence 345566667888889999999999999999997644222222221111111000 0112445555566666667
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
+.|...+++.+++|.+.|+.++|+.++...+|.+++|.+++++....+|+..| +..++..+.++++.+++|+++
T Consensus 125 ~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 125 FGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV-ALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred hchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH-HHHHHHHHHHHHHHhhCCCCC
Confidence 77888888999999999999999999999999999999999999999998777 444444444444555566553
No 108
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.17 E-value=1.4e-09 Score=117.80 Aligned_cols=166 Identities=10% Similarity=-0.021 Sum_probs=104.4
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLIS-AFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~-~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
.....+.+.++.+ .+|++.. ...... .+..++.+++.+++|+++||+|||+.++++.++.+++.+++...
T Consensus 239 ~~~~~~~~~~l~~--------~~G~s~~-~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l 309 (491)
T PRK11010 239 AFAMSLTTTFLIR--------GVGFDAG-EVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLL 309 (491)
T ss_pred HHHHHHHHHHHHH--------hcCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444566666543 2455553 344443 45567889999999999999999887776555444443322211
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
.. .. .+.+.....+++...+++.+..+ .+++..++.|.+.+++.+++.+....+|.++++.+.|.+.+.+||..
T Consensus 310 ~~---~~--~~~~~l~~~~~l~~~~~g~~~~~-~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~ 383 (491)
T PRK11010 310 SI---TD--KNLYSMGAAVFFENLCGGMGTAA-FVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPT 383 (491)
T ss_pred Hh---cc--ccHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 11 00 01111122222222222222222 24566788999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHhheeccCC
Q 009862 478 AFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
.|.+.++++++..++..+ ++++
T Consensus 384 ~f~~~~~~~l~~l~~~~~-~~~~ 405 (491)
T PRK11010 384 FYLFSVAAAVPGLLLLLV-CRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHH-HHhc
Confidence 787777777666555544 3443
No 109
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.17 E-value=4e-10 Score=122.84 Aligned_cols=141 Identities=15% Similarity=0.141 Sum_probs=122.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
....+..+++.++.++|.+++|.++||+|||+++++++++.+++.++.++..++. .++++.++.+++..+
T Consensus 118 ~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~----------~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 118 TLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYW----------MFLIFRFLSGFFGSG 187 (521)
T ss_pred hHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHH----------HHHHHHHHHHhhccc
Confidence 4566777888999999999999999999999999999999999998888877776 778888888888888
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
...+.+.+++|+++++.|+.+..+ ..+.+.++.+++.+.+++.. +|++.+++..+..++..++ +++.||++
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 888888999999999999999999 88889999999998888887 8999988888887776666 55566763
No 110
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.17 E-value=7.9e-10 Score=115.48 Aligned_cols=152 Identities=13% Similarity=-0.023 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHH
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLL 380 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ll 380 (523)
+.++..++..++. ..+...+..++|.++++.|. +. ....++.+...++..++.++.|+++||+|||+++
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~lp~~~~~~~~---------s~-~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~ 74 (381)
T PRK03633 6 RPVLLLLCGLLLL-TLAIAVLNTLVPLWLAQEHL---------PT-WQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSY 74 (381)
T ss_pred HHHHHHHHHHHHH-HHhhhhHHHHHHHHHHHcCC---------CH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3444444443333 33456777889999988554 33 6777888888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHH
Q 009862 381 LTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDI 460 (523)
Q Consensus 381 l~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~i 460 (523)
..+.++.+++.+.+.+..++. .+++..++.++......+.....+.+..|.+.|++++++......+|..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~----------~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 144 (381)
T PRK03633 75 YLASLIFAAGCAGLGLMVGFW----------SWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTV 144 (381)
T ss_pred HHHHHHHHHHHHHHHHhccHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 998888887777665544333 2333334433333333344334446778888999999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 009862 461 IVTYTLPVMLSSI 473 (523)
Q Consensus 461 ig~~l~~~l~~~~ 473 (523)
+++.+.+.+.+..
T Consensus 145 ~g~~~~~~l~~~~ 157 (381)
T PRK03633 145 LGQLLVSKVSTEL 157 (381)
T ss_pred HHHHHHhcccccc
Confidence 9999998887653
No 111
>PRK09952 shikimate transporter; Provisional
Probab=99.17 E-value=7.8e-10 Score=117.98 Aligned_cols=144 Identities=14% Similarity=0.064 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhcccccccee
Q 009862 355 FTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNIL 434 (523)
Q Consensus 355 i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~ 434 (523)
+..++..++.++.|+++||+|||++++++.++.+++.+++.+.+++. ... ......+++..++.++...+..+....+
T Consensus 72 ~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~l~~~R~l~G~~~g~~~~~~~~~ 149 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFS-TIG-WWAPVLLVTLRAIQGFAVGGEWGGAALL 149 (438)
T ss_pred HHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHH-HHH-HHHHHHHHHHHHHHHhhhcccHHHHHHH
Confidence 34456778889999999999999999999999988888877655543 100 1111223444455555555555555678
Q ss_pred eecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------hhCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 435 CAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS--------SIGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 435 ~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~--------~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
++|.+|++.|+...+.......+|.+++..+...+.. .+||+..|++.++..++ .++....+||++
T Consensus 150 ~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~-~~~l~~~~~es~ 223 (438)
T PRK09952 150 AVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI-ALWVRNGMEESA 223 (438)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH-HHHHHHhCCCCh
Confidence 8999999999999999988888888888777666553 46899888876665443 333334466664
No 112
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.17 E-value=6.3e-10 Score=116.64 Aligned_cols=138 Identities=17% Similarity=0.108 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccc
Q 009862 351 LISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPI 430 (523)
Q Consensus 351 l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i 430 (523)
.+..+..++.+++.++.++++||+|||+++..+.++.+++.+.+...... +. +++..++.+++.....+.
T Consensus 262 ~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~g~~~~~~~~~ 331 (408)
T PRK09874 262 MIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTP---------LQ-LGILRFLLGAADGALLPA 331 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccH---------HH-HHHHHHHHHhhhHhhHHH
Confidence 33445567778888899999999999999888777666555444322211 11 222222222233333344
Q ss_pred cceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheecc
Q 009862 431 PNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 431 ~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lp 498 (523)
...++.+..|.+.|++.+++.+.+..+|..++|.+.+.+.+..|++..|.+.+++.++..++.++..+
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 332 VQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455677888999999999999999999999999999999999999998888888777776655443
No 113
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.16 E-value=3.1e-09 Score=111.19 Aligned_cols=153 Identities=17% Similarity=0.138 Sum_probs=108.4
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
+......|.|.++++.|. +. ........+..+..+++.++++++.||+|+|++++++.++.++..+.+.+
T Consensus 220 ~~~~~~~~~~~~l~~~g~---------s~-~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~ 289 (382)
T TIGR00902 220 AHAAYYGFSAIYWQAAGI---------SA-SATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGA 289 (382)
T ss_pred HHHHHHHHHHHHHHHCCC---------CH-hHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 355666788888877544 44 44455566788889999999999999999999999888888887776655
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHH-HHHHHHHHHHHHHHHHHHHhhCc
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICA-MAYWICDIIVTYTLPVMLSSIGL 475 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~-~~~~lG~iig~~l~~~l~~~~G~ 475 (523)
..+.. ..+...++....++... +....++.+. |.+.|+++.++++ ....+|.++++.+.|.+.+.+|.
T Consensus 290 ~~~~~---------~~~~~q~l~g~~~~~~~-~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~ 358 (382)
T TIGR00902 290 IEAFP---------LIFLLQILHCGTFAVCH-LAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA 358 (382)
T ss_pred HhhHH---------HHHHHHHHHHHHHHHHH-HHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 44332 22333333333443333 3344566777 9999999999986 45679999999999999999985
Q ss_pred hhHHHHHHHHHHHHHH
Q 009862 476 AGAFGVYAVVCFISWV 491 (523)
Q Consensus 476 ~~~f~i~~i~~~i~~v 491 (523)
..|++.+++.++..+
T Consensus 359 -~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 359 -GTFVFMAIIAAAAFF 373 (382)
T ss_pred -HHHHHHHHHHHHHHH
Confidence 566666666655433
No 114
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.15 E-value=1.8e-09 Score=114.33 Aligned_cols=165 Identities=8% Similarity=-0.007 Sum_probs=114.4
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
........|.+.++++ ++. ....++.+...++.+++.++.+++.||+|||++++++.++++++.+++...
T Consensus 19 ~~~~~~l~~~~~~~~~---------~s~-~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~ 88 (410)
T TIGR00885 19 NDITNPMVPQFQQAFT---------LTA-FQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPA 88 (410)
T ss_pred HHhHHHHHHHHHHHhC---------CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 3444566777766644 444 567778889999999999999999999999999999998888877664332
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS----- 472 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~----- 472 (523)
.... .+..++...++.++......+....++.++.|++.|++.+++.+.+..+|..+++.+.+.+...
T Consensus 89 ~~~~-------~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~ 161 (410)
T TIGR00885 89 AEIM-------NYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQ 161 (410)
T ss_pred Hhhc-------cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 1110 1112333333333333333344445667888999999999999999999999999998877532
Q ss_pred ---------------------hCchhHHHHHHHHHHHHHHHhh-eeccC
Q 009862 473 ---------------------IGLAGAFGVYAVVCFISWVFVF-LRVPE 499 (523)
Q Consensus 473 ---------------------~G~~~~f~i~~i~~~i~~v~~~-~~lpE 499 (523)
.+|+.+|.+.+++.++..++.. ...|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~ 210 (410)
T TIGR00885 162 SQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPA 210 (410)
T ss_pred hhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3588888887776666554443 33565
No 115
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.14 E-value=9.7e-11 Score=118.25 Aligned_cols=144 Identities=13% Similarity=0.072 Sum_probs=108.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
..+..+.+.+.+..+++++.+|.++||+|||+++++|++..+++.++.+...++. .++...+..+++..-
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~----------afv~aR~l~Gi~kgn 137 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFA----------AFVLARFLGGIFKGN 137 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHhhhhccCc
Confidence 4566777888999999999999999999999999999999988888777665543 344445666666555
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH---hhCchhHHH---HHHHHHHHHHHHhheeccCC
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS---SIGLAGAFG---VYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~---~~G~~~~f~---i~~i~~~i~~v~~~~~lpEt 500 (523)
.+. ..++++|+++.+.|+.+++.++..+.+|.++||.+++++.. ..|..+.++ +..+.......+..+++|||
T Consensus 138 l~v-~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 138 LSV-IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred hHH-HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 444 45788999999999999999999999999999999999987 444333222 12222222234456678998
Q ss_pred C
Q 009862 501 K 501 (523)
Q Consensus 501 k 501 (523)
-
T Consensus 217 L 217 (451)
T KOG2615|consen 217 L 217 (451)
T ss_pred c
Confidence 3
No 116
>TIGR00895 2A0115 benzoate transport.
Probab=99.14 E-value=9.6e-10 Score=114.01 Aligned_cols=158 Identities=16% Similarity=0.063 Sum_probs=98.8
Q ss_pred HHHHhccchhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009862 291 WAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKL 370 (523)
Q Consensus 291 ~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~L 370 (523)
++.+++++..+..+..++..++. ..+++.+..|.|.+..+.|. +. ........+..++.+++.++.+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~---------~~-~~~~~~~~~~~~~~~~~~~~~~~l 308 (398)
T TIGR00895 240 FKALFQGKTARITVLLWLLYFML-LVGVYFLTNWLPKLMVELGF---------SL-SLAATGGALFNFGGVIGSIIFGWL 308 (398)
T ss_pred HHHHhcchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444344444444333333 33466777888877766443 33 455566677888999999999999
Q ss_pred HHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHH
Q 009862 371 MDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAI 450 (523)
Q Consensus 371 sDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi 450 (523)
+||+|||++++... +.+++.+++..... ..+...+.. ++.+++.....+..+.+++|.+|++.|++++|+
T Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 378 (398)
T TIGR00895 309 ADRLGPRVTALLLL-LGAVFAVLVGSTLF--------SPTLLLLLG-AIAGFFVNGGQSGLYALMALFYPTAIRATGVGW 378 (398)
T ss_pred HhhcchHHHHHHHH-HHHHHHHHHHHHhh--------CHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Confidence 99999995544333 33333332222110 011122222 223333333445556778999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 009862 451 CAMAYWICDIIVTYTLPVM 469 (523)
Q Consensus 451 ~~~~~~lG~iig~~l~~~l 469 (523)
.+.+..+|.+++|.+.+++
T Consensus 379 ~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 379 AIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHhHHhc
Confidence 9999999999999998865
No 117
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.13 E-value=3.4e-09 Score=115.58 Aligned_cols=156 Identities=17% Similarity=0.147 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhcccc
Q 009862 350 FLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGP 429 (523)
Q Consensus 350 ~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 429 (523)
++...+......++....+.+.|++|||..+..+.++..++++++++..... .. ++..++..+..++...++..
T Consensus 353 ~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~ 426 (521)
T KOG0255|consen 353 YLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDL-GG-----WLHWILPLLGKFFIGSAFNL 426 (521)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccc-hh-----HHHHHHHHHHHHHHHHHHHH
Confidence 3444455557888888889999999999999999999988888887655433 10 12233333333444444444
Q ss_pred ccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCCCCCHHHHH
Q 009862 430 IPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVIT 509 (523)
Q Consensus 430 i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~le~i~ 509 (523)
+ +.+.+|++|+.+|.++.+.+++..+++++++|.+...... ......+.+++.++.+.++++.+++|||+++.+.+..
T Consensus 427 ~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~ 504 (521)
T KOG0255|consen 427 I-FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTL 504 (521)
T ss_pred H-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhH
Confidence 4 6788999999999999999999999999999988655444 3222333335667777777777889999999876544
Q ss_pred HHHh
Q 009862 510 EFFA 513 (523)
Q Consensus 510 ~~~~ 513 (523)
+..+
T Consensus 505 ~~~~ 508 (521)
T KOG0255|consen 505 LDAE 508 (521)
T ss_pred HHHH
Confidence 4433
No 118
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.13 E-value=2.2e-09 Score=112.76 Aligned_cols=165 Identities=13% Similarity=0.041 Sum_probs=103.6
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhCChHHHH-HHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLIS-AFTTFLMLPCIGVAMKLMDVAGRRKLLL-TTIPVLIVSLIILV 395 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~-~i~~l~~lig~~l~g~LsDr~GRR~lll-~~~~l~~i~~l~l~ 395 (523)
...+..++|.++.+ ++|++.. ...+.. ....+..+++.+++++ +||+|||+.++ .+.++.++..+++.
T Consensus 31 ~~~~~p~~~~~l~~--------~~~~s~~-~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~ 100 (393)
T PRK15011 31 GALQTPTLSIFLTD--------EVHARPA-MVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFA 100 (393)
T ss_pred HHHHHHHHHHHHHh--------hcCCCHH-HHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHH
Confidence 44566777777654 4566564 444443 3444456666666666 99999988654 44444444444443
Q ss_pred HHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhh--HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 396 ISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRG--ICIAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg--~a~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
+...+. .+++...+.........+....+..+..+.+.|. ...++.++...+|.+++|.+.+.+.+.+
T Consensus 101 ~~~~~~----------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~ 170 (393)
T PRK15011 101 WNRNYF----------VLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF 170 (393)
T ss_pred HhhHHH----------HHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc
Confidence 333222 2222222222333344555555556666655443 3447778888999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHhheeccCCCC
Q 009862 474 GLAGAFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 474 G~~~~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
||+..|++.++.+++.++++++++||.+.
T Consensus 171 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 199 (393)
T PRK15011 171 SFTVMYLSAAVAFIVCGVMVWLFLPSMRK 199 (393)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhcCccCC
Confidence 99999988888887777777777787643
No 119
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.12 E-value=1.6e-09 Score=111.54 Aligned_cols=146 Identities=18% Similarity=0.209 Sum_probs=90.9
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGR-RKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GR-R~lll~~~~l~~i~~l~l~~ 396 (523)
.+.+..|.|.++.+ .+|++. ........+..++.+++.++.++++||+.+ |+..+. ....+.+.+.+..
T Consensus 232 ~~~~~~~~~~~~~~--------~~g~~~-~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~-~~~~~~~~~~~~~ 301 (379)
T TIGR00881 232 RTGILDWSPLYLTQ--------EKGFSK-EKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLA-VFFMALIIVSLLV 301 (379)
T ss_pred HHHHHHHHHHHHHH--------HhCCCH-HHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHH-HHHHHHHHHHHHH
Confidence 45677788888865 244444 455566667888899999999999998643 332222 1111111111111
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
.. .......+ ..+...+..+.+..+..+..+.+..|.+|++.|+++.|+.+....+|..+++.+.+.+.+..||+
T Consensus 302 ~~----~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 376 (379)
T TIGR00881 302 YW----LNPAANPL-MDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWA 376 (379)
T ss_pred Hh----cCcchhHH-HHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccc
Confidence 11 00001111 11222222222333333444456789999999999999999999999999999999999999987
Q ss_pred hH
Q 009862 477 GA 478 (523)
Q Consensus 477 ~~ 478 (523)
..
T Consensus 377 ~~ 378 (379)
T TIGR00881 377 GA 378 (379)
T ss_pred cc
Confidence 54
No 120
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.12 E-value=5e-09 Score=109.45 Aligned_cols=154 Identities=14% Similarity=0.096 Sum_probs=105.9
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 398 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~ 398 (523)
.....|+|.++++.|. +. ........+..++.+++.++.++++||+|||+++..+..+.+++.+.+. .
T Consensus 217 ~~~~~~lp~~~~~~g~---------s~-~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~ 284 (381)
T PRK03633 217 GSLYGLMPLYLNHQGM---------SD-ASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S 284 (381)
T ss_pred HHHHHHHHHHHHHcCC---------CH-HHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h
Confidence 3445678888877444 33 3444556677788899999999999999999988877766665544332 1
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhH
Q 009862 399 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGA 478 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~ 478 (523)
... ......++ ++......|....++.|..|++.++...+..+..+.+|.+++|.+.+.+.+..++.+.
T Consensus 285 ~~~----------~~~~~~l~-g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~ 353 (381)
T PRK03633 285 QAA----------MAPALFIL-GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLL 353 (381)
T ss_pred hHH----------HHHHHHHH-HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHH
Confidence 100 11111112 2222233455556667888888888888888888999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHhhe
Q 009862 479 FGVYAVVCFISWVFVFL 495 (523)
Q Consensus 479 f~i~~i~~~i~~v~~~~ 495 (523)
|.+.+.+.++..+..+.
T Consensus 354 f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 354 FIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88877777655544443
No 121
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.11 E-value=1.9e-09 Score=128.25 Aligned_cols=146 Identities=12% Similarity=0.066 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccc
Q 009862 349 SFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYG 428 (523)
Q Consensus 349 ~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 428 (523)
..++.+++.++.+++.+++|+++||+|||++++++.++.+++.++..+..... ....+++..++.++......
T Consensus 49 ~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~ 121 (1146)
T PRK08633 49 TAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLG-------WFWLAFAVTFLLGAQSAIYS 121 (1146)
T ss_pred HHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHc-------cHHHHHHHHHHHHHHHHhhc
Confidence 45666778888899999999999999999999988766555554443322111 11234444445555556666
Q ss_pred cccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--------hC-chhHHHHHHHHHHHHHHHhheeccC
Q 009862 429 PIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS--------IG-LAGAFGVYAVVCFISWVFVFLRVPE 499 (523)
Q Consensus 429 ~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~--------~G-~~~~f~i~~i~~~i~~v~~~~~lpE 499 (523)
+...++++|++|.+.|++++++..++..+|.++++.+++++... ++ +.+.+.+..++.++++++..+++|+
T Consensus 122 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (1146)
T PRK08633 122 PAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPK 201 (1146)
T ss_pred hHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcC
Confidence 77778889999999999999999999999999999999998876 32 3334434444444444444555676
Q ss_pred CC
Q 009862 500 TK 501 (523)
Q Consensus 500 tk 501 (523)
+.
T Consensus 202 ~~ 203 (1146)
T PRK08633 202 VP 203 (1146)
T ss_pred CC
Confidence 53
No 122
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.11 E-value=6.3e-09 Score=107.70 Aligned_cols=160 Identities=17% Similarity=0.167 Sum_probs=110.8
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
+.+....|.-.++++ ..|++. +...+....+.++.+++..+.|+++|| +.|+.+.....+.++.++.+.+
T Consensus 226 g~F~~ftYi~P~L~~--------v~g~s~-~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~ 295 (394)
T COG2814 226 GHFALYTYIRPFLES--------VAGFSV-SAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTF 295 (394)
T ss_pred chhhhHHhHHHHHHH--------ccCCCH-hHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHH
Confidence 455666666666655 244444 566777789999999999999999999 8888888777777777666554
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccc-cceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPI-PNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGL 475 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i-~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~ 475 (523)
..... +..++.+.+ ..+.....+. .....++ .-++.+..+.++....+++|..+|..+++.+.+.+|+
T Consensus 296 ~~~~~--------~~~~~~~~~--wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~ 364 (394)
T COG2814 296 TGASP--------ALALALLFL--WGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGY 364 (394)
T ss_pred hcchH--------HHHHHHHHH--HHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Confidence 33322 122222222 2222222222 1222344 3457899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhheec
Q 009862 476 AGAFGVYAVVCFISWVFVFLRV 497 (523)
Q Consensus 476 ~~~f~i~~i~~~i~~v~~~~~l 497 (523)
....++-+++.+++.++..+..
T Consensus 365 ~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 365 AATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888877777766665533
No 123
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.10 E-value=2.4e-09 Score=110.03 Aligned_cols=150 Identities=17% Similarity=0.204 Sum_probs=116.5
Q ss_pred ccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHH
Q 009862 340 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIY 419 (523)
Q Consensus 340 ~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~ 419 (523)
++++|. .+..++..+..+...+..++.|++.||+|-|+..+++.+++.+-++.+.+..... ..+ .++++.++
T Consensus 43 ~~~LS~-~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~------~~~-~ll~~gll 114 (417)
T COG2223 43 DFGLSE-GQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYP------STW-QLLVIGLL 114 (417)
T ss_pred ccCCCH-HHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCC------chH-HHHHHHHH
Confidence 466666 5667777788899999999999999999999999999888887777776654433 011 22222223
Q ss_pred HHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---chhHHHHHHHHHHHHHHHhhee
Q 009862 420 FCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG---LAGAFGVYAVVCFISWVFVFLR 496 (523)
Q Consensus 420 ~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G---~~~~f~i~~i~~~i~~v~~~~~ 496 (523)
+....+...+...+++..||++.+|+++|+.. .+|+|..+...+.|.++...| |+.+..++.+..++.++..++.
T Consensus 115 -~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~ 192 (417)
T COG2223 115 -LGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLG 192 (417)
T ss_pred -HhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444455567799999999999999988 999999999999999999999 8999999998888888877776
Q ss_pred ccC
Q 009862 497 VPE 499 (523)
Q Consensus 497 lpE 499 (523)
..+
T Consensus 193 ~~d 195 (417)
T COG2223 193 MND 195 (417)
T ss_pred hCC
Confidence 543
No 124
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.10 E-value=3.3e-09 Score=108.67 Aligned_cols=134 Identities=11% Similarity=-0.025 Sum_probs=95.6
Q ss_pred hchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009862 323 YYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQL 402 (523)
Q Consensus 323 ~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~ 402 (523)
.+.|.++++ .++.+. ........+..++.+++.++.+++.||++||+++..+..+.+++++.+.+...
T Consensus 232 ~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 299 (365)
T TIGR00900 232 ALFPYVQSK--------YLGRGS-THYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPP--- 299 (365)
T ss_pred HHhHHHHHH--------HhCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhch---
Confidence 677888775 134444 45556666778889999999999999999999888776666665555443221
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009862 403 ISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG 474 (523)
Q Consensus 403 ~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G 474 (523)
+.+...+. .++.++......+....++.|.+|++.|+++.|+.+...+++..+++.+.+.+.+.+|
T Consensus 300 -----~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 300 -----NFPLFLVL-WFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred -----hHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 01122222 2333333334455556777899999999999999999999999999999999988654
No 125
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.09 E-value=2.5e-09 Score=109.92 Aligned_cols=190 Identities=17% Similarity=0.182 Sum_probs=134.6
Q ss_pred cHHHHhccchhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 009862 290 SWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMK 369 (523)
Q Consensus 290 ~~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~ 369 (523)
..+.++++ +.+++.+++++ ..|.++-++..|+|.|+++ +++++. ..+........+...+..+++|+
T Consensus 210 ~~~~v~~~---~~~W~lsllY~-~tFG~Fvgfs~~l~~~~~~--------~fg~~~-~~Ag~~a~~f~~~g~l~Rp~GG~ 276 (417)
T COG2223 210 QLKAVFSN---KDTWLLSLLYF-ATFGGFVGFSAYLPMYLVT--------QFGLSP-VTAGLIAFLFPLIGALARPLGGW 276 (417)
T ss_pred HHHHHhcC---cchHHHHHHHH-HHHHHHHHHHHHHHHHHHH--------hcCCCh-hhHHHHHHHHHHHHHHHHhccch
Confidence 35555543 34444444443 3455677889999999987 677777 45556667788888899999999
Q ss_pred HHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHH
Q 009862 370 LMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIA 449 (523)
Q Consensus 370 LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~g 449 (523)
|+||+|.++++.+...+++++..++.+..... . .....+..+..++.+..+.+.+.+.+. .+++.+||. .-|...|
T Consensus 277 LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~-~-~~~~~~~~~~~~l~l~~~~G~GnGsvf-k~Ip~if~~-~~G~v~G 352 (417)
T COG2223 277 LSDRIGGRRVTLAVFVGMALAAALLSLFLTGF-G-HGGSFVVFVAVFLALFVFAGLGNGSVF-KMIPVIFPK-ETGAVTG 352 (417)
T ss_pred hhhhccchhHHHHHHHHHHHHHHHHHcccccc-c-cCcchHHHHHHHHHHHHHhccCcchhe-eechHHHHh-hhhHHHH
Confidence 99999999999988888888887776543221 1 112222333334444455555555554 667888876 5688899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhC-chhHHHHHHHHHHHHHHHhhee
Q 009862 450 ICAMAYWICDIIVTYTLPVMLSSIG-LAGAFGVYAVVCFISWVFVFLR 496 (523)
Q Consensus 450 i~~~~~~lG~iig~~l~~~l~~~~G-~~~~f~i~~i~~~i~~v~~~~~ 496 (523)
+..+++.+|+++-|...+...+..| +...|+++..+.+++.++.+..
T Consensus 353 ~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 353 IVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988 6667778777777777665543
No 126
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.08 E-value=6e-09 Score=111.83 Aligned_cols=187 Identities=15% Similarity=0.053 Sum_probs=106.1
Q ss_pred cHHHHhccchhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 009862 290 SWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMK 369 (523)
Q Consensus 290 ~~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~ 369 (523)
.++.+++. +.++..++.. +....+++.+..|+|.|+++ .+|++. ....+...+..++.+++.+++|+
T Consensus 253 ~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~lp~~l~~--------~~g~s~-~~~g~~~~~~~~~~~i~~~~~g~ 319 (465)
T TIGR00894 253 PIKAIPKS---LPVWAIWFAI-FGHFWLYTILPTYLPTFISW--------VLRVSG-KENGLLSSLPYLFAWLCSIFAGY 319 (465)
T ss_pred CHHHHhcC---HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH--------HhCcCh-HHhHHHHHHHHHHHHHHHHHHHH
Confidence 35555553 3333333333 33444577888899999876 355555 45556666778889999999999
Q ss_pred HHHhhCChHHHH---HHHHHHHHHH---HHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcch
Q 009862 370 LMDVAGRRKLLL---TTIPVLIVSL---IILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKV 443 (523)
Q Consensus 370 LsDr~GRR~lll---~~~~l~~i~~---l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~ 443 (523)
++||+++|+... ...+...++. .+..+..... . ...+..+++ .++.+++..+..+..+....|..|. .
T Consensus 320 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~-~ 393 (465)
T TIGR00894 320 LADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYL--S--AAFYLTIII-LTLANAVSSGPLAGVLINSLDLAPR-F 393 (465)
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHc--C--CchHHHHHH-HHHHHHHhhhhhhhhhhchhhcChh-H
Confidence 999987542211 0001111111 1111111100 0 011112222 2222222222233333444566665 8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CchhHHHHHHHHHHHHHHHhhe
Q 009862 444 RGICIAICAMAYWICDIIVTYTLPVMLSSI---GLAGAFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 444 Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~---G~~~~f~i~~i~~~i~~v~~~~ 495 (523)
+|++.++.++.+.++++++|.+.+.+.+.. +|...|.+.++++++..++..+
T Consensus 394 ~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 394 LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 999999999999999999999999887643 3666777777666666555444
No 127
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.07 E-value=3.2e-09 Score=126.33 Aligned_cols=162 Identities=16% Similarity=0.085 Sum_probs=102.5
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 398 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~ 398 (523)
+.+..++|.++.+ .+|++......++.++..++.+++.+++++++||+++|+++.++.++++++++++.+..
T Consensus 249 ~~~~~~~~~~~~~--------~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1146)
T PRK08633 249 QLAQANFPAYAKE--------VLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP 320 (1146)
T ss_pred HHHHHhhHHHHHH--------HhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh
Confidence 4456677777765 34555531556666777888999999999999999999888877777666665554332
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCchh
Q 009862 399 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS-IGLAG 477 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~-~G~~~ 477 (523)
+.. ..+++.+++ +++.....+...+++.+.+|++.|++++|+.+++..+|.++++.+.+.+... +++..
T Consensus 321 ~~~---------~~~~~~~~~-g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~ 390 (1146)
T PRK08633 321 SLA---------SVLVLFFLF-GFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAG 390 (1146)
T ss_pred hHH---------HHHHHHHHH-HHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHH
Confidence 211 222222223 2333333344456778999999999999999999999998887776655441 23333
Q ss_pred HHHHHHHHHHHHHHHhheecc
Q 009862 478 AFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lp 498 (523)
.+++.++++++..++.++.+|
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~ 411 (1146)
T PRK08633 391 LFYLIALVTLIGTLYTLLLLP 411 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhH
Confidence 444444444443333333333
No 128
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.07 E-value=4.7e-09 Score=110.19 Aligned_cols=162 Identities=12% Similarity=0.031 Sum_probs=104.3
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
+.....+.|.++++... ..+.+. ........+..+..+++.+..+++.||+|||+.++++.++.++..++....
T Consensus 231 ~~~~~~~~~~y~~~~~~-----~~~~~~-~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~ 304 (396)
T TIGR00882 231 YDVFDQQFANFFTSFFA-----TPQQGT-RVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA 304 (396)
T ss_pred HHHHHHHHHHHHHHhcc-----ccccch-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc
Confidence 33444566777665321 112222 233445556677788888999999999999999888777666655543322
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCch
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAI-CAMAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi-~~~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
.+.. ...+..++...+. .........++.+.+|++.++++.++ .+....+|.++++.+.+++.+..|+.
T Consensus 305 ~~~~---------~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~ 374 (396)
T TIGR00882 305 TTAL---------EVVILKMLHAFEV-PFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQ 374 (396)
T ss_pred CChH---------HHHHHHHHHHHHH-HHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccH
Confidence 2111 1222222222111 11112223455677888888887776 57789999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhe
Q 009862 477 GAFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 477 ~~f~i~~i~~~i~~v~~~~ 495 (523)
.+|.+.+++.++..++..+
T Consensus 375 ~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 375 GAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9998888887777666544
No 129
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.06 E-value=2.5e-09 Score=110.41 Aligned_cols=149 Identities=15% Similarity=0.131 Sum_probs=102.8
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
+..+...+|.+.+++|. +. ....+..++..++..++.++.|+++||+|||++++++.++.+++.+.. ..
T Consensus 16 ~~~~~~~lp~l~~~~~~---------s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~ 84 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGM---------SF-SVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA 84 (355)
T ss_pred cccCcccHHHHHHHhCC---------CH-HHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh
Confidence 44566778888887554 34 667778889999999999999999999999999988877666554433 22
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--c
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG--L 475 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G--~ 475 (523)
.+.. .+++..++.++......+....++.+.+| +.|++++++.+....+|..+++.+.+.+.+..+ |
T Consensus 85 ~~~~----------~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w 153 (355)
T TIGR00896 85 PGTA----------LLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHW 153 (355)
T ss_pred ccHH----------HHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Confidence 1111 22222323222222223333345678886 579999999999999999999999988877653 7
Q ss_pred hhHHHHHHHHHHH
Q 009862 476 AGAFGVYAVVCFI 488 (523)
Q Consensus 476 ~~~f~i~~i~~~i 488 (523)
+..|.+.++++++
T Consensus 154 ~~~f~~~~~~~~~ 166 (355)
T TIGR00896 154 QQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHHHHH
Confidence 7777665554433
No 130
>PRK10133 L-fucose transporter; Provisional
Probab=99.06 E-value=7.5e-09 Score=110.56 Aligned_cols=149 Identities=10% Similarity=-0.015 Sum_probs=101.2
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHH
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLL 380 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ll 380 (523)
..+++.+.+.+...+ .......+.|.+.++ ++++. ....+....+.++..++.++.|+++||+|||+++
T Consensus 26 ~~~~~~~~~~~~~~~-~~~~~~~~~p~i~~~---------~~~s~-~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l 94 (438)
T PRK10133 26 IPFALLCSLFFLWAV-ANNLNDILLPQFQQA---------FTLTN-FQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI 94 (438)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH---------hCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 333333333333333 345667778888655 44544 6677777889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH---HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHH
Q 009862 381 LTTIPVLIVSLIILVI---SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWI 457 (523)
Q Consensus 381 l~~~~l~~i~~l~l~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~l 457 (523)
+++.++.+++.+++.. .+++. .+++..++.++......+..+.++.++.|.+.|...+++.+.+..+
T Consensus 95 ~~g~~~~~~~~~l~~~~~~a~~~~----------~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~ 164 (438)
T PRK10133 95 ITGLFLYALGAALFWPAAEIMNYT----------LFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSF 164 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHH----------HHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHH
Confidence 9999888887765431 11221 3333333333333334444445667877777777789999999999
Q ss_pred HHHHHHHHHHHHH
Q 009862 458 CDIIVTYTLPVML 470 (523)
Q Consensus 458 G~iig~~l~~~l~ 470 (523)
|..+++.+.+.+.
T Consensus 165 G~~~g~~~g~~l~ 177 (438)
T PRK10133 165 GAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHH
Confidence 9999998877654
No 131
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.05 E-value=7.8e-10 Score=118.65 Aligned_cols=155 Identities=6% Similarity=0.041 Sum_probs=100.0
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh--CChHHHHHH--HHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA--GRRKLLLTT--IPVLIVSLI 392 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~--GRR~lll~~--~~l~~i~~l 392 (523)
+++....|+|.++++.|. +. ....++.++..++.+++.++.++++||. ++|+..++. .++.+++.+
T Consensus 256 ~~~~~~~~l~~~~~~~g~---------s~-~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~l 325 (455)
T TIGR00892 256 GFFAPIIFLVPYAKDKGV---------DE-YEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHL 325 (455)
T ss_pred HccchHHHHHHHHHHcCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHH
Confidence 355667788888876444 34 4555666678888899999999999973 334333322 222222222
Q ss_pred HHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009862 393 ILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS 472 (523)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~ 472 (523)
++....+ .+ .+++..++.++......+....++.|.+|.+.+++++|+++.+..+|.+++|.+.+.+.+.
T Consensus 326 l~~~~~~---------~~-~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~ 395 (455)
T TIGR00892 326 LCALAGD---------YT-GLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA 395 (455)
T ss_pred HHHHhch---------HH-HHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehh
Confidence 2221111 11 2222222223333333445556678999999999999999999999999999999999988
Q ss_pred hC-chhHHHHHHHHHHHHHH
Q 009862 473 IG-LAGAFGVYAVVCFISWV 491 (523)
Q Consensus 473 ~G-~~~~f~i~~i~~~i~~v 491 (523)
.+ |...|.+.+++++++++
T Consensus 396 ~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 396 TKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred cCCcchHHHHhhHHHHHHHH
Confidence 74 77777777666655544
No 132
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.05 E-value=5.5e-09 Score=113.23 Aligned_cols=180 Identities=15% Similarity=0.127 Sum_probs=117.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh-----C
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA-----G 375 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~-----G 375 (523)
|+.+..+++.+.+.. ........+|.++++.|. +. ......+ ...... ++.++++.++||+ |
T Consensus 12 ~~~~~~~~l~~~~gl-~~~~~~~~l~~~l~~~g~---------~~-~~ig~~~-~~~~~~-~~~~l~gpl~Dr~~~~~~G 78 (491)
T PRK11010 12 PNSAILLILGFASGL-PLALTSGTLQAWMTVENI---------DL-KTIGFFS-LVGQAY-VFKFLWSPLMDRYTPPFLG 78 (491)
T ss_pred cHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCC---------CH-HHHHHHH-HHHHHH-HHHHHHHHHHHcccccCCC
Confidence 445555555444433 355666678888887554 22 2333322 222222 6789999999999 9
Q ss_pred ChHH-HHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHH
Q 009862 376 RRKL-LLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMA 454 (523)
Q Consensus 376 RR~l-ll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~ 454 (523)
||+. ++++.+..+++.+.+.+.... .+. ..+....++.+++.....+...++..|++|.+.|+++.++..+.
T Consensus 79 rrr~~ll~~~i~~~~~~~~~a~~~~~------~~l-~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g 151 (491)
T PRK11010 79 RRRGWLLATQLLLLVAIAAMGFLEPG------TQL-RWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLG 151 (491)
T ss_pred CchHHHHHHHHHHHHHHHHHHHcCCc------chH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHH
Confidence 9885 556666665665555442211 111 12232333334444455555667889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH-hhCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 455 YWICDIIVTYTLPVMLS-SIGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 455 ~~lG~iig~~l~~~l~~-~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
+++|.++++.+...+.+ ..||+..|++.+++.++..+..++ +||+.
T Consensus 152 ~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~ 198 (491)
T PRK11010 152 YRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPT 198 (491)
T ss_pred HHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCc
Confidence 99999999999999988 579999999888777666554443 67763
No 133
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.05 E-value=1.2e-08 Score=108.78 Aligned_cols=179 Identities=13% Similarity=0.107 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHH
Q 009862 303 LLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLT 382 (523)
Q Consensus 303 ~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~ 382 (523)
+++.+++. ++.+.++.++.+|+|+++++. + +. ........+..+...+..+++|+++||+|+|+++++
T Consensus 254 ~Wllslly-~~tFG~fvg~s~~lp~~~~~~--------~--~~-~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~ 321 (462)
T PRK15034 254 LWLLSLLY-LATFGSFIGFSAGFAMLAKTQ--------F--PD-VNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLI 321 (462)
T ss_pred hhHHHHHH-HHHHHHHHHHHHHHHHHHHHH--------c--Ch-HHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHH
Confidence 34444443 334545667888999998762 1 11 222333445567788899999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCc---------------------
Q 009862 383 TIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPT--------------------- 441 (523)
Q Consensus 383 ~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~--------------------- 441 (523)
++++++++.+++..... .......+..++.++.+..+.+.+.+++. -+++.+||.
T Consensus 322 ~~i~~~i~~~~~~l~lp---~~~~~~~~~~~~~~~~l~~~~G~gngsvf-k~ip~~f~~~~~~~~~~~~~~~~~~~~~~~ 397 (462)
T PRK15034 322 NFIFMAIFSALLFLTLP---GTGSGNFIAFYAVFMGLFLTAGLGSGSTF-QMIAVIFRQITIYRVKMKGGSDEQAQREAV 397 (462)
T ss_pred HHHHHHHHHHHHHHHhc---cccccHHHHHHHHHHHHHHHhcccchHHH-HhhHHHHhhhhhhcccccccchhHHhhHHH
Confidence 88877766644332221 11111222333333333344444444443 456788874
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-chhHHHHHHHHHHHHHHHhheec
Q 009862 442 KVRGICIAICAMAYWICDIIVTYTLPVMLSSIG-LAGAFGVYAVVCFISWVFVFLRV 497 (523)
Q Consensus 442 ~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G-~~~~f~i~~i~~~i~~v~~~~~l 497 (523)
+.-|.+.|+..+.+.+|+++.|.+++...+..| +...|+++.+..++|.++.+++.
T Consensus 398 ~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 398 TETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred HHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 156788999999999999999999999988876 44567777777777777666543
No 134
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.05 E-value=3e-09 Score=109.76 Aligned_cols=163 Identities=18% Similarity=0.084 Sum_probs=107.8
Q ss_pred hhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh-----CChHHH-HHHHHHHHHHHHH
Q 009862 320 GVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA-----GRRKLL-LTTIPVLIVSLII 393 (523)
Q Consensus 320 ~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~-----GRR~ll-l~~~~l~~i~~l~ 393 (523)
.+..-.|.++++.|+ +. ....+...+ .+...+ .+++|+++||+ |||+.+ +.+.++.++++++
T Consensus 6 ~~~~~~~~~~~~~g~---------s~-~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~ 73 (356)
T TIGR00901 6 LVGNTLPYWLRSKNV---------SL-KTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLI 73 (356)
T ss_pred hHHhHHHHHHHHcCC---------CH-HHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHH
Confidence 445567788887554 44 344444433 333333 88999999998 898874 5555555555544
Q ss_pred HHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 394 LVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
+.+... ....+. +..+.+....+.....+...++++|++|++.|+.+.++......+|.++++.+.+.+....
T Consensus 74 l~~~~~------~~~l~~-l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 146 (356)
T TIGR00901 74 LSFLVP------STDLPL-LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPE 146 (356)
T ss_pred HHcCCc------chhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 443211 111112 2222222233334445555677899999999999999999999999999999999998888
Q ss_pred C--------chhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 474 G--------LAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 474 G--------~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
+ |+..|++.+++.++..++.++..||.+
T Consensus 147 g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 147 FANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 8 999998888877766655555567753
No 135
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.04 E-value=2e-08 Score=105.11 Aligned_cols=159 Identities=11% Similarity=0.037 Sum_probs=94.8
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHH-HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFT-TFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~-~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
.....+.+.++++.|+ +. +...+...+. .+..+++.++.|++.||+|+|+.+.++.++.++..+.....
T Consensus 225 ~~~~~~~~~~l~~~G~---------s~-~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~ 294 (390)
T TIGR02718 225 VSGFGLSKLYLVDAGW---------PL-EWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQ 294 (390)
T ss_pred HHHHHHhhHHHHhcCC---------CH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444566777776544 44 3444444444 34667788899999999999998887766553332222211
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPT-KVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~-~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
.... ... ..........+...+.+... +....+..+..++ +.+++.+++.+....+|.+++|.+.+.+.+..|+.
T Consensus 295 ~~~~-~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~ 370 (390)
T TIGR02718 295 AAFW-LAP--GIAVAWSCSAFGSLITGITS-VAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYA 370 (390)
T ss_pred HHcc-cCC--cHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccH
Confidence 1111 000 11111111111111222222 2222333455554 88999999999999999999999999999999988
Q ss_pred hHHHHHHHHHHHHHH
Q 009862 477 GAFGVYAVVCFISWV 491 (523)
Q Consensus 477 ~~f~i~~i~~~i~~v 491 (523)
..|.+.+++.++..+
T Consensus 371 ~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 371 GGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777766665555433
No 136
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.03 E-value=6.7e-09 Score=109.32 Aligned_cols=167 Identities=14% Similarity=0.088 Sum_probs=115.5
Q ss_pred hhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh-----CChH-HHHHHHHHHH
Q 009862 315 FSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA-----GRRK-LLLTTIPVLI 388 (523)
Q Consensus 315 ~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~-----GRR~-lll~~~~l~~ 388 (523)
...+.....-+|.++++.|+ +. ++..++..+... .+..+++|+++||+ |||+ .++++.++++
T Consensus 12 ~~~~~~~~~~~~~~l~~~g~---------~~-~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~ 79 (402)
T PRK11902 12 GLPLALTSGTLQAWMTVEGL---------DI-QTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLA 79 (402)
T ss_pred hhhHHHHHHHHHHHHHHcCC---------CH-HHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHH
Confidence 33456667788999998665 33 455444444333 58889999999999 8775 6777777777
Q ss_pred HHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 389 VSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPV 468 (523)
Q Consensus 389 i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~ 468 (523)
++++.+.+... ..+.+. ++.+.++..++.....+...+++.|++|++.|+++.++..+.+.+|.++++.+...
T Consensus 80 l~~~~l~~~~~------~~~~~~-l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~ 152 (402)
T PRK11902 80 ASIAAMAFCPP------HAALWP-LAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALW 152 (402)
T ss_pred HHHHHHHhcCc------cchHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHH
Confidence 66666554321 111122 22222223345555566666788999999999999999999999999999999998
Q ss_pred HHHh-hCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 469 MLSS-IGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 469 l~~~-~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
+.+. .||+..|++.+++.++..+. .+++||++
T Consensus 153 l~~~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~ 185 (402)
T PRK11902 153 LADRVLGWGNTYLLMAGLMLAGALT-TLWAPEPE 185 (402)
T ss_pred HHhcccCHHHHHHHHHHHHHHHHHH-HHhcCCCc
Confidence 8885 59999998888777655443 34566653
No 137
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.03 E-value=9e-09 Score=110.32 Aligned_cols=190 Identities=15% Similarity=0.100 Sum_probs=124.3
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH----hhCC
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMD----VAGR 376 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsD----r~GR 376 (523)
++++....+.+..|++ +.....+++.|++.+|. +. ....++..+..+..++..++.|+++| |+||
T Consensus 4 ~~li~~~~~~~Giq~~-~~l~~~~l~~yl~~lg~---------~~-~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GR 72 (477)
T TIGR01301 4 RKLLRVASVAAGVQFG-WALQLSLLTPYVQELGI---------PH-AWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGR 72 (477)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCC---------CH-HHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCC
Confidence 4455555555666664 66677788888877554 33 66677777888999999999999999 5999
Q ss_pred hHHHHHH-HHHHHHHHHHHHHHHhhhcc-c----hhhhH---HHHHHHHHHHHHHHhhccccccceeeecccCcchh--h
Q 009862 377 RKLLLTT-IPVLIVSLIILVISETLQLI-S----PVLKA---GISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVR--G 445 (523)
Q Consensus 377 R~lll~~-~~l~~i~~l~l~~~~~~~~~-~----~~~~~---~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~R--g 445 (523)
|+.++.+ .+..+++++++.+....... . ..... +..++.+.++..+......|. .++++|++|++.| +
T Consensus 73 Rrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~-rALiaDl~p~~~~~~~ 151 (477)
T TIGR01301 73 RRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPC-RAFLADLTGGDARRTR 151 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccccCchhHHHH
Confidence 9988765 44445554554443322100 0 00011 112222222223333333344 4778999998866 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHhh-------------CchhHHHHHHHHHHHHHHHhheeccCCCC
Q 009862 446 ICIAICAMAYWICDIIVTYTLPVM--LSSI-------------GLAGAFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 446 ~a~gi~~~~~~lG~iig~~l~~~l--~~~~-------------G~~~~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
.+.++.+.+..+|+++++.+.++. ...+ +.+..|.+-+++.+++.++..+.+||...
T Consensus 152 ~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 152 IANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 789999999999999999988765 2222 44567888788888888888888998653
No 138
>PTZ00207 hypothetical protein; Provisional
Probab=99.03 E-value=8.8e-09 Score=112.76 Aligned_cols=164 Identities=9% Similarity=0.058 Sum_probs=102.1
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
.|.+..+.|.+.+++|+ +.. ...++..+... ...+.+++|++.||+|||++++++.++.+++.+++.+.
T Consensus 43 ~y~fsv~s~~L~~~lgl---------s~~-~l~~i~svg~~-~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala 111 (591)
T PTZ00207 43 MYAFNLISGAMQARYNL---------TQR-DLSTITTVGIA-VGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALT 111 (591)
T ss_pred HHHHHHHHHHHHHHhCc---------CHH-HHHHHHHHHHH-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 45777888888776544 443 33333333322 23456678999999999999999999998888877664
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
.... . ..+. ..+.+..++.+.......+.....+.++|| +.||+++|+...+..+|+++.+.+...+.. .+|..
T Consensus 112 ~~~~-i--~~s~-~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~ 185 (591)
T PTZ00207 112 FQEV-I--EGSV-VRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSA 185 (591)
T ss_pred hccc-c--cCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHH
Confidence 2111 0 0111 122222333333333233333345678897 679999999999999999865555444443 35666
Q ss_pred HHHHHHHHHHHHHHHhheecc
Q 009862 478 AFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lp 498 (523)
.|++.+++.++..++.+++++
T Consensus 186 ~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 186 YFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHHHHHHHHHhhee
Confidence 777777777776666655554
No 139
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.03 E-value=1e-08 Score=108.50 Aligned_cols=168 Identities=15% Similarity=0.070 Sum_probs=101.2
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
++..+..++|.++++ ++|++. ....+..++..+...++.++.|+++||+|||++++++..+.+++...+..
T Consensus 25 ~~~~~~~~~~~~l~~--------~~g~s~-~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 95 (420)
T PRK09528 25 IWSSWFSFFPIWLHD--------INGLSG-TDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFI 95 (420)
T ss_pred HHHHHHHHHHHHHHH--------hcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 345667888888876 345555 56677788999999999999999999999999988765555443322211
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccC--cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFP--TKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG 474 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP--~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G 474 (523)
..... .... .......+.....+.+..... ..+..+.+ .+.++..++.......+|.++++.+.+.+.+ .+
T Consensus 96 ~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~ 168 (420)
T PRK09528 96 YVFAP----LLQY-NILLGAIVGGIYLGFGFLAGA-GAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN-IN 168 (420)
T ss_pred HHHHH----HHHH-HHHHHHHHHHHHhhhhhccch-hhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh-cC
Confidence 10000 0000 001111111111111111111 11122222 2346677888888899999999999998876 48
Q ss_pred chhHHHHHHHHHHHHHHHhheeccCC
Q 009862 475 LAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 475 ~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
|+..|++.+++++++.++.++..|+.
T Consensus 169 ~~~~f~~~~~~~~~~~~~~~~~~~~~ 194 (420)
T PRK09528 169 PQINFWLGSGSALILLVLLFFAKPDA 194 (420)
T ss_pred chHhHHHHHHHHHHHHHHHhcccccc
Confidence 88888887777766666655544443
No 140
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.03 E-value=1.8e-09 Score=120.41 Aligned_cols=190 Identities=13% Similarity=-0.039 Sum_probs=129.7
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHH
Q 009862 300 KRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKL 379 (523)
Q Consensus 300 ~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~l 379 (523)
++.+++.+.+..+.+......+..-+|++-++ +++++ ....++.+.+.++.+++.++.+++.||+|||+.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~---------F~lss-~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~ 100 (633)
T TIGR00805 31 IKVFSLLLTCAQLQGLLYNGLVNSSLTTIERR---------FKLST-SSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIV 100 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhh---------hCCCC-CcceeeeehhhHHHHHHHHHHHHhhcccCcceE
Confidence 34444444444444443223334444555544 55556 456667778899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc---cc-------------------h-----------------h--hhHHHHHHHHHH
Q 009862 380 LLTTIPVLIVSLIILVISETLQL---IS-------------------P-----------------V--LKAGISTACVII 418 (523)
Q Consensus 380 ll~~~~l~~i~~l~l~~~~~~~~---~~-------------------~-----------------~--~~~~~~~i~~~~ 418 (523)
+.+++++++++.+++++...... .. . . ...+..+++..+
T Consensus 101 i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 180 (633)
T TIGR00805 101 IGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQL 180 (633)
T ss_pred EEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHH
Confidence 99999999988888766531100 00 0 0 012334455566
Q ss_pred HHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---------------------C-ch
Q 009862 419 YFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI---------------------G-LA 476 (523)
Q Consensus 419 ~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~---------------------G-~~ 476 (523)
+.++......++...++.|.+|++.|+..+++.+....+|.++++.+++++.+.+ | |+
T Consensus 181 l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWw 260 (633)
T TIGR00805 181 LRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWW 260 (633)
T ss_pred HHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHH
Confidence 6666666777788889999999999999999999999999999999999887643 1 55
Q ss_pred hHHHHHHHHHHHHHHHhheeccCC
Q 009862 477 GAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 477 ~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
..|++.+++.++.++.. +++|++
T Consensus 261 l~Fli~g~l~~l~~v~l-~~~p~~ 283 (633)
T TIGR00805 261 IGFLICGGVALLTSIPF-FFFPKA 283 (633)
T ss_pred HHHHHHHHHHHHHHHHH-HhCccc
Confidence 55666666666655543 345554
No 141
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.03 E-value=2e-08 Score=106.68 Aligned_cols=166 Identities=14% Similarity=0.135 Sum_probs=111.5
Q ss_pred ccHHHHhccchhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 009862 289 PSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAM 368 (523)
Q Consensus 289 ~~~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g 368 (523)
..++.+++++..+.+++..++..+. ......+.+++.+.. ++.+ ........+..+..+++.++++
T Consensus 216 ~~~~~~~~nr~~~~l~~~~~~~~~~----~~~~~~~~~y~~~~v--------l~~~--~~~~~~~~~~~~~~~v~~~~~~ 281 (428)
T PF13347_consen 216 DSLRSLFRNRPFRILLLAFFLQWLA----FALMNTFLPYYFTYV--------LGNE--GLISIFMLIFFVASIVGSPLWG 281 (428)
T ss_pred cchhhhcccchHHHHHHHHHHHHhh----hhhhhhHHHHHHHHH--------hcCc--hhhHHHHHHHHHHHHHHHHHHH
Confidence 3466777764444444444333322 333444445555442 2222 2344555577888899999999
Q ss_pred HHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccC-------c
Q 009862 369 KLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFP-------T 441 (523)
Q Consensus 369 ~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP-------~ 441 (523)
+++||+|+|+++..+.++.+++.+++.+.... ....+++..++.+........+++++.+|+.+ .
T Consensus 282 ~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~ 353 (428)
T PF13347_consen 282 RLSKRFGKKKVYIIGLLLAALGFLLLFFLGPG--------SPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGR 353 (428)
T ss_pred HHHHHccceeehhhhHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCC
Confidence 99999999999999999888888776655411 11234444444455555566778888899876 3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 009862 442 KVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 442 ~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
+..|...|+.++...++..+++.+.+.+++..|+.
T Consensus 354 r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 354 RREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred CchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 44689999999999999999999999998876543
No 142
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.02 E-value=2e-08 Score=106.13 Aligned_cols=162 Identities=14% Similarity=0.133 Sum_probs=107.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
..+.+.......+.+++.++..++++|+|+|+++.++.++.+++.+.+.+..... ...+++..+........
T Consensus 272 l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~--------~~l~~~~~~i~~~g~~~ 343 (467)
T COG2211 272 LFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGS--------VVLIVVALIIAGVGTGI 343 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcc--------hHHHHHHHHHHHHHhhc
Confidence 4454555566677777799999999999999999999998888888777654111 12333333444555566
Q ss_pred cccccceeeecccC-----c--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch---------------hHHHHHHH
Q 009862 427 YGPIPNILCAEIFP-----T--KVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA---------------GAFGVYAV 484 (523)
Q Consensus 427 ~~~i~~~~~aElfP-----~--~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~---------------~~f~i~~i 484 (523)
..+++|++++|+.. + |.-|...++..++..+|..++..+.++++...|+. ..+.++.+
T Consensus 344 ~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv~~~~~Q~~~al~gI~~~~~~~Pa 423 (467)
T COG2211 344 ANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYVPNVSAQSASALFGIRFLFIILPA 423 (467)
T ss_pred cccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHHHHHH
Confidence 77889999888742 3 34477778889999999999999999999876532 23344444
Q ss_pred HHHHHHHHhheeccCCCCCCHHHHHHHHhcccc
Q 009862 485 VCFISWVFVFLRVPETKGMPLEVITEFFAVGAR 517 (523)
Q Consensus 485 ~~~i~~v~~~~~lpEtk~~~le~i~~~~~~~~~ 517 (523)
++.+.+.+...+.|-++. ..++|.+.++++++
T Consensus 424 ~l~l~~~i~~~~y~L~~~-~~~~I~~eL~~r~~ 455 (467)
T COG2211 424 LLLLLAAIIIFFYKLNEK-MHKEIIEELEQRKA 455 (467)
T ss_pred HHHHHHHHHHHhccCCHH-HHHHHHHHHHHHhc
Confidence 444444444445565543 34455555554443
No 143
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.01 E-value=1.9e-09 Score=117.43 Aligned_cols=137 Identities=19% Similarity=0.266 Sum_probs=97.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
....+++....+...++.++.|+++|.||||..++++.++..+..++.+.+.+.. ..+....+++.. .+
T Consensus 78 ~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~---------~~iag~~l~Gvg--aG 146 (599)
T PF06609_consen 78 DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMN---------TFIAGMVLYGVG--AG 146 (599)
T ss_pred ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHH---------HHHHHHHHHHHh--hH
Confidence 3455666778888999999999999999999999999999999988887665554 122223333222 22
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhh
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVF 494 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~ 494 (523)
...+....++|+.|.+.|..+.++.....-+...+++.+...+....+|||.|+++.++..+..++.+
T Consensus 147 ~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 147 VQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 22233445799999999998887766555455555666666555566899999988887766655443
No 144
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.00 E-value=9.4e-09 Score=111.74 Aligned_cols=140 Identities=19% Similarity=0.186 Sum_probs=106.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
....++.....+..++..+++|.++||+.||++++.+-++.+++.+++.+..... ..+.+ .++++.++.+++...
T Consensus 45 ~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~----~~~~~-~Ll~~~fl~g~~~a~ 119 (524)
T PF05977_consen 45 LMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFG----LLSPW-LLLILTFLLGIGSAF 119 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhC----cCCHH-HHHHHHHHHHHHHHH
Confidence 4556666777788888999999999999999999998887776655555433222 11112 234444455555666
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHH
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWV 491 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v 491 (523)
..|...+++.|+.|.+....+.++.++..++..++||.++|.++..+|...+|.+-++..++..+
T Consensus 120 ~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~ 184 (524)
T PF05977_consen 120 FNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISIL 184 (524)
T ss_pred HHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777788899999999999999999999999999999999999999988888776665544433
No 145
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.99 E-value=1.9e-08 Score=105.52 Aligned_cols=170 Identities=12% Similarity=0.061 Sum_probs=102.2
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
+...+..++|.++.+ ++|++. ....+...+..+..+++.++.|+++||+|||+.++.+.++.+++...+..
T Consensus 17 ~~~~~~~~~~~~~~~--------~~g~s~-~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~ 87 (396)
T TIGR00882 17 IMSAYFPFFPIWLHD--------VNGLSK-TDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFI 87 (396)
T ss_pred HHHHHHHHHHHHHHH--------hcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 455667788888765 345555 56667788999999999999999999999999998776655443332221
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
..... ......+...++..++.++......+....+..+.- +.++..++.......+|.++++.+.+.+.+ .+|+
T Consensus 88 ~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~ 162 (396)
T TIGR00882 88 YVFGP--LLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQ 162 (396)
T ss_pred HHhhh--HHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCch
Confidence 11000 000001111111122222222222333333333332 233446677777888999999999887754 5898
Q ss_pred hHHHHHHHHHHHHHHHhheeccCC
Q 009862 477 GAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 477 ~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
..|++.+++.++..++.++..|+.
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 163 IVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCC
Confidence 888888777776665555544543
No 146
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.98 E-value=1.4e-08 Score=110.75 Aligned_cols=139 Identities=20% Similarity=0.231 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhcccc
Q 009862 350 FLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGP 429 (523)
Q Consensus 350 ~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 429 (523)
.++.++..++.+++.+++|+++|++|||+.++++.+...+..++.+++.+.. .+++..++.++..++...
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~----------~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWY----------QLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHH----------HHHHHHHHhccchhhhhh
Confidence 6778899999999999999999999999999999999999988888776554 455555555555555556
Q ss_pred ccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 430 IPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS--IGLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 430 i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~--~G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
+...+++|+.|++.||...++......+|..++ ++.+..... .+|+..+.+..+.+++..+. .+++||+
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pes 232 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPES 232 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 666889999999999999999999988777777 555555554 38988888888888777777 7778987
No 147
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.97 E-value=1.6e-08 Score=108.18 Aligned_cols=166 Identities=15% Similarity=0.088 Sum_probs=128.7
Q ss_pred ccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHH
Q 009862 340 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIY 419 (523)
Q Consensus 340 ~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~ 419 (523)
++..+.. ...++......+.+++.+..++++||+|-|+++.++.++.+++.++.-++.... .+ .++++.++
T Consensus 67 ~~~ws~~-~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~-------~~-~~~~~R~l 137 (466)
T KOG2532|consen 67 EYDWSST-EKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG-------FY-LLLVLRFL 137 (466)
T ss_pred eecCCHH-HHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc-------ch-hhHHHHHH
Confidence 5666664 445556678899999999999999999999999999998888877766554433 11 34556666
Q ss_pred HHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCchhHHHHHHHHHHHHHHHhheecc
Q 009862 420 FCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS-IGLAGAFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 420 ~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~-~G~~~~f~i~~i~~~i~~v~~~~~lp 498 (523)
.++......|....+.+.+.|++.|++..++......+|.+++-.+.|++.+. +||+.+|.+++++.++..++.+++..
T Consensus 138 qGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 138 QGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred hHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 66666666677778889999999999999999999999999999999999998 99999999999999888777666654
Q ss_pred CC----CCCCHHHHHHHHhc
Q 009862 499 ET----KGMPLEVITEFFAV 514 (523)
Q Consensus 499 Et----k~~~le~i~~~~~~ 514 (523)
+. +..+.+|.+...+.
T Consensus 218 d~P~~h~~is~~El~~I~~~ 237 (466)
T KOG2532|consen 218 DSPSKHPNISEKELKYIEKG 237 (466)
T ss_pred CCcccCCCCCHHHHHHHHhc
Confidence 33 33344454444333
No 148
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.97 E-value=2e-08 Score=108.29 Aligned_cols=122 Identities=15% Similarity=0.097 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccc
Q 009862 349 SFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYG 428 (523)
Q Consensus 349 ~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 428 (523)
...+..+..+..+++.+++++++||+|||+.+++++++.+++.+.+.+..... ....+..++...+ .++......
T Consensus 268 ~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~l-~g~~~~~~~ 342 (473)
T PRK10429 268 FPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAA----PHNALLIVIAGIL-LNIGTALFW 342 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccC----chhHHHHHHHHHH-HHHHHHHHH
Confidence 33445566678889999999999999999999887776555544433211101 1111222222222 222333334
Q ss_pred cccceeeecccC-----c--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 009862 429 PIPNILCAEIFP-----T--KVRGICIAICAMAYWICDIIVTYTLPVMLSSIGL 475 (523)
Q Consensus 429 ~i~~~~~aElfP-----~--~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~ 475 (523)
+..+++.+|+.+ + +..|..+|+..++..++..+++.+.+.+++..|+
T Consensus 343 ~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 343 VLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 555667788844 3 4456778888999999999999999999987765
No 149
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.96 E-value=1.5e-09 Score=110.38 Aligned_cols=148 Identities=16% Similarity=0.125 Sum_probs=129.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
....++.....+.+++..++.|.++||+|+|..++++++++..+.+++++...+. ..++...+.+...++
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~----------~l~vAR~LQgvgsA~ 175 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYP----------MLFVARSLQGVGSAF 175 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhH----------HHHHHHHHhhhhHHH
Confidence 5667777888999999999999999999999999999999999999998877666 666777777777777
Q ss_pred cccccceeeecccCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCCCCC
Q 009862 427 YGPIPNILCAEIFPTKV-RGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMP 504 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~-Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~ 504 (523)
......+++++.||.+. |++++|+.-.+..+|.+++|.+++++.+..|...+|.+.++++++...+.++.++.++..+
T Consensus 176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred HHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 77777788899999875 7999999999999999999999999999999999999999999999988888777665544
No 150
>PRK10504 putative transporter; Provisional
Probab=98.96 E-value=1.3e-08 Score=109.17 Aligned_cols=142 Identities=13% Similarity=0.115 Sum_probs=94.8
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
.....++.|.+++. .+|.+. ....+......++.+++.++.++++||+|||++++++.++.++..+++.+.
T Consensus 277 ~~~~~~~~~~~~~~--------~~g~~~-~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
T PRK10504 277 SGMLPFMTPVFLQI--------GLGFSP-FHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLV 347 (471)
T ss_pred HHHHHHHHHHHHHH--------HcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhc
Confidence 44556678888775 234444 455555666777778888999999999999999988877776665554432
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGL 475 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~ 475 (523)
.. .. ..+...+...+.+.+.+... +....+..+.+|.+.|+++.++.++...+|..+++.+.+.+.+..|+
T Consensus 348 ~~----~~--~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 348 AL----LG--WYYLLPFVLFLQGMVNSTRF-SSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred cc----cc--cHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 11 01 11111111222222222222 23335567889999999999999999999999999999999887765
No 151
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.96 E-value=1.3e-08 Score=104.75 Aligned_cols=182 Identities=16% Similarity=0.158 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHH
Q 009862 304 LVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTT 383 (523)
Q Consensus 304 li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~ 383 (523)
+..+++..+....|.+++......+... .+|++. .+..++.....+..+++++++|+|.||+|-|+++.++
T Consensus 254 i~~FLiA~~~~~DGv~til~~~~~fg~~--------~~gls~-~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~ 324 (438)
T COG2270 254 LVLFLIARFFYIDGVNTILAMGGVFGAA--------DLGLSS-TELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIG 324 (438)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHH--------HcCccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHH
Confidence 3333333344444677777777777763 355655 5677778888999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHH
Q 009862 384 IPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVT 463 (523)
Q Consensus 384 ~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~ 463 (523)
+++..+.++...+...- ..+....++.+.+.++.....-.+.+++.|++.-++.+|++++.++..++++|
T Consensus 325 lvi~~~~~~~~~~~~~~----------~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp 394 (438)
T COG2270 325 LVILSIAALYLIFLEGE----------LDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGP 394 (438)
T ss_pred HHHHHHHHHHHHHcccc----------HHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHH
Confidence 77766555544322111 13344444555566666777778889999999999999999999999999999
Q ss_pred HHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCCCCC
Q 009862 464 YTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMP 504 (523)
Q Consensus 464 ~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~ 504 (523)
.+.+.+.+..|....-....++.+...++.++++|+.+.++
T Consensus 395 ~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~~~~~ 435 (438)
T COG2270 395 FLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVPGRRE 435 (438)
T ss_pred HHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCCCCcc
Confidence 99999999887644444444445555666677777665443
No 152
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.96 E-value=3.6e-08 Score=103.82 Aligned_cols=143 Identities=13% Similarity=0.063 Sum_probs=84.3
Q ss_pred cCCCchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHH--
Q 009862 341 LGISSESASFLIS-AFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVI-- 417 (523)
Q Consensus 341 lgls~~~~~~l~~-~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~-- 417 (523)
+|++. ....++. ....++.+++.++++++.||+|||+.+.++.++.+++.+.+....... . ..+...+...
T Consensus 240 ~G~~~-~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~--~---~~~~~~~~~~~~ 313 (402)
T PRK11902 240 AGFSA-GEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTP--K---HLWTMALAIGIE 313 (402)
T ss_pred cCCCH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC--C---cHHHHHHHHHHH
Confidence 44444 3333343 334456789999999999999999987766665554443332211110 0 1112222221
Q ss_pred -HHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHh
Q 009862 418 -IYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFV 493 (523)
Q Consensus 418 -~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~ 493 (523)
++.++......+....++.+.+|.+. .++.+....++.++++.+.+.+.+.+||...|.+.++++++..++.
T Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 314 NLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 12222223333444456677777554 4555556677887777889999999999888888777776665544
No 153
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.95 E-value=2.7e-08 Score=108.17 Aligned_cols=162 Identities=15% Similarity=0.142 Sum_probs=115.7
Q ss_pred hhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 321 VLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETL 400 (523)
Q Consensus 321 i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~ 400 (523)
+...+|.+.++ .++.++ ....++....+++.+++.++.+++.+|+++++++..+.++.+++++.+++..+.
T Consensus 237 ~~aLlPl~a~~--------~l~~~a-~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~ 307 (524)
T PF05977_consen 237 VWALLPLFARD--------VLGGGA-SGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSF 307 (524)
T ss_pred HHHhhhHHHHH--------HhCCcH-HHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHH
Confidence 34457877765 355555 455667778899999999999999999999998888888888777776655443
Q ss_pred hccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHH
Q 009862 401 QLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFG 480 (523)
Q Consensus 401 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~ 480 (523)
+ ...+.+ ++.++..........+.+.+..|.+.||+.++++.+....+..+|..+.|.+.+.+|...++.
T Consensus 308 ~---------~~~~~l-~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~ 377 (524)
T PF05977_consen 308 W---------LALIAL-FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALL 377 (524)
T ss_pred H---------HHHHHH-HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 3 222222 333333333334444666889999999999999999999999999999999999999888877
Q ss_pred HHHHHHHHHHHHhh-eeccCCC
Q 009862 481 VYAVVCFISWVFVF-LRVPETK 501 (523)
Q Consensus 481 i~~i~~~i~~v~~~-~~lpEtk 501 (523)
+.+++.++..++.+ +.+|+.+
T Consensus 378 ~a~~~lll~~~~~~~~~l~~~~ 399 (524)
T PF05977_consen 378 IAGAALLLSALIALRFPLRQGE 399 (524)
T ss_pred HHHHHHHHHHHHHHHhcCcccc
Confidence 66655544444433 3344443
No 154
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.95 E-value=4.8e-08 Score=99.52 Aligned_cols=161 Identities=12% Similarity=0.057 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHH
Q 009862 302 ALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLL 381 (523)
Q Consensus 302 ~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll 381 (523)
.++++.+..+ .....-.++..|.+.|+.+.. .+|++. .........+..+.+++.++.++++||+|+|+++.
T Consensus 141 ~~~l~~~~~f-~yvg~e~~~~~w~~~yl~~~~------~~g~s~-~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~ 212 (310)
T TIGR01272 141 HLVLGALGIF-VYVGAEVSAGSFLVNFLSDPH------ALGLPE-DQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLA 212 (310)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcc------cCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 3444433333 333334577889999997521 245555 45556677888899999999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHH
Q 009862 382 TTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDII 461 (523)
Q Consensus 382 ~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~ii 461 (523)
++.++.+++.+++..... . .....+. ..+++.....|.......+.+|.+ .+++.++. ....+|+++
T Consensus 213 ~~~~l~~~~~~l~~~~~~-~---------~~~~~~~-l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i 279 (310)
T TIGR01272 213 FNAFLAVLLSIGAALTHG-Y---------VAMWFVL-ALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAI 279 (310)
T ss_pred HHHHHHHHHHHHHHHcCC-H---------HHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchH
Confidence 776666655543322111 0 1122222 233444444455445556767754 45566664 567799999
Q ss_pred HHHHHHHHHHhhCchhHHHHHH
Q 009862 462 VTYTLPVMLSSIGLAGAFGVYA 483 (523)
Q Consensus 462 g~~l~~~l~~~~G~~~~f~i~~ 483 (523)
.|.+.|.+.+..|.+.++++..
T Consensus 280 ~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 280 VPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHHHHHHHHhccchHHHHHHH
Confidence 9999999999999877765333
No 155
>PRK09848 glucuronide transporter; Provisional
Probab=98.95 E-value=1.8e-08 Score=107.62 Aligned_cols=141 Identities=9% Similarity=0.018 Sum_probs=88.0
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
+.....+.|.+++. .+|.+. ....+......++.+++.++.++++||+|+|+++.++.++++++.+.+.+.
T Consensus 244 ~~~~~~~~~~~~~~--------~~g~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~ 314 (448)
T PRK09848 244 TFAVSASSLFYVRY--------VLNDTG-LFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV 314 (448)
T ss_pred HHHHhhhheeeEee--------ecCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc
Confidence 34444555666554 234333 333333333456677889999999999999999998887776665554432
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCc-------chhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPT-------KVRGICIAICAMAYWICDIIVTYTLPVML 470 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~-------~~Rg~a~gi~~~~~~lG~iig~~l~~~l~ 470 (523)
.. ...+..++...+. ++......+..+++.+|..|. +.+|...|+.++...+|..+++.+.+.++
T Consensus 315 ~~-------~~~~~~~~~~~l~-g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 315 SV-------WSLPVALVALAIA-SIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred Cc-------hhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1112222222222 222223334455666676653 45699999999999999999999999998
Q ss_pred HhhCc
Q 009862 471 SSIGL 475 (523)
Q Consensus 471 ~~~G~ 475 (523)
+..|+
T Consensus 387 ~~~G~ 391 (448)
T PRK09848 387 GLSGY 391 (448)
T ss_pred HHcCC
Confidence 87665
No 156
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.95 E-value=6.3e-08 Score=100.36 Aligned_cols=157 Identities=18% Similarity=0.178 Sum_probs=91.9
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
++....+.|.++++ .+|.+. ...........++.+++.++.+++.||+|||+.+..+..+..++.+++...
T Consensus 222 ~~~~~~~~~~~~~~--------~~g~~~-~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (385)
T TIGR00710 222 FFAFFSGAPFVYID--------IMGVSP-SVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEIT 292 (385)
T ss_pred HHHHHHcChHHHHH--------HcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777888764 244444 455556667788899999999999999999998887776666655544432
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
.... ...+..++...++.+.......+....+..|.+| +.|+++.++.+.....++.+.+.+.+.+.+..+ .
T Consensus 293 ~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~--~ 364 (385)
T TIGR00710 293 AILG-----LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHGNTA--W 364 (385)
T ss_pred HHhc-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccccCh--H
Confidence 2111 0011122222222222222233444455677777 578999999888877666565555554433323 3
Q ss_pred HHHHHHHHHHHHHH
Q 009862 478 AFGVYAVVCFISWV 491 (523)
Q Consensus 478 ~f~i~~i~~~i~~v 491 (523)
.+.++..++.+..+
T Consensus 365 ~~~~~~~~~~~~~~ 378 (385)
T TIGR00710 365 PMSLSCLVLAVVSV 378 (385)
T ss_pred HHHHHHHHHHHHHH
Confidence 34343443333333
No 157
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.95 E-value=7.1e-08 Score=101.64 Aligned_cols=167 Identities=14% Similarity=0.119 Sum_probs=109.9
Q ss_pred hhhhhhchHHHHHhcC-chhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAG-VEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G-~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
......|.+.++++.| . +. .......++..+..++.-.+.+++..|+|-|++++++++..++=..+++.
T Consensus 223 ~~~~~~f~~~yl~~~gg~---------~~-~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~ 292 (400)
T PF03825_consen 223 HAAYYTFFSIYLQELGGY---------SG-STIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAY 292 (400)
T ss_pred HHHHHHHHHHHHHHcccc---------hh-hHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 4455677888888865 3 22 34444555777889999999999999999999999998888777666654
Q ss_pred HHhhhccchhhhHHHHHHH-HHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHH-HHHHHHHHHHHHHHHHHhhC
Q 009862 397 SETLQLISPVLKAGISTAC-VIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMA-YWICDIIVTYTLPVMLSSIG 474 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~-~~lG~iig~~l~~~l~~~~G 474 (523)
..... ...+...++ ..+.+..++..... ...++.+..|++.|+++.+++++. ..+|..++..++|++.+.+|
T Consensus 293 ~~~~~-----~~~~~~~~l~q~lhG~tf~~~~~a-~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 293 FSDPW-----PFIVALQLLGQLLHGLTFGLFHAA-SVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred hcCCc-----HHHHHHHHHHHhhhhHHHHHHHHH-HHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 41111 000011111 12234444433333 336778999999999999998765 56999999999999999887
Q ss_pred chh------HHHHHHHHHHHHHHHhheeccCC
Q 009862 475 LAG------AFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 475 ~~~------~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
.+. .+.+.+++.++..++.+++.||+
T Consensus 367 ~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 367 ARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 554 33444444444445555545554
No 158
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.94 E-value=3.9e-08 Score=102.88 Aligned_cols=140 Identities=15% Similarity=0.203 Sum_probs=83.9
Q ss_pred hhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHh
Q 009862 320 GVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISET 399 (523)
Q Consensus 320 ~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~ 399 (523)
.+..+.|.++.+ ++|++. ........+..++.+++.++.+++.||+|||+.+++++++..++.+++.+...
T Consensus 221 ~~~~~~~~~~~~--------~~g~~~-~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (392)
T PRK10473 221 TFVNTSPVLLME--------QMGFSR-GEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPS 291 (392)
T ss_pred HHHHhCHHHHHH--------HcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666654 245544 34455566778888899999999999999999988887777666655544322
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHH
Q 009862 400 LQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAF 479 (523)
Q Consensus 400 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f 479 (523)
.. ...+...+...+++.++.. .+..++.|.+.|+ +..+....++..+++.+.+.+.+.+|+....
T Consensus 292 ~~---------~~~~~~~l~~~g~~~~~~~---~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~ 356 (392)
T PRK10473 292 HA---------VSLFGITLICAGFSVGFGV---AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWN 356 (392)
T ss_pred HH---------HHHHHHHHHHHHHHHHhHH---HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Confidence 11 1122222222222222221 2224455655553 4444556788888888888888888876544
Q ss_pred HHHH
Q 009862 480 GVYA 483 (523)
Q Consensus 480 ~i~~ 483 (523)
.+.+
T Consensus 357 ~~~~ 360 (392)
T PRK10473 357 MLIG 360 (392)
T ss_pred HHHH
Confidence 4333
No 159
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.93 E-value=1e-07 Score=99.60 Aligned_cols=148 Identities=17% Similarity=0.089 Sum_probs=93.7
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
+.....+.|.++++.|. +. ........+..++.++..++.+++.||+|+|+++..+.++.+++.+.+...
T Consensus 221 ~~~~~~~~~~~~~~~g~---------s~-~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~ 290 (382)
T PRK11128 221 HAAYYGFSAIYWQAAGY---------SA-STIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST 290 (382)
T ss_pred hHhHHHHHHHHHHHCCC---------CH-hHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 34455666777766443 34 344445557777888899999999999999999888887777766554433
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHH-HHHHHHHHHHHHHHHHHHHhhCch
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICA-MAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~-~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
.+. +..++..++.+.+++.. .+....++.+. +...+++..++.+ ....+|..+++.+.|.+.+.+|+
T Consensus 291 ~~~---------~~~~~~~~l~g~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~- 358 (382)
T PRK11128 291 TAL---------PWLIVIQILHCGTFTVC-HLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA- 358 (382)
T ss_pred hhH---------HHHHHHHHHHHHHHHHH-HHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-
Confidence 222 12233333333333332 23333445565 4555688888876 44567778999999999999886
Q ss_pred hHHHHHHHHHH
Q 009862 477 GAFGVYAVVCF 487 (523)
Q Consensus 477 ~~f~i~~i~~~ 487 (523)
..+++.+++.+
T Consensus 359 ~~~~~~~~~~~ 369 (382)
T PRK11128 359 GVFWVMALVAL 369 (382)
T ss_pred HHHHHHHHHHH
Confidence 34444444443
No 160
>PRK09669 putative symporter YagG; Provisional
Probab=98.93 E-value=3.8e-08 Score=105.08 Aligned_cols=117 Identities=11% Similarity=0.081 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccc
Q 009862 351 LISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPI 430 (523)
Q Consensus 351 l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i 430 (523)
.......+..+++.+++++++||+|||+.+.++.++.+++.+.+.+... ...+.. ++..++.++......++
T Consensus 268 ~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~i~g~~~~~~~~~ 339 (444)
T PRK09669 268 LFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPP-------SNVWLI-FALNILFNFIQNLTTPL 339 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCc-------chHHHH-HHHHHHHHHHHHHHHHH
Confidence 3444556777888899999999999999988777655543333322110 111122 22223333333445566
Q ss_pred cceeeecccC-------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 009862 431 PNILCAEIFP-------TKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGL 475 (523)
Q Consensus 431 ~~~~~aElfP-------~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~ 475 (523)
.+++++|+.+ .+..|...++.+++..+|..+++.+.+.+++..|+
T Consensus 340 ~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 340 QWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7778888874 34457788999999999999999999999988776
No 161
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.92 E-value=6.6e-08 Score=101.09 Aligned_cols=158 Identities=15% Similarity=0.116 Sum_probs=94.5
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 398 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~ 398 (523)
+....|.+.++.+ ..|++. ....+...+..++.+++.++.+++.||+|+|+++..+..+.+++.+++....
T Consensus 216 ~~~~~~~~~~~~~--------~~g~s~-~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~ 286 (382)
T PRK10091 216 FAWFSYIKPYMMF--------ISGFSE-TSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFG 286 (382)
T ss_pred HHHHHHHHHHHHH--------hcCCCH-HHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555554 234444 4566667788889999999999999999999988887776666554443221
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCchh
Q 009862 399 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS-IGLAG 477 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~-~G~~~ 477 (523)
... +..++..++..........+.......+..|.+.++.+ ..+....+|.+++|.+.+.+.+. .++..
T Consensus 287 ~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~ 356 (382)
T PRK10091 287 GMK--------TASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNY 356 (382)
T ss_pred hhH--------HHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcch
Confidence 111 11222222222222222222222233455555555544 44677899999999999999985 57877
Q ss_pred HHHHHHHHHHHHHHHhhe
Q 009862 478 AFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~ 495 (523)
.+.+.++++.+......+
T Consensus 357 ~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 357 VALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777666555544444333
No 162
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.92 E-value=1.5e-08 Score=104.64 Aligned_cols=155 Identities=10% Similarity=-0.093 Sum_probs=89.2
Q ss_pred HHHHhccchhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 009862 291 WAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKL 370 (523)
Q Consensus 291 ~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~L 370 (523)
++.+++++..+.++..++..++..+ +++....+.|.++++.|+ +.............+..+++.++++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~---------~~~~~g~~~~~~~~~~~~~g~~~~g~l 268 (356)
T TIGR00901 199 IREFFQRKNMIQALLLLLLIVLYKL-GDSAATVLTTLFLLDMGF---------SKEEIALVAKINGLLGAILGGLIGGII 268 (356)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCC---------CHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 4455554332234444444343333 356677888888877544 343333333333446778999999999
Q ss_pred HHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccc--hhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHH
Q 009862 371 MDVAGRRKLLLTTIPVLIVSLIILVISETLQLIS--PVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICI 448 (523)
Q Consensus 371 sDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~ 448 (523)
+||+|||+.+++++++.++...++.+.....+.. .....+ .++...++..+......+....+..|.+|++.|++.+
T Consensus 269 ~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~ 347 (356)
T TIGR00901 269 MQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLL-MLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQM 347 (356)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHH-HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHH
Confidence 9999999988887777666555443321110000 001111 2222222323333344455567789999999999999
Q ss_pred HHHHHHHH
Q 009862 449 AICAMAYW 456 (523)
Q Consensus 449 gi~~~~~~ 456 (523)
|+.+...+
T Consensus 348 g~~~~~~~ 355 (356)
T TIGR00901 348 ALLSSLSA 355 (356)
T ss_pred HHHHHHHh
Confidence 99776654
No 163
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.91 E-value=8e-08 Score=101.12 Aligned_cols=165 Identities=12% Similarity=-0.047 Sum_probs=96.4
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 398 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~ 398 (523)
.....+.|.++.+ .++++. ....+......++.+++.++.++++||+++|+.+.++.++.++..+++.+..
T Consensus 232 ~~~~~~~p~~~~~--------~~g~~~-~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~ 302 (406)
T PRK15402 232 LAWIALSPVILIS--------GEQLSS-YEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALAT 302 (406)
T ss_pred HHHHHHhHHHHHH--------HhCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445567777654 244444 3333444455567888999999999999999988887776666655554432
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhH
Q 009862 399 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGA 478 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~ 478 (523)
... .. ..+..++..+++..+.+... +...... ...+++.|++..++.++...++..+++.+.+.+.+..++...
T Consensus 303 ~~~-~~---~~~~~~~~~~~~g~g~~~~~-~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 376 (406)
T PRK15402 303 VIS-SH---AYLWLTAGLSLYAFGIGLAN-AGLYRLT-LFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLF 376 (406)
T ss_pred Hcc-cc---cHHHHHHHHHHHHHHHHHHh-hhHHHHH-hhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHH
Confidence 111 00 11112222222322222222 2222222 223347899999999999999999999999998887776544
Q ss_pred HHHHHHHHHHHHHHhheecc
Q 009862 479 FGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 479 f~i~~i~~~i~~v~~~~~lp 498 (523)
.+...+..++..++..++.+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK15402 377 NLFNLANGLLWLLLVRIFLK 396 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 44433333333333333333
No 164
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.90 E-value=3.8e-08 Score=101.75 Aligned_cols=141 Identities=16% Similarity=0.074 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeec
Q 009862 358 FLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAE 437 (523)
Q Consensus 358 l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aE 437 (523)
+...++.++.|+++||+|||++++.+.++.+++.+++.+..++. .... .....+++..++.+.......+....++.|
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~ 123 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYA-TIGI-WAPILLLLARLIQGFSLGGEWGGAALYLAE 123 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChh-hhHH-HHHHHHHHHHHHHHhhccccccccHHHhhh
Confidence 34456889999999999999999999888888777766544332 0000 001122333333344444445555677899
Q ss_pred ccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH--------HhhCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 438 IFPTKVRGICIAICAMAYWICDIIVTYTLPVML--------SSIGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 438 lfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~--------~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
.+|.+.|++..++......+|.++++.+.+.+. ...+|+..+.+.++++++..+ .....||++
T Consensus 124 ~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~ 194 (394)
T TIGR00883 124 YAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLY-LRRNLEETP 194 (394)
T ss_pred cCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHH-HHHhcCCCh
Confidence 999999999999999999999999988877654 345788887766555544433 333455543
No 165
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.85 E-value=2.5e-07 Score=97.29 Aligned_cols=156 Identities=13% Similarity=0.080 Sum_probs=90.9
Q ss_pred hhhhhhch-HHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYT-PQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 318 ~~~i~~~~-p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
.+....|. |.+.++.|+ +. ...........++.+++.++.+++.||.+|+ .++.+..+..++.+.+..
T Consensus 232 ~~~~~~~~~p~~~~~~g~---------s~-~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-~l~~~~~~~~~~~~~l~~ 300 (394)
T PRK10213 232 QFAFFTYIRPVYMNLAGF---------GV-DGLTLVLLSFGIASFVGTSLSSFILKRSVKL-ALAGAPLVLAVSALVLTL 300 (394)
T ss_pred HHHHHHHHHHHHHHhcCC---------Ch-hHHHHHHHHHHHHHHHHHHHHHHHHhccchh-HHHHHHHHHHHHHHHHHH
Confidence 33444454 666665443 44 4455556677788899999999999996544 433333333333222221
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLA 476 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~ 476 (523)
... ..+......++++.++. ...+....++.+..|. .++...++......+|..+++.+.+.+.+..|+.
T Consensus 301 ~~~--------~~~~~~~~~~l~G~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~ 370 (394)
T PRK10213 301 WGS--------DKIVATGVAIIWGLTFA-LVPVGWSTWITRSLAD-QAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLT 370 (394)
T ss_pred Hhh--------hHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChh
Confidence 111 11122222233332332 2333333345666664 4567777777888999999999999999998887
Q ss_pred hHHHHHHHHHHHHHHHhh
Q 009862 477 GAFGVYAVVCFISWVFVF 494 (523)
Q Consensus 477 ~~f~i~~i~~~i~~v~~~ 494 (523)
..+...++++++..+++.
T Consensus 371 ~~~~~~~~~~~~~~~~~~ 388 (394)
T PRK10213 371 SPLMLSGTLMLLTALLVT 388 (394)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 777666655555544443
No 166
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.85 E-value=1.8e-08 Score=105.81 Aligned_cols=183 Identities=19% Similarity=0.203 Sum_probs=134.1
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh-hCChH
Q 009862 300 KRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV-AGRRK 378 (523)
Q Consensus 300 ~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr-~GRR~ 378 (523)
.|.+...+.+.+.--|+ ||++...+..|+... + .+.+|++.+....+..+..++++ ...+++||++|| +|+|+
T Consensus 20 Pr~l~~if~vE~WERFs-yYGmraiL~~Yl~~~-~---~~gLg~~~~~A~~l~~~y~slVY-~t~i~GG~laDr~LG~~~ 93 (498)
T COG3104 20 PRGLYLIFFVELWERFS-YYGMRAILILYLYYQ-L---GDGLGFDETHATGLFSAYGSLVY-LTPIIGGWLADRVLGTRR 93 (498)
T ss_pred CchHHHHHHHHHHHHHh-hhhhHHHHHHHHHHh-c---cccCCcChHhhHHHHHHHHHHHH-HHHHHHHHHHHHhcchhH
Confidence 48888888888888885 888887777777542 1 11256888666666665555555 667899999999 59999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcc--hhhHHHHHHHHHHH
Q 009862 379 LLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTK--VRGICIAICAMAYW 456 (523)
Q Consensus 379 lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~--~Rg~a~gi~~~~~~ 456 (523)
.++.+.++.++..++++...... ...+.+...+..+..+.+-+....++.|++|++ .|-.+.++.++..+
T Consensus 94 tI~lGail~~iGh~~L~~~~~~~--------~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iN 165 (498)
T COG3104 94 TIVLGAILMAIGHLVLAISSVSG--------PGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGIN 165 (498)
T ss_pred HHHHHHHHHHHHHHHHhcccccc--------ccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEee
Confidence 99999999999988887543000 012223333333555556666667789999863 37788888899999
Q ss_pred HHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhhee
Q 009862 457 ICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLR 496 (523)
Q Consensus 457 lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~ 496 (523)
+|++++|.+.+++....||...|.+.++-..+..+..++.
T Consensus 166 iGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 166 IGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred hHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999988887777766655543
No 167
>PRK11462 putative transporter; Provisional
Probab=98.84 E-value=2.1e-07 Score=100.13 Aligned_cols=117 Identities=14% Similarity=0.042 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccc
Q 009862 351 LISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPI 430 (523)
Q Consensus 351 l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i 430 (523)
.+..+..++.+++.+++++++||+|+|+++..+..+.++..+++.+.+.. ..+..++..++ .++......++
T Consensus 267 ~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l-~g~~~~~~~~l 338 (460)
T PRK11462 267 AFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQ-------ASITMFVFIFV-IGVLHQLVTPI 338 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchh-------HHHHHHHHHHH-HHHHHHHHHHH
Confidence 34556667788899999999999999988775554443333332221110 01111222222 22233334455
Q ss_pred cceeeecccC-----cchh--hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 009862 431 PNILCAEIFP-----TKVR--GICIAICAMAYWICDIIVTYTLPVMLSSIGL 475 (523)
Q Consensus 431 ~~~~~aElfP-----~~~R--g~a~gi~~~~~~lG~iig~~l~~~l~~~~G~ 475 (523)
.+.+.+|... +..| |..++...++.++|..+++.+.+.+++..|+
T Consensus 339 ~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 339 QWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5566666644 3344 4445666789999999999999999887655
No 168
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.83 E-value=8.5e-08 Score=100.30 Aligned_cols=149 Identities=13% Similarity=0.038 Sum_probs=97.7
Q ss_pred hhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHH-HHHHHHH
Q 009862 316 SGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVL-IVSLIIL 394 (523)
Q Consensus 316 ~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~-~i~~l~l 394 (523)
.++.....++|.++++.|. +. ....+...+..+...++.++.+.++||+|||........+. +++.+.+
T Consensus 18 ~~~~~~~p~l~~~l~~~g~---------s~-~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~ 87 (382)
T TIGR00902 18 CAYGIFLPFFPAWLKGIGL---------GE-EMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAF 87 (382)
T ss_pred HHHHHHHHHHHHHHHHcCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 3455677888999988555 33 56677777888999999999999999999864432222111 1111111
Q ss_pred H-HHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 395 V-ISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 395 ~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
. ...++ + .+++..++.+.+.....|...+++.+ + .+.|++++|.......+|.++++.+.+.+.+.+
T Consensus 88 ~~~~~~~---------~-~l~~~~~l~~~~~~~~~p~~~al~~~-~-~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~ 155 (382)
T TIGR00902 88 SAGAHNA---------W-LLFIAIGLFALFFSAGMPIGDALANT-W-QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF 155 (382)
T ss_pred HHhhhhH---------H-HHHHHHHHHHHHHccchhHHHHHHHH-H-HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1 11111 1 22222332333333345555555444 2 567899999999999999999999999999999
Q ss_pred CchhHHHHHHHHH
Q 009862 474 GLAGAFGVYAVVC 486 (523)
Q Consensus 474 G~~~~f~i~~i~~ 486 (523)
||+..|.+..++.
T Consensus 156 g~~~~f~~~~~~~ 168 (382)
T TIGR00902 156 DEQNILAILTAGL 168 (382)
T ss_pred ChhHHHHHHHHHH
Confidence 9999887766543
No 169
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.82 E-value=6e-08 Score=115.60 Aligned_cols=163 Identities=12% Similarity=-0.084 Sum_probs=101.7
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
.+.+..++|.|+++ .+|.+. ....++.+...++.+++.++.++++++.++++.+..+.++.+++.+.+.+.
T Consensus 241 ~~~~~~~~p~~~~~--------~~g~~~-~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (1140)
T PRK06814 241 GAVVLSQLPLLAKE--------TLGGDE-NVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFA 311 (1140)
T ss_pred HHHHHHHhHHHHHH--------HcCCch-HHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhc
Confidence 34566788999876 245555 455666778889999999999999988877766555555554444433321
Q ss_pred Hhh-hc----------cchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 009862 398 ETL-QL----------ISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTL 466 (523)
Q Consensus 398 ~~~-~~----------~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~ 466 (523)
... .. .......+..++..+++ +++.....+...+++.+.+|.+.||+++|+.+++..++..+++.+.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~ 390 (1140)
T PRK06814 312 SSSVPAEPAQLKSILVFLSKRHGWRILIDLFGL-AAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIIL 390 (1140)
T ss_pred ccccccccccccchhhhhcccccHHHHHHHHHH-HHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHH
Confidence 000 00 00001122222222333 3333333344556778999999999999999999999999999999
Q ss_pred HHHHH-hhCchhHHHHHHHHHHHHH
Q 009862 467 PVMLS-SIGLAGAFGVYAVVCFISW 490 (523)
Q Consensus 467 ~~l~~-~~G~~~~f~i~~i~~~i~~ 490 (523)
+.+.+ ..+....+++.++++++.+
T Consensus 391 g~l~~~~~~~~~~~~~~~~~~~~~~ 415 (1140)
T PRK06814 391 ALLQALGFSIPWIILFIALANLIVA 415 (1140)
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHH
Confidence 88874 3455444544444433333
No 170
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.81 E-value=9.2e-08 Score=99.99 Aligned_cols=162 Identities=11% Similarity=-0.013 Sum_probs=100.9
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHH-HHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTI-PVLIVSLIILV 395 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~-~l~~i~~l~l~ 395 (523)
+...+..++|.++++.|. +. ....+..++..+..+++.++.|.++||+|||....-.. ++..++.+.+.
T Consensus 19 ~~g~~~p~l~~~l~~~g~---------s~-~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 88 (382)
T PRK11128 19 AYGVFLPFWSVWLKGQGY---------TP-ETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFW 88 (382)
T ss_pred HHHHHhhhHHHHHHhcCC---------CH-HHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHH
Confidence 455677788899988554 33 67777788888999999999999999999953211111 11111111111
Q ss_pred HHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 009862 396 ISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGL 475 (523)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~ 475 (523)
.. ..+.+ .+++.....++......+...+++.+. .+.|+.+.+...+...+|.+++|.+.+++.+.+||
T Consensus 89 ~~--------~~~~~-~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~ 157 (382)
T PRK11128 89 FG--------AHSFW-LLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGE 157 (382)
T ss_pred Hh--------cccHH-HHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcCh
Confidence 10 01111 222233333333444455554554444 34578888888889999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhheeccCC
Q 009862 476 AGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 476 ~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
+..|++.++..++..+ ..++.||.
T Consensus 158 ~~~f~~~~~~~~~~~~-~~~~~~~~ 181 (382)
T PRK11128 158 QAILWILTAGVASMLL-GQLLRPTI 181 (382)
T ss_pred hHHHHHHHHHHHHHHH-HHHccCCC
Confidence 9888776654444333 33345654
No 171
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.80 E-value=2.1e-07 Score=99.27 Aligned_cols=144 Identities=14% Similarity=0.082 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhcccc
Q 009862 350 FLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGP 429 (523)
Q Consensus 350 ~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 429 (523)
..+..++.++.++|.++.++++||+|||..++++.++..++.+++.+..... ..-.+++..+..+........
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~-------~~e~li~GR~i~Gl~~gl~~~ 135 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAP-------SFEMLILGRLIVGLACGLSTG 135 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHHHhHHHHH
Confidence 3455678899999999999999999999999988887777766665544332 122344444444434333333
Q ss_pred ccceeeecccCcchhhHHHHHHHHHHHHHHHHHHH-HHHHHHHh-hCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 430 IPNILCAEIFPTKVRGICIAICAMAYWICDIIVTY-TLPVMLSS-IGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 430 i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~-l~~~l~~~-~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
+...|+.|+.|++.||....+..++..+|..++.. ..+.+... ..|...+.+..+.+++..+ ...++||+.
T Consensus 136 ~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~PESP 208 (485)
T KOG0569|consen 136 LVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA-LLPFLPESP 208 (485)
T ss_pred HHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH-HHhcCCCCc
Confidence 44467899999999999999999999999888844 34445433 3465555555555544444 445589973
No 172
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.80 E-value=9.7e-08 Score=102.27 Aligned_cols=229 Identities=12% Similarity=0.025 Sum_probs=139.3
Q ss_pred CCCchhHHHhhhhhhhhhhhhhhhcCCCCCCCCCCCcc-----------ccc--CcccHHHHhccchhhHHHHHHHHHHH
Q 009862 246 PEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSE-----------TAS--KGPSWAALLEAGVKRALLVGVGIQIL 312 (523)
Q Consensus 246 ~~~~~~~~a~~l~~~~~l~~~~~l~E~~~~~~~~~~~~-----------~~~--~~~~~~~L~~~~~~~~~li~~~l~~~ 312 (523)
++..-|+..+++..+..+.......++|.......++| ... ...+|+.+++. ..++..++..+
T Consensus 193 GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts---~~vwai~~~~f- 268 (466)
T KOG2532|consen 193 GWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTS---PPVWAIWISAF- 268 (466)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcC---HHHHHHHHHHH-
Confidence 34445566666655555554445555554432211111 111 24467777774 34444444444
Q ss_pred HHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCC---------hHHHHHH
Q 009862 313 QQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGR---------RKLLLTT 383 (523)
Q Consensus 313 ~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GR---------R~lll~~ 383 (523)
....+++.+..|+|.|+++. ++++- ....+.+++..+.+++..+++|.++||+-+ |..-.++
T Consensus 269 ~~~~~~~~l~~y~PtY~~~V--------L~f~v-~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~ 339 (466)
T KOG2532|consen 269 GGNWGFYLLLTYLPTYLKEV--------LGFDV-RETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIA 339 (466)
T ss_pred HHHHHHHHHHHHhhHHHHHH--------hCCCh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHH
Confidence 44446889999999999983 66666 566677889999999999999999998855 2222344
Q ss_pred HHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeeccc-CcchhhHHHHHHHHHHHHHHHHH
Q 009862 384 IPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIF-PTKVRGICIAICAMAYWICDIIV 462 (523)
Q Consensus 384 ~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElf-P~~~Rg~a~gi~~~~~~lG~iig 462 (523)
..+.+++++++.+..... .+..++++.+..++.+.. ... .+..-.. .++.-+..+|+.+....+.++++
T Consensus 340 ~~~~ai~l~~l~~~~~~~-------~~~a~~~l~~~~~~~g~~--~~G-f~~~~~~~apq~a~~l~g~~~~~~~~~~~~~ 409 (466)
T KOG2532|consen 340 FGGPAVFLLVLAFTSDEH-------RLLAVILLTIAIGLSGFN--ISG-FYKNHQDIAPQHAGFVMGIINFVGALAGFIA 409 (466)
T ss_pred HHHHHHHHHeeeecCCCc-------chHHHHHHHHHHHHcccc--hhh-hHhhhhhccchHHHHHHHHHHHHHHHHHHHH
Confidence 444455555444332211 112222222222222111 111 1122222 56778999999999999999999
Q ss_pred HHHHHHHHH---hhCchhHHHHHHHHHHHHHHHhheec
Q 009862 463 TYTLPVMLS---SIGLAGAFGVYAVVCFISWVFVFLRV 497 (523)
Q Consensus 463 ~~l~~~l~~---~~G~~~~f~i~~i~~~i~~v~~~~~l 497 (523)
|.+.+.+.. ...|+.+|++.+++.++..++..++-
T Consensus 410 P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 410 PLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 999999984 34789999999998888876665553
No 173
>PRK10054 putative transporter; Provisional
Probab=98.80 E-value=1.7e-07 Score=98.69 Aligned_cols=141 Identities=12% Similarity=0.203 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccc
Q 009862 349 SFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYG 428 (523)
Q Consensus 349 ~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 428 (523)
......+..+..++..++.+++.||+++|+.+.+++++.++..+.+.+... ..+...+...++ +.......
T Consensus 246 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~g~~~~~ 316 (395)
T PRK10054 246 VAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGN--------SLLLWGMSAAVF-TVGEIIYA 316 (395)
T ss_pred HHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcch--------HHHHHHHHHHHH-HHHHHHHH
Confidence 334444555566666778899999999999888877666665544432111 011122222222 22223334
Q ss_pred cccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccC
Q 009862 429 PIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPE 499 (523)
Q Consensus 429 ~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpE 499 (523)
|....++.+..|++.|+++.+..+ ..++|..++|.+.+.+.+..|....|.+.+++.+++.++.....+|
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRA 386 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhcccc
Confidence 454566778899999999988755 6779999999999999999998888877777777666666644443
No 174
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.80 E-value=7.2e-08 Score=102.21 Aligned_cols=170 Identities=15% Similarity=0.073 Sum_probs=110.0
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh----hCChH-HHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV----AGRRK-LLLTTIPVLIVSLII 393 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr----~GRR~-lll~~~~l~~i~~l~ 393 (523)
..+..|++.++.+ .+|++. ....++.++..+...+..++.|+++|| +|||+ .++.+.+..+++.++
T Consensus 16 ~~~~~~l~~~~~~--------~~g~s~-~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~ 86 (437)
T TIGR00792 16 AIVSTYLLFFYTD--------VLGLSA-AFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVL 86 (437)
T ss_pred HHHHHHHHHHHHH--------ccCCCH-HHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHH
Confidence 4455566666665 356656 566777778889999999999999998 67744 566676666666665
Q ss_pred HHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeeccc-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 009862 394 LVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIF-PTKVRGICIAICAMAYWICDIIVTYTLPVMLS- 471 (523)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElf-P~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~- 471 (523)
+...+... .....+..++..+++..+... ......++.+|+. +.+.|++..++.+.+..+|.++++.+.+.+..
T Consensus 87 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~ 162 (437)
T TIGR00792 87 LFTTPDFS---ATGKLVYAYITYILLGLFYSF-VNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSY 162 (437)
T ss_pred HHhCCCCC---cchHHHHHHHHHHHHHHHHHh-hcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54433211 111111222222222222232 2222335667876 46889999999888889998888777666654
Q ss_pred ------hhCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 472 ------SIGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 472 ------~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
..+|+..+.++++++++..++.+++.||++
T Consensus 163 ~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 163 FGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred hCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 346888888888888877777777777764
No 175
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.79 E-value=9.7e-08 Score=99.83 Aligned_cols=146 Identities=11% Similarity=0.061 Sum_probs=106.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
.......++..+..++...+..++.+|+|.|+.++++..++++=.+..++.++.. .+..+-++-+.-...
T Consensus 259 ~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~----------~i~~~klLH~~e~~l 328 (412)
T PF01306_consen 259 QMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPW----------VISLIKLLHALEFPL 328 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHH----------HHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchH----------HHHHHHHHHHHHHHH
Confidence 3455566677888899999999999999999999999888888777766554433 233333332222222
Q ss_pred cccccceeeecccCcchhhHHHHHH-HHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCCC
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAIC-AMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~-~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
......-|+++.+|++..++...+. +....+|.++.+.+.|.+.+.+|.+.+|++.+.+.++..++..+.+++.+.
T Consensus 329 ~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 329 LLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 2222236778999999999999886 677889999999999999999999999999999888888888887776554
No 176
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.79 E-value=1.3e-07 Score=97.53 Aligned_cols=138 Identities=12% Similarity=0.044 Sum_probs=91.1
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh-CChHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA-GRRKLLLTTIPVLIVSLIILV 395 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~-GRR~lll~~~~l~~i~~l~l~ 395 (523)
.++.+..|+|.++++.|. +. .......++..++.+++.++.+++.||+ +||+.+.++.++.+++.+.+.
T Consensus 212 ~~~~~~~~lp~~~~~~g~---------~~-~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
T TIGR00896 212 LYYSLIGWLPAILISHGA---------SA-ATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLL 281 (355)
T ss_pred HHHHHHHHHHHHHHHcCC---------CH-HHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Confidence 356677889999887544 33 4556667778899999999999999999 566666666666666555444
Q ss_pred HHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeee-cccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009862 396 ISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCA-EIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG 474 (523)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~a-ElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G 474 (523)
+..... ......++ ++......+.....+. +..+++.++...++.+....++.+++|.+.+.+.+..|
T Consensus 282 ~~~~~~----------~~~~~~l~-g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 282 FAPMHG----------LWAWALVL-GLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HhhhhH----------HHHHHHHH-HHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 322111 11111222 2222222333323333 33456778999999999999999999999999999887
Q ss_pred c
Q 009862 475 L 475 (523)
Q Consensus 475 ~ 475 (523)
.
T Consensus 351 ~ 351 (355)
T TIGR00896 351 N 351 (355)
T ss_pred c
Confidence 4
No 177
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.78 E-value=4.2e-07 Score=94.29 Aligned_cols=133 Identities=16% Similarity=0.176 Sum_probs=75.8
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
+.+.+..+.|.++.+ .+|++. ....+...+..++.+++.++.+++.||+|||+.+..+..+..+..+.+..
T Consensus 209 ~~~~~~~~~~~~~~~--------~~g~s~-~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 279 (377)
T PRK11102 209 GMFSFLTAGPFVYIE--------LNGVSP-QNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVV 279 (377)
T ss_pred HHHHHHHcCHHHHHH--------HhCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 455566677776655 244444 45556667888889999999999999999999988877655444333322
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHH-HHHHHHHHH
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYW-ICDIIVTYT 465 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~-lG~iig~~l 465 (523)
..... ...+...+...++.+..... .+....++.|..| +.|+++.++++.... +|..+++.+
T Consensus 280 ~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 280 SALLD-----LGFWALVVGVAAFVGCVSMI-SSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred HHHHh-----hhHHHHHHHHHHHHHHHHHh-hHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 21111 01111222222222222221 2222234467766 789999998766533 455555544
No 178
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.78 E-value=7.8e-08 Score=103.44 Aligned_cols=152 Identities=11% Similarity=0.020 Sum_probs=120.1
Q ss_pred ccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHH
Q 009862 340 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIY 419 (523)
Q Consensus 340 ~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~ 419 (523)
++++.. ..-..+.+++.++++++.++++.+.||+.-.+.+..+.++.++..++.....++. .++++.++
T Consensus 75 dl~~~~-~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~----------~~ialr~l 143 (495)
T KOG2533|consen 75 DLKLVG-NQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFP----------GLIALRFL 143 (495)
T ss_pred ccchhh-hhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhH----------HHHHHHHH
Confidence 344444 4556677789999999999999999999966666555555555444443333333 56777777
Q ss_pred HHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH------hhCchhHHHHHHHHHHHHHHHh
Q 009862 420 FCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS------SIGLAGAFGVYAVVCFISWVFV 493 (523)
Q Consensus 420 ~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~------~~G~~~~f~i~~i~~~i~~v~~ 493 (523)
.+++..+..|....+++.+|..+.|++-+|+.+....+|+++++.+...+.. ..||++.|++-++++++.++++
T Consensus 144 lGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 144 LGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVV 223 (495)
T ss_pred HHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheE
Confidence 7777777777777888999999999999999999999999999999888643 4589999999999999999999
Q ss_pred heeccCCCC
Q 009862 494 FLRVPETKG 502 (523)
Q Consensus 494 ~~~lpEtk~ 502 (523)
++++|+...
T Consensus 224 f~~lp~~P~ 232 (495)
T KOG2533|consen 224 FFFLPDNPS 232 (495)
T ss_pred EEEecCChh
Confidence 999987644
No 179
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.77 E-value=2.1e-07 Score=97.38 Aligned_cols=178 Identities=15% Similarity=0.026 Sum_probs=111.8
Q ss_pred HHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHH--HHHHHHHHHHHHHHH-HHHHHhhCChHHHHH
Q 009862 306 GVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLI--SAFTTFLMLPCIGVA-MKLMDVAGRRKLLLT 382 (523)
Q Consensus 306 ~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~--~~i~~l~~lig~~l~-g~LsDr~GRR~lll~ 382 (523)
...+++ .|...+.....++|.++++.|. +. ....+. ..+..+..++..++. ++..||+|||+.+++
T Consensus 6 ~~~ly~-~~g~~~~~~~p~lp~~l~~~g~---------~~-~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~ 74 (390)
T TIGR02718 6 LGLLYL-SQGIPIGLAMDALPTLLREDGA---------PL-TALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVL 74 (390)
T ss_pred HHHHHH-HHHhHHHHHHHHHHHHHHHcCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHH
Confidence 334443 4444567778899999998655 34 344443 345566676677777 557899999988755
Q ss_pred HHHHH-HHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHH
Q 009862 383 TIPVL-IVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDII 461 (523)
Q Consensus 383 ~~~l~-~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~ii 461 (523)
.+.+. +++...+.... ... ......+.......++.....+..-.+..|..+.+.++...+.......+|.++
T Consensus 75 ~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~ 148 (390)
T TIGR02718 75 PMQCLVSACLASLALVG----PDV--AGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFG 148 (390)
T ss_pred HHHHHHHHHHHHHHcCC----cch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHH
Confidence 54332 22222222111 000 001112222223334444445555556678888888888888888888999999
Q ss_pred HHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 462 VTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 462 g~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
++...+++.+.+||+..|++.+++.++..+..++..|+.
T Consensus 149 g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~ 187 (390)
T TIGR02718 149 GGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRA 187 (390)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999998888777666665554543
No 180
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.76 E-value=7.7e-08 Score=104.21 Aligned_cols=161 Identities=18% Similarity=0.165 Sum_probs=119.1
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
.+.+..+.+.+.++++ .+. ....++..+......+..++.+.+.||+|.|.+.+++.++.++++++..++
T Consensus 62 ~~~~Gv~~~~~~~~f~---------~s~-~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~ 131 (509)
T KOG2504|consen 62 INSFGLLFEELMDYFG---------SSS-SQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFA 131 (509)
T ss_pred hheehhhHHHHHHHhC---------CCc-cHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 3444455666666543 334 346677778888888889999999999999999999999999999888877
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 477 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~ 477 (523)
.+++ ...+..-++.+.++++.+.|.. +++. .+..+.|+.+.|+......+|.++.|.+.-++++.+||++
T Consensus 132 ~~i~--------~l~lt~gvi~G~G~~~~~~pai-viv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~ 201 (509)
T KOG2504|consen 132 TSLW--------QLYLTFGVIGGLGLGLIYLPAV-VILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRG 201 (509)
T ss_pred hhHH--------HHHHHHHHHhhccchhhhcchh-hhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHH
Confidence 7655 0112222233334444444444 3334 4456779999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhheecc
Q 009862 478 AFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~~~lp 498 (523)
.+++++.+++-+.+....+.|
T Consensus 202 ~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 202 ALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHHHHHHHHHHHHHHHHHcCC
Confidence 999999988777777777666
No 181
>PRK10133 L-fucose transporter; Provisional
Probab=98.76 E-value=4e-07 Score=97.29 Aligned_cols=154 Identities=13% Similarity=0.054 Sum_probs=97.3
Q ss_pred hhhhhhchHHHH-HhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQIL-EQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 318 ~~~i~~~~p~il-~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
.+....|.+.++ ++ .+|++. ....+......++.+++.++++++.||+|||+++..+.++.++.+++..+
T Consensus 274 ~~~~~~~~~~~l~~~--------~~g~s~-~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~ 344 (438)
T PRK10133 274 QTACWSYLIRYAVEE--------IPGMTA-GFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF 344 (438)
T ss_pred HHHHHHHHHHHHhhh--------cCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 344555677664 33 245555 55666677888999999999999999999999888776665544443322
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-c
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG-L 475 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G-~ 475 (523)
... . ..+..+ ...+++.....|.......+.+|.+ .+++.++..+ ..+|+.++|.+.+.+.+..| .
T Consensus 345 ~~~-------~---~~~~~~-~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~ 411 (438)
T PRK10133 345 AGG-------H---VGLIAL-TLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNI 411 (438)
T ss_pred cCC-------h---HHHHHH-HHHHHHHHHHHHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHHhccch
Confidence 111 0 112222 2233333344455556667777764 5677777754 45788899999999999887 6
Q ss_pred hhHHHHHHHHHHHHHHHh
Q 009862 476 AGAFGVYAVVCFISWVFV 493 (523)
Q Consensus 476 ~~~f~i~~i~~~i~~v~~ 493 (523)
+..|++..++.+...++.
T Consensus 412 ~~~~~v~~~~~~~~~~~~ 429 (438)
T PRK10133 412 PTAELIPALCFAVIFIFA 429 (438)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 667765554444444443
No 182
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.75 E-value=4e-07 Score=96.02 Aligned_cols=133 Identities=14% Similarity=0.131 Sum_probs=80.7
Q ss_pred hhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH-hhCChHHHHHHHHHHHHHHHHHHHHHh
Q 009862 321 VLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMD-VAGRRKLLLTTIPVLIVSLIILVISET 399 (523)
Q Consensus 321 i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsD-r~GRR~lll~~~~l~~i~~l~l~~~~~ 399 (523)
...+.|.++++.+. ++ ....+...+..++.++.....+++.| |++.++.++.++++.++..+++.....
T Consensus 227 ~~~~~p~~~~~~~~---------~~-~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~ 296 (400)
T PRK11646 227 VMLMLPIMVNDIAG---------SP-SAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSN 296 (400)
T ss_pred HHHhhhhhHHhhcC---------Cc-hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhh
Confidence 35677888876422 23 33333444444444444444455554 566666666666666655554443322
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 400 LQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 400 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
.. ...+...++..+. ....|....++.+..|.+.|++++|+.+....+|..++|.+.+.+.+..
T Consensus 297 ~~---------~~~~~~~l~~~g~-~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~ 360 (400)
T PRK11646 297 LQ---------QLFTLICLFYIGS-IIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLG 360 (400)
T ss_pred HH---------HHHHHHHHHHHHH-HHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHH
Confidence 21 1222222222222 2333444567789999999999999999999999999999999999875
No 183
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.75 E-value=2.7e-07 Score=99.08 Aligned_cols=142 Identities=16% Similarity=0.115 Sum_probs=96.5
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
.++...++.|.++++ .+|++. ....+......++.+++.++++++.||+|||+++.++.++.+++.+.+.+
T Consensus 270 ~~~~~~~~~p~~~~~--------~~g~s~-~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~ 340 (485)
T TIGR00711 270 GLYGSFYLLPLYLQQ--------VLGYTA-LQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAF 340 (485)
T ss_pred HHHHHHHHHHHHHHH--------hcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 355667888999876 245555 45566677788899999999999999999999988887776666554432
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
... .....+......++.+.+.+....+.. ....+.+|++.|+++.++.++...+|+.+++.+.+.+.+..
T Consensus 341 ~~~-----~~~~~~~~~~~~~l~g~g~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 341 TFT-----PDTPFLAIALPQFIRGFGMGCFFMPLT-TIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred cCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 111111122222222222222223333 33467789999999999999999999999999999888743
No 184
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.75 E-value=1.2e-07 Score=96.65 Aligned_cols=131 Identities=22% Similarity=0.229 Sum_probs=87.9
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
++....+.|.++.+ .++.+..........+..+..+++.++.++++||+++|+.+........++.+.+.+.
T Consensus 222 ~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
T PF07690_consen 222 FSGFSFFLPLYLQE--------VLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLL 293 (352)
T ss_dssp HHHHHHHHHHHCCH--------HHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCS
T ss_pred HHHhhcccchhhhh--------ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888887443 2444412455556677888888889999999999999887777666665555544322
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHH
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVT 463 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~ 463 (523)
... ......++...+ .++......+....++.+.+|++.|+++.|+.+....++.+++|
T Consensus 294 ~~~------~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 294 PFS------SSPVWLIIALFL-IGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHH------CHHHHHHHHHHH-HHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHh------hhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 211 011122222222 33344444566667789999999999999999999999999886
No 185
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.74 E-value=6e-07 Score=96.35 Aligned_cols=252 Identities=14% Similarity=0.100 Sum_probs=148.7
Q ss_pred hhHHHhhhhhhhhhhhhhhhcCCCCCCCCC------CCcccccCcccHHHHhc--cchhhHHHHHHHHHHHHHhhhhhhh
Q 009862 250 EYIQAAALVSQPALYSKELMDQHPVGPAMV------HPSETASKGPSWAALLE--AGVKRALLVGVGIQILQQFSGINGV 321 (523)
Q Consensus 250 ~~~~a~~l~~~~~l~~~~~l~E~~~~~~~~------~~~~~~~~~~~~~~L~~--~~~~~~~li~~~l~~~~~~~g~~~i 321 (523)
-|...++++....+......+|.+...... ++.++......++++++ +...+.+...+.++++..+ +++.+
T Consensus 199 ~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~-a~f~~ 277 (477)
T TIGR01301 199 CFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWI-AWFPF 277 (477)
T ss_pred HHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHH
Confidence 345555556665566666666654311110 00111111112333332 1233556666666666655 46677
Q ss_pred hhchHHHHHhcCchhhh-hccCCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHHHHH
Q 009862 322 LYYTPQILEQAGVEVLL-SNLGIS-SESASFLISAFTTFLMLPCIGVAMKLMDVAGR-RKLLLTTIPVLIVSLIILVISE 398 (523)
Q Consensus 322 ~~~~p~il~~~G~~~~~-~~lgls-~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GR-R~lll~~~~l~~i~~l~l~~~~ 398 (523)
.+|.+.+..+.-+.... ....++ ......+...++++...+.+++.-++.+|+|+ |++..++.++.+++++...+..
T Consensus 278 ~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~ 357 (477)
T TIGR01301 278 ILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVT 357 (477)
T ss_pred HHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 77777776542110000 000000 00113445555666666777778889999994 7777888888888877776544
Q ss_pred hhhc-----------cchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcc--hhhHHHHHHHHHHHHHHHHHHHH
Q 009862 399 TLQL-----------ISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTK--VRGICIAICAMAYWICDIIVTYT 465 (523)
Q Consensus 399 ~~~~-----------~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~--~Rg~a~gi~~~~~~lG~iig~~l 465 (523)
.... ...........++.+...++..+....++++++++..|.+ ..|..+|+.|++.-+.+++....
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~ 437 (477)
T TIGR01301 358 YVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLG 437 (477)
T ss_pred hhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 3210 0000000123344444555556666788889999998854 45999999999999999999998
Q ss_pred HHHHHHhhC--chhHHHHHHHHHHHHHHHhheeccCCCC
Q 009862 466 LPVMLSSIG--LAGAFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 466 ~~~l~~~~G--~~~~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
.+.+.+.+| ...++.+-++..+++++++++.+|+++.
T Consensus 438 ~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 438 SGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 888777776 3346667777778888888898998764
No 186
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.73 E-value=5e-07 Score=95.03 Aligned_cols=155 Identities=12% Similarity=0.109 Sum_probs=95.1
Q ss_pred hhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHh
Q 009862 320 GVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISET 399 (523)
Q Consensus 320 ~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~ 399 (523)
...+..|.++++ .+|.+. ....+......++.+++.++.+++.||.++|+++..+.. .++..+.+.....
T Consensus 223 ~~~~~~~~~~~~--------~lg~s~-~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~ 292 (393)
T PRK11195 223 TLRFLVLAWAPV--------ALGITL-NQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHS 292 (393)
T ss_pred HHHHHHHHHHHH--------HcCCCh-hHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhH
Confidence 334445555554 245555 456666778888999999999999999998887776643 3332222221111
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhH
Q 009862 400 LQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKV-RGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGA 478 (523)
Q Consensus 400 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~-Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~ 478 (523)
.+...+...+.+.+.+....+. .....+..|.+. +|++.++.++..+++..++..+.+.+ ..+|.+..
T Consensus 293 ---------~~~~~~~~~~~G~~~g~~~~~~-~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 361 (393)
T PRK11195 293 ---------LLPAYPLLILIGALGGFFVVPM-NALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVV 361 (393)
T ss_pred ---------HHHHHHHHHHHHHhhhhhhhhH-HHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHH
Confidence 1122222223333333333333 344567666655 79999999999999999999888844 67787777
Q ss_pred HHHHHHHHHHHHHHhhe
Q 009862 479 FGVYAVVCFISWVFVFL 495 (523)
Q Consensus 479 f~i~~i~~~i~~v~~~~ 495 (523)
+.+..+..++.+.+.+.
T Consensus 362 ~~~~~~~~~~~~~~~~~ 378 (393)
T PRK11195 362 AVIVGFGLLVALAMALL 378 (393)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 76655555555444433
No 187
>PRK11043 putative transporter; Provisional
Probab=98.71 E-value=9.8e-07 Score=92.60 Aligned_cols=140 Identities=19% Similarity=0.109 Sum_probs=84.8
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
++.+..+.|.++++.|. +. ....+......++.+++.++.+++.||+|+|+.+....++.+++.+.+...
T Consensus 219 ~~~~~~~~p~~~~~~g~---------s~-~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 288 (401)
T PRK11043 219 FFAWLTGSPFILEQMGY---------SP-ADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLA 288 (401)
T ss_pred HHHHHHHhHHHHHHcCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556678888876444 33 344445556667788899999999999999987766555555444433222
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
.... .. ..+..++...+. ++......+.......+.+| +.|+++.|+.+.....++.+++.+.+.+.+..
T Consensus 289 ~~~~--~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 358 (401)
T PRK11043 289 SLLS--HP--SLVPLLIPFCVM-AAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTP 358 (401)
T ss_pred HHhc--cC--cHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 1111 00 111122222222 22222333443344456666 47999999999998888889998888887643
No 188
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.69 E-value=6.7e-07 Score=97.05 Aligned_cols=140 Identities=15% Similarity=0.018 Sum_probs=95.6
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
.+++..+|.|.+++.. .|++. ..+.+......++..++.++.|+++||+|||+++..+.++.+++.+.+..
T Consensus 274 ~~~~~~~~~~~~lq~v--------~g~s~-~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~ 344 (495)
T PRK14995 274 TLVGFELLMAQELQFV--------HGLSP-LEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAM 344 (495)
T ss_pred HHHHHHHHHHHHHHHH--------cCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 3556677889888762 45555 55666677788889999999999999999999888777766665554432
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS 472 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~ 472 (523)
... .. ..+......++.+.+.+.. .+.....+.+..|.+.++.+.++.++...+|..+++.+.+.+.+.
T Consensus 345 ~~~----~~--~~~~~~~~~~l~G~g~g~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 345 TDF----ST--QQWQAWGLMALLGFSAASA-LLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred hcC----CC--chHHHHHHHHHHHHhHHHH-HHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 211 11 1111222222333233322 233334456788999999999999999999999999999988753
No 189
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.67 E-value=3.2e-10 Score=120.93 Aligned_cols=142 Identities=14% Similarity=0.110 Sum_probs=107.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH---hhhccchhhhHHHHHHHHHHHHHHHh
Q 009862 348 ASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE---TLQLISPVLKAGISTACVIIYFCCFV 424 (523)
Q Consensus 348 ~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~ 424 (523)
...+..+...++.++|.+++|+++||+|||+.++++.++..++.++..+.+ +.. .+.+..++.++..
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~----------~~~~~R~~~G~~~ 116 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFW----------MLLIGRFLIGFGI 116 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccc----------ccccccccccccc
Confidence 456677788899999999999999999999999999998888888777655 332 4455555566666
Q ss_pred hccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 425 AAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI---GLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 425 ~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~---G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
++..++..+++.|..|++.|+...++.+....+|.+++..+...+.... +|+..+.+.++.+++..+ ..+++||+
T Consensus 117 g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pES 194 (451)
T PF00083_consen 117 GGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPES 194 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 6666777789999999999999999998888888888777665543333 377776666666554433 44668987
No 190
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.64 E-value=1.5e-06 Score=92.02 Aligned_cols=134 Identities=7% Similarity=-0.002 Sum_probs=85.6
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE 398 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~ 398 (523)
..+..|++.++++.+. +.+. ...............++.++++++.||+++|+++.++.++.+++++++.+..
T Consensus 249 ~~~~s~l~~y~~~~~~-------~~~~-~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~ 320 (410)
T TIGR00885 249 IMCWTFIIQYAVRLIP-------GMTA-GFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAG 320 (410)
T ss_pred HHHHHHHHHHHhhccC-------CCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3455777887765321 2222 2222233344467789999999999999999998888777777666554322
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 399 TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
.. ....++.+..++.+..+ |..+.+..+.++++.+..+.+++... +|+.+.|.+.|.+.|..
T Consensus 321 ~~----------~~~~~l~~~glf~s~~f-p~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 321 GH----------VGLYCLTLCSAFMSLMF-PTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred Ch----------HHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHh
Confidence 11 12233333333444444 66667777888877665555555443 99999999999999954
No 191
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.64 E-value=5.6e-08 Score=105.26 Aligned_cols=171 Identities=15% Similarity=0.167 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhC--ChHH
Q 009862 302 ALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAG--RRKL 379 (523)
Q Consensus 302 ~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~G--RR~l 379 (523)
+.++.+.+.......+++...+++|.+.++.|+ +. ..+.....+.++..+++.++.|+++|+.. ++.+
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~---------~~-~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~ 367 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGL---------SS-NDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVL 367 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---------Ch-hhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHH
Confidence 444445555555555788888899999887655 34 56666677889999999999999999988 3445
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHH
Q 009862 380 LLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICD 459 (523)
Q Consensus 380 ll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~ 459 (523)
..++.++.+++.+.+.+...+. .++.++++.++..+.+..+...++.|+++.+.-..+.|+..++..++.
T Consensus 368 ~~~~ll~~gl~~~~~p~~~~~~----------~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~ 437 (509)
T KOG2504|consen 368 FLLTLLIAGLARLFLPFATTYV----------GLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGA 437 (509)
T ss_pred HHHHHHHHHHHHHHHHHhccHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHH
Confidence 5556566666554444443332 445555555555555666665677999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhC-chhHHHHHHHHHHHHHHH
Q 009862 460 IIVTYTLPVMLSSIG-LAGAFGVYAVVCFISWVF 492 (523)
Q Consensus 460 iig~~l~~~l~~~~G-~~~~f~i~~i~~~i~~v~ 492 (523)
+++|.+.+.+.+..+ |...|.+..++.++.+++
T Consensus 438 l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~ 471 (509)
T KOG2504|consen 438 LVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVL 471 (509)
T ss_pred HcCcccceeeeeccCCeeeehhhcChHHHHHHHH
Confidence 999999999999888 555555555544444433
No 192
>PRK09669 putative symporter YagG; Provisional
Probab=98.62 E-value=3.8e-07 Score=97.44 Aligned_cols=169 Identities=14% Similarity=0.086 Sum_probs=105.9
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh----hCCh-HHHHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV----AGRR-KLLLTTIPVLIVSLII 393 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr----~GRR-~lll~~~~l~~i~~l~ 393 (523)
..+..|++.++.+ .+|++. .....+..+..+...+..++.|+++|| +||| +.++++.+..+++.++
T Consensus 26 ~~~~~~l~~~~t~--------~~gls~-~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l 96 (444)
T PRK09669 26 QTVMLFLAYFYTD--------VFGLSA-AIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLL 96 (444)
T ss_pred HHHHHHHHHHHHH--------hcCCCH-HHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 4556677777766 466766 566777778888999999999999998 7774 5555666666666554
Q ss_pred HHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeeccc-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009862 394 LVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIF-PTKVRGICIAICAMAYWICDIIVTYTLPVMLSS 472 (523)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElf-P~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~ 472 (523)
+...+... .....+...+..+++..++.....| ..++.+|+. +.+.|.+..++...+..+|..+++.+...+...
T Consensus 97 ~f~~p~~~---~~~~~~~~~~~~~l~~~~~t~~~ip-~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~ 172 (444)
T PRK09669 97 TFYTPDFG---ATGKIIYACVTYILLSLVYTAINVP-YCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDI 172 (444)
T ss_pred HHhCCCCC---cchHHHHHHHHHHHHHHHHHhhcch-HHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43332211 1111222222233333334433333 346678887 457899888888888889888888766555544
Q ss_pred h-------CchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 473 I-------GLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 473 ~-------G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
+ +|...+.+++++++++.+++++..+|.
T Consensus 173 ~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 173 LGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEe
Confidence 3 455566666666666666666655554
No 193
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.57 E-value=8.4e-07 Score=91.45 Aligned_cols=125 Identities=14% Similarity=0.117 Sum_probs=77.3
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
.+.+..+.|.++++ .+|++. ........+..+..+++.+++++++||+|||+.+..+....+++.+++.+.
T Consensus 241 ~~~~~~~~~~~~~~--------~~g~~~-~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 311 (366)
T TIGR00886 241 FLGVSSIFAMFFKD--------QFGLSK-VTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLG 311 (366)
T ss_pred HHHHHHHHHHHHHH--------HcCCcH-HHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhc
Confidence 45667788888876 245555 445556667778888999999999999999887776665555544444322
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHH
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWIC 458 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG 458 (523)
... ....+..+....++..+++.+. +..+.++++++| +.|++++|+.+...++|
T Consensus 312 ~~~-----~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 312 LVS-----PLSLAVFIVLFVALFFFSGAGN-GSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred CCC-----cchHHHHHHHHHHHHHHhcccc-chhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 110 0011122222222223333333 334466788887 68999999988777664
No 194
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.56 E-value=6.6e-07 Score=87.40 Aligned_cols=137 Identities=11% Similarity=0.003 Sum_probs=87.6
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
.+.+....|.++++ .+|+|+.+.....+ .......+.+++.|.++||+||+...+.+..+..+..-...++
T Consensus 280 ~fPFi~lg~~fF~~--------rfGlS~~~a~~i~s-~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F 350 (459)
T KOG4686|consen 280 WFPFITLGPMFFQK--------RFGLSAVSAGNILS-TVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF 350 (459)
T ss_pred HHHHhhhhHHHHHH--------hhCCChhhccchhh-hhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh
Confidence 33444455666655 68888855544444 5556677888999999999999988776655443332222222
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG 474 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G 474 (523)
.... + ...+++++..+... ....|..++-+.|.+.-|+++|+++.+.++|-.+.|++.+.+.+.-|
T Consensus 351 t~ls-------P---y~~m~~lGLsysll-AcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 351 TFLS-------P---YTSMTFLGLSYSLL-ACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred hhcc-------H---HHHHHHHhhhHHHH-HHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 2111 1 22222222222211 11123445677888999999999999999999999999999998766
No 195
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.53 E-value=2.6e-07 Score=99.37 Aligned_cols=216 Identities=12% Similarity=-0.003 Sum_probs=114.5
Q ss_pred CCCchhHHHhhhhhhhhhhhhhhhcCCCC---CCCCCC------Ccccc-----cCcccHHHHhccchhhHHHHHHHHHH
Q 009862 246 PEEGEYIQAAALVSQPALYSKELMDQHPV---GPAMVH------PSETA-----SKGPSWAALLEAGVKRALLVGVGIQI 311 (523)
Q Consensus 246 ~~~~~~~~a~~l~~~~~l~~~~~l~E~~~---~~~~~~------~~~~~-----~~~~~~~~L~~~~~~~~~li~~~l~~ 311 (523)
+.+|-|+..+++....++++...+++.|. +...++ +.++. .+...+..+++--....++...+..+
T Consensus 204 gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~ 283 (495)
T KOG2533|consen 204 GWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYF 283 (495)
T ss_pred CceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHH
Confidence 45566788888888888888888888877 222211 00000 01122333332111233444444444
Q ss_pred HHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh----hCChHHHHHHHHHH
Q 009862 312 LQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV----AGRRKLLLTTIPVL 387 (523)
Q Consensus 312 ~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr----~GRR~lll~~~~l~ 387 (523)
+... ..+++.+|+|.++++. .|++. ..+..+++...++.+++.+++|+++|| +.+|...+....+.
T Consensus 284 ~~~l-v~~~~~~~lpl~l~~~--------~~~s~-~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 284 FLKL-VNYGFSYWLPLYLKSN--------GGYSE-LQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred HHhh-ccccHHHHHHHHHHcC--------CCcCh-HHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 4444 4788999999999981 23333 567778889999999999999999999 55665555544444
Q ss_pred HHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCc-chhhHHHHHHHHHHHHHHHHHHHHH
Q 009862 388 IVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPT-KVRGICIAICAMAYWICDIIVTYTL 466 (523)
Q Consensus 388 ~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~-~~Rg~a~gi~~~~~~lG~iig~~l~ 466 (523)
.+...+........ . .....++..........++....+++.... ..|-+..+.....+..++++++.+.
T Consensus 354 ~~~g~~~l~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~ 424 (495)
T KOG2533|consen 354 AIIGAISLLAAAVL-------P--GAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLF 424 (495)
T ss_pred HHHHHHHHHhhccc-------h--HHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhc
Confidence 33332222111111 0 111111111111112222333334444444 4445555555555566666555554
Q ss_pred HHH-HHhhCchhHHH
Q 009862 467 PVM-LSSIGLAGAFG 480 (523)
Q Consensus 467 ~~l-~~~~G~~~~f~ 480 (523)
... ...++|...|.
T Consensus 425 ~~~~ap~y~~~~~f~ 439 (495)
T KOG2533|consen 425 RSLDAPRYGWGAVFY 439 (495)
T ss_pred ccccCcchhhhhHHH
Confidence 433 33456766763
No 196
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.52 E-value=3.4e-07 Score=95.02 Aligned_cols=154 Identities=16% Similarity=0.091 Sum_probs=105.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
.....+..+..++.++|++++||+.||+|||+++...++++++|.+++++... .++.......+.++..+.++..++
T Consensus 84 ~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~---~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 84 GVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVG---TTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCC---CCCCcchhhHHHHHHHHhhccccC
Confidence 56677888999999999999999999999999999999999988885543221 112212234455566666777778
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh----C-----------chhHHHHHHHHHHHHHH
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI----G-----------LAGAFGVYAVVCFISWV 491 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~----G-----------~~~~f~i~~i~~~i~~v 491 (523)
-.|+..++++|..-.+.||.-++...+...+|...+..+.-.+...+ + ||..+.+-++.+ +...
T Consensus 161 DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa-~~~l 239 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPA-LLVL 239 (538)
T ss_pred CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHH-HHHH
Confidence 88999999999999999999988877766666665555544443321 1 444443333333 3333
Q ss_pred HhheeccCCCCCC
Q 009862 492 FVFLRVPETKGMP 504 (523)
Q Consensus 492 ~~~~~lpEtk~~~ 504 (523)
..-+.+|||+.-+
T Consensus 240 y~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 240 YFRLKMPETARYT 252 (538)
T ss_pred HhhhcCCcchhHH
Confidence 3445578987643
No 197
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.52 E-value=5.5e-06 Score=85.16 Aligned_cols=166 Identities=8% Similarity=-0.026 Sum_probs=114.1
Q ss_pred hhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHh
Q 009862 320 GVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISET 399 (523)
Q Consensus 320 ~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~ 399 (523)
..-...|.+.+.+ +++. .++.++...+..++.+..+.++++.+|+|+|+-++.++.++++.+.++.-+..
T Consensus 31 l~diLip~l~~~f---------~ls~-~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~ 100 (422)
T COG0738 31 LNDILIPHLKEVF---------DLTY-FEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAAS 100 (422)
T ss_pred cchhhHHHHHHHh---------CccH-HHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3445566666554 4444 67788888999999999999999999999999999999999988887653222
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Q 009862 400 LQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS------- 472 (523)
Q Consensus 400 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~------- 472 (523)
.. .+..+++..+..+..........+.++..+.|++..+.-+.+...++.+|++++|.+...++.+
T Consensus 101 ~~-------~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~ 173 (422)
T COG0738 101 SK-------SYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMS 173 (422)
T ss_pred hh-------hHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccC
Confidence 21 1122333222223333334445556778888888788889999999999999999999988763
Q ss_pred ------------hCchhHHHHHHHHHHHHHHHhh-eeccCCCC
Q 009862 473 ------------IGLAGAFGVYAVVCFISWVFVF-LRVPETKG 502 (523)
Q Consensus 473 ------------~G~~~~f~i~~i~~~i~~v~~~-~~lpEtk~ 502 (523)
..++.++...+..++++.+... ...|+.+.
T Consensus 174 ~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~ 216 (422)
T COG0738 174 AAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV 216 (422)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc
Confidence 1255566666666655555443 34465543
No 198
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.51 E-value=2e-06 Score=92.80 Aligned_cols=170 Identities=11% Similarity=0.014 Sum_probs=101.0
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH----hhCC-hHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMD----VAGR-RKLLLTTIPVLIVSLI 392 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsD----r~GR-R~lll~~~~l~~i~~l 392 (523)
+..+..|++.|+.+ .+|++. .....+..+.-+...+..++.|+++| |+|| |+.++++.+.++++++
T Consensus 22 ~~~~~~~l~~yyt~--------v~Gls~-~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 22 IGIVYMYLMYYYTD--------VVGLSV-GLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF 92 (473)
T ss_pred HHHHHHHHHHHHHH--------hcCCCH-HHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence 44556677777766 356666 56666677888899999999999999 5698 5566667766666655
Q ss_pred HHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeeccc-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 393 ILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIF-PTKVRGICIAICAMAYWICDIIVTYTLPVMLS 471 (523)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElf-P~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~ 471 (523)
++...+.. ......+..++..+++..++.... ....++.+|+. ..+.|....++-..+..+|+++.+.+...+..
T Consensus 93 llf~~p~~---~~~~~~~~~~~~~~l~~~~~t~~~-ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~ 168 (473)
T PRK10429 93 LLFSAHLF---EGTAQYVFVCVTYILWGMTYTIMD-IPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVN 168 (473)
T ss_pred HHHcCCCC---CccHHHHHHHHHHHHHHHHHHHHc-chHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54322111 111111112222222323333332 33335668988 57899998888777778877777666554444
Q ss_pred hh-------CchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 472 SI-------GLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 472 ~~-------G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
.. ++.....+++++.+++.+++++..||.
T Consensus 169 ~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 169 YVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 33 233444455555555555666656664
No 199
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.50 E-value=1.3e-06 Score=94.21 Aligned_cols=174 Identities=13% Similarity=0.042 Sum_probs=102.0
Q ss_pred HHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhC-----ChHH
Q 009862 305 VGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAG-----RRKL 379 (523)
Q Consensus 305 i~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~G-----RR~l 379 (523)
+...+.+.+ ... +.+...++.++.+ ++|++. ........+..+...+-. ++|.++||++ ||+.
T Consensus 30 ~~~~~y~~q-Gl~-~l~~~~~~~~l~~--------~lg~s~-~~i~~~~sl~~lpw~~K~-l~g~l~D~~~i~G~rRr~~ 97 (468)
T TIGR00788 30 IGLQVLFVK-GIA-GLMRLPLSPMLTD--------DLGLDG-ARYQRLVGLSSLGWALKP-FAGVMSDTFPLFGYTKRWY 97 (468)
T ss_pred HHHHHHHHh-hHH-HHhhhhhhHHHHH--------hcCCCH-HHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCccchHH
Confidence 333344443 333 4555556666664 355555 344444556667666654 5999999997 7777
Q ss_pred HHHHHHHHH-HHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHH---HHHHHHHH
Q 009862 380 LLTTIPVLI-VSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGIC---IAICAMAY 455 (523)
Q Consensus 380 ll~~~~l~~-i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a---~gi~~~~~ 455 (523)
++++.++.. ++...+.... ......++.+++..+......+..-++..|..+ +.+... .++.....
T Consensus 98 l~~~~~l~~~~~~~~l~~~~---------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~ 167 (468)
T TIGR00788 98 LVLSGLLGSAILYGLLPGKV---------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGAS 167 (468)
T ss_pred HHHHHHHHHHHHHHhccccc---------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHH
Confidence 777765552 2222221100 011112222333333344444555567788888 444443 33333444
Q ss_pred HHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 456 WICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 456 ~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
.+|.++++.+.+.+.+.++|+..|++.+++.++. ++..+++||.+
T Consensus 168 ~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~~ 212 (468)
T TIGR00788 168 ATGGLISSLLGGPLLDKTLTRILFLITAALLLLQ-LFVSNLSKERR 212 (468)
T ss_pred HHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHH-HHHHHhccccc
Confidence 5899999999999999999999998888777766 44455578764
No 200
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.49 E-value=4.6e-06 Score=85.71 Aligned_cols=177 Identities=12% Similarity=0.124 Sum_probs=116.3
Q ss_pred cHHHHhccchhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 009862 290 SWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMK 369 (523)
Q Consensus 290 ~~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~ 369 (523)
....++++++.+...++.+++...+. .+..|++.|+.+. .|++. ..+....+.+..+.++|.+++.+
T Consensus 228 ~~~~l~~~~~~~~gvl~~FlYVG~Ev----a~gsfl~~y~~~~--------~g~~~-~~aa~~~s~~~~~~~vGRFig~~ 294 (422)
T COG0738 228 GLSSLFQNKHLRLGVLAIFLYVGAEV----AIGSFLVSYLEEL--------LGLNE-QQAAYYLSFFWVGFMVGRFIGSA 294 (422)
T ss_pred hHHHHHhChHHHHHHHHHHHHHhHHH----HHHHHHHHHHHhc--------CCccH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777666665555555554433 5677889998872 33444 45566667888899999999999
Q ss_pred HHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHH
Q 009862 370 LMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIA 449 (523)
Q Consensus 370 LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~g 449 (523)
++.|+...+.+.+.+++..+.++...+..... .+...++.+.+.....|..+....+..|. .-.. .|
T Consensus 295 lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v-----------~~~~l~~ig~F~simfPTIfslal~~l~~-~ts~-~s 361 (422)
T COG0738 295 LMSRIKPEKYLAFYALIAILLLLAVALIGGVV-----------ALYALFLIGLFNSIMFPTIFSLALKNLGE-HTSV-GS 361 (422)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHhcChH-----------HHHHHHHHHHHhHHHHHHHHHHHHhccCc-cccc-cc
Confidence 99999988888877766666555555443322 22333334445555556666666777773 2222 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHH
Q 009862 450 ICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVF 492 (523)
Q Consensus 450 i~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~ 492 (523)
......-+|+.+.|.+.|++.+..|....+.+...+|.+..++
T Consensus 362 ~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV~~ 404 (422)
T COG0738 362 GLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYVLF 404 (422)
T ss_pred eeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 2333456889999999999999999877777666666655533
No 201
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.42 E-value=6.3e-06 Score=88.15 Aligned_cols=137 Identities=18% Similarity=0.138 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceee
Q 009862 356 TTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILC 435 (523)
Q Consensus 356 ~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~ 435 (523)
..+..++.+++.|.++||+|||..++...+.+.+-.+++.+.. + +.++ ..-+.+.+. .......+++
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~----------~~~~-~~~l~g~~~-~~~s~~~a~v 137 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-Y----------WFFL-LLGLSGGFS-AIFSVGFAYV 137 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-H----------HHhh-hcccccchh-hhhhhhhhhe
Confidence 4667788899999999999999999988777766655554332 1 1122 222222222 2334445788
Q ss_pred ecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCCCCCCH
Q 009862 436 AEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPL 505 (523)
Q Consensus 436 aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~l 505 (523)
+++...+.|...+|+.+...+.+..++|.+.+.+....|...+|.+..+..++..++..+++||+...+.
T Consensus 138 adis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~ 207 (463)
T KOG2816|consen 138 ADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKE 207 (463)
T ss_pred eeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccc
Confidence 9999999999999999999999999999999999999999899999999999999999999999855443
No 202
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.40 E-value=1e-06 Score=93.58 Aligned_cols=169 Identities=20% Similarity=0.154 Sum_probs=110.6
Q ss_pred hhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH----hhCChHHH-HHHHHHHHHHHHHH
Q 009862 320 GVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMD----VAGRRKLL-LTTIPVLIVSLIIL 394 (523)
Q Consensus 320 ~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsD----r~GRR~ll-l~~~~l~~i~~l~l 394 (523)
.+..|++.++.+ .+|+++ ....++..+..+...+..++.|+++| |+|||+.. +++.+..+++++++
T Consensus 19 ~~~~~~~~f~~~--------~~gl~~-~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 19 LLSSYLLYFYTD--------VLGLSP-ALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHH--------HcCCCH-HHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHh
Confidence 344455555555 345555 55666666778888899999999999 79976654 46767777766666
Q ss_pred HHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 395 VISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPT-KVRGICIAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~-~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
....... ...........+..+++..++.... ....++.+|+.+. +.|....++-..+..+|.++...+.+.+.+..
T Consensus 90 f~~~p~~-~~~~~~~~~~~~~~~l~~~~~t~~~-i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~ 167 (428)
T PF13347_consen 90 FSPPPAG-LSFTAKLVWLFVFYILFDIAYTFVQ-IPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWF 167 (428)
T ss_pred hccccch-hhhhhHHHHHHHHHHHHHHhhhhcc-CchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 5331101 1111111122333333333333333 3334677999884 68999999999999999988888888877654
Q ss_pred C-------chhHHHHHHHHHHHHHHHhheeccC
Q 009862 474 G-------LAGAFGVYAVVCFISWVFVFLRVPE 499 (523)
Q Consensus 474 G-------~~~~f~i~~i~~~i~~v~~~~~lpE 499 (523)
+ |.....+++++.+++.++.++..||
T Consensus 168 g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 168 GGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred ccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 3 6667777778888888888888888
No 203
>PRK11462 putative transporter; Provisional
Probab=98.40 E-value=7.1e-06 Score=88.28 Aligned_cols=169 Identities=15% Similarity=0.091 Sum_probs=105.0
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh----hCChHH-HHHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV----AGRRKL-LLTTIPVLIVSLII 393 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr----~GRR~l-ll~~~~l~~i~~l~ 393 (523)
..+..|+..++.+ .+|++. .....+..+.-+...+.-++.|+++|| +|||+. ++++.+.+++++++
T Consensus 26 ~~~~~~l~~fyt~--------~~Gl~~-~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~l 96 (460)
T PRK11462 26 DNVMLYMMFFYTD--------IFGIPA-GFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVL 96 (460)
T ss_pred HHHHHHHHHHHHH--------hhCCCH-HHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHH
Confidence 4455666666665 356666 566667778888899999999999996 687654 44566666666655
Q ss_pred HHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009862 394 LVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFP-TKVRGICIAICAMAYWICDIIVTYTLPVMLSS 472 (523)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP-~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~ 472 (523)
+...+. .+.........+..+++..++.....|- +++.+|+.+ .+.|++..++-..+..+|.++++.+...+...
T Consensus 97 lf~~p~---~s~~~~~~y~~~~~~~~~~~~t~~~ipy-~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~ 172 (460)
T PRK11462 97 AYSTPD---LSMNGKMIYAAITYTLLTLLYTVVNIPY-CALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNL 172 (460)
T ss_pred HHhCCC---CCcchHHHHHHHHHHHHHHHHHHHhccH-HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443321 1111111122222233333333333332 356678877 68899999999999999988888877666655
Q ss_pred hC-------chhHHHHHHHHHHHHHHHhheeccCC
Q 009862 473 IG-------LAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 473 ~G-------~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
.| |.....+++++.+++.+++++..+|.
T Consensus 173 ~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 173 IGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKER 207 (460)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceec
Confidence 43 44455566666556655555555654
No 204
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.39 E-value=7.2e-06 Score=80.51 Aligned_cols=140 Identities=19% Similarity=0.205 Sum_probs=92.5
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
..|.+..|.|++-+++|+ ++++...+.....++..++ ++.|.+.|++|.+.+++++.+...+....+..
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~----------sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l 85 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGY----------SQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWL 85 (250)
T ss_pred cccchhhhhHHHHHHhCC----------CHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 357889999999888666 3356666677777777765 78899999999999999998888887776655
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhcc-ccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAY-GPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS 472 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~ 472 (523)
...-. .. ..+. +.+.+..+.+..+.++ .......+...||. .||++.|+.-....+++.+...+.-.+...
T Consensus 86 ~~~~~-i~-~~~~--~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 86 AVSGR-IP-SLPV--WLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHhCc-cC-ccch--HHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 43222 11 1112 2222222222222222 22222334578985 799999999999999888877766555443
No 205
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.39 E-value=6e-06 Score=83.67 Aligned_cols=141 Identities=18% Similarity=0.085 Sum_probs=102.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
....+++....+++.+++..+|.++|++|||+.+.+...+.++..++-...+++. .+.++....++..++
T Consensus 113 ~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~----------~L~~f~~l~~~g~gg 182 (528)
T KOG0253|consen 113 GQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFA----------SLCVFRALWGFGVGG 182 (528)
T ss_pred hhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCee----------hhhHHHHHHhccCCC
Confidence 3445566677889999999999999999999999888887777666555444433 233333333333333
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
.|...++-.|..|...|...+=+. ....+|.++...+.-.++.++||++..+...+...+.+++++ .+||.
T Consensus 183 -~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~-w~~ES 253 (528)
T KOG0253|consen 183 -LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLV-WVYES 253 (528)
T ss_pred -ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHh-hcccC
Confidence 566556668999999999887666 777889999998888889999999887777755555555544 48887
No 206
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.39 E-value=1.8e-05 Score=82.80 Aligned_cols=138 Identities=12% Similarity=0.014 Sum_probs=75.0
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
...+..+.+.++++ .+|.+. ....+......++.+++.++.+++.||++|+.... ...+.+..+.+...
T Consensus 223 ~~~~~~~~~~~~~~--------~~g~~~-~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~ 291 (394)
T PRK11652 223 IAVFEACSGVLMGA--------VLGLSS-MTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQS--VICCLLAGLLMWIP 291 (394)
T ss_pred HHHHHHhChHHHHH--------HcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 33444556666665 244444 34444555666777788888888888887433222 22222221111111
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009862 398 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS 472 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~ 472 (523)
.... ....+.......++..+.+ ...+....++.|.+| +.++++.++.+....+|..+++.+.+.+...
T Consensus 292 ~~~~----~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 292 GWFG----VMNVWTLLVPAALFFFGAG-MLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHhc----cccHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 1000 0011122222222222222 234444455678787 5789999999999999999999888876543
No 207
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.38 E-value=8.8e-06 Score=82.55 Aligned_cols=168 Identities=13% Similarity=0.113 Sum_probs=108.3
Q ss_pred HHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh-CChHHHHHHHH
Q 009862 307 VGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA-GRRKLLLTTIP 385 (523)
Q Consensus 307 ~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~-GRR~lll~~~~ 385 (523)
+.+++..|...+|.+..|+|.|+.+.|+ +. ..+.....+..+..++..+....+.+|. .+|+..+....
T Consensus 213 vtLfmGlqS~~~Y~~~~WLP~ili~~G~---------sa-~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~ 282 (395)
T COG2807 213 VTLFMGLQSLLYYIVIGWLPAILIDRGL---------SA-AEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALL 282 (395)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHcCC---------CH-HHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 3344444555689999999999999666 33 6777777788999999999999999975 46777666666
Q ss_pred HHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccC-cchhhHHHHHHHHHHHHHHHHHHH
Q 009862 386 VLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFP-TKVRGICIAICAMAYWICDIIVTY 464 (523)
Q Consensus 386 l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP-~~~Rg~a~gi~~~~~~lG~iig~~ 464 (523)
++.+..+.+.+.+... .+...+..+....+..++...++..-.. ++.-+.-.|+.+.++.+-+.++|.
T Consensus 283 ~~l~G~~G~~~~P~~~-----------~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~ 351 (395)
T COG2807 283 LMLVGLVGLLLAPGQL-----------PILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPW 351 (395)
T ss_pred HHHHHHHHHHHhhhhH-----------HHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhh
Confidence 6666655554433222 1111222222223333443344444333 455567778888888899999999
Q ss_pred HHHHHHHhhCc-hhHHHHHHHHHHHHHHHhhe
Q 009862 465 TLPVMLSSIGL-AGAFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 465 l~~~l~~~~G~-~~~f~i~~i~~~i~~v~~~~ 495 (523)
++|++.|..|. ......++.+.++..++.+.
T Consensus 352 l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 352 LFGFLHDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred hHhHHHHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 99999999874 44444455555555544444
No 208
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.37 E-value=7.1e-06 Score=87.12 Aligned_cols=69 Identities=10% Similarity=-0.081 Sum_probs=48.9
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGR-RKLLLTTIPVLIVSLIILV 395 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GR-R~lll~~~~l~~i~~l~l~ 395 (523)
+.....+++.++.+ ++|++. ....++..+..++.+++.++.|+++||+|| |+++.++.++..++.....
T Consensus 18 ~~~~~~~l~~~l~~--------~~g~s~-~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~ 87 (418)
T TIGR00889 18 WGSWLVTLGSYMSK--------TLHFSG-AEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAA 87 (418)
T ss_pred HHHHHHHHHHHHHH--------hcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 33444566666654 345555 577788889999999999999999999965 7677776666655554444
No 209
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.27 E-value=2.5e-06 Score=92.04 Aligned_cols=132 Identities=15% Similarity=0.079 Sum_probs=91.4
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccch-hhhHHHHHHHHHHH
Q 009862 341 LGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISP-VLKAGISTACVIIY 419 (523)
Q Consensus 341 lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~-~~~~~~~~i~~~~~ 419 (523)
+|+++ ....+...+..++.+++..+.+++.+|++.|+++.++.++.+++.+...+......... ....+......++.
T Consensus 283 lG~s~-~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~ 361 (468)
T TIGR00788 283 LPGGP-SFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIA 361 (468)
T ss_pred CCCCc-chhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHH
Confidence 55666 45556666777999999999999999999999999888877766544321110010000 01111222223333
Q ss_pred HHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009862 420 FCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG 474 (523)
Q Consensus 420 ~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G 474 (523)
..+++..+.+. ..+++++.|++.+++..++.+.+.++|..+++.+++.+.+.+|
T Consensus 362 ~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 362 EVLAQLKFMPF-LVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44444455555 4667899999999999999999999999999999999999887
No 210
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.23 E-value=0.00011 Score=77.70 Aligned_cols=156 Identities=15% Similarity=0.128 Sum_probs=77.7
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
.++.+..+.|.++++. +|++. ....+.......+.+++..+.+++.++..+++.+.....+..++.+++.+
T Consensus 233 ~~~~~~~~~P~~l~~~--------~g~s~-~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~ 303 (413)
T PRK15403 233 PMMSWVAVSPVILIDA--------GGMTT-SQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIV 303 (413)
T ss_pred HHHHHHHhChHHHHHh--------cCCCH-HHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHH
Confidence 3556667789888773 44555 34444555556666776777777654444433332222222222222222
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFP-TKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGL 475 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP-~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~ 475 (523)
..... .. ..+..++..+++..+.+... +..... + +.+ ...+|++.++.+.....+..+++...+++... +.
T Consensus 304 ~~~~~-~~---~~~~~~~~~~l~~~G~~~~~-p~~~~~-a-l~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~ 375 (413)
T PRK15403 304 GNLLW-PH---VWLWSVLGTSLYAFGIGLIF-PTLFRF-T-LFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GG 375 (413)
T ss_pred HHHHc-cc---cHHHHHHHHHHHHHHHHHHh-HHHHHH-H-hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 11001 00 01111222222222222222 222111 1 122 22479999999888888888888888877665 44
Q ss_pred hhHHHHHHHHHHHH
Q 009862 476 AGAFGVYAVVCFIS 489 (523)
Q Consensus 476 ~~~f~i~~i~~~i~ 489 (523)
...|....+++.+.
T Consensus 376 ~~~~~~~~~~~~~~ 389 (413)
T PRK15403 376 RLPFHLLAVVAGVI 389 (413)
T ss_pred chHHHHHHHHHHHH
Confidence 55555555544443
No 211
>PRK09848 glucuronide transporter; Provisional
Probab=98.18 E-value=4.1e-05 Score=81.80 Aligned_cols=128 Identities=13% Similarity=0.049 Sum_probs=67.1
Q ss_pred hhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh----CChHHH-HHHHHHHHHHHHH
Q 009862 319 NGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA----GRRKLL-LTTIPVLIVSLII 393 (523)
Q Consensus 319 ~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~----GRR~ll-l~~~~l~~i~~l~ 393 (523)
..+..|++.|+++ .+|++. .....+..+..+...+..++.|+++||. |||+.+ +++.+...++.++
T Consensus 25 ~~~~~~l~~y~~~--------~~gl~~-~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~ 95 (448)
T PRK09848 25 AMGALFLLSYYTD--------VAGVGA-AAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVL 95 (448)
T ss_pred HHHHHHHHHHHHH--------HcCCCH-HHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHH
Confidence 3444555566665 355655 5677777788999999999999999996 777654 4554444444333
Q ss_pred HHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccC-cchhhHHHHHHHHHHHHH
Q 009862 394 LVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFP-TKVRGICIAICAMAYWIC 458 (523)
Q Consensus 394 l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP-~~~Rg~a~gi~~~~~~lG 458 (523)
+...+. . .......+..+....++..+++....|. .++..++.. .+.|....++-.....++
T Consensus 96 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~al~~~~~~~~~~r~~~~~~r~~~~~~~ 158 (448)
T PRK09848 96 VFWVPT-D-WSHSSKVVYAYLTYMGLGLCYSLVNIPY-GSLATAMTQQPQSRARLGAARGIAASLT 158 (448)
T ss_pred HHhCcC-C-CCcchHHHHHHHHHHHHHHHHHHhcccH-hhhhhhhcCCHHHHHHHHHHHHHHHHHH
Confidence 322110 1 1111111112222223333333332222 234455544 456877666654444443
No 212
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.17 E-value=2.5e-05 Score=81.60 Aligned_cols=218 Identities=13% Similarity=0.078 Sum_probs=112.9
Q ss_pred CCchhHHHhhhhhhhhhhhhhhhcCCCCCCCCCCCccc---ccCcccHHHHhccchhhHHHHHHHHHHHHHhhhhhhhhh
Q 009862 247 EEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSET---ASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLY 323 (523)
Q Consensus 247 ~~~~~~~a~~l~~~~~l~~~~~l~E~~~~~~~~~~~~~---~~~~~~~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~ 323 (523)
+.|.+...+++..++++..+...+|.++....+...+. ....+.|++++.-..-+.+.+..+..+..++. ...+.+
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv-~Gs~sw 265 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFV-IGSLSW 265 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHh-ccccch
Confidence 34455666777777777777777776654322222221 12233455554311002222222222333332 456677
Q ss_pred chHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCCh----HHHHHHHHHH----HHHHHHHH
Q 009862 324 YTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRR----KLLLTTIPVL----IVSLIILV 395 (523)
Q Consensus 324 ~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR----~lll~~~~l~----~i~~l~l~ 395 (523)
|.|.++...- +-.+.+. ....++..++..++.+|.+++|.++||+-|+ ....+..+.+ .++...+.
T Consensus 266 w~p~~~~~~~-----~~~~~~~-~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~ 339 (493)
T KOG1330|consen 266 WAPAFIYYSY-----ELIGFDH-NATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLF 339 (493)
T ss_pred hhhhHHHHHH-----HHhCCcc-ccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHH
Confidence 8887765421 1123333 4566677788899999999999999994321 1111111111 11111111
Q ss_pred HHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhh-
Q 009862 396 ISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWI-CDIIVTYTLPVMLSSI- 473 (523)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~l-G~iig~~l~~~l~~~~- 473 (523)
..... .....+..++++++........+.+.. -+..|+.|++.|.+++++..++..+ |.+-+|++.|.+.+.+
T Consensus 340 ~~~~~----~~~s~~~~~il~~~g~~~~~~~~a~n~-~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~ 414 (493)
T KOG1330|consen 340 LFPAF----TSSSMIFGLILFLVGETISWFNWATNN-PIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLR 414 (493)
T ss_pred HHHhh----hhHHHHHHHHHHHHHHHHHhccccccc-ceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhh
Confidence 11111 111111222222222223333444444 3448999999999999998666654 5556666889888765
Q ss_pred Cch
Q 009862 474 GLA 476 (523)
Q Consensus 474 G~~ 476 (523)
|+.
T Consensus 415 g~~ 417 (493)
T KOG1330|consen 415 GYK 417 (493)
T ss_pred CCC
Confidence 444
No 213
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.16 E-value=0.00014 Score=74.28 Aligned_cols=146 Identities=13% Similarity=0.057 Sum_probs=85.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
.+...+.....+...+...+.|.++||+|||+.-++.+++.+++++.... +++. .+++-.++.+.....
T Consensus 69 ~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~-~~~~----------~L~~GRvlgGiaTSL 137 (354)
T PF05631_consen 69 HQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS-SNYP----------VLLLGRVLGGIATSL 137 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc-cccH----------HHHHHHHHHHHHHHH
Confidence 34444444566677778888999999999999888877777777664322 2222 333333333333222
Q ss_pred -cccccceeeecc----cCcchhhHHHHHHH-HHHHHHHHHHHHHHHHHHHhhCc--hhHHHHHHHHHHHHHHHhheecc
Q 009862 427 -YGPIPNILCAEI----FPTKVRGICIAICA-MAYWICDIIVTYTLPVMLSSIGL--AGAFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 427 -~~~i~~~~~aEl----fP~~~Rg~a~gi~~-~~~~lG~iig~~l~~~l~~~~G~--~~~f~i~~i~~~i~~v~~~~~lp 498 (523)
+.+.=.-++.|. +|.+..+...+... ..+.+-++++..+.-.+.+..+. ..+|....++.+++++++....+
T Consensus 138 LfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ 217 (354)
T PF05631_consen 138 LFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWP 217 (354)
T ss_pred HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccc
Confidence 222222233554 55555555555444 23344556666666677776654 55676666666677776666667
Q ss_pred CCCCC
Q 009862 499 ETKGM 503 (523)
Q Consensus 499 Etk~~ 503 (523)
|..+.
T Consensus 218 ENyg~ 222 (354)
T PF05631_consen 218 ENYGD 222 (354)
T ss_pred ccCCC
Confidence 87654
No 214
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.13 E-value=8.9e-05 Score=82.80 Aligned_cols=166 Identities=16% Similarity=0.181 Sum_probs=103.4
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh-hCChHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV-AGRRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr-~GRR~lll~~~~l~~i~~l~l~~ 396 (523)
+|++...+..|+.+ .++++......... .+....-+..+++|+++|+ +||++.++++.++..+..+++.+
T Consensus 3 yYGm~aiLvlYl~~--------~lg~~~~~A~~i~~-~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai 73 (654)
T TIGR00926 3 YYGMRTILVLYFLN--------FLGFSESTSTVLFH-TFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSF 73 (654)
T ss_pred eeecHHHHHHHHHH--------HcCCcHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 45555555555444 25555544444444 4444445667788999996 79999999888887777766654
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTK---VRGICIAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~---~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
..... ...... ....++.+.+..+...++-+...+...+.++.+ .|-....++.++.++|+++++.+.+++....
T Consensus 74 ~a~~~-~~~~~~-~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~ 151 (654)
T TIGR00926 74 GAIPS-SGHPLH-DLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDV 151 (654)
T ss_pred ccCcc-cccchH-HHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 32111 000111 111222233333444445566667778888753 4778888999999999999999999987543
Q ss_pred -------CchhHHHHHHHHHHHHHHHhh
Q 009862 474 -------GLAGAFGVYAVVCFISWVFVF 494 (523)
Q Consensus 474 -------G~~~~f~i~~i~~~i~~v~~~ 494 (523)
+|...|.+.+++++++.++..
T Consensus 152 ~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 152 GCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred cccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 577777777777666655543
No 215
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.03 E-value=7.3e-05 Score=78.91 Aligned_cols=126 Identities=16% Similarity=0.180 Sum_probs=72.9
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhC-ChHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAG-RRKLLLTTIPVLIVSLIILVI 396 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~G-RR~lll~~~~l~~i~~l~l~~ 396 (523)
+.....|.|.++++.|+ +. .+...+.++..+..+++.+++|+++||.+ +|+++.++.++.++.++....
T Consensus 18 ~G~~~p~~~~~L~~~G~---------s~-~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 18 YGAFLPYLPLYLESRGF---------SG-TQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHhCCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 45567788999998665 33 67777788889999999999999999987 456666665655555444433
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHH
Q 009862 397 SETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYT 465 (523)
Q Consensus 397 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l 465 (523)
...+. ..+.+.+++ .++.....|+..+++.+... .++.-+|-.-+.+.+|-+++...
T Consensus 88 ~~~f~---------~~~~~~~l~-~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~ 144 (400)
T PF03825_consen 88 SSSFW---------WLFVIMLLF-SFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALA 144 (400)
T ss_pred hccHH---------HHHHHHHHH-HHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHH
Confidence 22222 222222222 33333334444444333333 23333444445555665555443
No 216
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.01 E-value=0.00011 Score=78.17 Aligned_cols=170 Identities=17% Similarity=0.147 Sum_probs=110.8
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh----hCCh-HHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV----AGRR-KLLLTTIPVLIVSLI 392 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr----~GRR-~lll~~~~l~~i~~l 392 (523)
+..+..|+..++.+ ..|++. ..+..+..+.-+...+.-++.|.++|| +||| +-++++.+..++..+
T Consensus 28 ~~~~~~yLl~fYTd--------v~Gis~-~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~ 98 (467)
T COG2211 28 FGIVVLYLLFFYTD--------VFGLSA-ALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAV 98 (467)
T ss_pred HHHHHHHHHHHHhc--------ccCCcH-HHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHH
Confidence 34556777777776 467767 455556667778888999999999996 6765 455566666666666
Q ss_pred HHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 393 ILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFP-TKVRGICIAICAMAYWICDIIVTYTLPVMLS 471 (523)
Q Consensus 393 ~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP-~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~ 471 (523)
++...+... .........+...++..++.....|-. ++.+|+.+ ++.|.+..++-..+..+|.++...+.+.+..
T Consensus 99 l~F~~p~~~---~~~k~~ya~vtY~l~~l~YT~vniPy~-al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~ 174 (467)
T COG2211 99 LLFITPDFS---MTGKLIYALVTYMLLGLGYTLVNIPYG-ALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVK 174 (467)
T ss_pred HHHcCCCcc---cCcchHHHHHHHHHHHHHHHheeCchh-hcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665544322 112222233333444445554444433 55677765 4789999999999999999999999988887
Q ss_pred hh-------CchhHHHHHHHHHHHHHHHhheeccCC
Q 009862 472 SI-------GLAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 472 ~~-------G~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
.+ |+.....+++++.++..+++++-.+|.
T Consensus 175 ~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER 210 (467)
T COG2211 175 LFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKER 210 (467)
T ss_pred HhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 55 444455566666666666666656554
No 217
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.99 E-value=0.00018 Score=77.84 Aligned_cols=147 Identities=16% Similarity=0.163 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCC-----hHHH--HHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHH
Q 009862 351 LISAFTTFLMLPCIGVAMKLMDVAGR-----RKLL--LTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCF 423 (523)
Q Consensus 351 l~~~i~~l~~lig~~l~g~LsDr~GR-----R~ll--l~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 423 (523)
++.++..+.-++..++..++..+.+| +... .+++++.+++++.+.+..... ..........++...++..+.
T Consensus 316 ~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~-~~~~~~s~~~~i~~~~~~~~g 394 (475)
T TIGR00924 316 WFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFA-DAGGLTSPWFMVLIYLFQTLG 394 (475)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCccCHHHHHHHHHHHHHH
Confidence 44445555555555554443334433 3333 566777776666655432221 111111222334444444555
Q ss_pred hhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhheecc
Q 009862 424 VAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 424 ~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~lp 498 (523)
-....|....++.+..|++.|++.+|+......+|..+++.+........++.+.+....+++++++++.++..|
T Consensus 395 e~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 395 ELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 556667777888999999999999999999999999999888887776667777787777777777666655444
No 218
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.98 E-value=4.7e-05 Score=81.03 Aligned_cols=188 Identities=11% Similarity=0.001 Sum_probs=117.2
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCC-hH
Q 009862 300 KRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGR-RK 378 (523)
Q Consensus 300 ~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GR-R~ 378 (523)
||.+.+..+.+++... .+..+..-.-.|++++ +.+-+. ...+++.+...++.+++.+++|+...|.++ |+
T Consensus 33 wrsi~l~~~~sfl~~v-~~sI~~~s~wpYl~~l-------D~~A~~-~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~ 103 (488)
T KOG2325|consen 33 WRSIYLALLNSFLVAV-QFSIYLTSMWPYLQKL-------DPTATA-TFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKK 103 (488)
T ss_pred hHhHHHHHHHHHHHhh-hheEEEeecchhhhhc-------CCCCCc-chhhHHHHHHHHHHHhcchhhcccccccCCccc
Confidence 4555555555554433 2334444444555552 122222 456677778999999999999999999985 66
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHH
Q 009862 379 LLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWIC 458 (523)
Q Consensus 379 lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG 458 (523)
.+++++++++++.++........ +.+..++++.-+.++++.+...+.-.|++...-.+.|.++++..+...-+|
T Consensus 104 Pli~s~ii~~~g~llY~~l~~~~------~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg 177 (488)
T KOG2325|consen 104 PLIVSFLIAIIGNLLYLALAYVP------NGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLG 177 (488)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcc------cchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHH
Confidence 67778888877777663332222 101223333333344444555566677788777778888888888877888
Q ss_pred HHHHHHHHHHHHHhh--C-----------chhHHHHHHHHHHHHHHHhheeccCCCC
Q 009862 459 DIIVTYTLPVMLSSI--G-----------LAGAFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 459 ~iig~~l~~~l~~~~--G-----------~~~~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
.++||.+.+.+.... | +..+-|+.+++.++..++.+++++|...
T Consensus 178 ~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 178 IILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 888887766654311 1 2335567777777777777777777533
No 219
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.94 E-value=5.9e-05 Score=79.13 Aligned_cols=160 Identities=18% Similarity=0.099 Sum_probs=87.2
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH--
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILV-- 395 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~-- 395 (523)
+.....+.|.++++ ..|++. .+...+.++..+..++..++.|.++||+|.|+-++..+.+..+....+.
T Consensus 23 ~gi~~pF~~iWL~~--------~~GLs~-~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~ 93 (412)
T PF01306_consen 23 WGIFLPFFPIWLTQ--------VAGLSG-TEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIY 93 (412)
T ss_dssp HHHHHHHHHHHHHH--------HH---H-HHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHcc--------ccCCCH-HHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 45566777888876 244455 5667777788899999999999999999966555444333222211111
Q ss_pred -HHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCc---chhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 396 -ISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPT---KVRGICIAICAMAYWICDIIVTYTLPVMLS 471 (523)
Q Consensus 396 -~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~---~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~ 471 (523)
+.+... .+ ..+..++....++..+.+...+ .|.+-. +..+.-+|=.-+.+.+|-+++..+.|.+.+
T Consensus 94 v~~pll~-----~n---~~lg~iig~i~l~~~f~~~~~~--~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~ 163 (412)
T PF01306_consen 94 VFGPLLQ-----SN---FWLGAIIGGIYLGLVFNAGVPL--SEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFN 163 (412)
T ss_dssp THHHHHH-----TT----HHHHHHTTTTTTTTTTTHHHH--HHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-----HH---HHHHHHHHHHHHHHHHcccchH--HHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeee
Confidence 111111 00 1111222222223333333222 243221 234555677778889999999999998887
Q ss_pred hhCchhHHHHHHHHHHHHHHHhheec
Q 009862 472 SIGLAGAFGVYAVVCFISWVFVFLRV 497 (523)
Q Consensus 472 ~~G~~~~f~i~~i~~~i~~v~~~~~l 497 (523)
. +....|++..+..++..++.++..
T Consensus 164 i-~p~~~fwi~s~~~~il~lll~~~~ 188 (412)
T PF01306_consen 164 I-NPNIIFWIASAAAIILLLLLLLLK 188 (412)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHSS-
T ss_pred e-CccHHHHHHHHHHHHHHHHHHHcC
Confidence 4 334566665555555544444433
No 220
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.93 E-value=8.8e-05 Score=77.37 Aligned_cols=154 Identities=14% Similarity=0.118 Sum_probs=97.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhh
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGR-RKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVA 425 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GR-R~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 425 (523)
..+.....+..++++++..+.|.+.||... |.++++......++.+.+....... ...+.+...+...+++..
T Consensus 301 ~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~------~~~viv~~t~~~~g~~~~ 374 (480)
T KOG2563|consen 301 VFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFL------GDSVIVFTTCGLLGFFGT 374 (480)
T ss_pred cccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccC------CceEehhhhHHHHHHhhc
Confidence 466677778888899999999999999875 3344444444333322222111111 111234444555667777
Q ss_pred ccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----chhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 426 AYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG----LAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 426 ~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G----~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
+..|+..-+..|..=+..-++..|+.++.+.+-+++-.++.+...+..+ +...-++....+.+..++..++.|.-+
T Consensus 375 ~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~ 454 (480)
T KOG2563|consen 375 GYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYR 454 (480)
T ss_pred CCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHH
Confidence 8888888888887555556778899999999988888888888887766 333344444445555555555555544
Q ss_pred CCCHH
Q 009862 502 GMPLE 506 (523)
Q Consensus 502 ~~~le 506 (523)
++..|
T Consensus 455 R~~~e 459 (480)
T KOG2563|consen 455 RLRAE 459 (480)
T ss_pred hHhhh
Confidence 44443
No 221
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.89 E-value=0.00041 Score=70.65 Aligned_cols=153 Identities=14% Similarity=0.172 Sum_probs=107.6
Q ss_pred hhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHh
Q 009862 320 GVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISET 399 (523)
Q Consensus 320 ~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~ 399 (523)
.+...++.+-.+ +|++. ..+.+++++..++..+..++..++..|+|-++.+.+++++.++..++=.....
T Consensus 30 svgPLL~~Ir~~---------~gls~-s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~ 99 (395)
T COG2807 30 SVGPLLDEIRQD---------LGLSF-SVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGL 99 (395)
T ss_pred hhhhhHHHHHHH---------hcccH-HHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccH
Confidence 444445555544 55555 67778888888888999999999999999999988887776666554322111
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CchhH
Q 009862 400 LQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI-GLAGA 478 (523)
Q Consensus 400 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~-G~~~~ 478 (523)
+ .++....+.++.....+.+...++-+-||.+ -+..+|++.+...+++.+++.+...+..+. ||+..
T Consensus 100 ----------~-~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~a 167 (395)
T COG2807 100 ----------P-LLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGA 167 (395)
T ss_pred ----------H-HHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHH
Confidence 1 2222222333333333444445667888876 588999999999999999999999998877 79999
Q ss_pred HHHHHHHHHHHHHHhh
Q 009862 479 FGVYAVVCFISWVFVF 494 (523)
Q Consensus 479 f~i~~i~~~i~~v~~~ 494 (523)
..+.+..+++..++.+
T Consensus 168 L~~WAl~allAl~~Wl 183 (395)
T COG2807 168 LGFWALLALLALLIWL 183 (395)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9888888877765543
No 222
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.87 E-value=0.00042 Score=74.77 Aligned_cols=148 Identities=17% Similarity=0.145 Sum_probs=93.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHH-HHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhh
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLT-TIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVA 425 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~-~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 425 (523)
+......++..+...+..++.|-++|+-++|+.++. ...++.++.+++.+...-. .+...++.++...++.
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~-------~~~~~~l~iia~v~~~- 141 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQ-------WWLALVLFIIANVGYE- 141 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcch-------HHHHHHHHHHHHHHHH-
Confidence 334556677788888888999999999997766554 4444444555444331111 1122222222222222
Q ss_pred ccccccceeeecccCcchh--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHhh------
Q 009862 426 AYGPIPNILCAEIFPTKVR--------------------------GICIAICAMAYWICDIIVTYTLPVMLSSI------ 473 (523)
Q Consensus 426 ~~~~i~~~~~aElfP~~~R--------------------------g~a~gi~~~~~~lG~iig~~l~~~l~~~~------ 473 (523)
.......++..|+.+.+.+ ++..+.....+.+|+++.-.+.-.+....
T Consensus 142 ~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~ 221 (477)
T PF11700_consen 142 ASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASN 221 (477)
T ss_pred HHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 2334445677888888777 88899988888999888777655544322
Q ss_pred --CchhHHHHHHHHHHHHHHHhheeccCCCC
Q 009862 474 --GLAGAFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 474 --G~~~~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
..+..+.+.++..++..+..++++|+.++
T Consensus 222 ~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 222 TWAIRVAFLIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 23556777777777777777888888754
No 223
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.85 E-value=2.7e-05 Score=82.56 Aligned_cols=134 Identities=9% Similarity=0.138 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccc
Q 009862 351 LISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPI 430 (523)
Q Consensus 351 l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i 430 (523)
...++...+.++..++.++|..|+|+-+++..++.+..+=++.+....+.+ ..+.+=++-.......+..+
T Consensus 410 v~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W---------~vLPieilqgit~aliWaa~ 480 (618)
T KOG3762|consen 410 VVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPW---------MVLPIEILQGITHALIWAAI 480 (618)
T ss_pred ehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCch---------heeeHHHHHHHHHHHHHHHH
Confidence 455566677888999999999999999999888877777666555444433 33333333334444444444
Q ss_pred cceeeecccCcchhhHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhh
Q 009862 431 PNILCAEIFPTKVRGICIAICAM-AYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVF 494 (523)
Q Consensus 431 ~~~~~aElfP~~~Rg~a~gi~~~-~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~ 494 (523)
. +|++...|++.|+++.++... ...+|-.+|.++++.+...+|.+..|.++++.|++..++..
T Consensus 481 ~-sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 481 I-SYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred H-HHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 3 777899999999999999854 45688889999999999999999999999888877665543
No 224
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.83 E-value=0.00036 Score=75.76 Aligned_cols=146 Identities=10% Similarity=0.095 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCChHH-------HHHHHHHHHHHHHHHHHHHh-hhccchhhhHHHHHHHHHHHHHH
Q 009862 351 LISAFTTFLMLPCIGVAMKLMDVAGRRKL-------LLTTIPVLIVSLIILVISET-LQLISPVLKAGISTACVIIYFCC 422 (523)
Q Consensus 351 l~~~i~~l~~lig~~l~g~LsDr~GRR~l-------ll~~~~l~~i~~l~l~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ 422 (523)
.+..+..+..++..++.+++.||++||+. +.+++++.+++++.+++... ....+...+.+. ++...++.++
T Consensus 313 ~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~-~i~~~~l~g~ 391 (489)
T PRK10207 313 SFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWF-IVLVYLFQSL 391 (489)
T ss_pred HHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHH-HHHHHHHHHH
Confidence 33445555666778888999999998863 66676666666554432211 110111122222 2333333344
Q ss_pred HhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH------h---h-CchhHHHHHHHHHHHHHHH
Q 009862 423 FVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS------S---I-GLAGAFGVYAVVCFISWVF 492 (523)
Q Consensus 423 ~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~------~---~-G~~~~f~i~~i~~~i~~v~ 492 (523)
......+....++....|.+.++.++|+.++...+|+.++..+...... . . .+.+.|...++++++++++
T Consensus 392 Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~ 471 (489)
T PRK10207 392 GELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVV 471 (489)
T ss_pred HHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4445556656777788999999999999999999999998887765421 0 1 1345566666666666555
Q ss_pred hheec
Q 009862 493 VFLRV 497 (523)
Q Consensus 493 ~~~~l 497 (523)
.++..
T Consensus 472 ~~~~~ 476 (489)
T PRK10207 472 MALMV 476 (489)
T ss_pred HHHHH
Confidence 55433
No 225
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.82 E-value=0.00024 Score=74.20 Aligned_cols=125 Identities=19% Similarity=0.169 Sum_probs=84.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
+.+.+.++++.+.+++..+.+.|+.|++|-|..++++....++...+=.+...-. ........+.... ..........
T Consensus 79 ~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~-v~~~f~~~l~~~G-q~iaa~Aq~F 156 (480)
T KOG2563|consen 79 SAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPF-VPPLFRRPLTHTG-QSIAAAAQPF 156 (480)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCcc-ccccchhhhhHHh-HHHHHHhhhH
Confidence 6778889999999999999999999999999999988888877766543322110 0000000011111 1111222222
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
...++.-+..-+||+++|+++..+..+..-+|..++..+-|.+....
T Consensus 157 im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 157 ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 22333344456799999999999999999999999999888887644
No 226
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.79 E-value=0.00015 Score=78.83 Aligned_cols=146 Identities=8% Similarity=0.053 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh----CChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 351 LISAFTTFLMLPCIGVAMKLMDVA----GRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 351 l~~~i~~l~~lig~~l~g~LsDr~----GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
++..+..+..++..++..++-.|. +.+..+.+++++++++++.+.............+.+ ..+...++.++....
T Consensus 320 ~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~-~~~~~~~l~~~ge~~ 398 (500)
T PRK09584 320 QYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVN-WLIASYGLQSIGELM 398 (500)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHH-HHHHHHHHHHHHHHH
Confidence 344455555555555554444444 444667778888888877766554432111112222 334444444555566
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH----------hhCchhHHHHHHHHHHHHHHHhhee
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS----------SIGLAGAFGVYAVVCFISWVFVFLR 496 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~----------~~G~~~~f~i~~i~~~i~~v~~~~~ 496 (523)
..|+...++.+..|++.||+++|+..+...+|..++..+...... ..++.+.|..+++++++++++.++.
T Consensus 399 ~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~ 478 (500)
T PRK09584 399 ISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLT 478 (500)
T ss_pred HhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 677777788899999999999999777777777777666642210 1124566666666666555544443
Q ss_pred c
Q 009862 497 V 497 (523)
Q Consensus 497 l 497 (523)
.
T Consensus 479 ~ 479 (500)
T PRK09584 479 A 479 (500)
T ss_pred H
Confidence 3
No 227
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.76 E-value=0.0032 Score=65.46 Aligned_cols=165 Identities=14% Similarity=0.088 Sum_probs=104.7
Q ss_pred CcccHHHHhccchhhHHHHHHHHHHHHHhhhhhhhhhchH-HHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHH
Q 009862 287 KGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTP-QILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIG 365 (523)
Q Consensus 287 ~~~~~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~~~p-~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~ 365 (523)
....|+.+...+.-+++++.+++..+. +++. .+++-+|- +-+|++. ..+..++.+...+.+++..
T Consensus 197 f~~a~~~~~~~~~a~~f~~fl~l~t~a---------~~~QD~iLEPygg----~Vfgmsv-~eTT~Lta~~~~G~L~G~~ 262 (403)
T PF03209_consen 197 FREAWRQVWASPQARRFFVFLFLGTLA---------FFMQDVILEPYGG----EVFGMSV-GETTRLTAFWGGGTLLGML 262 (403)
T ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHH---------HHhhHHHcCCchh----HHcCCCH-HHHHHHHHHHHHHHHHHHH
Confidence 334566777666666666665554432 2222 23444432 2477777 5666677788899999999
Q ss_pred HHHHHHH-hhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchh
Q 009862 366 VAMKLMD-VAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVR 444 (523)
Q Consensus 366 l~g~LsD-r~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~R 444 (523)
+.+++.. |.+++++..+++.++++++.++.+..... +.+.....+++++...+...... -..+.++...+..
T Consensus 263 ~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~------~~~~~~~~~~l~G~g~G~f~vga-ls~mM~lt~~~~a 335 (403)
T PF03209_consen 263 LAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLG------SPWLFRPGVFLLGLGNGLFTVGA-LSLMMDLTSAGRA 335 (403)
T ss_pred HHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcc------cchHHHHHHHHHHHhhhHHHHHH-HHHHHhCCCCcch
Confidence 9998877 67788887788888877777665543322 12223333333322222221111 1234677778889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009862 445 GICIAICAMAYWICDIIVTYTLPVMLSS 472 (523)
Q Consensus 445 g~a~gi~~~~~~lG~iig~~l~~~l~~~ 472 (523)
|+.+|.......++..++..+.+.+.|.
T Consensus 336 G~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 336 GLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988763
No 228
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.60 E-value=0.0045 Score=68.18 Aligned_cols=114 Identities=11% Similarity=-0.056 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhcc
Q 009862 349 SFLISAFTTFLMLPCIGVAMKLMDVAGR-RKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAY 427 (523)
Q Consensus 349 ~~l~~~i~~l~~lig~~l~g~LsDr~GR-R~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 427 (523)
..+.+....++..++.++.+.+..+++| |..++++.+++.+++-+++... ..... . .+. +.++.+++....
T Consensus 351 ~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~----~~n~~-~--~i~-~~~l~g~giG~~ 422 (599)
T PF06609_consen 351 IGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVR----PDNKN-A--AIA-FLVLAGFGIGGI 422 (599)
T ss_pred eehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHcc----CCCcc-h--HHH-HHHHHHHhHHHH
Confidence 3455566777778888889999998887 4455566555554444433221 11111 1 112 222222222222
Q ss_pred ccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 428 GPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVML 470 (523)
Q Consensus 428 ~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~ 470 (523)
.....+.+.-..|++.-+++.|+...+..+|+.++..+...+.
T Consensus 423 ~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 423 LVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred HHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 2233345566789999999999999999999988887765443
No 229
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.59 E-value=0.00023 Score=73.22 Aligned_cols=141 Identities=15% Similarity=0.018 Sum_probs=93.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhC--ChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhh
Q 009862 348 ASFLISAFTTFLMLPCIGVAMKLMDVAG--RRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVA 425 (523)
Q Consensus 348 ~~~l~~~i~~l~~lig~~l~g~LsDr~G--RR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 425 (523)
...+......+..+++..+.|.++||++ |-...+.++++.++++....++..+ ...|+....+.+.......
T Consensus 307 ~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~------~~L~vp~~~l~~~i~~~da 380 (464)
T KOG3764|consen 307 EVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSI------AQLWVPNFGLGFGIGLADA 380 (464)
T ss_pred ceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhH------HHHhhhhHHHHHHHHHHHH
Confidence 4444555667888999999999999999 5444444545445444444433322 2333333444444444444
Q ss_pred ccccccceeeecccCcc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhhe
Q 009862 426 AYGPIPNILCAEIFPTK---VRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 426 ~~~~i~~~~~aElfP~~---~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~ 495 (523)
...|...- +.+.--.+ +-|..+++....+.+|.+++|.+.+.+...+|+.|...++++..++.+-++.+
T Consensus 381 sl~P~l~~-lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 381 SLIPTLGY-LVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred HHhhhhHH-hcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 44444422 23332333 67899999999999999999999999999999999988888888777655544
No 230
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.53 E-value=0.00067 Score=54.10 Aligned_cols=62 Identities=24% Similarity=0.299 Sum_probs=50.2
Q ss_pred hhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHH
Q 009862 315 FSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPV 386 (523)
Q Consensus 315 ~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l 386 (523)
+++...+..|.|.++++.|+ +. ....++..+..+..+++.+++|+++||++|++..+....+
T Consensus 13 f~~~g~~~Pfl~~~~~~~Gl---------~~-~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 13 FAALGCLYPFLPLYLKQLGL---------SP-SQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHhhhhHhhhhcCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 44566788899999998666 33 6778888899999999999999999999998877655443
No 231
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.41 E-value=0.0059 Score=68.47 Aligned_cols=70 Identities=19% Similarity=0.183 Sum_probs=47.1
Q ss_pred HhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHH-HHHHHHHHHHHHHHhhCC--hHHHHHHHHHHHHH
Q 009862 314 QFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTF-LMLPCIGVAMKLMDVAGR--RKLLLTTIPVLIVS 390 (523)
Q Consensus 314 ~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l-~~lig~~l~g~LsDr~GR--R~lll~~~~l~~i~ 390 (523)
....++++..|+|.++++ .+|++.. .+.++..+..+ +.+++.+++|+++||+++ |+++.+++++..+.
T Consensus 342 ~~~~~~~~~~~lP~yl~~--------~~g~s~~-~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 342 DSLAFNGYITFLPKYLEN--------QYGISSA-EANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLS 412 (633)
T ss_pred HHHHHHHHHHHHHHHHHH--------HcCCcHH-HHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHH
Confidence 334577888999999986 4666664 44444444443 668999999999999984 45555555555554
Q ss_pred HH
Q 009862 391 LI 392 (523)
Q Consensus 391 ~l 392 (523)
++
T Consensus 413 ~~ 414 (633)
T TIGR00805 413 YL 414 (633)
T ss_pred HH
Confidence 33
No 232
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.40 E-value=0.0051 Score=59.70 Aligned_cols=131 Identities=18% Similarity=0.154 Sum_probs=80.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhcc
Q 009862 348 ASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAY 427 (523)
Q Consensus 348 ~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 427 (523)
...+......+...++.++.|+++||+|||+.++.+.....+..+...+... .....++......+......
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~~~~ 111 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN--------VGLALLLILRLLQGLGGGGL 111 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc--------chHHHHHHHHHHHHhhhHHH
Confidence 3455666777777788899999999999997777766543333222222111 11112222222233333345
Q ss_pred ccccceeeecccCc-chhhHHHHHHHH-HHHHHHHHHHHHHHHHHHh--hCchhHHHHHHHHH
Q 009862 428 GPIPNILCAEIFPT-KVRGICIAICAM-AYWICDIIVTYTLPVMLSS--IGLAGAFGVYAVVC 486 (523)
Q Consensus 428 ~~i~~~~~aElfP~-~~Rg~a~gi~~~-~~~lG~iig~~l~~~l~~~--~G~~~~f~i~~i~~ 486 (523)
.+....+..|.+|. ..|+...++... ...++.++++.+.+.+... .+|+..+.+.....
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 112 LPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 56666778899988 678888888877 5777888888666666544 46666444444333
No 233
>PTZ00207 hypothetical protein; Provisional
Probab=97.38 E-value=0.0023 Score=70.66 Aligned_cols=182 Identities=9% Similarity=0.026 Sum_probs=106.6
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhc-CchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCCh--
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQA-GVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRR-- 377 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~-G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR-- 377 (523)
..+++.++..++...++ ..+...+-+|.+.+ |.+ .+.+....+.++.++++.+|.+..|++....-||
T Consensus 353 ~d~Wll~~~~~cg~g~g-l~~~~N~~qI~~sl~g~~--------~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~ 423 (591)
T PTZ00207 353 ARLWCLLWSIFCCVGAH-FVIIFNARFIYTALAGEA--------PDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRA 423 (591)
T ss_pred hhHHHHHHHHHHhhCch-heeeecHHHHHHHhcCCC--------CCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhcc
Confidence 44555555555444443 45667778888775 331 1111122255677888888888888777322222
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHH
Q 009862 378 ------KLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAIC 451 (523)
Q Consensus 378 ------~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~ 451 (523)
++.+....++.+..+++++.... ....+..++.+.+++..+.... ..++|+|. +.-|+-+-++
T Consensus 424 ~~r~prt~~l~~~~~~~~~~lll~~~~p~---------~~L~~~~~lvg~~~G~~~~~~~-~i~selFg-k~~g~~yN~~ 492 (591)
T PTZ00207 424 EDRVPITIALFIPSVCIITMLTLFLTLPK---------AALPLPYFIAAFANGFMAATIA-LVTRTIFA-KDPAKHYNFC 492 (591)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHCCc---------cHhHHHHHHHHHHhhHhHHHHH-HHHHHHhc-cchHHHhhHH
Confidence 22222222233333333322110 1233444444445555544444 55799999 8889988888
Q ss_pred HHHHHHHHHHH-HHHHHHHHHhh-------------CchhHHHHHHHHHHHHHHHhheeccCCCC
Q 009862 452 AMAYWICDIIV-TYTLPVMLSSI-------------GLAGAFGVYAVVCFISWVFVFLRVPETKG 502 (523)
Q Consensus 452 ~~~~~lG~iig-~~l~~~l~~~~-------------G~~~~f~i~~i~~~i~~v~~~~~lpEtk~ 502 (523)
....-+|+++. ..+.|.+.|.- +++.+|++++++|++..+......-+|+.
T Consensus 493 ~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~ 557 (591)
T PTZ00207 493 FLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYRR 557 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehHH
Confidence 88888888777 56777776532 46678999999998888877666556653
No 234
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.30 E-value=0.003 Score=65.68 Aligned_cols=137 Identities=17% Similarity=0.076 Sum_probs=79.4
Q ss_pred ccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhC-----ChHHHHHH-HHHHHHHHHHHHHHHhhhcc---chhhhHH
Q 009862 340 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAG-----RRKLLLTT-IPVLIVSLIILVISETLQLI---SPVLKAG 410 (523)
Q Consensus 340 ~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~G-----RR~lll~~-~~l~~i~~l~l~~~~~~~~~---~~~~~~~ 410 (523)
+++++. ........+..+. .+..+.+|+.+|+.+ ||..+++. .++++....+..+....... ....+.+
T Consensus 9 EL~vpA-~lv~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~ 86 (403)
T PF03209_consen 9 ELGVPA-WLVALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW 86 (403)
T ss_pred HhccHH-HHHHHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence 445544 3333333344333 467889999999998 88777654 33333333333222211101 1111222
Q ss_pred HHHHHHHHHHHHHh---hccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhH
Q 009862 411 ISTACVIIYFCCFV---AAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGA 478 (523)
Q Consensus 411 ~~~i~~~~~~~~~~---~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~ 478 (523)
.......+.+..++ ........++++|..|++.|+++.++.....-+|.+++..+.+.+++.+.....
T Consensus 87 ~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL 157 (403)
T PF03209_consen 87 LGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERL 157 (403)
T ss_pred HHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHH
Confidence 22222222222222 222334456779999999999999999999899999999999999887754433
No 235
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.28 E-value=0.0025 Score=68.01 Aligned_cols=152 Identities=16% Similarity=0.169 Sum_probs=92.5
Q ss_pred ccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh-----CChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHH
Q 009862 340 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA-----GRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTA 414 (523)
Q Consensus 340 ~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~-----GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i 414 (523)
++|+++. ....+..+..+-. ..-++.|.++|-+ .||+-++++.++.+++.+.++..+... .......+
T Consensus 19 ~l~ls~~-~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~-----~s~~~~~~ 91 (433)
T PF03092_consen 19 DLGLSPA-QLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASE-----SSAAIAVV 91 (433)
T ss_pred HcCCCHH-HHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccccc-----chhhhHHH
Confidence 4566664 3333333443333 4567889999975 356666667766655555554433211 11111122
Q ss_pred HHHHHHHHHhhccccccceeeeccc---CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHH
Q 009862 415 CVIIYFCCFVAAYGPIPNILCAEIF---PTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWV 491 (523)
Q Consensus 415 ~~~~~~~~~~~~~~~i~~~~~aElf---P~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v 491 (523)
++++. .+.......+.-++++|.. |.+ |+.-.+++..+..+|++++..+.|.+.+..+.+..|.+.+++..+..+
T Consensus 92 ~l~la-~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~ 169 (433)
T PF03092_consen 92 LLFLA-SFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLI 169 (433)
T ss_pred HHHHH-HHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHH
Confidence 22222 2222222333334445653 545 888889999999999999999999999999998899888888777776
Q ss_pred HhheeccCC
Q 009862 492 FVFLRVPET 500 (523)
Q Consensus 492 ~~~~~lpEt 500 (523)
..++..+|.
T Consensus 170 ~~~~~~~e~ 178 (433)
T PF03092_consen 170 VALFLLEER 178 (433)
T ss_pred HHHHhhhhc
Confidence 666666763
No 236
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.27 E-value=0.0067 Score=55.25 Aligned_cols=143 Identities=7% Similarity=-0.028 Sum_probs=84.8
Q ss_pred HHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHH
Q 009862 311 ILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVS 390 (523)
Q Consensus 311 ~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~ 390 (523)
++..++++.........+++..+-. ..-+++. ........+......++.+++..+.+++|.|+.++++.+...+.
T Consensus 5 f~~~Ftaf~t~~~i~~svi~s~~~~---~~~~i~~-~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y 80 (156)
T PF05978_consen 5 FMFLFTAFQTQSFIQESVIHSVHER---NPSSISA-GLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIY 80 (156)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHhhc---Ccccccc-cccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3444445556556666666554210 0011222 23444555666677788888999999999999999888777665
Q ss_pred HHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 391 LIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPV 468 (523)
Q Consensus 391 ~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~ 468 (523)
.+....... +..+....+.+.+.+..+. ....++.+....+.|++-.++.-.+...+.++|..+.-.
T Consensus 81 ~~~~~~~~~----------~~l~~~s~l~G~~~a~lW~-aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 81 IASFFYPNS----------YTLYPASALLGFGAALLWT-AQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred HHHHHhhhH----------HHHHHHHHHHhhhhHHhhH-hhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 544332211 1223333333333333333 333566787888889999998877777777777665433
No 237
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.19 E-value=0.0082 Score=66.98 Aligned_cols=81 Identities=19% Similarity=0.183 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhC--ChHH
Q 009862 302 ALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAG--RRKL 379 (523)
Q Consensus 302 ~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~G--RR~l 379 (523)
.+++.+++........+.++..|+|.|+++ ++|.++.....++..+...+..+|.+++|+++.|+- -|..
T Consensus 392 ~if~~~~l~~~~~~~~~~G~~tFlPKyLE~--------Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~ 463 (735)
T KOG3626|consen 392 PIFMLVVLASVIESLAITGYITFLPKYLET--------QFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGA 463 (735)
T ss_pred chHHHHHHHHHHHHHHHhhHHHhhHHHHHH--------HcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHH
Confidence 445555555555566688999999999988 678888666666666666778899999999999874 3444
Q ss_pred HHHHHHHHHHH
Q 009862 380 LLTTIPVLIVS 390 (523)
Q Consensus 380 ll~~~~l~~i~ 390 (523)
..+.++...++
T Consensus 464 a~~~~~~~~l~ 474 (735)
T KOG3626|consen 464 AKFVIVCSVLS 474 (735)
T ss_pred HHHHHHHHHHH
Confidence 44444433333
No 238
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.04 E-value=0.016 Score=62.31 Aligned_cols=203 Identities=12% Similarity=0.137 Sum_probs=114.5
Q ss_pred hhHHHhhhhhhhhhhhhhhhcCCCCCCCCCC---------CcccccCcccHHHHhccchhhHHHHHHHHHHHHHhhhhhh
Q 009862 250 EYIQAAALVSQPALYSKELMDQHPVGPAMVH---------PSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGING 320 (523)
Q Consensus 250 ~~~~a~~l~~~~~l~~~~~l~E~~~~~~~~~---------~~~~~~~~~~~~~L~~~~~~~~~li~~~l~~~~~~~g~~~ 320 (523)
.+..+.+......+|.+..++|+...++... ..........++.+.+.+..|..+..++..++....-...
T Consensus 180 ~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~ 259 (463)
T KOG2816|consen 180 VFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGG 259 (463)
T ss_pred HHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcC
Confidence 4456666666667777778888754333220 0000011112333444333444444344333322211111
Q ss_pred hhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHH-HHHHhhCChHHHHHHHHHHHHHHHHHHHHHh
Q 009862 321 VLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAM-KLMDVAGRRKLLLTTIPVLIVSLIILVISET 399 (523)
Q Consensus 321 i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g-~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~ 399 (523)
..-..+.++. ..++.+....+.+.. .......++.++.. .+...+|-|++...++..-.+..+.+++...
T Consensus 260 ~~~~~~~yl~--------~~f~w~~~~~s~~~~-~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~ 330 (463)
T KOG2816|consen 260 ASDVLLLYLK--------AKFGWNKKEFSDLLS-LVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATE 330 (463)
T ss_pred ceeEEEEEEe--------eecCcCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhcc
Confidence 1101122222 245666644444444 44555556665555 7888899888877887777777777776554
Q ss_pred hhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009862 400 LQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS 472 (523)
Q Consensus 400 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~ 472 (523)
.+ .........++.....+...++++-+...+.+|++.++...+..+..+++|.+.+.+...
T Consensus 331 ~w-----------~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 331 TW-----------MMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred ch-----------hhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 44 122222223334444555556667788899999999999999999999999998887643
No 239
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.96 E-value=0.025 Score=61.35 Aligned_cols=119 Identities=10% Similarity=0.051 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCC--hH-----HHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHH
Q 009862 350 FLISAFTTFLMLPCIGVAMKLMDVAGR--RK-----LLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCC 422 (523)
Q Consensus 350 ~l~~~i~~l~~lig~~l~g~LsDr~GR--R~-----lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 422 (523)
.+..++..+.-++..++.+++=.|..| |. =+.+++++++++.+++.+.......+...+. .+++...++...
T Consensus 311 ~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~-~wl~~~~~~~t~ 389 (493)
T PRK15462 311 AMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSL-PLMVLGLAVMGF 389 (493)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCH-HHHHHHHHHHHH
Confidence 344556666666777777767666633 21 1556777777777666554433211121222 234444444556
Q ss_pred HhhccccccceeeecccCcchhhHHHHHHHHHH-HHHHHHHHHHHHHH
Q 009862 423 FVAAYGPIPNILCAEIFPTKVRGICIAICAMAY-WICDIIVTYTLPVM 469 (523)
Q Consensus 423 ~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~-~lG~iig~~l~~~l 469 (523)
.-.+..|+..++++++.|++.|+..+|+..... .+|..++..+....
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 667788999899999999999999999975532 45555555544433
No 240
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.95 E-value=0.034 Score=59.82 Aligned_cols=111 Identities=11% Similarity=0.029 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhh--ccchh--h------------------hHHHHHHHHH
Q 009862 360 MLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQ--LISPV--L------------------KAGISTACVI 417 (523)
Q Consensus 360 ~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~--~~~~~--~------------------~~~~~~i~~~ 417 (523)
.++..++.+++++|++|++++-+......+..+++++..... ..++. . ..|. ..++.
T Consensus 57 ~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~-~~~FY 135 (472)
T TIGR00769 57 AVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWS-FALFY 135 (472)
T ss_pred HHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhh-HHHHH
Confidence 334478889999999999988877766666655555442211 00000 0 0111 11112
Q ss_pred HHHHHHhhccc-cccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 418 IYFCCFVAAYG-PIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS 471 (523)
Q Consensus 418 ~~~~~~~~~~~-~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~ 471 (523)
+..-.++.... -+.|.+++|++..++-.+-+++...+.++|.++++.+..++..
T Consensus 136 v~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 136 VMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222333333 3778899999999999999999999999999999998888763
No 241
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.87 E-value=0.059 Score=56.66 Aligned_cols=180 Identities=11% Similarity=0.062 Sum_probs=100.7
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHH
Q 009862 300 KRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKL 379 (523)
Q Consensus 300 ~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~l 379 (523)
++.+++.++..++..+ -..-.|+..|+..- ..|++..+...-+.-+..=..++..++...+.|.++.|++
T Consensus 4 ~~~~~llc~~gf~~~f---rPsEPfl~~yL~~~-------~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpv 73 (412)
T PF01770_consen 4 KKITLLLCLFGFFKEF---RPSEPFLTPYLTGP-------DKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPV 73 (412)
T ss_pred hHHHHHHHHHHHHHhc---CCCCccchHHHcCC-------ccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 3555556666665544 34455666666541 2455554444334334444556667777889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHH
Q 009862 380 LLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICD 459 (523)
Q Consensus 380 ll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~ 459 (523)
++++.+...+..+++.+..... ...+.-++++..... -...++++=-..|++.--++.+.+....-+|.
T Consensus 74 iil~~~~~i~t~~lll~~~sv~---------~mq~~q~~yg~~~a~--evay~sYiys~v~~~~yq~vts~~raa~l~g~ 142 (412)
T PF01770_consen 74 IILQALSYIITWLLLLFGTSVL---------AMQLMQFFYGLATAA--EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGR 142 (412)
T ss_pred HHHHHHHHHHHHHHHHHHCcHH---------HHHHHHHHHHHHHHH--HHHHHHHheeecCHHHHHHHHHHHHHHHHHHH
Confidence 9998887777777666544333 122222222222222 12222333334566666677888888888888
Q ss_pred HHHHHHHHHHHHhhCchhHHH-HHHHHHHHHHHHhheeccCC
Q 009862 460 IIVTYTLPVMLSSIGLAGAFG-VYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 460 iig~~l~~~l~~~~G~~~~f~-i~~i~~~i~~v~~~~~lpEt 500 (523)
+++..++..+...-+...... .....+...+++..+++|..
T Consensus 143 ~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 143 FISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 888888777766433222222 22333333444444456654
No 242
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.69 E-value=0.0012 Score=69.26 Aligned_cols=155 Identities=16% Similarity=0.098 Sum_probs=94.0
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh----hCC
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV----AGR 376 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr----~GR 376 (523)
+.++....+.+..+++ +..-..|.|.|+.++|++ . .....+-.+.-+..++..++.|..+|| +||
T Consensus 32 ~~li~v~~ia~Gvqf~-wA~elsy~tPyl~~lGvp---------h-k~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GR 100 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFG-WALELSYLTPYLQSLGVP---------H-KWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGR 100 (498)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhccccHHHHHcCCC---------c-ccccccccccccccceeccccccccccccccccc
Confidence 5566666666777774 566678888898887762 2 333344445556777888999999995 898
Q ss_pred hHHHHHHH-HHHHHHHHHHHHHHhhhc-cchh--h-----hHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhH-
Q 009862 377 RKLLLTTI-PVLIVSLIILVISETLQL-ISPV--L-----KAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI- 446 (523)
Q Consensus 377 R~lll~~~-~l~~i~~l~l~~~~~~~~-~~~~--~-----~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~- 446 (523)
|+.++... +..++.++++.+...+.. .... . ...+.++.+.++=.......+|+= ++.++++....+.+
T Consensus 101 RRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~r-a~L~Dl~~~d~~~~~ 179 (498)
T KOG0637|consen 101 RRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCR-ALLADLARGDAKKTR 179 (498)
T ss_pred ccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHH-HHHHHhccChhhhhc
Confidence 87776554 444555555554443321 1111 1 111122222222233334445553 66788888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 009862 447 CIAICAMAYWICDIIVTYTLP 467 (523)
Q Consensus 447 a~gi~~~~~~lG~iig~~l~~ 467 (523)
+.++...+..+|+.++-.+.+
T Consensus 180 Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 180 ANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred cchhHHHHHHhcceeeeeccc
Confidence 888888888888877665554
No 243
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.63 E-value=0.0041 Score=66.42 Aligned_cols=126 Identities=14% Similarity=0.083 Sum_probs=73.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH-HhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 348 ASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS-ETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 348 ~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
.......+..++.+++..+...+.-+..-|+++.++.++.+++.+.-.+. ...+..-.....+..+.--++........
T Consensus 256 f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~ 335 (433)
T PF03092_consen 256 FYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIA 335 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHH
Confidence 33344456666667777766665555666777666655544433321110 00000000111111122222233333334
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG 474 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G 474 (523)
+.|.. .+++|++|+..-|+.+++...+.++|..++..++..+.+.++
T Consensus 336 ~mP~l-vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 336 FMPSL-VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHH-HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44444 456899999999999999999999999999999999988776
No 244
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.20 E-value=0.0012 Score=72.26 Aligned_cols=165 Identities=16% Similarity=0.139 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhC--ChH
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAG--RRK 378 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~G--RR~ 378 (523)
.++++...+..........++..|+|.|++. ++++++.....+...+...+.++|.+++|+++.|+. .|.
T Consensus 304 Np~f~~~~la~~~~~~~~~G~~tF~pKylE~--------QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~ 375 (539)
T PF03137_consen 304 NPVFMCLILAGVFESFIVSGFATFLPKYLES--------QFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARG 375 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHH
Confidence 3455555555555555678899999999987 678877655555555666678899999999999874 344
Q ss_pred HHHHHHHHHHHHHHH---HHH--HHhhhc------c------ch--------------------------h-hhHHHHHH
Q 009862 379 LLLTTIPVLIVSLII---LVI--SETLQL------I------SP--------------------------V-LKAGISTA 414 (523)
Q Consensus 379 lll~~~~l~~i~~l~---l~~--~~~~~~------~------~~--------------------------~-~~~~~~~i 414 (523)
++..+.+...++.+. +.+ ..+... . .. . ......++
T Consensus 376 ~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl 455 (539)
T PF03137_consen 376 AAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFL 455 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHH
Confidence 444444333333322 111 111000 0 00 0 00111111
Q ss_pred HH-HHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHH-HHHHHHHHHHHHHHHhhC
Q 009862 415 CV-IIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYW-ICDIIVTYTLPVMLSSIG 474 (523)
Q Consensus 415 ~~-~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~-lG~iig~~l~~~l~~~~G 474 (523)
++ ++...+......|.. .+.-...|.+.|+.|+|+..++.+ +|.+-+|+++|.++|...
T Consensus 456 ~~~~~~~~~~~~~~~p~~-~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~tC 516 (539)
T PF03137_consen 456 ILLFILSFFTFMSQVPST-LITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDSTC 516 (539)
T ss_dssp --------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcccchh-eeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhhh
Confidence 11 122222223333333 233467899999999999887776 477899999999998765
No 245
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.04 E-value=0.0012 Score=72.36 Aligned_cols=130 Identities=12% Similarity=-0.031 Sum_probs=1.1
Q ss_pred ccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhcc---c--h---------
Q 009862 340 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLI---S--P--------- 405 (523)
Q Consensus 340 ~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~---~--~--------- 405 (523)
.+++++ ..+.++.+.+-++.++..++..++..|..|-+.+-++.++++++.+++++....... . .
T Consensus 32 RF~l~S-~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~ 110 (539)
T PF03137_consen 32 RFGLSS-SQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSIS 110 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccc
Confidence 456666 677778888999999999999999988777677778888888887777653322100 0 0
Q ss_pred -----------------------hhhHH---HHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHH
Q 009862 406 -----------------------VLKAG---ISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICD 459 (523)
Q Consensus 406 -----------------------~~~~~---~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~ 459 (523)
..... ..+++..++.++......++..+|+-|..+++.-+.-+|+......+|.
T Consensus 111 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGP 190 (539)
T PF03137_consen 111 SNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGP 190 (539)
T ss_dssp -----------------------------------------SSS------------------------------------
T ss_pred cccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccH
Confidence 00011 1112222233333444566677888999999998899999888888888
Q ss_pred HHHHHHHHHHH
Q 009862 460 IIVTYTLPVML 470 (523)
Q Consensus 460 iig~~l~~~l~ 470 (523)
++|-.+++.++
T Consensus 191 a~Gf~lg~~~L 201 (539)
T PF03137_consen 191 ALGFLLGSFCL 201 (539)
T ss_dssp -----------
T ss_pred HHHHHHHHHHH
Confidence 87777776654
No 246
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.01 E-value=0.29 Score=52.09 Aligned_cols=135 Identities=16% Similarity=-0.004 Sum_probs=83.2
Q ss_pred hhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHh
Q 009862 320 GVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISET 399 (523)
Q Consensus 320 ~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~ 399 (523)
.+...+..|+...|+ ++ ......-.+..+.++.+.++..++.+|+|-.+.-++++....+|+.+......
T Consensus 276 sf~~lmt~yl~~~G~---------s~-~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~ 345 (432)
T PF06963_consen 276 SFGGLMTAYLKSQGY---------SP-SVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFW 345 (432)
T ss_pred cCcHHHHHHHHHCCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHh
Confidence 345556677776555 34 55566667788889999999999999999888877777766655554443222
Q ss_pred hhccch-hhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHH
Q 009862 400 LQLISP-VLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYT 465 (523)
Q Consensus 400 ~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l 465 (523)
.. ..+ .......++..+++.=+.--++.....-++.|..|.+.||+..|+-+...++..++.-.+
T Consensus 346 ~~-~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 346 AP-GSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred cC-CCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 22 111 111111222222222222223333444566899999999999999888888776654433
No 247
>PRK03612 spermidine synthase; Provisional
Probab=95.97 E-value=0.26 Score=53.92 Aligned_cols=50 Identities=14% Similarity=0.283 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCchhHHHHHHHHHHHHHHHhh
Q 009862 445 GICIAICAMAYWICDIIVTYTLPVMLS-SIGLAGAFGVYAVVCFISWVFVF 494 (523)
Q Consensus 445 g~a~gi~~~~~~lG~iig~~l~~~l~~-~~G~~~~f~i~~i~~~i~~v~~~ 494 (523)
+...|-.+.+..+|+++|+.++++++- .+|.....++.+.+.++++++.+
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~ 194 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFL 194 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 556777888899999999999988764 67876666666666555554433
No 248
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=95.94 E-value=0.082 Score=55.33 Aligned_cols=170 Identities=11% Similarity=0.004 Sum_probs=95.6
Q ss_pred hhhhchHHHHHhcCchhhhhc---cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHH-HHHHHHHHHHHHH
Q 009862 320 GVLYYTPQILEQAGVEVLLSN---LGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLT-TIPVLIVSLIILV 395 (523)
Q Consensus 320 ~i~~~~p~il~~~G~~~~~~~---lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~-~~~l~~i~~l~l~ 395 (523)
...++.|.|+++.- .+ ...+.+.......++..+...+-.++.|.++|+.|+|+..+. ...+..++.+.+.
T Consensus 33 vtt~ifply~~~~~-----~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~ 107 (438)
T COG2270 33 VTTFIFPLYFTSVA-----GAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLW 107 (438)
T ss_pred eeeehhHHHHHHHH-----hhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 34555666665521 01 223334445556667777777888889999999997665554 4444444545444
Q ss_pred HHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHH-H----
Q 009862 396 ISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVM-L---- 470 (523)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l-~---- 470 (523)
+.+. . ..+...+++.+.......+......++..++.+++.-++..++....+.+|+.+.-.+.-.. +
T Consensus 108 ~i~~------~-s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~ 180 (438)
T COG2270 108 FIPP------G-SYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQ 180 (438)
T ss_pred HhCC------C-chHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccc
Confidence 4332 1 12223333333333333333445556778888877767777776666777766544432111 1
Q ss_pred -------------HhhCchhHHHHHHHHHHHHHHHhheeccCCC
Q 009862 471 -------------SSIGLAGAFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 471 -------------~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
+....+.++.+.++..++..+-.++.+++..
T Consensus 181 ~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~ 224 (438)
T COG2270 181 TGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAE 224 (438)
T ss_pred cceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccc
Confidence 1123455677777777777777777776654
No 249
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.88 E-value=0.063 Score=43.50 Aligned_cols=73 Identities=15% Similarity=0.134 Sum_probs=58.6
Q ss_pred hhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 009862 318 INGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 397 (523)
Q Consensus 318 ~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~ 397 (523)
-+.+...+|.+.++.++ +. ....++.+.+.+++++|.+...++.++..+++.+..+.++..++++.+.+.
T Consensus 8 RFayTplLP~M~~~~~l---------s~-~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGL---------SL-SQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHHhHhHHHHHhcCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556678888887655 33 678888889999999999999999999888888888888888888877765
Q ss_pred Hhh
Q 009862 398 ETL 400 (523)
Q Consensus 398 ~~~ 400 (523)
...
T Consensus 78 ~~~ 80 (85)
T PF06779_consen 78 HSF 80 (85)
T ss_pred hch
Confidence 543
No 250
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.88 E-value=0.024 Score=58.43 Aligned_cols=123 Identities=16% Similarity=0.095 Sum_probs=68.6
Q ss_pred ccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhC--ChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHH
Q 009862 340 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAG--RRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVI 417 (523)
Q Consensus 340 ~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~G--RR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~ 417 (523)
.+|+++. +...+....++.+.+.........+|.. -+-.+..+..++.-..+.+..... .....+...
T Consensus 291 rfg~ss~-~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~---------~~~l~~~s~ 360 (451)
T KOG2615|consen 291 RFGYSSM-QQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLART---------PVVLYLGST 360 (451)
T ss_pred ccCCChh-hheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcccc---------chhhhHHHH
Confidence 4666664 4444444556666666665555666654 333333333222222222111110 111222223
Q ss_pred HHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 418 IYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 418 ~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
+..++ ++...+....++....|...||+..|+......++-++||.+.|.+..+.
T Consensus 361 l~sf~-~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws 415 (451)
T KOG2615|consen 361 LKSFS-TASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWS 415 (451)
T ss_pred HHHHH-HHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEe
Confidence 33222 22233333456678899999999999999999999999999998877654
No 251
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.81 E-value=0.12 Score=55.16 Aligned_cols=149 Identities=11% Similarity=0.117 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCh---H----HHHHHHHHHHHHHHHHHHHHhhhccc-hhhhHHHHHHHHHHHHH
Q 009862 350 FLISAFTTFLMLPCIGVAMKLMDVAGRR---K----LLLTTIPVLIVSLIILVISETLQLIS-PVLKAGISTACVIIYFC 421 (523)
Q Consensus 350 ~l~~~i~~l~~lig~~l~g~LsDr~GRR---~----lll~~~~l~~i~~l~l~~~~~~~~~~-~~~~~~~~~i~~~~~~~ 421 (523)
.+..++..+.-++..++..++.-+.+++ + -+-++.++++.+.+++....... .+ ....+..+++...++..
T Consensus 327 ~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~-~~~~~~~s~~~lil~y~l~s 405 (498)
T COG3104 327 AWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWF-GGPSGLVSVWWLVLSYVLQS 405 (498)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCcCHHHHHHHHHHHH
Confidence 4556667777777787888888775544 1 23345555555555554432222 11 12122334445555556
Q ss_pred HHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHH------HHHhhCchhHHHHHHHHHHHHHHHhhe
Q 009862 422 CFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPV------MLSSIGLAGAFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 422 ~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~------l~~~~G~~~~f~i~~i~~~i~~v~~~~ 495 (523)
+.-.+..|+...++..+.|++..+..+++..+....|..++..+.+. ..+.......|+.++.+.++..+....
T Consensus 406 ~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~ 485 (498)
T COG3104 406 FGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLL 485 (498)
T ss_pred HHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 66677788888888899999999999999888888888888777773 223334445677777766666666554
Q ss_pred eccC
Q 009862 496 RVPE 499 (523)
Q Consensus 496 ~lpE 499 (523)
..|+
T Consensus 486 ~~~~ 489 (498)
T COG3104 486 LSPK 489 (498)
T ss_pred hhHH
Confidence 4443
No 252
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=95.78 E-value=0.38 Score=53.14 Aligned_cols=188 Identities=13% Similarity=0.045 Sum_probs=105.1
Q ss_pred ccchhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh-h
Q 009862 296 EAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV-A 374 (523)
Q Consensus 296 ~~~~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr-~ 374 (523)
+...|+.....+....+--+ .++++..-+-.|+.. .++.+....+ -.............+++++++|- +
T Consensus 32 ~~g~~~s~~~il~~e~~e~~-a~~g~~~nlv~ylt~--------~~~~~~~~aa-~~v~~f~G~~~~~~l~g~~laD~f~ 101 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERL-AFFGLVSNLVTYLTL--------ELHASGGGAA-NNVNAFGGTQFLLPLLGAFLADSFL 101 (571)
T ss_pred eechhHhHHHHHHHHHHHHH-hHhcchhHHHHHHHH--------HhccchHHHH-HHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 33344444444444444333 344444444444433 2344442223 33334445556777889999996 5
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhhccc-------------hhhhHHH-HHHHHHH-HHHHHhhccccccceeeeccc
Q 009862 375 GRRKLLLTTIPVLIVSLIILVISETLQLIS-------------PVLKAGI-STACVII-YFCCFVAAYGPIPNILCAEIF 439 (523)
Q Consensus 375 GRR~lll~~~~l~~i~~l~l~~~~~~~~~~-------------~~~~~~~-~~i~~~~-~~~~~~~~~~~i~~~~~aElf 439 (523)
||-+++.++.++..+.++++.+........ ....... .++...+ ...+..++.-+....+-+|-|
T Consensus 102 gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQf 181 (571)
T KOG1237|consen 102 GRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQF 181 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhccccc
Confidence 888888888877777665554433322111 1111111 1111122 222234455566666778888
Q ss_pred Cc----ch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHh
Q 009862 440 PT----KV--RGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFV 493 (523)
Q Consensus 440 P~----~~--Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~ 493 (523)
+. .. +..-+.++....++|..++..+..++-+..+|...|.+..++.+++.++.
T Consensus 182 d~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 182 DELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred CccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHH
Confidence 72 22 23666777788888888888888888788899888877776666554443
No 253
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.74 E-value=0.036 Score=57.74 Aligned_cols=118 Identities=13% Similarity=0.153 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcc---hhhHHHHHHHHH
Q 009862 378 KLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTK---VRGICIAICAMA 454 (523)
Q Consensus 378 ~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~---~Rg~a~gi~~~~ 454 (523)
++++++.++.+++.+++.+.................+.+ .+.....++.-|....+.+|.|+.+ .|.+...+..++
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL-~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGL-ALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHH-HHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHH-HHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 345666666666666655443332111111112223323 3344445556666667778988765 577788889999
Q ss_pred HHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhhee
Q 009862 455 YWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLR 496 (523)
Q Consensus 455 ~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~ 496 (523)
.++|++++..+.+++.+..||...|.+..+..+++.+..+..
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 999999999999999999999988888887777766655543
No 254
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.72 E-value=0.18 Score=53.87 Aligned_cols=128 Identities=11% Similarity=0.072 Sum_probs=75.0
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh---hCChHHHHHHHHHHHHHHHHHHHHHhhhc-cch--h-----hhHH
Q 009862 342 GISSESASFLISAFTTFLMLPCIGVAMKLMDV---AGRRKLLLTTIPVLIVSLIILVISETLQL-ISP--V-----LKAG 410 (523)
Q Consensus 342 gls~~~~~~l~~~i~~l~~lig~~l~g~LsDr---~GRR~lll~~~~l~~i~~l~l~~~~~~~~-~~~--~-----~~~~ 410 (523)
+.+......+......++.+++..+.+.+.+| +||++++.++..+-.+.+++..+...... ... . .+..
T Consensus 274 ~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~ 353 (461)
T KOG3098|consen 274 GSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSY 353 (461)
T ss_pred cCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccch
Confidence 33344445555666777788888888888765 78888888877766665555443222110 000 0 0111
Q ss_pred HHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 411 ISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVML 470 (523)
Q Consensus 411 ~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~ 470 (523)
....++.++.++.-.++....+.+++.++ ++.|..+.++.-+-..+++.++-+..+...
T Consensus 354 ~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~~ 412 (461)
T KOG3098|consen 354 YLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYLL 412 (461)
T ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhhH
Confidence 12222223333333455556667778888 567888888887777777777666655543
No 255
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=95.35 E-value=0.055 Score=55.05 Aligned_cols=89 Identities=11% Similarity=0.086 Sum_probs=61.6
Q ss_pred HHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------hCchh
Q 009862 414 ACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS----------------IGLAG 477 (523)
Q Consensus 414 i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~----------------~G~~~ 477 (523)
++..++.++......+..+.+++.+.|.+.+++.+++...++.+|.+++|.+.+.++.. ..|+.
T Consensus 14 l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 93 (310)
T TIGR01272 14 LGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHT 93 (310)
T ss_pred HHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHH
Confidence 33333334444445566678889999999999999999999999999999999988732 35666
Q ss_pred HHHHHHHHHHHHHH-HhheeccCCCC
Q 009862 478 AFGVYAVVCFISWV-FVFLRVPETKG 502 (523)
Q Consensus 478 ~f~i~~i~~~i~~v-~~~~~lpEtk~ 502 (523)
++++.+++.++..+ +.++.+||.+.
T Consensus 94 ~yl~ia~~~~~~~i~~~~~~~p~~~~ 119 (310)
T TIGR01272 94 PYLLLAGALAVLAIIFAFLPLPELQE 119 (310)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCCc
Confidence 77756555444443 33445566543
No 256
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.31 E-value=0.11 Score=58.26 Aligned_cols=162 Identities=13% Similarity=0.003 Sum_probs=107.4
Q ss_pred ccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhc-------c------ch-
Q 009862 340 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQL-------I------SP- 405 (523)
Q Consensus 340 ~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~-------~------~~- 405 (523)
.+++++ +.+.++...+-++.++...+..++.-|.-|-+.+-++++++++..+++++...... . ..
T Consensus 126 RF~i~S-s~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~ 204 (735)
T KOG3626|consen 126 RFKISS-SQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPS 204 (735)
T ss_pred hcCCCC-CcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCc
Confidence 466666 45777777888888888888889988888888888888888888887765422110 0 00
Q ss_pred --------------------------h--hhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHH
Q 009862 406 --------------------------V--LKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWI 457 (523)
Q Consensus 406 --------------------------~--~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~l 457 (523)
. ...++.+++..++.++......++...|+-|....+.-..-+|+...+.-+
T Consensus 205 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~l 284 (735)
T KOG3626|consen 205 SSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAIL 284 (735)
T ss_pred cccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHh
Confidence 0 012333444444455555566677778888888888888889998888888
Q ss_pred HHHHHHHHHHHHHHhh------------------C-chhHHHHHHHHHHHHHHHhheeccCCCCC
Q 009862 458 CDIIVTYTLPVMLSSI------------------G-LAGAFGVYAVVCFISWVFVFLRVPETKGM 503 (523)
Q Consensus 458 G~iig~~l~~~l~~~~------------------G-~~~~f~i~~i~~~i~~v~~~~~lpEtk~~ 503 (523)
|-++|-.+++++...+ | |+..|++.+++.++.++..++ .|++..+
T Consensus 285 GPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~-fPk~lp~ 348 (735)
T KOG3626|consen 285 GPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFF-FPKELPK 348 (735)
T ss_pred hhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHh-CcccCcc
Confidence 8888877777766422 2 444455555665555555544 5665443
No 257
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=94.86 E-value=0.043 Score=58.82 Aligned_cols=60 Identities=8% Similarity=0.141 Sum_probs=47.0
Q ss_pred eeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHH
Q 009862 433 ILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVF 492 (523)
Q Consensus 433 ~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~ 492 (523)
++-+|+..++..+++.++......++..++|.+.-.+....|.++...+.++..++...+
T Consensus 411 tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l 470 (488)
T KOG2325|consen 411 TLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAAL 470 (488)
T ss_pred HHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHH
Confidence 344899999999999999999999999999999888888888877665555544444333
No 258
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.75 E-value=1.9 Score=46.82 Aligned_cols=113 Identities=11% Similarity=-0.013 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH--hhhccchhh--------------------hHHHHHHHH
Q 009862 359 LMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISE--TLQLISPVL--------------------KAGISTACV 416 (523)
Q Consensus 359 ~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~--~~~~~~~~~--------------------~~~~~~i~~ 416 (523)
..++...+-.+++++++|.+++-+.......+.+++++.. +-...+... ..|...++.
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 4455666778999999999988776666655555544432 211111110 001111111
Q ss_pred HHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 417 IIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS 471 (523)
Q Consensus 417 ~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~ 471 (523)
+..-........-+.|.+++|++..+.-.+-+++...+.++|.++++.+..++..
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111222333568899999999999999999999999999999999888877
No 259
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.69 E-value=0.34 Score=50.12 Aligned_cols=81 Identities=20% Similarity=0.253 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHH--HHHHHHHHHHH-----
Q 009862 300 KRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLML--PCIGVAMKLMD----- 372 (523)
Q Consensus 300 ~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~l--ig~~l~g~LsD----- 372 (523)
++.+.+..++...+.. - +++..-.|.+++.-|.+ - .... ++.++.- ---+++..++|
T Consensus 30 ~~~illLl~LYllQGi-P-~GL~~~iP~lL~ak~vS---------y-t~~a----~fS~ay~P~sLKllWaPiVDs~y~k 93 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGI-P-LGLIGAIPLLLQAKGVS---------Y-TSQA----IFSFAYWPFSLKLLWAPIVDSVYSK 93 (510)
T ss_pred hhhHHHHHHHHHHcCC-c-hhHhhhhHHHhcCCCcc---------h-hhhh----hhhhhhhHHHHHHHHHhhhHHHHHH
Confidence 4556666666655533 2 35555788888864432 1 1111 2222222 23457778888
Q ss_pred hhCChHHHHHH-HHHHHHHHHHHHH
Q 009862 373 VAGRRKLLLTT-IPVLIVSLIILVI 396 (523)
Q Consensus 373 r~GRR~lll~~-~~l~~i~~l~l~~ 396 (523)
|+|||+..++- ..+.+..+..+..
T Consensus 94 ~~GrrksWvvp~q~llG~~mllLs~ 118 (510)
T KOG3574|consen 94 RFGRRKSWVVPCQYLLGLFMLLLSY 118 (510)
T ss_pred hhccccceeeehHHHHHHHHHHHhh
Confidence 99999876653 3344444444443
No 260
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.47 E-value=0.11 Score=51.06 Aligned_cols=32 Identities=25% Similarity=0.243 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 009862 361 LPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLI 392 (523)
Q Consensus 361 lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l 392 (523)
++...+.|-++|+-|||+.-+.-++..+++++
T Consensus 86 mLFGtivgSLaDkqGRKracvtycitYiLsCi 117 (454)
T KOG4332|consen 86 MLFGTIVGSLADKQGRKRACVTYCITYILSCI 117 (454)
T ss_pred HHHHHHHHHHHhhhccccceeeehHHHHHHHH
Confidence 33445667799999999976655555555544
No 261
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=93.28 E-value=3.4 Score=44.10 Aligned_cols=146 Identities=10% Similarity=-0.052 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHH----HHHHHHHHHhhhccch---hhhHHHHHHHHHHHHHH
Q 009862 350 FLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIV----SLIILVISETLQLISP---VLKAGISTACVIIYFCC 422 (523)
Q Consensus 350 ~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i----~~l~l~~~~~~~~~~~---~~~~~~~~i~~~~~~~~ 422 (523)
........+..++..+..|.++||..|.+....+.++.-+ ++.++....... ... .......+++..++++.
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~-~~~~~~~~~~~~l~~~~~~~~~i 119 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYP-SSSSQSSWLFIALFALLILLGAI 119 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-ccccccchHHHHHHHHHHHHHHH
Confidence 3444555667777888889999999998877666554422 222222222111 111 11111122222222221
Q ss_pred Hhhccccccceeeecc----c--CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhhee
Q 009862 423 FVAAYGPIPNILCAEI----F--PTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLR 496 (523)
Q Consensus 423 ~~~~~~~i~~~~~aEl----f--P~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~~ 496 (523)
-..+.....-++--|+ . .+..+....+...-+=-+..+++|.+.+.+.+..+......+.++..++..++=+++
T Consensus 120 ~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~ 199 (432)
T PF06963_consen 120 ERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFL 199 (432)
T ss_pred HHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111111222 2 222233333332222235788999999999998888777777777777766654443
No 262
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.16 E-value=0.016 Score=57.29 Aligned_cols=117 Identities=10% Similarity=0.020 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-hCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccc
Q 009862 350 FLISAFTTFLMLPCIGVAMKLMDV-AGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYG 428 (523)
Q Consensus 350 ~l~~~i~~l~~lig~~l~g~LsDr-~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 428 (523)
.++.+++..-.++-++++||+.|| +|-|..-++-++...+.-++++ .+...++...+.+-.+..+..+-...
T Consensus 82 tLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa-------~Ggi~~aFw~M~~GRF~FGIGgESlA 154 (459)
T KOG4686|consen 82 TLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFA-------AGGISHAFWTMLAGRFLFGIGGESLA 154 (459)
T ss_pred eeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHH-------hchHHHHHHHHHhhheeeccCchhhh
Confidence 344557777888889999999996 6766544433333333333332 22223333344444444444444455
Q ss_pred cccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 429 PIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI 473 (523)
Q Consensus 429 ~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~ 473 (523)
...+.++.-.|.-+.-+.++|+.....++|+.+--.+.|++.+..
T Consensus 155 VaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 155 VAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred hhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 566778888899999999999999999999998888888887755
No 263
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=92.74 E-value=0.1 Score=56.22 Aligned_cols=70 Identities=13% Similarity=0.146 Sum_probs=49.0
Q ss_pred hhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHH-HHHHHHHHHHHH
Q 009862 317 GINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTT-IPVLIVSLIILV 395 (523)
Q Consensus 317 g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~-~~l~~i~~l~l~ 395 (523)
+...+...++.|++++|+ ++ .....+....-+..+++.+++|+++||+-+|+.++++ .+....+.+++.
T Consensus 26 ~~g~l~pll~vy~kQLGl---------~p-~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~ 95 (618)
T KOG3762|consen 26 RFGSLFPLLAVYFKQLGL---------NP-AVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLV 95 (618)
T ss_pred cccccchHHHHHHHHcCC---------CH-HHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhee
Confidence 456777888899988655 44 4555666677788999999999999999866555544 444444444444
Q ss_pred H
Q 009862 396 I 396 (523)
Q Consensus 396 ~ 396 (523)
+
T Consensus 96 f 96 (618)
T KOG3762|consen 96 F 96 (618)
T ss_pred e
Confidence 3
No 264
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.64 E-value=2.1 Score=45.97 Aligned_cols=112 Identities=9% Similarity=-0.093 Sum_probs=80.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhc
Q 009862 347 SASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA 426 (523)
Q Consensus 347 ~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 426 (523)
...+....+......+++++++.+.|++|.|..|+++.....+..+.+...+.+. .++.-.+.+.+.+..
T Consensus 50 ~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~----------~yfssallG~Gaall 119 (461)
T KOG3098|consen 50 YAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYY----------LYFSSALLGFGAALL 119 (461)
T ss_pred CccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHH----------HHHHHHHhhhhHHhe
Confidence 3455557778888899999999999999999999999888877776665544332 333334444444433
Q ss_pred cccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 427 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVM 469 (523)
Q Consensus 427 ~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l 469 (523)
+..- ..+.+|....+.+.+.+++.-.++..+.++|..+.-.+
T Consensus 120 w~Gq-G~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 120 WTGQ-GGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred eccc-ceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 3333 36778999999999999998888888888776655443
No 265
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=92.10 E-value=4.9 Score=43.14 Aligned_cols=113 Identities=7% Similarity=-0.063 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhh----ccc---------hhh----------hHHHHHHH
Q 009862 359 LMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQ----LIS---------PVL----------KAGISTAC 415 (523)
Q Consensus 359 ~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~----~~~---------~~~----------~~~~~~i~ 415 (523)
.+++..++-.++.+++-|.+++-+.+..+..+.+++++..... +.+ ... ..|...+.
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 4556667777888888888887766666655555555433211 011 000 01222222
Q ss_pred HHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 416 VIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS 471 (523)
Q Consensus 416 ~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~ 471 (523)
.++.-.-......-+.|..+.|++..++-.+-+++.+...+++.++++.+..++..
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22222222223333567778999999999999999999999999998888887765
No 266
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=90.34 E-value=11 Score=37.15 Aligned_cols=35 Identities=11% Similarity=-0.148 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHH
Q 009862 353 SAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVL 387 (523)
Q Consensus 353 ~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~ 387 (523)
..++.++.++|.+..|.+...-=+|+.++.+.+.+
T Consensus 147 ~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~ 181 (267)
T PF07672_consen 147 QILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISL 181 (267)
T ss_pred HHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHH
Confidence 33444455566666666655333344444433333
No 267
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=89.76 E-value=7.2 Score=41.13 Aligned_cols=56 Identities=11% Similarity=-0.017 Sum_probs=36.3
Q ss_pred HHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 416 VIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS 471 (523)
Q Consensus 416 ~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~ 471 (523)
++++.+..++......+..+.|-.|++.|-.++|...+.-.+|..++..+.-.+-.
T Consensus 341 lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 341 LIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33343433333333333445677899999999999988888888877776554433
No 268
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=89.04 E-value=28 Score=37.87 Aligned_cols=39 Identities=18% Similarity=0.236 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 009862 353 SAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSL 391 (523)
Q Consensus 353 ~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~ 391 (523)
....++..++..++++.+..|+|=+...++.-+++.++.
T Consensus 325 ~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~ 363 (491)
T PF03219_consen 325 SSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITG 363 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHH
Confidence 344455556666788899999998877766544444433
No 269
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=87.36 E-value=22 Score=37.53 Aligned_cols=16 Identities=6% Similarity=-0.193 Sum_probs=10.7
Q ss_pred hhhhhhhchHHHHHhc
Q 009862 317 GINGVLYYTPQILEQA 332 (523)
Q Consensus 317 g~~~i~~~~p~il~~~ 332 (523)
.++.+.+-.+++...+
T Consensus 33 pWN~fiTa~~y~~~~~ 48 (406)
T KOG1479|consen 33 PWNMFITASDYYYYRF 48 (406)
T ss_pred chHhhhccHHHHHhhc
Confidence 4667777777776664
No 270
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=86.57 E-value=3.6 Score=43.37 Aligned_cols=128 Identities=9% Similarity=0.106 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhcccccccee
Q 009862 355 FTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNIL 434 (523)
Q Consensus 355 i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~ 434 (523)
.-.+-.++..+++.++.+|+.-+.-.+++.+++++++++.++..+.. .-++.+.+.. ++.+.+-+...-
T Consensus 67 adi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~---------~~l~Gv~las--~ssg~GE~tfL~ 135 (402)
T PF02487_consen 67 ADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVW---------VRLLGVVLAS--LSSGLGEVTFLS 135 (402)
T ss_pred HHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchh---------HHHHHHHHHh--hhhhhhHHHHHH
Confidence 34455666777788899988644333444445555655555433222 2222222222 222222222121
Q ss_pred eecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc--hhHHHHHHHHHHHHHHHhheecc
Q 009862 435 CAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGL--AGAFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 435 ~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~--~~~f~i~~i~~~i~~v~~~~~lp 498 (523)
....|+.. +++-.......++++|+...-.+.. .|+ +..+.+..++.++..+..++.+|
T Consensus 136 lt~~y~~~----~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~ 196 (402)
T PF02487_consen 136 LTHFYGKS----SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLP 196 (402)
T ss_pred HHHhcCcc----ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 23455542 3344444445566666665544444 554 44566666666555544444454
No 271
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=85.21 E-value=11 Score=40.37 Aligned_cols=117 Identities=8% Similarity=0.001 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCChH-HHHHHHHHHHHHHHHHHHHHhhhccc---hhhhHHHHHHHHHHHHHHH
Q 009862 348 ASFLISAFTTFLMLPCIGVAMKLMDVAGRRK-LLLTTIPVLIVSLIILVISETLQLIS---PVLKAGISTACVIIYFCCF 423 (523)
Q Consensus 348 ~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~-lll~~~~l~~i~~l~l~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~ 423 (523)
.......+++++-++|..+..+.. .-.+|. .+.+..+.=.+...++.++....... ...+.+.. +++.+..+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~-~~~~~l~glt 385 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYF-IILMLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHH-HHHHHHHHHh
Confidence 444566677788888887554331 112231 23333333333333332222110000 11122222 2233333333
Q ss_pred hhccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 009862 424 VAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTL 466 (523)
Q Consensus 424 ~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~ 466 (523)
.+........+..+..+++.|-.+-.+...+..+|-.+|..+.
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4344445555667778888998888888877777777776653
No 272
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=84.08 E-value=6.3 Score=41.64 Aligned_cols=76 Identities=13% Similarity=-0.044 Sum_probs=48.6
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChH
Q 009862 299 VKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRK 378 (523)
Q Consensus 299 ~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ 378 (523)
+..+.++-+.+++....+|++-+..|...+.+....+ +- .....+.+-++..+.+.++.+..|++..++.+..
T Consensus 244 y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~------~~-~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~ 316 (412)
T PF01770_consen 244 YSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPS------DN-ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWG 316 (412)
T ss_pred hcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCC------CC-CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHH
Confidence 4456667777777777888888888988888775110 00 1122334455666777778888888866666644
Q ss_pred HHH
Q 009862 379 LLL 381 (523)
Q Consensus 379 lll 381 (523)
-+.
T Consensus 317 ~l~ 319 (412)
T PF01770_consen 317 ELA 319 (412)
T ss_pred HHH
Confidence 433
No 273
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=82.74 E-value=11 Score=37.60 Aligned_cols=136 Identities=16% Similarity=0.182 Sum_probs=71.6
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCCh--H
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRR--K 378 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR--~ 378 (523)
|..+++.+ +......-+..+..|.|.+-.+ +-+. .. ..+...+.++.++|.-+..++..|-..| +
T Consensus 249 ki~LLG~i-qsLFE~smytFVFLWTPaLspn--------~e~i---Ph-GfiFatFMlASmLGSSla~Rl~s~s~~~ve~ 315 (454)
T KOG4332|consen 249 KIALLGAI-QSLFEGSMYTFVFLWTPALSPN--------DEEI---PH-GFIFATFMLASMLGSSLASRLLSRSSPKVES 315 (454)
T ss_pred HHHHHHHH-HHHHhhhhheeeeeecccCCCC--------cccC---Cc-hhHHHHHHHHHHHhhHHHHHHHhcCCcccch
Confidence 33444443 3333333355667788877422 1111 12 2333345566667777777776664443 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHH
Q 009862 379 LLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICA 452 (523)
Q Consensus 379 lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~ 452 (523)
.+.+.+++.++.+.+..+..... .+ .......++.++++-.+.+..+..+. -+=+...|.+.|++.+-+.-
T Consensus 316 ymqivf~vs~a~l~Lpilt~~vs-P~-kes~~~s~i~F~~~E~cvGlfwPSim-kmRsqyIPEearstimNfFR 386 (454)
T KOG4332|consen 316 YMQIVFLVSIAALLLPILTSSVS-PS-KESPSESLIGFCLFEACVGLFWPSIM-KMRSQYIPEEARSTIMNFFR 386 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC-CC-cCCchHHHHHHHHHHHHHhhcchHHH-HHHHhhCCHHHHhhhhhhee
Confidence 55555555555444433333222 22 22333445666666666665554444 44577889999988877643
No 274
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=81.29 E-value=21 Score=38.24 Aligned_cols=31 Identities=13% Similarity=-0.048 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhCChHHHHHHHH
Q 009862 355 FTTFLMLPCIGVAMKLMDVAGRRKLLLTTIP 385 (523)
Q Consensus 355 i~~l~~lig~~l~g~LsDr~GRR~lll~~~~ 385 (523)
...+..++..++...+..|+..|.-++.+++
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv 83 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLV 83 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHH
Confidence 3444445555555566666665333333433
No 275
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=80.86 E-value=0.5 Score=46.28 Aligned_cols=17 Identities=12% Similarity=0.317 Sum_probs=0.0
Q ss_pred HHHHHHHhheeccCCCC
Q 009862 486 CFISWVFVFLRVPETKG 502 (523)
Q Consensus 486 ~~i~~v~~~~~lpEtk~ 502 (523)
.++.++++++++-+++.
T Consensus 174 ~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 174 LLFLAILIWLYVHDQRH 190 (381)
T ss_dssp -----------------
T ss_pred HHHHHHHHHHHhcCCCC
Confidence 34445556666666654
No 276
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=80.60 E-value=4.2 Score=43.28 Aligned_cols=130 Identities=13% Similarity=0.057 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhc-c------c--hhhhHHHHHHHHHHH
Q 009862 349 SFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQL-I------S--PVLKAGISTACVIIY 419 (523)
Q Consensus 349 ~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~-~------~--~~~~~~~~~i~~~~~ 419 (523)
..+-.+++++...+.+.+.-++++|+|-|+.++.+.....+...+.....+... . + ..........++..+
T Consensus 334 G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y 413 (498)
T KOG0637|consen 334 GCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALY 413 (498)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHH
Confidence 345566777777888888999999999444444333322222222221111110 0 0 000000111111111
Q ss_pred HHH--HhhccccccceeeecccCcc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhH
Q 009862 420 FCC--FVAAYGPIPNILCAEIFPTK--VRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGA 478 (523)
Q Consensus 420 ~~~--~~~~~~~i~~~~~aElfP~~--~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~ 478 (523)
... --+....++++..+...... -+|...|+.+....+..++.....|.+.+..|-...
T Consensus 414 ~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~ 476 (498)
T KOG0637|consen 414 AILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNL 476 (498)
T ss_pred HHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcch
Confidence 111 01112233444433222222 236667777888888888888888888888765443
No 277
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=79.28 E-value=99 Score=33.49 Aligned_cols=37 Identities=16% Similarity=0.182 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHH
Q 009862 353 SAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIV 389 (523)
Q Consensus 353 ~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i 389 (523)
....++..++..++.+++.+|+|=+..+++.-++..+
T Consensus 309 ~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 309 STWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3444555556666778999999988777665555544
No 278
>PRK10263 DNA translocase FtsK; Provisional
Probab=78.65 E-value=25 Score=42.33 Aligned_cols=20 Identities=20% Similarity=0.130 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHhhC
Q 009862 356 TTFLMLPCIGVAMKLMDVAG 375 (523)
Q Consensus 356 ~~l~~lig~~l~g~LsDr~G 375 (523)
.+.++.+|..++..+.--||
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred ccccchHHHHHHHHHHHHHh
Confidence 34555555555555555555
No 279
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=78.22 E-value=2.1 Score=46.21 Aligned_cols=140 Identities=10% Similarity=-0.027 Sum_probs=73.1
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChH
Q 009862 299 VKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRK 378 (523)
Q Consensus 299 ~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ 378 (523)
+..+.++-+.++.....+|++-+..|...+-+....+ .....+..-++..+.+.++.+..|++-.++.|--
T Consensus 259 y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~---------~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~ 329 (511)
T TIGR00806 259 YRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDES---------LNKYNGAVDAASTLLGAITSFIAGFVNIRWARWS 329 (511)
T ss_pred hcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCC---------ccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhH
Confidence 4455666666777777778888888888887764220 0012223444566677788888998855553322
Q ss_pred HHHHH--HHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHHHHHHHHHHH
Q 009862 379 LLLTT--IPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYW 456 (523)
Q Consensus 379 lll~~--~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~ 456 (523)
.+.++ .++.+.+++++... .+.|+..+..+++.+++.........- ++.....+.-|...|+.++..-
T Consensus 330 ~l~l~v~s~~~~gll~~m~~t---------~~Iw~~Y~~yvlf~~~y~flitia~~~-iA~~L~~~~~aLvFGiNtfvAl 399 (511)
T TIGR00806 330 KLLIAVVSAIQAGLVFWMSQS---------HDIWVLYVTYVLFRGIYQFLVPIATFQ-IASSLSKELCALVFGINTFVAT 399 (511)
T ss_pred HHHHHHHHHHHHHHhhhhhcc---------cchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcccceEEEEecHHHHHH
Confidence 23322 22233333333222 233455555555555555443333222 2333344444666666544433
Q ss_pred H
Q 009862 457 I 457 (523)
Q Consensus 457 l 457 (523)
+
T Consensus 400 ~ 400 (511)
T TIGR00806 400 A 400 (511)
T ss_pred H
Confidence 3
No 280
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=76.69 E-value=15 Score=39.82 Aligned_cols=64 Identities=14% Similarity=0.132 Sum_probs=32.8
Q ss_pred cccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----hh--------C---chhHHHHHHHHHHHHHHHhheeccCC
Q 009862 437 EIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS-----SI--------G---LAGAFGVYAVVCFISWVFVFLRVPET 500 (523)
Q Consensus 437 ElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~-----~~--------G---~~~~f~i~~i~~~i~~v~~~~~lpEt 500 (523)
.+..++.++.|..-.....++|.+++-.++-.+-+ .+ | ......+++.+.++..+++.++-+|.
T Consensus 145 T~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~ 224 (544)
T PF13000_consen 145 TMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEK 224 (544)
T ss_pred hhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecc
Confidence 45566666665555444555666555444433321 11 1 22234455566666666666765553
No 281
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=76.09 E-value=65 Score=32.53 Aligned_cols=34 Identities=9% Similarity=0.065 Sum_probs=18.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhH
Q 009862 442 KVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGA 478 (523)
Q Consensus 442 ~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~ 478 (523)
+.|+...-+ ..-.-+-++..+.+.+...++|.+.
T Consensus 154 N~r~a~LHv---l~D~Lgsv~vIia~i~i~~~~w~~~ 187 (296)
T COG1230 154 NMRGAYLHV---LGDALGSVGVIIAAIVIRFTGWSWL 187 (296)
T ss_pred hHHHHHHHH---HHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 456554443 3333344445555666777788774
No 282
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=74.35 E-value=33 Score=37.60 Aligned_cols=25 Identities=12% Similarity=0.017 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCC
Q 009862 352 ISAFTTFLMLPCIGVAMKLMDVAGR 376 (523)
Q Consensus 352 ~~~i~~l~~lig~~l~g~LsDr~GR 376 (523)
...++.+.++++..+++++...+|.
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCC
Confidence 3344555566666666666666664
No 283
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=72.72 E-value=14 Score=38.11 Aligned_cols=123 Identities=11% Similarity=0.093 Sum_probs=70.1
Q ss_pred HHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHh--hccccccceeeecccCcch
Q 009862 366 VAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFV--AAYGPIPNILCAEIFPTKV 443 (523)
Q Consensus 366 l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~i~~~~~aElfP~~~ 443 (523)
..-.+.|...-|++++.-.+...++.+++.+..... .+.++-.+++ ...-...++++=+..+++.
T Consensus 61 pvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~-------------~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~ 127 (433)
T KOG3810|consen 61 PVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVK-------------AMQVLEFFYGPATAAEIAYYSYIYSKVDPEM 127 (433)
T ss_pred HHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCch-------------heeeehhhcChHHHHHHhhhheeeeecCHHH
Confidence 334588988888887766555555555554433322 1111111121 1122233455567788888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchh-HHHHHHHHHHHHHHHhheeccCCC
Q 009862 444 RGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG-AFGVYAVVCFISWVFVFLRVPETK 501 (523)
Q Consensus 444 Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~-~f~i~~i~~~i~~v~~~~~lpEtk 501 (523)
+-++.|.+-...-.|-+++..+...++..-.+.. ..-.....+..++.+..+++|..+
T Consensus 128 Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 128 YKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 9999999888877787777777776665332211 222334444445555556677665
No 284
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=71.68 E-value=15 Score=33.11 Aligned_cols=89 Identities=9% Similarity=0.008 Sum_probs=44.3
Q ss_pred HHHHhhCChHHHHHHHHHHH-HHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhccccccceeeecccCcchhhHH
Q 009862 369 KLMDVAGRRKLLLTTIPVLI-VSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGIC 447 (523)
Q Consensus 369 ~LsDr~GRR~lll~~~~l~~-i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~aElfP~~~Rg~a 447 (523)
.++||+-||..+..++.... ++.+.+.+..... .....+.|+.++..+ ++|+.+...+.|.+.+-...++.-|+.
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~-~~~dvP~~~~~~~S~---~~Fg~gllGisYGilSaSWD~~r~GSl 131 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSR-QIVDVPPWAVLLVSL---VFFGLGLLGISYGILSASWDPEREGSL 131 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhc-cccccCchHHHHHHH---HHHHHHHHhhhhhhcccccCCCCCCCc
Confidence 36788888877666654332 2222221111111 112223333332222 233333333444445555677778999
Q ss_pred HHHHHHHHHHHHHH
Q 009862 448 IAICAMAYWICDII 461 (523)
Q Consensus 448 ~gi~~~~~~lG~ii 461 (523)
.|+-.+--+++-+.
T Consensus 132 lG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 132 LGWEEFKRNWGRMW 145 (153)
T ss_pred ccHHHHHHhHHHHH
Confidence 99987777776544
No 285
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=69.32 E-value=66 Score=33.38 Aligned_cols=42 Identities=12% Similarity=0.228 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHH-HhhCchhHHHHHHHHHHHHHHHhhe
Q 009862 454 AYWICDIIVTYTLPVML-SSIGLAGAFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 454 ~~~lG~iig~~l~~~l~-~~~G~~~~f~i~~i~~~i~~v~~~~ 495 (523)
.-.+|+..+..+.|++. ..+|....-.+.+.+.++++++.+|
T Consensus 147 ~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv~~f 189 (508)
T COG4262 147 LDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVVTLF 189 (508)
T ss_pred hHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 35678888888888764 4566555445555555555544333
No 286
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=68.62 E-value=29 Score=36.50 Aligned_cols=43 Identities=7% Similarity=-0.028 Sum_probs=35.7
Q ss_pred ceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009862 432 NILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG 474 (523)
Q Consensus 432 ~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G 474 (523)
.+..+.+.++.+-|+-|.+.|...++|+-.-..+...+.+.++
T Consensus 391 maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 391 MAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 3567899999999999999999999998877777777776553
No 287
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=67.87 E-value=1.6e+02 Score=31.94 Aligned_cols=39 Identities=15% Similarity=0.184 Sum_probs=24.6
Q ss_pred HHHHH-HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 009862 355 FTTFL-MLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLII 393 (523)
Q Consensus 355 i~~l~-~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~ 393 (523)
+.++. .++...+++-++.|.|=....++.-+++.+..++
T Consensus 329 ~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~l 368 (509)
T COG3202 329 WTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVL 368 (509)
T ss_pred HHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 33444 4556667788888888877766665555555433
No 288
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=61.63 E-value=19 Score=37.20 Aligned_cols=72 Identities=15% Similarity=-0.021 Sum_probs=45.7
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChH
Q 009862 299 VKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRK 378 (523)
Q Consensus 299 ~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~ 378 (523)
++.+.++-+-++.....+|++-+.+|...+-+.... -+.....+..=++..+.++++.+..|++--++.|..
T Consensus 231 y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~--------~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g 302 (433)
T KOG3810|consen 231 YSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAP--------NPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWG 302 (433)
T ss_pred hcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCC--------CchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhh
Confidence 344556666777777777888888888887776421 001111223334566777888889998877766653
No 289
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=61.16 E-value=71 Score=33.75 Aligned_cols=115 Identities=7% Similarity=-0.073 Sum_probs=57.5
Q ss_pred hhHHHHHHH-HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhh
Q 009862 347 SASFLISAF-TTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVA 425 (523)
Q Consensus 347 ~~~~l~~~i-~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 425 (523)
....+...+ +++..++|.+++.++.+. +||.+.+ ..++-.+..-++..+..........+. ...++.....+...+
T Consensus 282 ~y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i-~v~lR~lfiPlF~~cn~~~~~v~~~~~-~~~~~l~~~lglsnG 358 (406)
T KOG1479|consen 282 WYALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTI-PVLLRLLFIPLFLLCNYPPLPVVFESD-GWFIFLMSLLGLSNG 358 (406)
T ss_pred hhHHHHHHHHhHHHHHhhhhhhhcccCC-CCceehH-HHHHHHHHHHHHHHhccCCCCceecCc-hHHHHHHHHHHhccc
Confidence 344445555 788888887777766554 3444333 222233322222222211100001111 233344444445555
Q ss_pred ccccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHH
Q 009862 426 AYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTY 464 (523)
Q Consensus 426 ~~~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~ 464 (523)
-...+...++++..|++.+-.+-.+..++...|.+.|..
T Consensus 359 Yltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~ 397 (406)
T KOG1479|consen 359 YLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSL 397 (406)
T ss_pred hHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhH
Confidence 556666777888888887766666655554444444433
No 290
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.88 E-value=38 Score=28.59 Aligned_cols=54 Identities=17% Similarity=0.199 Sum_probs=36.3
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--chhHHHHHHHHHHHHHHHh
Q 009862 440 PTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG--LAGAFGVYAVVCFISWVFV 493 (523)
Q Consensus 440 P~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G--~~~~f~i~~i~~~i~~v~~ 493 (523)
.++.++.+.++-...-.+++++.....|++++.+- ..|.++++.++.++++++.
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~ln 91 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLN 91 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 34677888888878888899999999999998762 2334444444444444443
No 291
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=54.07 E-value=90 Score=32.38 Aligned_cols=109 Identities=18% Similarity=0.093 Sum_probs=56.9
Q ss_pred chhHHHhhhhhhhhhhhhhhhcCCCCCCCCCCCcccccCcccHHHHhccchhhHHHHHHHHHHHHHhhhhhhhhhchHHH
Q 009862 249 GEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQI 328 (523)
Q Consensus 249 ~~~~~a~~l~~~~~l~~~~~l~E~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~~~p~i 328 (523)
..+..+..+..+.+.++...-+|...... .+..........++.+++. ++++...+++.+...+-+..+..|.|.+
T Consensus 196 aPF~~a~~~l~~~~~~I~~~W~ENyg~~~-~~~~~~~~~~~a~~~i~~d---~ril~LG~~qslFE~smy~FVflWtPaL 271 (354)
T PF05631_consen 196 APFDAAIVLLAVAAVLILKTWPENYGDTS-SSSSLSGSFREAWRAILSD---PRILLLGLIQSLFEGSMYLFVFLWTPAL 271 (354)
T ss_pred chHHHHHHHHHHHHHHHHhcccccCCCcc-cccchHHHHHHHHHHHHcC---chhHHHHHHHHHHHHHHHHheeeeecee
Confidence 45555555555555555554444432111 1111111112234455543 5566666666666666677778899998
Q ss_pred HHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009862 329 LEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDV 373 (523)
Q Consensus 329 l~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr 373 (523)
-.. +-+ .--.++...+.+..++|+.+..++..+
T Consensus 272 ~~~--------~~~----~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 272 DPD--------DEE----LPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred cCC--------CCC----CCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 622 011 123345556666777777777655544
No 292
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=52.07 E-value=2.1e+02 Score=30.17 Aligned_cols=35 Identities=11% Similarity=0.259 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHH
Q 009862 455 YWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFIS 489 (523)
Q Consensus 455 ~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~ 489 (523)
=....++.|.+.|.++.+.+.+....++++...+.
T Consensus 184 Dq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~vs 218 (503)
T KOG2601|consen 184 DQSTNLLAPVITGLIITFVSLRASAGTFAAWALVS 218 (503)
T ss_pred hhhhhchhhhhhcccceeechhhhhhhhHHHHHHH
Confidence 34456788888888888888777666666665553
No 293
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=48.45 E-value=1.5e+02 Score=24.31 Aligned_cols=38 Identities=21% Similarity=-0.020 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHH
Q 009862 349 SFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPV 386 (523)
Q Consensus 349 ~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l 386 (523)
.........++..++..+.+++.|..|.+..+.+..++
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAIL 126 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHH
Confidence 33445566677778888888888887776655544333
No 294
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=47.18 E-value=3.3e+02 Score=31.20 Aligned_cols=25 Identities=20% Similarity=0.195 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 009862 350 FLISAFTTFLMLPCIGVAMKLMDVA 374 (523)
Q Consensus 350 ~l~~~i~~l~~lig~~l~g~LsDr~ 374 (523)
.+.+.+..+..++++++.-.+.|+.
T Consensus 160 ~~~sl~l~i~~l~~p~~~q~viD~V 184 (709)
T COG2274 160 LLASLLLQLLALATPLFSQIVIDKV 184 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445556677778888888899985
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.62 E-value=58 Score=27.56 Aligned_cols=29 Identities=17% Similarity=-0.074 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHhh-CChHHHHHHHHHHH
Q 009862 360 MLPCIGVAMKLMDVA-GRRKLLLTTIPVLI 388 (523)
Q Consensus 360 ~lig~~l~g~LsDr~-GRR~lll~~~~l~~ 388 (523)
+++...+.|||.||| |.++..++.+++.+
T Consensus 55 GilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 55 GILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 334445678999986 67776555444433
No 296
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=46.45 E-value=71 Score=26.07 Aligned_cols=41 Identities=17% Similarity=0.367 Sum_probs=25.5
Q ss_pred ccHHHHhccchhhHHHHHHHHHHHHHhhhhhhhhhchHHHHHh
Q 009862 289 PSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQ 331 (523)
Q Consensus 289 ~~~~~L~~~~~~~~~li~~~l~~~~~~~g~~~i~~~~p~il~~ 331 (523)
+.++.+.+. ++++.+.+...++..+.++..+..|.|.++..
T Consensus 5 p~f~~L~r~--r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~ 45 (91)
T PF04341_consen 5 PEFQELVRR--RRRLAWPLSAIFLVLYFGFVLLSAFAPELMAT 45 (91)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHcC
Confidence 356666654 34555555554555555677778888888865
No 297
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=43.15 E-value=2.1e+02 Score=29.44 Aligned_cols=19 Identities=21% Similarity=0.083 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHHhhC
Q 009862 357 TFLMLPCIGVAMKLMDVAG 375 (523)
Q Consensus 357 ~l~~lig~~l~g~LsDr~G 375 (523)
++.+.+...+-=++.++..
T Consensus 177 a~lya~~nV~~E~~v~~~~ 195 (334)
T PF06027_consen 177 AILYAVSNVLEEKLVKKAP 195 (334)
T ss_pred HHHHHHHHHHHHHhcccCC
Confidence 3334444444444444433
No 298
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=41.83 E-value=47 Score=38.66 Aligned_cols=50 Identities=12% Similarity=-0.035 Sum_probs=23.8
Q ss_pred ccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 009862 340 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLI 392 (523)
Q Consensus 340 ~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l 392 (523)
.+|++..... ..+.+++.-+.=++..+++-|-|.-.+.+..++..-++.+
T Consensus 962 vlGIse~VmG---lTfLA~GTSIPDlisSvivArkG~gdMAVan~iGSNIFnI 1011 (1096)
T TIGR00927 962 TIGISEEIMG---LTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDI 1011 (1096)
T ss_pred hcCCChhhhh---hhhhhhhcccHHHHHHHHHHHccCCcceeeeccccchhee
Confidence 4566553222 2233334434444455555555766655555555444444
No 299
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=40.09 E-value=1.3e+02 Score=32.19 Aligned_cols=14 Identities=7% Similarity=0.202 Sum_probs=11.0
Q ss_pred CCCCCCCceeeecC
Q 009862 32 EPTDEKDKIRLYGP 45 (523)
Q Consensus 32 ~~~~~~~~~~~~~~ 45 (523)
....++|++.||.-
T Consensus 32 h~Yk~~e~VvLw~N 45 (593)
T KOG1277|consen 32 HRYKDGEEVVLWMN 45 (593)
T ss_pred cccccCCeeEEEEe
Confidence 56788889999853
No 300
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=37.42 E-value=29 Score=37.71 Aligned_cols=16 Identities=19% Similarity=-0.137 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHh
Q 009862 358 FLMLPCIGVAMKLMDV 373 (523)
Q Consensus 358 l~~lig~~l~g~LsDr 373 (523)
+..++..+++|+.+-|
T Consensus 370 ~l~v~~G~~agY~s~r 385 (628)
T KOG1278|consen 370 LLFVFMGFVAGYVSAR 385 (628)
T ss_pred HHHHHHHHhhhhhhhh
Confidence 3444445555555554
No 301
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=36.70 E-value=4.9e+02 Score=27.05 Aligned_cols=31 Identities=6% Similarity=0.051 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHhhCChHHHHHHHHHHH
Q 009862 358 FLMLPCIGVAMKLMDVAGRRKLLLTTIPVLI 388 (523)
Q Consensus 358 l~~lig~~l~g~LsDr~GRR~lll~~~~l~~ 388 (523)
+.-+.+.++.+.++.++|-|.+++++.....
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ 99 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYA 99 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4445566666689999999999876655443
No 302
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=35.91 E-value=1.6e+02 Score=27.38 Aligned_cols=50 Identities=20% Similarity=0.296 Sum_probs=24.8
Q ss_pred cCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhhe
Q 009862 439 FPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 439 fP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~ 495 (523)
-|.+.+.+++++..+...+-.++...+ .+|.....+.-++.++.+.+..+
T Consensus 110 ~~~~~~~~gMsIvcv~~Si~ti~~~~~-------s~s~~~~ti~yIiL~iLf~~Ya~ 159 (189)
T PF05313_consen 110 NPGANNNVGMSIVCVIMSIITIIVNSV-------SGSSGAYTISYIILAILFCIYAF 159 (189)
T ss_pred cCCCcceehhHHHHHHHHHHHHHHHhh-------hHhHHHHHHHHHHHHHHHHHhee
Confidence 466677788888655544433332222 24444444444444444443333
No 303
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=35.79 E-value=2.6e+02 Score=29.85 Aligned_cols=24 Identities=8% Similarity=0.018 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHhhCChHHHHHHHH
Q 009862 362 PCIGVAMKLMDVAGRRKLLLTTIP 385 (523)
Q Consensus 362 ig~~l~g~LsDr~GRR~lll~~~~ 385 (523)
...+++-++.+.+.++++..+=.+
T Consensus 306 ~LTF~~fflfE~~~~~~iHpiQY~ 329 (430)
T PF06123_consen 306 GLTFLAFFLFELLSKLRIHPIQYL 329 (430)
T ss_pred HHHHHHHHHHHHHhcCcccHHHHH
Confidence 334455567788887776544333
No 304
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=33.91 E-value=3e+02 Score=23.45 Aligned_cols=31 Identities=10% Similarity=-0.047 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHhhCChHHHHHHHHHH
Q 009862 357 TFLMLPCIGVAMKLMDVAGRRKLLLTTIPVL 387 (523)
Q Consensus 357 ~l~~lig~~l~g~LsDr~GRR~lll~~~~l~ 387 (523)
.+...++.+++|+++-|.-+++=++.+....
T Consensus 44 ~~i~~ls~~~GG~~a~~~~~~kG~l~G~~~G 74 (116)
T PF12670_consen 44 VIIYILSVFIGGFYAGRKAGSKGWLHGLLVG 74 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 3445566666666666544444444444433
No 305
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=33.14 E-value=1.7e+02 Score=33.38 Aligned_cols=29 Identities=28% Similarity=0.408 Sum_probs=14.9
Q ss_pred HHHHHHhh----CChHHHHHHHHHHHHHHHHHH
Q 009862 367 AMKLMDVA----GRRKLLLTTIPVLIVSLIILV 395 (523)
Q Consensus 367 ~g~LsDr~----GRR~lll~~~~l~~i~~l~l~ 395 (523)
++-+.|.= ||.+-++++.++++++.+...
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ 75 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQ 75 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33466643 445555555555555544443
No 306
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=32.61 E-value=3e+02 Score=31.51 Aligned_cols=27 Identities=22% Similarity=0.352 Sum_probs=13.5
Q ss_pred HHHHHhh----CChHHHHHHHHHHHHHHHHH
Q 009862 368 MKLMDVA----GRRKLLLTTIPVLIVSLIIL 394 (523)
Q Consensus 368 g~LsDr~----GRR~lll~~~~l~~i~~l~l 394 (523)
+-++|.= ||.+-++++.++++++.+..
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v 74 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSV 74 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466643 44455555555555444443
No 307
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=30.34 E-value=14 Score=37.42 Aligned_cols=113 Identities=5% Similarity=-0.036 Sum_probs=2.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-CChHHHHHHHHHHHHHHHHHHHHHhhhc---cchhhhHHHHHHHHHHHHHHHhhcc
Q 009862 352 ISAFTTFLMLPCIGVAMKLMDVA-GRRKLLLTTIPVLIVSLIILVISETLQL---ISPVLKAGISTACVIIYFCCFVAAY 427 (523)
Q Consensus 352 ~~~i~~l~~lig~~l~g~LsDr~-GRR~lll~~~~l~~i~~l~l~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~ 427 (523)
...+++++.++|..+..+..=+. .+|.+++ ..+.=.++..++..+..... .......-...+++.++.++..+..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 45567888888888887643211 2344333 22222333222222211100 0000111122333333334444445
Q ss_pred ccccceeeecccCcchhhHHHHHHHHHHHHHHHHHHHH
Q 009862 428 GPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYT 465 (523)
Q Consensus 428 ~~i~~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l 465 (523)
..+...+.++..+++.|-.+-.+...+-.+|-.+|..+
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp -HHHH---------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666677888888888877777666666666666554
No 308
>PF12832 MFS_1_like: MFS_1 like family
Probab=29.60 E-value=2.5e+02 Score=21.99 Aligned_cols=40 Identities=8% Similarity=-0.046 Sum_probs=30.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHH
Q 009862 444 RGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYA 483 (523)
Q Consensus 444 Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~ 483 (523)
-..-+|+......+..++++.+.+.+.|..+-+.......
T Consensus 33 ~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 33 SPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGS 72 (77)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHH
Confidence 3445777777789999999999999999998765554433
No 309
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=29.32 E-value=18 Score=35.79 Aligned_cols=17 Identities=12% Similarity=0.575 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhh
Q 009862 478 AFGVYAVVCFISWVFVF 494 (523)
Q Consensus 478 ~f~i~~i~~~i~~v~~~ 494 (523)
.||++..+++++++.+.
T Consensus 170 L~WL~LFlaiLIWlY~H 186 (381)
T PF05297_consen 170 LYWLLLFLAILIWLYVH 186 (381)
T ss_dssp -----------------
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 35666666666776654
No 310
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.56 E-value=4.8e+02 Score=24.14 Aligned_cols=40 Identities=18% Similarity=0.340 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhh
Q 009862 455 YWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVF 494 (523)
Q Consensus 455 ~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~ 494 (523)
..++..+.++......+.......|.++-++.++.-.+.+
T Consensus 116 ~~l~~~~~Tly~al~~ks~iLtllf~ilq~laliwYslSy 155 (175)
T KOG2887|consen 116 SYLATMVLTLYVALWLKSKILTLLFCILQVLALIWYSLSY 155 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456666666666666665555555555555555444444
No 311
>PRK11598 putative metal dependent hydrolase; Provisional
Probab=28.33 E-value=7.3e+02 Score=27.44 Aligned_cols=29 Identities=24% Similarity=-0.179 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHhhCChHHHHHHHHHHHHH
Q 009862 362 PCIGVAMKLMDVAGRRKLLLTTIPVLIVS 390 (523)
Q Consensus 362 ig~~l~g~LsDr~GRR~lll~~~~l~~i~ 390 (523)
+..++...++-|+-.|+++++-+++.+++
T Consensus 60 ~~~~~~~l~~~~~~~k~~~~~l~~~sa~~ 88 (545)
T PRK11598 60 VINIVFTLLSFPWLRRPLACLFILVGAAA 88 (545)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455666667777766555554443
No 312
>PRK11715 inner membrane protein; Provisional
Probab=28.23 E-value=4.1e+02 Score=28.51 Aligned_cols=22 Identities=9% Similarity=0.054 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHhhCChHHHHHH
Q 009862 362 PCIGVAMKLMDVAGRRKLLLTT 383 (523)
Q Consensus 362 ig~~l~g~LsDr~GRR~lll~~ 383 (523)
...+++-++.+.+.++++.-+=
T Consensus 312 ~LTF~~fFlfE~~~~~~iHpiQ 333 (436)
T PRK11715 312 ALTFAAFFLFELLKKLRIHPVQ 333 (436)
T ss_pred HHHHHHHHHHHHhcCceecHHH
Confidence 3344555678888877664443
No 313
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=27.55 E-value=1.6e+02 Score=30.51 Aligned_cols=19 Identities=21% Similarity=0.079 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHhhC
Q 009862 357 TFLMLPCIGVAMKLMDVAG 375 (523)
Q Consensus 357 ~l~~lig~~l~g~LsDr~G 375 (523)
.+..++..++.|++.-|+|
T Consensus 5 ~i~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 5 AILPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 3444555666667776653
No 314
>KOG3533 consensus Inositol 1,4,5-trisphosphate receptor [Signal transduction mechanisms]
Probab=25.52 E-value=1.4e+03 Score=28.50 Aligned_cols=32 Identities=25% Similarity=0.208 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCChHH
Q 009862 348 ASFLISAFTTFLMLPCIGVAMKLMDVAGRRKL 379 (523)
Q Consensus 348 ~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~l 379 (523)
...+++.+..++.+++..++-++...+|-|++
T Consensus 2286 ls~l~sll~W~av~~s~~i~~~l~k~~gir~~ 2317 (2706)
T KOG3533|consen 2286 LSSLGSLLSWFAVFISFLIAHYLRKIYGIRTI 2317 (2706)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcchhhhHHH
Confidence 34466667777777777777788877888873
No 315
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=25.10 E-value=1.9e+02 Score=25.75 Aligned_cols=23 Identities=22% Similarity=0.299 Sum_probs=17.5
Q ss_pred ecccCcchhhHHHHHHHHHHHHH
Q 009862 436 AEIFPTKVRGICIAICAMAYWIC 458 (523)
Q Consensus 436 aElfP~~~Rg~a~gi~~~~~~lG 458 (523)
.|+||+..|....+.++...+..
T Consensus 61 kdi~P~~~R~~i~~~~~~~~~~~ 83 (137)
T PF04281_consen 61 KDIFPPSVRNWISSTVSTTSSAV 83 (137)
T ss_pred hccCCHHHHHHHHHHHHHHHHHH
Confidence 79999999988887765554443
No 316
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=24.59 E-value=7.1e+02 Score=24.81 Aligned_cols=33 Identities=24% Similarity=0.156 Sum_probs=24.5
Q ss_pred hhCchhHHHHHHHHHHHHHHHhheeccCCCCCC
Q 009862 472 SIGLAGAFGVYAVVCFISWVFVFLRVPETKGMP 504 (523)
Q Consensus 472 ~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~ 504 (523)
..|....|.+--...++..+...++++|.|.+.
T Consensus 218 ~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k 250 (269)
T PF06800_consen 218 KNGVATAFTLSQLGVVISTLGGIFILKEKKTKK 250 (269)
T ss_pred hccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence 556666777766777777788888899988653
No 317
>COG5102 SFT2 Membrane protein involved in ER to Golgi transport [Intracellular trafficking and secretion]
Probab=24.54 E-value=3.9e+02 Score=24.52 Aligned_cols=18 Identities=39% Similarity=0.563 Sum_probs=7.8
Q ss_pred hHHHHHHHHHHHHHHHhh
Q 009862 477 GAFGVYAVVCFISWVFVF 494 (523)
Q Consensus 477 ~~f~i~~i~~~i~~v~~~ 494 (523)
.+|.+.-++.++.-.+.+
T Consensus 160 i~f~~l~vvsfi~y~itf 177 (201)
T COG5102 160 IAFCFLQVVSFIMYSITF 177 (201)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 344444444444444433
No 318
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=24.03 E-value=5.3e+02 Score=24.30 Aligned_cols=47 Identities=30% Similarity=0.472 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHHHHHHhhe
Q 009862 446 ICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFL 495 (523)
Q Consensus 446 ~a~gi~~~~~~lG~iig~~l~~~l~~~~G~~~~f~i~~i~~~i~~v~~~~ 495 (523)
..+++..+..|++.+....+.| ..++.....+++.++.+++.++.++
T Consensus 150 ~~~~~~~~~~w~~~~~~~~~lp---~~inp~l~~~~~iiig~i~~~~~~~ 196 (206)
T PF06570_consen 150 ILISVLAMVLWIVIFVLTSFLP---PVINPVLPPWVYIIIGVIAFALRFY 196 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc---ccCCcCCCHHHHHHHHHHHHHHHHH
Confidence 3334444444444443333322 2233334445555555544444433
No 319
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=23.62 E-value=7.9e+02 Score=24.98 Aligned_cols=105 Identities=10% Similarity=-0.093 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhcccccc
Q 009862 352 ISAFTTFLMLPCIGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIP 431 (523)
Q Consensus 352 ~~~i~~l~~lig~~l~g~LsDr~GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~ 431 (523)
...+....-++..-+++.+++|-|.-.+-+=+..+.+.....+.... ..+.|..+++..+....++...
T Consensus 12 ~~~l~~atPLllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~-------t~spw~gl~~a~l~g~l~~ll~---- 80 (304)
T COG1079 12 ASILRAATPLLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYG-------TGSPWLGLLAAALVGALFGLLH---- 80 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHc-------cccHHHHHHHHHHHHHHHHHHH----
Confidence 33344444555666788999999887654433332222222111100 1122333333333333332222
Q ss_pred ceeeecccCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009862 432 NILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPV 468 (523)
Q Consensus 432 ~~~~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~ 468 (523)
.+.+.-.-.++--+++++......+..+++..+++.
T Consensus 81 -a~~ti~l~~nqiisG~alnl~a~Glt~fl~~~~~~~ 116 (304)
T COG1079 81 -AFLTIKLRANQIISGLALNLLASGLTAFLGQSIFGQ 116 (304)
T ss_pred -HHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhcc
Confidence 222333445555666666555555555555554443
No 320
>COG0733 Na+-dependent transporters of the SNF family [General function prediction only]
Probab=23.61 E-value=8.2e+02 Score=26.23 Aligned_cols=26 Identities=12% Similarity=0.270 Sum_probs=12.4
Q ss_pred HHHHHHHHHhhhhhhhhhchHHHHHh
Q 009862 306 GVGIQILQQFSGINGVLYYTPQILEQ 331 (523)
Q Consensus 306 ~~~l~~~~~~~g~~~i~~~~p~il~~ 331 (523)
++.-.++....|...+..|..++-++
T Consensus 219 AlGQ~FFsLSlG~g~mitYsSYL~k~ 244 (439)
T COG0733 219 ALGQAFFSLSLGFGIMITYSSYLSKK 244 (439)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 33333444444555555555554443
No 321
>COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms]
Probab=22.74 E-value=9.5e+02 Score=25.62 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhchHHHHHhcCchhhhhccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCCh
Q 009862 301 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRR 377 (523)
Q Consensus 301 ~~~li~~~l~~~~~~~g~~~i~~~~p~il~~~G~~~~~~~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR 377 (523)
.+.++..+++...++.-...+..+.+.-+...++ .......+..+...++.-....++.++|+|
T Consensus 24 ~P~i~~~l~~~l~~~vD~~~vG~~~~~alaav~l-------------a~~i~~~~~~~~~gl~~g~~~liaq~~Ga~ 87 (455)
T COG0534 24 IPIILGNLLQTLYGLVDTFMVGHLGAEALAAVGL-------------ANPIFFLIIAIFIGLGTGTTVLVAQAIGAG 87 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH-------------HHHHHHHHHHHHHHHHHhHHHHHHHHHcCC
Confidence 4555555555555554444444444444443322 122333445555566666677788888865
No 322
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=22.35 E-value=82 Score=32.25 Aligned_cols=125 Identities=12% Similarity=0.083 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHhh--CChHHHHHHHHHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHhhcccccccee
Q 009862 357 TFLMLPCIGVAMKLMDVA--GRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNIL 434 (523)
Q Consensus 357 ~l~~lig~~l~g~LsDr~--GRR~lll~~~~l~~i~~l~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~ 434 (523)
.+-.++.-+.+.++.||+ |.|..+ ..++.+.++++.++..+.. +.++-+.....+.+.+-+.+.-
T Consensus 72 ilPsL~iKl~~Pff~~rfpf~~Ri~~--~v~~sa~s~~lVafs~s~~-----------~sL~GV~~aSissGlGEiTFL~ 138 (409)
T KOG3880|consen 72 ILPSLAIKLTAPFFIHRFPFGFRIAL--VVLLSALSFFLVAFSNSVP-----------MSLLGVVFASISSGLGEITFLA 138 (409)
T ss_pred hhHHHHHHHhchhhhhhcccchHHHH--HHHHHhcceEEEEeccchh-----------HHHhhhhhhhhcCCcceeehhh
Confidence 344556666777888885 555433 2333344444333322221 2222222333444555444443
Q ss_pred eecccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CchhHHHHHHHHHHHHHHHhheecc
Q 009862 435 CAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI--GLAGAFGVYAVVCFISWVFVFLRVP 498 (523)
Q Consensus 435 ~aElfP~~~Rg~a~gi~~~~~~lG~iig~~l~~~l~~~~--G~~~~f~i~~i~~~i~~v~~~~~lp 498 (523)
.+..+|...-+ -.+.....++++|..-...+.++. ..+.+.++...+.++.++..++.++
T Consensus 139 lss~Y~~~~i~----~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~ 200 (409)
T KOG3880|consen 139 LSSRYPSIVIA----GWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLK 200 (409)
T ss_pred hhccCCCceec----cccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeC
Confidence 44445543321 112222233444444444444433 3455666776666665555555553
No 323
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=21.95 E-value=1.1e+02 Score=25.86 Aligned_cols=35 Identities=11% Similarity=-0.135 Sum_probs=25.6
Q ss_pred HHhhCchhHHHHHHHHHHHHHHHhheeccCCCCCC
Q 009862 470 LSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMP 504 (523)
Q Consensus 470 ~~~~G~~~~f~i~~i~~~i~~v~~~~~lpEtk~~~ 504 (523)
.+..+|..++++...++++.+.+.+.+.|++.-++
T Consensus 54 ~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i~~ 88 (105)
T PF10183_consen 54 RDWEGWELPFFFGFSGSLVFGGVFLAYKPDTSIQT 88 (105)
T ss_pred chHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH
Confidence 35667888888777777777777777789887643
No 324
>PF00873 ACR_tran: AcrB/AcrD/AcrF family; InterPro: IPR001036 The Escherichia coli acrA and acrB genes encode a multi-drug efflux system that is believed to protect the bacterium against hydrophobic inhibitors []. The E. coli AcrB protein is a transporter that is energized by proton-motive force and that shows the widest substrate specificity among all known multidrug pumps, ranging from most of the currently used antibiotics, disinfectants, dyes, and detergents to simple solvents. The structure of ligand-free AcrB shows that it is a homotrimer of 110kDa per subunit. Each subunit contains 12 transmembrane helices and two large periplasmic domains (each exceeding 300 residues) between helices 1 and 2, and helices 7 and 8. X-ray analysis of the overexpressed AcrB protein demonstrated that the three periplasmic domains form, in the centre, a funnel-like structure and a connected narrow (or closed) pore. The pore is opened to the periplasm through three vestibules located at subunit interfaces. These vestibules were proposed to allow direct access of drugs from the periplasm as well as the outer leaflet of the cytoplasmic membrane. The three transmembrane domains of AcrB protomers form a large, 30A-wide central cavity that spans the cytoplasmic membrane and extends to the cytoplasm X-ray crystallographic structures of the trimeric AcrB pump from E. coli with four structurally diverse ligands demonstrated that three molecules of ligand bind simultaneously to the extremely large central cavity of 5000 cubic angstroms, primarily by hydrophobic, aromatic stacking and van der Waals interactions. Each ligand uses a slightly different subset of AcrB residues for binding. The bound ligand molecules often interact with each other, stabilising the binding. ; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 2V50_B 1T9U_A 2HRT_B 3NOC_A 3NOG_A 4DX7_A 1OYD_A 3AOB_A 1T9V_A 4DX6_B ....
Probab=21.65 E-value=6.6e+02 Score=30.08 Aligned_cols=21 Identities=29% Similarity=0.230 Sum_probs=9.4
Q ss_pred cCCCchhhHHHHHHHHHHHHHH
Q 009862 341 LGISSESASFLISAFTTFLMLP 362 (523)
Q Consensus 341 lgls~~~~~~l~~~i~~l~~li 362 (523)
+|++- +...+...+.+++.++
T Consensus 379 ~g~sl-N~~SL~gl~laiG~lV 399 (1021)
T PF00873_consen 379 FGISL-NIMSLAGLILAIGMLV 399 (1021)
T ss_dssp TTTTB-EHHHHHHHHHHHHHHH
T ss_pred cCCCc-hHHHHHhHHHhccccc
Confidence 44444 3344444444555444
No 325
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=21.60 E-value=4.7e+02 Score=21.68 Aligned_cols=17 Identities=12% Similarity=0.137 Sum_probs=9.4
Q ss_pred HhhCChHHHHHHHHHHH
Q 009862 372 DVAGRRKLLLTTIPVLI 388 (523)
Q Consensus 372 Dr~GRR~lll~~~~l~~ 388 (523)
+|+.+|+.+.+..+..+
T Consensus 84 er~~~~~~~a~~l~~~G 100 (113)
T PF13536_consen 84 ERLSPRRWLAILLILIG 100 (113)
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 67777766544433333
No 326
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=21.36 E-value=35 Score=29.82 Aligned_cols=13 Identities=8% Similarity=0.007 Sum_probs=5.2
Q ss_pred hHHHHHHHHHHHH
Q 009862 477 GAFGVYAVVCFIS 489 (523)
Q Consensus 477 ~~f~i~~i~~~i~ 489 (523)
|++++++++++++
T Consensus 2 W~l~~iii~~i~l 14 (130)
T PF12273_consen 2 WVLFAIIIVAILL 14 (130)
T ss_pred eeeHHHHHHHHHH
Confidence 3444443333333
No 327
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=20.67 E-value=5.6e+02 Score=23.01 Aligned_cols=42 Identities=14% Similarity=0.109 Sum_probs=28.5
Q ss_pred ccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHH
Q 009862 340 NLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRRKLLLT 382 (523)
Q Consensus 340 ~lgls~~~~~~l~~~i~~l~~lig~~l~g~LsDr~GRR~lll~ 382 (523)
++|++. ........+.++.-+++.+++.++++++++--.+.+
T Consensus 66 eiGi~E-kslL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~~~ 107 (150)
T COG3086 66 ELGIEE-KSLLKSALLVYIFPLVGLFLGAILAQYLFFSELIVI 107 (150)
T ss_pred EEccCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 345554 233444556677778888888999999988765543
No 328
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=20.58 E-value=5.1e+02 Score=21.67 Aligned_cols=29 Identities=17% Similarity=-0.023 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHH
Q 009862 361 LPCIGVAMKLMDVAGRRKLLLTTIPVLIV 389 (523)
Q Consensus 361 lig~~l~g~LsDr~GRR~lll~~~~l~~i 389 (523)
++|.+++-||=.+++-++.+.+.+++.++
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 34444444554467876655544444433
Done!