Query 009868
Match_columns 523
No_of_seqs 257 out of 1700
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 14:47:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009868.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009868hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ezw_A Glycerol kinase; glycer 100.0 4E-102 1E-106 836.1 50.7 494 6-520 3-498 (526)
2 4e1j_A Glycerol kinase; struct 100.0 2E-101 8E-106 827.9 50.0 495 1-517 20-518 (520)
3 2p3r_A Glycerol kinase; glycer 100.0 1E-100 4E-105 821.3 51.6 494 6-520 2-497 (510)
4 3g25_A Glycerol kinase; IDP007 100.0 1E-100 5E-105 819.7 51.5 496 3-519 2-499 (501)
5 3h3n_X Glycerol kinase; ATP-bi 100.0 2E-100 8E-105 818.8 52.4 492 6-518 4-497 (506)
6 3ifr_A Carbohydrate kinase, FG 100.0 1.3E-99 5E-104 812.7 45.4 483 1-518 1-495 (508)
7 3ll3_A Gluconate kinase; xylul 100.0 7.1E-99 2E-103 806.3 48.3 477 5-518 2-488 (504)
8 3hz6_A Xylulokinase; xylulose, 100.0 1E-98 3E-103 806.4 45.3 479 6-518 4-502 (511)
9 2w40_A Glycerol kinase, putati 100.0 5.2E-97 2E-101 793.1 51.5 494 6-518 3-502 (503)
10 2d4w_A Glycerol kinase; alpha 100.0 2.4E-96 8E-101 787.7 49.3 491 7-519 2-498 (504)
11 2dpn_A Glycerol kinase; thermu 100.0 5E-96 2E-100 784.0 49.9 491 7-520 2-493 (495)
12 2zf5_O Glycerol kinase; hypert 100.0 7.7E-96 3E-100 782.9 47.1 485 6-519 2-488 (497)
13 3jvp_A Ribulokinase; PSI-II, N 100.0 1.9E-93 6.4E-98 775.6 41.5 481 6-516 4-539 (572)
14 2itm_A Xylulose kinase, xylulo 100.0 7.9E-93 2.7E-97 757.5 42.9 472 8-518 1-482 (484)
15 3l0q_A Xylulose kinase; xlylul 100.0 1.8E-92 6E-97 765.6 42.3 477 6-519 4-540 (554)
16 4bc3_A Xylulose kinase; transf 100.0 2.3E-90 8E-95 746.1 41.2 475 5-518 8-532 (538)
17 3i8b_A Xylulose kinase; strain 100.0 1.3E-88 4.4E-93 727.3 41.7 458 6-507 4-504 (515)
18 3h6e_A Carbohydrate kinase, FG 100.0 4.9E-82 1.7E-86 669.5 33.8 443 1-515 1-471 (482)
19 2uyt_A Rhamnulokinase; rhamnos 100.0 9.3E-82 3.2E-86 673.5 26.5 465 4-513 1-486 (489)
20 1hux_A Activator of (R)-2-hydr 99.8 8E-18 2.8E-22 164.9 16.4 125 321-470 131-257 (270)
21 4ehu_A Activator of 2-hydroxyi 98.9 7.6E-08 2.6E-12 94.1 20.0 127 320-470 128-255 (276)
22 3h1q_A Ethanolamine utilizatio 98.7 4.1E-07 1.4E-11 88.5 18.5 70 384-466 201-271 (272)
23 2qm1_A Glucokinase; alpha-beta 98.7 2.4E-08 8.3E-13 100.0 10.0 96 2-113 1-97 (326)
24 1z05_A Transcriptional regulat 98.5 4.1E-07 1.4E-11 94.7 11.1 93 5-114 106-199 (429)
25 2hoe_A N-acetylglucosamine kin 98.5 2.9E-07 9.8E-12 94.3 8.9 93 5-113 85-178 (380)
26 1z6r_A MLC protein; transcript 98.4 3E-07 1E-11 95.1 8.5 93 4-113 82-176 (406)
27 4db3_A Glcnac kinase, N-acetyl 98.4 8.3E-07 2.8E-11 88.9 11.0 83 8-111 25-107 (327)
28 3vgl_A Glucokinase; ROK family 98.4 4.1E-07 1.4E-11 91.0 7.4 85 7-114 2-87 (321)
29 2yhw_A Bifunctional UDP-N-acet 98.3 1E-06 3.6E-11 88.8 8.9 91 6-114 29-122 (343)
30 3r8e_A Hypothetical sugar kina 98.3 7.9E-07 2.7E-11 88.9 7.6 90 5-114 17-108 (321)
31 3htv_A D-allose kinase, alloki 98.3 4E-07 1.4E-11 90.6 4.3 88 5-112 5-93 (310)
32 2ch5_A NAGK protein; transfera 98.2 3.3E-06 1.1E-10 85.1 8.7 76 5-90 4-80 (347)
33 1zc6_A Probable N-acetylglucos 98.2 5.1E-06 1.7E-10 82.3 9.8 71 7-88 11-83 (305)
34 3vov_A Glucokinase, hexokinase 98.0 5.6E-06 1.9E-10 81.9 6.5 86 8-114 2-89 (302)
35 4htl_A Beta-glucoside kinase; 98.0 8.1E-06 2.8E-10 80.5 7.6 81 8-113 5-87 (297)
36 2ews_A Pantothenate kinase; PA 97.9 9.4E-05 3.2E-09 72.0 13.4 140 317-467 137-286 (287)
37 3epq_A Putative fructokinase; 97.9 1.9E-05 6.6E-10 78.0 8.0 80 7-114 3-88 (302)
38 3mcp_A Glucokinase; structural 97.9 6.9E-06 2.4E-10 83.3 4.7 93 1-114 3-99 (366)
39 2aa4_A Mannac kinase, putative 97.9 1.6E-05 5.6E-10 77.8 7.0 83 8-113 2-86 (289)
40 2i7n_A Pantothenate kinase 1; 97.9 0.00011 3.7E-09 73.5 12.6 136 320-467 206-358 (360)
41 2ap1_A Putative regulator prot 97.8 5.4E-05 1.8E-09 75.6 10.1 79 6-105 23-101 (327)
42 2e2o_A Hexokinase; acetate and 97.7 4.4E-05 1.5E-09 75.1 7.5 55 8-68 3-57 (299)
43 1woq_A Inorganic polyphosphate 97.7 6.7E-05 2.3E-09 72.6 8.6 89 6-113 11-104 (267)
44 4b9q_A Chaperone protein DNAK; 97.7 0.00013 4.5E-09 79.1 10.5 84 384-476 304-388 (605)
45 2gup_A ROK family protein; sug 97.5 0.00011 3.8E-09 71.9 7.0 79 8-113 5-85 (292)
46 3lm2_A Putative kinase; struct 97.2 0.00017 5.9E-09 67.8 3.5 69 6-104 5-73 (226)
47 1zbs_A Hypothetical protein PG 97.1 0.00031 1.1E-08 68.8 5.0 69 8-90 1-69 (291)
48 1saz_A Probable butyrate kinas 97.1 0.00037 1.3E-08 71.1 4.7 81 7-103 2-85 (381)
49 2q2r_A Glucokinase 1, putative 97.0 0.00041 1.4E-08 70.5 4.4 84 6-112 28-115 (373)
50 3qfu_A 78 kDa glucose-regulate 97.0 0.0015 5E-08 66.6 8.6 75 386-469 316-392 (394)
51 3i33_A Heat shock-related 70 k 96.9 0.0015 5.2E-08 66.9 8.2 78 386-472 324-403 (404)
52 2yhx_A Hexokinase B; transfera 96.9 0.0012 4.2E-08 68.5 7.3 58 7-69 61-121 (457)
53 1sz2_A Glucokinase, glucose ki 96.9 0.0011 3.6E-08 66.3 6.4 79 5-111 12-91 (332)
54 4gni_A Putative heat shock pro 96.9 0.0018 6E-08 66.6 7.9 76 386-470 317-401 (409)
55 3djc_A Type III pantothenate k 96.8 0.0023 7.9E-08 61.5 7.7 69 382-468 184-254 (266)
56 1zxo_A Conserved hypothetical 96.8 0.00016 5.6E-09 70.8 -0.4 66 8-89 1-66 (291)
57 1bdg_A Hexokinase; phosphotran 96.8 0.0021 7.3E-08 66.7 7.7 78 7-98 68-149 (451)
58 1cza_N Hexokinase type I; stru 96.6 0.0041 1.4E-07 70.4 8.9 86 7-104 78-169 (917)
59 1dkg_D Molecular chaperone DNA 96.3 0.0033 1.1E-07 63.9 5.5 47 423-469 334-381 (383)
60 2v7y_A Chaperone protein DNAK; 96.3 0.0075 2.6E-07 63.8 8.2 79 386-473 275-354 (509)
61 3o8m_A Hexokinase; rnaseh-like 96.2 0.0089 3E-07 62.3 8.0 92 7-111 80-174 (485)
62 3d2f_A Heat shock protein homo 96.1 0.011 3.8E-07 64.7 8.8 79 386-473 307-386 (675)
63 1cza_N Hexokinase type I; stru 96.0 0.0087 3E-07 67.7 7.5 91 7-110 526-619 (917)
64 3eno_A Putative O-sialoglycopr 96.0 0.032 1.1E-06 55.4 10.8 84 384-477 221-311 (334)
65 3bex_A Type III pantothenate k 96.0 0.0079 2.7E-07 57.3 5.7 67 382-467 180-246 (249)
66 2ivn_A O-sialoglycoprotein end 95.8 0.049 1.7E-06 54.1 10.9 85 383-477 215-306 (330)
67 1yuw_A Heat shock cognate 71 k 95.7 0.017 5.9E-07 61.7 7.9 77 387-472 304-382 (554)
68 2h3g_X Biosynthetic protein; p 95.7 0.021 7.2E-07 54.9 7.6 71 382-469 182-252 (268)
69 3zyy_X Iron-sulfur cluster bin 95.7 0.022 7.4E-07 61.0 8.2 82 6-88 205-297 (631)
70 4a2a_A Cell division protein F 95.6 0.037 1.3E-06 56.8 9.5 62 385-454 294-360 (419)
71 1jce_A ROD shape-determining p 95.6 0.0067 2.3E-07 60.6 3.7 45 424-468 279-324 (344)
72 3vth_A Hydrogenase maturation 95.4 0.053 1.8E-06 59.6 10.2 79 383-471 664-749 (761)
73 3qbx_A Anhydro-N-acetylmuramic 95.3 0.13 4.5E-06 51.3 12.0 105 382-498 255-366 (371)
74 2kho_A Heat shock protein 70; 95.2 0.015 5.3E-07 62.8 5.1 50 423-472 334-384 (605)
75 4g9i_A Hydrogenase maturation 95.0 0.046 1.6E-06 60.3 8.5 84 383-476 676-766 (772)
76 3ttc_A HYPF, transcriptional r 94.9 0.086 2.9E-06 56.8 10.0 135 318-469 502-651 (657)
77 2ych_A Competence protein PILM 94.6 0.075 2.6E-06 53.5 8.3 63 384-454 275-338 (377)
78 3ven_A O-carbamoyltransferase 94.0 0.15 5.2E-06 54.0 9.1 80 384-473 279-361 (576)
79 3cqy_A Anhydro-N-acetylmuramic 93.4 0.26 9.1E-06 49.1 9.1 83 384-479 264-353 (370)
80 4a2a_A Cell division protein F 92.6 0.081 2.8E-06 54.3 4.4 82 1-89 1-86 (419)
81 2zgy_A Plasmid segregation pro 92.2 0.17 5.9E-06 49.7 6.0 43 423-467 273-319 (320)
82 2ivn_A O-sialoglycoprotein end 92.0 0.33 1.1E-05 48.0 7.8 74 8-88 2-76 (330)
83 2ych_A Competence protein PILM 91.8 0.26 8.8E-06 49.5 7.0 57 7-65 13-71 (377)
84 2gup_A ROK family protein; sug 91.6 7.5 0.00026 37.0 17.0 47 423-469 228-287 (292)
85 3hm8_A Hexokinase-3; glucose, 90.9 0.76 2.6E-05 47.1 9.3 58 8-69 60-117 (445)
86 3t69_A Putative 2-dehydro-3-de 90.8 0.21 7.1E-06 49.1 4.7 46 423-469 259-304 (330)
87 3r8e_A Hypothetical sugar kina 90.6 7.9 0.00027 37.6 16.2 70 390-469 238-319 (321)
88 3nuw_A 2-OXO-3-deoxygalactonat 90.5 0.24 8.2E-06 47.9 4.8 37 3-40 2-38 (295)
89 4db3_A Glcnac kinase, N-acetyl 90.0 5.9 0.0002 38.6 14.8 46 423-468 270-325 (327)
90 3en9_A Glycoprotease, O-sialog 89.3 1.5 5E-05 46.4 10.3 85 383-477 219-310 (540)
91 3eno_A Putative O-sialoglycopr 87.5 1 3.5E-05 44.5 7.1 76 6-88 5-81 (334)
92 3f9m_A Glucokinase; hexokinase 86.9 1.2 4E-05 46.0 7.3 59 8-69 78-141 (470)
93 3vov_A Glucokinase, hexokinase 86.7 14 0.00048 35.4 14.9 72 389-470 214-296 (302)
94 1t6c_A Exopolyphosphatase; alp 86.6 1.2 4.1E-05 43.6 7.0 78 8-90 13-94 (315)
95 3mdq_A Exopolyphosphatase; str 85.5 1.7 5.6E-05 42.6 7.4 78 7-90 4-86 (315)
96 2e2o_A Hexokinase; acetate and 84.9 2.2 7.5E-05 41.0 8.0 72 389-470 216-288 (299)
97 2ews_A Pantothenate kinase; PA 84.5 0.63 2.2E-05 44.9 3.7 28 5-33 18-45 (287)
98 3cet_A Conserved archaeal prot 84.4 0.62 2.1E-05 45.7 3.6 68 384-466 247-321 (334)
99 2fsj_A Hypothetical protein TA 82.9 1.7 5.7E-05 43.1 6.2 68 390-468 272-343 (346)
100 3cer_A Possible exopolyphospha 82.7 1.4 4.7E-05 43.7 5.5 84 1-90 11-99 (343)
101 3sk3_A Acetate kinase, acetoki 81.1 1.7 5.9E-05 43.9 5.5 51 388-446 313-364 (415)
102 2f9w_A Pantothenate kinase; CO 80.6 1.6 5.3E-05 41.8 4.7 67 382-466 201-267 (271)
103 4htl_A Beta-glucoside kinase; 80.6 5.9 0.0002 38.0 9.1 72 389-470 214-292 (297)
104 3cj1_A Ectonucleoside triphosp 80.4 0.69 2.4E-05 47.8 2.3 60 5-67 32-99 (456)
105 4apw_A ALP12; actin-like prote 80.3 3.7 0.00013 40.3 7.6 72 386-468 251-323 (329)
106 4ep4_A Crossover junction endo 80.0 5.5 0.00019 34.9 7.7 54 8-69 2-61 (166)
107 3bzc_A TEX; helix-turn-helix, 79.2 3.3 0.00011 45.5 7.3 31 6-36 328-359 (785)
108 1u6z_A Exopolyphosphatase; alp 77.1 3.4 0.00012 43.3 6.5 78 7-90 11-93 (513)
109 2ch5_A NAGK protein; transfera 76.8 8.2 0.00028 37.7 9.0 48 425-472 268-327 (347)
110 3en9_A Glycoprotease, O-sialog 76.6 8.3 0.00028 40.6 9.4 75 6-88 5-80 (540)
111 2yhx_A Hexokinase B; transfera 75.8 6.7 0.00023 40.4 8.2 76 388-471 357-444 (457)
112 1vhx_A Putative holliday junct 75.6 2.2 7.4E-05 36.9 3.7 25 8-32 4-28 (150)
113 2aa4_A Mannac kinase, putative 75.6 6.3 0.00022 37.5 7.6 46 423-468 234-287 (289)
114 3r6m_A YEAZ, resuscitation pro 75.5 4.7 0.00016 36.9 6.2 62 8-88 3-64 (213)
115 3cqy_A Anhydro-N-acetylmuramic 75.2 6.4 0.00022 39.1 7.5 82 4-89 2-100 (370)
116 4gni_A Putative heat shock pro 75.0 1.2 4.2E-05 45.1 2.3 24 5-29 11-34 (409)
117 3vgl_A Glucokinase; ROK family 74.1 8 0.00027 37.5 8.0 73 389-471 229-314 (321)
118 2qm1_A Glucokinase; alpha-beta 73.5 9.2 0.00032 36.9 8.3 72 388-469 238-321 (326)
119 3qfu_A 78 kDa glucose-regulate 73.2 1.4 4.9E-05 44.1 2.3 22 7-29 18-39 (394)
120 1hjr_A Holliday junction resol 71.4 14 0.00047 32.0 7.9 53 8-69 2-57 (158)
121 1nbw_A Glycerol dehydratase re 70.0 5.5 0.00019 41.7 5.7 75 374-453 505-582 (607)
122 4ijn_A Acetate kinase, acetoki 70.0 17 0.00059 36.3 9.2 48 389-445 299-347 (398)
123 2yhw_A Bifunctional UDP-N-acet 70.0 18 0.00061 35.3 9.5 69 390-470 262-339 (343)
124 1saz_A Probable butyrate kinas 69.0 11 0.00037 37.7 7.7 71 389-467 270-346 (381)
125 2fxu_A Alpha-actin-1, actin, a 68.3 3.2 0.00011 41.5 3.6 47 423-469 294-349 (375)
126 1sz2_A Glucokinase, glucose ki 68.3 16 0.00054 35.5 8.7 48 423-470 265-327 (332)
127 1yuw_A Heat shock cognate 71 k 67.1 2.7 9.1E-05 44.6 2.9 24 5-29 2-25 (554)
128 3o8m_A Hexokinase; rnaseh-like 66.8 11 0.00037 39.1 7.2 47 425-471 412-471 (485)
129 3aap_A Ectonucleoside triphosp 66.5 12 0.00043 36.9 7.5 20 7-26 3-22 (353)
130 4apw_A ALP12; actin-like prote 66.4 2.4 8.4E-05 41.6 2.3 24 1-24 1-24 (329)
131 3psf_A Transcription elongatio 65.9 6.8 0.00023 44.4 5.9 30 7-36 519-553 (1030)
132 2gel_A Putative GRAM negative 65.8 21 0.00073 32.8 8.5 62 8-88 2-63 (231)
133 3htv_A D-allose kinase, alloki 65.8 25 0.00086 33.8 9.5 48 423-470 240-300 (310)
134 3hi0_A Putative exopolyphospha 65.7 7.3 0.00025 40.7 5.8 77 7-90 15-97 (508)
135 2hoe_A N-acetylglucosamine kin 65.3 25 0.00085 34.9 9.6 73 388-470 290-372 (380)
136 2a6a_A Hypothetical protein TM 65.0 16 0.00055 33.4 7.4 63 7-88 12-74 (218)
137 1bdg_A Hexokinase; phosphotran 64.3 12 0.0004 38.5 7.0 75 387-471 365-448 (451)
138 1dkg_D Molecular chaperone DNA 61.9 2.6 8.9E-05 42.1 1.5 21 8-29 3-23 (383)
139 3qbx_A Anhydro-N-acetylmuramic 61.7 8.7 0.0003 38.1 5.2 77 7-89 2-96 (371)
140 2d0o_A DIOL dehydratase-reacti 60.4 14 0.00046 38.7 6.4 75 374-453 503-580 (610)
141 3zx3_A Ectonucleoside triphosp 59.0 4.1 0.00014 41.8 2.3 60 6-68 33-100 (452)
142 3psi_A Transcription elongatio 58.7 21 0.00072 41.2 8.3 30 7-36 516-550 (1219)
143 2iir_A Acetate kinase; transfe 58.0 9.3 0.00032 38.4 4.7 48 391-447 300-348 (403)
144 3i33_A Heat shock-related 70 k 57.4 4.2 0.00014 40.9 2.1 22 7-29 23-44 (404)
145 1zbs_A Hypothetical protein PG 57.4 18 0.00062 34.4 6.6 72 387-472 210-283 (291)
146 2ap1_A Putative regulator prot 56.8 18 0.00061 35.0 6.6 45 423-467 270-324 (327)
147 2zgy_A Plasmid segregation pro 56.3 6.5 0.00022 38.1 3.2 23 9-31 2-24 (320)
148 1z6r_A MLC protein; transcript 55.9 33 0.0011 34.3 8.6 68 390-467 312-391 (406)
149 4gib_A Beta-phosphoglucomutase 55.6 2.9 9.8E-05 38.8 0.5 22 10-31 9-38 (250)
150 2e1z_A Propionate kinase; TDCD 54.8 13 0.00044 37.5 5.1 48 391-447 308-356 (415)
151 1xho_A Chorismate mutase; sout 54.5 15 0.00053 30.9 4.7 37 49-89 43-79 (148)
152 4b9q_A Chaperone protein DNAK; 54.4 5.8 0.0002 42.5 2.7 19 7-25 2-20 (605)
153 1z05_A Transcriptional regulat 53.8 47 0.0016 33.4 9.4 47 423-470 358-416 (429)
154 3r9p_A ACKA; ssgcid, seattle s 52.8 23 0.0008 35.3 6.5 48 389-445 290-338 (391)
155 3epq_A Putative fructokinase; 52.0 30 0.001 33.1 7.2 48 423-470 225-290 (302)
156 2q2r_A Glucokinase 1, putative 51.6 36 0.0012 33.6 7.9 47 423-469 305-371 (373)
157 1dbf_A Protein (chorismate mut 48.6 19 0.00064 29.8 4.2 37 49-89 14-50 (127)
158 2v7y_A Chaperone protein DNAK; 48.4 8.5 0.00029 40.1 2.8 19 8-26 3-21 (509)
159 3js6_A Uncharacterized PARM pr 47.4 20 0.00068 35.4 5.2 45 423-470 291-337 (355)
160 1jce_A ROD shape-determining p 47.3 7.6 0.00026 38.0 2.1 20 8-28 4-23 (344)
161 2kho_A Heat shock protein 70; 47.2 7.5 0.00026 41.6 2.1 20 8-28 3-22 (605)
162 1nu0_A Hypothetical protein YQ 46.6 28 0.00094 29.3 5.2 24 7-30 3-26 (138)
163 1k8k_A ARP3, actin-like protei 46.5 7.3 0.00025 39.3 1.9 47 423-469 316-387 (418)
164 3d2f_A Heat shock protein homo 44.4 7.8 0.00027 42.0 1.7 18 9-26 4-21 (675)
165 1zc6_A Probable N-acetylglucos 44.4 18 0.0006 34.7 4.2 32 247-279 102-133 (305)
166 1iv0_A Hypothetical protein; r 44.1 24 0.00084 27.7 4.2 22 9-30 3-24 (98)
167 1ufy_A Chorismate mutase; shik 43.4 24 0.00084 28.8 4.1 37 49-89 13-50 (122)
168 3f9m_A Glucokinase; hexokinase 43.2 38 0.0013 34.8 6.6 48 425-472 410-463 (470)
169 2h3g_X Biosynthetic protein; p 43.1 73 0.0025 29.9 8.2 63 9-88 2-64 (268)
170 1woq_A Inorganic polyphosphate 40.4 35 0.0012 31.8 5.5 45 423-469 215-261 (267)
171 3khy_A Propionate kinase; csgi 39.5 32 0.0011 34.1 5.1 49 389-446 289-338 (384)
172 2iir_A Acetate kinase; transfe 39.3 23 0.0008 35.5 4.1 31 8-38 2-33 (403)
173 4h0p_A Acetate kinase; askha ( 39.2 31 0.0011 34.8 5.0 55 388-447 321-378 (438)
174 3mdq_A Exopolyphosphatase; str 38.4 17 0.00057 35.3 2.9 31 9-40 133-163 (315)
175 1zxo_A Conserved hypothetical 38.3 7.2 0.00025 37.3 0.2 41 423-467 233-276 (291)
176 2d0o_A DIOL dehydratase-reacti 37.3 10 0.00035 39.6 1.2 63 6-79 1-67 (610)
177 3hm8_A Hexokinase-3; glucose, 36.2 51 0.0018 33.5 6.2 47 425-471 386-438 (445)
178 3khy_A Propionate kinase; csgi 35.2 22 0.00077 35.3 3.2 30 8-37 3-33 (384)
179 4h0o_A Acetate kinase; askha ( 33.4 40 0.0014 33.6 4.7 51 387-446 300-351 (404)
180 1g99_A Acetate kinase; alpha/b 32.5 42 0.0014 33.7 4.7 48 391-447 300-348 (408)
181 2fsj_A Hypothetical protein TA 30.9 19 0.00064 35.3 1.9 23 7-31 21-43 (346)
182 1nbw_A Glycerol dehydratase re 30.8 10 0.00035 39.7 -0.0 54 6-63 1-57 (607)
183 2f9w_A Pantothenate kinase; CO 30.5 63 0.0021 30.5 5.4 34 5-38 21-54 (271)
184 2e1z_A Propionate kinase; TDCD 30.4 27 0.00093 35.1 3.0 38 1-38 12-50 (415)
185 1g99_A Acetate kinase; alpha/b 30.2 28 0.00096 34.9 3.0 31 8-38 2-33 (408)
186 2fp4_B Succinyl-COA ligase [GD 29.4 1.3E+02 0.0044 30.0 7.8 88 375-484 292-388 (395)
187 3cet_A Conserved archaeal prot 28.3 93 0.0032 30.2 6.3 30 9-39 2-31 (334)
188 2ov7_A 50S ribosomal protein L 27.2 88 0.003 26.2 5.1 80 17-98 56-135 (137)
189 3djc_A Type III pantothenate k 26.5 79 0.0027 29.6 5.4 63 8-88 3-65 (266)
190 3sk3_A Acetate kinase, acetoki 25.9 38 0.0013 34.1 3.1 36 1-36 12-49 (415)
191 1k8k_A ARP3, actin-like protei 23.8 26 0.00088 35.2 1.5 21 8-28 6-26 (418)
192 1k8k_B ARP2, actin-like protei 23.4 14 0.00049 36.9 -0.5 47 423-469 298-364 (394)
193 4am6_A Actin-like protein ARP8 23.0 31 0.0011 36.8 1.9 26 423-448 501-526 (655)
194 3bex_A Type III pantothenate k 22.3 95 0.0033 28.7 5.0 61 8-88 4-64 (249)
195 4gqc_A Thiol peroxidase, perox 21.2 70 0.0024 27.2 3.6 37 21-64 124-160 (164)
196 3cer_A Possible exopolyphospha 20.8 80 0.0027 30.8 4.3 88 9-97 148-242 (343)
No 1
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=3.9e-102 Score=836.14 Aligned_cols=494 Identities=48% Similarity=0.815 Sum_probs=451.0
Q ss_pred CceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEE
Q 009868 6 EVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIG 85 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIg 85 (523)
++|+||||+||||+|++|||.+|++++..+.+++..+|++||+||||++||+++++++++++++ .++++++ |.+||
T Consensus 3 kkYvlgID~GTss~Ka~l~d~~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~---~~~~~~~-I~aIg 78 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAK---ADISSDQ-IAAIG 78 (526)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---HTCCGGG-EEEEE
T ss_pred ceEEEEEEccccceeeeEEcCCCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHH---cCCChhh-EEEEE
Confidence 4799999999999999999999999999999999999999999999999999999999999987 5678889 99999
Q ss_pred EccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhcChHHHHHHh
Q 009868 86 LTNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMENVDAVKEAIK 165 (523)
Q Consensus 86 is~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~ 165 (523)
|++||+++++||+++|+||+|+|+|+|.|+.++++++.+. +..+.++++||+++++.++++||+|+++|+|+++++++
T Consensus 79 is~q~~~~v~~D~~~G~pl~~ai~W~D~R~~~~~~~l~~~--~~~~~i~~~tG~~~~~~~~~~kl~Wl~~~~p~~~~~~~ 156 (526)
T 3ezw_A 79 ITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRD--GLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERAR 156 (526)
T ss_dssp EEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHT--TCHHHHHHHHCCCSSTTSHHHHHHHHHHHSTTHHHHHH
T ss_pred EeCCCCCEEEEECCCCeEcccceecCCcchHHHHHHHHhh--ccHHHHHHHhCCCCCcccHHHHHHHHHHcCchHHHHHH
Confidence 9999999999998579999999999999999999999988 47788999999999999999999999999999999999
Q ss_pred cCCceeeChhHHHHHhhcCCCCCceeEeecchhcccccccCCCCCCCHHHHhhcCCCCCCCCCcccCCccccccccCC-C
Q 009868 166 KGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEILPKIVSNSEIIGKIGKGW-P 244 (523)
Q Consensus 166 ~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~~~-l 244 (523)
+..+.+..+++||.|+|||+. .+++|+|+||+|+|||+++++|++++++.+||+.++||+++++++++|+++... +
T Consensus 157 ~~~~~~~~i~~~L~~~Lt~g~---~~~td~s~As~t~l~d~~~~~w~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~~~ 233 (526)
T 3ezw_A 157 RGELLFGTVDTWLIWKMTQGR---VHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDGKG 233 (526)
T ss_dssp TTCEEEECHHHHHHHHHTTTS---CCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEEEECTTCTT
T ss_pred HhhhhccchhHHHhhhhcCCC---ceEEEchhhccccCcCccccCcCHHHHHHcCCCHHHCCCccccccccCccchhhhc
Confidence 888888999999999999742 688999999999999999999999999999999999999999999999998653 5
Q ss_pred CCCCcEEEeccchhhhhhcCCC-CCCCeEEEecCceeeeeecCccccccCCCceeeeeeecCCCCCceeEeccchhchhH
Q 009868 245 ITGIPISGCLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEEVVKSKHGLLSTLAFKLGPKAPTNYALEGSIAIAGA 323 (523)
Q Consensus 245 ~~g~pV~~g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 323 (523)
..|+||++|++|++|+++|+|+ ++|++++++|||+++.+++++.+..+..++.....+.. ..+..|.++|+++++|.
T Consensus 234 ~~gipV~~g~gD~~aa~~G~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~y~~eg~~~~~G~ 311 (526)
T 3ezw_A 234 GTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGP--TGEVNYALEGAVFMAGA 311 (526)
T ss_dssp SCCEEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEECT--TSCEEEEEEEEESCSHH
T ss_pred CCCCcEEEEcchHHHHhhhccccccceeEEEeccCeeEecccCCccccccccceeeeeecc--CCcceeeeHHHHHHHHH
Confidence 5789999999999999999999 99999999999999887776544544555554443322 24568999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHHHHhcCCCCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHhhhhhHHHHH
Q 009868 324 AVQWLRDSLGIISSASEIEELALQVNSTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLESMCFQVKDV 403 (523)
Q Consensus 324 ~l~w~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~rAv~Egia~~~r~~ 403 (523)
+++||++.++......+.+..+...++++|++|+|||+|+|+|+|||++||+|+||+..|+++||+||++|||||++|++
T Consensus 312 ~~~Wl~~~~~~~~~~~~~~~~~~~~~~~~gl~~lP~~~G~r~P~~d~~arG~~~Glt~~~~~~~i~RAvlEgia~~~r~~ 391 (526)
T 3ezw_A 312 SIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDV 391 (526)
T ss_dssp HHHHHHHTSCCCCSSSCHHHHHTTSSSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccchhHHHHHHhccCCCCCeEEeCCCCCCCCCCCCcccCeEEecCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999886544444555666668999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHHHHHHHHHHhccccCChhHHhcc
Q 009868 404 LDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFDSG 483 (523)
Q Consensus 404 l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~~~G~~~~~~~a~~~ 483 (523)
++.|++..|.+ +++|+++||++||++|+||+||+||+||++++..|++|+|||++|++|+|.|+|++++.+.
T Consensus 392 le~l~~~~g~~--------~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~~~~E~~alGAA~lA~~a~G~~~~~~e~~~~ 463 (526)
T 3ezw_A 392 LEAMQADSGIR--------LHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEK 463 (526)
T ss_dssp HHHHHHHHCCC--------CSEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCGGGSTTC
T ss_pred HHHHHHhcCCC--------CCEEEEECchhhCHHHHHHHHHHHCCEEEeCCCCchHHHHHHHHHHHHhCCCCCHHHHHHh
Confidence 99998877888 9999999999999999999999999999999999999999999999999999999998544
Q ss_pred cCCCCCcEEeCCCCHHHHHHHHHHHHHHHHHHhchhc
Q 009868 484 ERTKTSTTFKPVLNEEFRKKKAESWCRAVERTFNLAD 520 (523)
Q Consensus 484 ~~~~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~~ 520 (523)
+ +..++|+|+++++++|++|++|++++++.++|.+
T Consensus 464 ~--~~~~~~~P~~~~~~~~~~y~~w~~av~r~~~w~~ 498 (526)
T 3ezw_A 464 A--VIEREFRPGIETTERNYRYAGWKKAVKRAMAWEE 498 (526)
T ss_dssp C--CEEEEECCCSCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred c--CCCeEEcCCCCHHHHHHHHHHHHHHHHHHhCchH
Confidence 3 3678999999999999999999999999998843
No 2
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.4e-101 Score=827.94 Aligned_cols=495 Identities=47% Similarity=0.775 Sum_probs=448.3
Q ss_pred CcccCCceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccC
Q 009868 1 MAKAKEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSG 80 (523)
Q Consensus 1 m~~~~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 80 (523)
|.+||++|+||||+|||++|++|+|.+|+++++.+.+++..+|.+||+||||++||+++++++++++++ .++++.+
T Consensus 20 ~~~MM~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~---~~~~~~~- 95 (520)
T 4e1j_A 20 FQSMMGGYILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEK---SGITAND- 95 (520)
T ss_dssp CCCCCSCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT---TTCCGGG-
T ss_pred HHHHhhCeEEEEEeCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHh---cCCCccc-
Confidence 456777899999999999999999999999999999999899999999999999999999999999876 5666778
Q ss_pred ceEEEEccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhcChHH
Q 009868 81 LKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMENVDAV 160 (523)
Q Consensus 81 I~aIgis~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~ 160 (523)
|.+|||++|++++++||+++|+|++|+|.|+|.|+.++++++.+. +..++++++||+++++.++++||+|+++|+||+
T Consensus 96 I~~Igis~~g~~~v~~D~~~G~~l~~~i~W~D~R~~~~~~~l~~~--~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~Pe~ 173 (520)
T 4e1j_A 96 IAAIGITNQRETVVVWDRETGKPIHNAIVWQDRRTAAFCDKLKKK--GLEKTFVKKTGLLLDPYFSGTKLNWLLSNVKGA 173 (520)
T ss_dssp EEEEEEEECSSCEEEEETTTCCBSSCEECTTCCTTHHHHHHHHHT--TCHHHHHHHHSSCSSTTSHHHHHHHHHHHSTTH
T ss_pred EEEEEEeCCcceEEEEECCCCeECccccccccCCHHHHHHHHHhc--ccHHHHHHHHCCCCCchhHHHHHHHHHHcChHH
Confidence 999999999999999995489999999999999999999999987 367889999999999999999999999999999
Q ss_pred HHHHhcCCceeeChhHHHHHhhcCCCCCceeEeecchhcccccccCCCCCCCHHHHhhcCCCCCCCCCcccCCccccccc
Q 009868 161 KEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEILPKIVSNSEIIGKIG 240 (523)
Q Consensus 161 ~~~~~~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~ 240 (523)
|+++++++++|++++|||.|+|||+. .+++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|+++
T Consensus 174 ~~~~~~~~~~~~~~~dyl~~~LTG~~---~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~ 250 (520)
T 4e1j_A 174 QVRAAKGELCFGTIDTFLIWRLTGGE---CFCTDATNASRTLLYNIAENAWDDELTEVLRVPKEMLPEVKDCAADFGVTD 250 (520)
T ss_dssp HHHHHTTCEEEEEHHHHHHHHHTTTC---CCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGSCEEECSBSCCCBCC
T ss_pred HHHHhcCCeEecCHHHHHHHHhcCCC---eeeecHHHhhhhcccccccCCCCHHHHHHcCCCHHHCCceecCCCceeeeC
Confidence 99998777788899999999999931 389999999999999999999999999999999999999999999999997
Q ss_pred cCCCCCCCcEEEeccchhhhhhcCCC-CCCCeEEEecCceeeeeecCccccccCCCceeeeeeecCCCCCceeEeccchh
Q 009868 241 KGWPITGIPISGCLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEEVVKSKHGLLSTLAFKLGPKAPTNYALEGSIA 319 (523)
Q Consensus 241 ~~~l~~g~pV~~g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (523)
...|++|+||++|++|++|+++|+|+ ++|++++++|||+++.+++.++|..++.+++..++|..+ .++.|.++++++
T Consensus 251 ~~~l~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~ 328 (520)
T 4e1j_A 251 PSLFGAAIPILGVAGDQQAATIGQACFKPGMLKSTYGTGCFALLNTGKDMVRSKNRLLTTIAYRLD--GETTYALEGSIF 328 (520)
T ss_dssp HHHHTSCCBEEEECCHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTCCCCCSSSCEEEEEEEET--TEEEEEEEEEES
T ss_pred hhhCCCCCeEEEECCcHHHHHHhCCCCCCCcEEEEecCchheEEecCCccccCCCceeeEEeEecC--CCceEEEcchHh
Confidence 53267899999999999999999999 999999999999988777755666666787777777652 234799999999
Q ss_pred chhHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHhhhhhH
Q 009868 320 IAGAAVQWLRDSLGIISSASEIEELALQVNSTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLESMCFQ 399 (523)
Q Consensus 320 ~~G~~l~w~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~rAv~Egia~~ 399 (523)
++|.+++|+++.++...+|++++++++++|+++|++|+|||+|+|+|+|||++||+|+||+..|+++||+||++|||||+
T Consensus 329 ~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~lP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~ 408 (520)
T 4e1j_A 329 VAGAAVQWLRDGLKVIKAAPDTGSLAESADPSQEVYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPAEFARAALEAVCYQ 408 (520)
T ss_dssp CSHHHHHHHHHTTCCC-----CHHHHHTSCTTCCCEEECCTTCBCTTTCBTTCCCEEEEECTTCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCcccHHHHHHHHhcCCCCCcEEEEcCccCCCCCCCCCCCCEEEecccCCCCHHHHHHHHHHHHHHH
Confidence 99999999999988766788999999998999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh---hccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHHHHHHHHHHhccccCC
Q 009868 400 VKDVLDSMQKD---AVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAFAAGLAIGVFKE 476 (523)
Q Consensus 400 ~r~~l~~l~~~---~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~~~G~~~~ 476 (523)
+|++++.|++. .| + +++|+++||++||++|+||+||+||+||++++..|++|+|||++|++++|.|+|
T Consensus 409 ~r~~l~~l~~~~~~~g-~--------~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~~ 479 (520)
T 4e1j_A 409 TRDLLEAMHKDWRRNG-N--------DTVLRVDGGMVASDWTMQRLSDLLDAPVDRPVILETTALGVAWLAGSRAGVWPN 479 (520)
T ss_dssp HHHHHHHHHHHCC--------------CCEEEESGGGGCHHHHHHHHHHHTSCEEEESCCCHHHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHhhccCC-C--------cceEEEeCccccCHHHHHHHHHHhCCeEEecCCCccHHHHHHHHHHHHcCCcCC
Confidence 99999999875 46 7 899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhcccCCCCCcEEeCCCCHHHHHHHHHHHHHHHHHHhc
Q 009868 477 EEIFDSGERTKTSTTFKPVLNEEFRKKKAESWCRAVERTFN 517 (523)
Q Consensus 477 ~~~a~~~~~~~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~ 517 (523)
++++. +++ +..++|+|+++++++.++|++|+++++++++
T Consensus 480 ~~~~~-~~~-~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~ 518 (520)
T 4e1j_A 480 QEAFA-KSW-ARDRRFEPHMDEATRKVKLKGWRSAVKRTLI 518 (520)
T ss_dssp HHHHH-HTC-CEEEEECCCSCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHH-hhc-CCCeEECCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 99984 554 5678999999988877899999999999874
No 3
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=1.1e-100 Score=821.30 Aligned_cols=494 Identities=48% Similarity=0.815 Sum_probs=455.2
Q ss_pred CceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEE
Q 009868 6 EVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIG 85 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIg 85 (523)
++|+||||+|||++|++|+|.+|+++++.+.+++..+|++||+||||++||+++++++++++++ .++++.+ |.+||
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~---~~~~~~~-I~~Ig 77 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAK---ADISSDQ-IAAIG 77 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGG-EEEEE
T ss_pred CcEEEEEEcCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHH---cCCChhh-eEEEE
Confidence 4589999999999999999999999999999999999999999999999999999999999887 5667788 99999
Q ss_pred EccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhcChHHHHHHh
Q 009868 86 LTNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMENVDAVKEAIK 165 (523)
Q Consensus 86 is~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~ 165 (523)
|++||+++++||+++|+|++|+|+|+|.|+.++++++.+. .+.++++++||+++++.++++||+|+++|+||+|++++
T Consensus 78 is~~~~~~v~~D~~~G~~l~~~i~W~D~R~~~~~~~l~~~--~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~ 155 (510)
T 2p3r_A 78 ITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRD--GLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERAR 155 (510)
T ss_dssp EEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHT--TCHHHHHHHHCCCSSTTSHHHHHHHHHHHSTTHHHHHH
T ss_pred EeCCcCcEEEEECCCCeECcccccccCccHHHHHHHHHhc--ccHHHHHHHhCCCCCcccHHHHHHHHHHcCHHHHHHHh
Confidence 9999999999998459999999999999999999999987 36788999999999999999999999999999999999
Q ss_pred cCCceeeChhHHHHHhhcCCCCCceeEeecchhcccccccCCCCCCCHHHHhhcCCCCCCCCCcccCCccccccccCCC-
Q 009868 166 KGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEILPKIVSNSEIIGKIGKGWP- 244 (523)
Q Consensus 166 ~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~~~l- 244 (523)
++.++|++++|||.|+|||+. ++++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|+++...+
T Consensus 156 ~~~~l~~~~~dyl~~~LTG~~---~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~lG 232 (510)
T 2p3r_A 156 RGELLFGTVDTWLIWKMTQGR---VHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDGKG 232 (510)
T ss_dssp TTCEEEECHHHHHHHHHTTTS---CCEEEHHHHHTTSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEEEECTTCTT
T ss_pred cCCeEecCHHHHHHHHhcCCC---eEEeehhHhhhhccccCccCCCCHHHHHHhCCCHHHCCceecCCCceeeechhhcC
Confidence 777889999999999999942 5899999999999999999999999999999999999999999999999976435
Q ss_pred CCCCcEEEeccchhhhhhcCCC-CCCCeEEEecCceeeeeecCccccccCCCceeeeeeecCCCCCceeEeccchhchhH
Q 009868 245 ITGIPISGCLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEEVVKSKHGLLSTLAFKLGPKAPTNYALEGSIAIAGA 323 (523)
Q Consensus 245 ~~g~pV~~g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 323 (523)
++|+||++|++|++|+++|+|+ ++|++++++|||+++.+++.++|+.++.+++..++|.++ .++.|.++++++++|.
T Consensus 233 ~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~G~ 310 (510)
T 2p3r_A 233 GTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPT--GEVNYALEGAVFMAGA 310 (510)
T ss_dssp SCCEEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTCCCCCSSSCEEEEEECTT--SCEEEEEEEEESCSHH
T ss_pred CCCCeEEEECchHHHHHHhcCCCCCCcEEEeecchheeEEecCCccccCCCCeeEEEeeecC--CCceEEEccchhhHHH
Confidence 7899999999999999999999 999999999999987777766677667787777777542 2468999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHHHHhcCCCCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHhhhhhHHHHH
Q 009868 324 AVQWLRDSLGIISSASEIEELALQVNSTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLESMCFQVKDV 403 (523)
Q Consensus 324 ~l~w~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~rAv~Egia~~~r~~ 403 (523)
+++|+++.++...+|++++++++++|+++|++|+|||.|+|+|+||+++||+|+|++..|+++||+||++|||||++|++
T Consensus 311 ~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~ 390 (510)
T 2p3r_A 311 SIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDV 390 (510)
T ss_dssp HHHHHHHTSCCCCSSSCHHHHHTTSSSCTTCEEECCTTCCBTTTCCTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCCcHHHHHHHHhhCCCCCceEEeCcccCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999887667889999998888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHHHHHHHHHHhccccCChhHHhcc
Q 009868 404 LDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFDSG 483 (523)
Q Consensus 404 l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~~~G~~~~~~~a~~~ 483 (523)
++.|++..|.+ +++|+++||++||++|+||+||++|+||+++...|++|+|||++|++++|.|+|++++ ++
T Consensus 391 ~~~l~~~~g~~--------~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~ 461 (510)
T 2p3r_A 391 LEAMQADSGIR--------LHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDEL-QE 461 (510)
T ss_dssp HHHHHHHHCCC--------CSEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHHTSSSCGGGG-TT
T ss_pred HHHHHHhcCCC--------ccEEEEeCchhcCHHHHHHHHHHhCCceEecCCCCcHHHHHHHHHHHHhCccCCHHHH-HH
Confidence 99998866888 8999999999999999999999999999999999999999999999999999999987 56
Q ss_pred cCCCCCcEEeCCCCHHHHHHHHHHHHHHHHHHhchhc
Q 009868 484 ERTKTSTTFKPVLNEEFRKKKAESWCRAVERTFNLAD 520 (523)
Q Consensus 484 ~~~~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~~ 520 (523)
++ +..++|+|+++...+.++|++|+++++++++|.+
T Consensus 462 ~~-~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~~ 497 (510)
T 2p3r_A 462 KA-VIEREFRPGIETTERNYRYAGWKKAVKRAMAWEE 497 (510)
T ss_dssp CC-CEEEEECCCSCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred hc-CCCeEECCCCCHHHHHHHHHHHHHHHHHHhhhhc
Confidence 55 5678999998865666899999999999999843
No 4
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=100.00 E-value=1.5e-100 Score=819.71 Aligned_cols=496 Identities=47% Similarity=0.824 Sum_probs=455.3
Q ss_pred ccCCceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCce
Q 009868 3 KAKEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLK 82 (523)
Q Consensus 3 ~~~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~ 82 (523)
|.|++|+||||+|||++|++|+|.+|+++++.+.+++..+|.+||+||||++||+++++++++++++ .++++++ |.
T Consensus 2 ~aM~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~---~~~~~~~-I~ 77 (501)
T 3g25_A 2 NAMEKYILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINE---NDVRADQ-IA 77 (501)
T ss_dssp -CCCCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT---TTCCGGG-EE
T ss_pred cccccEEEEEEeCccceEEEEEcCCCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHh---cCCCccc-EE
Confidence 4456799999999999999999999999999999999999999999999999999999999999876 5667788 99
Q ss_pred EEEEccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhcChHHHH
Q 009868 83 AIGLTNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMENVDAVKE 162 (523)
Q Consensus 83 aIgis~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~ 162 (523)
+|||++|++++++||+++|+|++|+|+|+|.|+.++++++.+. +..++++++||+++++.++++||+|+++|+||+|+
T Consensus 78 ~Igis~~~~~~v~~D~~~G~~l~~~i~w~D~R~~~~~~~l~~~--~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~ 155 (501)
T 3g25_A 78 GIGITNQRETTVVWDKHTGRPIYHAIVWQSRQTQSICSELKQQ--GYEQTFRDKTGLLLDPYFAGTKVKWILDNVEGARE 155 (501)
T ss_dssp EEEEEECSSCEEEEETTTCCBSSCEECTTCCTTHHHHHHHHHT--TCHHHHHHHHSCCSSTTSHHHHHHHHHHHSTTHHH
T ss_pred EEEEECCcCcEEEEECCCCeECCCceeeccCChHHHHHHHHhc--cCHHHHHHHHCCCCCchhHHHHHHHHHHhCHHHHH
Confidence 9999999999999999449999999999999999999999987 36788999999999999999999999999999999
Q ss_pred HHhcCCceeeChhHHHHHhhcCCCCCceeEeecchhcccccccCCCCCCCHHHHhhcCCCCCCCCCcccCCccccccccC
Q 009868 163 AIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEILPKIVSNSEIIGKIGKG 242 (523)
Q Consensus 163 ~~~~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~~ 242 (523)
+++++.++|++++|||.|+|||+. ++++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|+++..
T Consensus 156 ~~~~~~~l~~~~~dyl~~~LTG~~---~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~ 232 (501)
T 3g25_A 156 KAENGDLLFGTIDTWLVWKLSGKA---AHITDYSNASRTLMFNIHDLEWDDELLELLTVPKNMLPEVKASSEVYGKTIDY 232 (501)
T ss_dssp HHHTTCEEEEEHHHHHHHHHTTTS---CCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEEECCGG
T ss_pred HHhcCCeEEecHHHHHHHHhcCCC---eeeeeHHHhhcccCeeCCCCCCCHHHHHHhCcCHHHCCceecCCCceeccchH
Confidence 999877889999999999999941 58899999999999999999999999999999999999999999999999753
Q ss_pred C-CCCCCcEEEeccchhhhhhcCCC-CCCCeEEEecCceeeeeecCccccccCCCceeeeeeecCCCCCceeEeccchhc
Q 009868 243 W-PITGIPISGCLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEEVVKSKHGLLSTLAFKLGPKAPTNYALEGSIAI 320 (523)
Q Consensus 243 ~-l~~g~pV~~g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (523)
. +.+|+||++|++|++|+++|+|+ ++|++++++|||+++.+++++.|..++.+++..++|.++ .+..|.+++++++
T Consensus 233 ~~~g~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~ 310 (501)
T 3g25_A 233 HFYGQEVPIAGVAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTGDKAVKSESGLLTTIAYGID--GKVNYALEGSIFV 310 (501)
T ss_dssp GTTTCCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEEEET--TEEEEEEEEEESC
T ss_pred HhCCCCCeEEEECccHHHHHHhCCCCCCCcEEEEccchhheeeecCCccccCCCCeEEEeeEecC--CccEEEEeccccc
Confidence 2 45799999999999999999999 999999999999988777765666666777777777642 1237999999999
Q ss_pred hhHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHhhhhhHH
Q 009868 321 AGAAVQWLRDSLGIISSASEIEELALQVNSTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLESMCFQV 400 (523)
Q Consensus 321 ~G~~l~w~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~rAv~Egia~~~ 400 (523)
+|.+++|+++.++...+|++++++++++|..++++|+|||.|+|+|+|||++||+|+||+..|+++||+||++|||||++
T Consensus 311 ~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~ 390 (501)
T 3g25_A 311 SGSAIQWLRDGLRMINSAPQSESYATRVDSTEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFIRATLESLCYQT 390 (501)
T ss_dssp STHHHHHHHHTSCCCSSGGGHHHHHTTSSCCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHhhCCCCCeEEEecccccCCCCCCCCCCCEEEEccCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999876667999999998887779999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHHHHHHHHHHhccccCChhHH
Q 009868 401 KDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIF 480 (523)
Q Consensus 401 r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~~~G~~~~~~~a 480 (523)
|++++.|++..|.+ +++|+++||++||++|+|++||++|+||++++..|++|+|||++|++++|.|+|++++
T Consensus 391 ~~~~~~l~~~~g~~--------~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~la~~a~G~~~~~~~~ 462 (501)
T 3g25_A 391 RDVMEAMSKDSGID--------VQSLRVDGGAVKNNFIMQFQADIVNTSVERPEIQETTALGAAFLAGLAVGFWESKDDI 462 (501)
T ss_dssp HHHHHHHHHHSSCC--------CSEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCTHHH
T ss_pred HHHHHHHHHhcCCC--------CcEEEEecchhcCHHHHHHHHHHhCCceEecCCCcchHHHHHHHHHHHhCccCCHHHH
Confidence 99999998766887 8999999999999999999999999999999999999999999999999999999987
Q ss_pred hcccCCCCCcEEeCCCCHHHHHHHHHHHHHHHHHHhchh
Q 009868 481 DSGERTKTSTTFKPVLNEEFRKKKAESWCRAVERTFNLA 519 (523)
Q Consensus 481 ~~~~~~~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~ 519 (523)
++++ +..++|+|+++.+++.++|++|+++++++++|.
T Consensus 463 -~~~~-~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~ 499 (501)
T 3g25_A 463 -AKNW-KLEEKFDPKMDEGEREKLYRGWKKAVEATQVFK 499 (501)
T ss_dssp -HHHC-CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred -HHhc-cCCeEECCCCCHHHHHHHHHHHHHHHHHHhccc
Confidence 5554 567899999998877789999999999999884
No 5
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=100.00 E-value=2.3e-100 Score=818.75 Aligned_cols=492 Identities=47% Similarity=0.791 Sum_probs=453.3
Q ss_pred CceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEE
Q 009868 6 EVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIG 85 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIg 85 (523)
++|+||||+|||++|++|+|.+|+++++.+.+++..+|.+||+||||++||+++++++++++++ .++++.+ |.+||
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~---~~~~~~~-I~~Ig 79 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIE---SGIRPEA-IAGIG 79 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---HTCCGGG-EEEEE
T ss_pred CCEEEEEEcCCCceEEEEECCCCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHH---cCCChhh-eEEEE
Confidence 3589999999999999999999999999999999999999999999999999999999999887 4566778 99999
Q ss_pred EccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhcChHHHHHHh
Q 009868 86 LTNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMENVDAVKEAIK 165 (523)
Q Consensus 86 is~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~ 165 (523)
|++|++++++||+++|+|++|+|+|+|.|+.++++++.+. +..++++++||+++++.++++||+|+++|+||+|++++
T Consensus 80 is~~~~~~v~~D~~~G~~l~~~i~w~D~R~~~~~~~l~~~--~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~ 157 (506)
T 3h3n_X 80 ITNQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQLKVD--GHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKAD 157 (506)
T ss_dssp EEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHT--TCHHHHHHHHSCCCCTTSHHHHHHHHHHHSTTHHHHHH
T ss_pred eeCCcccEEEEeCCCCeECCCceEecCcchHHHHHHHHhc--cCHHHHHHHhCCCCCchhHHHHHHHHHHhCHHHHHHHh
Confidence 9999999999998449999999999999999999999987 36788999999999999999999999999999999999
Q ss_pred cCCceeeChhHHHHHhhcCCCCCceeEeecchhcccccccCCCCCCCHHHHhhcCCCCCCCCCcccCCccccccccCC-C
Q 009868 166 KGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEILPKIVSNSEIIGKIGKGW-P 244 (523)
Q Consensus 166 ~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~~~-l 244 (523)
+++++|++++|||.|+|||+. ++++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|+++..+ +
T Consensus 158 ~~~~~~~~~~dyl~~~LTG~~---~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~~l 234 (506)
T 3h3n_X 158 NGELLFGTIDSWLVWKLTDGQ---VHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSSMLPEVKSNSEVYGHTRSYRFY 234 (506)
T ss_dssp TTCEEEECHHHHHHHHHTTTS---CCEEEHHHHHTTTSEETTTTEECHHHHHHTTCCGGGCCEEECSEEEEEECCGGGTT
T ss_pred cCCeEEecHHHHHHHHhcCCc---eeeeEHHHhhhhhCeecCCCCcCHHHHHHcCcCHHHCCceecCCCcceeeChHHhc
Confidence 877889999999999999941 479999999999999999999999999999999999999999999999998653 4
Q ss_pred CCCCcEEEeccchhhhhhcCCC-CCCCeEEEecCceeeeeecCccccccCCCceeeeeeecCCCCCceeEeccchhchhH
Q 009868 245 ITGIPISGCLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEEVVKSKHGLLSTLAFKLGPKAPTNYALEGSIAIAGA 323 (523)
Q Consensus 245 ~~g~pV~~g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 323 (523)
.+|+||++|++|++|+++|+|+ ++|++++++|||+++.+++++.|+.++.+++..++|.++ .+..|.++++++++|.
T Consensus 235 g~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~g~~~~~G~ 312 (506)
T 3h3n_X 235 GSEVPIAGMAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTGEEPQLSDNDLLTTIGYGIN--GKVYYALEGSIFVAGS 312 (506)
T ss_dssp TCCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEETCCCSCCTTSEEEEEEEET--TEEEEEEEEEECCSSH
T ss_pred CCCCeEEEECCcHHHHHHhCCCCCCCcEEEEecchheeeeecCCccccCCCceEEEeeeecC--CCCEEEEecchhhHHH
Confidence 4799999999999999999999 999999999999987777655566666777777777652 1347999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHHHHhcCCCCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHhhhhhHHHHH
Q 009868 324 AVQWLRDSLGIISSASEIEELALQVNSTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLESMCFQVKDV 403 (523)
Q Consensus 324 ~l~w~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~rAv~Egia~~~r~~ 403 (523)
+++|+++.++...+|++++++++++|..+|++|+|||+|+|+|+|||++||+|+|++..|+++||+||++|||||++|++
T Consensus 313 ~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~ 392 (506)
T 3h3n_X 313 AIQWLRDGLRMIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFVRATLQAVAYQSKDV 392 (506)
T ss_dssp HHHHHHHTSCCCSSTTHHHHHHTTCCSCSCCEEECCTTCBCTTTCBTTCCCEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcHHHHHHHHhcCCCCCceEEeccccCCCCCccCCCCCEEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999887667899999998887779999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHHHHHHHHHHhccccCChhHHhcc
Q 009868 404 LDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFDSG 483 (523)
Q Consensus 404 l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~~~G~~~~~~~a~~~ 483 (523)
++.|++..|.+ +++|+++||++||++|+||+||++|+||+++...|++|+|||++|++++|.|+|++++ .+
T Consensus 393 ~~~l~~~~g~~--------~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~ 463 (506)
T 3h3n_X 393 IDTMKKDSGID--------IPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDEL-KS 463 (506)
T ss_dssp HHHHHHHHCSC--------CCEEEEESGGGGCHHHHHHHHHHHTSEEEECSSSCHHHHHHHHHHHHHTTSSCSHHHH-HT
T ss_pred HHHHHHhcCCC--------CCEEEEecccccCHHHHHHHHHHhCCeEEecCCCcchhHHHHHHHHHHhCccCCHHHH-HH
Confidence 99998766887 8999999999999999999999999999999999999999999999999999999998 55
Q ss_pred cCCCCCcEEeCCCCHHHHHHHHHHHHHHHHHHhch
Q 009868 484 ERTKTSTTFKPVLNEEFRKKKAESWCRAVERTFNL 518 (523)
Q Consensus 484 ~~~~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~ 518 (523)
++ +..++|+|+++.+++.++|++|+++++++++|
T Consensus 464 ~~-~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~ 497 (506)
T 3h3n_X 464 MA-EEGQMFTPEMPAEERDNLYEGWKQAVAATQTF 497 (506)
T ss_dssp TC-CCCCEECCCSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred hc-CCCeEECCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 54 57889999999877778999999999999988
No 6
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=100.00 E-value=1.3e-99 Score=812.67 Aligned_cols=483 Identities=22% Similarity=0.281 Sum_probs=435.2
Q ss_pred CcccCCceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccC
Q 009868 1 MAKAKEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSG 80 (523)
Q Consensus 1 m~~~~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 80 (523)
|..+.++|+||||+|||++|++|+|.+|+++++.+.+++..+|.+||+||||++||+++++++++++++ .++++.+
T Consensus 1 ~~~~~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~---~~~~~~~- 76 (508)
T 3ifr_A 1 MSLAQGRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTT---AGESDWR- 76 (508)
T ss_dssp ------CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---HCGGGCC-
T ss_pred CCcccCCEEEEEEecCcceEEEEECCCCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHh---cCCChhh-
Confidence 666667899999999999999999999999999999999999999999999999999999999999876 3555678
Q ss_pred ceEEEEccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhcChHH
Q 009868 81 LKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMENVDAV 160 (523)
Q Consensus 81 I~aIgis~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~ 160 (523)
|.+|||++|++++++||+ +|+|++|+|+|+|.|+.++++++.+.. +.++++++||+++++.++++||+|+++|+||+
T Consensus 77 I~~Igis~~~~~~v~~D~-~G~~l~~~i~W~D~R~~~~~~~l~~~~--~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~ 153 (508)
T 3ifr_A 77 PGGICVTGMLPAVVLLDD-RGAVLRPSIQQSDGRCGDEVAELRAEV--DSEAFLARTGNGVTQQLVTAKLRWIERHEPAV 153 (508)
T ss_dssp EEEEEEEECSSCBEEECT-TSCBCSCEECTTCCCCHHHHHHHHHHS--CHHHHHHHHSSCSSTTSHHHHHHHHHHHCHHH
T ss_pred eEEEEEECCCCcEEEECC-CCCCcccceeccccChHHHHHHHHhhc--cHHHHHHHHCCCCChhhHHHHHHHHHHcCHHH
Confidence 999999999999999998 799999999999999999999999985 67789999999999999999999999999999
Q ss_pred HHHHhcCCceeeChhHHHHHhhcCCCCCceeEeecchhcccccccCCCCCCCHHHHhhcCCCCCCCCCcccCCccccccc
Q 009868 161 KEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEILPKIVSNSEIIGKIG 240 (523)
Q Consensus 161 ~~~~~~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~ 240 (523)
|+++++ |+.++|||.|+||| ++++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|+++
T Consensus 154 ~~~~~~----~l~~~dyl~~~LTG-----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~l~ 224 (508)
T 3ifr_A 154 FGAIAT----VCGSYDYINMLLTG-----ERVVDRNWALEGGFIDLASGTVEADLVALAHIPPSAVPPAHPTHRVLGAVT 224 (508)
T ss_dssp HHTCSE----EECHHHHHHHHHHC-----CCCEEHHHHHHHTCEETTTTEECHHHHHTTTSCGGGSCCEECTTSEEEECC
T ss_pred HHHHhh----hcCchHHHHHHhcC-----CccccHhHhhcccCccCccCCCCHHHHHHcCCCHHHCCCCcCCCCeeeccC
Confidence 999875 88899999999999 889999999999999999999999999999999999999999999999997
Q ss_pred c------CCCCCCCcEEEeccchhhhhhcCCC-CCCCeEEEecCceeeeeecCccccccCCCceeeeeeecCCCCCceeE
Q 009868 241 K------GWPITGIPISGCLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEEVVKSKHGLLSTLAFKLGPKAPTNYA 313 (523)
Q Consensus 241 ~------~~l~~g~pV~~g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (523)
. | |++|+||++|++|++|+++|+|+ ++|++++++|||+++.++++ +|..++. +..+++. .|+.|.
T Consensus 225 ~~~a~~~G-l~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~~~~~--~~~~~~~----~~g~~~ 296 (508)
T 3ifr_A 225 AEAAALTG-LPTGLPVYGGAADHIASALAAGITRPGDVLLKFGGAGDIIVASA-TAKSDPR--LYLDYHL----VPGLYA 296 (508)
T ss_dssp HHHHHHHC-CCTTCEEECCEEHHHHHHHHTTCCSTTEEEEEESSSEEEEECBS-CCCCBTT--BBCCBCS----STTCBC
T ss_pred HHHHHHhC-CCCCCeEEEECchHHHHHHhCCCCCCCcEEEEechhhhheeeCC-CcccCCC--cceeeee----cCCceE
Confidence 4 6 88999999999999999999999 99999999999999877665 4555543 3344432 478899
Q ss_pred eccchhchhHHHHHHHHHcCCC-C--CHHHHHHHHHhc-CCCCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHH
Q 009868 314 LEGSIAIAGAAVQWLRDSLGII-S--SASEIEELALQV-NSTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIA 389 (523)
Q Consensus 314 ~~~~~~~~G~~l~w~~~~~~~~-~--~~~~l~~~a~~~-~~~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~ 389 (523)
++++++++|.+++|+++.+... . +|+++++++++. ++++|++|+|||+|+|+|+|||++||+|+|++..|+++||+
T Consensus 297 ~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~l~~~a~~~~~~~~gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~ 376 (508)
T 3ifr_A 297 PNGCMAATGSALNWLAKLLAPEAGEAAHAQLDALAAEVPAGADGLVCLPYFLGEKTPIHDPFASGTFTGLSLSHTRGHLW 376 (508)
T ss_dssp CEEEESSSHHHHHHHHHHHSTTCTTHHHHHHHHHHHTSCTTGGGCEEECCTTCCC----CCCCCCEEESCCTTCCHHHHH
T ss_pred EechhhhhHHHHHHHHHHHhhcCCCCCHHHHHHHHhcCCCCCCCeEEecCCCCCCCCCCCCCcCEEEECCCCCCCHHHHH
Confidence 9999999999999999988421 2 589999998876 58999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHHHHHHHHHH
Q 009868 390 RAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAFAAGL 469 (523)
Q Consensus 390 rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~ 469 (523)
||++|||||++|++++.|++ .|.+ +++|+++||++||++|+|++||++|+||++++..|++|+|||++|++
T Consensus 377 rAvlEgia~~~~~~~~~l~~-~g~~--------~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~ 447 (508)
T 3ifr_A 377 RALLEAVALAFRHHVAVLDD-IGHA--------PQRFFASDGGTRSRVWMGIMADVLQRPVQLLANPLGSAVGAAWVAAI 447 (508)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HTCC--------CCEEEEESGGGGCHHHHHHHHHHHTSCEEEEECCSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCC--------CCEEEEeCCcccCHHHHHHHHHHhCCeEEecCCCCchHHHHHHHHHH
Confidence 99999999999999999986 4877 89999999999999999999999999999999899999999999999
Q ss_pred hccccCChhHHhcccCCCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHhch
Q 009868 470 AIGVFKEEEIFDSGERTKTSTTFKPVLNEEFRK-KKAESWCRAVERTFNL 518 (523)
Q Consensus 470 ~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~~~~~ 518 (523)
++|.|+|++++ .+++ +..++|+|++++++.| ++|++|++++++++..
T Consensus 448 a~G~~~~~~~~-~~~~-~~~~~~~P~~~~~~~y~~~y~~~~~~~~~~~~~ 495 (508)
T 3ifr_A 448 GGGDDLGWDDV-TALV-RTGEKITPDPAKAEVYDRLYRDFSALYATLHPF 495 (508)
T ss_dssp HTCSSCCGGGG-GGGS-EEEEEECCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCHHHH-Hhhc-CCCeEECcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988 4555 5778999999988776 6799999999998864
No 7
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=100.00 E-value=7.1e-99 Score=806.29 Aligned_cols=477 Identities=23% Similarity=0.366 Sum_probs=436.0
Q ss_pred CCceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEE
Q 009868 5 KEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAI 84 (523)
Q Consensus 5 ~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aI 84 (523)
+++|+||||+|||++|++|+|.+|+++++.+.+++..+|.+||+||||++||+++++++++++++ .+ .+ |.+|
T Consensus 2 ~m~~~lgIDiGtts~K~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~---~~---~~-I~~I 74 (504)
T 3ll3_A 2 SLKYIIGMDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQK---ID---GK-IAAI 74 (504)
T ss_dssp CCEEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT---CS---SE-EEEE
T ss_pred CCCEEEEEEecCCceEEEEEcCCCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHh---CC---CC-eEEE
Confidence 45699999999999999999999999999999999999999999999999999999999999876 22 57 9999
Q ss_pred EEccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhcChHHHHHH
Q 009868 85 GLTNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMENVDAVKEAI 164 (523)
Q Consensus 85 gis~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~ 164 (523)
||++||+++++||+ +|+||+|+|+|+|.|+.++++++.+.. +.++++++||+++++.++++||+|+++|+||+|+++
T Consensus 75 gis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~--~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~ 151 (504)
T 3ll3_A 75 SWSSQMHSLIGLGS-DDELLTNSITWADNCAKSIVQDAKNRG--FAQQIYRKTGMPMHPMAPIYKLLWLKNKKTEVFSQA 151 (504)
T ss_dssp EEEECSSCBEEECT-TSCBSSCEECTTCCTTHHHHHHHHHHT--HHHHHHHHHCCCSCTTSHHHHHHHHHHHCHHHHHHC
T ss_pred EEECCCCcEEEECC-CCCCcccceeCCccCHHHHHHHHHhcc--CHHHHHHHHCCCCCcccHHHHHHHHHHcChHHHHHH
Confidence 99999999999998 899999999999999999999999884 568899999999999999999999999999999998
Q ss_pred hcCCceeeChhHHHHHhhcCCCCCceeEeecchhcccccccCCCCCCCHHHHhhcCCCCCCCCCcccCCcccccccc---
Q 009868 165 KKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEILPKIVSNSEIIGKIGK--- 241 (523)
Q Consensus 165 ~~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~--- 241 (523)
++ |++++|||.|+||| ++++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|+++.
T Consensus 152 ~~----~~~~~dyl~~~LTG-----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~l~~~~a 222 (504)
T 3ll3_A 152 QK----WIGIKEYIIFRLTG-----KLVTDTTMAAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFPIKTEYV 222 (504)
T ss_dssp CE----EECHHHHHHHHHHS-----CCEEEHHHHTTTTCBCTTTSSBCHHHHHHHTCCGGGSCEEECTTCEECCCCHHHH
T ss_pred hh----eeCHHHHHHHHHhC-----CcccchhHhhcccCeeCCCCCcCHHHHHHcCCCHHHCCCeeCCcceeeccCHHHH
Confidence 75 99999999999999 8999999999999999999999999999999999999999999999999974
Q ss_pred ---CCCCCCCcEEEeccchhhhhhcCCC-CCCCeEEEecCceeeeeecCccccccCCCceeeeeeecCCCCCceeEeccc
Q 009868 242 ---GWPITGIPISGCLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEEVVKSKHGLLSTLAFKLGPKAPTNYALEGS 317 (523)
Q Consensus 242 ---~~l~~g~pV~~g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (523)
| |++|+||++|++|++|+++|+|+ ++|++++++|||+++.++++ +|..++.+.+ ++|.+ .++.|.++++
T Consensus 223 ~~~G-l~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~~~~~~~~--~~~~~---~~~~~~~~g~ 295 (504)
T 3ll3_A 223 KKLG-IDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVD-QPKIDPSASY--FCYPA---DKTHYLLGGP 295 (504)
T ss_dssp HHHT-CCTTCEEEEEEEHHHHHHHTTTCCSTTEEEEEESSSEEEEEEES-SCCCCTTCCS--EEEEE---ETTEEEEEEE
T ss_pred HhcC-CCcCCCEEEEccHHHHHHHhCCCCCCCcEEEEechhhhheeeCC-CcccCCCCce--EEEEe---CCCeEEEEee
Confidence 5 88999999999999999999999 99999999999999877764 5666655554 44543 2568999999
Q ss_pred hhchhHHHHHHHHHcCCC-CCHHHHHHHHHhcC-CCCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHhh
Q 009868 318 IAIAGAAVQWLRDSLGII-SSASEIEELALQVN-STGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLES 395 (523)
Q Consensus 318 ~~~~G~~l~w~~~~~~~~-~~~~~l~~~a~~~~-~~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~rAv~Eg 395 (523)
++++|.+++|+++.++.. ..++++.++++++| +++|++|+|||+|+|+|+|||++||+|+||+..|+++||+||++||
T Consensus 296 ~~~~G~~~~W~~~~~~~~~~~~~~~~~~a~~~~~g~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEg 375 (504)
T 3ll3_A 296 VNNGGIVFNWARQTLFDADETPQDFLDVAQTAPAGSRNLIFLPYLGGERAPIWDANARGSFVGLTRMHQKPEMARAVIEG 375 (504)
T ss_dssp ESCSHHHHHHHHHHHTCTTCCHHHHHHHHHTSCTTGGGCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhccchhHHHHHHHHHhcCCCCCCCeEEecCccCCCCCCCCCccCeEEECCCCCCCHHHHHHHHHHH
Confidence 999999999999988643 23455555777774 7899999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHHHHHHHHHHhccccC
Q 009868 396 MCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAFAAGLAIGVFK 475 (523)
Q Consensus 396 ia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~~~G~~~ 475 (523)
|||++|++++.|++. +.+ +++|+++||++||++|+||+||++|+||++++..|++|+|||++|++++|.|+
T Consensus 376 ia~~~r~~~~~l~~~-g~~--------~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~ 446 (504)
T 3ll3_A 376 IIFNLYDAASNLIKN-TKK--------PVAINATGGFLKSDFVRQLCANIFNVPIVTMKEQQSGTLAAMFLARQALGLNQ 446 (504)
T ss_dssp HHHHHHHHHHHHHTT-SCC--------CSEEEEESGGGCSHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHc-CCC--------CCEEEEeCchhcCHHHHHHHHHhhCCeEEecCCCCchhHHHHHHHHHHcCccC
Confidence 999999999999874 666 89999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHhcccCCCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHhch
Q 009868 476 EEEIFDSGERTKTSTTFKPVLNEEFRK-KKAESWCRAVERTFNL 518 (523)
Q Consensus 476 ~~~~a~~~~~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~~~~~ 518 (523)
|++++ ++++ +..++|+|++++++.| ++|++|+++|++++++
T Consensus 447 ~~~~~-~~~~-~~~~~~~P~~~~~~~Y~~~y~~y~~l~~~l~~~ 488 (504)
T 3ll3_A 447 DLSEI-GQFA-QADKVYFPNPKEAATYQKLFPLYCEIRNALAAS 488 (504)
T ss_dssp SGGGG-GGTS-CEEEEECCCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CHHHH-HHhc-CCCeEEccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99886 6665 5778999999988877 6799999999998874
No 8
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=100.00 E-value=1e-98 Score=806.41 Aligned_cols=479 Identities=22% Similarity=0.293 Sum_probs=438.1
Q ss_pred CceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEE
Q 009868 6 EVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIG 85 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIg 85 (523)
|+|+||||+|||++|++|+|.+|+++++.+.+++..+|.+||+||||++||+++++++++++ + .++++.+ |.+||
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~---~~~~~~~-I~~Ig 78 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-Q---SGVDARR-VSAIV 78 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-T---TTCCGGG-EEEEE
T ss_pred ccEEEEEEeCCCceEEEEECCCCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-h---cCCChhH-eEEEE
Confidence 56999999999999999999999999999999999999999999999999999999999998 5 4566788 99999
Q ss_pred EccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhcChHHHHHHh
Q 009868 86 LTNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMENVDAVKEAIK 165 (523)
Q Consensus 86 is~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~ 165 (523)
|++|++++++||+ +|+|++|+|+|+|.|+.++++++.+.. +.++++++||+++++.++++||+|+++|+||+|++++
T Consensus 79 is~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~--~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~ 155 (511)
T 3hz6_A 79 LSGQMQNFLPLDQ-DHEPLHRAVLYSDKRPLKEAEEINARH--GADNLWSALENPMTAASILPKLVFWRASFPQAFGRLR 155 (511)
T ss_dssp EEECCSCBEEECT-TSCBSSCEECTTCCCCHHHHHHHHHHH--CHHHHHHHHSSCCSTTSHHHHHHHHHHHCHHHHTTCC
T ss_pred EecccccEEEECC-CcCCCcCceecCCCCHHHHHHHHHhcc--CHHHHHHHHCCCCCchhHHHHHHHHHHhChHHHHHHH
Confidence 9999999999998 899999999999999999999999885 5788999999999999999999999999999999987
Q ss_pred cCCceeeC-hhHHHHHhhcCCCCCceeEeecchhcccccccCCCCCCCHHHHhhcCCCCCCCCCcccCCcccccccc---
Q 009868 166 KGDALFGT-IDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEILPKIVSNSEIIGKIGK--- 241 (523)
Q Consensus 166 ~~~~~~~~-~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~--- 241 (523)
+ |++ ++|||.|+||| ++++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|+++.
T Consensus 156 ~----~l~~~~dyl~~~LTG-----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~l~~~~a 226 (511)
T 3hz6_A 156 H----VVLGAKDYVVLRLTG-----RHATDRTNASTTGLYRPKDDAWHVELLADYGFSLDLMPRLLEPGEQVGGVSALAA 226 (511)
T ss_dssp E----EECSHHHHHHHHHHS-----CCEECHHHHHHTTCEETTTTEECHHHHHHTTCCGGGSCEECCTTSEEEECCHHHH
T ss_pred H----HhcCcHHHHHHHHhC-----CceeeHhHhhcccceeCCCCCcCHHHHHHhCCCHHHCCCCcCCCCcccccCHHHH
Confidence 5 999 99999999999 8999999999999999999999999999999999999999999999999974
Q ss_pred ---CCCCCCCcEEEeccchhhhhhcCCC-CCCCeEEEecCceeeeeecCcccccc-CCCceeeeeeecCCCCCceeEecc
Q 009868 242 ---GWPITGIPISGCLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEEVVKS-KHGLLSTLAFKLGPKAPTNYALEG 316 (523)
Q Consensus 242 ---~~l~~g~pV~~g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 316 (523)
| |++|+||++|++|++|+++|+|+ ++|++++++|||+++.++++.+|..+ +.+.+..+++. .++.|.+.+
T Consensus 227 ~~~G-l~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g 301 (511)
T 3hz6_A 227 RQTG-FVSGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTQTDPVGDMPVGTIFRLAGI----IAGKTLQVA 301 (511)
T ss_dssp HHHC-CCTTCEEECCEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEECCCCCSCCSSCCEEECSS----STTEEEEEE
T ss_pred HhhC-CCCCCeEEEECchHHHHHHhCCCCCCCcEEEEecchhhheeecCCeecccCCCCceEEEEEe----cCCceEEEe
Confidence 5 88999999999999999999999 99999999999999877664256766 66666566653 356666668
Q ss_pred chhchhHHHHHHHHHcC--CCCCHHHHHHHHHhc-CC---CCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHHH
Q 009868 317 SIAIAGAAVQWLRDSLG--IISSASEIEELALQV-NS---TGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIAR 390 (523)
Q Consensus 317 ~~~~~G~~l~w~~~~~~--~~~~~~~l~~~a~~~-~~---~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~r 390 (523)
+++++|.+++|+++.++ ...+|+++++++++. |+ ++|++|+|||+|+|+|+||+++||+|+||+..|+++||+|
T Consensus 302 ~~~~~G~~~~W~~~~~~~~~~~~~~~l~~~a~~~~~g~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~R 381 (511)
T 3hz6_A 302 PVLNAGNILQWALTLVGHRPGEDCAEYFHMAAAEVQGVTVPDGLLFVPYLHAERCPVELPAPRGALLGVTGATTRAQILL 381 (511)
T ss_dssp EESSSHHHHHHHGGGGTCCTTSCSHHHHHHHHHHHTTCCCCTTCEEEEESSCBCSSSCBSSCEEEEECCCTTCCHHHHHH
T ss_pred ehhhHHHHHHHHHHHhcccccccHHHHHHHHHhCCCCCCCCCCEEEeCCCCCCCCCCCCCccceEEEcCCCCCCHHHHHH
Confidence 99999999999999987 555799999999886 68 8999999999999999999999999999999999999999
Q ss_pred HHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCce-eecCCCCccHHHHHHHHHH
Q 009868 391 AVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPV-IRPADIETTALGAAFAAGL 469 (523)
Q Consensus 391 Av~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv-~~~~~~e~~alGaA~lA~~ 469 (523)
|++|||||++|++++.|++ |. +++|+++||++||++|+|++||++|+|| ++++..|++|+|||++|++
T Consensus 382 AvlEgia~~~~~~~~~l~~--g~---------~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~~e~~alGaA~lA~~ 450 (511)
T 3hz6_A 382 AVLEGAALSLRWCAELLGM--EK---------VGLLKVVGGGARSEAWLRMIADNLNVSLLVKPDAHLHPLRGLAALAAV 450 (511)
T ss_dssp HHHHHHHHHHHHHHHHHTG--GG---------CCEEEEESGGGGCHHHHHHHHHHHTCEEEECCCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc--CC---------CCEEEEeCchhcCHHHHHHHHHHHCCeeEEecCCCCchHHHHHHHHHH
Confidence 9999999999999999976 43 4789999999999999999999999999 9988999999999999999
Q ss_pred hccccCChhHHhccc---CCCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHhch
Q 009868 470 AIGVFKEEEIFDSGE---RTKTSTTFKPVLNEEFRK-KKAESWCRAVERTFNL 518 (523)
Q Consensus 470 ~~G~~~~~~~a~~~~---~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~~~~~ 518 (523)
++|.|+|++++++++ + +..++|+|++++++.| ++|++|+++|+.++..
T Consensus 451 a~G~~~~~~~~~~~~~~~~-~~~~~~~P~~~~~~~y~~~y~~~~~~~~~l~~~ 502 (511)
T 3hz6_A 451 ELEWSHSIQDFLREADLRE-PASNILHPQPCDEGRRRRKFERFKQCVETLGRL 502 (511)
T ss_dssp HTTSCSCHHHHHHHHHTC----CCCBCCCCCCHHHHHHHHHHHHHHHHHHTC-
T ss_pred HhCCcCCHHHHHHHhhccC-CCCeEECcCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999997766776 5 4678999999988776 6799999999998754
No 9
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=100.00 E-value=5.2e-97 Score=793.06 Aligned_cols=494 Identities=40% Similarity=0.692 Sum_probs=447.4
Q ss_pred CceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEE
Q 009868 6 EVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIG 85 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIg 85 (523)
|+|+||||+|||++|++|+|.+|+++.+.+.+++..+|.+||.||||++||+++++++++++++.. .++++.+ |.+||
T Consensus 3 m~~~lgIDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~-~~~~~~~-i~~Ig 80 (503)
T 2w40_A 3 MNVILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLK-DKYTSVI-IKCIG 80 (503)
T ss_dssp CEEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHH-HHSSSCE-EEEEE
T ss_pred ccEEEEEEeCCcceEEEEECCCCCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhh-cCCCccc-eEEEE
Confidence 368999999999999999999999999999999988999999999999999999999999987620 0344568 99999
Q ss_pred EccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhcChHHHHHHh
Q 009868 86 LTNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMENVDAVKEAIK 165 (523)
Q Consensus 86 is~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~ 165 (523)
|++|++++++||+++|+|++|+|.|+|.|+.++++++.+. +..++++++||+++++.++++||+|+++|+||+|++++
T Consensus 81 is~~~~~~~~~D~~~G~~l~~~i~w~D~r~~~~~~~l~~~--~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~ 158 (503)
T 2w40_A 81 ITNQRETVIIWDRITGKPLYNAIVWLDTRVEELVTEFSAK--YNNNDIQKKTGTYFNTYFSAFKILWLIQNNPEIKQKID 158 (503)
T ss_dssp EEECSSCEEEEETTTCCBSSCEECTTCCTTHHHHHHHHHH--SCHHHHHHHHSSCCCSSSHHHHHHHHHHHCHHHHHHHH
T ss_pred EcCCcceEEEEECCCCcCCccceeecccCcHHHHHHHHhc--cchHHHHHHhCCCCCcccHHHHHHHHHHhChHHHHHHh
Confidence 9999999999998459999999999999999999999987 35678999999999999999999999999999999999
Q ss_pred cCCceeeChhHHHHHhhcCCCCCceeEeecchhcccccccCCCCCCCHHHHhhcCCC-CCCCCCcccCCccccccccCCC
Q 009868 166 KGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIP-AEILPKIVSNSEIIGKIGKGWP 244 (523)
Q Consensus 166 ~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~-~~~LP~i~~~~~~~G~v~~~~l 244 (523)
+++++|++++|||.|+|||+ ++++|+|+||+|++||+++++||+++|+.+||+ .++||+|+++++++|+++...+
T Consensus 159 ~~~~~~~~~~d~l~~~LTG~----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~~lP~i~~~~~~~G~~~~~~~ 234 (503)
T 2w40_A 159 DGTAVIGNINTWLIFNLTKG----NCYTDVTNASRTLLMDINTLQWDEKMCKIFNITNMSVLPEIKSNCSNFGLVKSEHV 234 (503)
T ss_dssp TTCEEEEEHHHHHHHHHHTS----CCEEEHHHHTTTTCBCTTTCSBCHHHHHHTTCCCGGGSCEEECSEEEEEECCCTTS
T ss_pred cCCeEEECHHHHHHHHHcCC----CccccHHHhhhhcCccCCCCccCHHHHHHcCCChHHHCCCccCCcCceeeccHHHc
Confidence 88888999999999999993 499999999999999999999999999999999 9999999999999999986522
Q ss_pred CC--CCcEEEeccchhhhhhcCCC-CCCCeEEEecCceeeeeecCccccccCCCceeeeeeecCCCCCceeEeccchhch
Q 009868 245 IT--GIPISGCLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEEVVKSKHGLLSTLAFKLGPKAPTNYALEGSIAIA 321 (523)
Q Consensus 245 ~~--g~pV~~g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (523)
.+ |+||++|++|++|+++|+|+ ++|++++++|||+++.+++++.|..++.+.+..++|..+...++.|.++++++++
T Consensus 235 g~~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 314 (503)
T 2w40_A 235 PDYLNIPITGCIGDQQSACIGQAIFDEGEAKCTYGTGVFLLINTGEKVVYSTCGLITTICYKFNDNDKPKYALEGSIGTA 314 (503)
T ss_dssp GGGTTCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEECCSTTSCCEEEEEEEESCS
T ss_pred CCCCCceEEEECchHHHHHHhCCCCCCCcEEEEechhheeeeecCCccccCCCCceeEEEeecCCCCCceEEEechhhhh
Confidence 35 89999999999999999999 9999999999999987776545666666777777775410002389999999999
Q ss_pred hHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHhhhhhHHH
Q 009868 322 GAAVQWLRDSLGIISSASEIEELALQVNSTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLESMCFQVK 401 (523)
Q Consensus 322 G~~l~w~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~rAv~Egia~~~r 401 (523)
|.+++|+++ ++...+|++++++++++|+++|++|+|||.|+|+|+|||++||+|+||+..|+++|++||++|||||++|
T Consensus 315 g~~~~w~~~-~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~ 393 (503)
T 2w40_A 315 GSGVSWLLK-NKLIDDPSEASDIMEKCENTTGVIFVPAFSGLYAPRWRSDARASIYGMTFNTERSHIVRALLEGIAFQLN 393 (503)
T ss_dssp HHHHHHHHH-TTSSSCGGGHHHHHHHCCSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHH-hCCcCCHHHHHHHHhhCCCCCCEEEecCCCCCCCCCCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999 8766679999999998888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccccccccccCc-cEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHHHHHHHHHHhccccCChhHH
Q 009868 402 DVLDSMQKDAVEKGVIKDAKSE-FLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIF 480 (523)
Q Consensus 402 ~~l~~l~~~~g~~~~~~~~~~~-~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~~~G~~~~~~~a 480 (523)
++++.|++..|.+ + ++|+++||++||++|+|++||++|+||.++...|++|+|||++|++++|.|+|++++
T Consensus 394 ~~~~~l~~~~g~~--------~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~~~~e~~alGaA~la~~~~G~~~~~~~~ 465 (503)
T 2w40_A 394 EIVDSLTSDMGIE--------MLHVLRCDGGMTKNKPFMQFNSDIINTKIEVSKYKEVTSLGAAVLAGLEVKIWDSLDSV 465 (503)
T ss_dssp HHHHHHHHHHTCS--------CCSCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTCSSCHHHH
T ss_pred HHHHHHHHhcCCC--------ccceEEEeCccccCHHHHHHHHHHHCCeEEecCCCcchHHHHHHHHHHHhCccCCHHHH
Confidence 9999998756777 8 899999999999999999999999999999999999999999999999999999998
Q ss_pred hcccCCCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHhch
Q 009868 481 DSGERTKTSTTFKPVLNEEFRK-KKAESWCRAVERTFNL 518 (523)
Q Consensus 481 ~~~~~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~~~~~ 518 (523)
.+.+. +..++|+|++++ +.| ++|++|+++|++.++|
T Consensus 466 ~~~~~-~~~~~~~P~~~~-~~y~~~y~~~~~~~~~~~~~ 502 (503)
T 2w40_A 466 KSLLR-RSDAVFHSKMDD-KKRKKKTSEWNKAVERTLIQ 502 (503)
T ss_dssp HHHHT-CEEEEECCCSCH-HHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcc-CCCcEEccCCCH-HHHHHHHHHHHHHHHHHhhc
Confidence 65544 467899999998 555 6899999999998877
No 10
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=100.00 E-value=2.4e-96 Score=787.67 Aligned_cols=491 Identities=49% Similarity=0.861 Sum_probs=447.7
Q ss_pred ceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEE
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGL 86 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgi 86 (523)
.|+||||+|||++|++|+|.+|+++++.+.+++..+|.+||.||||++||+++++++++++++ .++++.+ |.+|||
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~---~~~~~~~-i~~Igi 77 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTR---GNLTHED-IAAVGI 77 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGG-EEEEEE
T ss_pred CEEEEEecCCcceEEEEECCCCCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHH---cCCCccc-EEEEEE
Confidence 479999999999999999999999999999999889999999999999999999999999887 4566678 999999
Q ss_pred ccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhcChHHHHHHhc
Q 009868 87 TNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMENVDAVKEAIKK 166 (523)
Q Consensus 87 s~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~ 166 (523)
++|++++++||+++|+|++|+|.|+|.|+.++++++.+.. +.++++++||+++++.++++||+|+++|+|++|+++++
T Consensus 78 s~~g~~~v~vD~~~G~~l~~~i~w~D~R~~~~~~~l~~~~--~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~ 155 (504)
T 2d4w_A 78 TNQRETAVVWDKTTGKPVYNAIVWQDTRTQKIVDELGGDE--GAEKYKSIVGLPLATYFSGPKIKWILDNVEGAREKAEK 155 (504)
T ss_dssp EECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHCSS--CGGGGHHHHSCCSCTTSHHHHHHHHHHHSTTHHHHHHH
T ss_pred eCCCCeEEEEECCCCCCccccceecccChHHHHHHHHhhc--chHHHHHHhCCCCCchhHHHHHHHHHHcChhHHHHHhc
Confidence 9999999999984599999999999999999999998754 46789999999999999999999999999999999998
Q ss_pred CCceeeChhHHHHHhhcCCCCCce---eEeecchhcccccccCCCCCCCHHHHhhcCCCCCCCCCcccCCcccccccc-C
Q 009868 167 GDALFGTIDTWLIWNLTGGVNGGL---HVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEILPKIVSNSEIIGKIGK-G 242 (523)
Q Consensus 167 ~~~~~~~~~d~l~~~LTG~~~~~~---~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~-~ 242 (523)
++++|++++|||.|+|||+. + +++|+|+||+|+|||+++++|++++|+.+||+.++||+|+++++++|+++. .
T Consensus 156 ~~~~~~~~~d~l~~~LTG~~---~~~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~~ 232 (504)
T 2d4w_A 156 GDLLFGNTDTWVLWNMTGGT---EGGVHVTDVTNASRTMLMDLDTLSWREDIAADMGIPLSMLPDIRSSSEVYGHGRPRG 232 (504)
T ss_dssp TCEEEECHHHHHHHHHTTTT---TTCCCEEEHHHHTTTTCEETTTTEECHHHHHHTTCCGGGSCEEECSEEEEEECCTTS
T ss_pred CCeEEecHHHHHHHHhcCCC---cCCceeeehhhhhhhcCccCCCCccCHHHHHHhCCCHHHCCCccCCccceeccchHH
Confidence 88889999999999999941 4 899999999999999999999999999999999999999999999999976 3
Q ss_pred CCCCCCcEEEeccchhhhhhcCCC-CCCCeEEEecCceeeeeecCccccccCCCceeeeeeecCCCCCceeEeccchhch
Q 009868 243 WPITGIPISGCLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEEVVKSKHGLLSTLAFKLGPKAPTNYALEGSIAIA 321 (523)
Q Consensus 243 ~l~~g~pV~~g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (523)
.+.+ +||++|++|++|+++|+|+ ++|++++++|||+++.+++++.|..++.+.+..++|..+. .+..|.++++++++
T Consensus 233 ~~G~-~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~ 310 (504)
T 2d4w_A 233 LVPG-VPIAGILGDQQAATFGQACFEVGQAKNTYGTGNFLLLNTGTEKVMSKNGLLTTVCYKIGD-APAVYALEGSIAVT 310 (504)
T ss_dssp SSTT-CEEEEEEEHHHHHHHHTTCCSTTEEEEEESSSEEEEEECTTSCCCCSSSCEEEEEECCTT-SCCEEEEEEEESCS
T ss_pred hCCC-CeEEEECCcHHHHHhhCCCCCCCcEEEEcchhheeeeecCCccccCCCCcEEEEEEEcCC-CCceEEEcchhhhH
Confidence 2335 9999999999999999999 9999999999999987776545666666777777775410 12389999999999
Q ss_pred hHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHhhhhhHHH
Q 009868 322 GAAVQWLRDSLGIISSASEIEELALQVNSTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLESMCFQVK 401 (523)
Q Consensus 322 G~~l~w~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~rAv~Egia~~~r 401 (523)
|.+++|+++.++...+|++++++++++|+++|++|+|||.|+|+|+|||++||+|+||+..|+++||+||++|||||++|
T Consensus 311 G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~ 390 (504)
T 2d4w_A 311 GSLVQWLRDNLGMFEDAPDVEWLAGKVQDNGGAYFVPAFSGLFAPYWRPDARGALVGLTRYVNRNHIARAALEATAFQSR 390 (504)
T ss_dssp HHHHHHHHHTTCTTTTCSCTHHHHTTSSSCTTCEEECTTCCCSTTTCCCCSCEEEEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHhhCCCCCCEEEecCCCCCCCCCCCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999988765678889999988888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHHHHHHHHHHhccccCChhHHh
Q 009868 402 DVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFD 481 (523)
Q Consensus 402 ~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~~~G~~~~~~~a~ 481 (523)
++++.|++..|.+ +++|+++||++||++|+||+||++|+||+++...|++|+|||++|++++|.|+|++++.
T Consensus 391 ~~~~~l~~~~g~~--------~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA~~~~G~~~~~~~~~ 462 (504)
T 2d4w_A 391 EVVDAMNADSGVD--------LTELRVDGGMVANELLMQFQADQLGVDVVRPKVAETTALGAAYAAGIAVGFWKGEQDVI 462 (504)
T ss_dssp HHHHHHHHHHSCC--------CCEEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHHTSSCSHHHHH
T ss_pred HHHHHHHHhcCCC--------cceEEEeCCcccCHHHHHHHHHHhCCeEEeCCCCcchHHHHHHHHHhhcCccCCHHHHH
Confidence 9999998766877 89999999999999999999999999999999999999999999999999999999984
Q ss_pred cccCCCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHhchh
Q 009868 482 SGERTKTSTTFKPVLNEEFRK-KKAESWCRAVERTFNLA 519 (523)
Q Consensus 482 ~~~~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~~~~~~ 519 (523)
++. +..++|+|++++ +.| ++|++|+++|+++++|.
T Consensus 463 -~~~-~~~~~~~P~~~~-~~y~~~y~~~~~~~~~~~~~~ 498 (504)
T 2d4w_A 463 -DNW-AEDKRWSPSMES-GERERLYRNWKKAVTKTMEWV 498 (504)
T ss_dssp -HHC-CEEEEECCCSCH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred -hhc-CCCeEEccCCCH-HHHHHHHHHHHHHHHHHhccc
Confidence 554 467899999998 555 68999999999999884
No 11
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=5e-96 Score=783.96 Aligned_cols=491 Identities=48% Similarity=0.816 Sum_probs=446.7
Q ss_pred ceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEE
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGL 86 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgi 86 (523)
+|+||||+|||++|++|+|.+|+++.+.+.+++..+|.+||.||||++||+++++++++++++ .++++++ |.+|||
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~---~~~~~~~-i~~Igi 77 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRR---AGAEAGE-VLALGI 77 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGG-CCEEEE
T ss_pred cEEEEEeeCCcceEEEEECCCCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHh---cCCCccc-EEEEEE
Confidence 478999999999999999999999999999999889999999999999999999999999887 4566678 999999
Q ss_pred ccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhcChHHHHHHhc
Q 009868 87 TNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMENVDAVKEAIKK 166 (523)
Q Consensus 87 s~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~ 166 (523)
++|++++++||+++|+|++|+|.|+|.|+.++++++.+. +..++++++||+++++.++++||+|+++|+|++|+++++
T Consensus 78 s~~~~~~~~vD~~~G~~l~~~i~w~D~R~~~~~~~l~~~--~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~ 155 (495)
T 2dpn_A 78 TNQRETTLLWDRKTGKPLHNAIVWQDRRTTPLCEALRAK--GLEPLFRERTGLLFDPYFSGTKLVWLLENVPGLKARAEG 155 (495)
T ss_dssp EECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHT--TCHHHHHHHTSCCSCTTSHHHHHHHHHHHSSSHHHHHHH
T ss_pred eCCCccEEEEECCCCcCCccceeecccChHHHHHHHHhc--cchhHHHHHhCCCCCchhHHHHHHHHHHcCHHHHHHHhc
Confidence 999999999998459999999999999999999999876 346789999999999999999999999999999999998
Q ss_pred CCceeeChhHHHHHhhcCCCCCceeEeecchhcccccccCCCCCCCHHHHhhcCCCCCCCCCcccCCccccccccCCCCC
Q 009868 167 GDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEILPKIVSNSEIIGKIGKGWPIT 246 (523)
Q Consensus 167 ~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~~~l~~ 246 (523)
++++|++++|||.|+|||+. ++++|+|+||+|+|||+++++|++++|+.+||+.++||+|+++++++|+++...+.+
T Consensus 156 ~~~~~~~~~d~l~~~LTG~~---~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~~~G~ 232 (495)
T 2dpn_A 156 GGVAFGTVDTWLIWNLTGGK---VHATDPTNASRTLLFNLHTLAWDPELLEALGIPAALLPEVRPSDGDFGETLPELLGA 232 (495)
T ss_dssp TCEEEECHHHHHHHHHTTTS---CCEECHHHHTTSSSEETTTTEECHHHHHHTTCCSTTCCEECCTTSCCCBCCHHHHSS
T ss_pred CCcEEECHHHHHHHHhcCCC---eEEEehHHhHhhcCccCccCCcCHHHHHHcCCCHHHCCCccCCCCeeEeccHHHcCC
Confidence 78889999999999999942 589999999999999999999999999999999999999999999999997532227
Q ss_pred CCcEEEeccchhhhhhcCCC-CCCCeEEEecCceeeeeecCccccccCCCceeeeeeecCCCCCceeEeccchhchhHHH
Q 009868 247 GIPISGCLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEEVVKSKHGLLSTLAFKLGPKAPTNYALEGSIAIAGAAV 325 (523)
Q Consensus 247 g~pV~~g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l 325 (523)
|+||++|++|++|+++|+|+ ++|++++++|||+++.+.+++.|..++.+.+..++|..+ .++.|.++++++++|.++
T Consensus 233 g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~g~~~ 310 (495)
T 2dpn_A 233 PVPIRGVLGDQQAALFGQAALGGGEGKCTYGTGAFLLLNTGKRPVLSEKGLLATVAWSLG--GRATYALEGSLFVAGAAV 310 (495)
T ss_dssp CCBEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEEEET--TEEEEEEEEEESCSHHHH
T ss_pred CCeEEEECcHHHHHHHhCCCCCCCcEEEEccHhhhhhhhcCCccccCCCCceEEEEEEcC--CCCEEEEechHHhHHHHH
Confidence 99999999999999999999 999999999999998777654566666677777777652 134899999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHHHHhcCCCCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHhhhhhHHHHHHH
Q 009868 326 QWLRDSLGIISSASEIEELALQVNSTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLESMCFQVKDVLD 405 (523)
Q Consensus 326 ~w~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~rAv~Egia~~~r~~l~ 405 (523)
+|+++ ++...+|++++++++++|+++|++|+|||.|+|+|+|||++||+|+||+..|+++||+||++||+||++|++++
T Consensus 311 ~w~~~-~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~~~rAvlEgia~~~~~~~~ 389 (495)
T 2dpn_A 311 GWLKE-VGLIRESAEVEALAASVEDTGDVYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAHLARAALEGVAFQVRDVVL 389 (495)
T ss_dssp HHHHH-TTSSSSTTTHHHHHHTCSCCSSCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-cCCccCHHHHHHHHhhCCCCCcEEEecCCCCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 87666788999999888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHHHHHHHHHHhccccCChhHHhcccC
Q 009868 406 SMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFDSGER 485 (523)
Q Consensus 406 ~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~~~G~~~~~~~a~~~~~ 485 (523)
.|++..|.+ +++|+++||++||++|+|++||++|+||.++...|++|+|||++|++++|.| |++++ .++.
T Consensus 390 ~l~~~~g~~--------~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~~~~e~~alGaA~la~~a~G~~-~~~~~-~~~~ 459 (495)
T 2dpn_A 390 AMEEEAGVR--------LKVLKADGGMAQNRLFLKIQADLLGVPVAVPEVTETTALGAALMAGVGAGAL-SPEDV-AGRF 459 (495)
T ss_dssp HHHTTTSCC--------CCCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHHTSC-CHHHH-HHHC
T ss_pred HHHHhcCCC--------CcEEEEecccccCHHHHHHHHHHhCCeeEecCCcccHHHHHHHHHHhhcCcC-CHHHH-HHhc
Confidence 998766777 8999999999999999999999999999999999999999999999999999 99988 4544
Q ss_pred CCCCcEEeCCCCHHHHHHHHHHHHHHHHHHhchhc
Q 009868 486 TKTSTTFKPVLNEEFRKKKAESWCRAVERTFNLAD 520 (523)
Q Consensus 486 ~~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~~ 520 (523)
+..++|+|+++...+.++|++|+++|+++++|.+
T Consensus 460 -~~~~~~~P~~~~~~y~~~~~~~~~~~~~~~~~~~ 493 (495)
T 2dpn_A 460 -REAERFLPTMPEGRREALYRRWREAVERAKGWAR 493 (495)
T ss_dssp -CEEEEECCCSCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred -CCCeEEccCCCHHHHHHHHHHHHHHHHHHhhhhh
Confidence 4678999999983344789999999999998843
No 12
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=100.00 E-value=7.7e-96 Score=782.86 Aligned_cols=485 Identities=49% Similarity=0.778 Sum_probs=444.3
Q ss_pred CceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEE
Q 009868 6 EVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIG 85 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIg 85 (523)
++|+||||+|||++|++++|.+|+++++.+.+++..+|.+||.||||++||+++++++++++++ .++++++ |.+||
T Consensus 2 ~~~~lgiDiGtt~~k~~l~d~~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~---~~~~~~~-i~~Ig 77 (497)
T 2zf5_O 2 EKFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQS---ARIEPNQ-IAAIG 77 (497)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHH---HTCCGGG-EEEEE
T ss_pred CcEEEEEecCCchhEEEEECCCCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHh---cCCCccc-EEEEE
Confidence 3589999999999999999999999999999999889999999999999999999999999877 3566678 99999
Q ss_pred EccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhcChHHHHHHh
Q 009868 86 LTNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMENVDAVKEAIK 165 (523)
Q Consensus 86 is~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~ 165 (523)
|++|++++++||+ +|+|++|+|.|+|.|+.++++++.+. ..++++++||+++++.++++||+|+++|+|++|++++
T Consensus 78 is~~~~~~v~~D~-~G~~l~~~i~w~D~R~~~~~~~l~~~---~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~ 153 (497)
T 2zf5_O 78 VTNQRETTLVWDK-DGKPLYNAIVWQCRRTAEMVEEIKRE---YGTMIKEKTGLVPDAYFSASKLKWLLDNVPGLREKAE 153 (497)
T ss_dssp EEECSSCEEEECT-TCCBSSCEECTTCCTTHHHHHHHHHH---HHHHHHHHHSSCCCTTSHHHHHHHHHHHSTTHHHHHH
T ss_pred EecCCCcEEEECC-CCCCcccceeecccCcHHHHHHHHhh---hHHHHHHHhCCCCCchhHHHHHHHHHHcCHHHHHHHh
Confidence 9999999999999 99999999999999999999999875 2467999999999999999999999999999999999
Q ss_pred cCCceeeChhHHHHHhhcCCCCCceeEeecchhcccccccCCCCCCCHHHHhhcCCCCCCCCCcccCCccccccccCCCC
Q 009868 166 KGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEILPKIVSNSEIIGKIGKGWPI 245 (523)
Q Consensus 166 ~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~~~l~ 245 (523)
++.++|++++|||.|+||| ++++|+|+||+|++||+++++|++++|+.+||+.++||+|+++++++|+++...+.
T Consensus 154 ~~~~~~~~~~d~l~~~LTG-----~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~~~g 228 (497)
T 2zf5_O 154 KGEVMFGTVDTFLIYRLTG-----EHVTDYSNASRTMLFNIKKLDWDDELLELFDIPESVLPEVRESSEVYGYTKKELLG 228 (497)
T ss_dssp TTCCEEEEHHHHHHHHHHS-----CCEEEHHHHTTSSSEETTTTEECHHHHHHTTCCGGGCCEEECSEEEEEECCHHHHS
T ss_pred cCCCEEEcHHHHHHHHHhC-----CeeeeHHHhhhhcCccCCCCCcCHHHHHHcCcCHHHCCCcCCCCCeeeecCHHHcC
Confidence 8788899999999999999 89999999999999999999999999999999999999999999999999753223
Q ss_pred CCCcEEEeccchhhhhhcCCC-CCCCeEEEecCceeeeeecCccccccCCCceeeeeeecCCCCCceeEeccchhchhHH
Q 009868 246 TGIPISGCLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEEVVKSKHGLLSTLAFKLGPKAPTNYALEGSIAIAGAA 324 (523)
Q Consensus 246 ~g~pV~~g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 324 (523)
+|+||++|++|++|+++|+|+ ++|++++++|||+++.+.++ +|..++.+.+..++|..+ .++.|.++++++++|.+
T Consensus 229 ~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~G~~ 305 (497)
T 2zf5_O 229 AEIPVSGDAGDQQAALFGQAAFEAGMVKATYGTGSFILVNTD-KMVLYSDNLLTTIAWGLN--GRVSYALEGSIFVTGAA 305 (497)
T ss_dssp SCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEE-TCCCCCTTSEEEEEEEET--TEEEEEEEEEESCSHHH
T ss_pred CCCeEEEEccHHHHHHHhCCCCCCCcEEEEcchhheeeEECC-CCccCCCCcEEEEEEEcC--CCCEEEEechhhhHHHH
Confidence 799999999999999999999 99999999999999877665 466666677777777652 13489999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHhcCCCCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHhhhhhHHHHHH
Q 009868 325 VQWLRDSLGIISSASEIEELALQVNSTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLESMCFQVKDVL 404 (523)
Q Consensus 325 l~w~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~rAv~Egia~~~r~~l 404 (523)
++|+++.++...+|++++++++++|+++|++|+|||.|+|+|+|||++||+|+||+..|+++|++||++||+||++|+++
T Consensus 306 ~~w~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~l 385 (497)
T 2zf5_O 306 VQWLRDGIKIIKHASETEELATKLESNEGVYFVPAFVGLGAPYWDQFARGIIIGITRGTGREHLARATLEAIAYLTRDVV 385 (497)
T ss_dssp HHHHHHTSCCCSCGGGHHHHHTTSSSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcHHHHHHHHhhCCCCCceEEecCcCCCCCCCCCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999988766678999999988888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHHHHHHHHHHhccccCChhHHhccc
Q 009868 405 DSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFDSGE 484 (523)
Q Consensus 405 ~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~~~G~~~~~~~a~~~~ 484 (523)
+.|++. + + +++|+++||++||++|+|++||++|+||+++...|++|+|||++|++++|.|++++++ .++
T Consensus 386 ~~l~~~-~-~--------~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA~~~~g~~~~~~~~-~~~ 454 (497)
T 2zf5_O 386 DEMEKL-V-Q--------IKELRVDGGATANDFLMQFQADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREI-AEL 454 (497)
T ss_dssp HHHTTT-S-C--------CCCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTSSCCHHHH-HTT
T ss_pred HHHHhc-C-C--------cceEEEeCccccCHHHHHHHHhhcCCeEEEcCCCcchHHHHHHHHHHHhCccCCHHHH-HHh
Confidence 999764 5 6 8999999999999999999999999999999999999999999999999999999998 455
Q ss_pred CCCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHhchh
Q 009868 485 RTKTSTTFKPVLNEEFRK-KKAESWCRAVERTFNLA 519 (523)
Q Consensus 485 ~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~~~~~~ 519 (523)
. +..++|+|+++. +.| ++|++|+++|++++.|.
T Consensus 455 ~-~~~~~~~P~~~~-~~y~~~y~~~~~~~~~~~~~~ 488 (497)
T 2zf5_O 455 W-KAERIFEPKMDE-KTRERLYKGWKEAVKRAMGWA 488 (497)
T ss_dssp C-CEEEEECCCCCH-HHHHHHHHHHHHHHHTTTTGG
T ss_pred c-CCCeEECCCccH-HHHHHHHHHHHHHHHHHHhHh
Confidence 4 467899999998 555 68999999999998883
No 13
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=100.00 E-value=1.9e-93 Score=775.55 Aligned_cols=481 Identities=21% Similarity=0.291 Sum_probs=425.4
Q ss_pred CceEEEEecCCCCceEEEEcC-CCCEEEEEEeeee-----eccCC------CCeEEeCHHHHHHHHHHHHHHHHHHHhhC
Q 009868 6 EVFIGAIDQGTTSTRFIIYDH-QARPIGSHQVEFT-----QFYPE------AGWVEHEPMEILESVRVCMAKALDKATAD 73 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~-~g~i~~~~~~~~~-----~~~~~------~g~~e~d~~~~~~~~~~~l~~~~~~~~~~ 73 (523)
++|+||||+|||++|++|+|. +|+++++.+.+++ ..+|+ +||+||||++||+++++++++++++ .
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~---~ 80 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKE---S 80 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC----
T ss_pred CCEEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHH---c
Confidence 358999999999999999998 9999999999998 56787 9999999999999999999999887 4
Q ss_pred CCCcccCceEEEEccccceeEEeeCCCCccccc-----------cccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCC
Q 009868 74 GHNVDSGLKAIGLTNQRETTVLWSKSTGCPLYN-----------AIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPIS 142 (523)
Q Consensus 74 ~~~~~~~I~aIgis~~~~~~v~~d~~~g~~l~~-----------~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~ 142 (523)
++++.+ |.+|||++||+++++||+ +|+||+| +|+|+|.|+.++++++.+.+....+.++++||++++
T Consensus 81 ~~~~~~-I~~Igis~q~~~~v~~D~-~G~pl~~~~~~~~~p~~~ai~W~D~R~~~~~~~l~~~~~~~~~~~~~~tG~~~~ 158 (572)
T 3jvp_A 81 GVDADD-VIGIGVDFTACTMLPVDE-EGQPLCLLAQYKDNPHSWVKLWKHHAAQDKANAINEMAEKRGEAFLPRYGGKIS 158 (572)
T ss_dssp --CCSC-EEEEEEEECSSCEEEECT-TSCBGGGSSSTTSSGGGSEECTTCCTTHHHHHHHHHHHHHHTCTTGGGGTTCCC
T ss_pred CCChhH-EEEEEEecCCCcEEEECC-CCCCCccCccccccccccceecCccchHHHHHHHHHhccccHHHHHHHhCCCCC
Confidence 566778 999999999999999998 8999998 799999999999999987530012567899999999
Q ss_pred ccChHHHHHHHhhcChHHHHHHhcCCceeeChhHHHHHhhcCCCCCceeEeecchhcccccccCCCCCC-CHHHHhhcC-
Q 009868 143 TYFSAVKLLWMMENVDAVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDW-DKPTLETLG- 220 (523)
Q Consensus 143 ~~~~~~kl~wl~~~~pe~~~~~~~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W-~~~ll~~~g- 220 (523)
+.|+++||+|+++|+||+|+++++ |++++|||.|+||| ++++|+|+||+|+||| ++++| |+++|+.+|
T Consensus 159 ~~~~~~kl~wl~~~~Pe~~~~~~~----~l~~~dyl~~~LTG-----~~~~d~s~As~t~l~d-~~~~W~~~ell~~~g~ 228 (572)
T 3jvp_A 159 SEWMIAKVWQILDEAEDVYNRTDQ----FLEATDWIVSQMTG-----KIVKNSCTAGYKAIWH-KREGYPSNEFFKALDP 228 (572)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHCSE----EEEHHHHHHHHHHS-----SCCEEHHHHHHHSCCB-TTTBSCCHHHHHTTCG
T ss_pred chhHHHHHHHHHHhCHHHHHHhhe----EecHHHHHHHHhcC-----CceeehhhccccceeC-CCCCcCCHHHHHHhCc
Confidence 999999999999999999999886 89999999999999 8899999999999999 99999 999999998
Q ss_pred ----CCCCCC-CCcccCCcccccccc------CCCCCCCcEEEeccchhhhhhcCCC-CCCCeEEEecCceeeeeecCcc
Q 009868 221 ----IPAEIL-PKIVSNSEIIGKIGK------GWPITGIPISGCLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEE 288 (523)
Q Consensus 221 ----i~~~~L-P~i~~~~~~~G~v~~------~~l~~g~pV~~g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~ 288 (523)
|++++| |+|+++++++|+++. | |++|+||++|++|++|+++|+|+ ++|++++++|||+++.+..+ .
T Consensus 229 ~l~~i~~~~L~p~i~~~~~~~G~l~~~~A~~~G-L~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~-~ 306 (572)
T 3jvp_A 229 RLEHLTTTKLRGDIVPLGERAGGLLPEMAEKMG-LNPGIAVAVGNVDAHAAVPAVGVTTPGKLVMAMGTSICHMLLGE-K 306 (572)
T ss_dssp GGTTSTTTTTCSCEECTTSEEEECCHHHHHHHT-SCTTCEEECCEETTTTHHHHTTCCSSEEEEEEESSSEEEEEEES-S
T ss_pred ccccCCHhHCCCccCCcCccccccCHHHHHHhC-CCCCCeEEEeCchHHHHHhhCCCCCCCcEEEEecchhheeeecC-C
Confidence 456677 899999999999974 5 88999999999999999999999 99999999999987655553 2
Q ss_pred ccccCCCceeeeeeecCCCCCceeEeccchhchhHHHHHHHHHcCC-----------CCCHHHHHHHHHhc-CCCCceEE
Q 009868 289 VVKSKHGLLSTLAFKLGPKAPTNYALEGSIAIAGAAVQWLRDSLGI-----------ISSASEIEELALQV-NSTGGVYF 356 (523)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~w~~~~~~~-----------~~~~~~l~~~a~~~-~~~~gl~~ 356 (523)
+... .+....+. ++..|+.|.++++++++|.+++||++.|.. .+.|++|+++++++ |+++|++|
T Consensus 307 ~~~~-~~~~~~~~---~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~g~~~~~~l~~~a~~~~~g~~gl~~ 382 (572)
T 3jvp_A 307 EQEV-EGMCGVVE---DGIIPGYLGYEAGQSAVGDIFAWFVKHGVSAATFDEAQEKGVNVHALLEEKASQLRPGESGLLA 382 (572)
T ss_dssp CCCC-TTCSEEEE---TSSSTTSEEEEEEESCSHHHHHHHHHHTSBHHHHHHHHHTTBCHHHHHHHHHTSSCTTSSCCEE
T ss_pred CccC-CCceeecc---CccCCCcEEEeehhhhHHHHHHHHHHhccchhhHHHHHhcCCCHHHHHHHHHHhCCCCCCCeEe
Confidence 3322 23321111 223578999999999999999999998853 12378899999887 58999999
Q ss_pred EcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCcc-cc
Q 009868 357 VPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGAT-VN 435 (523)
Q Consensus 357 ~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a-~s 435 (523)
+|||.|+|+|+|||++||+|+|++..|+++||+||++|||||++|++++.|++ .|.+ +++|+++||++ ||
T Consensus 383 lP~~~Ger~P~~d~~arg~~~Gl~~~~t~~~l~RAvlEgia~~~r~~~~~l~~-~g~~--------~~~i~~~GGga~ks 453 (572)
T 3jvp_A 383 LDWWNGNRSILVDTELSGMLLGYTLQTKPEEIYRALLEATAFGTRAIVDAFHG-RGVE--------VHELYACGGLPQKN 453 (572)
T ss_dssp ECCTTCCCTTTCCSSCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TTCC--------EEEEEEESSHHHHC
T ss_pred CCccCCCCCCCCCCCcCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC--------cCEEEEEcCchhhC
Confidence 99999999999999999999999999999999999999999999999999987 6887 89999999999 99
Q ss_pred HHHHHHHHhhcCCceeecCCCCccHHHHHHHHHHhcc----ccCChhHHhcccCCCCCcEEeCCCCHHHHH-HHHHHHHH
Q 009868 436 NLLMQIQADLLGSPVIRPADIETTALGAAFAAGLAIG----VFKEEEIFDSGERTKTSTTFKPVLNEEFRK-KKAESWCR 510 (523)
Q Consensus 436 ~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~~~G----~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~-~~y~~~~~ 510 (523)
++|+||+||+||+||+++...|++|+|||++|++++| .|+|++++++.++....++|+|++++++.| ++|++|++
T Consensus 454 ~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~~e~~~~~~~~~~~~~~P~~~~~~~Y~~~y~~y~~ 533 (572)
T 3jvp_A 454 HLLMQIFADVTNREIKVAASKQTPALGAAMFASVAAGSEVGGYDSIEEAAKKMGRVKDETFKPIPEHVAIYEKLYQEYVT 533 (572)
T ss_dssp HHHHHHHHHHHTSCEEEBCCSSHHHHHHHHHHHHHHCSSSSSCSCHHHHHHHHCCBCSCCBCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCeeEecCCCccHHHHHHHHHHHhcCCCccccCCHHHHHHHhhccCCeEEeeCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999987776533457899999988877 57999999
Q ss_pred HHHHHh
Q 009868 511 AVERTF 516 (523)
Q Consensus 511 ~~~~~~ 516 (523)
+|+.+.
T Consensus 534 l~~~l~ 539 (572)
T 3jvp_A 534 LHDYFG 539 (572)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999864
No 14
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=100.00 E-value=7.9e-93 Score=757.50 Aligned_cols=472 Identities=23% Similarity=0.335 Sum_probs=418.3
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEc
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLT 87 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis 87 (523)
|+||||+|||++|++++|.+|++++..+.+++..+|++||+||||++||+++++++++++++ . .+++ |.+|||+
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~---~--~~~~-i~~Igis 74 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQ---H--SLQD-VKALGIA 74 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---S--CCTT-CCEEEEE
T ss_pred CEEEEEecCcccEEEEECCCCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHh---C--Cccc-eEEEEEc
Confidence 46999999999999999999999999999999999999999999999999999999999876 2 2457 9999999
Q ss_pred cccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhcChHHHHHHhcC
Q 009868 88 NQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMENVDAVKEAIKKG 167 (523)
Q Consensus 88 ~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~~ 167 (523)
+|++++++||+ +|+|++|+|.|+|.|+.++++++.+.. + .++++||+++++.++++||+|+++|+||+|+++++
T Consensus 75 ~~~~~~v~~D~-~G~~l~~~i~w~D~R~~~~~~~l~~~~--~--~~~~~tG~~~~~~~~~~kl~wl~~~~P~~~~~~~~- 148 (484)
T 2itm_A 75 GQMHGATLLDA-QQRVLRPAILWNDGRCAQECTLLEARV--P--QSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDK- 148 (484)
T ss_dssp ECSSCBEEECT-TCCBCSCEECTTCCTTHHHHHHHHHHC--T--THHHHHSSCCCTTSHHHHHHHHHHHCHHHHTTCCE-
T ss_pred CCcCcEEEECC-CcCCCcccceecccCcHHHHHHHHHhH--H--HHHHHhCCCCCcccHHHHHHHHHHhChHHHHHHhh-
Confidence 99999999999 799999999999999999999999874 2 46788999999999999999999999999999875
Q ss_pred CceeeChhHHHHHhhcCCCCCceeEeecchhcccccccCCCCCCCHHHHhhcCCCCCCCCCcccCCcccccccc------
Q 009868 168 DALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEILPKIVSNSEIIGKIGK------ 241 (523)
Q Consensus 168 ~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~------ 241 (523)
|+.++|||.|+||| ++++|+|+||+|++||+++++||+++|+.+||+.++||+|+++++++|+++.
T Consensus 149 ---~l~~~d~l~~~LTG-----~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lp~i~~~~~~~G~~~~~~a~~~ 220 (484)
T 2itm_A 149 ---VLLPKDYLRLRMTG-----EFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAW 220 (484)
T ss_dssp ---EECHHHHHHHHHHS-----CCEEEHHHHHTTTCEETTTTEECHHHHHTTTCCGGGSCEEECTTSEEEECCHHHHHHH
T ss_pred ---eeCcHHHHHHHHhC-----CceeeHHHhhccccccCCCCCcCHHHHHHcCCCHHHCCCccCCcceeeccCHHHHHHh
Confidence 88899999999999 8999999999999999999999999999999999999999999999999964
Q ss_pred CCCCCCCcEEEeccchhhhhhcCCC-CCCCeEEEecCceeeeeecCccccccCCCceeeeeeecCCCCCceeEeccchhc
Q 009868 242 GWPITGIPISGCLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEEVVKSKHGLLSTLAFKLGPKAPTNYALEGSIAI 320 (523)
Q Consensus 242 ~~l~~g~pV~~g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (523)
| |+ |+||++|+||++|+++|+|+ ++|++++++|||+++.+..+ .|..++.+....+++ ..++.|++++++.+
T Consensus 221 G-l~-g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~ 293 (484)
T 2itm_A 221 G-MA-TVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSE-GFLSKPESAVHSFCH----ALPQRWHLMSVMLS 293 (484)
T ss_dssp T-SC-CCEEECCEEHHHHHHHHHTCCSTTCEEEEESSSEEEEEECS-SCCCCCSSSCEEEEC----SSTTCEEEEEEECC
T ss_pred C-CC-CCeEEEEchHHHHHHHhCCCCCCCcEEEEccchheeEEecC-CCccCcccceEEeec----ccCCeeeeeehhhh
Confidence 5 77 99999999999999999999 99999999999988765553 444444333333333 24679999999999
Q ss_pred hhHHHHHHHHHcCCCCCHHHHHHHHHhc-CCCCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHhhhhhH
Q 009868 321 AGAAVQWLRDSLGIISSASEIEELALQV-NSTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLESMCFQ 399 (523)
Q Consensus 321 ~G~~l~w~~~~~~~~~~~~~l~~~a~~~-~~~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~rAv~Egia~~ 399 (523)
+|.+++|+++.++. .+|+++.+++++. +++++++|+|||.|+|+|+|||++||+|+|++..|+++|++||++||++|+
T Consensus 294 ~G~~~~W~~~~~~~-~~~~~~~~~a~~~~~~~~gl~~lP~~~G~r~P~~~~~a~g~~~Gl~~~~~~~~~~rAvlEgia~~ 372 (484)
T 2itm_A 294 AASCLDWAAKLTGL-SNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYA 372 (484)
T ss_dssp HHHHHHHHHHHTTC-CSHHHHHHHGGGCCTTSCCCEEEEEEC--------CCEEEEEEEEETTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCc-ccHHHHHHHHhcCCCCCCCeEEeCCCCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999998864 4688888887776 589999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCc-cHHHHHHHHHHhccccCChh
Q 009868 400 VKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIET-TALGAAFAAGLAIGVFKEEE 478 (523)
Q Consensus 400 ~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~-~alGaA~lA~~~~G~~~~~~ 478 (523)
+|++++.|++ .|.+ +++|+++||++||++|+|++||++|+||.+++..|. +|+|||++|++++|.|+|++
T Consensus 373 ~~~~~~~l~~-~g~~--------~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~~~~~~ 443 (484)
T 2itm_A 373 LADGMDVVHA-CGIK--------PQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLI 443 (484)
T ss_dssp HHHHHHHHHT-TTCC--------CSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHHHHHHCTTSCHH
T ss_pred HHHHHHHHHH-cCCC--------cceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHHHHHcCCcCCHH
Confidence 9999999986 4777 899999999999999999999999999999998885 89999999999999999999
Q ss_pred HHhcccCCCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHhch
Q 009868 479 IFDSGERTKTSTTFKPVLNEEFRK-KKAESWCRAVERTFNL 518 (523)
Q Consensus 479 ~a~~~~~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~~~~~ 518 (523)
++.+.+ ...++|+|++++++.| ++|++|++++++++.+
T Consensus 444 ~~~~~~--~~~~~~~P~~~~~~~y~~~y~~~~~~~~~~~~~ 482 (484)
T 2itm_A 444 ELLPQL--PLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPL 482 (484)
T ss_dssp HHSCCC--CEEEEECCCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHhc--CCCeEECCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 985543 3568899999887766 6799999999998764
No 15
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=100.00 E-value=1.8e-92 Score=765.64 Aligned_cols=477 Identities=21% Similarity=0.318 Sum_probs=423.1
Q ss_pred CceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEE
Q 009868 6 EVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIG 85 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIg 85 (523)
++|+||||+|||++|++|||.+|+++++.+.+++..+|++||+||||++||+++++++++++++ .++.+.+ |.+||
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~---~~~~~~~-I~~Ig 79 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQ---ADINPIQ-VKGLG 79 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHH---HTCCGGG-EEEEE
T ss_pred CcEEEEEEECcccEEEEEECCCCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHH---cCCCHhH-EEEEE
Confidence 3599999999999999999999999999999999999999999999999999999999999887 4566778 99999
Q ss_pred EccccceeEEeeCCCCccc---------cccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhc
Q 009868 86 LTNQRETTVLWSKSTGCPL---------YNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMEN 156 (523)
Q Consensus 86 is~~~~~~v~~d~~~g~~l---------~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~ 156 (523)
|++| +++++||+ +|+|| +|+|+|+|.|+.++++++++. . ++++++||+++++.++++||+|+++|
T Consensus 80 is~~-~~~v~~D~-~G~pl~~~~~~~~~~~ai~W~D~Ra~~~~~~l~~~---~-~~~~~~tG~~~~~~~~~~Kl~Wl~~~ 153 (554)
T 3l0q_A 80 FDAT-CSLVVLDK-EGNPLTVSPSGRNEQNVIVWMDHRAITQAERINAT---K-HPVLEFVGGVISPEMQTPKLLWLKQH 153 (554)
T ss_dssp EEEC-SCEEEEET-TSCBCCCSTTCCTTCCEECTTCCTTHHHHHHHHHH---T-CGGGGGBTTCCCTTSHHHHHHHHHHH
T ss_pred EcCC-CceEEECC-CCCEeeccCCCCCCCCcEEecccchHHHHHHHHHh---H-HHHHHHhCCCCChhhHHHHHHHHHHh
Confidence 9999 79999999 89999 899999999999999999986 2 46889999999999999999999999
Q ss_pred ChHHHHHHhcCCceeeChhHHHHHhhcCCCCCceeEeecchhccccc--ccCCCCCCCHHHHhhcCCCCC------CCC-
Q 009868 157 VDAVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTML--MNLKTLDWDKPTLETLGIPAE------ILP- 227 (523)
Q Consensus 157 ~pe~~~~~~~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl--~d~~~~~W~~~ll~~~gi~~~------~LP- 227 (523)
+||+|+++++ |++++|||.|+||| +. ++|++|.+++ ||+++++||+++|+.+||+.. +||
T Consensus 154 ~Pe~~~~~~~----~~~~~dyl~~~LTG-----~~--~~s~as~t~~~~~d~~~~~W~~~ll~~~gi~~~~~~~~~~Lp~ 222 (554)
T 3l0q_A 154 MPNTWSNVGH----LFDLPDFLTWRATK-----DE--TRSLCSTVCKWTYLGHEDRWDPSYFKLVGLADLLDNNAAKIGA 222 (554)
T ss_dssp CHHHHHHEEE----EEEHHHHHHHHHHS-----CC--CEEHHHHHHHSCCBTTTTBCCHHHHHHHTCGGGGHHHHTTTCS
T ss_pred ChHHHHHhce----EEcHHHHHHHHHhC-----Cc--cccccchhhccccccccCCCCHHHHHHcCCccccchhHHhCCC
Confidence 9999999875 89999999999999 44 3677777765 788999999999999999863 899
Q ss_pred CcccCCcccc-ccc------cCCCCCCCcEEEeccchhhhhhcC-CC--CCC-------CeEEEecCceeeeeecCcccc
Q 009868 228 KIVSNSEIIG-KIG------KGWPITGIPISGCLGDQHAAMLGQ-AC--KKG-------EAKSTYGTGAFILMNTGEEVV 290 (523)
Q Consensus 228 ~i~~~~~~~G-~v~------~~~l~~g~pV~~g~gD~~aa~~g~-g~--~~g-------~~~~~~GTs~~~~~~~~~~~~ 290 (523)
+|+++++++| +|+ .| |++|+||++|++|++|+++|+ |+ +|| ++.+++|||+++...++ +|.
T Consensus 223 ~i~~~~~~~G~~lt~~~A~~~G-L~~g~pV~~g~gD~~aa~lg~~G~~~~~G~~~~~~~~~~~~~GTs~~~~~~~~-~~~ 300 (554)
T 3l0q_A 223 TVKPMGAPLGHGLSQRAASEMG-LIPGTAVSVSIIDAHAGTIGILGASGVTGENANFDRRIALIGGTSTAHMAMSR-SAH 300 (554)
T ss_dssp CEECTTCBCTTSSCHHHHHHHT-CCTTCEEBCCEEHHHHHHHHHTTCCCTTSCCCCTTTEEEEECSSSEEEEEEES-SCC
T ss_pred cccCCcCeeCcccCHHHHHHhC-CCCCCeEEEeChHHHhHHhhccccccCCCccccccceEEEEecchheeeeecC-Ccc
Confidence 6999999999 886 35 889999999999999999996 65 588 78899999998776554 565
Q ss_pred ccCCCceeeeeeecCCCCCceeEeccchhchhHHHHHHHHHcCC------------CCCHHHHHHHHHhc-CC-------
Q 009868 291 KSKHGLLSTLAFKLGPKAPTNYALEGSIAIAGAAVQWLRDSLGI------------ISSASEIEELALQV-NS------- 350 (523)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~w~~~~~~~------------~~~~~~l~~~a~~~-~~------- 350 (523)
.++ +.+..+ | .+..|+.|.++++++++|.+++|+++.++. .+.|+.|++.+++. ++
T Consensus 301 ~~~-~~~~~~-~--~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 376 (554)
T 3l0q_A 301 FIS-GIWGPY-Y--SAILPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAGEPENIAFL 376 (554)
T ss_dssp CCT-TSEEEE-E--TSSSTTCEEEEEEESCSHHHHHHHHHTSTTHHHHHHHHHHTTCCHHHHHHHHHHHHHSSGGGGGGG
T ss_pred ccC-Ccceee-c--ccccCCceEecchhhhhHHHHHHHHHhcccchHHHHHHHhcCCCHHHHHHHHHHhcCCCCCccccc
Confidence 543 444222 2 123478999999999999999999998752 23477887777665 33
Q ss_pred CCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHH---HHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEE
Q 009868 351 TGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHI---ARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLR 427 (523)
Q Consensus 351 ~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l---~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~ 427 (523)
++|++|+|||+|+|+|+|||++||+|+||+..|+++|| +||++|||||++|++++.|++ .|.+ +++|+
T Consensus 377 ~~gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~-~g~~--------~~~i~ 447 (554)
T 3l0q_A 377 TNDIHMLPYFHGNRSPRANPNLTGIITGLKLSTTPEDMALRYLATIQALALGTRHIIETMNQ-NGYN--------IDTMM 447 (554)
T ss_dssp GTTCCEECCTTCBCSSSCBTTCCCEECSCCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCC--------CCEEE
T ss_pred cCceEEcccccCCCCCCCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC--------CCEEE
Confidence 68999999999999999999999999999999999999 889999999999999999987 5777 89999
Q ss_pred EecCccccHHHHHHHHhhcCCceeecCCCCccHHHHHHHHHHhccccCChhHHhcccCCCCCcEEeC-CCCHHHHH-HHH
Q 009868 428 VDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFDSGERTKTSTTFKP-VLNEEFRK-KKA 505 (523)
Q Consensus 428 ~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~~~G~~~~~~~a~~~~~~~~~~~~~P-~~~~~~~~-~~y 505 (523)
++||++||++|+||+||+||+||++++..|++|+|||++|++++|.|+|+++++++++ +..++|+| ++++++.| ++|
T Consensus 448 ~~GG~aks~~~~Qi~ADv~g~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~a~~~~~-~~~~~~~P~~~~~~~~Y~~~y 526 (554)
T 3l0q_A 448 ASGGGTKNPIFVQEHANATGCAMLLPEESEAMLLGSAMMGTVAAGVFESLPEAMAAMS-RIGKTVTPQTNKIKAYYDRKY 526 (554)
T ss_dssp EESGGGGCHHHHHHHHHHHCCEEEEESCSCHHHHHHHHHHHHHTTSSSSHHHHHHHHC-CEEEEECCCCHHHHHHHHHHH
T ss_pred EeCccccCHHHHHHHHHhhCCeEEecCCCcchHHHHHHHHHHHcCCcCCHHHHHHHhc-CCCcEEeCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999867776 56789999 99988877 679
Q ss_pred HHHHHHHHHHhchh
Q 009868 506 ESWCRAVERTFNLA 519 (523)
Q Consensus 506 ~~~~~~~~~~~~~~ 519 (523)
++|+++|+.++++.
T Consensus 527 ~~y~~l~~~~~~~~ 540 (554)
T 3l0q_A 527 RVFHQMYHDHMRYQ 540 (554)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988763
No 16
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=100.00 E-value=2.3e-90 Score=746.06 Aligned_cols=475 Identities=16% Similarity=0.202 Sum_probs=415.5
Q ss_pred CCceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCC----CCeE-------EeCHHH-HHHHHHHHHHHHHHHHhh
Q 009868 5 KEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPE----AGWV-------EHEPME-ILESVRVCMAKALDKATA 72 (523)
Q Consensus 5 ~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~----~g~~-------e~d~~~-~~~~~~~~l~~~~~~~~~ 72 (523)
.++|+||||+|||++|++|||.+|+++++.+.+++..+|. +||+ ||||++ ||+++..+++ .+.+
T Consensus 8 ~~~~~lgID~GTts~Ka~l~d~~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~-~l~~--- 83 (538)
T 4bc3_A 8 PRRCCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILE-KMKA--- 83 (538)
T ss_dssp -CCEEEEEEECSSEEEEEEEETTCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHH-HHHH---
T ss_pred CCCEEEEEEEcCcCEEEEEECCCCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHH-HHHH---
Confidence 4579999999999999999999999999999999877775 7775 678875 6666555444 4444
Q ss_pred CCCCcccCceEEEEccccceeEEeeCCCCc--------------------cccccccccccCCHHHHHHHHHhCCCChHH
Q 009868 73 DGHNVDSGLKAIGLTNQRETTVLWSKSTGC--------------------PLYNAIVWMDARTSSVCRKLEKELPGGKTH 132 (523)
Q Consensus 73 ~~~~~~~~I~aIgis~~~~~~v~~d~~~g~--------------------~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~ 132 (523)
.++++.+ |.+||||+|||++|+||+ +|+ |++|+|+|+|.|+.++++++.+.+ +..++
T Consensus 84 ~~~~~~~-I~aIgis~q~~~~v~~D~-~g~~~l~~l~~~~~l~~~~~~~~pl~~ai~W~D~R~~~~~~~l~~~~-~~~~~ 160 (538)
T 4bc3_A 84 SGFDFSQ-VLALSGAGQQHGSIYWKA-GAQQALTSLSPDLRLHQQLQDCFSISDCPVWMDSSTTAQCRQLEAAV-GGAQA 160 (538)
T ss_dssp TTCCGGG-EEEEEEEECSSCEEEEET-THHHHHHTCCTTSCHHHHHTTCBSCSEEECTTCCCCHHHHHHHHHHH-TSHHH
T ss_pred cCCChHH-eEEEEecccceeEEEECC-CccccccccccccchhhhccccccccCCcccccCcHHHHHHHHHHhh-CcHHH
Confidence 5677788 999999999999999998 654 999999999999999999999875 34678
Q ss_pred HHHHhCCCCCccChHHHHHHHhhcChHHHHHHhcCCceeeChhHHHHHhhcCCCCCceeE-eecchhcccccccCCCCCC
Q 009868 133 FLEAVGLPISTYFSAVKLLWMMENVDAVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHV-TDVSNASRTMLMNLKTLDW 211 (523)
Q Consensus 133 ~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~~~~~~~~~~~~d~l~~~LTG~~~~~~~~-~d~s~As~tgl~d~~~~~W 211 (523)
++++||+++++.|+++||+|+++|+||+|+++++ |++++|||.|+||| +.+ +|+|+||+|+|||+++++|
T Consensus 161 ~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~~----~~~~~d~l~~~LTG-----~~~~td~s~As~t~l~d~~~~~W 231 (538)
T 4bc3_A 161 LSCLTGSRAYERFTGNQIAKIYQQNPEAYSHTER----ISLVSSFAASLFLG-----SYSPIDYSDGSGMNLLQIQDKVW 231 (538)
T ss_dssp HHHHHSSCCCTTSHHHHHHHHHHHCHHHHHTEEE----EEEHHHHHHHHHHT-----SCCCCBHHHHTTSSCEETTTTEE
T ss_pred HHHHHCCCCccccHHHHHHHHHHcCHHHHHHhhe----EEcHHHHHHHHHhC-----CCcccccchhhcccccccccCCC
Confidence 9999999999999999999999999999999986 89999999999999 666 9999999999999999999
Q ss_pred CHHHHhhcCCC-CCCCCCcccCCcccccccc------CCCCCCCcEEEeccchhhhhhcCCCCCCCeEEEecCceeeeee
Q 009868 212 DKPTLETLGIP-AEILPKIVSNSEIIGKIGK------GWPITGIPISGCLGDQHAAMLGQACKKGEAKSTYGTGAFILMN 284 (523)
Q Consensus 212 ~~~ll~~~gi~-~~~LP~i~~~~~~~G~v~~------~~l~~g~pV~~g~gD~~aa~~g~g~~~g~~~~~~GTs~~~~~~ 284 (523)
++++|+.+|++ .++||+|+++++++|+++. | |++|+||++|++|++|+++|++.++|++++++|||+++.++
T Consensus 232 ~~~ll~~~gi~~~~~LP~i~~~~~~~G~l~~~~a~~~G-l~~g~pV~~g~~D~~aa~~g~~~~~g~~~~s~GTs~~~~~~ 310 (538)
T 4bc3_A 232 SQACLGACAPHLEEKLSPPVPSCSVVGAISSYYVQRYG-FPPGCKVVAFTGDNPASLAGMRLEEGDIAVSLGTSDTLFLW 310 (538)
T ss_dssp CHHHHHHHCTTHHHHHCCCBCSSCEEEECCHHHHHHHC-CCTTCEEECCEEHHHHHHHHTTCCTTCEEEEESSSEEEEEE
T ss_pred CHHHHHHhCccHHHHCCCcccccccccccCHHHHHHhC-CCCCCeEEEecccHHhhhhccccCCCcEEEEeccchheEEe
Confidence 99999999998 7899999999999999975 5 88999999999999999999933999999999999998777
Q ss_pred cCccccccCCCceeeeeeecCCCCCceeEeccchhchhHHHHHHHHHcCCCCCHHHHHHHHHhcC-CCCceEEEcCCCCC
Q 009868 285 TGEEVVKSKHGLLSTLAFKLGPKAPTNYALEGSIAIAGAAVQWLRDSLGIISSASEIEELALQVN-STGGVYFVPAFNGL 363 (523)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~l~~~a~~~~-~~~gl~~~P~l~G~ 363 (523)
++ +|..++.+. .+++.. .++.|..+++++++|.+++|+++.++. .+|++|+++++++| +++|++|+|||.|+
T Consensus 311 ~~-~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~gg~~~~w~~~~~~~-~~~~~l~~~a~~~~~g~~gl~~lp~~~Ge 383 (538)
T 4bc3_A 311 LQ-EPMPALEGH--IFCNPV---DSQHYMALLCFKNGSLMREKIRNESVS-RSWSDFSKALQSTEMGNGGNLGFYFDVME 383 (538)
T ss_dssp ES-SCCCCSSSE--EEEETT---EEEEEEEEEEESSSHHHHHHHHHHHST-TCHHHHHHHHHTSCTTGGGCEEEEESSCC
T ss_pred cC-CCCCCCCcc--eEEeec---CCCCEEEeehhhccchHHHHHHHHhcC-CCHHHHHHHHhcCCCCCCCeEEeecCCCC
Confidence 65 466555442 344422 245699999999999999999998863 57999999999875 88999999999999
Q ss_pred CCCCCCCCCceeEE------cCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHH
Q 009868 364 FAPWWRDDARGVCI------GITRFTSKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNL 437 (523)
Q Consensus 364 r~P~~~~~arg~~~------gl~~~~~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~ 437 (523)
|+|+ ++|.|. |++. |+++||+||++|||||++|++++.|++ .+.+ +++|+++||++||++
T Consensus 384 r~P~----~~G~~~~~~~~~g~~~-~~~~~l~RAvlEgia~~~r~~~~~l~~-~g~~--------~~~i~~~GGga~s~~ 449 (538)
T 4bc3_A 384 ITPE----IIGRHRFNTENHKVAA-FPGDVEVRALIEGQFMAKRIHAEGLGY-RVMS--------KTKILATGGASHNRE 449 (538)
T ss_dssp SSSC----CCEEEEECTTSCEESC-CCHHHHHHHHHHHHHHHHHHHHHHTTC-CCCT--------TCCEEEEEGGGGCHH
T ss_pred cCCC----CCceeeeccccccccC-CCHHHHHHHHHHHHHHHHHHHHHHhhh-cCCC--------CCeEEEEcchhcCHH
Confidence 9997 455554 2343 899999999999999999999999875 4666 899999999999999
Q ss_pred HHHHHHhhcCCceeecCCCCccHHHHHHHHHHhccc--cCChhHHhcccCCCCCcEEeCCCCHHHHH-HHHHHHHHHHHH
Q 009868 438 LMQIQADLLGSPVIRPADIETTALGAAFAAGLAIGV--FKEEEIFDSGERTKTSTTFKPVLNEEFRK-KKAESWCRAVER 514 (523)
Q Consensus 438 ~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~~~G~--~~~~~~a~~~~~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~ 514 (523)
|+||+||+||+||+++...|++|+|||++|++++|. |+|++++++.+. +..++|+|++++++.| ++|++|+++|++
T Consensus 450 ~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~ea~~~~~-~~~~~~~P~~~~~~~Y~~~y~~y~~l~~~ 528 (538)
T 4bc3_A 450 ILQVLADVFDAPVYVIDTANSACVGSAYRAFHGLAGGTDVPFSEVVKLAP-NPRLAATPSPGASQVYEALLPQYAKLEQR 528 (538)
T ss_dssp HHHHHHHHHTSCEEECCCTTHHHHHHHHHHHHHHHTGGGSCHHHHHTTSC-CCEEEECCCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCceEecCCCCchHHHHHHHHHHHhCcccCCCHHHHHHhhc-CCCeeECCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 899999877765 5678999999998877 679999999999
Q ss_pred Hhch
Q 009868 515 TFNL 518 (523)
Q Consensus 515 ~~~~ 518 (523)
++..
T Consensus 529 ~~~~ 532 (538)
T 4bc3_A 529 ILSQ 532 (538)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 17
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=100.00 E-value=1.3e-88 Score=727.30 Aligned_cols=458 Identities=20% Similarity=0.278 Sum_probs=403.7
Q ss_pred CceEEEEecCCCCceEEEEc-CCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEE
Q 009868 6 EVFIGAIDQGTTSTRFIIYD-HQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAI 84 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d-~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aI 84 (523)
++|+||||+|||++|++||| ++|+++++.+.++ +||+||||++||++++++++++ +. .++ |.+|
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~i~~~~~~~~------~g~~e~d~~~~~~~i~~~l~~~-------~~-~~~-I~~I 68 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGELVRFGQAKH------PNGTSVDPSYWWSAFQEAAEQA-------GG-LDD-VSAL 68 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------CSSSEECTHHHHHHHHHHHHHT-------TC-STT-EEEE
T ss_pred CcEEEEEEeccccEEEEEEECCCCeEEEEEEEeC------CCCceECHHHHHHHHHHHHHhc-------CC-ccC-ceEE
Confidence 45899999999999999999 8999999988775 4889999999999988877653 22 367 9999
Q ss_pred EEccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCC-h--------------HHHHHHhCCCCCccChHHH
Q 009868 85 GLTNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGG-K--------------THFLEAVGLPISTYFSAVK 149 (523)
Q Consensus 85 gis~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~-~--------------~~~~~~tG~~~~~~~~~~k 149 (523)
||++|++++++||+ +|+|++|+|+|+|.|+.++++++.+.+ +. . ++++++||+++++.++++|
T Consensus 69 gis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~k 146 (515)
T 3i8b_A 69 AVGGQQHGMVILDN-QGNVIRDAMLWNDTSSAPQAAALIEKL-GAAPAQDGEPEDPIARGKQRWVKAVGSSPVASYTLTK 146 (515)
T ss_dssp EEEECSSCBEEECT-TSCBCSCEECTTCCTTHHHHHHHHHHH-HCSCCCTTCCSSHHHHHHHHHHHHHSSCCCTTSHHHH
T ss_pred EEeCCcceEEEECC-CCCCcCCcceecCCCHHHHHHHHHHhc-CcccccccccccccchhHHHHHHHHCCCCCchhHHHH
Confidence 99999999999998 899999999999999999999999875 12 1 7899999999999999999
Q ss_pred HHHHhhcChHHHHHHhcCCceeeChhHHHHHhhcCCC--------CCceeEeecchhcccccccCCCCCCCHHHHhhc-C
Q 009868 150 LLWMMENVDAVKEAIKKGDALFGTIDTWLIWNLTGGV--------NGGLHVTDVSNASRTMLMNLKTLDWDKPTLETL-G 220 (523)
Q Consensus 150 l~wl~~~~pe~~~~~~~~~~~~~~~~d~l~~~LTG~~--------~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~-g 220 (523)
|+|+++|+||+|+++++ |++++|||.|+|||+. ++.++++|+|+||+|+|||+++++|++++|+.+ |
T Consensus 147 l~Wl~~~~Pe~~~~~~~----~l~~~dyl~~~LTG~~~~~~~~~~~~~~~~td~s~As~t~l~d~~~~~W~~~ll~~~~g 222 (515)
T 3i8b_A 147 VAWVAENEPENVKKIAA----ICLPHDWLSWRIAGYGPVAEGEDAHLEALFTDRSDASGTIYYDAASNEYRRDLIAMVLE 222 (515)
T ss_dssp HHHHHHHCHHHHTTCSE----EECHHHHHHHHHTTCCCCCTTSCCCGGGCEEEHHHHTTSSSEETTTTEECHHHHHHHHH
T ss_pred HHHHHHcChHHHHHHhe----ecCHHHHHHHHhcCCCcccccccccccceeecHHHhhcccCeeCCcCccCHHHHHhhcC
Confidence 99999999999999875 8999999999999930 000169999999999999999999999999998 9
Q ss_pred CC-----------CCCCCCcccCCccccccccCC-----CCCCCcEEEeccchhhhhhcCCCCCCCeEEEecCceeeeee
Q 009868 221 IP-----------AEILPKIVSNSEIIGKIGKGW-----PITGIPISGCLGDQHAAMLGQACKKGEAKSTYGTGAFILMN 284 (523)
Q Consensus 221 i~-----------~~~LP~i~~~~~~~G~v~~~~-----l~~g~pV~~g~gD~~aa~~g~g~~~g~~~~~~GTs~~~~~~ 284 (523)
|+ .++||+|+++++++|+++..+ |++|+||++|++|++|+++|+|.++|++++++|||+++.+.
T Consensus 223 i~~~~~~~~~~~~~~~LP~i~~~~~~~G~v~~~~A~~~Gl~~g~pV~~g~~D~~aa~lG~g~~~g~~~~s~GTs~~~~~~ 302 (515)
T 3i8b_A 223 AAEGAKAAQSHAEAIVLPTVLGPRDAAPVKADPAIAGKNVEGGCLLAPGGGDNAMASLGLGMAVGDVSISLGTSGVAAAI 302 (515)
T ss_dssp HHHCHHHHHHHHHHSBCCEEECTTCCCSSCCCTTTTTTTSTTCCEECCCEEHHHHHHHHTTCCTTEEEEEESSSEEEEEC
T ss_pred CCcccccccccchHHHCCCCcCCcCcccCcCHHHHHHhCCCCCCeEEEECchHHHHHhhCCCCCCcEEEEechhhhhhcc
Confidence 98 789999999999999997542 78899999999999999999998899999999999988765
Q ss_pred cCccccccCCCceeeeeeecCCCCCceeEeccchhchhHHHHHHHHHcCCCCCHHHHHHHHHhc-CCCCceEEEcCCCCC
Q 009868 285 TGEEVVKSKHGLLSTLAFKLGPKAPTNYALEGSIAIAGAAVQWLRDSLGIISSASEIEELALQV-NSTGGVYFVPAFNGL 363 (523)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~l~~~a~~~-~~~~gl~~~P~l~G~ 363 (523)
+ ++|..++.+.+..+++ .++.|+.++++.++|.+++|+++.++. +|++++++++++ |+++|++|+|||.|+
T Consensus 303 ~-~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~gg~~l~w~~~~~~~--~~~~l~~~a~~~~~g~~gl~~lP~~~Ge 374 (515)
T 3i8b_A 303 S-ENPTYDLTGAVSGFAD-----CTGHYLPLACTINGSRILDAGRAALGV--DYDELAKLAFASKPGANGITLVPYFDGE 374 (515)
T ss_dssp B-SSCCCCTTSCSEEEEC-----SSSSEEEEEEESCSTHHHHHHHHHHTC--CHHHHHHHHHHSCTTGGGCEEECCTTCB
T ss_pred c-CccccCCCCcEEeeec-----CCCCEEEeeecccHHHHHHHHHHHhCC--CHHHHHHHHHhCCCCCCCeEEecCCCCC
Confidence 5 4567666666655543 257799999999999999999998875 699999999988 588999999999999
Q ss_pred CCCCCCCCCceeEEcCCCCC-CHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHH
Q 009868 364 FAPWWRDDARGVCIGITRFT-SKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQ 442 (523)
Q Consensus 364 r~P~~~~~arg~~~gl~~~~-~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~ 442 (523)
|+|+| |++||+|+||+..| +++||+||++|||||++|++++.|++ .|.+ +++|+++||++||++|+||+
T Consensus 375 r~P~~-~~arg~~~Gl~~~~~~~~~l~RAvlEgia~~~r~~l~~l~~-~g~~--------~~~i~~~GGgaks~~~~Qi~ 444 (515)
T 3i8b_A 375 RTPNR-PNATATFSGMTLANTTRENLARAFVEGLLCSQRDCLELIRS-LGAS--------ITRILLIGGGAKSEAIRTLA 444 (515)
T ss_dssp TTTTB-TTCCCEEESCCTTTCSHHHHHHHHHHHHHHHHHHHHHHHHH-TTCC--------CCEEEEESGGGGCHHHHHHH
T ss_pred cCCCC-cCcceEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC--------CCEEEEECchhcCHHHHHHH
Confidence 99976 99999999999999 99999999999999999999999987 6877 89999999999999999999
Q ss_pred HhhcCCceeecCCCCccHHHHHHHHHHhccccCChhHHhcccCCCCCcEEeCCCCHHHHHHHHHH
Q 009868 443 ADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFDSGERTKTSTTFKPVLNEEFRKKKAES 507 (523)
Q Consensus 443 Advlg~pv~~~~~~e~~alGaA~lA~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~y~~ 507 (523)
||+||+||+++...|++|+|||++|++++|.++++.+. ......+|+|+++. +..++|++
T Consensus 445 ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~ 504 (515)
T 3i8b_A 445 PSILGMDVTRPATDEYVAIGAARQAAWVLSGETEPPAW----QLTIDGVETGEPTE-AVYEAYAK 504 (515)
T ss_dssp HHHHTSCEEEECCCCHHHHHHHHHHHHHHHCCSSCCCC----CCCEEEEECCCCCH-HHHHHHHH
T ss_pred HHHhCCceEecCCcccHHHHHHHHHHHHcCCCCChhHh----hhhccccCCCCccH-HHHHHHHH
Confidence 99999999999999999999999999999998886533 22346788999983 44444443
No 18
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=4.9e-82 Score=669.51 Aligned_cols=443 Identities=15% Similarity=0.141 Sum_probs=365.0
Q ss_pred CcccCCceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccC
Q 009868 1 MAKAKEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSG 80 (523)
Q Consensus 1 m~~~~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 80 (523)
|+.| ++|+||||+|||++|+++||.+|+++++.+++++. +|.+||+||||++||+++++++++++ + .+
T Consensus 1 m~~m-m~~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~~~-~~~~g~~eqdp~~~~~~~~~~i~~~~-~--------~~- 68 (482)
T 3h6e_A 1 MSLS-TGATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIP-LEIDGIRRLDAPDTGRWLLDVLSRYA-D--------HP- 68 (482)
T ss_dssp --------CEEEEECSSEEEEEEECTTSCEEEEEEEECCC-EESSSCEECCHHHHHHHHHHHHHHTT-T--------SC-
T ss_pred Cchh-hceEEEEEcCCCCeEEEEEECCCcEEEEEEecCCc-ccCCCceeECHHHHHHHHHHHHHHHH-h--------cC-
Confidence 6666 46899999999999999999999999999999985 68999999999999999999998875 3 36
Q ss_pred ceEEEEccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCcc--ChHHHHHHHhhcCh
Q 009868 81 LKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTY--FSAVKLLWMMENVD 158 (523)
Q Consensus 81 I~aIgis~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~--~~~~kl~wl~~~~p 158 (523)
|.+|||++|++++++|| +|+|++|+|+|+|.|+.++++++.+.. + .+++||++++++ ++++||+|+++|+|
T Consensus 69 I~aIgis~~~~~~v~~D--~G~pl~~ai~w~D~R~~~~~~~l~~~~--~---~~~~tG~~~~~~~~~~~~kl~Wl~~~~P 141 (482)
T 3h6e_A 69 VTTIVPVGHGAGIAALT--DGRLAFPPLDYEQSIPEAVMADYRSQR--D---PFARTGSPALPDGLNIGSQLWWLDQLHP 141 (482)
T ss_dssp CCEEEEEECSSCEEEEE--TTEECSCCBCTTSCCCHHHHHHHHTTC--C---CHHHHCCCCCSTTSSHHHHHHHHHHHSH
T ss_pred CCEEEEecCcCCEEEEC--CCCEeccccccCCcccHHHHHHHHhhC--h---HHHHhCCCCCCCchhHHHHHHHHHHcCc
Confidence 99999999999999999 699999999999999999999998763 2 279999999997 89999999999999
Q ss_pred HHHHHHhcCCceeeChhHHHHHhhcCCCCCceeEeecch-hcccccccCCCCCCCHHHHhhcCCCCCCCCCcccCCcccc
Q 009868 159 AVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSN-ASRTMLMNLKTLDWDKPTLETLGIPAEILPKIVSNSEIIG 237 (523)
Q Consensus 159 e~~~~~~~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~-As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G 237 (523)
|+|++++ |++++|||.|+||| ++++|+|+ ||+|+|||+++++|+ ++|+.+||+ ++||+|+++++++|
T Consensus 142 e~~~~~~-----~l~~~dyl~~~LTG-----~~~td~s~~As~t~l~d~~~~~W~-~ll~~~gi~-~~LP~v~~~~~~~G 209 (482)
T 3h6e_A 142 DVMANAT-----LLPWAQYWAWFLTG-----RAVSEVTSLGCHSDLWDPQDGDFS-PMAKRLGWA-ARFAPIVRAGDTVG 209 (482)
T ss_dssp HHHHSCE-----EEEHHHHHHHHTTS-----CCCEEHHHHTTTCSSEETTTTEEC-HHHHHTTCG-GGBCCEECTTSEEE
T ss_pred hhhhcCE-----EEccHHHHHHHHhC-----CeeeecchhhhccCCccCCcCcHH-HHHHHcCCH-HhCCCCcCCCceee
Confidence 9999873 88899999999999 88999998 899999999999999 599999998 99999999999999
Q ss_pred cccc------CCCCCCCcEEEeccchhhhhhc---CCC-CCCC-eEEEecCceeeeeecCc---c-ccccC-CCceeeee
Q 009868 238 KIGK------GWPITGIPISGCLGDQHAAMLG---QAC-KKGE-AKSTYGTGAFILMNTGE---E-VVKSK-HGLLSTLA 301 (523)
Q Consensus 238 ~v~~------~~l~~g~pV~~g~gD~~aa~~g---~g~-~~g~-~~~~~GTs~~~~~~~~~---~-~~~~~-~~~~~~~~ 301 (523)
+++. | |++|+||++|++|++|+++| +|+ ++|+ +++++|||.++. ++.+ + |..++ .+++ +
T Consensus 210 ~l~~~~A~~~G-L~~g~pV~~g~~D~~aa~lG~~g~g~~~~g~~~~~s~GT~~~~~-~~~~~~~~~~~~~~~~~~~---~ 284 (482)
T 3h6e_A 210 ALLPAIAERTG-LSPDVQVLAGLHDSNAALLAARGFAEIADNEATVLSTGTWFIAM-RLPATPVDTATLPEARDCL---V 284 (482)
T ss_dssp ECCHHHHHHHT-CCTTCEEECCEEHHHHHHHHHTTSTTTTTSSEEEEECSSSEEEE-EECSSCCCGGGCCGGGTEE---E
T ss_pred eeCHHHHHHhC-CCCCCEEEEeCcHHHHHHhhhhccCCcCCCCEEEEECCceeEEE-EecCccCCccccchhhcee---e
Confidence 9974 5 88999999999999999999 999 9997 589999997753 3433 3 33332 2332 1
Q ss_pred eecCCCCCceeEeccchhchhHHHHHHHHHcCCCCC--HHHHHHHHHhc-CCCCceEEEcCCCCCCCCCCCCCCceeEEc
Q 009868 302 FKLGPKAPTNYALEGSIAIAGAAVQWLRDSLGIISS--ASEIEELALQV-NSTGGVYFVPAFNGLFAPWWRDDARGVCIG 378 (523)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~G~~l~w~~~~~~~~~~--~~~l~~~a~~~-~~~~gl~~~P~l~G~r~P~~~~~arg~~~g 378 (523)
+.. ...|.+++...++|.+++|+++......+ ++..+..+... ++++|++|+|||+|+|+|+||+ ||+|+|
T Consensus 285 ~~~----~~~~~~~g~~~~~G~~~~w~~~~~~~~~~~~~~~~~~~a~~~~~g~~Gl~flP~l~Ger~P~~d~--rG~~~G 358 (482)
T 3h6e_A 285 NVD----VHGRPVPSARFMGGREIETLIEIDTRRVDIKPDQPALLAAVPEVLRHGRMILPTLMRGFGPYPHG--RFAWIN 358 (482)
T ss_dssp EEC----TTSCEEEEEEECHHHHHHHHHCSGGGCTTCGGGHHHHHHTHHHHHHTTCEEESCSSTTCSSCTTC--CCEEES
T ss_pred ccc----cccccccchhhhhHHHHHHHHHhcccccccccchhhHHHhccccCCCCeEEecCCCCCCCCCCCC--ceEEeC
Confidence 211 12356677778899999999764432211 23333333322 5889999999999999999987 999999
Q ss_pred CCCCCCHHHHHHHHHhh--hhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhh-cCCceeecCC
Q 009868 379 ITRFTSKAHIARAVLES--MCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADL-LGSPVIRPAD 455 (523)
Q Consensus 379 l~~~~~~~~l~rAv~Eg--ia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Adv-lg~pv~~~~~ 455 (523)
|+. +|++||++|+ |||++|++++.|++ .++|+++||++||++|+||+||| ||+||++++.
T Consensus 359 l~~----~~l~RA~lE~~Gia~~~r~~l~~~~~-------------~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~~ 421 (482)
T 3h6e_A 359 RPE----DWFERRAAACLYAALVADTALDLIGS-------------TGRILVEGRFAEADVFVRALASLRPDCAVYTANA 421 (482)
T ss_dssp CCS----SHHHHHHHHHHHHHHHHHHHHHHTTC-------------CSEEEEESGGGGCHHHHHHHHHHSTTSEEEEESS
T ss_pred CCH----HHHHHHHHHHHhHHHHHHHHHHHhcC-------------CCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcCC
Confidence 998 7999999995 99999999998853 46899999999999999999999 9999999999
Q ss_pred CCccHHHHHHHHHHhccccCChhHHhcccCCCCCcEEeCCCC---HHHHHHHHHHHHHHHHHH
Q 009868 456 IETTALGAAFAAGLAIGVFKEEEIFDSGERTKTSTTFKPVLN---EEFRKKKAESWCRAVERT 515 (523)
Q Consensus 456 ~e~~alGaA~lA~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~---~~~~~~~y~~~~~~~~~~ 515 (523)
.|++|+|||++|+++.-. .....+.|... ...+.+.+++|+++++.-
T Consensus 422 ~e~~alGAA~lA~~a~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 471 (482)
T 3h6e_A 422 HNDVSFGALRLIDPGLRP-------------QGELVRIEPLDTGSWADLDTYRNRWQAEVEAA 471 (482)
T ss_dssp CCCTTGGGHHHHCTTCCC-------------SSCEEECCCCCC----CHHHHHHHHHHHHC--
T ss_pred CchHHHHHHHHhCccccc-------------ccccCcccccccccchHHHHHHHHHHHHhhcC
Confidence 999999999999987311 12344555554 123445577899887663
No 19
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=100.00 E-value=9.3e-82 Score=673.47 Aligned_cols=465 Identities=19% Similarity=0.228 Sum_probs=382.0
Q ss_pred cCCceEEEEecCCCCceEEEEcCCCCEEEEEEeeee----eccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCccc
Q 009868 4 AKEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFT----QFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDS 79 (523)
Q Consensus 4 ~~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~----~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 79 (523)
|.++++||||+|||++|++|+|.+|+++...+.++. ..+|.+||.|||+++||+++.++++++... ..+
T Consensus 1 m~~~~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~-------~~~ 73 (489)
T 2uyt_A 1 MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAA-------GIA 73 (489)
T ss_dssp -CCEEEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHT-------TCC
T ss_pred CCcceEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhC-------CCC
Confidence 345689999999999999999999998887766554 235789999999999999999999887642 247
Q ss_pred CceEEEEccccceeEEeeCCCCccccccccccccCCHHHHHHHHHhCCCChHHHHHHhCCCCCccChHHHHHHHhhcChH
Q 009868 80 GLKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARTSSVCRKLEKELPGGKTHFLEAVGLPISTYFSAVKLLWMMENVDA 159 (523)
Q Consensus 80 ~I~aIgis~~~~~~v~~d~~~g~~l~~~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe 159 (523)
|.+|||++||+++++||+ +|+|++|+|.|+|.|+.++++++.+.. +.++++++||+++++.++++||+|+++|+||
T Consensus 74 -i~~Igis~q~~~~v~~D~-~G~~l~~~i~w~D~R~~~~~~~l~~~~--~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~P~ 149 (489)
T 2uyt_A 74 -IDSIGIDTWGVDFVLLDQ-QGQRVGLPVAYRDSRTNGLMAQAQQQL--GKRDIYQRSGIQFLPFNTLYQLRALTEQQPE 149 (489)
T ss_dssp -CCEEEEEECSSCEEEECT-TSCEESCCBCTTCGGGTTHHHHHHHHH--CHHHHHHHHCCCCCTTSHHHHHHHHHHHCGG
T ss_pred -ceEEEEecCcccEEEECC-CCCCccCCccccCCccHHHHHHHHHhc--CHHHHHHHhCCCCCCccHHHHHHHHHhcCch
Confidence 999999999999999999 799999999999999999999998874 4578999999999999999999999999999
Q ss_pred HHHHHhcCCceeeChhHHHHHhhcCCCCCceeEeecchhcccccccCCCCCCCHHHHhhcCCCCCCCCCcccCCcccccc
Q 009868 160 VKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEILPKIVSNSEIIGKI 239 (523)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v 239 (523)
+|+++++ ++.++|||.|+||| ++++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|++
T Consensus 150 ~~~~~~~----~l~~~dyl~~~LTG-----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~ 220 (489)
T 2uyt_A 150 LIPHIAH----ALLMPDYFSYRLTG-----KMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHW 220 (489)
T ss_dssp GGGGCCE----EEEHHHHHHHHHHS-----CCCCBHHHHGGGTCEETTTTEECHHHHHHHTCCGGGSCCCBCTTCEEEEE
T ss_pred HHHHhhh----ccCcHHHHHHHHhC-----CccceehhhhhhcccccCcCccCHHHHHHcCCCHHHCCCccCCCcceeee
Confidence 9999875 88899999999999 89999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCcEEE-eccchhhhhhcCCC-CCCCeEEEecCceeeeeecCccccccCCCceeeeeeecCCCCCceeEeccc
Q 009868 240 GKGWPITGIPISG-CLGDQHAAMLGQAC-KKGEAKSTYGTGAFILMNTGEEVVKSKHGLLSTLAFKLGPKAPTNYALEGS 317 (523)
Q Consensus 240 ~~~~l~~g~pV~~-g~gD~~aa~~g~g~-~~g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (523)
+.. ..+|+||++ |++|++|+++|+|+ ++|++++++|||+++...++ .|..++..+...+.+. +..++.|.+++.
T Consensus 221 ~~~-~~~g~pV~~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 296 (489)
T 2uyt_A 221 ICP-QGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQ-TPFTNDTALAANITNE--GGAEGRYRVLKN 296 (489)
T ss_dssp ECT-TCCEEEEECCCCBHHHHHHHHSCCCSTTEEEEEESSSEEEEEEES-SCCCSHHHHHHTCEEE--CCGGGCEEEEEE
T ss_pred ecc-cCCCCcEEEECchHHHHHHhcCCCCCCCcEEEEEchHhhcccccC-CCccCHHHHhhcceee--cCCCCeEEEehh
Confidence 643 337899998 88999999999999 99999999999998765553 3433321111111111 123678888877
Q ss_pred hhchhHHHHHHHHHcCC---CCCHHHHHHHHHhcCCCCceEEEcCCCCCCCCCCCCC-----CceeEEcC--CCCCCHHH
Q 009868 318 IAIAGAAVQWLRDSLGI---ISSASEIEELALQVNSTGGVYFVPAFNGLFAPWWRDD-----ARGVCIGI--TRFTSKAH 387 (523)
Q Consensus 318 ~~~~G~~l~w~~~~~~~---~~~~~~l~~~a~~~~~~~gl~~~P~l~G~r~P~~~~~-----arg~~~gl--~~~~~~~~ 387 (523)
+. | .|+++.+.. .+.|+++.+.++..|++++ +|+| ++.|+|+|+ .+|.|.|+ +..|+++|
T Consensus 297 ~~--g---~W~~~~~~~~~~~~~~~~l~~~a~~~~~~~~-l~~p----~~~~~~~p~~~~~~~~g~~~g~~~~~~~t~~~ 366 (489)
T 2uyt_A 297 IM--G---LWLLQRVLQERQINDLPALIAATQALPACRF-IINP----NDDRFINPDEMCSEIQAACREMAQPIPESDAE 366 (489)
T ss_dssp EC--T---THHHHHHHHHTTCCCHHHHHHHHTTSCSSSS-CCCT----TSGGGSSCSCHHHHHHHHHHHTTCCCCCSHHH
T ss_pred Hh--H---HHHHHHhhcccchhhHHHHHHHhccCCCcCe-eECC----CCCccCChhhhHHHHHHHHHhcCCCCCCCHHH
Confidence 54 2 588876521 2457777776644567654 4788 477888887 48899888 47899999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHHHHHHHH
Q 009868 388 IARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAFAA 467 (523)
Q Consensus 388 l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA 467 (523)
|+||++|||||++|++++.|++..|.+ +++|+++||++||++|+||+||+||+||+++. .|++++|||++|
T Consensus 367 l~RAvlEgia~~~r~~~~~l~~~~g~~--------~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~-~e~~alGaa~~A 437 (489)
T 2uyt_A 367 LARCIFDSLALLYADVLHELAQLRGED--------FSQLHIVGGGCQNTLLNQLCADACGIRVIAGP-VEASTLGNIGIQ 437 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCC--------CSEEEEESGGGGCHHHHHHHHHHHTSEEEECC-TTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--------CCEEEEeCChhhhHHHHHHHHHHHCCeeecCC-ccHhHHHHHHHH
Confidence 999999999999999999998766777 89999999999999999999999999999876 799999998888
Q ss_pred HHhcccc---CChhHHhcccCCCCCcEEeCCCCHH-HHH-HHHHHHHHHHH
Q 009868 468 GLAIGVF---KEEEIFDSGERTKTSTTFKPVLNEE-FRK-KKAESWCRAVE 513 (523)
Q Consensus 468 ~~~~G~~---~~~~~a~~~~~~~~~~~~~P~~~~~-~~~-~~y~~~~~~~~ 513 (523)
+.|.+.. +++.++++.+. ..++|+|+++++ +.| +.|++|+++.+
T Consensus 438 ~~a~~~~~~~~~~~~~~~~~~--~~~~~~P~~~~~~~~Y~~~~~~y~~~~~ 486 (489)
T 2uyt_A 438 LMTLDELNNVDDFRQVVSTTA--NLTTFTPNPDSEIAHYVALIHSTRQTKE 486 (489)
T ss_dssp HHHTTSCCCHHHHHHHHHHHS--CCEEECCCTTSHHHHHHHHTTC------
T ss_pred HHHcCccccHHHHHHHHHhhC--CCeEECCCcchHHHHHHHHHHHhhchhh
Confidence 7777654 44455555553 258999999988 776 45777776544
No 20
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.76 E-value=8e-18 Score=164.93 Aligned_cols=125 Identities=18% Similarity=0.116 Sum_probs=101.5
Q ss_pred hhHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCceEEEcCCCCCCCCCCCCCCceeEEcCC-CCCCHHHHHHHHHhhhhhH
Q 009868 321 AGAAVQWLRDSLGIISSASEIEELALQVNSTGGVYFVPAFNGLFAPWWRDDARGVCIGIT-RFTSKAHIARAVLESMCFQ 399 (523)
Q Consensus 321 ~G~~l~w~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~l~G~r~P~~~~~arg~~~gl~-~~~~~~~l~rAv~Egia~~ 399 (523)
+|..++|+.+.++. +++++++++.+.+ .|+..|+|++. .+++.++++. ..++++|++|+++|+|+++
T Consensus 131 tG~~le~~a~~lg~--~~~el~~la~~~~-------~p~~~~~~c~v---fa~s~v~~l~~~g~~~~di~~av~e~Va~~ 198 (270)
T 1hux_A 131 TGRFLDVMANILEV--KVSDLAELGAKST-------KRVAISSTCTV---FAESEVISQLSKGTDKIDIIAGIHRSVASR 198 (270)
T ss_dssp SHHHHHHHHHHHTC--CTTTHHHHHTTCC-------SCCCCCCCSHH---HHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCC--CHHHHHHHHhhCC-------CCCCcccccch---hHhHHHHHHhhCCCCHHHHHHHHHHHHHHH
Confidence 57899999998875 5788888886643 46777888863 3567777765 6889999999999999999
Q ss_pred HHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCC-ccHHHHHHHHHHh
Q 009868 400 VKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIE-TTALGAAFAAGLA 470 (523)
Q Consensus 400 ~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e-~~alGaA~lA~~~ 470 (523)
+... ++. .+. .++|+++||+++|+.|+|+++|+||+||.+++..+ ++|+|||++|+..
T Consensus 199 i~~~---~~~-~~~---------~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 199 VIGL---ANR-VGI---------VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHH---HHT-TCC---------CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHH---Hhc-CCC---------CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 8443 332 222 36799999999999999999999999999988777 6999999999764
No 21
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.91 E-value=7.6e-08 Score=94.07 Aligned_cols=127 Identities=16% Similarity=0.167 Sum_probs=82.7
Q ss_pred chhHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCceEEEcCCCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHhhhhhH
Q 009868 320 IAGAAVQWLRDSLGIISSASEIEELALQVNSTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTSKAHIARAVLESMCFQ 399 (523)
Q Consensus 320 ~~G~~l~w~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~l~G~r~P~~~~~arg~~~gl~~~~~~~~l~rAv~Egia~~ 399 (523)
.+|..++-+.+.++. +|++..+++....... | ++ .++..+- ....+.-+.....++|+++++++.++-.
T Consensus 128 g~G~f~d~~a~~l~~--~~~~~~~~~~~a~~~~-----~-i~-~~~~~f~--~s~~~~~~~~~~~~~di~a~~~~~v~~~ 196 (276)
T 4ehu_A 128 GTGRFLDVMAKIIEV--DVSELGSISMNSQNEV-----S-IS-STCTVFA--ESEVISHLSENAKIEDIVAGIHTSVAKR 196 (276)
T ss_dssp TSHHHHHHHHHHHTC--CGGGHHHHHTTCSSCC-----C-CC-CCSHHHH--HHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHhcc--ChhhhHHHHhcCCCCC-----C-cC-Cccchhh--hhHHHHhhhccccHHHHHHHHHHHHHHH
Confidence 357788877777775 5777766654432110 0 11 1110000 0000001223467899999999998766
Q ss_pred HHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecC-CCCccHHHHHHHHHHh
Q 009868 400 VKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPA-DIETTALGAAFAAGLA 470 (523)
Q Consensus 400 ~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~-~~e~~alGaA~lA~~~ 470 (523)
+.... .+. .. +++|+++||.++|+.+.+.+++.+|+++.++. ..+.+|+|||++|..-
T Consensus 197 l~~~~---~~~--~~--------~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~ 255 (276)
T 4ehu_A 197 VSSLV---KRI--GV--------QRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDE 255 (276)
T ss_dssp HHHHH---HHH--CC--------CSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHH---Hhc--cc--------CCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHH
Confidence 54432 221 12 67899999999999999999999999999987 4668899999998654
No 22
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.74 E-value=4.1e-07 Score=88.54 Aligned_cols=70 Identities=26% Similarity=0.340 Sum_probs=54.6
Q ss_pred CHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecC-CCCccHHH
Q 009868 384 SKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPA-DIETTALG 462 (523)
Q Consensus 384 ~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~-~~e~~alG 462 (523)
...++++.+++.++..++..++. .+ . ++.|+++||+++++.+.+.+++.|+.||.++. ..+++|+|
T Consensus 201 ~~~~~~~~~~~~i~~~i~~~l~~----~~-~--------~~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~~p~~a~a~G 267 (272)
T 3h1q_A 201 EIMRVVRPVIEKMALIVKEVIKN----YD-Q--------TLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLG 267 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT----SC-S--------SCCEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cC-C--------CCEEEEECCccchhhHHHHHHHHhCCCccccCChHHHHHHH
Confidence 45677777777776665554432 12 2 67899999999999999999999999998765 55789999
Q ss_pred HHHH
Q 009868 463 AAFA 466 (523)
Q Consensus 463 aA~l 466 (523)
||+.
T Consensus 268 aal~ 271 (272)
T 3h1q_A 268 IALF 271 (272)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9975
No 23
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.74 E-value=2.4e-08 Score=100.00 Aligned_cols=96 Identities=17% Similarity=0.200 Sum_probs=75.6
Q ss_pred cccCCceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCc
Q 009868 2 AKAKEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGL 81 (523)
Q Consensus 2 ~~~~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I 81 (523)
+|+|+.|+||||+|+|++|++++|.+|+++.+.+.+++. +++++++++.+.+.+++++++ .+.+..+ |
T Consensus 1 ~~~m~~~~lgiDiggt~~~~~l~d~~g~il~~~~~~~~~--------~~~~~~~~~~l~~~i~~~~~~---~~~~~~~-i 68 (326)
T 2qm1_A 1 SNAMDKKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNI--------LEDGKHIVPSIIESIRHRIDL---YNMKKED-F 68 (326)
T ss_dssp CCGGGCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCC--------TTTTTTHHHHHHHHHHHHHHH---TTCCGGG-E
T ss_pred CCCcccEEEEEEECCCEEEEEEECCCCCEEEEEEEcCCC--------CCCHHHHHHHHHHHHHHHHHH---cCCCccc-e
Confidence 366678999999999999999999999999888777652 356788999999999999877 4555668 9
Q ss_pred eEEEEccccceeEEeeCCCCccc-ccccccccc
Q 009868 82 KAIGLTNQRETTVLWSKSTGCPL-YNAIVWMDA 113 (523)
Q Consensus 82 ~aIgis~~~~~~v~~d~~~g~~l-~~~i~w~D~ 113 (523)
.+|||+.. .++|.++|..+ .|.+.|.+.
T Consensus 69 ~~igi~~p----G~vd~~~g~v~~~~~l~w~~~ 97 (326)
T 2qm1_A 69 VGIGMGTP----GSVDIEKGTVVGAYNLNWTTV 97 (326)
T ss_dssp EEEEEEES----SEEETTTTEEECBGGGTBCSC
T ss_pred eEEEEecc----cceeCCCCEEEecCCCCccCC
Confidence 99999884 47787567665 344568654
No 24
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.49 E-value=4.1e-07 Score=94.73 Aligned_cols=93 Identities=10% Similarity=0.081 Sum_probs=74.1
Q ss_pred CCceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEE
Q 009868 5 KEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAI 84 (523)
Q Consensus 5 ~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aI 84 (523)
...|++|||+|+|++|++++|.+|+++.+.+.+++ .++++++++.+.+.+++++++ .+.+..+ |.+|
T Consensus 106 ~~~~~lGIDiGgt~i~~~l~d~~G~il~~~~~~~~---------~~~~~~~~~~l~~~i~~~~~~---~~~~~~~-i~gi 172 (429)
T 1z05_A 106 LGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIH---------EIDQDDVLARLLFEIEEFFQT---YAAQLDR-VTSI 172 (429)
T ss_dssp TTEEEEEEEEETTEEEEEEEETTSCEEEEEEEECC---------CCBHHHHHHHHHHHHHHHHHH---TTTTCCE-EEEE
T ss_pred CCCEEEEEEECCCEEEEEEECCCCCEEEEEEEcCC---------CCCHHHHHHHHHHHHHHHHHh---cCCCcCc-eEEE
Confidence 45689999999999999999999999988777654 246899999999999999877 4555667 9999
Q ss_pred EEccccceeEEeeCCCCccc-cccccccccC
Q 009868 85 GLTNQRETTVLWSKSTGCPL-YNAIVWMDAR 114 (523)
Q Consensus 85 gis~~~~~~v~~d~~~g~~l-~~~i~w~D~R 114 (523)
||+.. .++|.++|..+ .|.+.|.+..
T Consensus 173 gi~~p----G~vd~~~g~v~~~~~l~w~~~~ 199 (429)
T 1z05_A 173 AITLP----GLVNSEQGIVLQMPHYNVKNLA 199 (429)
T ss_dssp EEEES----SEEETTTTEEEECSSSBCSSBC
T ss_pred EEecc----CcEeCCCCeEeecCCCCCCCCC
Confidence 99884 37787567665 3555687653
No 25
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.46 E-value=2.9e-07 Score=94.32 Aligned_cols=93 Identities=10% Similarity=0.070 Sum_probs=72.6
Q ss_pred CCceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEE
Q 009868 5 KEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAI 84 (523)
Q Consensus 5 ~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aI 84 (523)
...|++|||+|+|++|++++|.+|+++.+.+.+++ .+++++++++.+.+.+++++++. +.+..+ |.+|
T Consensus 85 ~~~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~~--------~~~~~~~~~~~l~~~i~~~~~~~---~~~~~~-i~gi 152 (380)
T 2hoe_A 85 NCAYVLGIEVTRDEIAACLIDASMNILAHEAHPLP--------SQSDREETLNVMYRIIDRAKDMM---EKLGSK-LSAL 152 (380)
T ss_dssp GGCEEEEEEECSSEEEEEEEETTCCEEEEEEEECC--------SSCCHHHHHHHHHHHHHHHHHHH---HHTTCC-CCEE
T ss_pred CCCeEEEEEECCCEEEEEEECCCCCEEEEEEEccC--------CCCCHHHHHHHHHHHHHHHHHhc---CCCcCc-EEEE
Confidence 45689999999999999999999999988777665 23579999999999999998763 233457 9999
Q ss_pred EEccccceeEEeeCCCCccc-ccccccccc
Q 009868 85 GLTNQRETTVLWSKSTGCPL-YNAIVWMDA 113 (523)
Q Consensus 85 gis~~~~~~v~~d~~~g~~l-~~~i~w~D~ 113 (523)
||+..+ ++|.++|..+ .+.+.|.+.
T Consensus 153 gi~~pG----~vd~~~g~v~~~~~l~w~~~ 178 (380)
T 2hoe_A 153 TVAAPG----PIDTERGIIIDPRNFPLSQI 178 (380)
T ss_dssp EEEESS----CEETTTTEECCCSSCTTBTS
T ss_pred EEEeec----cEECCCCEEeccCCCCCcCC
Confidence 998844 6786567765 344568654
No 26
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=98.45 E-value=3e-07 Score=95.07 Aligned_cols=93 Identities=8% Similarity=0.091 Sum_probs=72.2
Q ss_pred cCCceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceE
Q 009868 4 AKEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKA 83 (523)
Q Consensus 4 ~~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~a 83 (523)
+...|++|||+|+|++|++++|.+|+++.+.+.+++ +++++++++.+.+.+++++++ .+.+..+ |.+
T Consensus 82 ~~~~~~lgiDiG~t~i~~~l~d~~G~il~~~~~~~~---------~~~~~~~~~~l~~~i~~~~~~---~~~~~~~-i~g 148 (406)
T 1z6r_A 82 TEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELA---------LKDDLPLLDRIISHIDQFFIR---HQKKLER-LTS 148 (406)
T ss_dssp CTTCEEEEEEEETTEEEEEEEETTCCEEEEEEEECC---------SSCSSCHHHHHHHHHHHHHHH---TGGGCCC-EEE
T ss_pred CCccEEEEEEEcCCEEEEEEEcCCCCEEEEEEecCC---------CCCHHHHHHHHHHHHHHHHHh---cCCCcCc-eeE
Confidence 345689999999999999999999999988776653 357788999999999999876 3444567 999
Q ss_pred EEEccccceeEEeeCCCCcccc-ccc-ccccc
Q 009868 84 IGLTNQRETTVLWSKSTGCPLY-NAI-VWMDA 113 (523)
Q Consensus 84 Igis~~~~~~v~~d~~~g~~l~-~~i-~w~D~ 113 (523)
|||+..+ ++|.++|..+. +.+ .|.+.
T Consensus 149 igi~~pG----~vd~~~g~v~~~~~l~~w~~~ 176 (406)
T 1z6r_A 149 IAITLPG----IIDTENGIVHRMPFYEDVKEM 176 (406)
T ss_dssp EEEEESS----EEETTTTEEEECTTCTTCSSB
T ss_pred EEEEeec----CEeCCCCEEecCCCCCCccCC
Confidence 9999844 77875677663 334 57654
No 27
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=98.43 E-value=8.3e-07 Score=88.95 Aligned_cols=83 Identities=16% Similarity=0.116 Sum_probs=66.9
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEc
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLT 87 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis 87 (523)
|++|||+|+|++|++++|.+|+++.+.+.+++ ..+++++++.+.+.++++..+. .. +.+|||+
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~~-------~~-~~gigi~ 87 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLERVATERVPTP---------TDDYPLLLETIAGLVAKYDQEF-------AC-EGKIGLG 87 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECC---------TTCHHHHHHHHHHHHHHHHHHH-------TS-CCEEEEE
T ss_pred EEEEEEECCCEEEEEEEeCCCcEEEEEEecCC---------CCCHHHHHHHHHHHHHHHHHhc-------CC-ccEEEEE
Confidence 79999999999999999999999988777664 2378999999999998887652 24 7788888
Q ss_pred cccceeEEeeCCCCcccccccccc
Q 009868 88 NQRETTVLWSKSTGCPLYNAIVWM 111 (523)
Q Consensus 88 ~~~~~~v~~d~~~g~~l~~~i~w~ 111 (523)
. ..++|.++|....+.+.|.
T Consensus 88 ~----pG~vd~~~g~v~~~~~~~~ 107 (327)
T 4db3_A 88 L----PGMEDADDATVLTVNVPAA 107 (327)
T ss_dssp E----SEEECTTTCCEEESSSGGG
T ss_pred e----eccEeCCCCEEEcCCCccc
Confidence 7 4478865787777766673
No 28
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.38 E-value=4.1e-07 Score=90.97 Aligned_cols=85 Identities=16% Similarity=0.245 Sum_probs=66.6
Q ss_pred ceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEE
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGL 86 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgi 86 (523)
+|++|||+|+|++|++++|.+|+++.+.+.++ +++++++++.+.+.++++.++ .+ |.+|||
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~~----------~~~~~~~~~~i~~~i~~~~~~--------~~-i~gigi 62 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGRILSTFKVAT----------PPTAEGIVDAICAAVAGASEG--------HD-VEAVGI 62 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCBCCCEEEEC----------CSSHHHHHHHHHHHHHHHHTT--------CC-EEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEeeC----------CCCHHHHHHHHHHHHHHHHhh--------cC-ceEEEE
Confidence 58999999999999999999999998776665 257899999999988887643 36 999999
Q ss_pred ccccceeEEeeCCCCcccc-ccccccccC
Q 009868 87 TNQRETTVLWSKSTGCPLY-NAIVWMDAR 114 (523)
Q Consensus 87 s~~~~~~v~~d~~~g~~l~-~~i~w~D~R 114 (523)
+.. .++|.++|.... |.+.|.+..
T Consensus 63 ~~p----G~vd~~~g~v~~~~~l~w~~~~ 87 (321)
T 3vgl_A 63 GAA----GYVDDKRATVLFAPNIDWRHEP 87 (321)
T ss_dssp EES----SEECTTSSCEEECSSSCCEEEC
T ss_pred ecc----ccEeCCCCEEEeCCCCCCcCCC
Confidence 884 477875666553 445787654
No 29
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=98.33 E-value=1e-06 Score=88.78 Aligned_cols=91 Identities=14% Similarity=0.107 Sum_probs=69.3
Q ss_pred CceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEE
Q 009868 6 EVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIG 85 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIg 85 (523)
..|++|||+|+|++|++++|.+|+++.+.+.+++ ++++++++.+.+.+++++++.. ....+ |.+||
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~----------~~~~~~~~~i~~~i~~~~~~~~---~~~~~-i~gig 94 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNP----------KTYEERINLILQMCVEAAAEAV---KLNCR-ILGVG 94 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSCEEEEEEEECC----------SSHHHHHHHHHHHHHHHHHHHH---HTTEE-EEEEE
T ss_pred CcEEEEEEECCCEEEEEEECCCCcEEEEEEEcCC----------CCHHHHHHHHHHHHHHHHHhcc---cccCc-eEEEE
Confidence 4689999999999999999999999987666543 3688899999999998877632 23357 99999
Q ss_pred EccccceeEEeeCCCCcccc-ccc--cccccC
Q 009868 86 LTNQRETTVLWSKSTGCPLY-NAI--VWMDAR 114 (523)
Q Consensus 86 is~~~~~~v~~d~~~g~~l~-~~i--~w~D~R 114 (523)
|+..+ ++|.++|..+. +.+ .|.+..
T Consensus 95 i~~pG----~vd~~~g~v~~~~~~~~~w~~~~ 122 (343)
T 2yhw_A 95 ISTGG----RVNPREGIVLHSTKLIQEWNSVD 122 (343)
T ss_dssp EEESS----EEETTTTEEEECCTTSSSCSSEE
T ss_pred Eeccc----CEeCCCCEEEeCCcCCCCCcCCC
Confidence 99844 77875677664 323 576554
No 30
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=98.31 E-value=7.9e-07 Score=88.86 Aligned_cols=90 Identities=17% Similarity=0.126 Sum_probs=68.3
Q ss_pred CCceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEE
Q 009868 5 KEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAI 84 (523)
Q Consensus 5 ~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aI 84 (523)
+..|+||||+|+|++|++++|.+|+++.+.+.+++ ...+++++++.+.+.++++++. ..+ |.+|
T Consensus 17 ~~~~~lgidiggt~i~~~l~d~~g~il~~~~~~~~--------~~~~~~~~~~~i~~~i~~~~~~-------~~~-i~gi 80 (321)
T 3r8e_A 17 FQGMILGIDVGGTSVKFGLVTPEGEIQNATRFMTA--------DWVNGIGFVESMKLEIGNFLKQ-------YPI-VKGV 80 (321)
T ss_dssp --CCEEEEECCSSEEEEEEECTTCCEEEEEEEEHH--------HHHTTTCHHHHHHHHHHHHHHH-------CTT-CCEE
T ss_pred cCcEEEEEEECCCEEEEEEEcCCCcEEEEEEEeCC--------CCCCHHHHHHHHHHHHHHHHhc-------cCC-eeEE
Confidence 45689999999999999999999999998877765 2346788898898888888752 236 8999
Q ss_pred EEccccceeEEeeCCCCcccccc-cc-ccccC
Q 009868 85 GLTNQRETTVLWSKSTGCPLYNA-IV-WMDAR 114 (523)
Q Consensus 85 gis~~~~~~v~~d~~~g~~l~~~-i~-w~D~R 114 (523)
||+.. .++|.++|..+.+. +. |.+..
T Consensus 81 gi~~p----G~vd~~~g~v~~~~~l~~w~~~~ 108 (321)
T 3r8e_A 81 GIGWP----GLVSLDRTKVILLPNIPSVVNVP 108 (321)
T ss_dssp EEEES----SEECTTSCCEEEBTTBCCCCSCC
T ss_pred EEEec----ccEECCCCEEEeCCCCccccCCC
Confidence 99884 47786578776443 43 87654
No 31
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=98.27 E-value=4e-07 Score=90.57 Aligned_cols=88 Identities=11% Similarity=0.158 Sum_probs=64.9
Q ss_pred CCceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEE
Q 009868 5 KEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAI 84 (523)
Q Consensus 5 ~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aI 84 (523)
...|++|||+|+|++|++++|.+|+++.+.+.+++ +.+++++++.+.+.+++++++. + .+ |.+|
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~~---~---~~-i~gi 68 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGETLHCEKKRTA---------EVIAPGLVSGIGEMIDEQLRRF---N---AR-CHGL 68 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSCEEEEEEEEHH---------HHHTTCHHHHHHHHHHHHHHHH---T---EE-EEEE
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCCEEEEEEecCc---------cccHHHHHHHHHHHHHHHHHhc---C---CC-eeEE
Confidence 34689999999999999999999999987776654 2234567778888887776552 1 25 8999
Q ss_pred EEccccceeEEeeCCCCcccc-ccccccc
Q 009868 85 GLTNQRETTVLWSKSTGCPLY-NAIVWMD 112 (523)
Q Consensus 85 gis~~~~~~v~~d~~~g~~l~-~~i~w~D 112 (523)
||+.. .++|.++|..+. |.+.|.+
T Consensus 69 gi~~p----G~vd~~~g~v~~~~~l~~~~ 93 (310)
T 3htv_A 69 VMGFP----ALVSKDKRTIISTPNLPLTA 93 (310)
T ss_dssp EEEES----SCBCTTSSCBCSCCSSSCCH
T ss_pred EEecc----ccEeCCCCEEEeCCCCCCcc
Confidence 99884 467875677664 4456764
No 32
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.17 E-value=3.3e-06 Score=85.09 Aligned_cols=76 Identities=14% Similarity=0.205 Sum_probs=60.1
Q ss_pred CCceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcc-cCceE
Q 009868 5 KEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVD-SGLKA 83 (523)
Q Consensus 5 ~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~I~a 83 (523)
|++|+||||+|+|++|++++|.+|+++.+.+.+.. .+.+++++++++.+.+.+++++++ .+.+++ + |.+
T Consensus 4 M~~~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~~~~---~~~~~~~~-i~g 73 (347)
T 2ch5_A 4 MAAIYGGVEGGGTRSEVLLVSEDGKILAEADGLST------NHWLIGTDKCVERINEMVNRAKRK---AGVDPLVP-LRS 73 (347)
T ss_dssp SSCEEEEEEECTTCEEEEEEETTSCEEEEEEECCC------CHHHHCHHHHHHHHHHHHHHHHHH---HTCCTTCC-BSE
T ss_pred cceEEEEEEcCccceEEEEEeCCCCEEEEEeCCCC------CcccCCHHHHHHHHHHHHHHHHHh---cCCCcccc-eeE
Confidence 44599999999999999999999999987665321 122468999999999999999876 344555 7 999
Q ss_pred EEEcccc
Q 009868 84 IGLTNQR 90 (523)
Q Consensus 84 Igis~~~ 90 (523)
|||+..+
T Consensus 74 igi~~pG 80 (347)
T 2ch5_A 74 LGLSLSG 80 (347)
T ss_dssp EEEEETT
T ss_pred EEEeccC
Confidence 9998844
No 33
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=98.17 E-value=5.1e-06 Score=82.29 Aligned_cols=71 Identities=18% Similarity=0.247 Sum_probs=56.4
Q ss_pred ceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCc--eEE
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGL--KAI 84 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I--~aI 84 (523)
.|++|||+|+|++|++++|.+|+++.+.+.+.. . ..++++++++.+.+.+++++++ .+.++++ | .+|
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~~G~il~~~~~~~~------~-~~~~~~~~~~~l~~~i~~~l~~---~~~~~~~-i~~~~i 79 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHASDGTPLAMAEGGAS------A-LSQGIAKSWQAVLSTLEAAFQQ---AGLPAAP-ASACAI 79 (305)
T ss_dssp CEEEEEEECSSCEEEEEEETTCCEEEEEEESCC------C-GGGCHHHHHHHHHHHHHHHHHH---TTCCCCC-GGGEEE
T ss_pred CEEEEEEcCccceEEEEEcCCCCEEEEEeCCCC------C-cccCHHHHHHHHHHHHHHHHHh---cCCChhh-hccceE
Confidence 489999999999999999999999987655321 0 1368999999999999999876 4555566 7 677
Q ss_pred EEcc
Q 009868 85 GLTN 88 (523)
Q Consensus 85 gis~ 88 (523)
||+.
T Consensus 80 gig~ 83 (305)
T 1zc6_A 80 GLGL 83 (305)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7766
No 34
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=98.01 E-value=5.6e-06 Score=81.90 Aligned_cols=86 Identities=17% Similarity=0.095 Sum_probs=61.9
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEc
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLT 87 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis 87 (523)
|++|||+|+|++|++++|.++ ++...+.+++ ..+++++++.+.+.+++++++. ..+ |.+|||+
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~~-~l~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~~------~~~-i~gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGKR-LLSKVVVPTP---------KEGGERVAEALAEAAERAEREA------GVR-GEAIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECSSS-BSCCEEEECC---------SSCHHHHHHHHHHHHHHHHHHH------TCC-CSSEEEE
T ss_pred EEEEEEEcCCEEEEEEEeCCC-cEEEEEEcCC---------CCChHHHHHHHHHHHHHHHhhc------cCC-ceEEEEE
Confidence 789999999999999999884 5555566554 2345789999999998887652 246 8889998
Q ss_pred cccceeEEeeCCCCcccc-ccc-cccccC
Q 009868 88 NQRETTVLWSKSTGCPLY-NAI-VWMDAR 114 (523)
Q Consensus 88 ~~~~~~v~~d~~~g~~l~-~~i-~w~D~R 114 (523)
.. .++|.++|.... +.+ .|.+..
T Consensus 65 ~p----G~vd~~~g~v~~~~~~~~w~~~~ 89 (302)
T 3vov_A 65 TP----GPLDFRRGVIRFAPNIPGVQDFP 89 (302)
T ss_dssp ES----SCEETTTTEEC---CCTTCTTCC
T ss_pred ec----ccEeCCCCEEEcCCCCCCcCCCC
Confidence 73 477875676663 334 576643
No 35
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=98.01 E-value=8.1e-06 Score=80.51 Aligned_cols=81 Identities=20% Similarity=0.200 Sum_probs=57.8
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEc
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLT 87 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis 87 (523)
|++|||+|+|++|++++|.+|+++.+.+.+++ ..+++++++.+.+ .+++ ..+ |.+|||+
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~---------~~~~~~~~~~i~~----~~~~-------~~~-i~gigi~ 63 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGEIILTKSAEIS---------GSDGDQILAEMKV----FLAE-------NTD-VTGIAVS 63 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECS---------TTCHHHHHHHHHH----HHHT-------CTT-CCEEEEE
T ss_pred EEEEEEeCCCeEEEEEECCCCCEEEEEEecCC---------CCCHHHHHHHHHH----HHhh-------cCC-eeEEEEe
Confidence 79999999999999999999999988777654 1245555555443 3322 136 8999999
Q ss_pred cccceeEEeeCCCCccccc-cc-ccccc
Q 009868 88 NQRETTVLWSKSTGCPLYN-AI-VWMDA 113 (523)
Q Consensus 88 ~~~~~~v~~d~~~g~~l~~-~i-~w~D~ 113 (523)
.. .++|.++|..+.+ .+ .|.+.
T Consensus 64 ~p----G~vd~~~g~v~~~~~l~~w~~~ 87 (297)
T 4htl_A 64 AP----GYVNPKTGLITMGGAIRRFDNF 87 (297)
T ss_dssp ES----SEECTTTCEEEECTTCGGGTTE
T ss_pred cC----cceeCCCCEEEeCCCCCCccCC
Confidence 84 4788757877654 33 47764
No 36
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.94 E-value=9.4e-05 Score=72.03 Aligned_cols=140 Identities=14% Similarity=0.012 Sum_probs=88.1
Q ss_pred chhchhHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCceEEEcCCCCCCCCCCCCCCceeEEc-----CCCCCCHHHHHHH
Q 009868 317 SIAIAGAAVQWLRDSLGIISSASEIEELALQVNSTGGVYFVPAFNGLFAPWWRDDARGVCIG-----ITRFTSKAHIARA 391 (523)
Q Consensus 317 ~~~~~G~~l~w~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~l~G~r~P~~~~~arg~~~g-----l~~~~~~~~l~rA 391 (523)
+...+|..++-.+..++. .+++++.++|.+-..++-=+.+-.+.|...+.-..+...+.|| +....+++|++++
T Consensus 137 ~aaGgGtFl~l~a~ll~~-~~~~el~~lA~~g~~~~vDl~v~DIy~~~~~~l~~~s~as~Fgk~~~l~~~g~~~eDIaas 215 (287)
T 2ews_A 137 IGTGGGMIQGLGYLLSQI-TDYKQLTDMAQHGDRNTIDLKVRHIYKDTEPPIPGDLTAANFGHVLHHLDADFTPSNKLAA 215 (287)
T ss_dssp ESCSHHHHHHHHHHHHCC-CCHHHHHHHHTTCCCTTTCEETTTC-------CCTTSEEETTTTGGGCTTSCCCHHHHHHH
T ss_pred cccchhhHHHHHHHHhCC-CCHHHHHHHHHcCCccccccchhhhcCCCCCCcCcchhhHHHHHHHHHHhCCCCHHHHHHH
Confidence 333467777777766663 3799999998543111100111111111001111222233222 2335789999999
Q ss_pred HHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecC-ccccHHHHHHHHhh---cCCceeecCCCC-ccHHHHHHH
Q 009868 392 VLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGG-ATVNNLLMQIQADL---LGSPVIRPADIE-TTALGAAFA 466 (523)
Q Consensus 392 v~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG-~a~s~~~~qi~Adv---lg~pv~~~~~~e-~~alGaA~l 466 (523)
++.+|+..+-.+.....+ ..+ +++|+++|| .+.|+.+++.+.+. ++.++.+++..+ .+|+|||+.
T Consensus 216 l~~sV~~~I~~la~~~a~--~~~--------i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGAaL~ 285 (287)
T 2ews_A 216 VIGVVGEVVTTMAITVAR--EFK--------TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYL 285 (287)
T ss_dssp HHHHHHHHHHHHHHHHHH--HTT--------CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHH--hCC--------CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHHHHh
Confidence 999998887666543322 234 678999999 89999999999998 588999888655 689999986
Q ss_pred H
Q 009868 467 A 467 (523)
Q Consensus 467 A 467 (523)
|
T Consensus 286 ~ 286 (287)
T 2ews_A 286 E 286 (287)
T ss_dssp C
T ss_pred C
Confidence 4
No 37
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=97.90 E-value=1.9e-05 Score=78.01 Aligned_cols=80 Identities=20% Similarity=0.179 Sum_probs=55.5
Q ss_pred ceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEE
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGL 86 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgi 86 (523)
+|++|||+|+|++|++++|.+|+++.+.+.+++ +++++++.+.+.++ + .+ |.+|||
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~t~-----------~~~~~l~~i~~~~~----~--------~~-i~gigi 58 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGREDGTIIDRIEFPTX-----------MPDETIEXVIQYFS----Q--------FS-LQAIGI 58 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEEEEEECC-----------CHHHHHHHHHHHHT----T--------SC-CSEEEE
T ss_pred cEEEEEEECcceeEEEEEECCCcEEEEEEecCC-----------ChHHHHHHHHHHhc----c--------CC-ceEEEE
Confidence 578999999999999999999999987766543 45666555443322 1 25 899999
Q ss_pred ccccceeEEeeCCC-----Cccc-cccccccccC
Q 009868 87 TNQRETTVLWSKST-----GCPL-YNAIVWMDAR 114 (523)
Q Consensus 87 s~~~~~~v~~d~~~-----g~~l-~~~i~w~D~R 114 (523)
+.. .++|.++ |... .|...|.+..
T Consensus 59 ~~p----G~vd~~~~~~~~G~i~~~~~~~w~~~~ 88 (302)
T 3epq_A 59 GSF----GPVDNDXTSQTYGTITATPXAGWRHYP 88 (302)
T ss_dssp EEC----SSEECCTTSTTTTEECCCSSTTTBTCC
T ss_pred Eec----eeeccccccccccEEecCCCCCccCCC
Confidence 883 4677634 4444 3445677653
No 38
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=97.89 E-value=6.9e-06 Score=83.28 Aligned_cols=93 Identities=12% Similarity=0.049 Sum_probs=65.3
Q ss_pred CcccCCceEEEEecCCCCceEEEEcCCCCEEEEE-EeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCccc
Q 009868 1 MAKAKEVFIGAIDQGTTSTRFIIYDHQARPIGSH-QVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDS 79 (523)
Q Consensus 1 m~~~~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~-~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 79 (523)
|-++...|++|||+|+|++|++++| +|+++.+. +.+++ .. +++++++.+.+.+. +++++ .. .+
T Consensus 3 ~~n~d~~~~lgiDIGgt~i~~~l~d-~G~il~~~~~~~~~--------~~-~~~~~l~~i~~~~~-~i~~~----~~-~~ 66 (366)
T 3mcp_A 3 MYTNDNRIVMTLDAGGTNFVFSAIQ-GGKEIADPVVLPAC--------AD-CLDKCLGNLVEGFK-AIQAG----LP-EA 66 (366)
T ss_dssp TTTTCCCEEEEEECSSSEEEEEEEE-TTEECSCCEEEECC--------TT-CHHHHHHHHHHHHH-HHHTT----CS-SC
T ss_pred cCCCCCCEEEEEEECcceEEEEEEE-CCEEEEEEEEEECC--------CC-CHHHHHHHHHHHHH-HHHHH----hh-cC
Confidence 3456678999999999999999999 99998766 55554 12 78888887777322 22221 11 46
Q ss_pred CceEEEEccccceeEEeeCCCCcccc-ccc-ccc-ccC
Q 009868 80 GLKAIGLTNQRETTVLWSKSTGCPLY-NAI-VWM-DAR 114 (523)
Q Consensus 80 ~I~aIgis~~~~~~v~~d~~~g~~l~-~~i-~w~-D~R 114 (523)
|.+|||+. +.++|.++|..+. |.+ .|. +..
T Consensus 67 -i~gIGIav----PG~Vd~~~G~i~~~~nlp~w~~~~~ 99 (366)
T 3mcp_A 67 -PVAISFAF----PGPADYQAGIIGDLPNFPSFRGGVA 99 (366)
T ss_dssp -CCEEEEEC----CSSEETTTTEECCCTTCGGGTTCBC
T ss_pred -CeEEEEEe----cceEeCCCCEEEeCCCcccccCCCC
Confidence 99999998 4577875787764 344 687 543
No 39
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=97.88 E-value=1.6e-05 Score=77.81 Aligned_cols=83 Identities=10% Similarity=0.088 Sum_probs=57.8
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEc
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLT 87 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis 87 (523)
|++|||+|.|++|++++|.+|+++.+.+.+++. ..+++++++.+.+.++++++ + +.+|||+
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~il~~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~----------~-~~~igi~ 62 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQIRDRRELPTPA--------SQTPEALRDALSALVSPLQA----------H-AQRVAIA 62 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECCS--------SCCHHHHHHHHHHHHTTTGG----------G-CSEEEEE
T ss_pred eEEEEEeCCCEEEEEEECCCCCEEEEEEecCCC--------CCCHHHHHHHHHHHHHHHHh----------h-CCEEEEE
Confidence 689999999999999999999999887776541 23578877777766655432 2 4556666
Q ss_pred cccceeEEeeCCCCccccc-cc-ccccc
Q 009868 88 NQRETTVLWSKSTGCPLYN-AI-VWMDA 113 (523)
Q Consensus 88 ~~~~~~v~~d~~~g~~l~~-~i-~w~D~ 113 (523)
. ..++|.++|..+.+ .+ .|.+.
T Consensus 63 ~----pG~vd~~~g~v~~~~~~~~w~~~ 86 (289)
T 2aa4_A 63 S----TGIIRDGSLLALNPHNLGGLLHF 86 (289)
T ss_dssp E----SSEEETTEEECSSGGGGGGGTTC
T ss_pred e----ccceeCCCCEEEeCCCCCcccCC
Confidence 6 33778645655533 33 37654
No 40
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.86 E-value=0.00011 Score=73.54 Aligned_cols=136 Identities=18% Similarity=0.067 Sum_probs=85.9
Q ss_pred chhHHHHHHHHHcCCCCCHHHHHHHHHhcCCCC-ceEEEcCCCCCCCC--CCCCCCceeEEcCC------CCCCHHHHHH
Q 009868 320 IAGAAVQWLRDSLGIISSASEIEELALQVNSTG-GVYFVPAFNGLFAP--WWRDDARGVCIGIT------RFTSKAHIAR 390 (523)
Q Consensus 320 ~~G~~l~w~~~~~~~~~~~~~l~~~a~~~~~~~-gl~~~P~l~G~r~P--~~~~~arg~~~gl~------~~~~~~~l~r 390 (523)
.+|..+.-.+ .+-...+++++.++|.+-...+ .+ .+=.+.|...| --..++..+-||-. ...+++|+++
T Consensus 206 GGGTflGL~~-lLtg~~~~dEl~~lA~~Gd~~~vDl-lV~DIYg~~y~~~gL~~~~~ASsFGk~~~~~~~~~~~~eDIa~ 283 (360)
T 2i7n_A 206 GGGTFLGLCC-LLTGCETFEEALEMAAKGDSTNVDK-LVKDIYGGDYERFGLQGSAVASSFGNMMSKEKRDSISKEDLAR 283 (360)
T ss_dssp SHHHHHHHHH-HHHCCCSHHHHHHHHHHCCGGGTSE-EHHHHHSSCBGGGTBCTTSEEETTTTTTSHHHHTTCCHHHHHH
T ss_pred ccHhHHHHHH-HHhCCCCHHHHHHHHHcCCCCcccc-eeeecccCcccccCCCccceeehhhhHhhHhhhcCCCHHHHHH
Confidence 3455555444 4422368999999986531111 11 11111111100 01233344444433 2568999999
Q ss_pred HHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecC-ccccHHHHHHHHhhcC------CceeecCCC-CccHHH
Q 009868 391 AVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGG-ATVNNLLMQIQADLLG------SPVIRPADI-ETTALG 462 (523)
Q Consensus 391 Av~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG-~a~s~~~~qi~Advlg------~pv~~~~~~-e~~alG 462 (523)
+++..|+..+..+.-...+..+ +++|+++|| .++|+..+++++..++ +++..++.. -.+|+|
T Consensus 284 gll~sVa~~I~~lA~l~A~~~~----------i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 284 ATLVTITNNIGSIARMCALNEN----------IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT----------CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcC----------CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 9999999998776533322223 568999999 9999999999999985 788877654 488999
Q ss_pred HHHHH
Q 009868 463 AAFAA 467 (523)
Q Consensus 463 aA~lA 467 (523)
||+.+
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99975
No 41
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=97.84 E-value=5.4e-05 Score=75.58 Aligned_cols=79 Identities=14% Similarity=0.110 Sum_probs=59.6
Q ss_pred CceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEE
Q 009868 6 EVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIG 85 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIg 85 (523)
..+++|||+|.|++|++++|.+|+++.+.+.+++ ..+++++++.+.+.++++..+. .. +.+||
T Consensus 23 ~~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~~-------~~-i~~ig 85 (327)
T 2ap1_A 23 NAMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTP---------HTSYSAFLDAVCELVEEADQRF-------GV-KGSVG 85 (327)
T ss_dssp CCEEEEEEECSSEEEEEEEETTCCEEEEEEEECC---------CSCHHHHHHHHHHHHHHHHHHH-------TS-CCEEE
T ss_pred CceEEEEEECCCEEEEEEEeCCCCEEEEEEecCC---------CCCHHHHHHHHHHHHHHHHHhc-------CC-ccEEE
Confidence 3579999999999999999999999987776654 1257788888888888876542 24 77788
Q ss_pred EccccceeEEeeCCCCcccc
Q 009868 86 LTNQRETTVLWSKSTGCPLY 105 (523)
Q Consensus 86 is~~~~~~v~~d~~~g~~l~ 105 (523)
|+. ..++|.++|..+.
T Consensus 86 i~~----pG~vd~~~g~v~~ 101 (327)
T 2ap1_A 86 IGI----PGMPETEDGTLYA 101 (327)
T ss_dssp EEE----SSBSCCTTSCCBC
T ss_pred EEe----eeeEECCCCEEEc
Confidence 877 3367765676554
No 42
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.74 E-value=4.4e-05 Score=75.12 Aligned_cols=55 Identities=20% Similarity=0.279 Sum_probs=46.1
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHH
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALD 68 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~ 68 (523)
|++|||+|+|++|++++|.+|+++.+.+.+++ .+.+++++++++.+.+.++++++
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~~~ 57 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGNFIGEGSSGPG------NYHNVGLTRAIENIKEAVKIAAK 57 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEEEEESCC------CHHHHCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeCCCcEEEEEEcCCCCEEEEEeCCCC------CcccCCHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999987766553 22356899999999998888764
No 43
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=97.73 E-value=6.7e-05 Score=72.65 Aligned_cols=89 Identities=18% Similarity=0.260 Sum_probs=58.4
Q ss_pred CceEEEEecCCCCceEEEEcCC-CCEEEE-EEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceE
Q 009868 6 EVFIGAIDQGTTSTRFIIYDHQ-ARPIGS-HQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKA 83 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~~-g~i~~~-~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~a 83 (523)
..|++|||+|+|++|++++|.+ |+++.. .+.+++ ...+++++++.+.+.++++.++. . .... +.+
T Consensus 11 ~~~~lgidiggt~i~~~l~dl~~g~i~~~~~~~~~~--------~~~~~~~~~~~i~~~i~~~~~~~---~-~~~~-~~~ 77 (267)
T 1woq_A 11 NAPLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTP--------QPATPESVAEAVALVVAELSARP---E-APAA-GSP 77 (267)
T ss_dssp CCCEEEEEECSSEEEEEEEETTTTEEEEEEEEEECC--------SSCCHHHHHHHHHHHHHHHHTST---T-CCCT-TCC
T ss_pred CCEEEEEEECCCEEEEEEEECCCCeEEEEEEecCCC--------ccCCHHHHHHHHHHHHHHHHHhc---c-ccCc-cce
Confidence 3578999999999999999986 777743 233332 12468888888888888876531 1 1124 556
Q ss_pred EEEccccceeEEeeCCCCcccc-ccc--ccccc
Q 009868 84 IGLTNQRETTVLWSKSTGCPLY-NAI--VWMDA 113 (523)
Q Consensus 84 Igis~~~~~~v~~d~~~g~~l~-~~i--~w~D~ 113 (523)
|||+..+ ++| +|..+. |.+ .|.+.
T Consensus 78 igi~~pG----~v~--~g~v~~~~~l~~~w~~~ 104 (267)
T 1woq_A 78 VGVTFPG----IIQ--HGVVHSAANVDKSWLNT 104 (267)
T ss_dssp EEEEESS----CEE--TTEECCCTTSCGGGTTC
T ss_pred EEEEccc----eEc--CCEEEeCCCCCCCCCCC
Confidence 7777633 456 466654 333 47654
No 44
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=97.67 E-value=0.00013 Score=79.08 Aligned_cols=84 Identities=18% Similarity=0.168 Sum_probs=65.1
Q ss_pred CHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecC-CCCccHHH
Q 009868 384 SKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPA-DIETTALG 462 (523)
Q Consensus 384 ~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~-~~e~~alG 462 (523)
.-+++++.+++.+.-.++..++.. +..+ .+++.|+++||++++|.+.+++.+.||+++.+.. ..++.|+|
T Consensus 304 ~~e~l~~~~~~~i~~~v~~~L~~a----~~~~-----~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~G 374 (605)
T 4b9q_A 304 KLESLVEDLVNRSIEPLKVALQDA----GLSV-----SDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIG 374 (605)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHT----TCCG-----GGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc----CCCH-----HHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHh
Confidence 345677778888877777766543 3221 1289999999999999999999999999987744 67899999
Q ss_pred HHHHHHHhccccCC
Q 009868 463 AAFAAGLAIGVFKE 476 (523)
Q Consensus 463 aA~lA~~~~G~~~~ 476 (523)
||+.|+.-.|..++
T Consensus 375 Aai~a~~l~~~~~~ 388 (605)
T 4b9q_A 375 AAVQGGVLTGDVKD 388 (605)
T ss_dssp HHHHHHHHHTSSCS
T ss_pred HHHHHHHhcCCCCc
Confidence 99999987775443
No 45
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=97.54 E-value=0.00011 Score=71.94 Aligned_cols=79 Identities=14% Similarity=0.159 Sum_probs=55.0
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEc
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLT 87 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis 87 (523)
+++|||+|+|++|++++|.+|+++.+.+.+++ .+++++.+.+.+.+++ .+ |.+|||+
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~il~~~~~~~~----------~~~~~~~~~i~~~i~~------------~~-i~gigi~ 61 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGKILDKTSISTP----------ENLEDLLAWLDQRLSE------------QD-YSGIAMS 61 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCCEEEEEEECCC----------SSHHHHHHHHHHHHTT------------SC-CSEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEEeCC----------CCHHHHHHHHHHHHHh------------CC-CcEEEEE
Confidence 58999999999999999999999987665442 3566666555544332 25 8889988
Q ss_pred cccceeEEeeCCCCcccc-cccc-cccc
Q 009868 88 NQRETTVLWSKSTGCPLY-NAIV-WMDA 113 (523)
Q Consensus 88 ~~~~~~v~~d~~~g~~l~-~~i~-w~D~ 113 (523)
. ..++|.++|..+. +.+. |.+.
T Consensus 62 ~----pG~vd~~~g~v~~~~~~~~~~~~ 85 (292)
T 2gup_A 62 V----PGAVNQETGVIDGFSAVPYIHGF 85 (292)
T ss_dssp E----SSEECTTTCBEESCCSSGGGSSS
T ss_pred e----cCcccCCCCEEEecCCCCcccCC
Confidence 8 3477875676653 3333 5443
No 46
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=97.19 E-value=0.00017 Score=67.83 Aligned_cols=69 Identities=14% Similarity=0.037 Sum_probs=44.9
Q ss_pred CceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEE
Q 009868 6 EVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIG 85 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIg 85 (523)
+.+++|||+|+|++| ++|.+|++ ..+.+++ ...+++++.+.+.+ ++++ .+ +.+||
T Consensus 5 ~~~~lgiDIGGT~i~--~~d~~g~~--~~~~~t~--------~~~~~~~~~~~i~~----~i~~--------~~-i~gig 59 (226)
T 3lm2_A 5 DQTVLAIDIGGSHVK--IGLSTDGE--ERKVESG--------KTMTGPEMVAAVTA----MAKD--------MT-YDVIA 59 (226)
T ss_dssp GCCEEEEEECSSEEE--EEETTTCC--EEEEECC--------TTCCHHHHHHHHHH----HTTT--------CC-CSEEE
T ss_pred CCEEEEEEECCCEEE--EEECCCCE--EEEEECC--------CCCCHHHHHHHHHH----HHHh--------CC-CCEEE
Confidence 357999999999999 57888886 2344443 12456666655544 3322 15 88899
Q ss_pred EccccceeEEeeCCCCccc
Q 009868 86 LTNQRETTVLWSKSTGCPL 104 (523)
Q Consensus 86 is~~~~~~v~~d~~~g~~l 104 (523)
|+. +.++|. ++..+
T Consensus 60 i~~----pG~Vd~-~~~~~ 73 (226)
T 3lm2_A 60 MGY----PGPVVH-NKPLR 73 (226)
T ss_dssp EEE----SSCEET-TEECS
T ss_pred EEE----EeEEEC-CeEEE
Confidence 988 446787 55444
No 47
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=97.15 E-value=0.00031 Score=68.83 Aligned_cols=69 Identities=22% Similarity=0.302 Sum_probs=49.4
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEc
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLT 87 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis 87 (523)
+++|||+|+|++|++++| +|+++.+.+.+.. .+ ...+++++++.+.+.++++.. .+..+ |.+|||+
T Consensus 1 ~~lgiDiGGT~~~~~l~d-~g~il~~~~~~~~--~~----~~~~~~~~~~~i~~~i~~~~~------~~~~~-i~~igig 66 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAK-EGKSLGRFQTSGI--NP----FQQDRNEIDTALRSEVLPAIG------QKASS-IRAVYFY 66 (291)
T ss_dssp CEEEEEECSSEEEEEEEE-TTEEEEEEEEECC--CT----TTSCHHHHHHHHTTTTHHHHT------TSTTT-CCEEEEE
T ss_pred CEEEEEeCccceEEEEEe-CCeEEEEEECCCC--Cc----ccCCHHHHHHHHHHHHHHHhC------CCccc-ccEEEEE
Confidence 379999999999999999 9999987765432 01 123678888888877776532 22346 8888887
Q ss_pred ccc
Q 009868 88 NQR 90 (523)
Q Consensus 88 ~~~ 90 (523)
..+
T Consensus 67 ~pG 69 (291)
T 1zbs_A 67 GAG 69 (291)
T ss_dssp ETT
T ss_pred CCC
Confidence 743
No 48
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=97.06 E-value=0.00037 Score=71.06 Aligned_cols=81 Identities=19% Similarity=0.249 Sum_probs=51.5
Q ss_pred ceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHH---HHHHHHHHHHHhhCCCCcccCceE
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESV---RVCMAKALDKATADGHNVDSGLKA 83 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~I~a 83 (523)
++++|||+|+|++|++++|.+ +++.+.+.+++.... .+++++.+.+ .+.+.+++++ .+....+ |.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~-~il~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~---~~~~~~~-i~g 70 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE-RMVKMQNFSHSPDEL------GRFQKILDQLEFREKIARQFVEE---TGYSLSS-FSA 70 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT-EEEEEEEEECCHHHH------HTCSSGGGGHHHHHHHHHHHHHT---TTCCGGG-CSE
T ss_pred CeEEEEECCccceeEEEEecc-hheeeeecccCcccc------cchhhHHHHHHHHHHHHHHHHHH---cCCCccC-ceE
Confidence 478999999999999999976 888887776642100 0111233333 5566666654 3444567 888
Q ss_pred EEEccccceeEEeeCCCCcc
Q 009868 84 IGLTNQRETTVLWSKSTGCP 103 (523)
Q Consensus 84 Igis~~~~~~v~~d~~~g~~ 103 (523)
| |+. +.++|..+|..
T Consensus 71 I-i~~----pG~vd~~~G~~ 85 (381)
T 1saz_A 71 F-VSR----GGLLDPIPGGV 85 (381)
T ss_dssp E-EEE----CCSCSCBCSSE
T ss_pred E-Eec----CCCCCCCCCce
Confidence 8 766 33567545654
No 49
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=97.01 E-value=0.00041 Score=70.52 Aligned_cols=84 Identities=13% Similarity=-0.031 Sum_probs=57.6
Q ss_pred CceEEEEecCCCCceEEEEcC----CCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCc
Q 009868 6 EVFIGAIDQGTTSTRFIIYDH----QARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGL 81 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~----~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I 81 (523)
++|++|||+|+|++|++++|. +|+++...+. ++ . .+++.+.+.+.+.++++.... +.+ |
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~-~~----~-----~~~~~~~~~i~~~i~~~~~~~------~~~-i 90 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVHACVTRYS-MK----R-----KDITEIIEFFNEIIELMPASV------MKR-V 90 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEE-CT----T-----CBGGGHHHHHHHHHHHSCHHH------HTT-E
T ss_pred CCeEEEEEEccccEEEEEEecccCCCccEEEEeee-cC----C-----CCHHHHHHHHHHHHHHHhhcc------ccc-c
Confidence 468999999999999999998 8998876541 11 1 356677777777776654321 235 8
Q ss_pred eEEEEccccceeEEeeCCCCccccccccccc
Q 009868 82 KAIGLTNQRETTVLWSKSTGCPLYNAIVWMD 112 (523)
Q Consensus 82 ~aIgis~~~~~~v~~d~~~g~~l~~~i~w~D 112 (523)
.+|||+.. .++|. |....+...|.+
T Consensus 91 ~gigi~~p----G~vd~--g~v~~~~~~~~~ 115 (373)
T 2q2r_A 91 KAGVINVP----GPVTG--GAVGGPFNNLKG 115 (373)
T ss_dssp EEEEEEES----SCEET--TTEECCCSSSBS
T ss_pred cEEEEEee----ccccC--CEEeccCCCCCC
Confidence 88888883 46775 555544444654
No 50
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=97.00 E-value=0.0015 Score=66.62 Aligned_cols=75 Identities=20% Similarity=0.198 Sum_probs=57.5
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhc-CCceeec-CCCCccHHHH
Q 009868 386 AHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLL-GSPVIRP-ADIETTALGA 463 (523)
Q Consensus 386 ~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advl-g~pv~~~-~~~e~~alGa 463 (523)
+++++..++.+.-.++..++.... .... ++.|+++||+++++.+.+.+.+.| +++|... +..++.|+||
T Consensus 316 ~~~~~~~~~~i~~~i~~~l~~~~~-~~~~--------i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Ga 386 (394)
T 3qfu_A 316 EELNLDLFKKTLKPVEKVLQDSGL-EKKD--------VDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGA 386 (394)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTC-CGGG--------CCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC-CHHH--------CCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHH
Confidence 456666677776666666554321 1123 899999999999999999999999 8888775 5678899999
Q ss_pred HHHHHH
Q 009868 464 AFAAGL 469 (523)
Q Consensus 464 A~lA~~ 469 (523)
|+.|+.
T Consensus 387 a~~a~~ 392 (394)
T 3qfu_A 387 AVQAGV 392 (394)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999875
No 51
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=96.95 E-value=0.0015 Score=66.86 Aligned_cols=78 Identities=19% Similarity=0.229 Sum_probs=57.1
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhc-CCceeec-CCCCccHHHH
Q 009868 386 AHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLL-GSPVIRP-ADIETTALGA 463 (523)
Q Consensus 386 ~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advl-g~pv~~~-~~~e~~alGa 463 (523)
.++++.+++.+.-.++..++.. +..+ .+++.|+++||++++|.+.+.+.+.| +.+|... +..++.|+||
T Consensus 324 ~~~~~~~~~~i~~~i~~~l~~~----~~~~-----~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Ga 394 (404)
T 3i33_A 324 EELNADLFRGTLEPVEKALRDA----KLDK-----GQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 394 (404)
T ss_dssp HHHTHHHHHHTHHHHHHHHHHH----TCCG-----GGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc----CCCH-----hhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHH
Confidence 4455556666665555555543 2221 12899999999999999999999999 7888775 4677899999
Q ss_pred HHHHHHhcc
Q 009868 464 AFAAGLAIG 472 (523)
Q Consensus 464 A~lA~~~~G 472 (523)
|+.|+.-.|
T Consensus 395 a~~a~~l~~ 403 (404)
T 3i33_A 395 AVQAAILIG 403 (404)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHhcC
Confidence 999986543
No 52
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=96.93 E-value=0.0012 Score=68.52 Aligned_cols=58 Identities=14% Similarity=0.054 Sum_probs=43.6
Q ss_pred ceEEEEecCCCCceEEEEcCCCCE---EEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHH
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQARP---IGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDK 69 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~i---~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~ 69 (523)
..++|||+|+|++|++++|.+|++ +...+.++| .+- ...+++++++.+.+++++++++
T Consensus 61 G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip----~~~-~~~~~~~lfd~Ia~~i~~~~~~ 121 (457)
T 2yhx_A 61 GSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAA----AMS-TTAIPSDLWGNXAXSNAAFSSX 121 (457)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCT----TTT-SCSCTHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcC----Ccc-CCCCHHHHHHHHHHHHHHHHhh
Confidence 357999999999999999999988 444444333 110 1226789999999999998876
No 53
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=96.90 E-value=0.0011 Score=66.29 Aligned_cols=79 Identities=10% Similarity=0.057 Sum_probs=49.8
Q ss_pred CCceEEEEecCCCCceEEEEc-CCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceE
Q 009868 5 KEVFIGAIDQGTTSTRFIIYD-HQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKA 83 (523)
Q Consensus 5 ~~~~~lgIDiGtt~~K~~l~d-~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~a 83 (523)
++.|++|||+|+|++|++++| .+|+++...+.++.. ..+ +.+.+++++++ .+ .+ |.+
T Consensus 12 ~~~~~lgiDiGGT~i~~~l~dl~~g~i~~~~~~~~~~--------~~~-------~~~~i~~~~~~---~~---~~-i~g 69 (332)
T 1sz2_A 12 STKYALVGDVGGTNARLALCDIASGEISQAKTYSGLD--------YPS-------LEAVIRVYLEE---HK---VE-VKD 69 (332)
T ss_dssp --CEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--------CSC-------HHHHHHHHHHH---SC---CC-CCE
T ss_pred CCCEEEEEEechhheEEEEEECCCCcEEEEEEecCCC--------cCC-------HHHHHHHHHHh---cC---CC-ccE
Confidence 467899999999999999999 589988765444320 112 23344455544 22 35 888
Q ss_pred EEEccccceeEEeeCCCCcccccccccc
Q 009868 84 IGLTNQRETTVLWSKSTGCPLYNAIVWM 111 (523)
Q Consensus 84 Igis~~~~~~v~~d~~~g~~l~~~i~w~ 111 (523)
|||+.. .++|. +....+.+.|.
T Consensus 70 igi~~p----G~vd~--~~~~~~nl~w~ 91 (332)
T 1sz2_A 70 GCIAIA----CPITG--DWVAMTNHTWA 91 (332)
T ss_dssp EEEEES----SCCCS--SEECCSSSCCC
T ss_pred EEEEEe----CceeC--CEEeeeCCCCc
Confidence 988883 46674 44444445674
No 54
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=96.87 E-value=0.0018 Score=66.56 Aligned_cols=76 Identities=21% Similarity=0.127 Sum_probs=53.8
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceee---------cCCC
Q 009868 386 AHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIR---------PADI 456 (523)
Q Consensus 386 ~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~---------~~~~ 456 (523)
+++++.+++.+.-.++..++. .+..+ .+++.|+++||++++|.+.+++.+.|+.++.+ .+..
T Consensus 317 ~~~~~~~~~~i~~~i~~~l~~----~~~~~-----~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~ 387 (409)
T 4gni_A 317 ETIARTVFEGFNRLVESAVKK----AGLDP-----LDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPS 387 (409)
T ss_dssp HHHTHHHHHHHHHHHHHHHHH----TTCCG-----GGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHH----cCCCH-----HHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHH
Confidence 344455555555444444443 23321 12799999999999999999999999987433 4577
Q ss_pred CccHHHHHHHHHHh
Q 009868 457 ETTALGAAFAAGLA 470 (523)
Q Consensus 457 e~~alGaA~lA~~~ 470 (523)
++.|+|||+.|+.-
T Consensus 388 ~ava~GAa~~~~~~ 401 (409)
T 4gni_A 388 ELQARGAALQASLI 401 (409)
T ss_dssp THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhh
Confidence 89999999998753
No 55
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=96.82 E-value=0.0023 Score=61.53 Aligned_cols=69 Identities=14% Similarity=0.132 Sum_probs=49.6
Q ss_pred CCCHHHHHHHHHhhhhhHHHHHHHHHHhh--hccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCcc
Q 009868 382 FTSKAHIARAVLESMCFQVKDVLDSMQKD--AVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETT 459 (523)
Q Consensus 382 ~~~~~~l~rAv~Egia~~~r~~l~~l~~~--~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~ 459 (523)
..|...|-..++-|.+..+..+++++++. .+.+ -+|+++||.++ +++.. ..+..+ .++-+
T Consensus 184 ~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~---------~~vi~TGG~a~------~l~~~-~~~~~~--~~~Lv 245 (266)
T 3djc_A 184 RSTIESIQSGVYYGVLGACKELIQRIHHEAFNGDQ---------ILILATGGFAS------LFDKQ-GLYDHL--VPDLV 245 (266)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC---------EEEEEESTTGG------GGTTT-TCCSEE--CTTHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC---------CEEEEECCChH------HhccC-CCCCEE--CcChH
Confidence 46888999999999999999999999875 4433 57999999874 33444 333333 35677
Q ss_pred HHHHHHHHH
Q 009868 460 ALGAAFAAG 468 (523)
Q Consensus 460 alGaA~lA~ 468 (523)
..|-.++.-
T Consensus 246 L~GL~~i~~ 254 (266)
T 3djc_A 246 LQGIRLAAM 254 (266)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 778777654
No 56
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=96.81 E-value=0.00016 Score=70.83 Aligned_cols=66 Identities=17% Similarity=0.148 Sum_probs=35.3
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEc
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLT 87 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis 87 (523)
|++|||+|+|++|++++| +|+++.+.+.+.. .+. ..+++++++.+.+.+++++.. .+ |.+|||+
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~g~il~~~~~~~~--~~~----~~~~~~~~~~i~~~i~~~~~~--------~~-i~~igig 64 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-NGAVIKRLGTKGI--NPF----FQSEEEIQQKLTASLLPQLPE--------GK-FNAVYFY 64 (291)
T ss_dssp ---CEECCTTCEEEEEEC-SSSEEEEEEECCC--CTT----TSCSTTTTTTTTC----------------------CEEE
T ss_pred CEEEEEeccccEEEEEEc-CCeEEEEEECCCC--Ccc----cCCHHHHHHHHHHHHHHhcCc--------cc-ccEEEEE
Confidence 478999999999999999 9999987665432 111 123445555566666554321 35 7778877
Q ss_pred cc
Q 009868 88 NQ 89 (523)
Q Consensus 88 ~~ 89 (523)
..
T Consensus 65 ~p 66 (291)
T 1zxo_A 65 GA 66 (291)
T ss_dssp CT
T ss_pred cC
Confidence 74
No 57
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=96.78 E-value=0.0021 Score=66.72 Aligned_cols=78 Identities=15% Similarity=0.152 Sum_probs=51.3
Q ss_pred ceEEEEecCCCCceEEEEcCCC-CE---EEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCce
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQA-RP---IGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLK 82 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g-~i---~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~ 82 (523)
..+++||+|+||+|+++++.+| +- +...+.+.| .+- ...+.+++++.+.+++++++++ .+... + ..
T Consensus 68 G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~~~ip----~~~-~~~~~~~lfd~Ia~~i~~~l~~---~~~~~-~-~~ 137 (451)
T 1bdg_A 68 GNFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIP----AEK-MSGSGTELFKYIAETLADFLEN---NGMKD-K-KF 137 (451)
T ss_dssp EEEEEEEESSSSEEEEEEEECC-CCCCEEEEEEECCC----TTT-TTSBHHHHHHHHHHHHHHHHHH---TTCCS-S-CE
T ss_pred ceEEEEEeCCCeEEEEEEecCCCCcceEEEEEEEecC----Ccc-cCCCHHHHHHHHHHHHHHHHHh---cCCCc-c-cc
Confidence 4679999999999999999988 51 112222222 110 1236789999999999999886 34332 3 45
Q ss_pred EEEEccccceeEEeeC
Q 009868 83 AIGLTNQRETTVLWSK 98 (523)
Q Consensus 83 aIgis~~~~~~v~~d~ 98 (523)
.||++. ..++|.
T Consensus 138 ~lG~tf----sfPv~q 149 (451)
T 1bdg_A 138 DLGFTF----SFPCVQ 149 (451)
T ss_dssp EEEEEE----CSCEEE
T ss_pred ceEEEE----eeEecc
Confidence 566665 346664
No 58
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=96.60 E-value=0.0041 Score=70.35 Aligned_cols=86 Identities=12% Similarity=0.077 Sum_probs=55.2
Q ss_pred ceEEEEecCCCCceEEEEcCCCC----E-EEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCc
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQAR----P-IGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGL 81 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~----i-~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I 81 (523)
..++|||+|+|++|++++|.+|+ + +...+.++|... .+.+.+++++.+.+++++++++ .+...+...
T Consensus 78 G~~laiDlGGTnirv~lv~~~G~~~~~i~~~~~~~~ip~~~-----~~~~~~~lf~~Ia~~i~~~l~~---~~~~~~~~~ 149 (917)
T 1cza_N 78 GDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENI-----VHGSGSQLFDHVAECLGDFMEK---RKIKDKKLP 149 (917)
T ss_dssp EEEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEECCCHHH-----HSSBHHHHHHHHHHHHHHHHHH---HTCTTSCCC
T ss_pred ceEEEEEeCCCeEEEEEEEecCCCcceEEEEEEEEECCccc-----ccCCHHHHHHHHHHHHHHHHHh---cCCCCCccc
Confidence 45799999999999999998876 4 445555544110 1236789999999999998876 222222203
Q ss_pred eEEEEccccceeEEe-eCCCCccc
Q 009868 82 KAIGLTNQRETTVLW-SKSTGCPL 104 (523)
Q Consensus 82 ~aIgis~~~~~~v~~-d~~~g~~l 104 (523)
.+|+++. ++.. +.++|..+
T Consensus 150 lGi~fs~----P~~q~~~~~G~l~ 169 (917)
T 1cza_N 150 VGFTFSF----PCQQSKIDEAILI 169 (917)
T ss_dssp EEEEECS----CEECSSTTCCEEC
T ss_pred EEEEEcc----ccccCcCCceEEE
Confidence 4666666 2322 22367666
No 59
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=96.34 E-value=0.0033 Score=63.86 Aligned_cols=47 Identities=23% Similarity=0.266 Sum_probs=41.7
Q ss_pred ccEEEEecCccccHHHHHHHHhhcCCceeecC-CCCccHHHHHHHHHH
Q 009868 423 EFLLRVDGGATVNNLLMQIQADLLGSPVIRPA-DIETTALGAAFAAGL 469 (523)
Q Consensus 423 ~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~-~~e~~alGaA~lA~~ 469 (523)
++.|+++||+++.|.+.+.+.+.|+.++.... ..++.|+|||+.|+.
T Consensus 334 i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 334 IDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGV 381 (383)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTT
T ss_pred CCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHh
Confidence 78999999999999999999999999887654 677889999998753
No 60
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=96.29 E-value=0.0075 Score=63.79 Aligned_cols=79 Identities=19% Similarity=0.162 Sum_probs=56.7
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeec-CCCCccHHHHH
Q 009868 386 AHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRP-ADIETTALGAA 464 (523)
Q Consensus 386 ~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~-~~~e~~alGaA 464 (523)
.++++.+++.+.-.++..++.. +..+ .+++.|+++||+++.|.+.+.+.+.|++++... +..++.|+|||
T Consensus 275 e~l~~~~~~~i~~~i~~~L~~a----~~~~-----~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa 345 (509)
T 2v7y_A 275 EELSAHLVERTMGPVRQALQDA----GLTP-----ADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAA 345 (509)
T ss_dssp HHHTHHHHHTTHHHHHHHHHHH----TCCG-----GGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc----CCCh-----hHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHH
Confidence 3445555665555555554433 3221 128999999999999999999999999887654 46778899999
Q ss_pred HHHHHhccc
Q 009868 465 FAAGLAIGV 473 (523)
Q Consensus 465 ~lA~~~~G~ 473 (523)
+.|+.-.|.
T Consensus 346 ~~a~~l~~~ 354 (509)
T 2v7y_A 346 IQGGVIAGE 354 (509)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHhcCC
Confidence 999875553
No 61
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=96.20 E-value=0.0089 Score=62.29 Aligned_cols=92 Identities=14% Similarity=0.168 Sum_probs=54.6
Q ss_pred ceEEEEecCCCCceEEEEcCCCCE-EEEEEeeeeeccCCCCeEEe-CHHHHHHHHHHHHHHHHHHHhhCCCCc-ccCceE
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQARP-IGSHQVEFTQFYPEAGWVEH-EPMEILESVRVCMAKALDKATADGHNV-DSGLKA 83 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~i-~~~~~~~~~~~~~~~g~~e~-d~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~I~a 83 (523)
..+|+||+|+|++|+++++.+|+- .......++ .|.. ..+ ..+++++.+.+++.+.+++. +... .+ ...
T Consensus 80 G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~--Ip~~--~~~~~~~~lfd~Ia~~i~~fl~~~---~~~~~~~-~l~ 151 (485)
T 3o8m_A 80 GDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYR--LPDH--LRTGTSEQLWSFIAKCLKEFVDEW---YPDGVSE-PLP 151 (485)
T ss_dssp EEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEE--CCTT--GGGSBHHHHHHHHHHHHHHHHHHH---CTTCCSS-CEE
T ss_pred eEEEEEEecCCeEEEEEEEECCCCceEEEEEEEe--cCch--hccCCHHHHHHHHHHHHHHHHHHh---ccccccc-ccc
Confidence 368999999999999999987751 111111222 1211 122 37899999999999998872 2211 23 445
Q ss_pred EEEccccceeEEeeCCCCcccccccccc
Q 009868 84 IGLTNQRETTVLWSKSTGCPLYNAIVWM 111 (523)
Q Consensus 84 Igis~~~~~~v~~d~~~g~~l~~~i~w~ 111 (523)
+|++. ..+++. ++.--...+.|.
T Consensus 152 lGftf----SfP~~q-~~i~~g~li~wt 174 (485)
T 3o8m_A 152 LGFTF----SYPASQ-KKINSGVLQRWT 174 (485)
T ss_dssp EEEEE----CSCEEC-SBTTCCEECCCC
T ss_pred eEEEE----eeeEEE-cccCCEEEeecc
Confidence 66655 336665 331112345675
No 62
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=96.15 E-value=0.011 Score=64.66 Aligned_cols=79 Identities=22% Similarity=0.263 Sum_probs=58.7
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeec-CCCCccHHHHH
Q 009868 386 AHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRP-ADIETTALGAA 464 (523)
Q Consensus 386 ~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~-~~~e~~alGaA 464 (523)
.++++.+++.+.-.++..++.. +..+ .+++.|+++||+++.|.+.+.+.+.||+++... +..++.|+|||
T Consensus 307 e~l~~~l~~~i~~~i~~~L~~a----~l~~-----~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa 377 (675)
T 3d2f_A 307 EELVKPLLERVTEPVTKALAQA----KLSA-----EEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAA 377 (675)
T ss_dssp HHHTHHHHTTTTHHHHHHHHHH----TCCG-----GGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh----CCCh-----hhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHH
Confidence 4455556666665555555433 3321 128999999999999999999999999988664 46789999999
Q ss_pred HHHHHhccc
Q 009868 465 FAAGLAIGV 473 (523)
Q Consensus 465 ~lA~~~~G~ 473 (523)
+.|+.-.|.
T Consensus 378 ~~a~~ls~~ 386 (675)
T 3d2f_A 378 FICAIHSPT 386 (675)
T ss_dssp HHHHHTCSS
T ss_pred HHHHHhCCC
Confidence 999876554
No 63
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=96.03 E-value=0.0087 Score=67.70 Aligned_cols=91 Identities=19% Similarity=0.284 Sum_probs=56.8
Q ss_pred ceEEEEecCCCCceEEEEcCC-CC--EEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceE
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQ-AR--PIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKA 83 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~-g~--i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~a 83 (523)
..+++||+|+||+|+++++.+ |+ ++...+..+.. |.+ ......+++++.+.+++++++++ .+...+. + .
T Consensus 526 G~~lalDlGGTn~Rv~~V~l~~g~~~~~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~i~~~l~~---~~~~~~~-l-~ 597 (917)
T 1cza_N 526 GDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAI--PIE-IMQGTGEELFDHIVSCISDFLDY---MGIKGPR-M-P 597 (917)
T ss_dssp EEEEEEEESSSSEEEEEEEEECSTTCEEEEEEEEECC--CHH-HHTSBHHHHHHHHHHHHHHHHHH---HTCCSSC-C-E
T ss_pred eEEEEEEECCCcEEEEEEEeCCCcceeEEeeeeEEec--Ccc-cccCCHHHHHHHHHHHHHHHHHH---cCCCccc-e-e
Confidence 467999999999999999985 64 66443333321 110 01125688999999999999876 3333344 4 6
Q ss_pred EEEccccceeEEeeCCCCccccccccc
Q 009868 84 IGLTNQRETTVLWSKSTGCPLYNAIVW 110 (523)
Q Consensus 84 Igis~~~~~~v~~d~~~g~~l~~~i~w 110 (523)
|||+. ..++|. ....-.+.+.|
T Consensus 598 lG~tf----sfPv~q-~~i~~~~L~~W 619 (917)
T 1cza_N 598 LGFTF----SFPCQQ-TSLDAGILITW 619 (917)
T ss_dssp EEEEE----CSCEEE-EETTEEEECCC
T ss_pred EEEEe----eccccc-cccCccEECce
Confidence 77765 346664 22111244578
No 64
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=96.03 E-value=0.032 Score=55.45 Aligned_cols=84 Identities=14% Similarity=0.086 Sum_probs=67.3
Q ss_pred CHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhc---CCceeecC----CC
Q 009868 384 SKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLL---GSPVIRPA----DI 456 (523)
Q Consensus 384 ~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advl---g~pv~~~~----~~ 456 (523)
.++++.+++.+.++-.+...++...+..+ +++|.++||.+.|..+++.+.+.+ |.+|.+++ ..
T Consensus 221 ~~~diAasfq~~l~~~l~~~~~~a~~~~g----------~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D 290 (334)
T 3eno_A 221 AIEDISYSIQETAFAMLVEVLERALYVSG----------KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMD 290 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCCh
Confidence 57899999999999888887776655444 679999999999999999999988 77888754 35
Q ss_pred CccHHHHHHHHHHhccccCCh
Q 009868 457 ETTALGAAFAAGLAIGVFKEE 477 (523)
Q Consensus 457 e~~alGaA~lA~~~~G~~~~~ 477 (523)
.+.++|+|.....-.|...++
T Consensus 291 ~G~~iG~a~~~~~~~g~~~~~ 311 (334)
T 3eno_A 291 NGIMIAQAALLMYKSGVRMSV 311 (334)
T ss_dssp CTHHHHHHHHHHHHTTCCCCG
T ss_pred HHHHHHHHHHHHHHcCCCCCc
Confidence 677889988777767765554
No 65
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=95.95 E-value=0.0079 Score=57.31 Aligned_cols=67 Identities=15% Similarity=0.229 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHH
Q 009868 382 FTSKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTAL 461 (523)
Q Consensus 382 ~~~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~al 461 (523)
..|..-|-..++-|.+..+..+++++++.. + .-+|+++||.++ +++. +..+..+ .++-+..
T Consensus 180 ~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~--~--------~~~vi~TGG~a~------~l~~-~~~~~~~--~~~L~l~ 240 (249)
T 3bex_A 180 KDTEENIRLGVVNGSVYALEGIIGRIKEVY--G--------DLPVVLTGGQSK------IVKD-MIKHEIF--DEDLTIK 240 (249)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--C--------CCCEEEESTTSG------GGGG-GSCCSEE--CTTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHc--C--------CCEEEEECCChH------HHhc-CCCCcEE--CcCcHHH
Confidence 468888999999999999999999988754 3 357999999874 3344 5544443 3455666
Q ss_pred HHHHHH
Q 009868 462 GAAFAA 467 (523)
Q Consensus 462 GaA~lA 467 (523)
|-.++.
T Consensus 241 GL~~i~ 246 (249)
T 3bex_A 241 GVYHFC 246 (249)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665543
No 66
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=95.78 E-value=0.049 Score=54.06 Aligned_cols=85 Identities=13% Similarity=0.067 Sum_probs=66.0
Q ss_pred CCHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhc---CCceeecC----C
Q 009868 383 TSKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLL---GSPVIRPA----D 455 (523)
Q Consensus 383 ~~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advl---g~pv~~~~----~ 455 (523)
..++++.+++.+.++-.+...++.+.+..+ .++|.++||.+.|..+++.+.+.+ |.+|.+++ .
T Consensus 215 ~~~~diAa~fq~~l~~~l~~~~~~~~~~~~----------~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~ 284 (330)
T 2ivn_A 215 YRVEDLAYSFQETAFAALVEVTERAVAHTE----------KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCR 284 (330)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCC
Confidence 468999999999999888888777655443 578999999999999999999887 67887755 3
Q ss_pred CCccHHHHHHHHHHhccccCCh
Q 009868 456 IETTALGAAFAAGLAIGVFKEE 477 (523)
Q Consensus 456 ~e~~alGaA~lA~~~~G~~~~~ 477 (523)
..+.++|+|.......|...++
T Consensus 285 D~G~~iG~a~~~~~~~~~~~~~ 306 (330)
T 2ivn_A 285 DNGAMIAYTGLRMYKAGISFRL 306 (330)
T ss_dssp SCHHHHHHHHHHHHHTTCCCCG
T ss_pred hhHHHHHHHHHHHHhcCCCCCc
Confidence 4566889888766555554444
No 67
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=95.73 E-value=0.017 Score=61.65 Aligned_cols=77 Identities=18% Similarity=0.202 Sum_probs=55.1
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcC-Cceeec-CCCCccHHHHH
Q 009868 387 HIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLG-SPVIRP-ADIETTALGAA 464 (523)
Q Consensus 387 ~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg-~pv~~~-~~~e~~alGaA 464 (523)
+++..+++.+.-.++..++. .+..+ .+++.|+++||+++.|.+.+.+.+.|+ +++... +..++.|+|||
T Consensus 304 ~l~~~~~~~i~~~i~~~L~~----a~~~~-----~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa 374 (554)
T 1yuw_A 304 ELNADLFRGTLDPVEKALRD----AKLDK-----SQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAA 374 (554)
T ss_dssp HHTHHHHHHTTHHHHHHHHH----TTCCG-----GGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----cCCCh-----hhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHH
Confidence 34555555555444444433 23221 128999999999999999999999996 777654 56788999999
Q ss_pred HHHHHhcc
Q 009868 465 FAAGLAIG 472 (523)
Q Consensus 465 ~lA~~~~G 472 (523)
+.|+.-.|
T Consensus 375 ~~a~~l~~ 382 (554)
T 1yuw_A 375 VQAAILSG 382 (554)
T ss_dssp HHHHHTTS
T ss_pred HHHHHhcC
Confidence 99987555
No 68
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=95.70 E-value=0.021 Score=54.92 Aligned_cols=71 Identities=15% Similarity=0.118 Sum_probs=53.4
Q ss_pred CCCHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHH
Q 009868 382 FTSKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTAL 461 (523)
Q Consensus 382 ~~~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~al 461 (523)
..|..-|-..++-|.+..+..+++++++..+. .-+|+++||.+ ++++..+..+..+ .++-+..
T Consensus 182 ~nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~---------~~~vi~TGG~a------~~l~~~~~~~~~~--~~~LvL~ 244 (268)
T 2h3g_X 182 KNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQ---------EPKVIATGGLA------KLISEESNVIDVV--DPFLTLK 244 (268)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS---------CCEEEEESTTH------HHHHHHCSSCSEE--CTTHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------CCEEEEECCCH------HHHHhhCCCCCEE--CcchHHH
Confidence 46888899999999999999999999876553 35799999976 4556667665554 3466778
Q ss_pred HHHHHHHH
Q 009868 462 GAAFAAGL 469 (523)
Q Consensus 462 GaA~lA~~ 469 (523)
|-.++...
T Consensus 245 GL~~i~~~ 252 (268)
T 2h3g_X 245 GLYMLYER 252 (268)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88777654
No 69
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=95.66 E-value=0.022 Score=61.04 Aligned_cols=82 Identities=18% Similarity=0.173 Sum_probs=57.7
Q ss_pred CceEEEEecCCCCceEEEEcC-CCCEEEEEEeeeeeccCCCC------eEE---eCHHHHHHHHHHHHHHHHHHHh-hCC
Q 009868 6 EVFIGAIDQGTTSTRFIIYDH-QARPIGSHQVEFTQFYPEAG------WVE---HEPMEILESVRVCMAKALDKAT-ADG 74 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~-~g~i~~~~~~~~~~~~~~~g------~~e---~d~~~~~~~~~~~l~~~~~~~~-~~~ 74 (523)
..|-++||||||.+.+.|+|. +|+++++.+..+|+...... ++. ...+++-+++.+.+.++++++. +.+
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~~~~ 284 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCKEHG 284 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 357799999999999999995 89999999888876433221 121 1234555666666666666542 257
Q ss_pred CCcccCceEEEEcc
Q 009868 75 HNVDSGLKAIGLTN 88 (523)
Q Consensus 75 ~~~~~~I~aIgis~ 88 (523)
+++++ |..+.|++
T Consensus 285 i~~~~-I~~~~v~G 297 (631)
T 3zyy_X 285 VEKKE-IMAAVVAG 297 (631)
T ss_dssp CCGGG-EEEEEEEE
T ss_pred CCHHH-eeEEEEEc
Confidence 88888 88887765
No 70
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=95.60 E-value=0.037 Score=56.84 Aligned_cols=62 Identities=15% Similarity=0.179 Sum_probs=47.4
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhh-----hccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecC
Q 009868 385 KAHIARAVLESMCFQVKDVLDSMQKD-----AVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPA 454 (523)
Q Consensus 385 ~~~l~rAv~Egia~~~r~~l~~l~~~-----~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~ 454 (523)
-.+++++.+|-+.-.++..++...-. .... ++.|+++||+|+-+.+.+++++.||+||.+..
T Consensus 294 l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~--------~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~ 360 (419)
T 4a2a_A 294 LSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGI--------PGGVVLTGGGAKIPRINELATEVFKSPVRTGC 360 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCC----------------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccccccccc--------CCEEEEECchhchhhHHHHHHHHHCCCeEEEe
Confidence 45677788888888887777655310 0122 67899999999999999999999999998755
No 71
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=95.58 E-value=0.0067 Score=60.56 Aligned_cols=45 Identities=22% Similarity=0.245 Sum_probs=40.5
Q ss_pred cEEEEecCccccHHHHHHHHhhcCCceeecC-CCCccHHHHHHHHH
Q 009868 424 FLLRVDGGATVNNLLMQIQADLLGSPVIRPA-DIETTALGAAFAAG 468 (523)
Q Consensus 424 ~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~-~~e~~alGaA~lA~ 468 (523)
+.|+++||+++.+.+.+.+.+.|+.||.+.. ..++.|+|||++|.
T Consensus 279 ~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~ 324 (344)
T 1jce_A 279 RGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLD 324 (344)
T ss_dssp HCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGG
T ss_pred CcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHh
Confidence 5899999999999999999999999998864 67788999998775
No 72
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=95.37 E-value=0.053 Score=59.59 Aligned_cols=79 Identities=19% Similarity=0.196 Sum_probs=63.5
Q ss_pred CCHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhc---CCceeecC----C
Q 009868 383 TSKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLL---GSPVIRPA----D 455 (523)
Q Consensus 383 ~~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advl---g~pv~~~~----~ 455 (523)
.+++++.+++.++++-.+......+.+..| +++|.++||.++|..+++.+...+ |.+|..+. .
T Consensus 664 ~~~~dIAasFq~ala~~L~~~~~~a~~~~g----------~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~ 733 (761)
T 3vth_A 664 FEKSYISAKFHNTVVNFTYDLANLIRKETG----------INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCN 733 (761)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCC
Confidence 578899999999998888887776655444 678999999999999999999887 78887754 4
Q ss_pred CCccHHHHHHHHHHhc
Q 009868 456 IETTALGAAFAAGLAI 471 (523)
Q Consensus 456 ~e~~alGaA~lA~~~~ 471 (523)
..+.|+|.|++|+...
T Consensus 734 DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 734 DGGISLGQAVIANKIL 749 (761)
T ss_dssp GGGHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHh
Confidence 4566899999987543
No 73
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=95.33 E-value=0.13 Score=51.26 Aligned_cols=105 Identities=18% Similarity=0.099 Sum_probs=67.6
Q ss_pred CCCHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcC-CceeecCC-----
Q 009868 382 FTSKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLG-SPVIRPAD----- 455 (523)
Q Consensus 382 ~~~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg-~pv~~~~~----- 455 (523)
..+++|+.+-+.|=.|.++.+.++.+. .. +++|+++|||++|+.+++.++..+. .+|...+.
T Consensus 255 ~ls~~Dv~ATLt~~TA~sIa~~~~~~~----~~--------~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~ 322 (371)
T 3qbx_A 255 ALPAADIQATLLELSARSISESLLDAQ----PD--------CEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPP 322 (371)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHC----TT--------CCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhcc----CC--------CceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCCh
Confidence 357899999998888877776665542 23 6899999999999999999999985 77776542
Q ss_pred CCccHHHHHHHHHHhc-cccCChhHHhcccCCCCCcEEeCCCCH
Q 009868 456 IETTALGAAFAAGLAI-GVFKEEEIFDSGERTKTSTTFKPVLNE 498 (523)
Q Consensus 456 ~e~~alGaA~lA~~~~-G~~~~~~~a~~~~~~~~~~~~~P~~~~ 498 (523)
.---|+.-|.+|...+ |.-.++...-..-.......+.|--..
T Consensus 323 d~~EA~aFA~LA~~~l~g~p~~lp~vTGA~~~~~lG~i~p~~~~ 366 (371)
T 3qbx_A 323 AWMEGMAFAWLAHRFLERLPGNCPDVTGALGPRTLGALYPAGSH 366 (371)
T ss_dssp TTHHHHHHHHHHHHHHTTCCCSCHHHHCCSSCCCCCEEECC---
T ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcccCCCCCccCceeccCCCc
Confidence 1122566677776654 444455443111111244567776543
No 74
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=95.16 E-value=0.015 Score=62.75 Aligned_cols=50 Identities=24% Similarity=0.280 Sum_probs=44.0
Q ss_pred ccEEEEecCccccHHHHHHHHhhcCCceeec-CCCCccHHHHHHHHHHhcc
Q 009868 423 EFLLRVDGGATVNNLLMQIQADLLGSPVIRP-ADIETTALGAAFAAGLAIG 472 (523)
Q Consensus 423 ~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~-~~~e~~alGaA~lA~~~~G 472 (523)
++.|+++||+++.|.+.+.+.+.||+++... +..++.|+|||+.|+.-.|
T Consensus 334 i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~ 384 (605)
T 2kho_A 334 IDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTG 384 (605)
T ss_dssp CSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTT
T ss_pred CceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcC
Confidence 8999999999999999999999999887654 4678889999999986555
No 75
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=95.05 E-value=0.046 Score=60.33 Aligned_cols=84 Identities=17% Similarity=0.190 Sum_probs=65.4
Q ss_pred CCHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhc---CCceeec----CC
Q 009868 383 TSKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLL---GSPVIRP----AD 455 (523)
Q Consensus 383 ~~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advl---g~pv~~~----~~ 455 (523)
.+++++.+++.+.++-.+...+..+.+.+| ++.|.++||.+.|..+++.+.+.+ |..|.++ ..
T Consensus 676 ~~~~dIAasfQ~al~~~L~~~~~~a~~~tg----------~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~n 745 (772)
T 4g9i_A 676 ASPADIAYSAHLALARAFAHTAVERAREFG----------VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRG 745 (772)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTT----------CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCC
Confidence 467889999888888888777776655444 678999999999999999998876 5667664 34
Q ss_pred CCccHHHHHHHHHHhccccCC
Q 009868 456 IETTALGAAFAAGLAIGVFKE 476 (523)
Q Consensus 456 ~e~~alGaA~lA~~~~G~~~~ 476 (523)
..+.|+|.|++|+..+.-|.+
T Consensus 746 DgGiALGQA~iA~~~L~~~l~ 766 (772)
T 4g9i_A 746 DNGVNVGQAFLGGLYLEGYLT 766 (772)
T ss_dssp GGGHHHHHHHHHHHHHHTSSC
T ss_pred cchHHHHHHHHHHHHHhccCc
Confidence 556799999999887754443
No 76
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=94.94 E-value=0.086 Score=56.81 Aligned_cols=135 Identities=16% Similarity=0.063 Sum_probs=87.3
Q ss_pred hhchhHHHHHHHHHcCCC-C--CHH-----HHHHHHHhcCCCCceEEEcCC-CCCCCCCCCCCCceeEEcC-CCCCCHHH
Q 009868 318 IAIAGAAVQWLRDSLGII-S--SAS-----EIEELALQVNSTGGVYFVPAF-NGLFAPWWRDDARGVCIGI-TRFTSKAH 387 (523)
Q Consensus 318 ~~~~G~~l~w~~~~~~~~-~--~~~-----~l~~~a~~~~~~~gl~~~P~l-~G~r~P~~~~~arg~~~gl-~~~~~~~~ 387 (523)
+++.|..++-+...+|.. . +|+ +|+.+|.+... ..+-+|+- .+. ..|. ++.+..+ ....++++
T Consensus 502 tSS~GRLFDavAalLGl~~~~~~YEGqaA~~LEalA~~~~~--~~~~lp~~i~~~---~ld~--s~l~~~ll~~g~~~~d 574 (657)
T 3ttc_A 502 ASSCGRLFDAVAAALGCAPATLSYEGEAACALEALAASCDG--VTHPVTMPRVDN---QLDL--ATFWQQWLNWQAPVNQ 574 (657)
T ss_dssp EEEHHHHHHHHHHHHTCSCSSCSSTTHHHHHHHHHHHTCCC--CCCCCCCCEETT---EECH--HHHHHHHHTCCCCHHH
T ss_pred cCccchHHHHHHHHcCCCCccCccCchhHHHHHHHHhhCCC--ccCCceeeccCC---cccH--HHHHHHHHHcCCCHHH
Confidence 346788888888777763 2 232 47777754311 11001111 010 0110 1111111 12467899
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhc-CCceeecC----CCCccHHH
Q 009868 388 IARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLL-GSPVIRPA----DIETTALG 462 (523)
Q Consensus 388 l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advl-g~pv~~~~----~~e~~alG 462 (523)
+.+++.++++-.+...++.+.+..| +++|.++||.++|..+++.+...+ |.+|..+. ...+.++|
T Consensus 575 IAasFh~ala~~L~~~~~ra~~~~g----------~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLG 644 (657)
T 3ttc_A 575 RAWAFHDALAQGFAALMREQATMRG----------ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLG 644 (657)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTT----------CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC----------CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHH
Confidence 9999999999998888777655443 679999999999999999999998 78887642 45577899
Q ss_pred HHHHHHH
Q 009868 463 AAFAAGL 469 (523)
Q Consensus 463 aA~lA~~ 469 (523)
-|++|+.
T Consensus 645 QA~~a~~ 651 (657)
T 3ttc_A 645 QGVIAAA 651 (657)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998863
No 77
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=94.62 E-value=0.075 Score=53.52 Aligned_cols=63 Identities=16% Similarity=0.115 Sum_probs=50.7
Q ss_pred CHHHHHHHHHhhhhhHHHHHHHHHHhhh-ccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecC
Q 009868 384 SKAHIARAVLESMCFQVKDVLDSMQKDA-VEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPA 454 (523)
Q Consensus 384 ~~~~l~rAv~Egia~~~r~~l~~l~~~~-g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~ 454 (523)
.-.++++..++.++-.++..++.+.... ... ++.|+++||+++.+.+.+.+++.|+.||.+..
T Consensus 275 ~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~--------~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~ 338 (377)
T 2ych_A 275 RIYDAIRPVLVELTQELRRSLEFFRIQLEEAS--------PEVGYLLGGGSKLRGLASLLTDTLGVNLEPVN 338 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHC---C--------CSEEEEESGGGGSTTHHHHHHHHHTSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC--------cCEEEEECccccchhHHHHHHHHhCCCeEecC
Confidence 4567788888999888888887653211 224 89999999999999999999999999999863
No 78
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=94.01 E-value=0.15 Score=54.03 Aligned_cols=80 Identities=21% Similarity=0.157 Sum_probs=63.5
Q ss_pred CHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCC-ceeecC--CCCccH
Q 009868 384 SKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGS-PVIRPA--DIETTA 460 (523)
Q Consensus 384 ~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~-pv~~~~--~~e~~a 460 (523)
..+++.++..+.++-.+...+..+.+..| +++|.++||.+.|..+++.+....+. .|.++. ...+.+
T Consensus 279 ~~~dIAasfQ~~l~~~L~~~~~~a~~~tg----------~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~a 348 (576)
T 3ven_A 279 EYRDLAATAQAALERAVFGLADSVLARTG----------ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVS 348 (576)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHT----------CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHH
Confidence 37899999999998888887776655444 67999999999999999999887765 666543 456778
Q ss_pred HHHHHHHHHhccc
Q 009868 461 LGAAFAAGLAIGV 473 (523)
Q Consensus 461 lGaA~lA~~~~G~ 473 (523)
+|+|+.+....|.
T Consensus 349 iGqA~~a~~~~g~ 361 (576)
T 3ven_A 349 LGAAAAVAVELGD 361 (576)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC
Confidence 9999998876654
No 79
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=93.35 E-value=0.26 Score=49.10 Aligned_cols=83 Identities=23% Similarity=0.221 Sum_probs=58.1
Q ss_pred CHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhc-CCceeecCC-----CC
Q 009868 384 SKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLL-GSPVIRPAD-----IE 457 (523)
Q Consensus 384 ~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advl-g~pv~~~~~-----~e 457 (523)
+++|+.+-+.|=.|.++.+.++.+ . . .++|+++|||++|+.+++.++..+ +.+|...+. .-
T Consensus 264 ~~~Dv~ATLt~~TA~sIa~~~~~~----~-~--------~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~ 330 (370)
T 3cqy_A 264 NEEDIQSTLLDLTCHSIAQDILKL----A-Q--------EGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKW 330 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH----C-S--------SEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhc----C-C--------CCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhH
Confidence 689999999887777777666544 2 3 579999999999999999999999 457765431 11
Q ss_pred ccHHHHHHHHHHhc-cccCChhH
Q 009868 458 TTALGAAFAAGLAI-GVFKEEEI 479 (523)
Q Consensus 458 ~~alGaA~lA~~~~-G~~~~~~~ 479 (523)
--|+.-|.+|...+ |.-.++..
T Consensus 331 ~EA~aFA~LA~~~l~g~p~nlp~ 353 (370)
T 3cqy_A 331 AEGIAFAWLAMRYQLGLPANLPA 353 (370)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCCc
Confidence 22455566766554 44444443
No 80
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=92.64 E-value=0.081 Score=54.30 Aligned_cols=82 Identities=17% Similarity=0.212 Sum_probs=49.1
Q ss_pred Cccc-CCceEEEEecCCCCceEEEEcCC--C-CEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCC
Q 009868 1 MAKA-KEVFIGAIDQGTTSTRFIIYDHQ--A-RPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHN 76 (523)
Q Consensus 1 m~~~-~~~~~lgIDiGtt~~K~~l~d~~--g-~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~ 76 (523)
|.+| +..+++||||||+++|+++...+ | ++++....+.. -=..| .-.|.+...+++.++++++-+. .+..
T Consensus 1 ~~~m~~~~~ivglDIGts~I~~vv~~~~~~~~~i~g~~~~~s~--gv~~G-~I~di~~~~~~I~~av~~ae~~---~g~~ 74 (419)
T 4a2a_A 1 MIDLSKTVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSR--GLDEG-EIKDAIAFKESVNTLLKELEEQ---LQKS 74 (419)
T ss_dssp ------CCEEEEEEECSSEEEEEEEEC----CEEEEEEEEECC--SEETT-EESBHHHHHHHHHHHHHHHHHH---HTSC
T ss_pred CCCCccCCEEEEEEccCCEEEEEEEEEcCCCCEEEEEEEeccC--CeeCC-EEEcHHHHHHHHHHHHHHHHHH---cCCC
Confidence 5665 35689999999999999999743 3 67766655422 11233 3568888888888888777554 2433
Q ss_pred cccCceEEEEccc
Q 009868 77 VDSGLKAIGLTNQ 89 (523)
Q Consensus 77 ~~~~I~aIgis~~ 89 (523)
..+ =..+++++.
T Consensus 75 i~~-~v~v~i~g~ 86 (419)
T 4a2a_A 75 LRS-DFVISFSSV 86 (419)
T ss_dssp CCS-EEEEEECCT
T ss_pred cCc-eEEEEEcCC
Confidence 211 145566553
No 81
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=92.18 E-value=0.17 Score=49.67 Aligned_cols=43 Identities=9% Similarity=-0.023 Sum_probs=35.7
Q ss_pred ccEEEEecCccccHHHHHHHHhhcCC---ceeecC-CCCccHHHHHHHH
Q 009868 423 EFLLRVDGGATVNNLLMQIQADLLGS---PVIRPA-DIETTALGAAFAA 467 (523)
Q Consensus 423 ~~~i~~~GG~a~s~~~~qi~Advlg~---pv~~~~-~~e~~alGaA~lA 467 (523)
++.|+++||+|+- +.+.+.+.++. ++.++. +.++.|+|+++.+
T Consensus 273 ~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 7899999999864 88999999998 577655 5668899999864
No 82
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=91.99 E-value=0.33 Score=48.01 Aligned_cols=74 Identities=14% Similarity=0.172 Sum_probs=49.2
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEE-eCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEE
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVE-HEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGL 86 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e-~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgi 86 (523)
++||||.++..++++|++. |++++.....+. .+..|+.. .....-.+.+...+++++++ .++++++ |.+|++
T Consensus 2 ~iLgIdts~~~~~val~~~-g~i~~~~~~~~~--~~~gg~~p~~~~~~h~~~l~~~i~~~L~~---agi~~~d-id~Ia~ 74 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSE-DKVLANVFDTLT--TEKGGIHPKEAAEHHARLMKPLLRKALSE---AGVSLDD-IDVIAF 74 (330)
T ss_dssp CEEEEECSSSEEEEEEECS-SCEEEEEEEECC--CTTCCCCHHHHHHHHHHHHHHHHHHHHHH---HTCCTTT-CCEEEE
T ss_pred EEEEEEccCCCeEEEEEEC-CEEEEEEEEEee--cccCCcCchhhHHHHHHHHHHHHHHHHHH---cCCCHHH-CcEEEE
Confidence 5899999999999999974 578865444332 33334321 11222344556677777776 5788889 999987
Q ss_pred cc
Q 009868 87 TN 88 (523)
Q Consensus 87 s~ 88 (523)
+.
T Consensus 75 ~~ 76 (330)
T 2ivn_A 75 SQ 76 (330)
T ss_dssp EE
T ss_pred EC
Confidence 64
No 83
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=91.85 E-value=0.26 Score=49.50 Aligned_cols=57 Identities=9% Similarity=0.078 Sum_probs=36.6
Q ss_pred ceEEEEecCCCCceEEEEcCCCC--EEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHH
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQAR--PIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAK 65 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~--i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~ 65 (523)
..++|||||||++|++++. +|+ +......++|...-..| .-.|++.+.+++.+++++
T Consensus 13 ~~~vgiDiGt~~i~~~~~~-~~~~~i~~~g~~~~ps~~~~~g-~i~d~~~~~~~ik~~~~~ 71 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVS-GNPPALKALASRPTPPGLLMEG-MVAEPAALAQEIKELLLE 71 (377)
T ss_dssp CCCEEEEECSSEEEEEEEE-TTTTEEEEEEEEECCTTSEETT-EESCHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCeEEEEEEe-CCceEEEEEEeEECCCCcccCC-CcCCHHHHHHHHHHHHHH
Confidence 4678999999999999996 555 44444555442221234 345788766666655544
No 84
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=91.60 E-value=7.5 Score=37.00 Aligned_cols=47 Identities=11% Similarity=0.038 Sum_probs=30.8
Q ss_pred ccEEEEecCccccHHHHHHHHhhc------------CCceeecC-CCCccHHHHHHHHHH
Q 009868 423 EFLLRVDGGATVNNLLMQIQADLL------------GSPVIRPA-DIETTALGAAFAAGL 469 (523)
Q Consensus 423 ~~~i~~~GG~a~s~~~~qi~Advl------------g~pv~~~~-~~e~~alGaA~lA~~ 469 (523)
++.|++.||.+..+.+.+.+...+ ..+|.... ..++.++|||.++..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 678999999886665544333221 24566555 456788999998754
No 85
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=90.93 E-value=0.76 Score=47.06 Aligned_cols=58 Identities=16% Similarity=0.225 Sum_probs=39.7
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHH
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDK 69 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~ 69 (523)
.+++||+|+||+|+++++..|.+ ...+..++ .|..- ..-..+++++.+.+++.+.+++
T Consensus 60 ~~LAlDlGGTn~RV~~V~l~g~~-~~~~~~~~--ip~~~-~~g~~~~LFd~Ia~~i~~fl~~ 117 (445)
T 3hm8_A 60 DFLALDLGGTNFRVLLVRVTTGV-QITSEIYS--IPETV-AQGSGQQLFDHIVDCIVDFQQK 117 (445)
T ss_dssp EEEEEEESSSSEEEEEEEESSSE-EEEEEEEC--CCHHH-HTSBHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCeEEEEEEEECCce-EEEEEEec--cCccc-cCCCHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999987762 22222222 11100 0114678999999999998876
No 86
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=90.82 E-value=0.21 Score=49.08 Aligned_cols=46 Identities=17% Similarity=0.003 Sum_probs=35.0
Q ss_pred ccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHHHHHHHHHH
Q 009868 423 EFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTALGAAFAAGL 469 (523)
Q Consensus 423 ~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~ 469 (523)
.+.|.++|...-.+++.+.++ .+|.++...+..+++..|-..++..
T Consensus 259 ~~~V~LiG~~~L~~~Y~~AL~-~~G~~~~~~d~d~a~~~GL~~~a~~ 304 (330)
T 3t69_A 259 VDGVCLVGSGGLGTLYRTALE-SQGLNVRAVDADEAVRAGLSAAARA 304 (330)
T ss_dssp CCEEEEEECHHHHHHHHHHHH-HTTCEEEEEEHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCHHHHHHHHHHHH-HcCCCceeeCHHHHHHHHHHHHHHH
Confidence 367999999998888888886 4899998877666666676555443
No 87
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=90.58 E-value=7.9 Score=37.57 Aligned_cols=70 Identities=13% Similarity=0.060 Sum_probs=41.5
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCcccc-HHHHHHHHhhc----------CCceeecC-CCC
Q 009868 390 RAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVN-NLLMQIQADLL----------GSPVIRPA-DIE 457 (523)
Q Consensus 390 rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s-~~~~qi~Advl----------g~pv~~~~-~~e 457 (523)
+.+++-.+..+...+..+... .. ++.|++.||.+++ +.+.+.+...+ ..+|.... ..+
T Consensus 238 ~~~~~~~~~~La~~i~~l~~~--ld--------P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~ 307 (321)
T 3r8e_A 238 LAVWADIGTIIGESLVNIVRV--MD--------LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLEND 307 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--HC--------CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HC--------CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCc
Confidence 344554555555554444332 34 6889999999875 55544443322 23455555 346
Q ss_pred ccHHHHHHHHHH
Q 009868 458 TTALGAAFAAGL 469 (523)
Q Consensus 458 ~~alGaA~lA~~ 469 (523)
++++|||.++..
T Consensus 308 a~~~GAa~l~~~ 319 (321)
T 3r8e_A 308 AGLLGAAGLIME 319 (321)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 788999998753
No 88
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=90.49 E-value=0.24 Score=47.90 Aligned_cols=37 Identities=30% Similarity=0.232 Sum_probs=31.2
Q ss_pred ccCCceEEEEecCCCCceEEEEcCCCCEEEEEEeeeee
Q 009868 3 KAKEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQ 40 (523)
Q Consensus 3 ~~~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~ 40 (523)
|.|..++|+||-||||+|+-++| +|+++.+.+.+-..
T Consensus 2 ~~m~~~~IavDWGTs~lRa~l~~-~g~vl~~~~~~~Gv 38 (295)
T 3nuw_A 2 NAMTARYIAIDWGSTNLRAWLYQ-GEECLESRQSEAGV 38 (295)
T ss_dssp CGGGCEEEEEEECSSCEEEEEEE-TTEEEEEEEESCCT
T ss_pred CCCCccEEEEEecchheeeeeec-CCceehhhcCCCch
Confidence 55667899999999999999999 89999887766543
No 89
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=90.02 E-value=5.9 Score=38.64 Aligned_cols=46 Identities=17% Similarity=0.223 Sum_probs=30.2
Q ss_pred ccEEEEecCccccHHHHHHHHhhc---------CCceeecC-CCCccHHHHHHHHH
Q 009868 423 EFLLRVDGGATVNNLLMQIQADLL---------GSPVIRPA-DIETTALGAAFAAG 468 (523)
Q Consensus 423 ~~~i~~~GG~a~s~~~~qi~Advl---------g~pv~~~~-~~e~~alGaA~lA~ 468 (523)
++.|++.||.++.+.+.+.+...+ ..+|.... ..+++++|||.++.
T Consensus 270 p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~l 325 (327)
T 4db3_A 270 PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLNI 325 (327)
T ss_dssp CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTTC
T ss_pred CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHHh
Confidence 688999999987665555444333 22344444 35678899998763
No 90
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=89.30 E-value=1.5 Score=46.44 Aligned_cols=85 Identities=11% Similarity=0.030 Sum_probs=59.5
Q ss_pred CCHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhc---CCceeecC----C
Q 009868 383 TSKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLL---GSPVIRPA----D 455 (523)
Q Consensus 383 ~~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advl---g~pv~~~~----~ 455 (523)
.+++++.+++.+.++-.+....+...+..| +++|.++||.+.|..+++.+...+ |.+|..++ .
T Consensus 219 ~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~----------~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~~~~~~ 288 (540)
T 3en9_A 219 ERLEDICYSLQEYAFSMLTEITERALAHTN----------KGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCG 288 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------CSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCCHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCCCcCCC
Confidence 357899999999988888777766544444 579999999999999999999876 67788764 2
Q ss_pred CCccHHHHHHHHHHhccccCCh
Q 009868 456 IETTALGAAFAAGLAIGVFKEE 477 (523)
Q Consensus 456 ~e~~alGaA~lA~~~~G~~~~~ 477 (523)
..++.+|.+-.-....|...++
T Consensus 289 Dngamia~~~~~~~~~g~~s~l 310 (540)
T 3en9_A 289 DNGAMIAWLGLLMHKNGRWMSL 310 (540)
T ss_dssp SCHHHHHHHHHHHHHTCCCCCG
T ss_pred CCHHHHHHHHHHHHHcCCCCcc
Confidence 3333445443333334554444
No 91
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=87.53 E-value=1 Score=44.53 Aligned_cols=76 Identities=13% Similarity=0.230 Sum_probs=50.1
Q ss_pred CceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEe-CHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEE
Q 009868 6 EVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEH-EPMEILESVRVCMAKALDKATADGHNVDSGLKAI 84 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~-d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aI 84 (523)
++++||||-.+..+-++|++ ++++++....... .+..|.+.. ....-.+.+...+++++++ +++++++ |.+|
T Consensus 5 ~M~iLgIdts~~~~svAl~~-~~~i~~~~~~~~~--~~~gGv~p~~a~~~H~~~l~~~i~~~L~~---ag~~~~d-id~I 77 (334)
T 3eno_A 5 PMIVLGLEGTAHTISCGIID-ESRILAMESSMYR--PKTGGIRPLDAAVHHSEVIDTVISRALEK---AKISIHD-IDLI 77 (334)
T ss_dssp CCEEEEEECSSSEEEEEEEE-SSCCCEEEEEECC--CSSCSCCHHHHHHHHHHHHHHHHHHHHHH---HTCCGGG-CCEE
T ss_pred CceEEEEECCCcCeEEEEEE-CCEEEEEEEEeec--cccCCcCcchHHHHHHHHHHHHHHHHHHH---cCCCHHH-CCEE
Confidence 35799999888889999998 5578775443322 233343211 1223344566777777776 5788899 9999
Q ss_pred EEcc
Q 009868 85 GLTN 88 (523)
Q Consensus 85 gis~ 88 (523)
+++.
T Consensus 78 av~~ 81 (334)
T 3eno_A 78 GFSM 81 (334)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9865
No 92
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=86.87 E-value=1.2 Score=46.03 Aligned_cols=59 Identities=17% Similarity=0.334 Sum_probs=40.1
Q ss_pred eEEEEecCCCCceEEEEcCCCC-----EEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHH
Q 009868 8 FIGAIDQGTTSTRFIIYDHQAR-----PIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDK 69 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~-----i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~ 69 (523)
.+|+||+|+||.|+++++..|. .+...+..++ .|..- ..-..+++++.+.+++.+.+++
T Consensus 78 ~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~--Ip~~l-~~gt~~eLFd~IA~~i~~fl~~ 141 (470)
T 3f9m_A 78 DFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYS--IPEDA-MTGTAEMLFDYISECISDFLDK 141 (470)
T ss_dssp EEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEE--CCHHH-HSSBHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeec--CChHh-ccCCHHHHHHHHHHHHHHHHhh
Confidence 5789999999999999996543 2333333333 22110 0124689999999999999886
No 93
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=86.75 E-value=14 Score=35.42 Aligned_cols=72 Identities=22% Similarity=0.172 Sum_probs=41.7
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCcc-cc-HHHHHHHHhhcC--------CceeecC-CCC
Q 009868 389 ARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGAT-VN-NLLMQIQADLLG--------SPVIRPA-DIE 457 (523)
Q Consensus 389 ~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a-~s-~~~~qi~Advlg--------~pv~~~~-~~e 457 (523)
++.+++-.+..+...+..+... .. ++.|++.||.+ +. +.+.+.+...+. .+|..+. ..+
T Consensus 214 a~~~~~~~~~~l~~~i~~l~~~--~~--------p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~ 283 (302)
T 3vov_A 214 AERLVLQAARYVGIGLASLVKA--FD--------PGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAE 283 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HC--------CSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HC--------CCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCc
Confidence 3444555555555555444332 24 68899999988 63 544444433321 2255555 356
Q ss_pred ccHHHHHHHHHHh
Q 009868 458 TTALGAAFAAGLA 470 (523)
Q Consensus 458 ~~alGaA~lA~~~ 470 (523)
++++|||.++...
T Consensus 284 a~~~GAa~l~~~~ 296 (302)
T 3vov_A 284 AGLLGAALTAYLE 296 (302)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7889999988754
No 94
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=86.60 E-value=1.2 Score=43.58 Aligned_cols=78 Identities=13% Similarity=0.041 Sum_probs=44.2
Q ss_pred eEEEEecCCCCceEEEEcCC-CCEEEEEEeeeeeccCCCCeE---EeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceE
Q 009868 8 FIGAIDQGTTSTRFIIYDHQ-ARPIGSHQVEFTQFYPEAGWV---EHEPMEILESVRVCMAKALDKATADGHNVDSGLKA 83 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~-g~i~~~~~~~~~~~~~~~g~~---e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~a 83 (523)
.+.+||+||.++|..+++.+ +.+....+...+... ..|-. ..++ +-.+..++++++..+.++..++ ++ |.+
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrL-g~g~~~~g~ls~-eai~r~~~~L~~f~~~~~~~~v--~~-i~~ 87 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSL-GTKVKETGRLQE-DRIEETIQVLKEYKKLIDEFKV--ER-VKA 87 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCT-TTTHHHHSSCCH-HHHHHHHHHHHHHHHHHHHTTC--SE-EEE
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeec-CCCccccCCcCH-HHHHHHHHHHHHHHHHHHHCCC--Ce-EEE
Confidence 57889999999999999964 433222222222211 22211 1233 3445556677766655544443 46 777
Q ss_pred EEEcccc
Q 009868 84 IGLTNQR 90 (523)
Q Consensus 84 Igis~~~ 90 (523)
++.++.+
T Consensus 88 vATsA~R 94 (315)
T 1t6c_A 88 VATEAIR 94 (315)
T ss_dssp EECHHHH
T ss_pred EEcHHHH
Confidence 7777754
No 95
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=85.49 E-value=1.7 Score=42.59 Aligned_cols=78 Identities=19% Similarity=0.103 Sum_probs=45.0
Q ss_pred ceEEEEecCCCCceEEEEcCC-CCEEEEEEeeeeeccC----CCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCc
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQ-ARPIGSHQVEFTQFYP----EAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGL 81 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~-g~i~~~~~~~~~~~~~----~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I 81 (523)
+.+.+||+||.++|..+++.+ +.+....+...+.... ..| ..+++ -.+.+++++++..+.++..++ ++ |
T Consensus 4 ~~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g--~ls~e-ai~r~~~~L~~f~~~~~~~~v--~~-v 77 (315)
T 3mdq_A 4 QRIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKG--FITEE-AMDRALDTLKKFRVILDEHAV--VH-V 77 (315)
T ss_dssp CEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGT--CCCHH-HHHHHHHHHHHHHHHHHHTTC--CE-E
T ss_pred ceEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccC--CcCHH-HHHHHHHHHHHHHHHHHHcCC--CE-E
Confidence 457889999999999999853 4332222322222222 122 22343 345566677766655544443 46 7
Q ss_pred eEEEEcccc
Q 009868 82 KAIGLTNQR 90 (523)
Q Consensus 82 ~aIgis~~~ 90 (523)
.+++.++.+
T Consensus 78 ~~vATsA~R 86 (315)
T 3mdq_A 78 IATGTSAVR 86 (315)
T ss_dssp EEEECHHHH
T ss_pred EEEeeHHHH
Confidence 777777643
No 96
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=84.92 E-value=2.2 Score=41.03 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=45.9
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcC-CceeecCCCCccHHHHHHHH
Q 009868 389 ARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLG-SPVIRPADIETTALGAAFAA 467 (523)
Q Consensus 389 ~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg-~pv~~~~~~e~~alGaA~lA 467 (523)
++.+++-.+..+...+..+... .. ++.|++.||.++++.+.+.+...+. .+|..+...+++++|||.++
T Consensus 216 a~~il~~~~~~La~~i~~l~~~--l~--------p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~GAa~la 285 (299)
T 2e2o_A 216 AMDILKQGAELLASQAVYLARK--IG--------TNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDLGKRSPEIGAVILA 285 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HT--------CSEEEEESGGGGSHHHHHHHHHHHHHTTCEEECCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--cC--------CCEEEEECCccCcHHHHHHHHHHCCCCeEeccCCCCChHHHHHHHH
Confidence 3444555555554444444332 24 6789999999876666555555443 47777664467889999998
Q ss_pred HHh
Q 009868 468 GLA 470 (523)
Q Consensus 468 ~~~ 470 (523)
...
T Consensus 286 ~~~ 288 (299)
T 2e2o_A 286 YKE 288 (299)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 97
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=84.50 E-value=0.63 Score=44.91 Aligned_cols=28 Identities=14% Similarity=0.080 Sum_probs=21.5
Q ss_pred CCceEEEEecCCCCceEEEEcCCCCEEEE
Q 009868 5 KEVFIGAIDQGTTSTRFIIYDHQARPIGS 33 (523)
Q Consensus 5 ~~~~~lgIDiGtt~~K~~l~d~~g~i~~~ 33 (523)
...+.+|||+|+|.+|++++ ++++++..
T Consensus 18 ~~~~~iGIDiGsTt~K~V~~-~~~~i~~~ 45 (287)
T 2ews_A 18 GSHMKVGIDAGGTLIKIVQE-QDNQRTFK 45 (287)
T ss_dssp ---CEEEEEECSSEEEEEEE-CSSCEEEE
T ss_pred CCCeEEEEEEChhhEEEEEE-cCCEEEEE
Confidence 34578999999999999999 46777754
No 98
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=84.42 E-value=0.62 Score=45.68 Aligned_cols=68 Identities=12% Similarity=0.062 Sum_probs=45.6
Q ss_pred CHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCcee-----e-cC-CC
Q 009868 384 SKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVI-----R-PA-DI 456 (523)
Q Consensus 384 ~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~-----~-~~-~~ 456 (523)
+..++.+.++|-..-.+.+.++.+-+.. . +++|+++|++ +.+..-+|+. +|+. + ++ ..
T Consensus 247 ~~~~lA~~~~~~q~~~I~~av~~v~~~~--~--------~~~vv~aG~G---~~L~~~la~~--~~~~~~~~~i~~~~s~ 311 (334)
T 3cet_A 247 DAENIAKNYYELWKELILENVENVAEKY--G--------SKKVVITGLG---ENILKDALAD--FEVISVAERYGKDVSL 311 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH--C--------CCEEEEESTT---HHHHHHHTTT--SEEEEHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc--C--------CCeEEEeCCc---HHHHHHHHhh--CCeeehhcccCccccc
Confidence 4567888888877777777666554322 3 5689999988 3677777766 7776 3 22 23
Q ss_pred CccHHHHHHH
Q 009868 457 ETTALGAAFA 466 (523)
Q Consensus 457 e~~alGaA~l 466 (523)
-+.|+|+|++
T Consensus 312 vapA~avA~l 321 (334)
T 3cet_A 312 ATPSFAVAEL 321 (334)
T ss_dssp SHHHHHHHHH
T ss_pred ccCHHHHHHH
Confidence 3567888877
No 99
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=82.91 E-value=1.7 Score=43.11 Aligned_cols=68 Identities=16% Similarity=0.146 Sum_probs=44.0
Q ss_pred HHHHhhhhhHHHHHHHH-HHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCcee---ecCCCCccHHHHHH
Q 009868 390 RAVLESMCFQVKDVLDS-MQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVI---RPADIETTALGAAF 465 (523)
Q Consensus 390 rAv~Egia~~~r~~l~~-l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~---~~~~~e~~alGaA~ 465 (523)
+.+++.++-.+...++. +++ .... ++.|+++||+|+- +.+.+.+.|+.... ..++.++.|+|+..
T Consensus 272 ~~~i~~~~~~i~~~i~~~l~~-~~~~--------i~~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~ 340 (346)
T 2fsj_A 272 GPILEDLANRIIENIRLNLRG-EVDR--------VTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRD 340 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHGG-GGGG--------EEEEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-hhhc--------ccEEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHH
Confidence 55555555555554444 333 2223 7899999999975 78888999984432 22344788999987
Q ss_pred HHH
Q 009868 466 AAG 468 (523)
Q Consensus 466 lA~ 468 (523)
++.
T Consensus 341 ~~~ 343 (346)
T 2fsj_A 341 AAE 343 (346)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
No 100
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=82.69 E-value=1.4 Score=43.71 Aligned_cols=84 Identities=20% Similarity=0.158 Sum_probs=46.2
Q ss_pred CcccCCceEEEEecCCCCceEEEEcCC--CCEEEEEEeeeeeccCCCCeE---EeCHHHHHHHHHHHHHHHHHHHhhCCC
Q 009868 1 MAKAKEVFIGAIDQGTTSTRFIIYDHQ--ARPIGSHQVEFTQFYPEAGWV---EHEPMEILESVRVCMAKALDKATADGH 75 (523)
Q Consensus 1 m~~~~~~~~lgIDiGtt~~K~~l~d~~--g~i~~~~~~~~~~~~~~~g~~---e~d~~~~~~~~~~~l~~~~~~~~~~~~ 75 (523)
|++.+ +.+.+|||||.++|..+++.+ |.+....+...+... ..|-. ..++ +-.+.+++++++..+.++..+
T Consensus 11 ~~~~~-~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrL-g~g~~~~g~ls~-eai~r~~~aL~~f~~~~~~~~- 86 (343)
T 3cer_A 11 MSKES-VTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRL-GQDVDKTHRFAD-EALERAYVAAREFAGVIAEHP- 86 (343)
T ss_dssp ---CC-EEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCT-TTTHHHHSSCCH-HHHHHHHHHHHHHHHHHTTSC-
T ss_pred cCCCC-CeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeC-CCCccccCCcCH-HHHHHHHHHHHHHHHHHHHCC-
Confidence 44433 457889999999999999853 433222222222222 22211 1233 445566677777766654333
Q ss_pred CcccCceEEEEcccc
Q 009868 76 NVDSGLKAIGLTNQR 90 (523)
Q Consensus 76 ~~~~~I~aIgis~~~ 90 (523)
.++ |.+++.++.+
T Consensus 87 -v~~-v~~vATsA~R 99 (343)
T 3cer_A 87 -IDG-LRFVATSATR 99 (343)
T ss_dssp -CSE-EEEEECHHHH
T ss_pred -CCe-EEEEecHHHH
Confidence 346 7777777744
No 101
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=81.07 E-value=1.7 Score=43.89 Aligned_cols=51 Identities=12% Similarity=0.171 Sum_probs=37.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCcc-ccHHHHHHHHhhc
Q 009868 388 IARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGAT-VNNLLMQIQADLL 446 (523)
Q Consensus 388 l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a-~s~~~~qi~Advl 446 (523)
-.+-++|-.+|.++..+-.+.-..+-+ ++.|+++||.. +++.+++.+.+-|
T Consensus 313 ~A~lA~d~f~yri~k~IGa~aa~L~G~--------vDaIVFTgGIGEns~~vR~~v~~~l 364 (415)
T 3sk3_A 313 DAKRAMDVYCHRLAKYIGSYTALMDGR--------LDAVVFTGGIGENAAMVRELSLGKL 364 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGGSTTC--------CCEEEEEHHHHTTCHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCC--------CCEEEECCccccCCHHHHHHHHhhc
Confidence 356678999999999888775443334 79999999999 5666666666544
No 102
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=80.60 E-value=1.6 Score=41.77 Aligned_cols=67 Identities=15% Similarity=0.063 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCCCCccHH
Q 009868 382 FTSKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPADIETTAL 461 (523)
Q Consensus 382 ~~~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~~e~~al 461 (523)
..|..-|-..++-|.+..+..+++++++..+.+ -+|+++||.++ +++..+. +..+ .++-+..
T Consensus 201 ~nT~~ai~sGi~~g~~g~Ie~~i~~~~~e~~~~---------~~vi~TGG~a~------~l~~~~~-~~~~--d~~LvL~ 262 (271)
T 2f9w_A 201 QATAEAVERGCLLMLRGFVREQYAMACELLGPD---------CEIFLTGGDAE------LVRDELA-GARI--MPDLVFV 262 (271)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT---------CEEEEESTTGG------GTGGGCT-TCEE--CTTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---------CEEEEECCCHH------HHHhhCC-CCEE--CcChHHH
Confidence 468889999999999999999999998766533 57999999874 3445555 4333 2345555
Q ss_pred HHHHH
Q 009868 462 GAAFA 466 (523)
Q Consensus 462 GaA~l 466 (523)
|-.++
T Consensus 263 GL~~i 267 (271)
T 2f9w_A 263 GLALA 267 (271)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 103
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=80.60 E-value=5.9 Score=38.03 Aligned_cols=72 Identities=10% Similarity=0.054 Sum_probs=43.7
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcC------CceeecC-CCCccHH
Q 009868 389 ARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLG------SPVIRPA-DIETTAL 461 (523)
Q Consensus 389 ~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg------~pv~~~~-~~e~~al 461 (523)
++.+++-.+..+-..+-.+... .. ++.|++.||.++.+.+.+.+-..+. .+|.... ..+++++
T Consensus 214 a~~~~~~~~~~La~~i~~l~~~--~~--------p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~ 283 (297)
T 4htl_A 214 SERLITEFYTGICTGLYNLIYL--FD--------PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLL 283 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HC--------CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--hC--------CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHH
Confidence 3444554555554444444322 34 6889999999976656554444432 2455555 4568899
Q ss_pred HHHHHHHHh
Q 009868 462 GAAFAAGLA 470 (523)
Q Consensus 462 GaA~lA~~~ 470 (523)
|||.++...
T Consensus 284 GAa~l~~~~ 292 (297)
T 4htl_A 284 GAVYHFLQE 292 (297)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 999988754
No 104
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=80.39 E-value=0.69 Score=47.77 Aligned_cols=60 Identities=22% Similarity=0.386 Sum_probs=35.5
Q ss_pred CCceEEEEecCCCCceEEEEcCCC------CEEEEEEeeeeeccCCCCe--EEeCHHHHHHHHHHHHHHHH
Q 009868 5 KEVFIGAIDQGTTSTRFIIYDHQA------RPIGSHQVEFTQFYPEAGW--VEHEPMEILESVRVCMAKAL 67 (523)
Q Consensus 5 ~~~~~lgIDiGtt~~K~~l~d~~g------~i~~~~~~~~~~~~~~~g~--~e~d~~~~~~~~~~~l~~~~ 67 (523)
..+|.+.||+|++++|..|++.+. .++.... .... ..+|- ...+|+.+.+.+..+++.+.
T Consensus 32 ~~~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~~~~-~~~~--~~~Gls~~~~~pe~~~~~l~~Ll~~a~ 99 (456)
T 3cj1_A 32 ALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHS-SCDV--QGGGISSYANDPSKAGQSLVRCLEQAL 99 (456)
T ss_dssp CEEEEEEEEECSSCEEEEEEEEETTSTTSTTCCEEEE-EEEC--SSSCGGGGTTSTHHHHHHTHHHHHHHH
T ss_pred CceEEEEEEcCCCCeEEEEEEEcCCCCCCccceeeee-eeee--cccccccccCCHHHHHHHHHHHHHHHH
Confidence 346888999999999999998422 1332211 1111 12221 12468887777766666554
No 105
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=80.26 E-value=3.7 Score=40.26 Aligned_cols=72 Identities=18% Similarity=-0.008 Sum_probs=47.6
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCCceeecCC-CCccHHHHH
Q 009868 386 AHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGSPVIRPAD-IETTALGAA 464 (523)
Q Consensus 386 ~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~pv~~~~~-~e~~alGaA 464 (523)
.+.++..++-.+-.+...+... +.++.. ++.|+++||+|. ++.+.+.+.++.++.+++. ..+.|+|+.
T Consensus 251 ~~~i~~~~~e~~~~I~~~i~~~----~~~~~~-----~~~IvltGGGA~--l~~~~l~~~~~~~v~v~~~P~~a~a~G~~ 319 (329)
T 4apw_A 251 STVIKKVKEKFLKDAIKLIEKR----GFKLDQ-----LDSLIFIGGTTQ--KLKEQISKTYPNNSIITNNSQWTTCEGLY 319 (329)
T ss_dssp THHHHHHHHHHHHHHHHHHHHH----TCCTTS-----CSEEEEESTTHH--HHHHHHHHHSTTCEECCSSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc----CCCHHH-----ccEEEEECChHH--HHHHHHHHHcCCCCEecCCChhhHHHHHH
Confidence 4555555555554444433332 333211 579999999986 4679999999988988774 447788987
Q ss_pred HHHH
Q 009868 465 FAAG 468 (523)
Q Consensus 465 ~lA~ 468 (523)
.++.
T Consensus 320 ~~~~ 323 (329)
T 4apw_A 320 KVAV 323 (329)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
No 106
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=80.03 E-value=5.5 Score=34.89 Aligned_cols=54 Identities=13% Similarity=0.226 Sum_probs=36.4
Q ss_pred eEEEEecCCCCceEEEEcCCCC------EEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHH
Q 009868 8 FIGAIDQGTTSTRFIIYDHQAR------PIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDK 69 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~------i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~ 69 (523)
.+||||-|++.+=.+++|.+|+ .+....+.++ + ..+..+=+..+.+.+.+++++
T Consensus 2 rILGIDPGl~~tG~gvi~~~g~~~~~~~~v~~G~I~t~-----~---~~~~~~RL~~I~~~l~~~i~~ 61 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAVEGKGALKARLLHGEVVKTS-----P---QEPAKERVGRIHARVLEVLHR 61 (166)
T ss_dssp EEEEEECCSSEEEEEEEEECSSSSSCEEEEEEEEEECC-----T---TSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccccCceEEEEEEecCCccceEEEEEeCeEECC-----C---CCCHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999998775 2333333332 1 234444455667777777776
No 107
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=79.20 E-value=3.3 Score=45.51 Aligned_cols=31 Identities=16% Similarity=0.250 Sum_probs=27.0
Q ss_pred CceEEEEecC-CCCceEEEEcCCCCEEEEEEe
Q 009868 6 EVFIGAIDQG-TTSTRFIIYDHQARPIGSHQV 36 (523)
Q Consensus 6 ~~~~lgIDiG-tt~~K~~l~d~~g~i~~~~~~ 36 (523)
.+.++|||-| .|++|++++|.+|+++.....
T Consensus 328 ~~~vlg~dpg~r~g~k~a~vd~~G~~l~~~~i 359 (785)
T 3bzc_A 328 PRATLGLDPGLRTGVKVAVVDATGKLLDTATV 359 (785)
T ss_dssp SCCEEEEECCSSSCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEECCCCcCceEEEEECCCCCEEEEEEE
Confidence 4579999999 699999999999999987654
No 108
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=77.09 E-value=3.4 Score=43.30 Aligned_cols=78 Identities=14% Similarity=0.141 Sum_probs=46.8
Q ss_pred ceEEEEecCCCCceEEEEcC-CCCE--EEEEEeeeeec--cCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCc
Q 009868 7 VFIGAIDQGTTSTRFIIYDH-QARP--IGSHQVEFTQF--YPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGL 81 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~-~g~i--~~~~~~~~~~~--~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I 81 (523)
..+.+|||||.++|..+++. +|.+ +...+.+...- ....| ..+++ -.+..++++++..+.++. ...++ |
T Consensus 11 ~~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g--~Ls~e-ai~r~~~~L~~f~~~~~~--~~v~~-v 84 (513)
T 1u6z_A 11 QEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDN--MLSEE-AMTRGLNCLSLFAERLQG--FSPAS-V 84 (513)
T ss_dssp -CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTC--CBCHH-HHHHHHHHHHHHHHHTTT--CCGGG-E
T ss_pred CeEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccC--CcCHH-HHHHHHHHHHHHHHHHHh--CCCCE-E
Confidence 45788999999999999986 3433 33333333221 11223 23343 455566778777766543 34457 8
Q ss_pred eEEEEcccc
Q 009868 82 KAIGLTNQR 90 (523)
Q Consensus 82 ~aIgis~~~ 90 (523)
.+++.++.+
T Consensus 85 ~~vATsA~R 93 (513)
T 1u6z_A 85 CIVGTHTLR 93 (513)
T ss_dssp EEEECHHHH
T ss_pred EEEecHHHH
Confidence 888887755
No 109
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=76.80 E-value=8.2 Score=37.72 Aligned_cols=48 Identities=21% Similarity=0.041 Sum_probs=30.6
Q ss_pred EEEEecCcccc-HHHHHH----HHhhc-------CCceeecCCCCccHHHHHHHHHHhcc
Q 009868 425 LLRVDGGATVN-NLLMQI----QADLL-------GSPVIRPADIETTALGAAFAAGLAIG 472 (523)
Q Consensus 425 ~i~~~GG~a~s-~~~~qi----~Advl-------g~pv~~~~~~e~~alGaA~lA~~~~G 472 (523)
.|++.||.+++ +.+.+. +.... ..+|.+....+++++|||.++....+
T Consensus 268 ~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~a~~~GAa~la~~~~~ 327 (347)
T 2ch5_A 268 PILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSALGGASLGARHIG 327 (347)
T ss_dssp EEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESSCTHHHHHHHHHHTTT
T ss_pred eEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCCChHHHHHHHHHHhcC
Confidence 88999998864 444332 33321 23566555555889999999876554
No 110
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=76.63 E-value=8.3 Score=40.55 Aligned_cols=75 Identities=11% Similarity=0.153 Sum_probs=50.1
Q ss_pred CceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeC-HHHHHHHHHHHHHHHHHHHhhCCCCcccCceEE
Q 009868 6 EVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHE-PMEILESVRVCMAKALDKATADGHNVDSGLKAI 84 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aI 84 (523)
++++||||-.+..+-++|++.++++++....... .+..|-+... ...-.+.+...+++++++ +.+++ |.+|
T Consensus 5 ~m~iL~i~ts~~~~~~al~~~~~~~~~~~~~~~~--~~~gg~~p~~a~~~h~~~l~~~i~~~l~~-----~~~~~-id~i 76 (540)
T 3en9_A 5 PMICLGLEGTAEKTGVGIVTSDGEVLFNKTIMYK--PPKQGINPREAADHHAETFPKLIKEAFEV-----VDKNE-IDLI 76 (540)
T ss_dssp SCEEEEEECSSSEEEEEEEETTSCEEEEEEEECC--CCCSSSSCCCHHHHHHHHHHHHHHHHHHH-----SCGGG-CCEE
T ss_pred cceEEEEEcCccceEEEEEECCCeEEEEEEEeec--CCCCCCChHHHHHHHHHHHHHHHHHHHHh-----CCHhH-CcEE
Confidence 3579999999889999999988788887655432 2233432222 234455666666777665 34567 9999
Q ss_pred EEcc
Q 009868 85 GLTN 88 (523)
Q Consensus 85 gis~ 88 (523)
+++.
T Consensus 77 a~~~ 80 (540)
T 3en9_A 77 AFSQ 80 (540)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8764
No 111
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=75.81 E-value=6.7 Score=40.36 Aligned_cols=76 Identities=7% Similarity=-0.011 Sum_probs=46.6
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHH----Hhhc--------CCceeecCC
Q 009868 388 IARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQ----ADLL--------GSPVIRPAD 455 (523)
Q Consensus 388 l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~----Advl--------g~pv~~~~~ 455 (523)
+.++|.+=.|.-+...+-.+-...+.+ -..|.+.||..+.+.+.+.+ .+++ +.+|.....
T Consensus 357 ia~~V~~RaA~l~A~~iaai~~~~~~~--------~~~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~ 428 (457)
T 2yhx_A 357 XLFLIAAYAFRLVVCXIXAICQKKGYS--------SGHIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPA 428 (457)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHTCS--------SEEEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCC--------cEEEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEEC
Confidence 555555544444444444333323332 25677777773355554444 4666 346777778
Q ss_pred CCccHHHHHHHHHHhc
Q 009868 456 IETTALGAAFAAGLAI 471 (523)
Q Consensus 456 ~e~~alGaA~lA~~~~ 471 (523)
.+++.+|||++|+++.
T Consensus 429 ~dgsg~GAAl~aa~~~ 444 (457)
T 2yhx_A 429 IDGXGAASXVIXSIAS 444 (457)
T ss_dssp CCTTTHHHHHHHHHHH
T ss_pred CCchhhhHHHHHHHHh
Confidence 8999999999999985
No 112
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=75.58 E-value=2.2 Score=36.86 Aligned_cols=25 Identities=20% Similarity=0.171 Sum_probs=22.2
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEE
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIG 32 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~ 32 (523)
.+||||.|+..+..++.|..|.+..
T Consensus 4 riLGiDpG~~riGvAv~d~~g~~a~ 28 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDEMGWTAQ 28 (150)
T ss_dssp EEEEEEECSSEEEEEEECTTSSSEE
T ss_pred EEEEEEccCCEEEEEEEECCCCEEe
Confidence 5899999999999999999887643
No 113
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=75.57 E-value=6.3 Score=37.46 Aligned_cols=46 Identities=17% Similarity=0.194 Sum_probs=30.3
Q ss_pred ccEEEEecCccccHHHHHHHHhhcC-------CceeecC-CCCccHHHHHHHHH
Q 009868 423 EFLLRVDGGATVNNLLMQIQADLLG-------SPVIRPA-DIETTALGAAFAAG 468 (523)
Q Consensus 423 ~~~i~~~GG~a~s~~~~qi~Advlg-------~pv~~~~-~~e~~alGaA~lA~ 468 (523)
++.|++.||.+.++.+.+.+...+. .++..+. ..+++++|||.++.
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 6789999998865656555444332 3455555 35678899998863
No 114
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=75.54 E-value=4.7 Score=36.90 Aligned_cols=62 Identities=19% Similarity=0.251 Sum_probs=42.4
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEc
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLT 87 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis 87 (523)
.+|+||-.|..+-++|++ +|+++...... . .+-.+. +...+++++++ .++.+.+ |.+|+++
T Consensus 3 ~iLaIdTS~~~~svAl~~-~~~~~~~~~~~-~---------~~Hs~~----L~p~i~~~L~~---a~~~~~d-ld~Iav~ 63 (213)
T 3r6m_A 3 KILAIDTATENCSVALLV-NDQVISRSEVA-P---------RDHTKK----VLPMVDEVLKE---AGLTLQD-LDALAFG 63 (213)
T ss_dssp CEEEEECSSSEEEEEEES-SSCEEEEEEEC-C---------SCCHHH----HHHHHHHHHHT---TTCCTTT-CSEEEEE
T ss_pred EEEEEEccCcceEEEEEE-CCEEEEEEEec-h---------HHHHHH----HHHHHHHHHHH---cCCCHHH-ccEEEEe
Confidence 589999988889999997 47777653211 1 112333 34456667666 6788889 9999887
Q ss_pred c
Q 009868 88 N 88 (523)
Q Consensus 88 ~ 88 (523)
.
T Consensus 64 ~ 64 (213)
T 3r6m_A 64 R 64 (213)
T ss_dssp E
T ss_pred c
Confidence 6
No 115
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=75.17 E-value=6.4 Score=39.11 Aligned_cols=82 Identities=18% Similarity=0.198 Sum_probs=51.0
Q ss_pred cCCceEEEEecCCC--CceEEEEcCCCC---EEEEEEeeeeeccC-------CCCeEEe-CHHH----HHHHHHHHHHHH
Q 009868 4 AKEVFIGAIDQGTT--STRFIIYDHQAR---PIGSHQVEFTQFYP-------EAGWVEH-EPME----ILESVRVCMAKA 66 (523)
Q Consensus 4 ~~~~~~lgIDiGtt--~~K~~l~d~~g~---i~~~~~~~~~~~~~-------~~g~~e~-d~~~----~~~~~~~~l~~~ 66 (523)
|+..++||+=.||| ++-+++++.+|+ ++...+.||+.... .++..+. ...+ +=+...++++++
T Consensus 2 ~~~~~~iGlMSGTSlDGiD~alv~~~~~~~~~~~~~~~pyp~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a~av~~~ 81 (370)
T 3cqy_A 2 MNKAYYIGLMSGTSMDGVDAVLVDFAGEQPQLIGTHTETIPTHLLKGLQRLCLPGTDEINRLGRLDRSVGKLFALAVNNL 81 (370)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEECSSSSCEEEEEEEECCCHHHHHHHHGGGCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecccchhhHeEEEEEEeCCeEEEEeeeeecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33457899999998 899999998764 66777777764211 1111110 1111 223333555566
Q ss_pred HHHHhhCCCCcccCceEEEEccc
Q 009868 67 LDKATADGHNVDSGLKAIGLTNQ 89 (523)
Q Consensus 67 ~~~~~~~~~~~~~~I~aIgis~~ 89 (523)
+++ +++++++ |.+||..+|
T Consensus 82 l~~---~~~~~~~-i~~IGsHGQ 100 (370)
T 3cqy_A 82 LAK---TKIAKDE-IIAIGSHGQ 100 (370)
T ss_dssp HHH---HCCCGGG-EEEEEEEEE
T ss_pred HHH---cCCCccc-ccEEEeCCc
Confidence 655 6788889 999987665
No 116
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=74.97 E-value=1.2 Score=45.05 Aligned_cols=24 Identities=13% Similarity=0.131 Sum_probs=18.9
Q ss_pred CCceEEEEecCCCCceEEEEcCCCC
Q 009868 5 KEVFIGAIDQGTTSTRFIIYDHQAR 29 (523)
Q Consensus 5 ~~~~~lgIDiGtt~~K~~l~d~~g~ 29 (523)
|.+.++|||+|||+++++++ .+|+
T Consensus 11 m~~~vvGIDlGTt~s~va~~-~~g~ 34 (409)
T 4gni_A 11 GERVVIGITFGNSNSSIAHT-VDDK 34 (409)
T ss_dssp --CCEEEEEECSSEEEEEEE-ETTE
T ss_pred CCCcEEEEEcCCCeEEEEEE-eCCc
Confidence 45679999999999999998 4554
No 117
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=74.05 E-value=8 Score=37.53 Aligned_cols=73 Identities=15% Similarity=0.103 Sum_probs=42.6
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCcccc-HHHHHHHHhhc-----------CCceeecC-C
Q 009868 389 ARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVN-NLLMQIQADLL-----------GSPVIRPA-D 455 (523)
Q Consensus 389 ~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s-~~~~qi~Advl-----------g~pv~~~~-~ 455 (523)
++.+++-.+..+...+..+... .. ++.|++.||.+++ +.+.+.+-+.+ ..+|.... .
T Consensus 229 a~~~~~~~~~~La~~i~~l~~~--l~--------p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~ 298 (321)
T 3vgl_A 229 AVDSFRELARWAGAGLADLASL--FD--------PSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLG 298 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HC--------CSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--hC--------CCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCC
Confidence 3344555555555555444332 34 6889999999875 44433332221 12455555 4
Q ss_pred CCccHHHHHHHHHHhc
Q 009868 456 IETTALGAAFAAGLAI 471 (523)
Q Consensus 456 ~e~~alGaA~lA~~~~ 471 (523)
.+++++|||.++..++
T Consensus 299 ~~a~l~GAa~l~~~~~ 314 (321)
T 3vgl_A 299 GKAGLVGAADLARQGL 314 (321)
T ss_dssp GGHHHHHHHHHHHTC-
T ss_pred CcHHHHHHHHHHHhhh
Confidence 6688899999887765
No 118
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=73.48 E-value=9.2 Score=36.94 Aligned_cols=72 Identities=17% Similarity=0.217 Sum_probs=42.1
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccc-cHHHHHHHHhhc----------CCceeecC-C
Q 009868 388 IARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATV-NNLLMQIQADLL----------GSPVIRPA-D 455 (523)
Q Consensus 388 l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~-s~~~~qi~Advl----------g~pv~~~~-~ 455 (523)
.++.+++-.+..+...+..+... .. ++.|++.||.++ ++.+.+.+...+ ..+|..+. .
T Consensus 238 ~a~~i~~~~~~~L~~~i~~l~~~--l~--------p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~ 307 (326)
T 2qm1_A 238 FALMVVDRVCFYLGLATGNLGNT--LN--------PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELG 307 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--HC--------CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--cC--------CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcC
Confidence 34445555555555555544332 24 678999999986 455544433322 24566554 3
Q ss_pred CCccHHHHHHHHHH
Q 009868 456 IETTALGAAFAAGL 469 (523)
Q Consensus 456 ~e~~alGaA~lA~~ 469 (523)
.+++++|||.++..
T Consensus 308 ~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 308 NEAGVIGAASLALQ 321 (326)
T ss_dssp GGHHHHHHHHHGGG
T ss_pred chHHHHHHHHHHHH
Confidence 45788999987643
No 119
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=73.21 E-value=1.4 Score=44.10 Aligned_cols=22 Identities=23% Similarity=0.249 Sum_probs=18.6
Q ss_pred ceEEEEecCCCCceEEEEcCCCC
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQAR 29 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~ 29 (523)
..++|||+|||++++++++ +|+
T Consensus 18 ~~viGID~GTt~s~va~~~-~g~ 39 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMK-NGK 39 (394)
T ss_dssp CSCEEEEECSSEEEEEEEC-SSC
T ss_pred CCEEEEEeCcCcEEEEEEE-CCe
Confidence 4679999999999999986 454
No 120
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=71.42 E-value=14 Score=32.01 Aligned_cols=53 Identities=17% Similarity=0.234 Sum_probs=34.4
Q ss_pred eEEEEecCCCCceEEEEcCCCCEE---EEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHH
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPI---GSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDK 69 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~---~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~ 69 (523)
.+||||-|++++=.++++.+|+.+ ....+.++ . .+..+=+..+.+.+.+++++
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~~~~~v~~G~i~t~------~---~~~~~Rl~~i~~~l~~~i~~ 57 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTK------V---DDLPSRLKLIYAGVTEIITQ 57 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECC------C---SCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCCCeeEEEEEecCCeEEEEEeeEEECC------C---CCHHHHHHHHHHHHHHHHHH
Confidence 489999999999999999777633 33333322 1 23333345666677777766
No 121
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=70.03 E-value=5.5 Score=41.72 Aligned_cols=75 Identities=15% Similarity=0.160 Sum_probs=46.6
Q ss_pred eeEEcCCCCCCHHHHHHHHHhhhhhH--HHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCC-ce
Q 009868 374 GVCIGITRFTSKAHIARAVLESMCFQ--VKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGS-PV 450 (523)
Q Consensus 374 g~~~gl~~~~~~~~l~rAv~Egia~~--~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~-pv 450 (523)
..+..+...++-++ ++-+-+-+-.. .+..++.+ |........-++..|+++||+|+-+-+.++..++|++ +|
T Consensus 505 ~~L~~I~~R~~vEE-lelVR~~ak~~vfv~n~Lral----g~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~V 579 (607)
T 1nbw_A 505 GELVPIDNASPLEK-IRLVRRQAKEKVFVTNCLRAL----RQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGV 579 (607)
T ss_dssp TEEEEECCSSCHHH-HHHHHHHHHHHHHHHHHHHHH----SSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTC
T ss_pred cceeeeCCCcchHH-HHHHHHHHhhhhhhHHHHHhc----CCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCe
Confidence 66667755655666 65554442222 11224444 2211111112258899999999999999999999999 88
Q ss_pred eec
Q 009868 451 IRP 453 (523)
Q Consensus 451 ~~~ 453 (523)
.+-
T Consensus 580 RiG 582 (607)
T 1nbw_A 580 VAG 582 (607)
T ss_dssp EEE
T ss_pred EEe
Confidence 763
No 122
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=70.02 E-value=17 Score=36.30 Aligned_cols=48 Identities=4% Similarity=-0.013 Sum_probs=34.7
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccc-cHHHHHHHHhh
Q 009868 389 ARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATV-NNLLMQIQADL 445 (523)
Q Consensus 389 ~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~-s~~~~qi~Adv 445 (523)
++-++|..+|.++..+-.+.-..| . ++.|+++||.+. ++.+++.+.+-
T Consensus 299 A~la~d~f~yriak~Iga~aa~LG-~--------vDaIVfTGGIgEns~~vr~~I~~~ 347 (398)
T 4ijn_A 299 AKLAYDVYIHRLRKYIGAYMAVLG-R--------TDVISFTAGVGENVPPVRRDALAG 347 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHS-S--------CCEEEEEHHHHHHCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-C--------CcEEEECCccccccHHHHHHHHHH
Confidence 556788888888887777654333 3 799999999994 56576665544
No 123
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=69.99 E-value=18 Score=35.30 Aligned_cols=69 Identities=14% Similarity=0.093 Sum_probs=39.9
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHH----Hhh-c----CCceeecCCCCccH
Q 009868 390 RAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQ----ADL-L----GSPVIRPADIETTA 460 (523)
Q Consensus 390 rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~----Adv-l----g~pv~~~~~~e~~a 460 (523)
+.+++-.+..+...+..+... .. ++.|++.||.+ +.+.+.+ ... + ..+|..+...++++
T Consensus 262 ~~il~~~~~~La~~i~~l~~~--l~--------P~~IvlgG~i~--~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~~~ 329 (343)
T 2yhw_A 262 QSILRTAGTALGLGVVNILHT--MN--------PSLVILSGVLA--SHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPAL 329 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TC--------CSEEEEESTTH--HHHHHHHHHHHHHHSCGGGTTCEEEECCCSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH--hC--------CCEEEEeCCcH--HHHHHHHHHHHHHhcccccCCcEEEEccCCCchH
Confidence 344444555555555444332 34 67888888886 3333332 222 1 35667666567788
Q ss_pred HHHHHHHHHh
Q 009868 461 LGAAFAAGLA 470 (523)
Q Consensus 461 lGaA~lA~~~ 470 (523)
+|||.++...
T Consensus 330 ~GAa~l~~~~ 339 (343)
T 2yhw_A 330 LGAASMVLDY 339 (343)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987653
No 124
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=69.04 E-value=11 Score=37.72 Aligned_cols=71 Identities=18% Similarity=0.221 Sum_probs=41.4
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccccHH-HHHHHHhhcCC--ceee--cCCC-CccHHH
Q 009868 389 ARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNL-LMQIQADLLGS--PVIR--PADI-ETTALG 462 (523)
Q Consensus 389 ~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~-~~qi~Advlg~--pv~~--~~~~-e~~alG 462 (523)
++.+++-.+..+...+-.+....+.. ++.|+++||.+++.. +.+.+...+.. |+.+ .... ++.++|
T Consensus 270 a~~~l~~~~~~la~~i~~l~~~l~~~--------p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~G 341 (381)
T 1saz_A 270 AKRVYRAMAYQIAKWIGKMAAVLKGE--------VDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALS 341 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTC--------CSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC--------CCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHH
Confidence 44456666666666665554332114 789999999987543 44544444432 4433 3332 378889
Q ss_pred HHHHH
Q 009868 463 AAFAA 467 (523)
Q Consensus 463 aA~lA 467 (523)
||.++
T Consensus 342 Aa~l~ 346 (381)
T 1saz_A 342 ALRVL 346 (381)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98865
No 125
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=68.33 E-value=3.2 Score=41.45 Aligned_cols=47 Identities=17% Similarity=0.152 Sum_probs=36.6
Q ss_pred ccEEEEecCccccHHHHHHHHhhcC--------Cceeec-CCCCccHHHHHHHHHH
Q 009868 423 EFLLRVDGGATVNNLLMQIQADLLG--------SPVIRP-ADIETTALGAAFAAGL 469 (523)
Q Consensus 423 ~~~i~~~GG~a~s~~~~qi~Advlg--------~pv~~~-~~~e~~alGaA~lA~~ 469 (523)
.+.|+++||.|+-+-+.+.+.+-++ .+|..+ +...++++|++++|..
T Consensus 294 ~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 294 YANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 349 (375)
T ss_dssp HTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHC
T ss_pred HhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhCc
Confidence 4779999999999999888888776 334333 3456889999999973
No 126
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=68.30 E-value=16 Score=35.55 Aligned_cols=48 Identities=17% Similarity=0.142 Sum_probs=30.6
Q ss_pred ccE-EEEecCcccc--HH-----HHHHHHh--h-----cCCceeecCCCCccHHHHHHHHHHh
Q 009868 423 EFL-LRVDGGATVN--NL-----LMQIQAD--L-----LGSPVIRPADIETTALGAAFAAGLA 470 (523)
Q Consensus 423 ~~~-i~~~GG~a~s--~~-----~~qi~Ad--v-----lg~pv~~~~~~e~~alGaA~lA~~~ 470 (523)
++. |++.||.+.. ++ +.+.+.+ . -..||......+++.+|||.++...
T Consensus 265 P~~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~a~l~GAa~l~~~~ 327 (332)
T 1sz2_A 265 TFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQT 327 (332)
T ss_dssp CTTEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSCHHHHHHHHHHHHH
T ss_pred CCeEEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEECCchhHHHHHHHHHHh
Confidence 565 9999999864 22 2233322 1 1456766556678899999987654
No 127
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=67.11 E-value=2.7 Score=44.56 Aligned_cols=24 Identities=21% Similarity=0.221 Sum_probs=19.3
Q ss_pred CCceEEEEecCCCCceEEEEcCCCC
Q 009868 5 KEVFIGAIDQGTTSTRFIIYDHQAR 29 (523)
Q Consensus 5 ~~~~~lgIDiGtt~~K~~l~d~~g~ 29 (523)
++..++|||+|||++.+++++ +|+
T Consensus 2 ~m~~~iGIDlGTt~s~va~~~-~g~ 25 (554)
T 1yuw_A 2 SKGPAVGIDLGTTYSCVGVFQ-HGK 25 (554)
T ss_dssp CSCCCEEEEECSSEEEEEEEC-SSS
T ss_pred CCCCEEEEEeCcccEEEEEEE-CCE
Confidence 344689999999999999986 454
No 128
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=66.77 E-value=11 Score=39.07 Aligned_cols=47 Identities=21% Similarity=0.217 Sum_probs=33.4
Q ss_pred EEEEecCccc-cHHHHH----HHHhhc--------CCceeecCCCCccHHHHHHHHHHhc
Q 009868 425 LLRVDGGATV-NNLLMQ----IQADLL--------GSPVIRPADIETTALGAAFAAGLAI 471 (523)
Q Consensus 425 ~i~~~GG~a~-s~~~~q----i~Advl--------g~pv~~~~~~e~~alGaA~lA~~~~ 471 (523)
.|-+.|+.-+ .|.+.+ .+.+++ +.+|......+++.+|||++|+++.
T Consensus 412 ~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~~~~~~~~v~l~~a~DGSg~GAAliAa~a~ 471 (485)
T 3o8m_A 412 HIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLTQ 471 (485)
T ss_dssp EEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEECCCTTTHHHHHHHHHHH
T ss_pred EEEEecChhccCccHHHHHHHHHHHHhccccccCCCceEEEEEcCCChHHHHHHHHHHHH
Confidence 3556777763 455544 444445 3668877788999999999999986
No 129
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=66.54 E-value=12 Score=36.91 Aligned_cols=20 Identities=40% Similarity=0.640 Sum_probs=17.9
Q ss_pred ceEEEEecCCCCceEEEEcC
Q 009868 7 VFIGAIDQGTTSTRFIIYDH 26 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~ 26 (523)
.+++.||+|++++|..|++.
T Consensus 3 ~~~avID~GSns~Rl~I~~~ 22 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSY 22 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEE
T ss_pred CEEEEEEcCCCCeEEEEEEE
Confidence 46889999999999999984
No 130
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=66.41 E-value=2.4 Score=41.57 Aligned_cols=24 Identities=21% Similarity=0.357 Sum_probs=18.6
Q ss_pred CcccCCceEEEEecCCCCceEEEE
Q 009868 1 MAKAKEVFIGAIDQGTTSTRFIIY 24 (523)
Q Consensus 1 m~~~~~~~~lgIDiGtt~~K~~l~ 24 (523)
|+||++.+++|||+|-.++|++-.
T Consensus 1 ~~~~~~~~iigiD~G~~~~K~~~~ 24 (329)
T 4apw_A 1 MENITNEYVMTLDAGKYETKLIGK 24 (329)
T ss_dssp ----CCEEEEEEEECSSEEEEEEH
T ss_pred CCCccCceEEEEecCCceEEEEec
Confidence 889999999999999999999963
No 131
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=65.87 E-value=6.8 Score=44.36 Aligned_cols=30 Identities=10% Similarity=0.072 Sum_probs=25.9
Q ss_pred ceEEEEecCC-----CCceEEEEcCCCCEEEEEEe
Q 009868 7 VFIGAIDQGT-----TSTRFIIYDHQARPIGSHQV 36 (523)
Q Consensus 7 ~~~lgIDiGt-----t~~K~~l~d~~g~i~~~~~~ 36 (523)
+.++|||-|- |++|++++|.+|+++.....
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~~G~~l~~~~i 553 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKI 553 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECTTSCEEEEEEE
T ss_pred CeEEEecCCCCCCCCCCeEEEEECCCCCEEEEEEE
Confidence 4799999984 48999999999999987666
No 132
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=65.80 E-value=21 Score=32.82 Aligned_cols=62 Identities=13% Similarity=0.210 Sum_probs=41.1
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEc
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLT 87 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis 87 (523)
.+|+||--+..+-++|++ +|+++.... ... ..-.+. +...+++++++ .++.+.+ |.+|+++
T Consensus 2 ~iL~idTs~~~~sval~~-~~~~~~~~~-~~~---------~~h~~~----l~~~i~~~L~~---a~~~~~d-id~Iav~ 62 (231)
T 2gel_A 2 RILAIDTATEACSVALWN-NGTINAHFE-LCP---------REHTQR----ILPMVQEILAA---SGASLNE-IDALAFG 62 (231)
T ss_dssp EEEEEECSSSEEEEEEEE-TTEEEEEEE-ECC---------SCCHHH----HHHHHHHHHHH---TTCCGGG-CSEEEEE
T ss_pred eEEEEECCCcCeEEEEEE-CCEEEEEEh-hhh---------HHHHHH----HHHHHHHHHHH---cCCCHHH-CCEEEEE
Confidence 589999888888899997 566664211 111 112233 44556666666 6788889 9999986
Q ss_pred c
Q 009868 88 N 88 (523)
Q Consensus 88 ~ 88 (523)
.
T Consensus 63 ~ 63 (231)
T 2gel_A 63 R 63 (231)
T ss_dssp C
T ss_pred c
Confidence 6
No 133
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=65.77 E-value=25 Score=33.78 Aligned_cols=48 Identities=21% Similarity=0.125 Sum_probs=30.6
Q ss_pred ccEEEEecCccccH-----HHHHHHHhhcC-------CceeecC-CCCccHHHHHHHHHHh
Q 009868 423 EFLLRVDGGATVNN-----LLMQIQADLLG-------SPVIRPA-DIETTALGAAFAAGLA 470 (523)
Q Consensus 423 ~~~i~~~GG~a~s~-----~~~qi~Advlg-------~pv~~~~-~~e~~alGaA~lA~~~ 470 (523)
++.|++.||.++.. .+.+.+...+. .+|.... ..+++++|||.++...
T Consensus 240 P~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~~ 300 (310)
T 3htv_A 240 PDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQR 300 (310)
T ss_dssp CSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHHH
Confidence 68899999988652 33444433332 2344444 4578899999988654
No 134
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=65.68 E-value=7.3 Score=40.69 Aligned_cols=77 Identities=13% Similarity=0.169 Sum_probs=44.8
Q ss_pred ceEEEEecCCCCceEEEEcCCC---CEEEEEEeeeeeccCCCCeE---EeCHHHHHHHHHHHHHHHHHHHhhCCCCcccC
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQA---RPIGSHQVEFTQFYPEAGWV---EHEPMEILESVRVCMAKALDKATADGHNVDSG 80 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g---~i~~~~~~~~~~~~~~~g~~---e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 80 (523)
+.+.+|||||.|+|..+++..+ +++...+.... . ..|-. ..+++ -.+..++++++..+.++..++ ++
T Consensus 15 ~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vr--L-g~gl~~~g~Ls~e-ai~r~~~~L~~F~~~~~~~~v--~~- 87 (508)
T 3hi0_A 15 APVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCG--L-GKGLALTGRMHEE-GVTRALMALRRFHVLSEQAQA--QK- 87 (508)
T ss_dssp CCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECC--T-TTTHHHHSSCCHH-HHHHHHHHHHHHHHHHHHTTC--SE-
T ss_pred CeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEee--c-ccCccccCCcCHH-HHHHHHHHHHHHHHHHHhCCC--Ce-
Confidence 4578899999999999999643 34443333222 2 12211 12333 345566677666555443443 56
Q ss_pred ceEEEEcccc
Q 009868 81 LKAIGLTNQR 90 (523)
Q Consensus 81 I~aIgis~~~ 90 (523)
|.+++.++.+
T Consensus 88 v~~vATsA~R 97 (508)
T 3hi0_A 88 LYVLATAAAR 97 (508)
T ss_dssp EEEEECTHHH
T ss_pred EEEEeeHHHH
Confidence 8888777744
No 135
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=65.29 E-value=25 Score=34.86 Aligned_cols=73 Identities=10% Similarity=-0.101 Sum_probs=42.6
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCcccc-HHHHHHHHhhc--------CCceeecC-CCC
Q 009868 388 IARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVN-NLLMQIQADLL--------GSPVIRPA-DIE 457 (523)
Q Consensus 388 l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s-~~~~qi~Advl--------g~pv~~~~-~~e 457 (523)
.++.+++-.+..+...+..+... .. ++.|++.||.++. +.+.+.+...+ ..+|.... ..+
T Consensus 290 ~a~~~l~~~~~~La~~i~~l~~~--ld--------P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~ 359 (380)
T 2hoe_A 290 RVKEYFDDIARYFSIGLLNLIHL--FG--------ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEP 359 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--HC--------CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--hC--------CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCc
Confidence 34455555555555555444332 24 6789999999864 54444333322 23555554 456
Q ss_pred ccHHHHHHHHHHh
Q 009868 458 TTALGAAFAAGLA 470 (523)
Q Consensus 458 ~~alGaA~lA~~~ 470 (523)
++++|||.++...
T Consensus 360 a~~~GAa~l~~~~ 372 (380)
T 2hoe_A 360 VIAFGAAVHALEN 372 (380)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7899999987643
No 136
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=65.05 E-value=16 Score=33.42 Aligned_cols=63 Identities=13% Similarity=0.042 Sum_probs=41.5
Q ss_pred ceEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEE
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGL 86 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgi 86 (523)
.++|+||-.|..+-++|++ +++++ +...... .+-.+ .+...+++++++ .++.+.+ |.+|++
T Consensus 12 ~~iLaidTS~~~~sval~~-~~~~l-~~~~~~~---------r~Hse----~L~p~i~~~L~~---a~~~~~d-ld~Iav 72 (218)
T 2a6a_A 12 HMNVLALDTSQRIRIGLRK-GEDLF-EISYTGE---------KKHAE----ILPVVVKKLLDE---LDLKVKD-LDVVGV 72 (218)
T ss_dssp -CEEEEEECSSSEEEEEEE-TTEEE-EEEEESC---------GGGGG----HHHHHHHHHHHH---HTCCGGG-CSEEEE
T ss_pred ceEEEEEcCCcCeEEEEEE-CCEEE-EEEecch---------HHHHH----HHHHHHHHHHHH---cCCCHHH-CCEEEE
Confidence 3689999999999999998 56666 3222111 11123 344555566665 4778889 999988
Q ss_pred cc
Q 009868 87 TN 88 (523)
Q Consensus 87 s~ 88 (523)
+.
T Consensus 73 ~~ 74 (218)
T 2a6a_A 73 GI 74 (218)
T ss_dssp EC
T ss_pred Ec
Confidence 76
No 137
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=64.25 E-value=12 Score=38.47 Aligned_cols=75 Identities=12% Similarity=0.078 Sum_probs=44.3
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCcc--EEEEecCccc-cHHHHHHHH----hhc--CCceeecCCCC
Q 009868 387 HIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEF--LLRVDGGATV-NNLLMQIQA----DLL--GSPVIRPADIE 457 (523)
Q Consensus 387 ~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~--~i~~~GG~a~-s~~~~qi~A----dvl--g~pv~~~~~~e 457 (523)
.+.+++++=.|..+...+-.+-...+ ++ .|.+.||..+ .+.+.+.+. +.+ ..+|...-..+
T Consensus 365 ~va~~V~~RaA~lla~~ia~i~~~~~----------~~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~~d 434 (451)
T 1bdg_A 365 YACEMVVKRAAYLAGAGIACILRRIN----------RSEVTVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLSED 434 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC----------CSEEEEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC----------CCceEEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 36666666666655555554433223 34 4556677653 444543333 343 45666666778
Q ss_pred ccHHHHHHHHHHhc
Q 009868 458 TTALGAAFAAGLAI 471 (523)
Q Consensus 458 ~~alGaA~lA~~~~ 471 (523)
++.+|||++|+.+.
T Consensus 435 gs~iGAAllA~~~~ 448 (451)
T 1bdg_A 435 GSGKGAAAIAASCT 448 (451)
T ss_dssp HHHHHHHHHHTTC-
T ss_pred ccHHHHHHHHHHHh
Confidence 89999999998753
No 138
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=61.91 E-value=2.6 Score=42.06 Aligned_cols=21 Identities=38% Similarity=0.363 Sum_probs=17.7
Q ss_pred eEEEEecCCCCceEEEEcCCCC
Q 009868 8 FIGAIDQGTTSTRFIIYDHQAR 29 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~ 29 (523)
.++|||+|||++++++++ +|+
T Consensus 3 ~~vGIDlGTt~s~va~~~-~g~ 23 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMD-GTT 23 (383)
T ss_dssp CCCEEECCSSEEEEEEEE-TTE
T ss_pred cEEEEEcCCCCEEEEEEE-CCe
Confidence 478999999999999986 453
No 139
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=61.67 E-value=8.7 Score=38.15 Aligned_cols=77 Identities=16% Similarity=0.153 Sum_probs=48.0
Q ss_pred ceEEEEecCCC--CceEEEEcCCC--CEEEEEEeeeeecc-------CCCCeEEeCHHHH-------HHHHHHHHHHHHH
Q 009868 7 VFIGAIDQGTT--STRFIIYDHQA--RPIGSHQVEFTQFY-------PEAGWVEHEPMEI-------LESVRVCMAKALD 68 (523)
Q Consensus 7 ~~~lgIDiGtt--~~K~~l~d~~g--~i~~~~~~~~~~~~-------~~~g~~e~d~~~~-------~~~~~~~l~~~~~ 68 (523)
+++||+=.||| ++-+++++.+| +++...+.||+... -.++ ..+++++ =+...++++++++
T Consensus 2 ~~~IGlMSGTSlDGID~alv~~~~~~~l~~~~~~py~~~lr~~l~~~~~~~--~~~~~~~~~l~~~lg~~~a~av~~~l~ 79 (371)
T 3qbx_A 2 PRYLGLMSGTSLDGMDIVLIEQGDRTTLLASHYLPMPAGLREDILALCVPG--PDEIARAAEVEQRWVALAAQGVRELLL 79 (371)
T ss_dssp CEEEEEECCSSCSEEEEEEEEESSSEEEEEEEEEECCHHHHHHHHHTTSCC--BTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecccChhhhhEEEEEecCCceecceeeecCCHHHHHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999998 78888888766 56666677776321 0111 1122221 2233345555555
Q ss_pred HHhhCCCCcccCceEEEEccc
Q 009868 69 KATADGHNVDSGLKAIGLTNQ 89 (523)
Q Consensus 69 ~~~~~~~~~~~~I~aIgis~~ 89 (523)
+ .++++++ |.+||.-+|
T Consensus 80 ~---~~~~~~~-Id~IGsHGQ 96 (371)
T 3qbx_A 80 Q---QQMSPDE-VRAIGSHGQ 96 (371)
T ss_dssp H---TTCCGGG-CCEEEECCE
T ss_pred H---cCCCccc-ccEEEeCCc
Confidence 5 7888889 999877665
No 140
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=60.44 E-value=14 Score=38.73 Aligned_cols=75 Identities=13% Similarity=0.162 Sum_probs=47.2
Q ss_pred eeEEcCCCCCCHHHHHHHHHhhhhhH--HHHHHHHHHhhhccccccccccCccEEEEecCccccHHHHHHHHhhcCC-ce
Q 009868 374 GVCIGITRFTSKAHIARAVLESMCFQ--VKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVNNLLMQIQADLLGS-PV 450 (523)
Q Consensus 374 g~~~gl~~~~~~~~l~rAv~Egia~~--~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~qi~Advlg~-pv 450 (523)
..+..+...++-++ ++-|-+-+-.. .+..++.+... ... ...-++..|+++||+|+-+-+.|+..++|++ +|
T Consensus 503 ~~L~~I~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~-~~~---g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~V 577 (610)
T 2d0o_A 503 DELVPLPGDLALEK-VRAIRRSAKERVFVTNALRALRQV-SPT---GNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRL 577 (610)
T ss_dssp SCEEECCTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHH-SSS---SCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSC
T ss_pred cceeeeCCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCc-cCC---CcccccCCEEEeCchhhcccHHHHHHHHhCcCCe
Confidence 66667755655666 65555443222 12224444321 111 0111258999999999999999999999999 88
Q ss_pred eec
Q 009868 451 IRP 453 (523)
Q Consensus 451 ~~~ 453 (523)
.+-
T Consensus 578 RiG 580 (610)
T 2d0o_A 578 VAG 580 (610)
T ss_dssp EEE
T ss_pred EEe
Confidence 763
No 141
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=59.05 E-value=4.1 Score=41.83 Aligned_cols=60 Identities=20% Similarity=0.248 Sum_probs=35.4
Q ss_pred CceEEEEecCCCCceEEEEcCCC------CEEEEEEeeeeeccCCCCe--EEeCHHHHHHHHHHHHHHHHH
Q 009868 6 EVFIGAIDQGTTSTRFIIYDHQA------RPIGSHQVEFTQFYPEAGW--VEHEPMEILESVRVCMAKALD 68 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~~g------~i~~~~~~~~~~~~~~~g~--~e~d~~~~~~~~~~~l~~~~~ 68 (523)
.+|.+.||+|+|++|+.|+.... .++.+ ... .....||- ...+|+...+.+..+++.+.+
T Consensus 33 ~~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~~--~~~-~k~~gpGlSs~~~~p~~~~~~l~~Ll~~a~~ 100 (452)
T 3zx3_A 33 VKYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQ--LEE-CQVKGPGISKYAQKTDEIAAYLAECMKMSTE 100 (452)
T ss_dssp EEEEEEEEECSSCEEEEEEEEECCCTTCCCCCEE--EEE-EECSSSCGGGGTTCGGGHHHHHHHHHHHHHH
T ss_pred ceEEEEEEcCCCCcEEEEEEEeCCcCCCccccce--eee-ecccCCChhccCCCHHHHHHHHHHHHHHHHH
Confidence 45888999999999999998421 12221 111 11112441 123788877777766666543
No 142
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=58.69 E-value=21 Score=41.19 Aligned_cols=30 Identities=10% Similarity=0.072 Sum_probs=25.9
Q ss_pred ceEEEEecCC-----CCceEEEEcCCCCEEEEEEe
Q 009868 7 VFIGAIDQGT-----TSTRFIIYDHQARPIGSHQV 36 (523)
Q Consensus 7 ~~~lgIDiGt-----t~~K~~l~d~~g~i~~~~~~ 36 (523)
+.++|||-|- |++|++++|.+|+++....+
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~~G~vl~~~~i 550 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKI 550 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECTTSCEEEEEEE
T ss_pred CeEEEecCCCCCCCCCceEEEEECCCCCEEEEEEE
Confidence 4789999984 48999999999999987666
No 143
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=57.98 E-value=9.3 Score=38.37 Aligned_cols=48 Identities=10% Similarity=0.070 Sum_probs=37.1
Q ss_pred HHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCcc-ccHHHHHHHHhhcC
Q 009868 391 AVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGAT-VNNLLMQIQADLLG 447 (523)
Q Consensus 391 Av~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a-~s~~~~qi~Advlg 447 (523)
-++|-.+|.++..+-.+....| . ++.|+++||.. +|+.+++.+.+-++
T Consensus 300 lA~d~f~yri~k~IGa~~a~Lg-g--------vDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 300 LVLEIYDYRIAKYIGAYAAAMN-G--------VDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-C--------CSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-C--------CCEEEECcccccCCHHHHHHHHhhhh
Confidence 3677888888887777654444 4 89999999999 88888887777654
No 144
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=57.43 E-value=4.2 Score=40.87 Aligned_cols=22 Identities=23% Similarity=0.277 Sum_probs=18.4
Q ss_pred ceEEEEecCCCCceEEEEcCCCC
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQAR 29 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~ 29 (523)
+.++|||+|||++++++++ +|+
T Consensus 23 ~~viGID~GTt~s~va~~~-~g~ 44 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQ-HGK 44 (404)
T ss_dssp CCCEEEEECSSEEEEEEEE-TTE
T ss_pred CCEEEEEcCCccEEEEEEE-CCe
Confidence 4589999999999999886 453
No 145
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=57.41 E-value=18 Score=34.36 Aligned_cols=72 Identities=6% Similarity=-0.072 Sum_probs=44.4
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCcccc--HHHHHHHHhhcCCceeecCCCCccHHHHH
Q 009868 387 HIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATVN--NLLMQIQADLLGSPVIRPADIETTALGAA 464 (523)
Q Consensus 387 ~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s--~~~~qi~Advlg~pv~~~~~~e~~alGaA 464 (523)
..++.+++-.+..+...+ .+. .-.+ ++.|++.||.+++ +.+.+.+.... .++..+ .++...||+
T Consensus 210 ~~A~~i~~~~~~~La~~i-~~~--~~~~--------p~~vvlgGGv~~~~~~~l~~~l~~~~-~~i~~~--~~a~~~GA~ 275 (291)
T 1zbs_A 210 PAVYSLVQNSFDDFLVRN-VLR--YNRP--------DLPLHFIGSVAFHYREVLSSVIKKRG-LTLGSV--LQSPMEGLI 275 (291)
T ss_dssp HHHHHHHHHHHHHHHHHH-TGG--GCCT--------TSCEEEESHHHHHTHHHHHHHHHHTT-CCEEEE--ESCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hcc--cCCC--------CceEEEECchHHhhHHHHHHHHHHcC-Ceeccc--CcCHHHHHH
Confidence 566667776666666665 321 1114 6789999999887 44444444322 234443 378899999
Q ss_pred HHHHHhcc
Q 009868 465 FAAGLAIG 472 (523)
Q Consensus 465 ~lA~~~~G 472 (523)
.+|....+
T Consensus 276 ~la~~~~~ 283 (291)
T 1zbs_A 276 QYHHNNHV 283 (291)
T ss_dssp HHHHHCCC
T ss_pred HHHHhhhh
Confidence 99876543
No 146
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=56.77 E-value=18 Score=34.99 Aligned_cols=45 Identities=27% Similarity=0.286 Sum_probs=27.3
Q ss_pred ccEEEEecCcccc-HHHHHHHHhh----c----CCceeecC-CCCccHHHHHHHH
Q 009868 423 EFLLRVDGGATVN-NLLMQIQADL----L----GSPVIRPA-DIETTALGAAFAA 467 (523)
Q Consensus 423 ~~~i~~~GG~a~s-~~~~qi~Adv----l----g~pv~~~~-~~e~~alGaA~lA 467 (523)
++.|++.||.++. +++.++...+ + ..+|..+. ..+++++|||.+|
T Consensus 270 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 270 PDLLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp CSEEEEESGGGGSTHHHHSSGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred CCEEEEeChhhcchhHHHHHHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 5788999998864 4444422221 1 23455544 4567889999865
No 147
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=56.26 E-value=6.5 Score=38.15 Aligned_cols=23 Identities=17% Similarity=0.234 Sum_probs=19.8
Q ss_pred EEEEecCCCCceEEEEcCCCCEE
Q 009868 9 IGAIDQGTTSTRFIIYDHQARPI 31 (523)
Q Consensus 9 ~lgIDiGtt~~K~~l~d~~g~i~ 31 (523)
.+|||+|++++|++..+.+|++.
T Consensus 2 ~igiD~G~sntK~~~~~~~g~~~ 24 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGTIK 24 (320)
T ss_dssp EEEEEECSSEEEEEEECSSSCEE
T ss_pred eEEEecCCccceEEEecCCCEEE
Confidence 68999999999999877788753
No 148
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=55.87 E-value=33 Score=34.25 Aligned_cols=68 Identities=15% Similarity=0.169 Sum_probs=38.7
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccc-cHHHHHHHHhhc----------CCceeecC-CCC
Q 009868 390 RAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATV-NNLLMQIQADLL----------GSPVIRPA-DIE 457 (523)
Q Consensus 390 rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~-s~~~~qi~Advl----------g~pv~~~~-~~e 457 (523)
+.+++-.+..+...+..+... .. ++.|++.||.++ .+.+.+.+...+ ..+|.... ..+
T Consensus 312 ~~~l~~~~~~L~~~i~~l~~~--ld--------P~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~ 381 (406)
T 1z6r_A 312 KDIITGVGAHVGRILAIMVNL--FN--------PQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQ 381 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--HC--------CSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHh--cC--------CCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCCh
Confidence 334444444444444444322 24 678999999886 355544333221 34566655 456
Q ss_pred ccHHHHHHHH
Q 009868 458 TTALGAAFAA 467 (523)
Q Consensus 458 ~~alGaA~lA 467 (523)
++++|||++.
T Consensus 382 a~~~GAa~~~ 391 (406)
T 1z6r_A 382 GTMAGAALVK 391 (406)
T ss_dssp TTTTHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8899997754
No 149
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=55.56 E-value=2.9 Score=38.82 Aligned_cols=22 Identities=23% Similarity=0.348 Sum_probs=11.0
Q ss_pred EEEecCCCCc--------eEEEEcCCCCEE
Q 009868 10 GAIDQGTTST--------RFIIYDHQARPI 31 (523)
Q Consensus 10 lgIDiGtt~~--------K~~l~d~~g~i~ 31 (523)
=|+|+||.|+ |+++||.+|.++
T Consensus 9 ~~~~~~~~~~~~~~~~MIKaViFDlDGTLv 38 (250)
T 4gib_A 9 SGVDLGTENLYFQSNAMIEAFIFDLDGVIT 38 (250)
T ss_dssp ---------------CCCCEEEECTBTTTB
T ss_pred ccccCCCCCcccCccchhheeeecCCCccc
Confidence 3899999997 899999999876
No 150
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=54.85 E-value=13 Score=37.50 Aligned_cols=48 Identities=13% Similarity=0.156 Sum_probs=36.3
Q ss_pred HHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCcc-ccHHHHHHHHhhcC
Q 009868 391 AVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGAT-VNNLLMQIQADLLG 447 (523)
Q Consensus 391 Av~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a-~s~~~~qi~Advlg 447 (523)
-++|-.+|.++..+-.+.-..| +++.|+++||.. +|+.+++.+.+-++
T Consensus 308 lA~d~f~yri~k~IGa~aa~Lg---------gvDaIVFTgGIGEns~~vR~~i~~~l~ 356 (415)
T 2e1z_A 308 LAIKTFVHRIARHIAGHAASLH---------RLDGIIFTGGIGENSVLIRQLVIEHLG 356 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCS---------SCCEEEEEHHHHHHCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHhC---------CCCEEEECccccccCHHHHHHHHhhHh
Confidence 3677788888887777654333 289999999999 88888887776653
No 151
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=54.49 E-value=15 Score=30.94 Aligned_cols=37 Identities=19% Similarity=0.284 Sum_probs=32.4
Q ss_pred EeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEccc
Q 009868 49 EHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLTNQ 89 (523)
Q Consensus 49 e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis~~ 89 (523)
+.+++++++++.+.+.+++++ +++++++ |..|-||.+
T Consensus 43 ~Nt~e~I~~At~ELl~eii~~---N~l~~eD-IvSv~FTvT 79 (148)
T 1xho_A 43 DNTADEIVAETQKLLKEMAEK---NGLEEDD-IISIIFTVT 79 (148)
T ss_dssp SSSHHHHHHHHHHHHHHHHHH---TTCCGGG-EEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHH---cCCCHHH-EEEEEEEeC
Confidence 356899999999999999988 8899999 999988874
No 152
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=54.38 E-value=5.8 Score=42.45 Aligned_cols=19 Identities=42% Similarity=0.354 Sum_probs=16.8
Q ss_pred ceEEEEecCCCCceEEEEc
Q 009868 7 VFIGAIDQGTTSTRFIIYD 25 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d 25 (523)
..++|||+|||++.+++++
T Consensus 2 ~~viGIDlGTT~S~Va~~~ 20 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp CCEEEEECCSSEEEEEEEE
T ss_pred CcEEEEEcCCCcEEEEEEE
Confidence 3589999999999999985
No 153
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=53.82 E-value=47 Score=33.41 Aligned_cols=47 Identities=11% Similarity=0.049 Sum_probs=29.8
Q ss_pred ccEEEEecCccc-cHHHHHHHHhh-----c-----CCceeecC-CCCccHHHHHHHHHHh
Q 009868 423 EFLLRVDGGATV-NNLLMQIQADL-----L-----GSPVIRPA-DIETTALGAAFAAGLA 470 (523)
Q Consensus 423 ~~~i~~~GG~a~-s~~~~qi~Adv-----l-----g~pv~~~~-~~e~~alGaA~lA~~~ 470 (523)
++.|++.||.++ .+.+.+.+... + ..+|..+. ..+ +++|||.++...
T Consensus 358 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~~~~ 416 (429)
T 1z05_A 358 PEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALIKQA 416 (429)
T ss_dssp CSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHHHHH
Confidence 678999999886 34443333221 1 34566655 345 899999988654
No 154
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=52.77 E-value=23 Score=35.27 Aligned_cols=48 Identities=4% Similarity=0.010 Sum_probs=35.5
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCccc-cHHHHHHHHhh
Q 009868 389 ARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGATV-NNLLMQIQADL 445 (523)
Q Consensus 389 ~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~-s~~~~qi~Adv 445 (523)
++-++|-.+|.++..+-.+.-..| . ++.|+++||... |+.+++.+.+-
T Consensus 290 A~lA~d~f~yri~k~Iga~aa~Lg-~--------vDaIVfTGGIgens~~vR~~i~~~ 338 (391)
T 3r9p_A 290 AQLAYSVFTHRLRKYIGAYLAVLG-H--------TDVISFTAGIGENDAAVRRDAVSG 338 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHS-S--------CCEEEEEHHHHHHCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-C--------CCEEEECcccccCCHHHHHHHHHH
Confidence 456788889999888777754444 4 899999999996 56677665544
No 155
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=52.01 E-value=30 Score=33.10 Aligned_cols=48 Identities=13% Similarity=0.234 Sum_probs=29.7
Q ss_pred ccEEEEecCccccHHHHH----HHHhhc----CC---------ceeecC-CCCccHHHHHHHHHHh
Q 009868 423 EFLLRVDGGATVNNLLMQ----IQADLL----GS---------PVIRPA-DIETTALGAAFAAGLA 470 (523)
Q Consensus 423 ~~~i~~~GG~a~s~~~~q----i~Advl----g~---------pv~~~~-~~e~~alGaA~lA~~~ 470 (523)
++.|++.||.++.+.+.+ .+...+ .. +|..+. ..++.++|||.++...
T Consensus 225 Pe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~~~ 290 (302)
T 3epq_A 225 PXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQA 290 (302)
T ss_dssp CSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHHHH
T ss_pred chhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHHHH
Confidence 688999999987543332 222222 12 244444 3567889999988654
No 156
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=51.62 E-value=36 Score=33.59 Aligned_cols=47 Identities=11% Similarity=0.063 Sum_probs=28.9
Q ss_pred ccEEEEecC-ccccHHHHH------HHHhh-c-----------CCceeecC-CCCccHHHHHHHHHH
Q 009868 423 EFLLRVDGG-ATVNNLLMQ------IQADL-L-----------GSPVIRPA-DIETTALGAAFAAGL 469 (523)
Q Consensus 423 ~~~i~~~GG-~a~s~~~~q------i~Adv-l-----------g~pv~~~~-~~e~~alGaA~lA~~ 469 (523)
++.|++.|| .++++.+.+ .+... + ..||.+.. ..+++++|||.++..
T Consensus 305 p~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~~~ 371 (373)
T 2q2r_A 305 PLTIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCGLD 371 (373)
T ss_dssp CSEEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CCEEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCchhHHHHHHHHHh
Confidence 567888777 566555544 22222 2 24565543 557889999998753
No 157
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=48.60 E-value=19 Score=29.76 Aligned_cols=37 Identities=14% Similarity=0.264 Sum_probs=32.1
Q ss_pred EeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEccc
Q 009868 49 EHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLTNQ 89 (523)
Q Consensus 49 e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis~~ 89 (523)
+.+++++++++.+.+.+++++ +++++++ |.+|-||.+
T Consensus 14 ~Nt~e~I~~at~eLl~~i~~~---N~l~~~d-IvSv~FT~T 50 (127)
T 1dbf_A 14 RDTEEEILQKTKQLLEKIIEE---NHTKPED-VVQMLLSAT 50 (127)
T ss_dssp SCCHHHHHHHHHHHHHHHHHH---HCCCGGG-EEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHH---cCCCHHH-EEEEEEEeC
Confidence 346899999999999999987 7889999 999988874
No 158
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=48.38 E-value=8.5 Score=40.13 Aligned_cols=19 Identities=32% Similarity=0.340 Sum_probs=16.7
Q ss_pred eEEEEecCCCCceEEEEcC
Q 009868 8 FIGAIDQGTTSTRFIIYDH 26 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~ 26 (523)
.++|||+|||++++++++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~ 21 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEG 21 (509)
T ss_dssp CEEEEEECSSEEEEEEEET
T ss_pred CEEEEEcCCceEEEEEEEC
Confidence 4789999999999999863
No 159
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=47.44 E-value=20 Score=35.39 Aligned_cols=45 Identities=16% Similarity=0.081 Sum_probs=31.5
Q ss_pred ccEEEEecCccccHH--HHHHHHhhcCCceeecCCCCccHHHHHHHHHHh
Q 009868 423 EFLLRVDGGATVNNL--LMQIQADLLGSPVIRPADIETTALGAAFAAGLA 470 (523)
Q Consensus 423 ~~~i~~~GG~a~s~~--~~qi~Advlg~pv~~~~~~e~~alGaA~lA~~~ 470 (523)
++.|+++||||.-.. +.+.+.+.+. .. .++..+.|+|...++..-
T Consensus 291 ~~~Ivl~GGGa~l~~~~l~~~i~~~~~--~~-~~p~~anA~G~~~~~~~~ 337 (355)
T 3js6_A 291 IDRIIVTGGGANIHFDSLSHYYSDVFE--KA-DDSQFSNVRGYEKLGELL 337 (355)
T ss_dssp CSEEEEESTTHHHHHHHHHHHSSSCEE--CC-SSGGGHHHHHHHHHHHHH
T ss_pred ccEEEEECcchhcchhhHHHHHHHHCC--CC-CCcHHHHHHHHHHHHHHH
Confidence 789999999996332 4457777763 33 445668899998887654
No 160
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=47.29 E-value=7.6 Score=37.97 Aligned_cols=20 Identities=25% Similarity=0.162 Sum_probs=16.2
Q ss_pred eEEEEecCCCCceEEEEcCCC
Q 009868 8 FIGAIDQGTTSTRFIIYDHQA 28 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g 28 (523)
..+|||+|||++|+++. .+|
T Consensus 4 ~~igIDlGT~~s~v~~~-~~~ 23 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLR-GKG 23 (344)
T ss_dssp CEEEEEECSSEEEEEET-TTE
T ss_pred ceEEEEcCcCcEEEEEC-CCC
Confidence 47899999999999864 345
No 161
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=47.16 E-value=7.5 Score=41.56 Aligned_cols=20 Identities=40% Similarity=0.385 Sum_probs=16.8
Q ss_pred eEEEEecCCCCceEEEEcCCC
Q 009868 8 FIGAIDQGTTSTRFIIYDHQA 28 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g 28 (523)
.++|||+|||++.+++++ +|
T Consensus 3 ~viGIDlGTt~s~va~~~-~g 22 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMD-GT 22 (605)
T ss_dssp -CEEEECCSSEEEEEEEE-TT
T ss_pred CEEEEEcCCcCEEEEEEE-CC
Confidence 378999999999999986 45
No 162
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=46.61 E-value=28 Score=29.31 Aligned_cols=24 Identities=21% Similarity=0.097 Sum_probs=20.9
Q ss_pred ceEEEEecCCCCceEEEEcCCCCE
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQARP 30 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~i 30 (523)
..+||||+|+..+=+++-|..+.+
T Consensus 3 ~~iLglD~G~kriGvAvsd~~~~~ 26 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRITGT 26 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETTTTE
T ss_pred CeEEEEEeCCCEEEEEEEcCCCCE
Confidence 358999999999999999987754
No 163
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=46.51 E-value=7.3 Score=39.33 Aligned_cols=47 Identities=15% Similarity=0.010 Sum_probs=33.5
Q ss_pred ccEEEEecCccccHHHHHHHHhhcCCc----------------------eeec---CCCCccHHHHHHHHHH
Q 009868 423 EFLLRVDGGATVNNLLMQIQADLLGSP----------------------VIRP---ADIETTALGAAFAAGL 469 (523)
Q Consensus 423 ~~~i~~~GG~a~s~~~~qi~Advlg~p----------------------v~~~---~~~e~~alGaA~lA~~ 469 (523)
++.|+++||.|+-+-+.+.+.+-++.. |.+. +...++.+|++++|..
T Consensus 316 ~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 316 YKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 578999999999888887777654422 2222 2345788999998864
No 164
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=44.43 E-value=7.8 Score=42.05 Aligned_cols=18 Identities=11% Similarity=0.180 Sum_probs=16.1
Q ss_pred EEEEecCCCCceEEEEcC
Q 009868 9 IGAIDQGTTSTRFIIYDH 26 (523)
Q Consensus 9 ~lgIDiGtt~~K~~l~d~ 26 (523)
++|||+|||++.+++++.
T Consensus 4 ~iGIDlGTtns~va~~~~ 21 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVARN 21 (675)
T ss_dssp CEEEECCSSEEEEEEEET
T ss_pred EEEEEcCCCcEEEEEEEC
Confidence 789999999999998764
No 165
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=44.42 E-value=18 Score=34.68 Aligned_cols=32 Identities=22% Similarity=0.169 Sum_probs=22.6
Q ss_pred CCcEEEeccchhhhhhcCCCCCCCeEEEecCce
Q 009868 247 GIPISGCLGDQHAAMLGQACKKGEAKSTYGTGA 279 (523)
Q Consensus 247 g~pV~~g~gD~~aa~~g~g~~~g~~~~~~GTs~ 279 (523)
+.||.. ..|..++++|.......+++++||+.
T Consensus 102 ~~pv~v-~NDa~aaa~ge~~~~~~v~v~~GTGi 133 (305)
T 1zc6_A 102 FARLSL-ATDGYTTLLGAHGGQPGIIVALGTGS 133 (305)
T ss_dssp CSEEEE-ECHHHHHHHHHTTTSSEEEEEESSSE
T ss_pred CceEEE-ECCHHHHHHhhcCCCCeEEEEecCCe
Confidence 467654 47999998885333456788999985
No 166
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=44.12 E-value=24 Score=27.70 Aligned_cols=22 Identities=18% Similarity=0.345 Sum_probs=19.7
Q ss_pred EEEEecCCCCceEEEEcCCCCE
Q 009868 9 IGAIDQGTTSTRFIIYDHQARP 30 (523)
Q Consensus 9 ~lgIDiGtt~~K~~l~d~~g~i 30 (523)
+||||+|+..+=+++-|..+.+
T Consensus 3 iLglD~G~kriGvAvsd~~~~~ 24 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEEGVPL 24 (98)
T ss_dssp EEEEEESSSEEEEEEECSCCSS
T ss_pred EEEEEeCCCEEEEEEEeCCCCe
Confidence 7999999999999999987754
No 167
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=43.44 E-value=24 Score=28.84 Aligned_cols=37 Identities=27% Similarity=0.381 Sum_probs=31.8
Q ss_pred EeCHHHHHHHHHHHHHHHHHHHhhCCCCc-ccCceEEEEccc
Q 009868 49 EHEPMEILESVRVCMAKALDKATADGHNV-DSGLKAIGLTNQ 89 (523)
Q Consensus 49 e~d~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~I~aIgis~~ 89 (523)
+.+++++++++.+.+.+++++ +++++ ++ |.+|-||.+
T Consensus 13 ~n~~e~I~~at~eLl~~i~~~---N~l~~~~d-ivSv~FT~T 50 (122)
T 1ufy_A 13 EDTPEAIHQATRELLLKMLEA---NGIQSYEE-LAAVIFTVT 50 (122)
T ss_dssp SSSHHHHHHHHHHHHHHHHHH---HTCCCGGG-EEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHh---cCCCChHh-EEEEEEEeC
Confidence 346899999999999999987 78888 99 999988874
No 168
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=43.18 E-value=38 Score=34.76 Aligned_cols=48 Identities=17% Similarity=0.159 Sum_probs=34.7
Q ss_pred EEEEecCcc-ccHHHHHHHHhhc-----CCceeecCCCCccHHHHHHHHHHhcc
Q 009868 425 LLRVDGGAT-VNNLLMQIQADLL-----GSPVIRPADIETTALGAAFAAGLAIG 472 (523)
Q Consensus 425 ~i~~~GG~a-~s~~~~qi~Advl-----g~pv~~~~~~e~~alGaA~lA~~~~G 472 (523)
.|-+.|+.- +.|.+.+.+...+ +++|......+++.+|||++|+++..
T Consensus 410 ~VgvDGsv~~~yp~f~~~~~~~l~~l~~~~~v~l~~a~DGSg~GAAliAa~a~~ 463 (470)
T 3f9m_A 410 TVGVDGSVYKLHPSFKERFHASVRRLTPSCEITFIESEEGSGRGAALVSAVACK 463 (470)
T ss_dssp EEEEECHHHHHCTTHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHHHHTC
T ss_pred EEEEeccHHHhCchHHHHHHHHHHHHcCCCeEEEEEcCCCcHHHHHHHHHHHHH
Confidence 455667766 3666655555542 46788877889999999999999753
No 169
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=43.13 E-value=73 Score=29.93 Aligned_cols=63 Identities=17% Similarity=0.235 Sum_probs=43.9
Q ss_pred EEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEcc
Q 009868 9 IGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLTN 88 (523)
Q Consensus 9 ~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis~ 88 (523)
+|.||+|.|++|.++|| +++++...+.+++ ..+..+++...+ +++++. .++++.+ |.+|.+|+
T Consensus 2 lL~IDIGNT~ik~gl~~-~~~l~~~~r~~T~--------~~~t~de~~~~l----~~ll~~---~~~~~~~-i~~iiISS 64 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE-EGELRQHWRMETD--------RHKTEDEYGMLV----KQLLEH---EGLSFED-VKGIIVSS 64 (268)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEECC--------TTCCHHHHHHHH----HHHHHH---TTCCGGG-CCEEEEEE
T ss_pred EEEEEECcCcEEEEEEE-CCEEEEEEEecCC--------CcCCHHHHHHHH----HHHHHH---cCCCccc-CcEEEEEc
Confidence 57899999999999998 5677777776654 123456665544 444444 4556667 88888876
No 170
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=40.44 E-value=35 Score=31.80 Aligned_cols=45 Identities=24% Similarity=0.350 Sum_probs=29.7
Q ss_pred ccEEEEecCcccc-HHHHHHHHhhcCCceeecC-CCCccHHHHHHHHHH
Q 009868 423 EFLLRVDGGATVN-NLLMQIQADLLGSPVIRPA-DIETTALGAAFAAGL 469 (523)
Q Consensus 423 ~~~i~~~GG~a~s-~~~~qi~Advlg~pv~~~~-~~e~~alGaA~lA~~ 469 (523)
++.|++.||.++. +.+.+.+. ...+|..+. ..++.++|||.++..
T Consensus 215 P~~IvlgG~i~~~~~~~~~~~~--~~~~i~~s~l~~~a~~~GAa~l~~~ 261 (267)
T 1woq_A 215 PELFIVGGGISKRADEYLPNLR--LRTPIVPAVLRNEAGIVGAAIEIAL 261 (267)
T ss_dssp CSEEEEESGGGGGGGGTGGGCC--CSSCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeChhhcccHHHHHhhc--cCceEEECCcCCcHHHHHHHHHHHh
Confidence 6889999998864 44433322 235566665 356789999998754
No 171
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=39.54 E-value=32 Score=34.13 Aligned_cols=49 Identities=18% Similarity=0.072 Sum_probs=35.5
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCcc-ccHHHHHHHHhhc
Q 009868 389 ARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGAT-VNNLLMQIQADLL 446 (523)
Q Consensus 389 ~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a-~s~~~~qi~Advl 446 (523)
++-++|-.+|.++..+-.+....+ . ++.|+++||.. +|+.+++.+.+-+
T Consensus 289 A~lA~d~f~yri~k~IGa~aa~L~-g--------vDaIVFTgGIgEns~~iR~~i~~~l 338 (384)
T 3khy_A 289 AKLAIEIFSHRVAKFVASYMIYFN-K--------LDALVFTGGIGENAANIRKNIISKL 338 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCS-S--------CCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-C--------CCEEEECCccccCcHHHHHHHHhhc
Confidence 345678888888888777754334 4 89999999998 5676777665543
No 172
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=39.29 E-value=23 Score=35.48 Aligned_cols=31 Identities=13% Similarity=0.223 Sum_probs=24.7
Q ss_pred eEEEEecCCCCceEEEEcC-CCCEEEEEEeee
Q 009868 8 FIGAIDQGTTSTRFIIYDH-QARPIGSHQVEF 38 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~-~g~i~~~~~~~~ 38 (523)
.+|.|..|+||+|..|||. +.+++.+..++.
T Consensus 2 ~ILviN~GSSS~K~~l~~~~~~~~l~~g~ie~ 33 (403)
T 2iir_A 2 RVLVINSGSSSIKYQLIEMEGEKVLCKGIAER 33 (403)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEC
T ss_pred eEEEEeCCchhheeEEEEcCCCcEEEEEEEEe
Confidence 4889999999999999995 456777665543
No 173
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=39.17 E-value=31 Score=34.84 Aligned_cols=55 Identities=13% Similarity=-0.010 Sum_probs=38.5
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhhcc--ccccccccCccEEEEecCcc-ccHHHHHHHHhhcC
Q 009868 388 IARAVLESMCFQVKDVLDSMQKDAVE--KGVIKDAKSEFLLRVDGGAT-VNNLLMQIQADLLG 447 (523)
Q Consensus 388 l~rAv~Egia~~~r~~l~~l~~~~g~--~~~~~~~~~~~~i~~~GG~a-~s~~~~qi~Advlg 447 (523)
-++-++|-.+|.++..+-.+.-..+. + .|+++.|+++||.. +|+.+++.+.+-++
T Consensus 321 ~A~lA~d~f~yri~k~IGa~aa~L~~~~~-----~G~vDaIVFTGGIGEns~~iR~~i~~~l~ 378 (438)
T 4h0p_A 321 KAKLTYAVFLDRLLNFVAQYLFKLLSEVP-----IESIDGLVFSGGIGEKGAELRRDVLKKLA 378 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSC-----GGGSCEEEEEHHHHHHCHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccc-----CCCCCEEEECCccccCcHHHHHHHHHhHh
Confidence 46667888999998887766543330 0 01289999999985 88888877666543
No 174
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=38.36 E-value=17 Score=35.30 Aligned_cols=31 Identities=26% Similarity=0.255 Sum_probs=25.7
Q ss_pred EEEEecCCCCceEEEEcCCCCEEEEEEeeeee
Q 009868 9 IGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQ 40 (523)
Q Consensus 9 ~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~ 40 (523)
.+.+|||+.|+-.++++ ++++....+.+...
T Consensus 133 ~lviDIGGGStEl~~~~-~~~~~~~~Sl~lG~ 163 (315)
T 3mdq_A 133 SLAMDIGGGSVEFIIGN-KNEILWKQSFEIGG 163 (315)
T ss_dssp EEEEEECSSCEEEEEEC-SSCEEEEEEESCCH
T ss_pred EEEEEeCCCceEEEEEE-CCeEeeeEEEechh
Confidence 56799999999999997 67888877877754
No 175
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=38.25 E-value=7.2 Score=37.25 Aligned_cols=41 Identities=10% Similarity=0.093 Sum_probs=27.7
Q ss_pred ccEEEEecCccccHHHHHHHHhhcCC---ceeecCCCCccHHHHHHHH
Q 009868 423 EFLLRVDGGATVNNLLMQIQADLLGS---PVIRPADIETTALGAAFAA 467 (523)
Q Consensus 423 ~~~i~~~GG~a~s~~~~qi~Advlg~---pv~~~~~~e~~alGaA~lA 467 (523)
++.|++.||.+++ +.+.+...+.. ++..+ .+++++|||.+|
T Consensus 233 p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~--~~a~~~GAa~la 276 (291)
T 1zxo_A 233 QYPVHFIGSIAYC--YKEILQDAARQTGIQIGKI--LQSPMEGLIQYH 276 (291)
T ss_dssp TSCEEECSHHHHH--THHHHHHHTTTTTCCEEEE--CSCTHHHHHTTS
T ss_pred CceEEEECcHHHH--HHHHHHHHHhcCCcEEeec--CCCHHHHHHHHH
Confidence 6789999998887 44444444543 34433 478899999875
No 176
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=37.31 E-value=10 Score=39.63 Aligned_cols=63 Identities=21% Similarity=0.185 Sum_probs=34.9
Q ss_pred CceEEEEecCCCCceEEEEc--CCCCEEE--EEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCccc
Q 009868 6 EVFIGAIDQGTTSTRFIIYD--HQARPIG--SHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDS 79 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d--~~g~i~~--~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 79 (523)
|+|+.|||||.+++-++|-+ .+|++-. +.-.++. .-.| ..++..- +..++++++++ .+.+.++
T Consensus 1 m~~i~gvdign~tte~~la~~~~~~~~~f~~s~~~~tt---g~kg-t~~n~~g----~~~~l~~~~~~---~~~~~~~ 67 (610)
T 2d0o_A 1 MRYIAGIDIGNSSTEVALATLDEAGALTITHSALAETT---GIKG-TLRNVFG----IQEALALVARG---AGIAVSD 67 (610)
T ss_dssp CEEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEEECC---SSTT-STTHHHH----HHHHHHHHHHH---HTCCGGG
T ss_pred CcEEEEEecCCcchheeeeeecCCCceEEeeccccccC---CccC-cHHHHHH----HHHHHHHHHHH---cCCChhh
Confidence 36899999998888887754 3465443 3333332 2223 1234443 44555555554 3445444
No 177
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=36.23 E-value=51 Score=33.51 Aligned_cols=47 Identities=19% Similarity=0.155 Sum_probs=32.8
Q ss_pred EEEEecCcc-ccHHHHHHHHhh----cC-CceeecCCCCccHHHHHHHHHHhc
Q 009868 425 LLRVDGGAT-VNNLLMQIQADL----LG-SPVIRPADIETTALGAAFAAGLAI 471 (523)
Q Consensus 425 ~i~~~GG~a-~s~~~~qi~Adv----lg-~pv~~~~~~e~~alGaA~lA~~~~ 471 (523)
.|-+.|+.- +-|.+.+.+... ++ .+|......+++.+|||++||++.
T Consensus 386 ~VgvDGsvy~~~P~f~~~l~~~l~~l~~~~~v~~~~s~DGSg~GAAl~AA~a~ 438 (445)
T 3hm8_A 386 SVGVDGTLYKLHPRFSSLVAATVRELAPRCVVTFLQSEDGSGKGAALVTAVAC 438 (445)
T ss_dssp EEEEECHHHHHCTTHHHHHHHHHHHHCTTEEEEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEeceehccChhHHHHHHHHHHHhCCCCcEEEEECCCCchHHHHHHHHHHH
Confidence 455667665 355555555444 33 567777788999999999999975
No 178
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=35.20 E-value=22 Score=35.27 Aligned_cols=30 Identities=17% Similarity=0.302 Sum_probs=24.3
Q ss_pred eEEEEecCCCCceEEEEcC-CCCEEEEEEee
Q 009868 8 FIGAIDQGTTSTRFIIYDH-QARPIGSHQVE 37 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~-~g~i~~~~~~~ 37 (523)
.+|.|..|+||+|..|||. +++++++..++
T Consensus 3 ~iLviN~GSSSlK~~l~~~~~~~~l~~G~~e 33 (384)
T 3khy_A 3 EILVLNCGSSSVKFALINPHTSQSLVTGLAE 33 (384)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEECCchhheEEEEecCCCceEEEEEEE
Confidence 6889999999999999995 56677765543
No 179
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=33.42 E-value=40 Score=33.64 Aligned_cols=51 Identities=8% Similarity=-0.016 Sum_probs=35.7
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCcc-ccHHHHHHHHhhc
Q 009868 387 HIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGAT-VNNLLMQIQADLL 446 (523)
Q Consensus 387 ~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a-~s~~~~qi~Advl 446 (523)
.-++-++|-.+|.++..+-.+....+ . ++.|+++||.. +|+.+++.+.+-+
T Consensus 300 ~~A~lA~d~f~yri~k~IGa~aa~L~-G--------vDaIVFTgGIGEns~~vR~~i~~~l 351 (404)
T 4h0o_A 300 KTCQLAFDVYIKQLAKTIGGLMVEIG-G--------LDLLVFTDQMGLEVWQVRKAICDKM 351 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT-C--------CSEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-C--------CCEEEECCccccCcHHHHHHHHhhh
Confidence 34555788888988887776643322 1 78999999985 6688777665543
No 180
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=32.51 E-value=42 Score=33.66 Aligned_cols=48 Identities=13% Similarity=0.061 Sum_probs=36.7
Q ss_pred HHHhhhhhHHHHHHHHHHhhhccccccccccCccEEEEecCcc-ccHHHHHHHHhhcC
Q 009868 391 AVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLRVDGGAT-VNNLLMQIQADLLG 447 (523)
Q Consensus 391 Av~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~~~GG~a-~s~~~~qi~Advlg 447 (523)
-++|-.+|.++..+-.+.-..| . ++.|+++||.. +|+.+++.+.+-++
T Consensus 300 lA~d~f~yri~k~IGa~~a~Lg-g--------vDaiVFTgGIGEns~~vR~~i~~~l~ 348 (408)
T 1g99_A 300 LALEIFAYKVKKFIGEYSAVLN-G--------ADAVVFTAGIGENSASIRKRILTGLD 348 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-S--------CSEEEEEHHHHHHCHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHHHHhhC-C--------CCEEEECccccccCHHHHHHHHhhhh
Confidence 3778888888887777654333 2 89999999999 88888887776653
No 181
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=30.94 E-value=19 Score=35.35 Aligned_cols=23 Identities=22% Similarity=0.322 Sum_probs=18.0
Q ss_pred ceEEEEecCCCCceEEEEcCCCCEE
Q 009868 7 VFIGAIDQGTTSTRFIIYDHQARPI 31 (523)
Q Consensus 7 ~~~lgIDiGtt~~K~~l~d~~g~i~ 31 (523)
++.+|||+||+++|+.. .+|.++
T Consensus 21 m~~igiDlG~~~tkv~~--~~g~~~ 43 (346)
T 2fsj_A 21 MVVVGLDVGYGDTKVIG--VDGKRI 43 (346)
T ss_dssp CEEEEEEECSSEEEEEC--GGGCEE
T ss_pred eEEEEEecCCcceeEEe--cCCCEE
Confidence 36799999999999884 456555
No 182
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=30.75 E-value=10 Score=39.67 Aligned_cols=54 Identities=19% Similarity=0.231 Sum_probs=34.6
Q ss_pred CceEEEEecCCCCceEEEEcC-CC--CEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHH
Q 009868 6 EVFIGAIDQGTTSTRFIIYDH-QA--RPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCM 63 (523)
Q Consensus 6 ~~~~lgIDiGtt~~K~~l~d~-~g--~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l 63 (523)
|+|+.|||||+|++.+++-+. +| +++.....++.=. .| ..++.+...+++.+++
T Consensus 1 m~~i~GiDIGnsttev~l~~~~~g~i~~l~~g~~~ttGi---KG-t~~Ni~g~~~si~~a~ 57 (607)
T 1nbw_A 1 MPLIAGIDIGNATTEVALASDYPQARAFVASGIVATTGM---KG-TRDNIAGTLAALEQAL 57 (607)
T ss_dssp -CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEECCSS---TT-SGGGHHHHHHHHHHHH
T ss_pred CcEEEEEEecCceEEEEEEEEcCCeEEEEEeecccCCcc---ce-eeeCHHHHHHHHHHHH
Confidence 368999999999999998764 35 4577766665421 33 3456665555544444
No 183
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=30.46 E-value=63 Score=30.49 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=25.3
Q ss_pred CCceEEEEecCCCCceEEEEcCCCCEEEEEEeee
Q 009868 5 KEVFIGAIDQGTTSTRFIIYDHQARPIGSHQVEF 38 (523)
Q Consensus 5 ~~~~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~ 38 (523)
|..+.|.||+|-|++|..+||.+++++...+..+
T Consensus 21 ~~~M~L~IDiGNT~ik~g~~~~~~~~~~~~r~~t 54 (271)
T 2f9w_A 21 MASMILELDCGNSLIKWRVIEGAARSVAGGLAES 54 (271)
T ss_dssp --CEEEEEEECSSCEEEEEEETTTEEEEEEEESS
T ss_pred ccCcEEEEEeCCCeeEEEEEeCCCEEEEEEEecC
Confidence 3346788999999999999986667776655443
No 184
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=30.43 E-value=27 Score=35.12 Aligned_cols=38 Identities=18% Similarity=0.201 Sum_probs=26.6
Q ss_pred CcccCCceEEEEecCCCCceEEEEcC-CCCEEEEEEeee
Q 009868 1 MAKAKEVFIGAIDQGTTSTRFIIYDH-QARPIGSHQVEF 38 (523)
Q Consensus 1 m~~~~~~~~lgIDiGtt~~K~~l~d~-~g~i~~~~~~~~ 38 (523)
|+....+.+|.|..|+||+|..|||. +.+++.+..++.
T Consensus 12 ~~~~~~~~ILviN~GSSS~K~~lf~~~~~~~l~~g~ie~ 50 (415)
T 2e1z_A 12 MASNEFPVVLVINCGSSSIKFSVLDVATCDVLMAGIADG 50 (415)
T ss_dssp -----CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEES
T ss_pred cccCCCCeEEEEECCchhheEEEEECCCCCEEEEEEEEe
Confidence 33333456899999999999999996 457777766554
No 185
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=30.23 E-value=28 Score=34.94 Aligned_cols=31 Identities=16% Similarity=0.259 Sum_probs=24.6
Q ss_pred eEEEEecCCCCceEEEEcC-CCCEEEEEEeee
Q 009868 8 FIGAIDQGTTSTRFIIYDH-QARPIGSHQVEF 38 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~-~g~i~~~~~~~~ 38 (523)
.+|.|..|+||+|..|||. +.+++.+..++.
T Consensus 2 ~ILviN~GSSS~K~~lf~~~~~~~l~~g~ie~ 33 (408)
T 1g99_A 2 KVLVINAGSSSLKYQLIDMTNESALAVGLCER 33 (408)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEES
T ss_pred eEEEEECCchhheeEEEEcCCCcEEEEEEEEe
Confidence 3789999999999999995 456777665543
No 186
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=29.38 E-value=1.3e+02 Score=30.02 Aligned_cols=88 Identities=8% Similarity=0.036 Sum_probs=55.7
Q ss_pred eEEcCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccccccCccEEE--EecCccccHHHHHHHHhhc-----C
Q 009868 375 VCIGITRFTSKAHIARAVLESMCFQVKDVLDSMQKDAVEKGVIKDAKSEFLLR--VDGGATVNNLLMQIQADLL-----G 447 (523)
Q Consensus 375 ~~~gl~~~~~~~~l~rAv~Egia~~~r~~l~~l~~~~g~~~~~~~~~~~~~i~--~~GG~a~s~~~~qi~Advl-----g 447 (523)
-|+.+....+.+++..| ++.+.+. .. ++-|+ +.||.++.+..-+-+.+.+ +
T Consensus 292 NflDvgG~a~~e~~~~a------------l~~il~d--~~--------v~~ilvni~ggi~~~d~vA~gii~a~~~~~~~ 349 (395)
T 2fp4_B 292 NFLDLGGGVKESQVYQA------------FKLLTAD--PK--------VEAILVNIFGGIVNCAIIANGITKACRELELK 349 (395)
T ss_dssp EEEECCSSCCHHHHHHH------------HHHHHHC--TT--------CCEEEEEEEESSSCHHHHHHHHHHHHHHHTCC
T ss_pred CcEEECCCCCHHHHHHH------------HHHHhCC--CC--------CCEEEEEecCCccCcHHHHHHHHHHHHhcCCC
Confidence 45555556676666654 3333332 22 55555 5689999888777666654 6
Q ss_pred CceeecCCCCccHHHHHHHHHHhcccc--CChhHHhccc
Q 009868 448 SPVIRPADIETTALGAAFAAGLAIGVF--KEEEIFDSGE 484 (523)
Q Consensus 448 ~pv~~~~~~e~~alGaA~lA~~~~G~~--~~~~~a~~~~ 484 (523)
+||.+.-.....-.|-.++...++.+| +++++|+++.
T Consensus 350 ~Pivvrl~G~n~~~g~~~L~~~gl~~~~~~~~~~Aa~~~ 388 (395)
T 2fp4_B 350 VPLVVRLEGTNVHEAQNILTNSGLPITSAVDLEDAAKKA 388 (395)
T ss_dssp SCEEEEEEETTHHHHHHHHHHTCSCCEECSSHHHHHHHH
T ss_pred CeEEEEcCCCCHHHHHHHHHHCCCceEeCCCHHHHHHHH
Confidence 788763222224568889887778888 8998886654
No 187
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=28.34 E-value=93 Score=30.23 Aligned_cols=30 Identities=23% Similarity=0.298 Sum_probs=21.7
Q ss_pred EEEEecCCCCceEEEEcCCCCEEEEEEeeee
Q 009868 9 IGAIDQGTTSTRFIIYDHQARPIGSHQVEFT 39 (523)
Q Consensus 9 ~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~ 39 (523)
++|+|||+-|+|+++++.+|++ ...+.+.|
T Consensus 2 iiG~DIGGAn~K~a~~~~~g~~-~~~~~~~P 31 (334)
T 3cet_A 2 ILGIDIGGANTKITELHENGEF-KVHHLYFP 31 (334)
T ss_dssp EEEEEEC--CEEEEEECSTTCC-EEEEC---
T ss_pred eeEEEecccceeeeeecCCCce-EEEEEecC
Confidence 7899999999999999989987 55566655
No 188
>2ov7_A 50S ribosomal protein L1; 2.30A {Thermus thermophilus} PDB: 2oum_A 2vpl_A
Probab=27.21 E-value=88 Score=26.19 Aligned_cols=80 Identities=11% Similarity=0.103 Sum_probs=49.5
Q ss_pred CCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEccccceeEEe
Q 009868 17 TSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLTNQRETTVLW 96 (523)
Q Consensus 17 t~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis~~~~~~v~~ 96 (523)
..+|..+.=.+|..+..........+-.-|....+++++.+.+...+..+.... +.+..... |..|-++++|.-.+.+
T Consensus 56 q~vrgtV~LP~gg~v~fr~dk~~~ih~~VGk~sf~~e~L~eNi~a~i~~l~~~k-p~~~kg~~-ik~v~issTMGp~i~i 133 (137)
T 2ov7_A 56 QNVRGTVSLPHGGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHK-PEGAKGTF-LRSVYVTTTMGPSVRI 133 (137)
T ss_dssp CCCEEEEECTTSCEEEEECCTTSEEEEEEEETTSCHHHHHHHHHHHHHHHHTTS-CSSCCSCS-EEEEEEEETTSCCEEB
T ss_pred ceeeEEEEcCCCCeEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHhC-cccccCce-EEEEEEECCCCCCEEe
Confidence 467766666665222111111111122235567899999999988888777552 23333346 9999999988888888
Q ss_pred eC
Q 009868 97 SK 98 (523)
Q Consensus 97 d~ 98 (523)
|.
T Consensus 134 d~ 135 (137)
T 2ov7_A 134 NP 135 (137)
T ss_dssp CT
T ss_pred cC
Confidence 75
No 189
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=26.53 E-value=79 Score=29.64 Aligned_cols=63 Identities=13% Similarity=0.124 Sum_probs=45.9
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEc
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLT 87 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis 87 (523)
++|+||+|.|++|.++||. ++++...+.+++ ....+++.. .++++++. .+.++++ |.+|+||
T Consensus 3 MlL~IDIGNT~iK~gl~d~-~~l~~~~r~~T~---------~~t~de~~~----~l~~ll~~---~~~~~~~-I~~iiIS 64 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG-DEIKLRFRHTSK---------VSTSDELGI----FLKSVLRE---NNCSPET-IRKIAIC 64 (266)
T ss_dssp CEEEEEECSSEEEEEEEET-TEEEEEEEEECS---------CCCHHHHHH----HHHHHHHT---TTCCGGG-CCEEEEE
T ss_pred eEEEEEECCCeEEEEEEEC-CEEEEEEEecCC---------CCCHHHHHH----HHHHHHHH---cCCChhh-ceEEEEe
Confidence 4789999999999999985 688877777664 234566543 34455554 4556678 9999998
Q ss_pred c
Q 009868 88 N 88 (523)
Q Consensus 88 ~ 88 (523)
+
T Consensus 65 S 65 (266)
T 3djc_A 65 S 65 (266)
T ss_dssp E
T ss_pred c
Confidence 8
No 190
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=25.95 E-value=38 Score=34.06 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=25.7
Q ss_pred Ccc-cCCceEEEEecCCCCceEEEEcC-CCCEEEEEEe
Q 009868 1 MAK-AKEVFIGAIDQGTTSTRFIIYDH-QARPIGSHQV 36 (523)
Q Consensus 1 m~~-~~~~~~lgIDiGtt~~K~~l~d~-~g~i~~~~~~ 36 (523)
|++ |+.+++|.|..|+||+|..|||. +++++.+...
T Consensus 12 m~~~Ms~klILviN~GSSS~K~~lf~~~~~~~l~~G~~ 49 (415)
T 3sk3_A 12 MASHMSSKLVLVLNCGSSSLKFAIIDAVNGDEYLSGLA 49 (415)
T ss_dssp ------CCEEEEEEECSSCEEEEEEETTTCCEEEEEEE
T ss_pred ccccCCCCeEEEEeCchHhhhheeEECCCCCEEEEeeE
Confidence 444 44578999999999999999994 6777776543
No 191
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=23.82 E-value=26 Score=35.19 Aligned_cols=21 Identities=19% Similarity=0.099 Sum_probs=17.0
Q ss_pred eEEEEecCCCCceEEEEcCCC
Q 009868 8 FIGAIDQGTTSTRFIIYDHQA 28 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g 28 (523)
-.++||+||+++|++...+++
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~ 26 (418)
T 1k8k_A 6 PACVVDCGTGYTKLGYAGNTE 26 (418)
T ss_dssp CCEEEEECSSEEEEEETTCSS
T ss_pred CeEEEECCCCeEEEeeCCCCC
Confidence 357899999999999766544
No 192
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=23.45 E-value=14 Score=36.89 Aligned_cols=47 Identities=19% Similarity=0.108 Sum_probs=20.6
Q ss_pred ccEEEEecCccccHHHHHHHHhhcCC-----------------ceeec--C-CCCccHHHHHHHHHH
Q 009868 423 EFLLRVDGGATVNNLLMQIQADLLGS-----------------PVIRP--A-DIETTALGAAFAAGL 469 (523)
Q Consensus 423 ~~~i~~~GG~a~s~~~~qi~Advlg~-----------------pv~~~--~-~~e~~alGaA~lA~~ 469 (523)
.+.|+++||.|.-+-+.+.+.+-++. +|.+. . ...++.+|++++|..
T Consensus 298 ~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 298 YKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred HhCEEEeCcccccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 46799999999988777766665543 34442 2 335677899888874
No 193
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=22.96 E-value=31 Score=36.83 Aligned_cols=26 Identities=19% Similarity=0.089 Sum_probs=22.7
Q ss_pred ccEEEEecCccccHHHHHHHHhhcCC
Q 009868 423 EFLLRVDGGATVNNLLMQIQADLLGS 448 (523)
Q Consensus 423 ~~~i~~~GG~a~s~~~~qi~Advlg~ 448 (523)
.+.|.++|||++-+-+--++-|.++.
T Consensus 501 y~nilivGggski~g~~~~L~dri~i 526 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRINI 526 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHHHh
Confidence 46799999999999999999998873
No 194
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=22.28 E-value=95 Score=28.69 Aligned_cols=61 Identities=16% Similarity=0.296 Sum_probs=42.7
Q ss_pred eEEEEecCCCCceEEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHHHHHHHHhhCCCCcccCceEEEEc
Q 009868 8 FIGAIDQGTTSTRFIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMAKALDKATADGHNVDSGLKAIGLT 87 (523)
Q Consensus 8 ~~lgIDiGtt~~K~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~aIgis 87 (523)
++|+||+|.|++|.++|| +++++...+.+++ ..+..+++...+.+.++. . ..+ |.+|.||
T Consensus 4 M~L~IDIGNT~ik~gl~~-~~~l~~~~r~~T~--------~~~t~de~~~~l~~l~~~---~-------~~~-i~~i~Is 63 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-DGKTFRRWRLSTG--------VFQTEDELFSHLHPLLGD---A-------MRE-IKGIGVA 63 (249)
T ss_dssp EEEEEEECSSEEEEEEES-SSSSCEEEEEECC--------TTCCHHHHHHHHHHHHGG---G-------GGG-EEEEEEE
T ss_pred eEEEEEECCCeEEEEEEE-CCEEEEEEEecCC--------CCCCHHHHHHHHHHHHhh---c-------ccc-CCEEEEE
Confidence 378999999999999998 6677777777665 134567776555543332 1 245 8888888
Q ss_pred c
Q 009868 88 N 88 (523)
Q Consensus 88 ~ 88 (523)
+
T Consensus 64 S 64 (249)
T 3bex_A 64 S 64 (249)
T ss_dssp E
T ss_pred c
Confidence 7
No 195
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=21.21 E-value=70 Score=27.16 Aligned_cols=37 Identities=8% Similarity=-0.014 Sum_probs=22.1
Q ss_pred EEEEcCCCCEEEEEEeeeeeccCCCCeEEeCHHHHHHHHHHHHH
Q 009868 21 FIIYDHQARPIGSHQVEFTQFYPEAGWVEHEPMEILESVRVCMA 64 (523)
Q Consensus 21 ~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~ 64 (523)
..|+|.+|+|+.....+.+ ..+.|.+++++.+.+...
T Consensus 124 tflID~~G~I~~~~~~~~~-------~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 124 VFIVKPDGTVAYKWVTDNP-------LNEPDYDEVVREANKIAG 160 (164)
T ss_dssp EEEECTTSBEEEEEECSCT-------TCCCCHHHHHHHHHHHHH
T ss_pred EEEECCCCEEEEEEEeCCC-------CCCCCHHHHHHHHHHHhc
Confidence 3689999999865433222 123467777666554433
No 196
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=20.83 E-value=80 Score=30.83 Aligned_cols=88 Identities=13% Similarity=0.165 Sum_probs=44.5
Q ss_pred EEEEecCCCCceEEEEcC--C---CCEEEEEEeeeeeccCCCCeEEeC--HHHHHHHHHHHHHHHHHHHhhCCCCcccCc
Q 009868 9 IGAIDQGTTSTRFIIYDH--Q---ARPIGSHQVEFTQFYPEAGWVEHE--PMEILESVRVCMAKALDKATADGHNVDSGL 81 (523)
Q Consensus 9 ~lgIDiGtt~~K~~l~d~--~---g~i~~~~~~~~~~~~~~~g~~e~d--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I 81 (523)
.+.||||+.|+-.++++. . ++++...+.|+....-...+...+ ..+-++.+.+.+++.++.+.. ........
T Consensus 148 ~lviDIGGGStel~~~~~~~~~~~~~~~~~~SlplG~v~lt~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~-~~~~~~~~ 226 (343)
T 3cer_A 148 YLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTERHLTNDPPTQTQIDEAVADVDEHIDEAFR-TVDAGKAR 226 (343)
T ss_dssp EEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESCCHHHHHHHTCCSSSCCHHHHHHHHHHHHHHHHHHHT-TSCGGGCS
T ss_pred EEEEEeCCCceEEEEeecCccCcccccceeEEEehhHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH-hhhhcCCc
Confidence 667999999999999864 2 445566666664321100000011 123344555555555544321 11111102
Q ss_pred eEEEEccccceeEEee
Q 009868 82 KAIGLTNQRETTVLWS 97 (523)
Q Consensus 82 ~aIgis~~~~~~v~~d 97 (523)
..||+++..-++.-+.
T Consensus 227 ~lvg~gGt~~~la~l~ 242 (343)
T 3cer_A 227 TIIGVSGTVTTMTALA 242 (343)
T ss_dssp EEEEESHHHHHHHHHH
T ss_pred EEEEEchHHHHHHHHH
Confidence 4677777655544443
Done!