Query 009871
Match_columns 523
No_of_seqs 592 out of 5099
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 14:51:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009871.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009871hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bzb_A Uncharacterized protein 99.8 3.4E-20 1.2E-24 180.9 18.8 183 310-511 54-254 (281)
2 3v97_A Ribosomal RNA large sub 99.8 4.3E-17 1.5E-21 177.4 31.0 169 287-485 502-681 (703)
3 2a14_A Indolethylamine N-methy 99.7 4.3E-16 1.5E-20 150.3 11.8 161 40-201 16-239 (263)
4 2gb4_A Thiopurine S-methyltran 99.6 1.7E-15 5.6E-20 144.9 12.9 152 40-198 31-225 (252)
5 3lpm_A Putative methyltransfer 99.6 1.9E-14 6.4E-19 138.5 16.7 161 292-484 18-199 (259)
6 4gek_A TRNA (CMO5U34)-methyltr 99.6 4.4E-15 1.5E-19 142.7 11.4 73 74-152 69-145 (261)
7 3sm3_A SAM-dependent methyltra 99.6 6E-15 2.1E-19 139.3 11.8 152 42-205 3-212 (235)
8 3lcc_A Putative methyl chlorid 99.6 3.4E-15 1.1E-19 141.4 9.7 163 41-212 32-219 (235)
9 3bus_A REBM, methyltransferase 99.6 3.9E-14 1.3E-18 137.2 17.2 151 316-485 42-215 (273)
10 2kw5_A SLR1183 protein; struct 99.6 4.6E-15 1.6E-19 137.0 9.7 142 75-226 30-196 (202)
11 3kkz_A Uncharacterized protein 99.6 4.3E-14 1.5E-18 136.5 15.9 134 332-485 43-195 (267)
12 1nkv_A Hypothetical protein YJ 99.6 1.8E-14 6.2E-19 138.1 13.0 141 324-484 25-185 (256)
13 3f4k_A Putative methyltransfer 99.6 8.2E-14 2.8E-18 133.6 17.6 135 331-485 42-195 (257)
14 3g5l_A Putative S-adenosylmeth 99.6 3.8E-14 1.3E-18 135.7 15.0 142 327-491 36-221 (253)
15 3dtn_A Putative methyltransfer 99.6 3.2E-14 1.1E-18 134.4 13.8 74 73-152 42-115 (234)
16 3g5l_A Putative S-adenosylmeth 99.6 1.6E-14 5.3E-19 138.4 11.6 77 69-152 38-114 (253)
17 3ujc_A Phosphoethanolamine N-m 99.5 4.1E-14 1.4E-18 136.2 14.0 148 316-485 36-205 (266)
18 2ex4_A Adrenal gland protein A 99.5 8.9E-15 3E-19 139.1 8.9 115 75-199 79-224 (241)
19 1xxl_A YCGJ protein; structura 99.5 1.4E-13 4.9E-18 130.6 17.1 146 315-485 5-173 (239)
20 3vc1_A Geranyl diphosphate 2-C 99.5 1.1E-13 3.7E-18 137.0 16.8 141 325-485 106-268 (312)
21 1kpg_A CFA synthase;, cyclopro 99.5 2.6E-13 8.9E-18 132.4 18.8 146 318-485 47-227 (287)
22 3dlc_A Putative S-adenosyl-L-m 99.5 2E-14 6.8E-19 134.1 10.2 143 323-485 32-202 (219)
23 2o57_A Putative sarcosine dime 99.5 1.2E-13 4E-18 135.6 15.9 135 332-485 79-233 (297)
24 3dh0_A SAM dependent methyltra 99.5 8.7E-14 3E-18 130.0 14.1 133 333-485 35-180 (219)
25 3dlc_A Putative S-adenosyl-L-m 99.5 3E-14 1E-18 132.8 10.8 129 65-199 34-202 (219)
26 3mgg_A Methyltransferase; NYSG 99.5 3.5E-14 1.2E-18 137.8 11.1 86 63-152 25-111 (276)
27 3hem_A Cyclopropane-fatty-acyl 99.5 3.1E-13 1.1E-17 132.9 17.8 143 321-485 58-242 (302)
28 3l8d_A Methyltransferase; stru 99.5 7.4E-14 2.5E-18 132.6 12.8 120 74-201 52-201 (242)
29 3evz_A Methyltransferase; NYSG 99.5 8.5E-14 2.9E-18 131.2 13.1 131 334-484 54-204 (230)
30 3e23_A Uncharacterized protein 99.5 1.3E-13 4.5E-18 128.1 14.1 137 74-227 42-204 (211)
31 1vl5_A Unknown conserved prote 99.5 1.9E-13 6.5E-18 131.4 15.6 131 334-485 36-189 (260)
32 1pjz_A Thiopurine S-methyltran 99.5 1.8E-14 6E-19 133.3 7.9 122 72-200 19-176 (203)
33 3dh0_A SAM dependent methyltra 99.5 6.7E-14 2.3E-18 130.8 11.9 126 70-199 32-180 (219)
34 3pfg_A N-methyltransferase; N, 99.5 4.9E-14 1.7E-18 135.7 11.0 68 74-152 49-116 (263)
35 3ujc_A Phosphoethanolamine N-m 99.5 2.4E-13 8E-18 130.9 15.6 128 65-198 45-204 (266)
36 4htf_A S-adenosylmethionine-de 99.5 3.2E-13 1.1E-17 131.7 16.4 142 323-485 58-231 (285)
37 3g2m_A PCZA361.24; SAM-depende 99.5 7.5E-14 2.6E-18 137.2 11.8 76 69-152 77-156 (299)
38 3jwg_A HEN1, methyltransferase 99.5 2E-13 6.9E-18 127.6 13.8 134 334-483 28-189 (219)
39 3mgg_A Methyltransferase; NYSG 99.5 4.5E-13 1.5E-17 129.9 16.6 146 320-485 22-197 (276)
40 3sm3_A SAM-dependent methyltra 99.5 1.4E-13 4.6E-18 129.9 12.5 135 335-486 30-207 (235)
41 3kkz_A Uncharacterized protein 99.5 1.9E-13 6.6E-18 131.9 13.7 121 73-198 44-194 (267)
42 2ex4_A Adrenal gland protein A 99.5 1.4E-13 4.9E-18 130.7 12.4 131 335-485 79-224 (241)
43 2i62_A Nicotinamide N-methyltr 99.5 2.1E-13 7.2E-18 131.2 13.5 160 41-201 18-240 (265)
44 3h2b_A SAM-dependent methyltra 99.5 1.5E-13 5E-18 126.9 11.9 116 76-201 42-183 (203)
45 2nxc_A L11 mtase, ribosomal pr 99.5 1.3E-13 4.5E-18 132.0 11.9 145 312-485 99-243 (254)
46 1xtp_A LMAJ004091AAA; SGPP, st 99.5 8.5E-14 2.9E-18 133.2 10.1 123 71-199 89-237 (254)
47 4gek_A TRNA (CMO5U34)-methyltr 99.5 5.9E-13 2E-17 127.8 15.5 107 334-461 69-180 (261)
48 3jwh_A HEN1; methyltransferase 99.5 2.8E-13 9.5E-18 126.5 12.9 134 334-483 28-189 (217)
49 3grz_A L11 mtase, ribosomal pr 99.5 2.2E-13 7.5E-18 126.0 12.0 143 315-485 42-184 (205)
50 3ou2_A SAM-dependent methyltra 99.5 3.4E-13 1.2E-17 125.7 13.4 70 73-152 44-113 (218)
51 3f4k_A Putative methyltransfer 99.5 3.2E-13 1.1E-17 129.4 13.6 121 72-197 43-193 (257)
52 2xvm_A Tellurite resistance pr 99.5 2.4E-13 8.2E-18 124.8 12.1 146 70-224 27-198 (199)
53 3dmg_A Probable ribosomal RNA 99.5 8.9E-13 3E-17 133.3 17.2 174 283-485 185-372 (381)
54 2o57_A Putative sarcosine dime 99.5 2.8E-13 9.5E-18 132.9 13.1 123 72-199 79-233 (297)
55 2fk8_A Methoxy mycolic acid sy 99.5 7.4E-13 2.5E-17 131.2 16.2 145 319-485 74-253 (318)
56 3h2b_A SAM-dependent methyltra 99.5 7.2E-13 2.5E-17 122.2 15.1 125 336-486 42-182 (203)
57 2p7i_A Hypothetical protein; p 99.5 1.8E-13 6E-18 130.3 11.2 112 74-198 41-197 (250)
58 3p9n_A Possible methyltransfer 99.5 1.4E-13 4.6E-18 125.7 9.9 112 334-463 43-157 (189)
59 1dus_A MJ0882; hypothetical pr 99.5 1.4E-12 4.9E-17 118.8 16.8 164 282-476 9-173 (194)
60 1vl5_A Unknown conserved prote 99.5 4.7E-13 1.6E-17 128.6 14.1 125 70-200 32-190 (260)
61 2g72_A Phenylethanolamine N-me 99.5 1E-12 3.6E-17 128.3 16.4 158 43-201 34-257 (289)
62 3bkw_A MLL3908 protein, S-aden 99.5 4.5E-13 1.5E-17 127.1 13.4 130 334-486 42-214 (243)
63 4htf_A S-adenosylmethionine-de 99.5 7.3E-14 2.5E-18 136.2 8.1 120 75-199 68-231 (285)
64 1nkv_A Hypothetical protein YJ 99.5 2.2E-13 7.7E-18 130.4 11.1 124 68-197 29-184 (256)
65 4dcm_A Ribosomal RNA large sub 99.5 1.4E-12 4.6E-17 131.8 17.2 149 285-461 182-336 (375)
66 3e05_A Precorrin-6Y C5,15-meth 99.5 1.9E-12 6.4E-17 119.6 16.8 125 332-480 37-162 (204)
67 1xtp_A LMAJ004091AAA; SGPP, st 99.4 5E-13 1.7E-17 127.8 13.0 135 329-485 87-237 (254)
68 2p8j_A S-adenosylmethionine-de 99.4 1.4E-12 4.8E-17 120.7 15.5 145 74-227 22-206 (209)
69 3njr_A Precorrin-6Y methylase; 99.4 1.6E-12 5.4E-17 120.2 15.6 128 332-485 52-179 (204)
70 3l8d_A Methyltransferase; stru 99.4 8E-13 2.7E-17 125.4 14.0 136 323-484 43-198 (242)
71 3bkw_A MLL3908 protein, S-aden 99.4 1.3E-12 4.5E-17 123.9 15.4 79 67-152 35-113 (243)
72 1yzh_A TRNA (guanine-N(7)-)-me 99.4 2.5E-13 8.6E-18 126.6 10.1 129 67-198 34-180 (214)
73 3e8s_A Putative SAM dependent 99.4 1.1E-12 3.9E-17 122.8 14.7 124 69-199 46-208 (227)
74 4hc4_A Protein arginine N-meth 99.4 2.4E-13 8.4E-18 136.2 10.5 111 325-456 73-186 (376)
75 3bxo_A N,N-dimethyltransferase 99.4 5.6E-13 1.9E-17 126.1 12.3 68 74-152 39-106 (239)
76 3lcc_A Putative methyl chlorid 99.4 1.5E-12 5.2E-17 123.1 15.0 142 322-486 55-207 (235)
77 3e23_A Uncharacterized protein 99.4 9.9E-13 3.4E-17 122.1 13.4 133 322-485 33-181 (211)
78 2a14_A Indolethylamine N-methy 99.4 1.2E-13 4.1E-18 133.1 7.3 141 333-485 53-237 (263)
79 1wzn_A SAM-dependent methyltra 99.4 1E-12 3.5E-17 125.6 13.7 103 42-152 9-111 (252)
80 3hnr_A Probable methyltransfer 99.4 3.7E-13 1.3E-17 125.8 10.1 111 74-199 44-200 (220)
81 1xxl_A YCGJ protein; structura 99.4 1.2E-12 4E-17 124.2 13.8 126 69-200 15-174 (239)
82 2p7i_A Hypothetical protein; p 99.4 9.5E-13 3.3E-17 125.2 13.1 125 334-484 41-197 (250)
83 3bus_A REBM, methyltransferase 99.4 1.6E-12 5.5E-17 125.7 14.9 126 69-199 55-215 (273)
84 1xdz_A Methyltransferase GIDB; 99.4 1.3E-12 4.5E-17 124.0 13.6 125 74-199 69-201 (240)
85 1ri5_A MRNA capping enzyme; me 99.4 1.6E-12 5.5E-17 127.3 14.6 74 74-152 63-139 (298)
86 3dtn_A Putative methyltransfer 99.4 2.5E-12 8.6E-17 121.3 15.3 131 333-486 42-214 (234)
87 3kr9_A SAM-dependent methyltra 99.4 7.7E-13 2.6E-17 122.9 11.2 124 335-483 15-140 (225)
88 3m33_A Uncharacterized protein 99.4 1.3E-12 4.6E-17 122.7 12.9 112 74-200 47-167 (226)
89 3ccf_A Cyclopropane-fatty-acyl 99.4 6.4E-13 2.2E-17 129.1 10.7 121 69-200 51-210 (279)
90 3hm2_A Precorrin-6Y C5,15-meth 99.4 2.2E-12 7.6E-17 116.1 13.6 129 332-484 22-151 (178)
91 2i62_A Nicotinamide N-methyltr 99.4 4.8E-13 1.6E-17 128.7 9.7 141 333-485 54-238 (265)
92 3lec_A NADB-rossmann superfami 99.4 1.1E-12 3.7E-17 122.1 11.3 125 335-484 21-147 (230)
93 3vc1_A Geranyl diphosphate 2-C 99.4 7.5E-13 2.6E-17 130.9 11.0 123 73-200 115-269 (312)
94 3hnr_A Probable methyltransfer 99.4 4.1E-12 1.4E-16 118.7 15.4 125 335-485 45-200 (220)
95 3ege_A Putative methyltransfer 99.4 3.4E-13 1.1E-17 129.8 8.2 79 63-152 22-100 (261)
96 3i9f_A Putative type 11 methyl 99.4 2E-12 6.9E-17 115.6 12.6 122 334-486 16-148 (170)
97 3bkx_A SAM-dependent methyltra 99.4 3.9E-12 1.3E-16 123.2 15.7 138 332-486 40-219 (275)
98 2yqz_A Hypothetical protein TT 99.4 2.6E-12 9E-17 123.3 14.3 120 73-199 37-195 (263)
99 3orh_A Guanidinoacetate N-meth 99.4 3E-13 1E-17 128.1 7.3 118 74-199 59-209 (236)
100 2fca_A TRNA (guanine-N(7)-)-me 99.4 5E-13 1.7E-17 124.5 8.7 128 67-197 31-176 (213)
101 2ozv_A Hypothetical protein AT 99.4 1.6E-12 5.5E-17 124.9 12.4 148 318-484 23-192 (260)
102 3gu3_A Methyltransferase; alph 99.4 1.3E-12 4.4E-17 127.4 11.8 76 72-152 19-95 (284)
103 3ocj_A Putative exported prote 99.4 3.5E-13 1.2E-17 132.8 7.7 74 74-152 117-193 (305)
104 1ri5_A MRNA capping enzyme; me 99.4 1.7E-12 5.7E-17 127.2 12.6 108 334-460 63-175 (298)
105 2frn_A Hypothetical protein PH 99.4 3.3E-12 1.1E-16 123.9 14.5 125 335-483 125-254 (278)
106 1y8c_A S-adenosylmethionine-de 99.4 1.7E-12 5.8E-17 123.3 12.1 71 75-152 37-107 (246)
107 1l3i_A Precorrin-6Y methyltran 99.4 1.5E-12 5.1E-17 118.5 11.0 134 325-483 23-157 (192)
108 4fsd_A Arsenic methyltransfera 99.4 1.1E-12 3.7E-17 133.5 11.0 124 74-202 82-253 (383)
109 3dli_A Methyltransferase; PSI- 99.4 3.6E-12 1.2E-16 120.8 13.8 127 333-486 39-184 (240)
110 3gnl_A Uncharacterized protein 99.4 1.7E-12 5.7E-17 121.8 10.9 123 335-482 21-145 (244)
111 4hg2_A Methyltransferase type 99.4 4.7E-13 1.6E-17 128.1 7.3 68 74-152 38-105 (257)
112 3thr_A Glycine N-methyltransfe 99.4 1.4E-12 4.7E-17 127.6 10.9 112 334-459 56-175 (293)
113 3mti_A RRNA methylase; SAM-dep 99.4 6.1E-12 2.1E-16 114.2 14.4 131 334-485 21-168 (185)
114 3jwg_A HEN1, methyltransferase 99.4 1E-12 3.5E-17 122.8 9.5 75 74-152 28-108 (219)
115 2yxd_A Probable cobalt-precorr 99.4 4.4E-12 1.5E-16 114.5 13.4 133 323-484 23-155 (183)
116 3dli_A Methyltransferase; PSI- 99.4 4.8E-13 1.6E-17 127.0 7.1 116 74-200 40-184 (240)
117 2pxx_A Uncharacterized protein 99.4 2.6E-12 8.8E-17 119.3 11.9 104 41-152 6-113 (215)
118 3jwh_A HEN1; methyltransferase 99.4 2.5E-12 8.7E-17 119.9 11.9 75 74-152 28-108 (217)
119 3e05_A Precorrin-6Y C5,15-meth 99.4 4.8E-12 1.6E-16 116.9 13.6 115 70-193 35-161 (204)
120 3gu3_A Methyltransferase; alph 99.4 1.1E-11 3.7E-16 120.7 16.8 116 324-461 11-128 (284)
121 4fsd_A Arsenic methyltransfera 99.4 4.5E-12 1.5E-16 128.9 14.6 139 333-483 81-248 (383)
122 2xvm_A Tellurite resistance pr 99.4 4.9E-12 1.7E-16 116.0 13.5 128 334-485 31-172 (199)
123 2yqz_A Hypothetical protein TT 99.4 5.4E-12 1.8E-16 121.2 14.4 116 323-460 26-142 (263)
124 2p35_A Trans-aconitate 2-methy 99.4 3.9E-12 1.3E-16 121.9 13.2 75 69-152 27-101 (259)
125 3ocj_A Putative exported prote 99.4 2.5E-12 8.5E-17 126.7 12.1 132 334-485 117-290 (305)
126 1yzh_A TRNA (guanine-N(7)-)-me 99.4 1.1E-11 3.7E-16 115.4 15.7 132 335-485 41-181 (214)
127 1vlm_A SAM-dependent methyltra 99.4 2.2E-12 7.6E-17 120.5 10.8 110 76-201 48-189 (219)
128 1ve3_A Hypothetical protein PH 99.4 2.4E-12 8.4E-17 120.7 11.0 72 75-152 38-109 (227)
129 4df3_A Fibrillarin-like rRNA/T 99.4 6.5E-12 2.2E-16 117.3 13.6 153 312-485 50-216 (233)
130 3g07_A 7SK snRNA methylphospha 99.4 1.3E-12 4.5E-17 127.8 9.3 120 75-199 46-268 (292)
131 2kw5_A SLR1183 protein; struct 99.4 6.2E-12 2.1E-16 115.8 13.2 126 335-485 30-170 (202)
132 3pfg_A N-methyltransferase; N, 99.3 5.3E-12 1.8E-16 121.4 13.2 108 322-458 39-150 (263)
133 3cgg_A SAM-dependent methyltra 99.3 6.5E-12 2.2E-16 114.5 13.1 125 335-485 46-174 (195)
134 3ou2_A SAM-dependent methyltra 99.3 8.8E-12 3E-16 116.0 14.0 125 333-483 44-202 (218)
135 3njr_A Precorrin-6Y methylase; 99.3 6.2E-12 2.1E-16 116.2 12.8 126 70-202 50-182 (204)
136 3g89_A Ribosomal RNA small sub 99.3 1.9E-12 6.5E-17 123.4 9.5 121 74-200 79-212 (249)
137 1y8c_A S-adenosylmethionine-de 99.3 8.3E-12 2.8E-16 118.4 14.0 138 323-485 27-224 (246)
138 3g89_A Ribosomal RNA small sub 99.3 3.8E-12 1.3E-16 121.3 11.4 132 333-485 78-211 (249)
139 3g07_A 7SK snRNA methylphospha 99.3 2.2E-12 7.6E-17 126.2 9.9 142 333-485 44-268 (292)
140 2b78_A Hypothetical protein SM 99.3 3.4E-11 1.2E-15 122.2 19.0 138 334-485 211-361 (385)
141 3ggd_A SAM-dependent methyltra 99.3 1.4E-12 4.9E-17 124.0 8.4 75 74-152 55-130 (245)
142 3hm2_A Precorrin-6Y C5,15-meth 99.3 5.9E-12 2E-16 113.3 11.9 123 70-201 20-154 (178)
143 1xdz_A Methyltransferase GIDB; 99.3 3.5E-12 1.2E-16 121.0 10.8 131 334-485 69-201 (240)
144 1zx0_A Guanidinoacetate N-meth 99.3 1.7E-12 5.8E-17 122.9 8.5 118 74-194 59-204 (236)
145 3e8s_A Putative SAM dependent 99.3 5.8E-12 2E-16 117.9 12.1 128 335-486 52-209 (227)
146 1fbn_A MJ fibrillarin homologu 99.3 3.5E-12 1.2E-16 120.2 10.6 124 71-198 70-211 (230)
147 3q7e_A Protein arginine N-meth 99.3 4.6E-12 1.6E-16 127.1 12.0 115 323-457 54-171 (349)
148 1pjz_A Thiopurine S-methyltran 99.3 2.4E-12 8.1E-17 118.9 9.1 146 322-486 10-176 (203)
149 3cgg_A SAM-dependent methyltra 99.3 3.1E-12 1.1E-16 116.7 9.8 117 74-200 45-175 (195)
150 4dmg_A Putative uncharacterize 99.3 8E-11 2.7E-15 119.3 21.1 167 286-483 175-354 (393)
151 3ccf_A Cyclopropane-fatty-acyl 99.3 4.4E-12 1.5E-16 123.2 11.4 124 334-484 56-208 (279)
152 2fyt_A Protein arginine N-meth 99.3 6.4E-12 2.2E-16 125.5 12.8 114 323-456 52-168 (340)
153 2fhp_A Methylase, putative; al 99.3 2.4E-12 8.2E-17 116.9 8.8 113 334-462 43-157 (187)
154 1ve3_A Hypothetical protein PH 99.3 8.3E-12 2.8E-16 117.0 12.7 118 320-461 25-144 (227)
155 3d2l_A SAM-dependent methyltra 99.3 2.4E-12 8.3E-17 122.1 9.1 70 75-152 33-102 (243)
156 3q87_B N6 adenine specific DNA 99.3 1.9E-11 6.6E-16 109.4 14.4 133 317-485 7-148 (170)
157 2esr_A Methyltransferase; stru 99.3 1.1E-12 3.9E-17 118.1 6.3 111 333-462 29-141 (177)
158 3ege_A Putative methyltransfer 99.3 4.7E-12 1.6E-16 121.7 11.0 135 323-486 22-178 (261)
159 2p35_A Trans-aconitate 2-methy 99.3 9.6E-12 3.3E-16 119.2 12.8 108 327-460 25-133 (259)
160 3p2e_A 16S rRNA methylase; met 99.3 1.9E-12 6.4E-17 121.5 7.7 76 74-152 23-103 (225)
161 2b3t_A Protein methyltransfera 99.3 5.6E-12 1.9E-16 122.2 11.2 144 318-485 93-262 (276)
162 2fpo_A Methylase YHHF; structu 99.3 2.5E-12 8.5E-17 118.7 8.3 108 335-462 54-163 (202)
163 4hg2_A Methyltransferase type 99.3 4.6E-12 1.6E-16 121.1 10.4 111 323-463 29-139 (257)
164 4df3_A Fibrillarin-like rRNA/T 99.3 6E-12 2E-16 117.5 10.8 120 71-197 73-214 (233)
165 1jsx_A Glucose-inhibited divis 99.3 5.1E-12 1.7E-16 116.9 10.3 117 75-198 65-186 (207)
166 3lec_A NADB-rossmann superfami 99.3 3.7E-12 1.2E-16 118.5 9.2 119 74-201 20-150 (230)
167 3eey_A Putative rRNA methylase 99.3 3.3E-12 1.1E-16 117.1 8.9 151 334-502 21-189 (197)
168 3ofk_A Nodulation protein S; N 99.3 5.1E-12 1.7E-16 117.7 10.2 122 316-461 32-156 (216)
169 3grz_A L11 mtase, ribosomal pr 99.3 1.3E-11 4.4E-16 114.0 12.8 113 74-198 59-183 (205)
170 3cc8_A Putative methyltransfer 99.3 7.1E-12 2.4E-16 117.6 11.2 121 69-200 27-185 (230)
171 2igt_A SAM dependent methyltra 99.3 2.1E-11 7.3E-16 121.0 15.1 170 286-481 111-299 (332)
172 3mq2_A 16S rRNA methyltransfer 99.3 5.6E-12 1.9E-16 117.7 10.3 125 73-202 25-186 (218)
173 2g72_A Phenylethanolamine N-me 99.3 2.7E-12 9.3E-17 125.3 8.5 142 334-485 70-255 (289)
174 2ift_A Putative methylase HI07 99.3 4E-12 1.4E-16 117.2 9.1 112 335-463 53-167 (201)
175 3m70_A Tellurite resistance pr 99.3 8.1E-12 2.8E-16 121.7 11.8 118 74-200 119-260 (286)
176 3r0q_C Probable protein argini 99.3 8.4E-12 2.9E-16 126.4 12.2 119 321-460 49-170 (376)
177 3evz_A Methyltransferase; NYSG 99.3 5.2E-12 1.8E-16 118.9 9.8 121 74-198 54-204 (230)
178 2gb4_A Thiopurine S-methyltran 99.3 1.3E-11 4.6E-16 117.6 12.6 146 322-485 55-226 (252)
179 3cc8_A Putative methyltransfer 99.3 1.4E-11 4.9E-16 115.5 12.6 127 334-486 31-185 (230)
180 3g5t_A Trans-aconitate 3-methy 99.3 1.9E-11 6.4E-16 120.0 13.8 110 335-458 36-148 (299)
181 1fbn_A MJ fibrillarin homologu 99.3 3.3E-11 1.1E-15 113.4 14.8 137 328-485 67-212 (230)
182 3d2l_A SAM-dependent methyltra 99.3 2.2E-11 7.5E-16 115.4 13.6 99 335-457 33-135 (243)
183 3dxy_A TRNA (guanine-N(7)-)-me 99.3 3.8E-12 1.3E-16 118.8 8.1 120 74-194 33-171 (218)
184 3gnl_A Uncharacterized protein 99.3 4.8E-12 1.6E-16 118.7 8.7 117 75-200 21-149 (244)
185 3kr9_A SAM-dependent methyltra 99.3 7.5E-12 2.6E-16 116.2 9.8 116 75-200 15-143 (225)
186 3mb5_A SAM-dependent methyltra 99.3 1.2E-11 4E-16 118.4 11.3 134 327-486 85-222 (255)
187 3m70_A Tellurite resistance pr 99.3 1.9E-11 6.6E-16 119.0 13.1 126 335-485 120-259 (286)
188 2p8j_A S-adenosylmethionine-de 99.3 4.4E-12 1.5E-16 117.4 8.0 107 334-461 22-130 (209)
189 2aot_A HMT, histamine N-methyl 99.3 6.6E-12 2.3E-16 122.8 9.7 123 74-197 51-218 (292)
190 3bkx_A SAM-dependent methyltra 99.3 4.7E-12 1.6E-16 122.5 8.6 127 71-199 39-218 (275)
191 3c0k_A UPF0064 protein YCCW; P 99.3 7.1E-11 2.4E-15 120.5 17.7 135 335-484 220-368 (396)
192 3m33_A Uncharacterized protein 99.3 1.8E-11 6.3E-16 114.9 12.4 119 334-485 47-166 (226)
193 1yb2_A Hypothetical protein TA 99.3 1.3E-11 4.5E-16 119.6 11.4 133 326-485 101-236 (275)
194 3ggd_A SAM-dependent methyltra 99.3 3.5E-11 1.2E-15 114.3 14.2 124 316-461 39-165 (245)
195 3lpm_A Putative methyltransfer 99.3 1.4E-11 4.7E-16 118.3 11.2 128 71-201 44-202 (259)
196 3k6r_A Putative transferase PH 99.3 2.9E-11 9.8E-16 116.2 13.2 127 334-484 124-255 (278)
197 3thr_A Glycine N-methyltransfe 99.3 3.9E-12 1.3E-16 124.4 7.2 103 40-152 26-136 (293)
198 3i9f_A Putative type 11 methyl 99.3 3.2E-12 1.1E-16 114.3 5.9 113 72-199 14-147 (170)
199 3ofk_A Nodulation protein S; N 99.3 7.6E-12 2.6E-16 116.5 8.7 75 70-152 46-120 (216)
200 3g5t_A Trans-aconitate 3-methy 99.3 3.4E-12 1.2E-16 125.3 6.6 75 74-152 35-119 (299)
201 2vdw_A Vaccinia virus capping 99.3 1.4E-11 4.7E-16 120.8 10.8 78 74-152 47-135 (302)
202 3iv6_A Putative Zn-dependent a 99.3 3.2E-11 1.1E-15 115.0 13.0 113 325-461 35-150 (261)
203 1wy7_A Hypothetical protein PH 99.3 1E-10 3.6E-15 108.0 16.2 126 333-485 47-174 (207)
204 4dzr_A Protein-(glutamine-N5) 99.3 1.2E-12 4.2E-17 121.4 3.2 144 321-485 15-191 (215)
205 3hem_A Cyclopropane-fatty-acyl 99.3 1.2E-11 4.2E-16 121.5 10.5 75 70-152 67-143 (302)
206 1kpg_A CFA synthase;, cyclopro 99.3 2.3E-11 7.7E-16 118.6 12.2 75 70-152 59-135 (287)
207 2vdw_A Vaccinia virus capping 99.3 2.8E-11 9.6E-16 118.6 12.9 137 316-461 28-171 (302)
208 2fca_A TRNA (guanine-N(7)-)-me 99.3 6.8E-11 2.3E-15 109.9 14.8 132 335-485 38-178 (213)
209 3gwz_A MMCR; methyltransferase 99.3 1E-10 3.5E-15 118.2 17.0 132 332-485 199-355 (369)
210 2gs9_A Hypothetical protein TT 99.3 5.7E-11 2E-15 110.1 13.9 108 325-462 28-135 (211)
211 1vlm_A SAM-dependent methyltra 99.3 3.7E-11 1.3E-15 112.2 12.6 118 336-485 48-187 (219)
212 1o54_A SAM-dependent O-methylt 99.3 3.6E-11 1.2E-15 116.6 13.0 130 331-486 108-239 (277)
213 4dzr_A Protein-(glutamine-N5) 99.3 1.2E-12 3.9E-17 121.6 2.3 119 74-197 29-189 (215)
214 3ckk_A TRNA (guanine-N(7)-)-me 99.3 9.1E-12 3.1E-16 117.6 8.4 117 74-191 45-185 (235)
215 3i53_A O-methyltransferase; CO 99.3 1.2E-10 4E-15 116.1 16.9 132 333-486 167-321 (332)
216 2aot_A HMT, histamine N-methyl 99.2 4E-11 1.4E-15 117.2 13.1 133 334-483 51-218 (292)
217 3bxo_A N,N-dimethyltransferase 99.2 2.7E-11 9.4E-16 114.4 11.6 108 322-458 29-140 (239)
218 3orh_A Guanidinoacetate N-meth 99.2 7E-12 2.4E-16 118.6 7.4 146 314-483 42-207 (236)
219 1g6q_1 HnRNP arginine N-methyl 99.2 2E-11 6.8E-16 121.3 11.0 112 325-456 28-142 (328)
220 1qzz_A RDMB, aclacinomycin-10- 99.2 9.1E-11 3.1E-15 118.9 16.0 133 332-486 179-339 (374)
221 3g2m_A PCZA361.24; SAM-depende 99.2 3.2E-11 1.1E-15 118.3 12.3 107 335-460 82-191 (299)
222 2pwy_A TRNA (adenine-N(1)-)-me 99.2 3.3E-11 1.1E-15 115.4 11.7 129 331-485 92-223 (258)
223 2pwy_A TRNA (adenine-N(1)-)-me 99.2 6.9E-11 2.4E-15 113.1 13.9 121 70-199 91-223 (258)
224 3hp7_A Hemolysin, putative; st 99.2 3.5E-11 1.2E-15 116.0 11.5 145 318-486 68-232 (291)
225 2ipx_A RRNA 2'-O-methyltransfe 99.2 5.5E-11 1.9E-15 112.1 12.7 135 330-485 72-216 (233)
226 1zx0_A Guanidinoacetate N-meth 99.2 5E-12 1.7E-16 119.6 5.4 127 335-480 60-204 (236)
227 2b3t_A Protein methyltransfera 99.2 1.4E-11 4.9E-16 119.4 8.6 119 74-197 108-260 (276)
228 1x19_A CRTF-related protein; m 99.2 1.6E-10 5.6E-15 116.3 16.4 131 333-485 188-347 (359)
229 2frn_A Hypothetical protein PH 99.2 1.4E-10 4.8E-15 112.4 15.3 113 74-197 124-254 (278)
230 1nt2_A Fibrillarin-like PRE-rR 99.2 3.4E-11 1.2E-15 111.7 10.4 123 72-198 54-193 (210)
231 2fk8_A Methoxy mycolic acid sy 99.2 2.7E-11 9.1E-16 120.0 10.1 75 70-152 85-161 (318)
232 2avn_A Ubiquinone/menaquinone 99.2 1.1E-11 3.9E-16 118.9 7.2 67 75-152 54-120 (260)
233 2y1w_A Histone-arginine methyl 99.2 4.9E-11 1.7E-15 119.5 11.8 115 323-458 38-154 (348)
234 2nxc_A L11 mtase, ribosomal pr 99.2 1.4E-11 4.9E-16 117.8 7.5 113 74-198 119-242 (254)
235 4e2x_A TCAB9; kijanose, tetron 99.2 6.4E-11 2.2E-15 121.8 12.9 142 321-485 93-252 (416)
236 1ws6_A Methyltransferase; stru 99.2 3.8E-11 1.3E-15 107.1 9.8 108 335-462 41-150 (171)
237 1nt2_A Fibrillarin-like PRE-rR 99.2 2.2E-10 7.6E-15 106.1 15.2 132 333-486 55-195 (210)
238 3fpf_A Mtnas, putative unchara 99.2 1.3E-10 4.6E-15 111.8 14.1 106 331-461 118-224 (298)
239 2r3s_A Uncharacterized protein 99.2 9.8E-11 3.3E-15 116.7 13.7 132 334-486 164-323 (335)
240 3fzg_A 16S rRNA methylase; met 99.2 6.4E-12 2.2E-16 112.0 4.4 106 335-463 49-155 (200)
241 1wxx_A TT1595, hypothetical pr 99.2 3.5E-10 1.2E-14 114.7 18.0 170 285-483 171-353 (382)
242 3dxy_A TRNA (guanine-N(7)-)-me 99.2 8E-11 2.7E-15 109.8 12.1 128 335-481 34-172 (218)
243 1wzn_A SAM-dependent methyltra 99.2 2.5E-10 8.4E-15 108.9 15.8 102 334-458 40-144 (252)
244 1yb2_A Hypothetical protein TA 99.2 3.9E-11 1.3E-15 116.2 10.3 119 71-199 106-236 (275)
245 3fpf_A Mtnas, putative unchara 99.2 3.5E-11 1.2E-15 115.8 9.6 77 70-152 117-194 (298)
246 1tw3_A COMT, carminomycin 4-O- 99.2 1.2E-10 4E-15 117.4 13.9 132 333-486 181-339 (360)
247 3dp7_A SAM-dependent methyltra 99.2 1.4E-10 4.9E-15 116.9 14.4 133 335-486 179-342 (363)
248 2yxd_A Probable cobalt-precorr 99.2 6.8E-11 2.3E-15 106.6 10.8 123 69-200 29-157 (183)
249 3id6_C Fibrillarin-like rRNA/T 99.2 3.9E-10 1.3E-14 105.5 16.0 142 323-485 61-215 (232)
250 2ipx_A RRNA 2'-O-methyltransfe 99.2 1.8E-11 6.1E-16 115.6 6.9 121 73-197 75-214 (233)
251 3gwz_A MMCR; methyltransferase 99.2 1.1E-10 3.9E-15 117.9 13.2 122 71-199 198-355 (369)
252 3lbf_A Protein-L-isoaspartate 99.2 8.7E-11 3E-15 108.8 11.4 104 331-461 73-176 (210)
253 3dp7_A SAM-dependent methyltra 99.2 2.7E-11 9.1E-16 122.3 8.4 75 74-152 178-254 (363)
254 3mb5_A SAM-dependent methyltra 99.2 4.6E-11 1.6E-15 114.2 9.6 119 70-198 88-220 (255)
255 3gdh_A Trimethylguanosine synt 99.2 1.5E-11 5.3E-16 116.5 6.2 72 74-152 77-150 (241)
256 3opn_A Putative hemolysin; str 99.2 2.2E-11 7.4E-16 114.7 7.0 145 318-486 20-184 (232)
257 2ip2_A Probable phenazine-spec 99.2 1.7E-10 5.9E-15 114.9 13.7 128 337-486 169-322 (334)
258 4e2x_A TCAB9; kijanose, tetron 99.2 1.7E-11 5.8E-16 126.1 6.4 120 70-199 102-252 (416)
259 2ozv_A Hypothetical protein AT 99.2 1.3E-10 4.5E-15 111.5 12.1 129 70-199 31-193 (260)
260 3q87_B N6 adenine specific DNA 99.2 1.1E-10 3.7E-15 104.4 10.8 107 74-199 22-148 (170)
261 1ej0_A FTSJ; methyltransferase 99.2 2.1E-10 7.3E-15 102.6 12.7 141 319-485 6-160 (180)
262 2r3s_A Uncharacterized protein 99.2 1.5E-10 5.2E-15 115.3 12.9 119 74-198 164-321 (335)
263 3mcz_A O-methyltransferase; ad 99.2 2.3E-10 7.8E-15 114.9 14.2 133 332-483 175-336 (352)
264 2pxx_A Uncharacterized protein 99.2 5.2E-11 1.8E-15 110.4 8.7 116 322-461 31-161 (215)
265 3i53_A O-methyltransferase; CO 99.2 5.3E-11 1.8E-15 118.6 9.3 119 74-199 168-320 (332)
266 1jsx_A Glucose-inhibited divis 99.2 1E-10 3.5E-15 108.0 10.7 121 335-484 65-186 (207)
267 3tm4_A TRNA (guanine N2-)-meth 99.2 8.6E-10 2.9E-14 111.5 17.8 126 333-484 215-350 (373)
268 1o54_A SAM-dependent O-methylt 99.2 1.1E-10 3.8E-15 113.1 10.8 118 71-198 108-237 (277)
269 3id6_C Fibrillarin-like rRNA/T 99.2 1.4E-10 4.7E-15 108.6 10.9 124 73-198 74-214 (232)
270 3tm4_A TRNA (guanine N2-)-meth 99.1 8.6E-11 2.9E-15 118.8 10.2 121 73-198 215-350 (373)
271 2yvl_A TRMI protein, hypotheti 99.1 3.1E-10 1.1E-14 107.8 13.6 128 331-485 87-214 (248)
272 1ixk_A Methyltransferase; open 99.1 2.9E-10 1E-14 112.1 13.7 141 319-483 106-272 (315)
273 2pjd_A Ribosomal RNA small sub 99.1 1E-10 3.4E-15 117.1 10.4 104 335-461 196-305 (343)
274 3gdh_A Trimethylguanosine synt 99.1 8.6E-12 2.9E-16 118.3 2.5 123 335-478 78-211 (241)
275 3duw_A OMT, O-methyltransferas 99.1 1.1E-10 3.7E-15 109.3 9.9 112 334-462 57-170 (223)
276 3ntv_A MW1564 protein; rossman 99.1 1.1E-10 3.7E-15 110.1 9.9 107 334-460 70-177 (232)
277 3iv6_A Putative Zn-dependent a 99.1 7E-11 2.4E-15 112.6 8.6 78 68-152 38-116 (261)
278 3u81_A Catechol O-methyltransf 99.1 7.1E-11 2.4E-15 110.4 8.5 131 335-481 58-192 (221)
279 1nv8_A HEMK protein; class I a 99.1 1E-10 3.6E-15 113.6 9.7 105 335-460 123-250 (284)
280 1g8a_A Fibrillarin-like PRE-rR 99.1 6.9E-10 2.4E-14 104.1 15.1 132 332-485 70-211 (227)
281 1l3i_A Precorrin-6Y methyltran 99.1 1.2E-10 4E-15 105.8 9.5 121 70-197 28-157 (192)
282 2as0_A Hypothetical protein PH 99.1 1.7E-10 5.7E-15 117.8 11.6 135 335-484 217-364 (396)
283 2yx1_A Hypothetical protein MJ 99.1 2.4E-10 8.1E-15 113.9 12.3 119 335-483 195-314 (336)
284 2zfu_A Nucleomethylin, cerebra 99.1 2.1E-10 7.2E-15 106.6 10.9 120 323-485 58-178 (215)
285 3b3j_A Histone-arginine methyl 99.1 5E-11 1.7E-15 124.1 7.3 116 322-458 145-262 (480)
286 1p91_A Ribosomal RNA large sub 99.1 2.5E-10 8.5E-15 110.0 11.6 71 74-152 84-154 (269)
287 3a27_A TYW2, uncharacterized p 99.1 3.8E-10 1.3E-14 108.9 12.7 105 333-462 117-222 (272)
288 1ne2_A Hypothetical protein TA 99.1 5.1E-10 1.7E-14 102.8 13.0 117 334-484 50-168 (200)
289 1o9g_A RRNA methyltransferase; 99.1 1.2E-10 4.2E-15 111.0 9.1 115 335-461 51-216 (250)
290 3dr5_A Putative O-methyltransf 99.1 4.6E-10 1.6E-14 104.9 12.7 108 335-461 56-165 (221)
291 2h00_A Methyltransferase 10 do 99.1 1.7E-09 5.7E-14 103.3 17.0 84 335-425 65-152 (254)
292 3mti_A RRNA methylase; SAM-dep 99.1 9E-11 3.1E-15 106.3 7.7 74 74-152 21-95 (185)
293 3tfw_A Putative O-methyltransf 99.1 1.8E-10 6.3E-15 109.7 10.1 109 334-462 62-173 (248)
294 3mq2_A 16S rRNA methyltransfer 99.1 1.8E-10 6.1E-15 107.3 9.8 135 334-485 26-183 (218)
295 3tma_A Methyltransferase; thum 99.1 4.6E-10 1.6E-14 112.8 13.4 138 322-485 190-338 (354)
296 1qzz_A RDMB, aclacinomycin-10- 99.1 2.7E-10 9.3E-15 115.4 11.8 123 71-200 178-339 (374)
297 2vdv_E TRNA (guanine-N(7)-)-me 99.1 1.1E-10 3.6E-15 111.2 7.9 118 74-192 48-191 (246)
298 3fzg_A 16S rRNA methylase; met 99.1 7.9E-11 2.7E-15 105.0 6.3 74 74-152 48-121 (200)
299 2zfu_A Nucleomethylin, cerebra 99.1 1.5E-10 5E-15 107.7 8.5 101 74-197 66-176 (215)
300 3bwc_A Spermidine synthase; SA 99.1 3.1E-10 1E-14 111.4 11.1 137 335-486 95-240 (304)
301 1i9g_A Hypothetical protein RV 99.1 3.4E-10 1.2E-14 109.7 11.4 129 332-485 96-229 (280)
302 1x19_A CRTF-related protein; m 99.1 2.1E-10 7.3E-15 115.5 10.2 123 70-199 185-347 (359)
303 3lbf_A Protein-L-isoaspartate 99.1 2.1E-10 7.1E-15 106.2 9.3 81 66-152 68-149 (210)
304 1af7_A Chemotaxis receptor met 99.1 2.2E-10 7.4E-15 110.2 9.6 106 43-152 70-219 (274)
305 2qm3_A Predicted methyltransfe 99.1 8.6E-10 2.9E-14 111.5 14.5 131 334-484 171-307 (373)
306 1dus_A MJ0882; hypothetical pr 99.1 2.9E-10 1E-14 103.3 10.0 121 66-194 43-176 (194)
307 1g8a_A Fibrillarin-like PRE-rR 99.1 4.6E-10 1.6E-14 105.3 11.5 117 73-198 71-210 (227)
308 3dou_A Ribosomal RNA large sub 99.1 8.3E-10 2.8E-14 100.6 12.7 144 319-489 9-167 (191)
309 2yxe_A Protein-L-isoaspartate 99.1 3.6E-10 1.2E-14 105.0 10.5 105 332-462 74-180 (215)
310 4azs_A Methyltransferase WBDD; 99.1 6.9E-11 2.4E-15 126.2 6.3 75 74-152 65-140 (569)
311 3htx_A HEN1; HEN1, small RNA m 99.1 6.1E-10 2.1E-14 119.3 13.2 111 334-461 720-836 (950)
312 4a6d_A Hydroxyindole O-methylt 99.1 2.1E-09 7.1E-14 107.9 16.6 140 325-487 169-335 (353)
313 1i9g_A Hypothetical protein RV 99.1 2.6E-10 8.9E-15 110.6 9.7 119 70-197 94-227 (280)
314 3ntv_A MW1564 protein; rossman 99.1 9.2E-11 3.1E-15 110.6 6.2 76 74-152 70-148 (232)
315 1vbf_A 231AA long hypothetical 99.1 4.5E-10 1.6E-14 105.5 11.0 102 332-462 67-168 (231)
316 3bwc_A Spermidine synthase; SA 99.1 1E-10 3.5E-15 114.8 6.7 123 74-198 94-238 (304)
317 3mcz_A O-methyltransferase; ad 99.1 2.6E-10 9E-15 114.4 9.9 118 76-197 180-336 (352)
318 2avn_A Ubiquinone/menaquinone 99.1 2.6E-10 8.8E-15 109.4 9.4 110 323-461 44-154 (260)
319 3tr6_A O-methyltransferase; ce 99.1 2E-10 7E-15 107.5 8.2 108 334-461 63-176 (225)
320 3opn_A Putative hemolysin; str 99.1 2E-11 6.7E-16 115.0 1.2 119 74-199 36-183 (232)
321 2ip2_A Probable phenazine-spec 99.1 5.6E-10 1.9E-14 111.2 11.8 120 72-199 165-321 (334)
322 1tw3_A COMT, carminomycin 4-O- 99.1 5E-10 1.7E-14 112.8 11.5 123 71-200 179-339 (360)
323 2b25_A Hypothetical protein; s 99.1 7.8E-10 2.7E-14 110.3 12.7 155 70-246 100-278 (336)
324 2gs9_A Hypothetical protein TT 99.1 7E-11 2.4E-15 109.5 4.6 65 75-152 36-101 (211)
325 1dl5_A Protein-L-isoaspartate 99.1 5.9E-10 2E-14 110.2 11.3 110 326-461 66-177 (317)
326 3uwp_A Histone-lysine N-methyl 99.1 3.7E-10 1.3E-14 112.7 9.7 113 332-461 170-290 (438)
327 3bgv_A MRNA CAP guanine-N7 met 99.1 1.8E-09 6E-14 106.6 14.6 77 75-152 34-120 (313)
328 3bgv_A MRNA CAP guanine-N7 met 99.1 2.7E-10 9.2E-15 112.4 8.5 114 335-460 34-156 (313)
329 2qe6_A Uncharacterized protein 99.0 3.6E-10 1.2E-14 109.2 9.2 78 74-152 76-163 (274)
330 3lst_A CALO1 methyltransferase 99.0 3.2E-10 1.1E-14 113.7 9.1 119 71-199 180-335 (348)
331 1sui_A Caffeoyl-COA O-methyltr 99.0 7.8E-10 2.7E-14 105.1 11.3 106 335-460 79-191 (247)
332 1vbf_A 231AA long hypothetical 99.0 4.3E-10 1.5E-14 105.7 9.1 79 67-152 62-140 (231)
333 1uwv_A 23S rRNA (uracil-5-)-me 99.0 2.1E-09 7E-14 110.8 14.9 143 320-485 271-413 (433)
334 4dcm_A Ribosomal RNA large sub 99.0 2.3E-10 7.9E-15 115.5 7.6 80 68-152 215-298 (375)
335 1u2z_A Histone-lysine N-methyl 99.0 8.1E-10 2.8E-14 112.5 11.6 112 332-459 239-359 (433)
336 1wy7_A Hypothetical protein PH 99.0 1.5E-09 5.2E-14 100.1 12.5 116 73-198 47-173 (207)
337 2gpy_A O-methyltransferase; st 99.0 4.6E-10 1.6E-14 105.8 9.0 106 334-459 53-160 (233)
338 2b25_A Hypothetical protein; s 99.0 9.4E-10 3.2E-14 109.7 11.7 133 332-484 102-245 (336)
339 3tma_A Methyltransferase; thum 99.0 2.5E-10 8.4E-15 114.8 7.4 122 71-197 199-336 (354)
340 3ajd_A Putative methyltransfer 99.0 1.1E-09 3.9E-14 105.8 11.8 134 334-483 82-238 (274)
341 3lst_A CALO1 methyltransferase 99.0 7.7E-10 2.6E-14 110.9 10.9 129 332-485 181-335 (348)
342 3eey_A Putative rRNA methylase 99.0 2.9E-10 9.9E-15 104.1 7.0 76 74-152 21-99 (197)
343 3dmg_A Probable ribosomal RNA 99.0 3.8E-10 1.3E-14 114.0 8.3 73 74-152 232-304 (381)
344 3dr5_A Putative O-methyltransf 99.0 1.9E-10 6.5E-15 107.5 5.7 76 75-152 56-135 (221)
345 3reo_A (ISO)eugenol O-methyltr 99.0 8.4E-10 2.9E-14 111.4 10.5 115 73-200 201-355 (368)
346 3m4x_A NOL1/NOP2/SUN family pr 99.0 1.5E-09 5.2E-14 111.5 12.4 143 318-483 92-260 (456)
347 2vdv_E TRNA (guanine-N(7)-)-me 99.0 3.1E-09 1E-13 101.0 13.7 131 334-478 48-191 (246)
348 3ckk_A TRNA (guanine-N(7)-)-me 99.0 2.5E-09 8.7E-14 100.7 12.9 132 335-480 46-189 (235)
349 3p2e_A 16S rRNA methylase; met 99.0 4.9E-10 1.7E-14 105.0 7.8 129 335-485 24-184 (225)
350 3adn_A Spermidine synthase; am 99.0 1.5E-09 5.3E-14 105.6 11.6 133 335-483 83-224 (294)
351 1jg1_A PIMT;, protein-L-isoasp 99.0 1.1E-09 3.7E-14 103.3 10.2 105 332-462 88-192 (235)
352 3q7e_A Protein arginine N-meth 99.0 3.2E-10 1.1E-14 113.6 6.7 73 74-152 65-139 (349)
353 1ixk_A Methyltransferase; open 99.0 4.1E-10 1.4E-14 111.1 7.3 124 70-197 113-272 (315)
354 1i1n_A Protein-L-isoaspartate 99.0 7.7E-10 2.6E-14 103.6 8.7 76 73-152 75-157 (226)
355 2hnk_A SAM-dependent O-methylt 99.0 4.4E-10 1.5E-14 106.3 7.0 110 334-460 59-182 (239)
356 3r3h_A O-methyltransferase, SA 99.0 1.2E-10 4.3E-15 110.3 3.1 108 334-461 59-172 (242)
357 3c3p_A Methyltransferase; NP_9 99.0 8.2E-10 2.8E-14 102.2 8.6 104 335-460 56-161 (210)
358 3p9c_A Caffeic acid O-methyltr 99.0 1.3E-09 4.3E-14 109.9 10.5 115 73-200 199-353 (364)
359 2pbf_A Protein-L-isoaspartate 99.0 1.8E-09 6.1E-14 101.2 10.8 111 333-461 78-195 (227)
360 4a6d_A Hydroxyindole O-methylt 99.0 2.9E-09 9.8E-14 106.8 12.9 121 72-199 176-333 (353)
361 2esr_A Methyltransferase; stru 99.0 5.3E-10 1.8E-14 100.4 6.8 75 74-152 30-106 (177)
362 1dl5_A Protein-L-isoaspartate 99.0 7.6E-10 2.6E-14 109.4 8.4 84 65-152 65-150 (317)
363 3p9n_A Possible methyltransfer 99.0 7E-10 2.4E-14 100.9 7.5 76 74-152 43-119 (189)
364 2avd_A Catechol-O-methyltransf 99.0 1.7E-09 5.7E-14 101.5 10.4 108 334-461 68-181 (229)
365 2yxe_A Protein-L-isoaspartate 99.0 8.3E-10 2.8E-14 102.5 8.0 81 68-152 70-152 (215)
366 3gru_A Dimethyladenosine trans 99.0 1E-09 3.5E-14 106.5 8.7 90 55-152 31-120 (295)
367 3hp7_A Hemolysin, putative; st 99.0 7.2E-10 2.4E-14 106.9 7.5 117 74-198 84-230 (291)
368 3m6w_A RRNA methylase; rRNA me 99.0 2.7E-09 9.2E-14 109.8 12.3 143 318-484 88-257 (464)
369 1iy9_A Spermidine synthase; ro 99.0 4.9E-09 1.7E-13 101.2 13.4 131 335-484 75-216 (275)
370 1i1n_A Protein-L-isoaspartate 99.0 2E-09 6.9E-14 100.7 10.4 107 333-461 75-184 (226)
371 3uwp_A Histone-lysine N-methyl 99.0 7.2E-10 2.4E-14 110.7 7.5 79 70-152 168-258 (438)
372 3tqs_A Ribosomal RNA small sub 99.0 2.2E-09 7.5E-14 102.2 10.5 91 56-150 11-101 (255)
373 3c3y_A Pfomt, O-methyltransfer 99.0 1.7E-09 5.8E-14 102.2 9.8 109 335-460 70-182 (237)
374 2bm8_A Cephalosporin hydroxyla 99.0 2.7E-10 9.1E-15 107.6 4.0 115 75-194 81-213 (236)
375 3adn_A Spermidine synthase; am 99.0 4.4E-10 1.5E-14 109.4 5.6 76 74-152 82-163 (294)
376 2pbf_A Protein-L-isoaspartate 99.0 9.9E-10 3.4E-14 102.9 7.9 76 73-152 78-168 (227)
377 3htx_A HEN1; HEN1, small RNA m 99.0 1.1E-09 3.6E-14 117.4 8.9 78 71-152 717-802 (950)
378 1m6y_A S-adenosyl-methyltransf 98.9 8.7E-10 3E-14 107.4 7.5 91 62-152 13-104 (301)
379 2plw_A Ribosomal RNA methyltra 98.9 1.1E-08 3.6E-13 93.8 14.5 141 319-485 6-178 (201)
380 2ift_A Putative methylase HI07 98.9 6.4E-10 2.2E-14 102.3 6.2 75 75-152 53-131 (201)
381 3axs_A Probable N(2),N(2)-dime 98.9 2.2E-09 7.6E-14 108.1 10.6 125 335-481 52-181 (392)
382 2fpo_A Methylase YHHF; structu 98.9 6.9E-10 2.4E-14 102.2 6.4 74 75-152 54-128 (202)
383 3k6r_A Putative transferase PH 98.9 7.9E-09 2.7E-13 99.2 13.9 114 74-198 124-255 (278)
384 3bzb_A Uncharacterized protein 98.9 1.5E-09 5.1E-14 105.3 9.0 123 74-197 78-234 (281)
385 2qe6_A Uncharacterized protein 98.9 4.7E-09 1.6E-13 101.3 12.3 113 335-462 77-199 (274)
386 2yvl_A TRMI protein, hypotheti 98.9 3.4E-09 1.2E-13 100.5 11.1 115 71-197 87-212 (248)
387 1fp2_A Isoflavone O-methyltran 98.9 1.7E-09 5.9E-14 108.5 9.4 113 74-199 187-340 (352)
388 3a27_A TYW2, uncharacterized p 98.9 2.6E-09 8.7E-14 103.1 10.2 75 73-152 117-192 (272)
389 2pt6_A Spermidine synthase; tr 98.9 3.2E-09 1.1E-13 104.8 11.1 132 335-484 116-257 (321)
390 2fyt_A Protein arginine N-meth 98.9 2.3E-09 8E-14 106.8 10.1 74 73-152 62-137 (340)
391 2qm3_A Predicted methyltransfe 98.9 2.7E-09 9.2E-14 107.9 10.7 115 74-198 171-307 (373)
392 2h00_A Methyltransferase 10 do 98.9 1.6E-09 5.5E-14 103.4 8.6 77 75-152 65-146 (254)
393 3u81_A Catechol O-methyltransf 98.9 7.6E-10 2.6E-14 103.4 6.0 120 74-193 57-190 (221)
394 3tfw_A Putative O-methyltransf 98.9 5.4E-10 1.9E-14 106.4 4.9 78 74-152 62-142 (248)
395 1fp1_D Isoliquiritigenin 2'-O- 98.9 4.4E-09 1.5E-13 106.3 11.7 113 74-199 208-359 (372)
396 3cbg_A O-methyltransferase; cy 98.9 2.4E-09 8.1E-14 100.8 9.0 107 335-461 72-184 (232)
397 1af7_A Chemotaxis receptor met 98.9 8.5E-10 2.9E-14 106.0 5.9 111 335-461 105-254 (274)
398 2nyu_A Putative ribosomal RNA 98.9 1.1E-08 3.7E-13 93.3 13.0 140 320-485 7-169 (196)
399 2yxl_A PH0851 protein, 450AA l 98.9 7.3E-09 2.5E-13 107.3 13.3 145 318-484 246-417 (450)
400 2pjd_A Ribosomal RNA small sub 98.9 6E-10 2E-14 111.4 4.9 78 69-152 190-267 (343)
401 3lcv_B Sisomicin-gentamicin re 98.9 3.9E-09 1.3E-13 98.4 9.7 127 335-485 132-271 (281)
402 2gpy_A O-methyltransferase; st 98.9 6.9E-10 2.3E-14 104.5 4.4 78 74-152 53-132 (233)
403 3gjy_A Spermidine synthase; AP 98.9 7.9E-10 2.7E-14 107.8 4.9 75 76-152 90-165 (317)
404 2jjq_A Uncharacterized RNA met 98.9 4.5E-08 1.5E-12 100.2 18.1 114 318-461 276-389 (425)
405 1zq9_A Probable dimethyladenos 98.9 5.1E-09 1.8E-13 101.6 10.5 79 66-152 19-99 (285)
406 3duw_A OMT, O-methyltransferas 98.9 6.1E-10 2.1E-14 104.1 3.6 77 74-152 57-139 (223)
407 2igt_A SAM dependent methyltra 98.9 3.1E-09 1.1E-13 105.3 8.8 120 74-195 152-299 (332)
408 3giw_A Protein of unknown func 98.9 2.3E-09 8E-14 101.9 7.5 77 60-136 63-143 (277)
409 2fhp_A Methylase, putative; al 98.9 1.2E-09 4E-14 98.9 5.2 78 74-152 43-122 (187)
410 1ne2_A Hypothetical protein TA 98.9 3.1E-09 1.1E-13 97.4 8.2 68 73-152 49-116 (200)
411 3reo_A (ISO)eugenol O-methyltr 98.9 1.3E-08 4.5E-13 102.6 13.4 123 333-485 201-354 (368)
412 1r18_A Protein-L-isoaspartate( 98.9 4.2E-09 1.4E-13 98.7 9.1 107 333-461 82-196 (227)
413 1jg1_A PIMT;, protein-L-isoasp 98.9 2.2E-09 7.4E-14 101.3 7.2 81 66-152 82-164 (235)
414 3tr6_A O-methyltransferase; ce 98.9 6.7E-10 2.3E-14 103.9 3.5 79 74-152 63-146 (225)
415 3lcv_B Sisomicin-gentamicin re 98.9 3.9E-09 1.3E-13 98.5 8.5 74 74-152 131-204 (281)
416 1uwv_A 23S rRNA (uracil-5-)-me 98.9 9.6E-09 3.3E-13 105.8 12.3 82 69-152 280-362 (433)
417 3frh_A 16S rRNA methylase; met 98.9 6.7E-09 2.3E-13 96.0 9.7 71 74-152 104-174 (253)
418 2i7c_A Spermidine synthase; tr 98.9 4.4E-09 1.5E-13 102.0 9.0 133 335-483 78-218 (283)
419 3bt7_A TRNA (uracil-5-)-methyl 98.9 1.9E-08 6.5E-13 101.4 14.0 72 319-396 198-269 (369)
420 1fp2_A Isoflavone O-methyltran 98.9 7.6E-09 2.6E-13 103.8 11.0 122 334-485 187-340 (352)
421 3c3p_A Methyltransferase; NP_9 98.9 1E-09 3.6E-14 101.5 4.3 75 74-152 55-132 (210)
422 1xj5_A Spermidine synthase 1; 98.9 4.4E-09 1.5E-13 104.1 9.1 111 335-461 120-237 (334)
423 1ws6_A Methyltransferase; stru 98.9 7.7E-10 2.6E-14 98.5 3.1 76 75-152 41-116 (171)
424 1fp1_D Isoliquiritigenin 2'-O- 98.9 8.9E-09 3E-13 104.1 11.3 123 333-485 207-359 (372)
425 1sui_A Caffeoyl-COA O-methyltr 98.8 1E-09 3.4E-14 104.4 3.8 77 74-152 78-162 (247)
426 1inl_A Spermidine synthase; be 98.8 1.3E-08 4.6E-13 99.2 11.7 130 335-483 90-231 (296)
427 2h1r_A Dimethyladenosine trans 98.8 5.5E-09 1.9E-13 102.1 8.9 78 67-152 34-112 (299)
428 1nv8_A HEMK protein; class I a 98.8 3.3E-09 1.1E-13 102.9 7.2 71 75-152 123-198 (284)
429 3sso_A Methyltransferase; macr 98.8 2E-09 6.9E-14 107.2 5.4 67 74-152 215-294 (419)
430 2frx_A Hypothetical protein YE 98.8 2.2E-08 7.6E-13 103.9 13.5 139 318-477 102-266 (479)
431 1ej0_A FTSJ; methyltransferase 98.8 7.9E-09 2.7E-13 92.2 8.7 113 74-197 21-158 (180)
432 1p91_A Ribosomal RNA large sub 98.8 7E-09 2.4E-13 99.8 8.9 108 322-462 73-181 (269)
433 1mjf_A Spermidine synthase; sp 98.8 3.2E-08 1.1E-12 95.9 13.4 130 335-483 75-219 (281)
434 3r0q_C Probable protein argini 98.8 7.6E-09 2.6E-13 104.6 9.3 74 72-152 60-135 (376)
435 3p9c_A Caffeic acid O-methyltr 98.8 2.3E-08 8E-13 100.6 12.8 130 326-485 192-352 (364)
436 3frh_A 16S rRNA methylase; met 98.8 1.5E-08 5E-13 93.8 10.2 103 335-463 105-209 (253)
437 4hc4_A Protein arginine N-meth 98.8 6.2E-09 2.1E-13 104.2 8.4 71 75-152 83-155 (376)
438 3r3h_A O-methyltransferase, SA 98.8 3E-10 1E-14 107.7 -1.1 77 74-152 59-142 (242)
439 3fut_A Dimethyladenosine trans 98.8 8.6E-09 2.9E-13 98.8 8.6 89 55-152 28-116 (271)
440 1r18_A Protein-L-isoaspartate( 98.8 3.6E-09 1.2E-13 99.1 5.9 75 73-152 82-169 (227)
441 2y1w_A Histone-arginine methyl 98.8 1.8E-08 6.3E-13 100.7 11.4 75 71-152 46-122 (348)
442 2dul_A N(2),N(2)-dimethylguano 98.8 2.1E-08 7.2E-13 101.0 11.7 102 335-459 47-164 (378)
443 3gjy_A Spermidine synthase; AP 98.8 5.3E-08 1.8E-12 94.9 14.2 128 337-484 91-226 (317)
444 1qam_A ERMC' methyltransferase 98.8 1.9E-08 6.4E-13 95.4 10.6 88 56-151 12-100 (244)
445 2yx1_A Hypothetical protein MJ 98.8 8.6E-09 3E-13 102.5 8.5 113 74-198 194-315 (336)
446 1sqg_A SUN protein, FMU protei 98.8 4.6E-08 1.6E-12 100.7 14.1 142 318-482 233-400 (429)
447 1xj5_A Spermidine synthase 1; 98.8 6.5E-09 2.2E-13 102.9 7.2 78 73-152 118-200 (334)
448 1g6q_1 HnRNP arginine N-methyl 98.8 1E-08 3.5E-13 101.7 8.7 73 74-152 37-111 (328)
449 2yxl_A PH0851 protein, 450AA l 98.8 1E-08 3.5E-13 106.2 8.8 80 71-152 255-336 (450)
450 3c3y_A Pfomt, O-methyltransfer 98.8 3.2E-09 1.1E-13 100.3 4.5 79 74-152 69-153 (237)
451 2b2c_A Spermidine synthase; be 98.8 1.4E-08 4.8E-13 99.7 9.1 108 335-460 108-223 (314)
452 2ld4_A Anamorsin; methyltransf 98.8 1.2E-08 4.2E-13 91.4 8.0 112 333-481 10-130 (176)
453 1u2z_A Histone-lysine N-methyl 98.8 6.6E-09 2.2E-13 105.8 6.7 84 69-152 236-329 (433)
454 1zg3_A Isoflavanone 4'-O-methy 98.8 2.5E-08 8.5E-13 100.2 10.8 121 335-485 193-346 (358)
455 3uzu_A Ribosomal RNA small sub 98.8 1.7E-08 5.7E-13 97.3 9.0 82 55-140 23-106 (279)
456 1zg3_A Isoflavanone 4'-O-methy 98.8 1.6E-08 5.3E-13 101.7 9.1 112 75-199 193-346 (358)
457 1o9g_A RRNA methyltransferase; 98.8 3.5E-09 1.2E-13 100.8 4.1 47 74-120 50-98 (250)
458 2o07_A Spermidine synthase; st 98.8 7.5E-09 2.6E-13 101.3 6.6 76 74-152 94-174 (304)
459 2o07_A Spermidine synthase; st 98.8 3.8E-08 1.3E-12 96.2 11.5 109 335-461 95-211 (304)
460 2bm8_A Cephalosporin hydroxyla 98.8 1.6E-08 5.6E-13 95.3 8.6 125 335-483 81-216 (236)
461 3m6w_A RRNA methylase; rRNA me 98.7 4.1E-09 1.4E-13 108.4 4.7 80 70-152 96-176 (464)
462 1iy9_A Spermidine synthase; ro 98.7 1.2E-08 4E-13 98.5 7.6 120 74-197 74-215 (275)
463 3ldu_A Putative methylase; str 98.7 2.8E-08 9.5E-13 100.5 10.6 119 323-460 183-345 (385)
464 1uir_A Polyamine aminopropyltr 98.7 2.1E-08 7.3E-13 98.7 9.5 132 335-482 77-221 (314)
465 4azs_A Methyltransferase WBDD; 98.7 8.3E-09 2.9E-13 110.1 6.2 84 335-429 66-150 (569)
466 3cbg_A O-methyltransferase; cy 98.7 6E-09 2.1E-13 98.0 4.3 78 74-152 71-154 (232)
467 2pt6_A Spermidine synthase; tr 98.7 1.1E-08 3.7E-13 101.0 6.3 120 74-197 115-256 (321)
468 2b2c_A Spermidine synthase; be 98.7 1E-08 3.5E-13 100.6 6.1 76 74-152 107-187 (314)
469 3k0b_A Predicted N6-adenine-sp 98.7 4.1E-08 1.4E-12 99.4 10.7 119 323-460 189-351 (393)
470 1uir_A Polyamine aminopropyltr 98.7 1.1E-08 3.7E-13 100.8 6.2 76 74-152 76-157 (314)
471 2oxt_A Nucleoside-2'-O-methylt 98.7 6.5E-09 2.2E-13 99.6 4.5 69 74-152 73-146 (265)
472 3ajd_A Putative methyltransfer 98.7 1.3E-08 4.3E-13 98.4 6.5 83 70-152 78-162 (274)
473 3b3j_A Histone-arginine methyl 98.7 2.6E-08 9E-13 103.5 9.3 72 74-152 157-230 (480)
474 1inl_A Spermidine synthase; be 98.7 1.5E-08 5.1E-13 98.9 6.9 120 74-197 89-231 (296)
475 3v97_A Ribosomal RNA large sub 98.7 9.1E-09 3.1E-13 111.9 5.9 140 74-219 538-700 (703)
476 3ldg_A Putative uncharacterize 98.7 1.3E-07 4.4E-12 95.3 13.9 121 322-460 181-344 (384)
477 3m4x_A NOL1/NOP2/SUN family pr 98.7 7E-09 2.4E-13 106.5 4.7 126 70-198 100-261 (456)
478 3ftd_A Dimethyladenosine trans 98.7 3.6E-08 1.2E-12 93.5 9.0 79 56-139 13-91 (249)
479 1zq9_A Probable dimethyladenos 98.7 3E-08 1E-12 96.2 8.6 86 324-422 17-102 (285)
480 2f8l_A Hypothetical protein LM 98.7 5.5E-08 1.9E-12 97.1 10.7 124 335-480 130-280 (344)
481 3dou_A Ribosomal RNA large sub 98.7 1.9E-08 6.4E-13 91.6 6.5 67 74-152 24-97 (191)
482 2i7c_A Spermidine synthase; tr 98.7 1.9E-08 6.4E-13 97.6 6.7 120 74-197 77-218 (283)
483 2wa2_A Non-structural protein 98.7 1E-08 3.6E-13 98.7 4.8 69 74-152 81-154 (276)
484 2h1r_A Dimethyladenosine trans 98.7 5.1E-08 1.7E-12 95.3 9.6 79 332-425 39-117 (299)
485 2plw_A Ribosomal RNA methyltra 98.7 2.7E-08 9.3E-13 91.1 7.2 112 74-196 21-175 (201)
486 2jjq_A Uncharacterized RNA met 98.7 6.6E-08 2.2E-12 99.0 10.6 115 74-196 289-405 (425)
487 1mjf_A Spermidine synthase; sp 98.7 1.6E-08 5.5E-13 98.0 5.6 74 74-152 74-158 (281)
488 4dmg_A Putative uncharacterize 98.7 1.5E-08 5E-13 102.6 5.3 73 75-152 214-286 (393)
489 2wa2_A Non-structural protein 98.7 3.5E-08 1.2E-12 95.0 7.7 116 318-460 66-194 (276)
490 1yub_A Ermam, rRNA methyltrans 98.7 7.9E-09 2.7E-13 98.1 3.1 78 67-152 21-99 (245)
491 2ld4_A Anamorsin; methyltransf 98.6 3.6E-08 1.2E-12 88.3 7.2 102 73-195 10-130 (176)
492 3gru_A Dimethyladenosine trans 98.6 6.7E-08 2.3E-12 93.7 9.4 87 324-425 39-125 (295)
493 2cmg_A Spermidine synthase; tr 98.6 2.1E-08 7.2E-13 95.9 5.7 128 335-490 72-204 (262)
494 2avd_A Catechol-O-methyltransf 98.6 2E-08 6.7E-13 94.1 5.4 79 74-152 68-151 (229)
495 1qyr_A KSGA, high level kasuga 98.6 2.9E-08 9.9E-13 94.2 6.4 84 66-152 12-96 (252)
496 2ih2_A Modification methylase 98.6 7.9E-08 2.7E-12 98.7 10.0 126 323-478 27-186 (421)
497 2oxt_A Nucleoside-2'-O-methylt 98.6 4.3E-08 1.5E-12 93.9 7.2 116 318-460 58-186 (265)
498 2hnk_A SAM-dependent O-methylt 98.6 3.1E-08 1.1E-12 93.5 6.1 79 74-152 59-153 (239)
499 2r6z_A UPF0341 protein in RSP 98.6 5E-08 1.7E-12 93.0 7.0 81 334-423 82-171 (258)
500 3giw_A Protein of unknown func 98.6 1.3E-07 4.6E-12 89.8 9.6 113 337-463 80-204 (277)
No 1
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.84 E-value=3.4e-20 Score=180.90 Aligned_cols=183 Identities=21% Similarity=0.306 Sum_probs=125.9
Q ss_pred CCcccccchhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcC-ChHHHHHHHHHHHhcCCCCC-C
Q 009871 310 RSTGLMLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDG-DSIALDLLAQNVTANLKPPF-L 387 (523)
Q Consensus 310 ~~~G~~~W~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~-~~~~l~~~~~n~~~n~~~~~-~ 387 (523)
..+|+.+|+++..|++++..+....++++|||||||+|.++..++..++.+|+++|+ ++.+++.+++|+..|..... .
T Consensus 54 ~~~g~~~~~~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~ 133 (281)
T 3bzb_A 54 PLWTSHVWSGARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSS 133 (281)
T ss_dssp --------CHHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC-----
T ss_pred CCCCceeecHHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhccc
Confidence 678999999999999999988766788999999999998888888877669999999 89999999999966533211 1
Q ss_pred -----CceEEEeeecCCCCcchhhhh-hcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCC---C--CcEEE
Q 009871 388 -----AKLITKRLEWGNRDHIEAIKE-ENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLRED---Q--QPAFI 456 (523)
Q Consensus 388 -----~~v~~~~ldw~~~~~~~~~~~-~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~---~--~g~~~ 456 (523)
.++.+..++|++... .+.. +...+||+|+++|++|+...+..+++++.++| + | +|.++
T Consensus 134 ~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~L---------k~~~p~~gG~l~ 202 (281)
T 3bzb_A 134 ETVKRASPKVVPYRWGDSPD--SLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLL---------ALPANDPTAVAL 202 (281)
T ss_dssp -----CCCEEEECCTTSCTH--HHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHB---------CCTTTCTTCEEE
T ss_pred ccCCCCCeEEEEecCCCccH--HHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHh---------cccCCCCCCEEE
Confidence 368888899997421 1111 13568999999999999999999999999999 5 5 99888
Q ss_pred EEEeecCC----ChhHHHHHHHHcC-CEEEEEcCCCCCCCCcchhhcccccCCCCccccC
Q 009871 457 LCHIFRQV----DEPSMLSAATQCG-FRLVDKWPSKNSASPSESIISSWFSENGHEVYLP 511 (523)
Q Consensus 457 l~~~~r~~----~~~~~~~~~~~~g-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (523)
++...++. ....|++.+++.| |++..+..... ...+|+....++.++
T Consensus 203 v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~~~~~~--------~~~~f~~~~~~~~~r 254 (281)
T 3bzb_A 203 VTFTHHRPHLAERDLAFFRLVNADGALIAEPWLSPLQ--------MDPMFPDDPGDVCIR 254 (281)
T ss_dssp EEECC--------CTHHHHHHHHSTTEEEEEEECCC------------------------
T ss_pred EEEEeeecccchhHHHHHHHHHhcCCEEEEEeccccc--------cccccccCCcchhcc
Confidence 77666542 2457889999999 99999866321 123566666666553
No 2
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.79 E-value=4.3e-17 Score=177.38 Aligned_cols=169 Identities=18% Similarity=0.187 Sum_probs=114.9
Q ss_pred EEEEEcCceEEEEEecccccccCCCcccccchhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcC
Q 009871 287 IEVNLRDRSFKIEVLSKEYQHTCRSTGLMLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDG 366 (523)
Q Consensus 287 ~~~~~~~~~~~i~~~~~~~~~~~~~~G~~~W~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~ 366 (523)
..+..+|..+.+... . .-.||... .......++... .+|++|||+|||||+++..+++.++.+|+++|+
T Consensus 502 ~~v~E~g~~~~v~~~--~----~~~tG~f~--d~r~~r~~l~~~---~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~ 570 (703)
T 3v97_A 502 LEVTEYNAHLWVNLT--D----YLDTGLFL--DHRIARRMLGQM---SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDM 570 (703)
T ss_dssp EEEEETTEEEEECSS--S----SSSCSCCG--GGHHHHHHHHHH---CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEES
T ss_pred EEEEECCEEEEEecc--c----cccCCCcc--cHHHHHHHHHHh---cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeC
Confidence 456667766665421 1 12455322 122223333332 378899999999999999888888889999999
Q ss_pred ChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCccEEEEccccCC-----------CCChHHHHHH
Q 009871 367 DSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYI-----------PEAILPLFAT 435 (523)
Q Consensus 367 ~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~-----------~~~~~~l~~~ 435 (523)
|+.+++.+++|++.|++.. .++.+...|..+ .+ ....++||+|++....+. ...+..++..
T Consensus 571 s~~al~~a~~N~~~ngl~~--~~v~~i~~D~~~-----~l-~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~ 642 (703)
T 3v97_A 571 SRTYLEWAERNLRLNGLTG--RAHRLIQADCLA-----WL-REANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKD 642 (703)
T ss_dssp CHHHHHHHHHHHHHTTCCS--TTEEEEESCHHH-----HH-HHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCc--cceEEEecCHHH-----HH-HhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHH
Confidence 9999999999999998752 356665544322 11 223468999998654432 1246678888
Q ss_pred HHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEcC
Q 009871 436 AKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 436 l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
+.++| +|||.++++...+..... .+.+.+.|+++..+..
T Consensus 643 a~~~L---------kpgG~L~~s~~~~~~~~~--~~~l~~~g~~~~~i~~ 681 (703)
T 3v97_A 643 LKRLL---------RAGGTIMFSNNKRGFRMD--LDGLAKLGLKAQEITQ 681 (703)
T ss_dssp HHHHE---------EEEEEEEEEECCTTCCCC--HHHHHHTTEEEEECTT
T ss_pred HHHhc---------CCCcEEEEEECCcccccC--HHHHHHcCCceeeeee
Confidence 89999 679999998877654442 4556678988776655
No 3
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.65 E-value=4.3e-16 Score=150.33 Aligned_cols=161 Identities=14% Similarity=0.137 Sum_probs=111.7
Q ss_pred HhhHHHHHHHHhcccccccc--hhhhHHHHhhhh--cCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHH
Q 009871 40 EAKKYWDLFYKRHQDRFFKD--RHYLDKEWGRYF--SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLV 115 (523)
Q Consensus 40 ~~~~~Wd~~y~~~~~~f~~~--~~~l~~~~~~~~--~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a 115 (523)
+...||+.||+.+...++++ ++|+.+.+.+++ ...++.+|||||||+|.++..++..+. .+|+|+|+|+.|++.|
T Consensus 16 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a 94 (263)
T 2a14_A 16 LPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREEL 94 (263)
T ss_dssp CHHHHHHHHCCCCCSCCHHHHHHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHH
T ss_pred CHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHH
Confidence 35689999999877776665 788988888776 335678999999999998877666631 2699999999999999
Q ss_pred HhccccCC------------------------------CcEE-EEEeeccCCccCCCCCCCceeEEEE------------
Q 009871 116 MTHKDFTE------------------------------TRVS-TFVCDLISDDLSRQISPSSIDIVTM------------ 152 (523)
Q Consensus 116 ~~~~~~~~------------------------------~~v~-~~~~d~~~~~~~~~~~~~~fD~V~~------------ 152 (523)
+++..... .++. ++++|+.+.+...+...++||+|++
T Consensus 95 ~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~ 174 (263)
T 2a14_A 95 EKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLD 174 (263)
T ss_dssp HHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHH
T ss_pred HHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHH
Confidence 87643211 1243 8899998742111123579999999
Q ss_pred ---------ccccccceeeecc------eEEecCCeEE-EeeCHHHHHHHHHhCCCcEEEEEeEe
Q 009871 153 ---------ERLTGKDQKISEN------FYVRGDGTRA-FYFSNDFLTSLFKENGFDVEELGLCC 201 (523)
Q Consensus 153 ---------~~~~~~~~~~~~~------~~~~~~g~~~-~~~~~~~l~~ll~~~Gf~~~~~~~~~ 201 (523)
.+++++++.+.-. .+..+++.+. ++++.+++.++|+++||.++++....
T Consensus 175 ~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 175 AYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 2445555554321 1111211111 23599999999999999998876653
No 4
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.63 E-value=1.7e-15 Score=144.86 Aligned_cols=152 Identities=13% Similarity=0.185 Sum_probs=101.0
Q ss_pred HhhHHHHHHHHhcccccccc--hhhhHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHh
Q 009871 40 EAKKYWDLFYKRHQDRFFKD--RHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMT 117 (523)
Q Consensus 40 ~~~~~Wd~~y~~~~~~f~~~--~~~l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~ 117 (523)
....||+..|+.....|... ...+...+..+....++.+|||+|||+|..+..|+++ +++|+|||+|+.||+.|++
T Consensus 31 ~~~~~Wd~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~ 108 (252)
T 2gb4_A 31 LTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFA 108 (252)
T ss_dssp CCHHHHHHHHHHTCCTTCCTTCCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCcccCCCCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHH
Confidence 34578999888765444321 1223333343333346789999999999999999998 6689999999999999987
Q ss_pred cccc------------------CCCcEEEEEeeccCCccCCCCCC-CceeEEEE---cccccccee---eec-ceEEecC
Q 009871 118 HKDF------------------TETRVSTFVCDLISDDLSRQISP-SSIDIVTM---ERLTGKDQK---ISE-NFYVRGD 171 (523)
Q Consensus 118 ~~~~------------------~~~~v~~~~~d~~~~~~~~~~~~-~~fD~V~~---~~~~~~~~~---~~~-~~~~~~~ 171 (523)
+... ...+++++++|+.++ ++++ ++||+|++ ...+....+ +.. ...++++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l----~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG 184 (252)
T 2gb4_A 109 EQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL----PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE 184 (252)
T ss_dssp HTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG----GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE
T ss_pred hcccccccccccccccccccccCCCceEEEECccccC----CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC
Confidence 5421 236799999999876 4443 79999997 100010000 000 0134555
Q ss_pred CeEE---------------EeeCHHHHHHHHHhCCCcEEEEE
Q 009871 172 GTRA---------------FYFSNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 172 g~~~---------------~~~~~~~l~~ll~~~Gf~~~~~~ 198 (523)
|.++ +.++.+++.++|.. +|+++...
T Consensus 185 G~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 185 FQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp EEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEEEE
T ss_pred eEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEEEe
Confidence 5542 12588999999986 59887765
No 5
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.59 E-value=1.9e-14 Score=138.48 Aligned_cols=161 Identities=11% Similarity=0.054 Sum_probs=119.7
Q ss_pred cCceEEEEEecccccccCCCcccccchhHHHHHHHHhcCCCCC-CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHH
Q 009871 292 RDRSFKIEVLSKEYQHTCRSTGLMLWESAHLMAAVLARNPTIV-AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIA 370 (523)
Q Consensus 292 ~~~~~~i~~~~~~~~~~~~~~G~~~W~~a~~la~~l~~~~~~~-~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~ 370 (523)
....++|.+... |......+.+|+.++. .. ++.+|||+|||+|.++..++..+..+|+++|+++.+
T Consensus 18 ~~~~~~i~q~~~---------~~~~~~d~~ll~~~~~----~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~ 84 (259)
T 3lpm_A 18 LAENLRIIQSPS---------VFSFSIDAVLLAKFSY----LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERL 84 (259)
T ss_dssp TTTTEEEEEBTT---------TBCCCHHHHHHHHHCC----CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHH
T ss_pred cCCCEEEEeCCC---------CccCcHHHHHHHHHhc----CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHH
Confidence 344566665433 3444455778888762 33 678999999999999998888877799999999999
Q ss_pred HHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCccEEEEccccCCC--------------------CChH
Q 009871 371 LDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIP--------------------EAIL 430 (523)
Q Consensus 371 l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~--------------------~~~~ 430 (523)
++.+++|+..|+.. .++.+...|+.+.. ..+..++||+|+++...+.. ..+.
T Consensus 85 ~~~a~~n~~~~~~~---~~v~~~~~D~~~~~-----~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~ 156 (259)
T 3lpm_A 85 ADMAKRSVAYNQLE---DQIEIIEYDLKKIT-----DLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLE 156 (259)
T ss_dssp HHHHHHHHHHTTCT---TTEEEECSCGGGGG-----GTSCTTCEEEEEECCCC-----------------------HHHH
T ss_pred HHHHHHHHHHCCCc---ccEEEEECcHHHhh-----hhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHH
Confidence 99999999999875 46777766654321 11335799999998766544 2356
Q ss_pred HHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEc
Q 009871 431 PLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 484 (523)
Q Consensus 431 ~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~ 484 (523)
.+++.+.++| +|+|.++++.. ......+...++++||.+.++.
T Consensus 157 ~~l~~~~~~L---------kpgG~l~~~~~--~~~~~~~~~~l~~~~~~~~~~~ 199 (259)
T 3lpm_A 157 DTIRVAASLL---------KQGGKANFVHR--PERLLDIIDIMRKYRLEPKRIQ 199 (259)
T ss_dssp HHHHHHHHHE---------EEEEEEEEEEC--TTTHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHc---------cCCcEEEEEEc--HHHHHHHHHHHHHCCCceEEEE
Confidence 7999999999 67999999753 4456678899999999988763
No 6
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.59 E-value=4.4e-15 Score=142.68 Aligned_cols=73 Identities=21% Similarity=0.302 Sum_probs=62.5
Q ss_pred CCCCeEEEECCCccccHHHHHhhC--CCCEEEEEeCCHHHHHHHHhcccc--CCCcEEEEEeeccCCccCCCCCCCceeE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAY--PDVFVYACDFSPRAVNLVMTHKDF--TETRVSTFVCDLISDDLSRQISPSSIDI 149 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~--~~~~v~gvD~S~~~l~~a~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 149 (523)
.++.+|||||||+|..+..|+++. ++++|+|||+|+.||+.|+++... ...+++++++|+.++ ++ +.||+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~----~~--~~~d~ 142 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI----AI--ENASM 142 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC----CC--CSEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc----cc--ccccc
Confidence 578899999999999999999884 578999999999999999997643 235899999999876 33 46999
Q ss_pred EEE
Q 009871 150 VTM 152 (523)
Q Consensus 150 V~~ 152 (523)
|++
T Consensus 143 v~~ 145 (261)
T 4gek_A 143 VVL 145 (261)
T ss_dssp EEE
T ss_pred cee
Confidence 999
No 7
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.58 E-value=6e-15 Score=139.30 Aligned_cols=152 Identities=17% Similarity=0.241 Sum_probs=94.1
Q ss_pred hHHHHHHHHhcccccccchhhhHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc
Q 009871 42 KKYWDLFYKRHQDRFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF 121 (523)
Q Consensus 42 ~~~Wd~~y~~~~~~f~~~~~~l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~ 121 (523)
..||+.++.........-...+ ...+ +++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++...
T Consensus 3 ~~yw~~~~~~~~~~~~~~~~~~----~~~~--~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~ 74 (235)
T 3sm3_A 3 ESYWEKVSGKNIPSSLDLYPII----HNYL--QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARS 74 (235)
T ss_dssp ---------------CCCCTTH----HHHC--CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTC
T ss_pred hhHHHHHhhccCCCHHHHHHHH----HHhC--CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHh
Confidence 4688887765322111111111 1222 46789999999999999999988 66899999999999999997643
Q ss_pred CC------CcEEEEEeeccCCccCCCCCCCceeEEEE--------------------ccccccceeeecceEEe------
Q 009871 122 TE------TRVSTFVCDLISDDLSRQISPSSIDIVTM--------------------ERLTGKDQKISENFYVR------ 169 (523)
Q Consensus 122 ~~------~~v~~~~~d~~~~~~~~~~~~~~fD~V~~--------------------~~~~~~~~~~~~~~~~~------ 169 (523)
.. .++++.++|+..+ ++++++||+|++ .+.+++++.+.-..+..
T Consensus 75 ~~~~~~~~~~~~~~~~d~~~~----~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~ 150 (235)
T 3sm3_A 75 PGLNQKTGGKAEFKVENASSL----SFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKL 150 (235)
T ss_dssp CSCCSSSSCEEEEEECCTTSC----CSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHH
T ss_pred cCCccccCcceEEEEeccccc----CCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHH
Confidence 32 3689999999877 667889999999 12223333322100000
Q ss_pred -------------cC-------------CeEEEeeCHHHHHHHHHhCCCcEEEEEeEeeeee
Q 009871 170 -------------GD-------------GTRAFYFSNDFLTSLFKENGFDVEELGLCCKQVE 205 (523)
Q Consensus 170 -------------~~-------------g~~~~~~~~~~l~~ll~~~Gf~~~~~~~~~~~~~ 205 (523)
.. ....++++.+++.++|+++||+++.+........
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~ 212 (235)
T 3sm3_A 151 YRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFRVKELETR 212 (235)
T ss_dssp HHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEEEEEEECT
T ss_pred HHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEEecceeec
Confidence 00 1123467999999999999999998876544333
No 8
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.58 E-value=3.4e-15 Score=141.44 Aligned_cols=163 Identities=12% Similarity=0.117 Sum_probs=109.9
Q ss_pred hhHHHHHHHHhcccccccc--hhhhHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhc
Q 009871 41 AKKYWDLFYKRHQDRFFKD--RHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTH 118 (523)
Q Consensus 41 ~~~~Wd~~y~~~~~~f~~~--~~~l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~ 118 (523)
...+|+..|......|... ...+...+. ... .++.+|||||||+|..+..+++. +.+|+|+|+|+.|++.|+++
T Consensus 32 ~~~~w~~~~~~~~~~~~~~~~~~~l~~~~~-~~~-~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~ 107 (235)
T 3lcc_A 32 EEGGWEKCWEEEITPWDQGRATPLIVHLVD-TSS-LPLGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANET 107 (235)
T ss_dssp HHHHHHHHHHTTCCTTCCSSCCHHHHHHHH-TTC-SCCEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCcccCCCCHHHHHHHH-hcC-CCCCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHH
Confidence 4578999988765444321 112222222 122 23469999999999999999875 67899999999999999997
Q ss_pred ccc--CCCcEEEEEeeccCCccCCCCCCCceeEEEEccc---ccc--cee-eec-ceEEecCCeEEE-------------
Q 009871 119 KDF--TETRVSTFVCDLISDDLSRQISPSSIDIVTMERL---TGK--DQK-ISE-NFYVRGDGTRAF------------- 176 (523)
Q Consensus 119 ~~~--~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~---~~~--~~~-~~~-~~~~~~~g~~~~------------- 176 (523)
... ...+++++++|+.+. + ++++||+|++... ... ... +.. .-.++++|.++.
T Consensus 108 ~~~~~~~~~v~~~~~d~~~~----~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 182 (235)
T 3lcc_A 108 YGSSPKAEYFSFVKEDVFTW----R-PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPP 182 (235)
T ss_dssp HTTSGGGGGEEEECCCTTTC----C-CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSS
T ss_pred hhccCCCcceEEEECchhcC----C-CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCC
Confidence 653 235799999999875 2 4569999998111 010 000 000 013455555442
Q ss_pred -eeCHHHHHHHHHhCCCcEEEEEeEeeeeeecccCcc
Q 009871 177 -YFSNDFLTSLFKENGFDVEELGLCCKQVENRARELV 212 (523)
Q Consensus 177 -~~~~~~l~~ll~~~Gf~~~~~~~~~~~~~~~~~~~~ 212 (523)
.++.+++.++|+++||+++.+.........+.....
T Consensus 183 ~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~g~e~ 219 (235)
T 3lcc_A 183 YKVDVSTFEEVLVPIGFKAVSVEENPHAIPTRKGKEK 219 (235)
T ss_dssp CCCCHHHHHHHHGGGTEEEEEEEECTTCCTTTTTSCE
T ss_pred ccCCHHHHHHHHHHcCCeEEEEEecCCccccccCHHH
Confidence 358999999999999999999887776666655433
No 9
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.58 E-value=3.9e-14 Score=137.16 Aligned_cols=151 Identities=9% Similarity=0.049 Sum_probs=119.5
Q ss_pred cchhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEee
Q 009871 316 LWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 395 (523)
Q Consensus 316 ~W~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~l 395 (523)
..++...+.+.+.......++.+|||||||+|.++..++.....+|+++|+|+.+++.+++++..+++. .++.+...
T Consensus 42 ~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~~~~~~~ 118 (273)
T 3bus_A 42 VDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLA---NRVTFSYA 118 (273)
T ss_dssp HHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCC---cceEEEEC
Confidence 344555666777666666688999999999998888888766679999999999999999999887764 46777777
Q ss_pred ecCCCCcchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC------------
Q 009871 396 EWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ------------ 463 (523)
Q Consensus 396 dw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~------------ 463 (523)
|+.+. ++++++||+|++.+++++......+++.+.++| +|||.+++......
T Consensus 119 d~~~~-------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L---------~pgG~l~i~~~~~~~~~~~~~~~~~~ 182 (273)
T 3bus_A 119 DAMDL-------PFEDASFDAVWALESLHHMPDRGRALREMARVL---------RPGGTVAIADFVLLAPVEGAKKEAVD 182 (273)
T ss_dssp CTTSC-------CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTE---------EEEEEEEEEEEEESSCCCHHHHHHHH
T ss_pred ccccC-------CCCCCCccEEEEechhhhCCCHHHHHHHHHHHc---------CCCeEEEEEEeeccCCCChhHHHHHH
Confidence 66543 234568999999999999999999999999999 67999988764421
Q ss_pred -----------CChhHHHHHHHHcCCEEEEEcC
Q 009871 464 -----------VDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 464 -----------~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
.+...+.+.++++||++.++..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 215 (273)
T 3bus_A 183 AFRAGGGVLSLGGIDEYESDVRQAELVVTSTVD 215 (273)
T ss_dssp HHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEE
Confidence 2235567788899999987754
No 10
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.57 E-value=4.6e-15 Score=136.99 Aligned_cols=142 Identities=11% Similarity=-0.014 Sum_probs=102.4
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE--
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM-- 152 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~-- 152 (523)
++ +|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++......++.+.++|+.++ ++++++||+|++
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~~~~~fD~v~~~~ 102 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADF----DIVADAWEGIVSIF 102 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTB----SCCTTTCSEEEEEC
T ss_pred CC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhc----CCCcCCccEEEEEh
Confidence 44 9999999999999999987 56899999999999999987654445799999999876 566789999998
Q ss_pred ---------------ccccccceeeecceEEecC-----C---eEEEeeCHHHHHHHHHhCCCcEEEEEeEeeeeeeccc
Q 009871 153 ---------------ERLTGKDQKISENFYVRGD-----G---TRAFYFSNDFLTSLFKENGFDVEELGLCCKQVENRAR 209 (523)
Q Consensus 153 ---------------~~~~~~~~~~~~~~~~~~~-----g---~~~~~~~~~~l~~ll~~~Gf~~~~~~~~~~~~~~~~~ 209 (523)
.+.+++++.+.-..+...+ + ...++++.+++.++|+ ||+++.+....... ....
T Consensus 103 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~~~~~-~~g~ 179 (202)
T 2kw5_A 103 CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANNLERNL-DEGA 179 (202)
T ss_dssp CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEEEEEC-SCSS
T ss_pred hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEEEEeec-CCCC
Confidence 3334455443321111100 0 1123579999999998 99999888766653 2333
Q ss_pred CccceeEEEEEEEEecC
Q 009871 210 ELVMNRRWVQAVFCSSG 226 (523)
Q Consensus 210 ~~~~~r~~~~~~~~~~~ 226 (523)
.....+.|++..-+|..
T Consensus 180 ~~~~~~~~i~~~~~~~~ 196 (202)
T 2kw5_A 180 YHQGKAALIQLLGQKLE 196 (202)
T ss_dssp SSCCEEEEEEEEECCCS
T ss_pred CcccHHHHHHHHHHhhh
Confidence 33456888888766654
No 11
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.56 E-value=4.3e-14 Score=136.53 Aligned_cols=134 Identities=13% Similarity=0.149 Sum_probs=109.6
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
...++.+|||||||+|.++..++..+..+|+++|+|+.+++.+++++..+++. .++.+...|+.+. +++.
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-------~~~~ 112 (267)
T 3kkz_A 43 NLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQ---NRVTGIVGSMDDL-------PFRN 112 (267)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEECCTTSC-------CCCT
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCC---cCcEEEEcChhhC-------CCCC
Confidence 35678899999999999988888886669999999999999999999988775 5688888777543 2335
Q ss_pred CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-------------------CChhHHHHH
Q 009871 412 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------------VDEPSMLSA 472 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-------------------~~~~~~~~~ 472 (523)
++||+|++..++++. ....+++.+.++| +|||.+++...... .+...+.+.
T Consensus 113 ~~fD~i~~~~~~~~~-~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (267)
T 3kkz_A 113 EELDLIWSEGAIYNI-GFERGLNEWRKYL---------KKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAK 182 (267)
T ss_dssp TCEEEEEESSCGGGT-CHHHHHHHHGGGE---------EEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHH
T ss_pred CCEEEEEEcCCceec-CHHHHHHHHHHHc---------CCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHH
Confidence 789999999999988 7899999999999 67999998765421 123456788
Q ss_pred HHHcCCEEEEEcC
Q 009871 473 ATQCGFRLVDKWP 485 (523)
Q Consensus 473 ~~~~gf~~~~~~~ 485 (523)
++++||++.++..
T Consensus 183 l~~aGf~~v~~~~ 195 (267)
T 3kkz_A 183 IHKAGYLPVATFI 195 (267)
T ss_dssp HHHTTEEEEEEEE
T ss_pred HHHCCCEEEEEEE
Confidence 8999999988754
No 12
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.56 E-value=1.8e-14 Score=138.12 Aligned_cols=141 Identities=14% Similarity=0.137 Sum_probs=111.3
Q ss_pred HHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcc
Q 009871 324 AAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 403 (523)
Q Consensus 324 a~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~ 403 (523)
.+.+.......++.+|||||||+|.++..++.....+|+++|+++.+++.+++++..+++. .++.+...|+.+..
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~---~~v~~~~~d~~~~~-- 99 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVS---ERVHFIHNDAAGYV-- 99 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEESCCTTCC--
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCC---cceEEEECChHhCC--
Confidence 3344443445678899999999998888888776668999999999999999999987764 46778777765431
Q ss_pred hhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec--------------------C
Q 009871 404 EAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR--------------------Q 463 (523)
Q Consensus 404 ~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r--------------------~ 463 (523)
. +++||+|++..++++......+++.+.++| +|||.+++..... .
T Consensus 100 -----~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (256)
T 1nkv_A 100 -----A-NEKCDVAACVGATWIAGGFAGAEELLAQSL---------KPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDF 164 (256)
T ss_dssp -----C-SSCEEEEEEESCGGGTSSSHHHHHHHTTSE---------EEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGS
T ss_pred -----c-CCCCCEEEECCChHhcCCHHHHHHHHHHHc---------CCCeEEEEecCcccCCCChHHHHHHHhccccccc
Confidence 2 468999999999999888999999999999 6799999876432 1
Q ss_pred CChhHHHHHHHHcCCEEEEEc
Q 009871 464 VDEPSMLSAATQCGFRLVDKW 484 (523)
Q Consensus 464 ~~~~~~~~~~~~~gf~~~~~~ 484 (523)
.+...+.+.++++||++.++.
T Consensus 165 ~~~~~~~~~l~~aGf~~~~~~ 185 (256)
T 1nkv_A 165 LTLPGLVGAFDDLGYDVVEMV 185 (256)
T ss_dssp CCHHHHHHHHHTTTBCCCEEE
T ss_pred CCHHHHHHHHHHCCCeeEEEE
Confidence 233567788899999987663
No 13
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.56 E-value=8.2e-14 Score=133.57 Aligned_cols=135 Identities=12% Similarity=0.135 Sum_probs=110.1
Q ss_pred CCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc
Q 009871 331 PTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 410 (523)
Q Consensus 331 ~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~ 410 (523)
....++.+|||||||+|.++..++..++.+|+++|+++.+++.+++++..+++. .++.+...|+.+. +++
T Consensus 42 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~~-------~~~ 111 (257)
T 3f4k_A 42 NELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCA---DRVKGITGSMDNL-------PFQ 111 (257)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEECCTTSC-------SSC
T ss_pred hcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCC---CceEEEECChhhC-------CCC
Confidence 345578899999999999998888887669999999999999999999998875 4678877777443 234
Q ss_pred CCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-------------------CChhHHHH
Q 009871 411 NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------------VDEPSMLS 471 (523)
Q Consensus 411 ~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-------------------~~~~~~~~ 471 (523)
+++||+|++..++++. ....+++.+.++| +|||.+++...... .+...+.+
T Consensus 112 ~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L---------~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (257)
T 3f4k_A 112 NEELDLIWSEGAIYNI-GFERGMNEWSKYL---------KKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCID 181 (257)
T ss_dssp TTCEEEEEEESCSCCC-CHHHHHHHHHTTE---------EEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHH
T ss_pred CCCEEEEEecChHhhc-CHHHHHHHHHHHc---------CCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHH
Confidence 5799999999999998 6899999999999 67999998864311 12346678
Q ss_pred HHHHcCCEEEEEcC
Q 009871 472 AATQCGFRLVDKWP 485 (523)
Q Consensus 472 ~~~~~gf~~~~~~~ 485 (523)
.++++||++.....
T Consensus 182 ~l~~aGf~~v~~~~ 195 (257)
T 3f4k_A 182 KMERAGYTPTAHFI 195 (257)
T ss_dssp HHHHTTEEEEEEEE
T ss_pred HHHHCCCeEEEEEE
Confidence 88999999988754
No 14
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.56 E-value=3.8e-14 Score=135.69 Aligned_cols=142 Identities=15% Similarity=0.167 Sum_probs=111.5
Q ss_pred HhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhh
Q 009871 327 LARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAI 406 (523)
Q Consensus 327 l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~ 406 (523)
+.......++.+|||||||+|.++..++..+..+|+++|+++.+++.+++++. ..++.+...|..+.
T Consensus 36 l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~------ 102 (253)
T 3g5l_A 36 LKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT-------SPVVCYEQKAIEDI------ 102 (253)
T ss_dssp HHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC-------CTTEEEEECCGGGC------
T ss_pred HHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc-------cCCeEEEEcchhhC------
Confidence 33444445789999999999999888888887799999999999999998765 14566666665432
Q ss_pred hhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec------------------------
Q 009871 407 KEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR------------------------ 462 (523)
Q Consensus 407 ~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r------------------------ 462 (523)
+++.++||+|+++.++++......+++.+.++| +|||.++++....
T Consensus 103 -~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (253)
T 3g5l_A 103 -AIEPDAYNVVLSSLALHYIASFDDICKKVYINL---------KSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVD 172 (253)
T ss_dssp -CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHE---------EEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEEC
T ss_pred -CCCCCCeEEEEEchhhhhhhhHHHHHHHHHHHc---------CCCcEEEEEeCCCccccCccccceeccCCceEEEEec
Confidence 234579999999999999999999999999999 6799998873220
Q ss_pred --------------------CCChhHHHHHHHHcCCEEEEEcCCCCCCC
Q 009871 463 --------------------QVDEPSMLSAATQCGFRLVDKWPSKNSAS 491 (523)
Q Consensus 463 --------------------~~~~~~~~~~~~~~gf~~~~~~~~~~~~~ 491 (523)
..+..++.+.++++||++.++....++..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~~~~~ 221 (253)
T 3g5l_A 173 RYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEPAPE 221 (253)
T ss_dssp CTTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECCCCCGG
T ss_pred cccccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeeecCCCchh
Confidence 01556788999999999999987644443
No 15
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.55 E-value=3.2e-14 Score=134.44 Aligned_cols=74 Identities=19% Similarity=0.285 Sum_probs=65.5
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
..++.+|||||||+|..+..+++.+|+.+|+|+|+|+.|++.|+++..... +++++++|+.++ +++ ++||+|++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~----~~~-~~fD~v~~ 115 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSKY----DFE-EKYDMVVS 115 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTTC----CCC-SCEEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhcc----CCC-CCceEEEE
Confidence 356789999999999999999999988999999999999999999865443 899999999876 444 79999999
No 16
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.55 E-value=1.6e-14 Score=138.40 Aligned_cols=77 Identities=19% Similarity=0.231 Sum_probs=66.4
Q ss_pred hhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 69 ~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
+.++..++.+|||||||+|.++..+++.++. +|+|+|+|+.|++.|+++.. ..++++.++|+.++ ++++++||
T Consensus 38 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~----~~~~~~fD 110 (253)
T 3g5l_A 38 KMLPDFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDI----AIEPDAYN 110 (253)
T ss_dssp TTCCCCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGC----CCCTTCEE
T ss_pred HhhhccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhC----CCCCCCeE
Confidence 3445457889999999999999999998543 79999999999999999765 46899999999877 66789999
Q ss_pred EEEE
Q 009871 149 IVTM 152 (523)
Q Consensus 149 ~V~~ 152 (523)
+|++
T Consensus 111 ~v~~ 114 (253)
T 3g5l_A 111 VVLS 114 (253)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9999
No 17
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.54 E-value=4.1e-14 Score=136.24 Aligned_cols=148 Identities=17% Similarity=0.222 Sum_probs=116.4
Q ss_pred cchhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEee
Q 009871 316 LWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 395 (523)
Q Consensus 316 ~W~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~l 395 (523)
.++....+.+.+.......++.+|||+|||+|.++..++.....+|+++|+|+.+++.+++++..+ .++.+...
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~ 109 (266)
T 3ujc_A 36 ISSGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN------NKIIFEAN 109 (266)
T ss_dssp CSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC------TTEEEEEC
T ss_pred cccchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC------CCeEEEEC
Confidence 344555566777776666788999999999998888888874568999999999999998876543 45677766
Q ss_pred ecCCCCcchhhhhhcCCCccEEEEccccCCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC----------
Q 009871 396 EWGNRDHIEAIKEENNEGFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ---------- 463 (523)
Q Consensus 396 dw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~--~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~---------- 463 (523)
|+.+. ++++++||+|++..++++. .....+++.+.++| +|||.+++......
T Consensus 110 d~~~~-------~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L---------~pgG~l~~~~~~~~~~~~~~~~~~ 173 (266)
T 3ujc_A 110 DILTK-------EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWL---------KPTGTLLITDYCATEKENWDDEFK 173 (266)
T ss_dssp CTTTC-------CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHE---------EEEEEEEEEEEEESCGGGCCHHHH
T ss_pred ccccC-------CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHc---------CCCCEEEEEEeccCCcccchHHHH
Confidence 66543 2345799999999999998 88999999999999 67999998765422
Q ss_pred ----------CChhHHHHHHHHcCCEEEEEcC
Q 009871 464 ----------VDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 464 ----------~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
.+...+.+.++++||++.++..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 174 EYVKQRKYTLITVEEYADILTACNFKNVVSKD 205 (266)
T ss_dssp HHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 2445678888999999887754
No 18
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.54 E-value=8.9e-15 Score=139.10 Aligned_cols=115 Identities=17% Similarity=0.175 Sum_probs=86.9
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCCCceeEEEEc
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSIDIVTME 153 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (523)
++.+|||||||+|..+..+++.+ ..+|+|+|+|+.|++.|+++.... ..+++++++|+..+ ++++++||+|++.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~~~~~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF----TPEPDSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC----CCCSSCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhc----CCCCCCEEEEEEc
Confidence 57899999999999999988886 568999999999999999976433 35689999999876 5567799999991
Q ss_pred ------------cccccceeeecceEEecCCeEEE------------------eeCHHHHHHHHHhCCCcEEEEEe
Q 009871 154 ------------RLTGKDQKISENFYVRGDGTRAF------------------YFSNDFLTSLFKENGFDVEELGL 199 (523)
Q Consensus 154 ------------~~~~~~~~~~~~~~~~~~g~~~~------------------~~~~~~l~~ll~~~Gf~~~~~~~ 199 (523)
.++....+ .++++|.+++ .++.+++.++++++||+++++..
T Consensus 154 ~~l~~~~~~~~~~~l~~~~~-----~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 154 WVIGHLTDQHLAEFLRRCKG-----SLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEER 224 (241)
T ss_dssp SCGGGSCHHHHHHHHHHHHH-----HEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHH-----hcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeee
Confidence 11111111 2334443332 34899999999999999887754
No 19
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.54 E-value=1.4e-13 Score=130.59 Aligned_cols=146 Identities=11% Similarity=0.079 Sum_probs=114.4
Q ss_pred ccchhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEe
Q 009871 315 MLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKR 394 (523)
Q Consensus 315 ~~W~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ 394 (523)
..|+++..+.+.+. ..++.+|||+|||+|.++..++..+. +|+++|+++.+++.+++++..++.. ++.+..
T Consensus 5 ~~~~~~~~~~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~----~v~~~~ 75 (239)
T 1xxl_A 5 HHHHSLGLMIKTAE----CRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVE----NVRFQQ 75 (239)
T ss_dssp -CHHHHHHHHHHHT----CCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCC----SEEEEE
T ss_pred ccCCCcchHHHHhC----cCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCC----CeEEEe
Confidence 35777777777763 34678999999999988888887764 8999999999999999999887653 467766
Q ss_pred eecCCCCcchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec------------
Q 009871 395 LEWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR------------ 462 (523)
Q Consensus 395 ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r------------ 462 (523)
.|+.+. ++.+++||+|+++.++++......+++.+.++| +|||.+++.....
T Consensus 76 ~d~~~~-------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~ 139 (239)
T 1xxl_A 76 GTAESL-------PFPDDSFDIITCRYAAHHFSDVRKAVREVARVL---------KQDGRFLLVDHYAPEDPVLDEFVNH 139 (239)
T ss_dssp CBTTBC-------CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHE---------EEEEEEEEEEECBCSSHHHHHHHHH
T ss_pred cccccC-------CCCCCcEEEEEECCchhhccCHHHHHHHHHHHc---------CCCcEEEEEEcCCCCChhHHHHHHH
Confidence 665432 234578999999999999899999999999999 6799998865432
Q ss_pred -----------CCChhHHHHHHHHcCCEEEEEcC
Q 009871 463 -----------QVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 463 -----------~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
..+...+.+.++++||++..+..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~ 173 (239)
T 1xxl_A 140 LNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQK 173 (239)
T ss_dssp HHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHhccccccCCCCHHHHHHHHHHCCCcEEEEEe
Confidence 12345677888899999877643
No 20
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.54 E-value=1.1e-13 Score=136.96 Aligned_cols=141 Identities=9% Similarity=0.059 Sum_probs=112.2
Q ss_pred HHHhcCCC-CCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcc
Q 009871 325 AVLARNPT-IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 403 (523)
Q Consensus 325 ~~l~~~~~-~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~ 403 (523)
+.+..... ..++.+|||+|||+|.++..++.....+|+++|+++.+++.+++|+..+++. .++.+...|..+.
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~--- 179 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRID---DHVRSRVCNMLDT--- 179 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEECCTTSC---
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC---CceEEEECChhcC---
Confidence 44555544 6678999999999999888888874468999999999999999999998775 4677777766543
Q ss_pred hhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCC-------------------
Q 009871 404 EAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQV------------------- 464 (523)
Q Consensus 404 ~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~------------------- 464 (523)
++.+++||+|++.+++++.. ...+++.+.++| +|||.+++.......
T Consensus 180 ----~~~~~~fD~V~~~~~l~~~~-~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
T 3vc1_A 180 ----PFDKGAVTASWNNESTMYVD-LHDLFSEHSRFL---------KVGGRYVTITGCWNPRYGQPSKWVSQINAHFECN 245 (312)
T ss_dssp ----CCCTTCEEEEEEESCGGGSC-HHHHHHHHHHHE---------EEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCC
T ss_pred ----CCCCCCEeEEEECCchhhCC-HHHHHHHHHHHc---------CCCcEEEEEEccccccccchhHHHHHHHhhhcCC
Confidence 23457999999999998884 999999999999 679999887654321
Q ss_pred --ChhHHHHHHHHcCCEEEEEcC
Q 009871 465 --DEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 465 --~~~~~~~~~~~~gf~~~~~~~ 485 (523)
+...+.+.++++||++.++..
T Consensus 246 ~~s~~~~~~~l~~aGf~~~~~~~ 268 (312)
T 3vc1_A 246 IHSRREYLRAMADNRLVPHTIVD 268 (312)
T ss_dssp CCBHHHHHHHHHTTTEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCEEEEEEe
Confidence 235677888999999887744
No 21
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.53 E-value=2.6e-13 Score=132.43 Aligned_cols=146 Identities=16% Similarity=0.140 Sum_probs=114.2
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeec
Q 009871 318 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEW 397 (523)
Q Consensus 318 ~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw 397 (523)
++...+.+.+.......++.+|||||||+|.++..++...+.+|+++|+|+.+++.+++++...+.. .++.+...|+
T Consensus 47 ~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~---~~~~~~~~d~ 123 (287)
T 1kpg_A 47 EAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENL---RSKRVLLAGW 123 (287)
T ss_dssp HHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCC---SCEEEEESCG
T ss_pred HHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCC---CCeEEEECCh
Confidence 4445566677776666788999999999998888888553459999999999999999999876654 4567666555
Q ss_pred CCCCcchhhhhhcCCCccEEEEccccCCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC------------
Q 009871 398 GNRDHIEAIKEENNEGFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ------------ 463 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~--~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~------------ 463 (523)
.+ ++ ++||+|++..++++. +....+++.+.++| +|||.+++......
T Consensus 124 ~~---------~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~ 184 (287)
T 1kpg_A 124 EQ---------FD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLL---------PADGVMLLHTITGLHPKEIHERGLPM 184 (287)
T ss_dssp GG---------CC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHS---------CTTCEEEEEEEEECCHHHHTTTTCSC
T ss_pred hh---------CC-CCeeEEEEeCchhhcChHHHHHHHHHHHHhc---------CCCCEEEEEEecCCCccccccccccc
Confidence 32 22 689999999999886 78999999999999 77999998765432
Q ss_pred ---------------------CChhHHHHHHHHcCCEEEEEcC
Q 009871 464 ---------------------VDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 464 ---------------------~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
.+...+.+.++++||++.++..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~ 227 (287)
T 1kpg_A 185 SFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQS 227 (287)
T ss_dssp HHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEEEE
T ss_pred cccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEEEe
Confidence 1345667778899999988754
No 22
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.53 E-value=2e-14 Score=134.10 Aligned_cols=143 Identities=13% Similarity=0.115 Sum_probs=110.0
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCc
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 402 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~ 402 (523)
+++.+.......++ +|||+|||+|.++..++.....+|+++|+++.+++.+++++..++.. .++.+...|..+.
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~~-- 105 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLN---DRIQIVQGDVHNI-- 105 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEECBTTBC--
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhcccc---CceEEEEcCHHHC--
Confidence 44444433333344 99999999998888888875568999999999999999999988764 4677777766543
Q ss_pred chhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec--------------------
Q 009871 403 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-------------------- 462 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r-------------------- 462 (523)
++++++||+|+++.++++......+++.+.++| +|||.++++....
T Consensus 106 -----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L---------~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (219)
T 3dlc_A 106 -----PIEDNYADLIVSRGSVFFWEDVATAFREIYRIL---------KSGGKTYIGGGFGNKELRDSISAEMIRKNPDWK 171 (219)
T ss_dssp -----SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHE---------EEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHH
T ss_pred -----CCCcccccEEEECchHhhccCHHHHHHHHHHhC---------CCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHH
Confidence 234578999999999999999999999999999 6799999874321
Q ss_pred --------CCChhHHHHHHHHcCCEEEEEcC
Q 009871 463 --------QVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 463 --------~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
..+...+.+.++++||+..++..
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 202 (219)
T 3dlc_A 172 EFNRKNISQENVERFQNVLDEIGISSYEIIL 202 (219)
T ss_dssp HHHHHHSSHHHHHHHHHHHHHHTCSSEEEEE
T ss_pred hhhhhccccCCHHHHHHHHHHcCCCeEEEEe
Confidence 11224567788999999877754
No 23
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.53 E-value=1.2e-13 Score=135.62 Aligned_cols=135 Identities=12% Similarity=0.145 Sum_probs=108.7
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
...++.+|||+|||+|.++..++.....+|+++|+++.+++.+++++...+.. .++.+...|+.+. ++++
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~~-------~~~~ 148 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLA---DNITVKYGSFLEI-------PCED 148 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCT---TTEEEEECCTTSC-------SSCT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCC---cceEEEEcCcccC-------CCCC
Confidence 45578899999999998888888773458999999999999999999887764 4677777766543 2345
Q ss_pred CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC--------------------CChhHHHH
Q 009871 412 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ--------------------VDEPSMLS 471 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~--------------------~~~~~~~~ 471 (523)
++||+|++.+++++......+++.+.++| +|||.+++...... .+...+.+
T Consensus 149 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (297)
T 2o57_A 149 NSYDFIWSQDAFLHSPDKLKVFQECARVL---------KPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRS 219 (297)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHE---------EEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHH
T ss_pred CCEeEEEecchhhhcCCHHHHHHHHHHHc---------CCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHH
Confidence 78999999999999888999999999999 67999998765421 13345667
Q ss_pred HHHHcCCEEEEEcC
Q 009871 472 AATQCGFRLVDKWP 485 (523)
Q Consensus 472 ~~~~~gf~~~~~~~ 485 (523)
.++++||++.++..
T Consensus 220 ~l~~aGf~~~~~~~ 233 (297)
T 2o57_A 220 LAKECGLVTLRTFS 233 (297)
T ss_dssp HHHHTTEEEEEEEE
T ss_pred HHHHCCCeEEEEEE
Confidence 88899999988754
No 24
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.52 E-value=8.7e-14 Score=130.02 Aligned_cols=133 Identities=13% Similarity=0.037 Sum_probs=108.9
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 410 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~ 410 (523)
..++.+|||+|||+|.++..++..+ ..+|+++|+++.+++.+++++..++.. ++.+...|..+. ++.
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~~~~~~d~~~~-------~~~ 103 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK----NVEVLKSEENKI-------PLP 103 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT----TEEEEECBTTBC-------SSC
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC----cEEEEecccccC-------CCC
Confidence 3467899999999998888888875 358999999999999999999887763 577776666443 234
Q ss_pred CCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-----------CCChhHHHHHHHHcCCE
Q 009871 411 NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-----------QVDEPSMLSAATQCGFR 479 (523)
Q Consensus 411 ~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r-----------~~~~~~~~~~~~~~gf~ 479 (523)
.++||+|+++.++++......+++.+.++| +|||.+++..... ..+...+.+.++++||+
T Consensus 104 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L---------kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 174 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEPLKFLEELKRVA---------KPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIR 174 (219)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHHE---------EEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCE
T ss_pred CCCeeEEEeehhhhhcCCHHHHHHHHHHHh---------CCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCE
Confidence 568999999999999999999999999999 6799999876442 23457788999999999
Q ss_pred EEEEcC
Q 009871 480 LVDKWP 485 (523)
Q Consensus 480 ~~~~~~ 485 (523)
+.++..
T Consensus 175 ~~~~~~ 180 (219)
T 3dh0_A 175 VGRVVE 180 (219)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 988755
No 25
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.52 E-value=3e-14 Score=132.84 Aligned_cols=129 Identities=16% Similarity=0.196 Sum_probs=92.0
Q ss_pred HHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCC
Q 009871 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQI 142 (523)
Q Consensus 65 ~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~ 142 (523)
..+.+.+...++ +|||||||+|.++..+++. ++.+|+|+|+|+.|++.|+++.... ..+++++++|+.++ ++
T Consensus 34 ~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~~ 107 (219)
T 3dlc_A 34 ENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNI----PI 107 (219)
T ss_dssp HHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBC----SS
T ss_pred HHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHC----CC
Confidence 333344443344 9999999999999999988 6788999999999999999976433 35799999999987 67
Q ss_pred CCCceeEEEEcc---ccccce-eeec-ceEEecCCeEEE---------------------------------eeCHHHHH
Q 009871 143 SPSSIDIVTMER---LTGKDQ-KISE-NFYVRGDGTRAF---------------------------------YFSNDFLT 184 (523)
Q Consensus 143 ~~~~fD~V~~~~---~~~~~~-~~~~-~~~~~~~g~~~~---------------------------------~~~~~~l~ 184 (523)
++++||+|++.. ...... .+.. ...++++|.+++ +++.+++.
T Consensus 108 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (219)
T 3dlc_A 108 EDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQ 187 (219)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHH
T ss_pred CcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHH
Confidence 789999999911 100000 0000 113555665543 13568899
Q ss_pred HHHHhCCCcEEEEEe
Q 009871 185 SLFKENGFDVEELGL 199 (523)
Q Consensus 185 ~ll~~~Gf~~~~~~~ 199 (523)
++|+++||+.+++..
T Consensus 188 ~~l~~aGf~~v~~~~ 202 (219)
T 3dlc_A 188 NVLDEIGISSYEIIL 202 (219)
T ss_dssp HHHHHHTCSSEEEEE
T ss_pred HHHHHcCCCeEEEEe
Confidence 999999999877653
No 26
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.52 E-value=3.5e-14 Score=137.79 Aligned_cols=86 Identities=23% Similarity=0.290 Sum_probs=71.2
Q ss_pred hHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCC
Q 009871 63 LDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQ 141 (523)
Q Consensus 63 l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~ 141 (523)
+...+.......++.+|||||||+|..+..+++.+|+.+|+|+|+|+.|++.|+++.... ..+++++++|+..+ +
T Consensus 25 l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~ 100 (276)
T 3mgg_A 25 LEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSL----P 100 (276)
T ss_dssp HHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGC----C
T ss_pred HHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccC----C
Confidence 333333333346788999999999999999999988899999999999999999976433 35799999999977 6
Q ss_pred CCCCceeEEEE
Q 009871 142 ISPSSIDIVTM 152 (523)
Q Consensus 142 ~~~~~fD~V~~ 152 (523)
+++++||+|++
T Consensus 101 ~~~~~fD~v~~ 111 (276)
T 3mgg_A 101 FEDSSFDHIFV 111 (276)
T ss_dssp SCTTCEEEEEE
T ss_pred CCCCCeeEEEE
Confidence 77899999999
No 27
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.51 E-value=3.1e-13 Score=132.93 Aligned_cols=143 Identities=13% Similarity=0.105 Sum_probs=112.3
Q ss_pred HHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCC
Q 009871 321 HLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNR 400 (523)
Q Consensus 321 ~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~ 400 (523)
....+.+.......++.+|||||||+|.++..++...+.+|+++|+|+.+++.+++++..+++. .++.+...|+.+
T Consensus 58 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~- 133 (302)
T 3hem_A 58 YAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSP---RRKEVRIQGWEE- 133 (302)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCS---SCEEEEECCGGG-
T ss_pred HHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCC---CceEEEECCHHH-
Confidence 3344555555566688999999999999998888883478999999999999999999988765 467777666532
Q ss_pred CcchhhhhhcCCCccEEEEccccCCC---------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC--------
Q 009871 401 DHIEAIKEENNEGFEVILGTDVSYIP---------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------- 463 (523)
Q Consensus 401 ~~~~~~~~~~~~~fD~Ii~~d~~y~~---------~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-------- 463 (523)
+ +++||+|++..++++. +....+++.+.++| +|||.+++......
T Consensus 134 --------~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~L---------kpgG~l~i~~~~~~~~~~~~~~ 195 (302)
T 3hem_A 134 --------F-DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLT---------PDDGRMLLHTITIPDKEEAQEL 195 (302)
T ss_dssp --------C-CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSS---------CTTCEEEEEEEECCCHHHHHHH
T ss_pred --------c-CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhc---------CCCcEEEEEEEeccCccchhhc
Confidence 2 4699999999998876 34589999999999 78999998776422
Q ss_pred -------------------------CChhHHHHHHHHcCCEEEEEcC
Q 009871 464 -------------------------VDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 464 -------------------------~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
.+...+.+.+++.||++.++..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~~~ 242 (302)
T 3hem_A 196 GLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVERYHR 242 (302)
T ss_dssp TCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEEEE
T ss_pred cccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEEEe
Confidence 1234577788899999988855
No 28
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.51 E-value=7.4e-14 Score=132.58 Aligned_cols=120 Identities=19% Similarity=0.209 Sum_probs=88.5
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEEc
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTME 153 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (523)
+++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++. ...+++++++|+.++ ++++++||+|++.
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~d~~~~----~~~~~~fD~v~~~ 123 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERG--EGPDLSFIKGDLSSL----PFENEQFEAIMAI 123 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTT--CBTTEEEEECBTTBC----SSCTTCEEEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhc--ccCCceEEEcchhcC----CCCCCCccEEEEc
Confidence 36789999999999999999988 668999999999999999875 236799999999977 6778999999991
Q ss_pred ccc---ccc-eeeec-ceEEecCCeEEE-------------------------eeCHHHHHHHHHhCCCcEEEEEeEe
Q 009871 154 RLT---GKD-QKISE-NFYVRGDGTRAF-------------------------YFSNDFLTSLFKENGFDVEELGLCC 201 (523)
Q Consensus 154 ~~~---~~~-~~~~~-~~~~~~~g~~~~-------------------------~~~~~~l~~ll~~~Gf~~~~~~~~~ 201 (523)
..+ ... ..+.. .-.++++|.+++ +++.+++.++++++||++++.....
T Consensus 124 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 201 (242)
T 3l8d_A 124 NSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGVY 201 (242)
T ss_dssp SCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeeccc
Confidence 100 000 00000 012344443332 2688999999999999998776443
No 29
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.51 E-value=8.5e-14 Score=131.21 Aligned_cols=131 Identities=17% Similarity=0.114 Sum_probs=100.4
Q ss_pred CCCCeEEEECCC-ccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 334 VAGKKVLELGCG-CGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 334 ~~~~~VLElG~G-~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
.++.+|||+||| +|.++..++.....+|+++|+++.+++.+++|+..++. ++.+...|+.... .+.++
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~v~~~~~d~~~~~------~~~~~ 122 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS-----NVRLVKSNGGIIK------GVVEG 122 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC-----CCEEEECSSCSST------TTCCS
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC-----CcEEEeCCchhhh------hcccC
Confidence 478899999999 99888888877567899999999999999999999875 4566666653221 23357
Q ss_pred CccEEEEccccCCCCC-------------------hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHH
Q 009871 413 GFEVILGTDVSYIPEA-------------------ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAA 473 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~~-------------------~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~ 473 (523)
+||+|+++...+.... +..+++.+.++| +|||.+++....+......+.+.+
T Consensus 123 ~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~l 193 (230)
T 3evz_A 123 TFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHL---------NPGGKVALYLPDKEKLLNVIKERG 193 (230)
T ss_dssp CEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGE---------EEEEEEEEEEESCHHHHHHHHHHH
T ss_pred ceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHh---------CCCeEEEEEecccHhHHHHHHHHH
Confidence 8999998755543221 477888899999 679999987765544456788899
Q ss_pred HHcCCEEEEEc
Q 009871 474 TQCGFRLVDKW 484 (523)
Q Consensus 474 ~~~gf~~~~~~ 484 (523)
++.||.+..+.
T Consensus 194 ~~~g~~~~~~~ 204 (230)
T 3evz_A 194 IKLGYSVKDIK 204 (230)
T ss_dssp HHTTCEEEEEE
T ss_pred HHcCCceEEEE
Confidence 99999988763
No 30
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.51 E-value=1.3e-13 Score=128.08 Aligned_cols=137 Identities=16% Similarity=0.102 Sum_probs=97.4
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE-
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM- 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~- 152 (523)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++. ++.+.++|+..+ + ++++||+|++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~----~-~~~~fD~v~~~ 109 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL-----GRPVRTMLFHQL----D-AIDAYDAVWAH 109 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH-----TSCCEECCGGGC----C-CCSCEEEEEEC
T ss_pred CCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc-----CCceEEeeeccC----C-CCCcEEEEEec
Confidence 45789999999999999999988 568999999999999999875 467888999876 4 5789999999
Q ss_pred ------------------ccccccceeeecceE------EecCCeEEEeeCHHHHHHHHHhCC-CcEEEEEeEeeeeeec
Q 009871 153 ------------------ERLTGKDQKISENFY------VRGDGTRAFYFSNDFLTSLFKENG-FDVEELGLCCKQVENR 207 (523)
Q Consensus 153 ------------------~~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~l~~ll~~~G-f~~~~~~~~~~~~~~~ 207 (523)
.+.+++++.+.-... ....+....+++.+++.++++++| |+++.+.........+
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~~~ 189 (211)
T 3e23_A 110 ACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGFDQ 189 (211)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECTTS
T ss_pred CchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCCCC
Confidence 122233333221100 001122334579999999999999 9998876554332221
Q ss_pred ccCccceeEEEEEEEEecCC
Q 009871 208 ARELVMNRRWVQAVFCSSGG 227 (523)
Q Consensus 208 ~~~~~~~r~~~~~~~~~~~~ 227 (523)
-...|+.....++..
T Consensus 190 -----~~~~wl~~~~~~~~~ 204 (211)
T 3e23_A 190 -----ELAQFLHVSVRKPEL 204 (211)
T ss_dssp -----CEEEEEEEEEECCCC
T ss_pred -----CCceEEEEEEecCcc
Confidence 136788777777654
No 31
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.51 E-value=1.9e-13 Score=131.36 Aligned_cols=131 Identities=15% Similarity=0.100 Sum_probs=104.0
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++.+|||||||+|.++..++..++ +|+++|+|+.|++.+++++..++.. ++.+...|..+. ++++++
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~----~v~~~~~d~~~l-------~~~~~~ 103 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQ----QVEYVQGDAEQM-------PFTDER 103 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCC----SEEEEECCC-CC-------CSCTTC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCC----ceEEEEecHHhC-------CCCCCC
Confidence 4678999999999988888888764 8999999999999999999887653 466666555432 234579
Q ss_pred ccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-----------------------CCChhHHH
Q 009871 414 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-----------------------QVDEPSML 470 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r-----------------------~~~~~~~~ 470 (523)
||+|+++.++++..+...+++.+.++| +|||.+++..... ..+...+.
T Consensus 104 fD~V~~~~~l~~~~d~~~~l~~~~r~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (260)
T 1vl5_A 104 FHIVTCRIAAHHFPNPASFVSEAYRVL---------KKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWL 174 (260)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHE---------EEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHH
T ss_pred EEEEEEhhhhHhcCCHHHHHHHHHHHc---------CCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHH
Confidence 999999999999999999999999999 6799998864331 12335677
Q ss_pred HHHHHcCCEEEEEcC
Q 009871 471 SAATQCGFRLVDKWP 485 (523)
Q Consensus 471 ~~~~~~gf~~~~~~~ 485 (523)
+.+++.||++..+..
T Consensus 175 ~~l~~aGf~~~~~~~ 189 (260)
T 1vl5_A 175 KMLEEAGFELEELHC 189 (260)
T ss_dssp HHHHHHTCEEEEEEE
T ss_pred HHHHHCCCeEEEEEE
Confidence 888899999877643
No 32
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.51 E-value=1.8e-14 Score=133.32 Aligned_cols=122 Identities=14% Similarity=0.092 Sum_probs=85.8
Q ss_pred cCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc-------------CCCcEEEEEeeccCCcc
Q 009871 72 SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-------------TETRVSTFVCDLISDDL 138 (523)
Q Consensus 72 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~-------------~~~~v~~~~~d~~~~~~ 138 (523)
...++.+|||+|||+|..+..|+++ +++|+|||+|+.||+.|+++... ...+++++++|+.++
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l-- 94 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL-- 94 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS--
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC--
Confidence 3357789999999999999999998 56899999999999999987532 236799999999977
Q ss_pred CCCCCC-CceeEEEE-------------------ccccccceeeecceEEec---CCeEEEeeCHHHHHHHHHhCCCcEE
Q 009871 139 SRQISP-SSIDIVTM-------------------ERLTGKDQKISENFYVRG---DGTRAFYFSNDFLTSLFKENGFDVE 195 (523)
Q Consensus 139 ~~~~~~-~~fD~V~~-------------------~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~l~~ll~~~Gf~~~ 195 (523)
++++ ++||+|++ .+.+++++.+.-.....+ .+...+.++.+++.+++.+ ||++.
T Consensus 95 --~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~ 171 (203)
T 1pjz_A 95 --TARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVT 171 (203)
T ss_dssp --THHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEE
T ss_pred --CcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEE
Confidence 4544 78999997 222344443110000000 0011123588999999988 99876
Q ss_pred EEEeE
Q 009871 196 ELGLC 200 (523)
Q Consensus 196 ~~~~~ 200 (523)
.+...
T Consensus 172 ~~~~~ 176 (203)
T 1pjz_A 172 KVGGQ 176 (203)
T ss_dssp EEEES
T ss_pred Eeccc
Confidence 66543
No 33
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.51 E-value=6.7e-14 Score=130.80 Aligned_cols=126 Identities=18% Similarity=0.134 Sum_probs=93.3
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhC-CCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCCCce
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
.+...++.+|||+|||+|.++..+++.+ |..+|+|+|+|+.|++.|+++.... ..++++.++|+.++ ++++++|
T Consensus 32 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~~~~~~f 107 (219)
T 3dh0_A 32 EFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKI----PLPDNTV 107 (219)
T ss_dssp HHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBC----SSCSSCE
T ss_pred HhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccC----CCCCCCe
Confidence 3444678899999999999999999985 7789999999999999999976432 24799999999877 5678899
Q ss_pred eEEEEccc---ccc-ceeeec-ceEEecCCeEEE----------------eeCHHHHHHHHHhCCCcEEEEEe
Q 009871 148 DIVTMERL---TGK-DQKISE-NFYVRGDGTRAF----------------YFSNDFLTSLFKENGFDVEELGL 199 (523)
Q Consensus 148 D~V~~~~~---~~~-~~~~~~-~~~~~~~g~~~~----------------~~~~~~l~~ll~~~Gf~~~~~~~ 199 (523)
|+|++... ... ...+.. ...++++|.+++ +++.+++.++++++||++++...
T Consensus 108 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 180 (219)
T 3dh0_A 108 DFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVE 180 (219)
T ss_dssp EEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEE
T ss_pred eEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEe
Confidence 99999111 000 000000 113555555543 34789999999999999887654
No 34
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.51 E-value=4.9e-14 Score=135.74 Aligned_cols=68 Identities=16% Similarity=0.233 Sum_probs=59.5
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
+++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.|+++. .+++++++|+.++ ++ +++||+|++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~----~~-~~~fD~v~~ 116 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRN----PDAVLHHGDMRDF----SL-GRRFSAVTC 116 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHC----TTSEEEECCTTTC----CC-SCCEEEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhC----CCCEEEECChHHC----Cc-cCCcCEEEE
Confidence 356899999999999999999884 57999999999999999875 3689999999876 44 679999998
No 35
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.50 E-value=2.4e-13 Score=130.90 Aligned_cols=128 Identities=12% Similarity=0.151 Sum_probs=93.1
Q ss_pred HHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCC
Q 009871 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISP 144 (523)
Q Consensus 65 ~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 144 (523)
..+.+.+...++.+|||||||+|..+..+++.+ +++|+|+|+|+.|++.|+++.... .+++++++|+.++ ++++
T Consensus 45 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~----~~~~ 118 (266)
T 3ujc_A 45 KKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILTK----EFPE 118 (266)
T ss_dssp HHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTC----CCCT
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccC----CCCC
Confidence 333444555678899999999999999999986 678999999999999999987544 7899999999987 6778
Q ss_pred CceeEEEEccccccc------eeeec-ceEEecCCeEEE-------------------------eeCHHHHHHHHHhCCC
Q 009871 145 SSIDIVTMERLTGKD------QKISE-NFYVRGDGTRAF-------------------------YFSNDFLTSLFKENGF 192 (523)
Q Consensus 145 ~~fD~V~~~~~~~~~------~~~~~-~~~~~~~g~~~~-------------------------~~~~~~l~~ll~~~Gf 192 (523)
++||+|++...+... ..+.. ...++++|.+++ +++.+++.++++++||
T Consensus 119 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 198 (266)
T 3ujc_A 119 NNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNF 198 (266)
T ss_dssp TCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTC
T ss_pred CcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCC
Confidence 999999991100000 00000 012344443322 3578999999999999
Q ss_pred cEEEEE
Q 009871 193 DVEELG 198 (523)
Q Consensus 193 ~~~~~~ 198 (523)
+++.+.
T Consensus 199 ~~~~~~ 204 (266)
T 3ujc_A 199 KNVVSK 204 (266)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 987664
No 36
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.50 E-value=3.2e-13 Score=131.67 Aligned_cols=142 Identities=15% Similarity=0.074 Sum_probs=110.7
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCc
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 402 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~ 402 (523)
+.+++...+ .++.+|||||||+|.++..++..+ .+|+++|+++.+++.+++++..++.. .++.+...|+.+..
T Consensus 58 l~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~~- 130 (285)
T 4htf_A 58 LDRVLAEMG--PQKLRVLDAGGGEGQTAIKMAERG-HQVILCDLSAQMIDRAKQAAEAKGVS---DNMQFIHCAAQDVA- 130 (285)
T ss_dssp HHHHHHHTC--SSCCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHC-CCG---GGEEEEESCGGGTG-
T ss_pred HHHHHHhcC--CCCCEEEEeCCcchHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCC---cceEEEEcCHHHhh-
Confidence 334444433 246799999999998888888874 58999999999999999999887664 46777766664431
Q ss_pred chhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee---------------------
Q 009871 403 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF--------------------- 461 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~--------------------- 461 (523)
.+.+++||+|++..++++......+++.+.++| +|||.+++....
T Consensus 131 -----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (285)
T 4htf_A 131 -----SHLETPVDLILFHAVLEWVADPRSVLQTLWSVL---------RPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGM 196 (285)
T ss_dssp -----GGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTE---------EEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTC
T ss_pred -----hhcCCCceEEEECchhhcccCHHHHHHHHHHHc---------CCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhc
Confidence 234679999999999999999999999999999 679999987642
Q ss_pred -----------cCCChhHHHHHHHHcCCEEEEEcC
Q 009871 462 -----------RQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 462 -----------r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
+..+..++.+.++++||++.++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~ 231 (285)
T 4htf_A 197 PKKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGKTG 231 (285)
T ss_dssp CCC----CCCSCCBCHHHHHHHHHHTTCEEEEEEE
T ss_pred cccccccCCCCCCCCHHHHHHHHHHCCCceeeeee
Confidence 122346788889999999987754
No 37
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.50 E-value=7.5e-14 Score=137.18 Aligned_cols=76 Identities=17% Similarity=0.186 Sum_probs=63.3
Q ss_pred hhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC----CcEEEEEeeccCCccCCCCCC
Q 009871 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE----TRVSTFVCDLISDDLSRQISP 144 (523)
Q Consensus 69 ~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~ 144 (523)
+.+. ..+.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++....+ .+++++++|+.++ ++ +
T Consensus 77 ~~~~-~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~----~~-~ 148 (299)
T 3g2m_A 77 TRTG-PVSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF----AL-D 148 (299)
T ss_dssp HHHC-CCCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC----CC-S
T ss_pred HhhC-CCCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC----Cc-C
Confidence 3444 34459999999999999999988 5679999999999999999875544 6799999999976 44 6
Q ss_pred CceeEEEE
Q 009871 145 SSIDIVTM 152 (523)
Q Consensus 145 ~~fD~V~~ 152 (523)
++||+|++
T Consensus 149 ~~fD~v~~ 156 (299)
T 3g2m_A 149 KRFGTVVI 156 (299)
T ss_dssp CCEEEEEE
T ss_pred CCcCEEEE
Confidence 78999986
No 38
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.49 E-value=2e-13 Score=127.60 Aligned_cols=134 Identities=16% Similarity=0.196 Sum_probs=100.0
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCC-CEEEEEcCChHHHHHHHHHHHhcCCCC-CCCceEEEeeecCCCCcchhhhhhcC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPP-FLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~-~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
.++.+|||||||+|.++..++..++ .+|+++|+|+.+++.+++++..++... ...++.+...|+... +...
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-------~~~~ 100 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR-------DKRF 100 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC-------CGGG
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc-------cccc
Confidence 4678999999999998888888765 699999999999999999988776531 011577776666332 1234
Q ss_pred CCccEEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC--------------------CChhHH
Q 009871 412 EGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ--------------------VDEPSM 469 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~--------------------~~~~~~ 469 (523)
++||+|++++++++.. ....+++.+.++| +|||.++.+..... .+..++
T Consensus 101 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~L---------kpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (219)
T 3jwg_A 101 SGYDAATVIEVIEHLDENRLQAFEKVLFEFT---------RPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEF 171 (219)
T ss_dssp TTCSEEEEESCGGGCCHHHHHHHHHHHHTTT---------CCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHH
T ss_pred CCCCEEEEHHHHHhCCHHHHHHHHHHHHHhh---------CCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHH
Confidence 6899999999998876 3478999999999 67886665543311 133445
Q ss_pred H----HHHHHcCCEEEEE
Q 009871 470 L----SAATQCGFRLVDK 483 (523)
Q Consensus 470 ~----~~~~~~gf~~~~~ 483 (523)
. ..++++||++...
T Consensus 172 ~~~~~~l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 172 QTWAVKVAEKYGYSVRFL 189 (219)
T ss_dssp HHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHCCcEEEEE
Confidence 5 6778899998766
No 39
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.49 E-value=4.5e-13 Score=129.93 Aligned_cols=146 Identities=16% Similarity=0.152 Sum_probs=114.8
Q ss_pred HHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecC
Q 009871 320 AHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWG 398 (523)
Q Consensus 320 a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~ 398 (523)
...+.+++.......++.+|||||||+|.++..++..+ ..+|+++|+++.+++.+++++..++.. ++.+...|..
T Consensus 22 ~~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~~~~~~d~~ 97 (276)
T 3mgg_A 22 AETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK----NVKFLQANIF 97 (276)
T ss_dssp -CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC----SEEEEECCGG
T ss_pred HHHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEcccc
Confidence 44567777776666788999999999999888888875 469999999999999999999987763 4666665554
Q ss_pred CCCcchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec----------------
Q 009871 399 NRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR---------------- 462 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r---------------- 462 (523)
+. ++++++||+|+++.++++......+++.+.++| +|||.+++.....
T Consensus 98 ~~-------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L---------~pgG~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (276)
T 3mgg_A 98 SL-------PFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVL---------KPGGTITVIEGDHGSCYFHPEGKKAIEAW 161 (276)
T ss_dssp GC-------CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHE---------EEEEEEEEEEECGGGCEEESCCHHHHHHH
T ss_pred cC-------CCCCCCeeEEEEechhhhcCCHHHHHHHHHHHc---------CCCcEEEEEEcCCCCceECCCcHHHHHHH
Confidence 32 234579999999999999999999999999999 6799998865321
Q ss_pred -------------CCChhHHHHHHHHcCCEEEEEcC
Q 009871 463 -------------QVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 463 -------------~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
......+...++++||++.++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~~~ 197 (276)
T 3mgg_A 162 NCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRVEP 197 (276)
T ss_dssp HHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEEee
Confidence 01124567788999999887753
No 40
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.49 E-value=1.4e-13 Score=129.93 Aligned_cols=135 Identities=15% Similarity=0.110 Sum_probs=106.1
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCC-CCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPF-LAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~-~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++++..++.... ..++.+...+..+. ++..++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-------~~~~~~ 101 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKG-YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL-------SFHDSS 101 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC-------CSCTTC
T ss_pred CCCeEEEECCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc-------CCCCCc
Confidence 67899999999998888888884 4899999999999999999887665321 13456665555432 234578
Q ss_pred ccEEEEccccCCCCChH---HHHHHHHHHhhccCCCCCCCCCcEEEEEEee-----------------------------
Q 009871 414 FEVILGTDVSYIPEAIL---PLFATAKELTASSNKSLREDQQPAFILCHIF----------------------------- 461 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~~~---~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~----------------------------- 461 (523)
||+|+++.++++..... .+++.+.++| +|||.++++...
T Consensus 102 ~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L---------~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (235)
T 3sm3_A 102 FDFAVMQAFLTSVPDPKERSRIIKEVFRVL---------KPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARD 172 (235)
T ss_dssp EEEEEEESCGGGCCCHHHHHHHHHHHHHHE---------EEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEEC
T ss_pred eeEEEEcchhhcCCCHHHHHHHHHHHHHHc---------CCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecc
Confidence 99999999999887777 8999999999 679999887442
Q ss_pred ----------cCCChhHHHHHHHHcCCEEEEEcCC
Q 009871 462 ----------RQVDEPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 462 ----------r~~~~~~~~~~~~~~gf~~~~~~~~ 486 (523)
+..+.+++.+.++++||++..+...
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 173 PETGETEFIAHHFTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp TTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred cccCCcceeeEeCCHHHHHHHHHHcCCEEEEEEec
Confidence 2345677889999999999988654
No 41
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.49 E-value=1.9e-13 Score=131.90 Aligned_cols=121 Identities=16% Similarity=0.205 Sum_probs=88.2
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCceeEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
..++.+|||||||+|..+..+++. ++++|+|+|+|+.|++.|+++.... ..+++++++|+.++ ++++++||+|
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~fD~i 118 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL----PFRNEELDLI 118 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC----CCCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC----CCCCCCEEEE
Confidence 467889999999999999999988 5679999999999999999976433 25699999999877 6678899999
Q ss_pred EEcccc---ccceeeec-ceEEecCCeEEE------------------------eeCHHHHHHHHHhCCCcEEEEE
Q 009871 151 TMERLT---GKDQKISE-NFYVRGDGTRAF------------------------YFSNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 151 ~~~~~~---~~~~~~~~-~~~~~~~g~~~~------------------------~~~~~~l~~ll~~~Gf~~~~~~ 198 (523)
++...+ .....+.. ...++++|.+++ +++.+++.++++++||+++.+.
T Consensus 119 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (267)
T 3kkz_A 119 WSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATF 194 (267)
T ss_dssp EESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEE
T ss_pred EEcCCceecCHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 991100 00000000 013344444332 2378899999999999987663
No 42
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.49 E-value=1.4e-13 Score=130.73 Aligned_cols=131 Identities=13% Similarity=-0.006 Sum_probs=102.8
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||||||+|.++..+++.+..+|+++|+++.+++.+++++..++. .++.+...|+.+. +...++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~~d~~~~-------~~~~~~f 147 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK----RVRNYFCCGLQDF-------TPEPDSY 147 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG----GEEEEEECCGGGC-------CCCSSCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC----ceEEEEEcChhhc-------CCCCCCE
Confidence 5789999999999888888887767999999999999999998876531 3466666555432 1234589
Q ss_pred cEEEEccccCCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-------------CChhHHHHHHHHcCCE
Q 009871 415 EVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------VDEPSMLSAATQCGFR 479 (523)
Q Consensus 415 D~Ii~~d~~y~~~~--~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-------------~~~~~~~~~~~~~gf~ 479 (523)
|+|++..++++... ...+++.+.++| +|||.++++..... .+...+.+.++++||+
T Consensus 148 D~v~~~~~l~~~~~~~~~~~l~~~~~~L---------kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 218 (241)
T 2ex4_A 148 DVIWIQWVIGHLTDQHLAEFLRRCKGSL---------RPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLS 218 (241)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHE---------EEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCC
T ss_pred EEEEEcchhhhCCHHHHHHHHHHHHHhc---------CCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCe
Confidence 99999999888765 558999999999 67999998654321 1456788999999999
Q ss_pred EEEEcC
Q 009871 480 LVDKWP 485 (523)
Q Consensus 480 ~~~~~~ 485 (523)
+.+...
T Consensus 219 ~~~~~~ 224 (241)
T 2ex4_A 219 LLAEER 224 (241)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 988865
No 43
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.48 E-value=2.1e-13 Score=131.23 Aligned_cols=160 Identities=11% Similarity=0.199 Sum_probs=103.6
Q ss_pred hhHHHHHHHHhcccccccch--hhhHHHHhhhh--cCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHH
Q 009871 41 AKKYWDLFYKRHQDRFFKDR--HYLDKEWGRYF--SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVM 116 (523)
Q Consensus 41 ~~~~Wd~~y~~~~~~f~~~~--~~l~~~~~~~~--~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~ 116 (523)
...||+.||..+...+..++ .+..+.+..++ +..++.+|||||||+|.++..+++.++ .+|+|+|+|+.|++.|+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~ 96 (265)
T 2i62_A 18 PRDYLEKYYSFGSRHCAENEILRHLLKNLFKIFCLGAVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQ 96 (265)
T ss_dssp HHHHHHHHHCCCSSCHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhCcCCcchhHHHHHHhhHHHHHHHhcccccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHH
Confidence 45799999987654443211 11222222333 224568999999999999999888754 47999999999999999
Q ss_pred hccccCCC------------------------------cE-EEEEeeccCCccCCCCCCCceeEEEE-------------
Q 009871 117 THKDFTET------------------------------RV-STFVCDLISDDLSRQISPSSIDIVTM------------- 152 (523)
Q Consensus 117 ~~~~~~~~------------------------------~v-~~~~~d~~~~~~~~~~~~~~fD~V~~------------- 152 (523)
++...... ++ .+.++|+.+.....+...++||+|++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 176 (265)
T 2i62_A 97 KWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPA 176 (265)
T ss_dssp HHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHH
T ss_pred HHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHH
Confidence 87643211 27 89999998753211122389999999
Q ss_pred --------ccccccceeeec------ceEEecCCe-EEEeeCHHHHHHHHHhCCCcEEEEEeEe
Q 009871 153 --------ERLTGKDQKISE------NFYVRGDGT-RAFYFSNDFLTSLFKENGFDVEELGLCC 201 (523)
Q Consensus 153 --------~~~~~~~~~~~~------~~~~~~~g~-~~~~~~~~~l~~ll~~~Gf~~~~~~~~~ 201 (523)
.+++++++.+.- .++..+++. ..+.++.+++.++|+++||.++.+....
T Consensus 177 ~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 177 YRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 223344443321 112222222 1224588999999999999998877654
No 44
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.48 E-value=1.5e-13 Score=126.90 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=86.1
Q ss_pred CCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE---
Q 009871 76 RKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM--- 152 (523)
Q Consensus 76 ~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~--- 152 (523)
+.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++. .+++++++|+.++ ++++++||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~----~~~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTH----PSVTFHHGTITDL----SDSPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC----TTSEEECCCGGGG----GGSCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC----CCCeEEeCccccc----ccCCCCeEEEEehhh
Confidence 789999999999999999988 557999999999999999874 4689999999876 567899999999
Q ss_pred ----------------ccccccceeeecceEEecC-------CeEEEeeCHHHHHHHHHhCCCcEEEEEeEe
Q 009871 153 ----------------ERLTGKDQKISENFYVRGD-------GTRAFYFSNDFLTSLFKENGFDVEELGLCC 201 (523)
Q Consensus 153 ----------------~~~~~~~~~~~~~~~~~~~-------g~~~~~~~~~~l~~ll~~~Gf~~~~~~~~~ 201 (523)
.+.+++++.+.-....... ....++++.+++.++|+++||+++.+....
T Consensus 112 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 112 LIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDP 183 (203)
T ss_dssp STTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECT
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecC
Confidence 1222333322211000000 111235689999999999999998876543
No 45
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.48 E-value=1.3e-13 Score=132.05 Aligned_cols=145 Identities=21% Similarity=0.183 Sum_probs=109.2
Q ss_pred cccccchhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceE
Q 009871 312 TGLMLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLI 391 (523)
Q Consensus 312 ~G~~~W~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~ 391 (523)
.|.-.++++..+.+++.... .++.+|||+|||+|.++..+++.++ +|+++|+++.+++.+++|+..|+.. +.
T Consensus 99 fgtg~~~tt~~~~~~l~~~~--~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~-----v~ 170 (254)
T 2nxc_A 99 FGTGHHETTRLALKALARHL--RPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVR-----PR 170 (254)
T ss_dssp ---CCSHHHHHHHHHHHHHC--CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCC-----CE
T ss_pred ccCCCCHHHHHHHHHHHHhc--CCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCc-----EE
Confidence 34445677777777776542 4788999999999988888888777 9999999999999999999998763 45
Q ss_pred EEeeecCCCCcchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHH
Q 009871 392 TKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLS 471 (523)
Q Consensus 392 ~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~ 471 (523)
+...++.+ .++.++||+|+++-+. +.+..+++.+.++| +|||.++++.... ...+.+.+
T Consensus 171 ~~~~d~~~--------~~~~~~fD~Vv~n~~~---~~~~~~l~~~~~~L---------kpgG~lils~~~~-~~~~~v~~ 229 (254)
T 2nxc_A 171 FLEGSLEA--------ALPFGPFDLLVANLYA---ELHAALAPRYREAL---------VPGGRALLTGILK-DRAPLVRE 229 (254)
T ss_dssp EEESCHHH--------HGGGCCEEEEEEECCH---HHHHHHHHHHHHHE---------EEEEEEEEEEEEG-GGHHHHHH
T ss_pred EEECChhh--------cCcCCCCCEEEECCcH---HHHHHHHHHHHHHc---------CCCCEEEEEeecc-CCHHHHHH
Confidence 54433321 1234689999987322 34678899999999 6799999976653 34567888
Q ss_pred HHHHcCCEEEEEcC
Q 009871 472 AATQCGFRLVDKWP 485 (523)
Q Consensus 472 ~~~~~gf~~~~~~~ 485 (523)
.+++.||++.++..
T Consensus 230 ~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 230 AMAGAGFRPLEEAA 243 (254)
T ss_dssp HHHHTTCEEEEEEE
T ss_pred HHHHCCCEEEEEec
Confidence 89999999988754
No 46
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.48 E-value=8.5e-14 Score=133.18 Aligned_cols=123 Identities=15% Similarity=0.185 Sum_probs=88.8
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEE
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+.|++.|+++.... .+++++++|+..+ ++++++||+|
T Consensus 89 l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~----~~~~~~fD~v 162 (254)
T 1xtp_A 89 LPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETA----TLPPNTYDLI 162 (254)
T ss_dssp STTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGC----CCCSSCEEEE
T ss_pred hcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHC----CCCCCCeEEE
Confidence 344578899999999999999998885 457999999999999999976433 6799999999877 5677899999
Q ss_pred EE-------------------ccccccceeeecceEE-ecCC------eEEEeeCHHHHHHHHHhCCCcEEEEEe
Q 009871 151 TM-------------------ERLTGKDQKISENFYV-RGDG------TRAFYFSNDFLTSLFKENGFDVEELGL 199 (523)
Q Consensus 151 ~~-------------------~~~~~~~~~~~~~~~~-~~~g------~~~~~~~~~~l~~ll~~~Gf~~~~~~~ 199 (523)
++ .+.+++++.+.-.... ...+ ...++++.+++.++|+++||+++++..
T Consensus 163 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 163 VIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 99 1222333332210000 0000 011245889999999999999887654
No 47
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.47 E-value=5.9e-13 Score=127.80 Aligned_cols=107 Identities=16% Similarity=0.175 Sum_probs=85.1
Q ss_pred CCCCeEEEECCCccHHHHHHHhcC---CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGS---ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 410 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~---~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~ 410 (523)
.+|.+|||||||+|.++..++... ..+|+++|+|+.||+.|++++...+.. .++.+...|..+ ++
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~---~~v~~~~~D~~~---------~~ 136 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP---TPVDVIEGDIRD---------IA 136 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS---SCEEEEESCTTT---------CC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC---ceEEEeeccccc---------cc
Confidence 478899999999998888888763 348999999999999999999876654 467776655433 23
Q ss_pred CCCccEEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 411 NEGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 411 ~~~fD~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
.++||+|+++.++++.. ....+++.+.++| +|||.++++...
T Consensus 137 ~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~L---------kpGG~lii~e~~ 180 (261)
T 4gek_A 137 IENASMVVLNFTLQFLEPSERQALLDKIYQGL---------NPGGALVLSEKF 180 (261)
T ss_dssp CCSEEEEEEESCGGGSCHHHHHHHHHHHHHHE---------EEEEEEEEEEEB
T ss_pred ccccccceeeeeeeecCchhHhHHHHHHHHHc---------CCCcEEEEEecc
Confidence 45799999998887754 3457899999999 779999987654
No 48
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.47 E-value=2.8e-13 Score=126.49 Aligned_cols=134 Identities=10% Similarity=0.165 Sum_probs=100.2
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCC-CEEEEEcCChHHHHHHHHHHHhcCCCC-CCCceEEEeeecCCCCcchhhhhhcC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPP-FLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~-~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
.++.+|||||||+|.++..++..++ .+|+++|+|+.+++.+++|+..++... ...++.+...|.... +...
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-------~~~~ 100 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ-------DKRF 100 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC-------CGGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc-------cccC
Confidence 3677999999999999888888754 699999999999999999988766531 012577776665332 1224
Q ss_pred CCccEEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC--------------------CChhHH
Q 009871 412 EGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ--------------------VDEPSM 469 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~--------------------~~~~~~ 469 (523)
++||+|+++.++++.. ....+++.+.++| +|||.+++...... .+..++
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L---------kpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (217)
T 3jwh_A 101 HGYDAATVIEVIEHLDLSRLGAFERVLFEFA---------QPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQF 171 (217)
T ss_dssp CSCSEEEEESCGGGCCHHHHHHHHHHHHTTT---------CCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHH
T ss_pred CCcCEEeeHHHHHcCCHHHHHHHHHHHHHHc---------CCCEEEEEccCcccchhhcccccccccccccccccCHHHH
Confidence 6899999999999876 4488999999999 67997766543210 134455
Q ss_pred H----HHHHHcCCEEEEE
Q 009871 470 L----SAATQCGFRLVDK 483 (523)
Q Consensus 470 ~----~~~~~~gf~~~~~ 483 (523)
. +.++++||++...
T Consensus 172 ~~~~~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 172 QNWANKITERFAYNVQFQ 189 (217)
T ss_dssp HHHHHHHHHHSSEEEEEC
T ss_pred HHHHHHHHHHcCceEEEE
Confidence 5 7778999998655
No 49
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.47 E-value=2.2e-13 Score=126.01 Aligned_cols=143 Identities=17% Similarity=0.157 Sum_probs=110.7
Q ss_pred ccchhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEe
Q 009871 315 MLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKR 394 (523)
Q Consensus 315 ~~W~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ 394 (523)
..++.+..+.+++.... .++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++|+..++.. .+.+..
T Consensus 42 ~~~~~~~~~~~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~v~~~~ 115 (205)
T 3grz_A 42 GNHQTTQLAMLGIERAM--VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIY----DIALQK 115 (205)
T ss_dssp CCHHHHHHHHHHHHHHC--SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC----CCEEEE
T ss_pred CCCccHHHHHHHHHHhc--cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEe
Confidence 35677777777776543 367899999999998888888877779999999999999999999988764 266766
Q ss_pred eecCCCCcchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHH
Q 009871 395 LEWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAAT 474 (523)
Q Consensus 395 ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~ 474 (523)
.|+.+. .+++||+|+++.++. .+..+++.+.++| +|+|.++++.... .....+.+.++
T Consensus 116 ~d~~~~---------~~~~fD~i~~~~~~~---~~~~~l~~~~~~L---------~~gG~l~~~~~~~-~~~~~~~~~~~ 173 (205)
T 3grz_A 116 TSLLAD---------VDGKFDLIVANILAE---ILLDLIPQLDSHL---------NEDGQVIFSGIDY-LQLPKIEQALA 173 (205)
T ss_dssp SSTTTT---------CCSCEEEEEEESCHH---HHHHHGGGSGGGE---------EEEEEEEEEEEEG-GGHHHHHHHHH
T ss_pred cccccc---------CCCCceEEEECCcHH---HHHHHHHHHHHhc---------CCCCEEEEEecCc-ccHHHHHHHHH
Confidence 666432 246899999985442 3567778888888 6799999875553 24567888899
Q ss_pred HcCCEEEEEcC
Q 009871 475 QCGFRLVDKWP 485 (523)
Q Consensus 475 ~~gf~~~~~~~ 485 (523)
+.||++.++..
T Consensus 174 ~~Gf~~~~~~~ 184 (205)
T 3grz_A 174 ENSFQIDLKMR 184 (205)
T ss_dssp HTTEEEEEEEE
T ss_pred HcCCceEEeec
Confidence 99999988754
No 50
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.47 E-value=3.4e-13 Score=125.69 Aligned_cols=70 Identities=27% Similarity=0.139 Sum_probs=60.6
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
..++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|++. ...+++++++|+.++ +++++||+|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~---~~~~~~~~~~d~~~~-----~~~~~~D~v~~ 113 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRH---GLDNVEFRQQDLFDW-----TPDRQWDAVFF 113 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGG---CCTTEEEEECCTTSC-----CCSSCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhc---CCCCeEEEecccccC-----CCCCceeEEEE
Confidence 356679999999999999999998 66899999999999999983 226799999999865 45789999999
No 51
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.47 E-value=3.2e-13 Score=129.43 Aligned_cols=121 Identities=14% Similarity=0.210 Sum_probs=88.2
Q ss_pred cCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCceeE
Q 009871 72 SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDI 149 (523)
Q Consensus 72 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~ 149 (523)
...++.+|||||||+|..+..+++.++. +|+|+|+|+.|++.|+++.... ..+++++++|+.++ ++++++||+
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~fD~ 117 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL----PFQNEELDL 117 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC----SSCTTCEEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC----CCCCCCEEE
Confidence 3456789999999999999999999764 8999999999999999976433 24599999999877 677899999
Q ss_pred EEEccc---cccceeeec-ceEEecCCeEEE------------------------eeCHHHHHHHHHhCCCcEEEE
Q 009871 150 VTMERL---TGKDQKISE-NFYVRGDGTRAF------------------------YFSNDFLTSLFKENGFDVEEL 197 (523)
Q Consensus 150 V~~~~~---~~~~~~~~~-~~~~~~~g~~~~------------------------~~~~~~l~~ll~~~Gf~~~~~ 197 (523)
|++... ......+.. ...++++|.+++ +++.+++.++++++||+++..
T Consensus 118 v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (257)
T 3f4k_A 118 IWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAH 193 (257)
T ss_dssp EEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEE
T ss_pred EEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 999110 000000000 013445554432 236789999999999998764
No 52
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.47 E-value=2.4e-13 Score=124.82 Aligned_cols=146 Identities=16% Similarity=0.169 Sum_probs=95.3
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCCCcee
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
.+...++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++.... ..++++.++|+.++ ++ +++||
T Consensus 27 ~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~~-~~~~D 99 (199)
T 2xvm_A 27 AVKVVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNL----TF-DRQYD 99 (199)
T ss_dssp HTTTSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGC----CC-CCCEE
T ss_pred HhhccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhC----CC-CCCce
Confidence 344456789999999999999999988 668999999999999999876432 24799999999876 45 78999
Q ss_pred EEEEc---cccccc--e-eeec-ceEEecCCeEE-----------------EeeCHHHHHHHHHhCCCcEEEEEeEeeee
Q 009871 149 IVTME---RLTGKD--Q-KISE-NFYVRGDGTRA-----------------FYFSNDFLTSLFKENGFDVEELGLCCKQV 204 (523)
Q Consensus 149 ~V~~~---~~~~~~--~-~~~~-~~~~~~~g~~~-----------------~~~~~~~l~~ll~~~Gf~~~~~~~~~~~~ 204 (523)
+|++. ...... . .+.. ...++++|.++ +.++.+++.++|++ |+++.........
T Consensus 100 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~~~~~~ 177 (199)
T 2xvm_A 100 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNEDVGEL 177 (199)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEECCEEEE
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEecccceEE
Confidence 99991 110100 0 0000 01234444432 24588999999985 9988776543333
Q ss_pred eec-ccCccceeEEEEEEEEe
Q 009871 205 ENR-ARELVMNRRWVQAVFCS 224 (523)
Q Consensus 205 ~~~-~~~~~~~r~~~~~~~~~ 224 (523)
... ..+......|.....+|
T Consensus 178 ~~~~~~g~~~~~~~~~~~arK 198 (199)
T 2xvm_A 178 HRTDANGNRIKLRFATMLARK 198 (199)
T ss_dssp EEECTTSCEEEEEEEEEEEEC
T ss_pred EeecCCCCeeeEEEEEEEEec
Confidence 222 22333334455555554
No 53
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.47 E-value=8.9e-13 Score=133.29 Aligned_cols=174 Identities=14% Similarity=0.136 Sum_probs=124.1
Q ss_pred CceEEEEEEcCceEEEEEecccccccCCCcccccchhHHHHHHHHhcCC--CCCCCCeEEEECCCccHHHHHHHhcCCCE
Q 009871 283 DNEMIEVNLRDRSFKIEVLSKEYQHTCRSTGLMLWESAHLMAAVLARNP--TIVAGKKVLELGCGCGGICSMVAAGSADL 360 (523)
Q Consensus 283 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~G~~~W~~a~~la~~l~~~~--~~~~~~~VLElG~G~G~l~~~~a~~~~~~ 360 (523)
.+....+.+.+..+++...++.+... .+.+++..+.+.+.... ...++.+|||+|||+|.++..++..+ .+
T Consensus 185 ~w~~~~~~~~g~~~~~~~~pgvFs~~------~~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g-~~ 257 (381)
T 3dmg_A 185 LWRAFSARILGAEYTFHHLPGVFSAG------KVDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMG-AE 257 (381)
T ss_dssp CCEEEEEEETTEEEEEEECTTCTTTT------SCCHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTT-CE
T ss_pred ccceeeEEecCceEEEEeCCCceeCC------CCCHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcC-CE
Confidence 34667788888889998777665322 23456666666665432 23477899999999999988888885 48
Q ss_pred EEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCccEEEEccccCC-----CCChHHHHHH
Q 009871 361 VVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYI-----PEAILPLFAT 435 (523)
Q Consensus 361 V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~-----~~~~~~l~~~ 435 (523)
|+++|+|+.+++.+++|+..|+.. +.+...|+.+.. ...++||+|+++.++++ .+....+++.
T Consensus 258 V~gvDis~~al~~A~~n~~~~~~~-----v~~~~~D~~~~~-------~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~ 325 (381)
T 3dmg_A 258 VVGVEDDLASVLSLQKGLEANALK-----AQALHSDVDEAL-------TEEARFDIIVTNPPFHVGGAVILDVAQAFVNV 325 (381)
T ss_dssp EEEEESBHHHHHHHHHHHHHTTCC-----CEEEECSTTTTS-------CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCC-----eEEEEcchhhcc-------ccCCCeEEEEECCchhhcccccHHHHHHHHHH
Confidence 999999999999999999998763 455555554321 12368999999888776 4567789999
Q ss_pred HHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHH-H------HHcCCEEEEEcC
Q 009871 436 AKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSA-A------TQCGFRLVDKWP 485 (523)
Q Consensus 436 l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~-~------~~~gf~~~~~~~ 485 (523)
+.++| +|||.++++.... ......++. . ++.||++.+...
T Consensus 326 ~~~~L---------kpGG~l~iv~n~~-l~~~~~l~~~f~~v~~l~~~gF~Vl~a~~ 372 (381)
T 3dmg_A 326 AAARL---------RPGGVFFLVSNPF-LKYEPLLEEKFGAFQTLKVAEYKVLFAEK 372 (381)
T ss_dssp HHHHE---------EEEEEEEEEECTT-SCHHHHHHHHHSCCEEEEESSSEEEEEEC
T ss_pred HHHhc---------CcCcEEEEEEcCC-CChHHHHHHhhccEEEEeCCCEEEEEEEE
Confidence 99999 6799999876543 233222222 1 456777776655
No 54
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.47 E-value=2.8e-13 Score=132.90 Aligned_cols=123 Identities=15% Similarity=0.079 Sum_probs=89.1
Q ss_pred cCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCceeE
Q 009871 72 SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDI 149 (523)
Q Consensus 72 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~ 149 (523)
...++.+|||||||+|..+..+++.+ +++|+|+|+|+.|++.|+++.... ..++++.++|+.++ ++++++||+
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~fD~ 153 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI----PCEDNSYDF 153 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC----SSCTTCEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC----CCCCCCEeE
Confidence 44678899999999999999999875 468999999999999999876432 35799999999987 677899999
Q ss_pred EEE-----------------ccccccceeeecceEEecCCe-------------EEEeeCHHHHHHHHHhCCCcEEEEEe
Q 009871 150 VTM-----------------ERLTGKDQKISENFYVRGDGT-------------RAFYFSNDFLTSLFKENGFDVEELGL 199 (523)
Q Consensus 150 V~~-----------------~~~~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~l~~ll~~~Gf~~~~~~~ 199 (523)
|++ .+.+++++.+.-......+.. ...+.+.+++.++++++||+++.+..
T Consensus 154 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 233 (297)
T 2o57_A 154 IWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFS 233 (297)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEEE
Confidence 999 222333333221111111100 00123788999999999999877654
No 55
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.47 E-value=7.4e-13 Score=131.24 Aligned_cols=145 Identities=11% Similarity=0.084 Sum_probs=111.7
Q ss_pred hHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecC
Q 009871 319 SAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWG 398 (523)
Q Consensus 319 ~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~ 398 (523)
+...+.+.+.......++.+|||+|||+|.++..++.....+|+++|+|+.+++.+++++..++.. .++.+...|+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~ 150 (318)
T 2fk8_A 74 AQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTN---RSRQVLLQGWE 150 (318)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCS---SCEEEEESCGG
T ss_pred HHHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC---CceEEEECChH
Confidence 344556666666666788999999999998888888773348999999999999999999887664 45666655543
Q ss_pred CCCcchhhhhhcCCCccEEEEccccCCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCC------------
Q 009871 399 NRDHIEAIKEENNEGFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQV------------ 464 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~fD~Ii~~d~~y~~--~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~------------ 464 (523)
+ + +++||+|++..++++. +....+++.+.++| +|||.+++.......
T Consensus 151 ~---------~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~ 211 (318)
T 2fk8_A 151 D---------F-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIM---------PADGRMTVQSSVSYHPYEMAARGKKLS 211 (318)
T ss_dssp G---------C-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHS---------CTTCEEEEEEEECCCHHHHHTTCHHHH
T ss_pred H---------C-CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhc---------CCCcEEEEEEeccCCchhhhhcccccc
Confidence 2 1 2689999999999886 68899999999999 779999987655321
Q ss_pred ---------------------ChhHHHHHHHHcCCEEEEEcC
Q 009871 465 ---------------------DEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 465 ---------------------~~~~~~~~~~~~gf~~~~~~~ 485 (523)
+...+.+.+++.||++.++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~ 253 (318)
T 2fk8_A 212 FETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPEPLS 253 (318)
T ss_dssp HHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCCCEE
T ss_pred ccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEEEEe
Confidence 234566778889998876543
No 56
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.47 E-value=7.2e-13 Score=122.23 Aligned_cols=125 Identities=10% Similarity=0.113 Sum_probs=100.2
Q ss_pred CCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCcc
Q 009871 336 GKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFE 415 (523)
Q Consensus 336 ~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD 415 (523)
+.+|||+|||+|.++..++..+. +|+++|+++.+++.++++. .++.+...|+.+. ++.+++||
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-------~~~~~~fD 104 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH---------PSVTFHHGTITDL-------SDSPKRWA 104 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC---------TTSEEECCCGGGG-------GGSCCCEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC---------CCCeEEeCccccc-------ccCCCCeE
Confidence 67999999999988888888854 7999999999999998872 2455555544321 24467999
Q ss_pred EEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC--------------CChhHHHHHHHHcCCE
Q 009871 416 VILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ--------------VDEPSMLSAATQCGFR 479 (523)
Q Consensus 416 ~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~--------------~~~~~~~~~~~~~gf~ 479 (523)
+|++..++++.. ....+++.+.++| +|||.+++...... .+...+.+.++++||+
T Consensus 105 ~v~~~~~l~~~~~~~~~~~l~~~~~~L---------~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 175 (203)
T 3h2b_A 105 GLLAWYSLIHMGPGELPDALVALRMAV---------EDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQ 175 (203)
T ss_dssp EEEEESSSTTCCTTTHHHHHHHHHHTE---------EEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEE
T ss_pred EEEehhhHhcCCHHHHHHHHHHHHHHc---------CCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCc
Confidence 999999998864 8999999999999 67999998775432 3467788999999999
Q ss_pred EEEEcCC
Q 009871 480 LVDKWPS 486 (523)
Q Consensus 480 ~~~~~~~ 486 (523)
+.++...
T Consensus 176 ~~~~~~~ 182 (203)
T 3h2b_A 176 VTSSHWD 182 (203)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9988653
No 57
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.46 E-value=1.8e-13 Score=130.29 Aligned_cols=112 Identities=13% Similarity=0.102 Sum_probs=85.6
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE-
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM- 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~- 152 (523)
.++.+|||||||+|.++..+++.++ +|+|+|+|+.|++.|+++... +++++++|+.++ +++++||+|++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~-----~~~~~fD~v~~~ 110 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKD---GITYIHSRFEDA-----QLPRRYDNIVLT 110 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGC-----CCSSCEEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHc-----CcCCcccEEEEh
Confidence 4567899999999999999998865 599999999999999987642 799999999865 35789999999
Q ss_pred ----------------c-cccccceeeecceEEecCC---------------------------eEEEeeCHHHHHHHHH
Q 009871 153 ----------------E-RLTGKDQKISENFYVRGDG---------------------------TRAFYFSNDFLTSLFK 188 (523)
Q Consensus 153 ----------------~-~~~~~~~~~~~~~~~~~~g---------------------------~~~~~~~~~~l~~ll~ 188 (523)
. +.+++++.+.- ..++. ....+++.+++.++++
T Consensus 111 ~~l~~~~~~~~~l~~~~~~~LkpgG~l~i---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 187 (250)
T 2p7i_A 111 HVLEHIDDPVALLKRINDDWLAEGGRLFL---VCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDAS 187 (250)
T ss_dssp SCGGGCSSHHHHHHHHHHTTEEEEEEEEE---EEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHH
T ss_pred hHHHhhcCHHHHHHHHHHHhcCCCCEEEE---EcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHH
Confidence 3 45455544331 11110 0112468999999999
Q ss_pred hCCCcEEEEE
Q 009871 189 ENGFDVEELG 198 (523)
Q Consensus 189 ~~Gf~~~~~~ 198 (523)
++||+++++.
T Consensus 188 ~~Gf~~~~~~ 197 (250)
T 2p7i_A 188 RAGLQVTYRS 197 (250)
T ss_dssp HTTCEEEEEE
T ss_pred HCCCeEEEEe
Confidence 9999987764
No 58
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.46 E-value=1.4e-13 Score=125.75 Aligned_cols=112 Identities=14% Similarity=0.153 Sum_probs=88.3
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.+++|+..++. .++.+...|+.+. ...+...+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~v~~~~~d~~~~-----~~~~~~~~ 113 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL----SGATLRRGAVAAV-----VAAGTTSP 113 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC----SCEEEEESCHHHH-----HHHCCSSC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC----CceEEEEccHHHH-----HhhccCCC
Confidence 47889999999999888878888878999999999999999999999876 3566666554321 11233579
Q ss_pred ccEEEEccccCCC-CChHHHHHHHHH--HhhccCCCCCCCCCcEEEEEEeecC
Q 009871 414 FEVILGTDVSYIP-EAILPLFATAKE--LTASSNKSLREDQQPAFILCHIFRQ 463 (523)
Q Consensus 414 fD~Ii~~d~~y~~-~~~~~l~~~l~~--ll~~~~~~~~~~~~g~~~l~~~~r~ 463 (523)
||+|+++.+.+.. +....++..+.+ +| +|+|.+++.+..+.
T Consensus 114 fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L---------~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 114 VDLVLADPPYNVDSADVDAILAALGTNGWT---------REGTVAVVERATTC 157 (189)
T ss_dssp CSEEEECCCTTSCHHHHHHHHHHHHHSSSC---------CTTCEEEEEEETTS
T ss_pred ccEEEECCCCCcchhhHHHHHHHHHhcCcc---------CCCeEEEEEecCCC
Confidence 9999997664443 678889999988 89 78999999877643
No 59
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.46 E-value=1.4e-12 Score=118.82 Aligned_cols=164 Identities=16% Similarity=0.206 Sum_probs=114.2
Q ss_pred CCceEEEEEEcCceEEEEEecccccccCCCcccccchhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEE
Q 009871 282 EDNEMIEVNLRDRSFKIEVLSKEYQHTCRSTGLMLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLV 361 (523)
Q Consensus 282 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~G~~~W~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V 361 (523)
.....+...+.+..+.+......+... .....+..+.+.+ ...++.+|||+|||+|.++..++.. ..+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~----~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v 77 (194)
T 1dus_A 9 SDVKIVEDILRGKKLKFKTDSGVFSYG------KVDKGTKILVENV----VVDKDDDILDLGCGYGVIGIALADE-VKST 77 (194)
T ss_dssp CCEEEEEEEETTEEEEEEEETTSTTTT------SCCHHHHHHHHHC----CCCTTCEEEEETCTTSHHHHHHGGG-SSEE
T ss_pred ccccEEeeecCCCceEEEeCCCcCCcc------ccchHHHHHHHHc----ccCCCCeEEEeCCCCCHHHHHHHHc-CCeE
Confidence 445666677788888776544333210 0112333344433 3347789999999999888888877 6789
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCccEEEEccccCC-CCChHHHHHHHHHHh
Q 009871 362 VATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYI-PEAILPLFATAKELT 440 (523)
Q Consensus 362 ~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~-~~~~~~l~~~l~~ll 440 (523)
+++|+++.+++.+++|+..++... .++.+...|+.+. ...++||+|+++.++++ ......+++.+.++|
T Consensus 78 ~~~D~~~~~~~~a~~~~~~~~~~~--~~~~~~~~d~~~~--------~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L 147 (194)
T 1dus_A 78 TMADINRRAIKLAKENIKLNNLDN--YDIRVVHSDLYEN--------VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELL 147 (194)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTT--SCEEEEECSTTTT--------CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCc--cceEEEECchhcc--------cccCCceEEEECCCcccchhHHHHHHHHHHHHc
Confidence 999999999999999999876631 1477777766543 12468999999876655 356788999999999
Q ss_pred hccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHc
Q 009871 441 ASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQC 476 (523)
Q Consensus 441 ~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~ 476 (523)
+|+|.+++....+. ....+.+.+++.
T Consensus 148 ---------~~gG~l~~~~~~~~-~~~~~~~~l~~~ 173 (194)
T 1dus_A 148 ---------KDNGEIWVVIQTKQ-GAKSLAKYMKDV 173 (194)
T ss_dssp ---------EEEEEEEEEEESTH-HHHHHHHHHHHH
T ss_pred ---------CCCCEEEEEECCCC-ChHHHHHHHHHH
Confidence 67999998876642 233466666665
No 60
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.46 E-value=4.7e-13 Score=128.64 Aligned_cols=125 Identities=18% Similarity=0.170 Sum_probs=90.3
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCCCcee
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
.+...++.+|||||||+|.++..+++.++ +|+|+|+|+.|++.|+++.... ..++.+.++|+.++ ++++++||
T Consensus 32 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l----~~~~~~fD 105 (260)
T 1vl5_A 32 IAALKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM----PFTDERFH 105 (260)
T ss_dssp HHTCCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC----CSCTTCEE
T ss_pred HhCCCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC----CCCCCCEE
Confidence 34446788999999999999999998864 7999999999999999876433 25799999999987 67789999
Q ss_pred EEEE-----------------ccccccceeeecceEEecC----------------CeEEEeeCHHHHHHHHHhCCCcEE
Q 009871 149 IVTM-----------------ERLTGKDQKISENFYVRGD----------------GTRAFYFSNDFLTSLFKENGFDVE 195 (523)
Q Consensus 149 ~V~~-----------------~~~~~~~~~~~~~~~~~~~----------------g~~~~~~~~~~l~~ll~~~Gf~~~ 195 (523)
+|++ .+.+++++.+.-.....++ .....+++.+++.++|+++||.++
T Consensus 106 ~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 185 (260)
T 1vl5_A 106 IVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELE 185 (260)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEE
T ss_pred EEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEE
Confidence 9999 2333444433211111111 011223578899999999999987
Q ss_pred EEEeE
Q 009871 196 ELGLC 200 (523)
Q Consensus 196 ~~~~~ 200 (523)
.+...
T Consensus 186 ~~~~~ 190 (260)
T 1vl5_A 186 ELHCF 190 (260)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 76554
No 61
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.46 E-value=1e-12 Score=128.32 Aligned_cols=158 Identities=11% Similarity=0.117 Sum_probs=96.8
Q ss_pred HHHHHHHHhcccccc-c--chhhhHHHHhhhhcC--CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHh
Q 009871 43 KYWDLFYKRHQDRFF-K--DRHYLDKEWGRYFSG--AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMT 117 (523)
Q Consensus 43 ~~Wd~~y~~~~~~f~-~--~~~~l~~~~~~~~~~--~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~ 117 (523)
.||+.+|........ . ...+....+.+.+.. .++.+|||||||+|..+..++. .++.+|+|+|+|+.|++.|++
T Consensus 34 ~y~~~~y~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~-~~~~~v~gvD~s~~~l~~a~~ 112 (289)
T 2g72_A 34 AYLRNNYAPPRGDLCNPNGVGPWKLRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSAC-SHFEDITMTDFLEVNRQELGR 112 (289)
T ss_dssp HHHHHHHSTTTTCCSSTTSHHHHHHHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGG-GGCSEEEEECSCHHHHHHHHH
T ss_pred HHHHHHhcCcccchhhhhHHHHHHHHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhc-cCCCeEEEeCCCHHHHHHHHH
Confidence 567777765332211 0 122333444444422 3678999999999995543333 335689999999999999988
Q ss_pred ccccCC-------------------------------CcEEEEEeeccC-CccCC-CCCCCceeEEEE------------
Q 009871 118 HKDFTE-------------------------------TRVSTFVCDLIS-DDLSR-QISPSSIDIVTM------------ 152 (523)
Q Consensus 118 ~~~~~~-------------------------------~~v~~~~~d~~~-~~~~~-~~~~~~fD~V~~------------ 152 (523)
+..... ..+.++++|+.+ +.++. .+++++||+|++
T Consensus 113 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~ 192 (289)
T 2g72_A 113 WLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLA 192 (289)
T ss_dssp HHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHH
T ss_pred HHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHH
Confidence 542110 015677889886 42211 245678999999
Q ss_pred ---------ccccccceeeec------ceEEecCCeE-EEeeCHHHHHHHHHhCCCcEEEEEeEe
Q 009871 153 ---------ERLTGKDQKISE------NFYVRGDGTR-AFYFSNDFLTSLFKENGFDVEELGLCC 201 (523)
Q Consensus 153 ---------~~~~~~~~~~~~------~~~~~~~g~~-~~~~~~~~l~~ll~~~Gf~~~~~~~~~ 201 (523)
.+++++++.+.- .++..+++.. ..+++.+++.++|+++||.++.+....
T Consensus 193 ~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 193 SFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 233445544331 1122222222 235699999999999999998876554
No 62
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.46 E-value=4.5e-13 Score=127.14 Aligned_cols=130 Identities=18% Similarity=0.255 Sum_probs=102.4
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++.+|||||||+|.++..++..+..+|+++|+++.+++.++++... .++.+...|..+. +++.++
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~d~~~~-------~~~~~~ 107 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD-------TGITYERADLDKL-------HLPQDS 107 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS-------SSEEEEECCGGGC-------CCCTTC
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc-------CCceEEEcChhhc-------cCCCCC
Confidence 46789999999999888888888665999999999999999876543 2456665554432 133568
Q ss_pred ccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-----------------------C-------
Q 009871 414 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-----------------------Q------- 463 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r-----------------------~------- 463 (523)
||+|+++.++++......+++.+.++| +|||.+++..... .
T Consensus 108 fD~v~~~~~l~~~~~~~~~l~~~~~~L---------~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (243)
T 3bkw_A 108 FDLAYSSLALHYVEDVARLFRTVHQAL---------SPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPR 178 (243)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHE---------EEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEE
T ss_pred ceEEEEeccccccchHHHHHHHHHHhc---------CcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccce
Confidence 999999999999889999999999999 6799998865320 0
Q ss_pred -------------CChhHHHHHHHHcCCEEEEEcCC
Q 009871 464 -------------VDEPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 464 -------------~~~~~~~~~~~~~gf~~~~~~~~ 486 (523)
.+..++.+.++++||++.++...
T Consensus 179 ~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 179 KTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp CTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred eeeeccCceEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 13466788899999999988664
No 63
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.46 E-value=7.3e-14 Score=136.24 Aligned_cols=120 Identities=14% Similarity=0.190 Sum_probs=87.1
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++....+ .+++++++|+.++. ++++++||+|++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~~fD~v~~ 142 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA---SHLETPVDLILF 142 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG---GGCSSCEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh---hhcCCCceEEEE
Confidence 4679999999999999999988 6789999999999999999764332 57999999998762 256789999999
Q ss_pred -----------------ccccccceeeecceEEe-------------------------cCCeEEEeeCHHHHHHHHHhC
Q 009871 153 -----------------ERLTGKDQKISENFYVR-------------------------GDGTRAFYFSNDFLTSLFKEN 190 (523)
Q Consensus 153 -----------------~~~~~~~~~~~~~~~~~-------------------------~~g~~~~~~~~~~l~~ll~~~ 190 (523)
.+++++++.+.-..... .......+++.+++.++++++
T Consensus 143 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 222 (285)
T 4htf_A 143 HAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEA 222 (285)
T ss_dssp ESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHT
T ss_pred CchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHC
Confidence 22333443332110000 000011346889999999999
Q ss_pred CCcEEEEEe
Q 009871 191 GFDVEELGL 199 (523)
Q Consensus 191 Gf~~~~~~~ 199 (523)
||+++++..
T Consensus 223 Gf~v~~~~~ 231 (285)
T 4htf_A 223 GWQIMGKTG 231 (285)
T ss_dssp TCEEEEEEE
T ss_pred CCceeeeee
Confidence 999876653
No 64
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.45 E-value=2.2e-13 Score=130.44 Aligned_cols=124 Identities=16% Similarity=0.173 Sum_probs=88.6
Q ss_pred hhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCC
Q 009871 68 GRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPS 145 (523)
Q Consensus 68 ~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~ 145 (523)
...+...++.+|||||||+|..+..+++.. +.+|+|+|+|+.|++.|+++....+ .++++.++|+.++ ++ ++
T Consensus 29 ~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~----~~-~~ 102 (256)
T 1nkv_A 29 GRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY----VA-NE 102 (256)
T ss_dssp HHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC----CC-SS
T ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC----Cc-CC
Confidence 344455678899999999999999999886 6689999999999999998764332 4799999999876 45 78
Q ss_pred ceeEEEE---c-cccccceeeec-ceEEecCCeEEE-------------------------eeCHHHHHHHHHhCCCcEE
Q 009871 146 SIDIVTM---E-RLTGKDQKISE-NFYVRGDGTRAF-------------------------YFSNDFLTSLFKENGFDVE 195 (523)
Q Consensus 146 ~fD~V~~---~-~~~~~~~~~~~-~~~~~~~g~~~~-------------------------~~~~~~l~~ll~~~Gf~~~ 195 (523)
+||+|++ . .+......+.. ...++++|.+++ +++.+++.++++++||.++
T Consensus 103 ~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 182 (256)
T 1nkv_A 103 KCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVV 182 (256)
T ss_dssp CEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCC
T ss_pred CCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeE
Confidence 9999998 0 01000000000 013444444332 3467899999999999976
Q ss_pred EE
Q 009871 196 EL 197 (523)
Q Consensus 196 ~~ 197 (523)
.+
T Consensus 183 ~~ 184 (256)
T 1nkv_A 183 EM 184 (256)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 65
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.45 E-value=1.4e-12 Score=131.83 Aligned_cols=149 Identities=15% Similarity=0.131 Sum_probs=105.7
Q ss_pred eEEEEEEcCceEEEEEecccccccCCCcccccchhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcC-CCEEEE
Q 009871 285 EMIEVNLRDRSFKIEVLSKEYQHTCRSTGLMLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS-ADLVVA 363 (523)
Q Consensus 285 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~G~~~W~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~ 363 (523)
....+.+.+..+++...++.+.... +..++ +++.......++.+|||+|||+|.++..++..+ ..+|++
T Consensus 182 ~~~~~~~~~~~~~~~~~pg~Fs~~~------~d~~~----~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~g 251 (375)
T 4dcm_A 182 QTVSWKLEGTDWTIHNHANVFSRTG------LDIGA----RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVF 251 (375)
T ss_dssp SCEEEEETTTTEEEEECTTCTTCSS------CCHHH----HHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEE
T ss_pred CceEEEecCCceEEEeCCCcccCCc------ccHHH----HHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEE
Confidence 3456778888899987776654322 22333 334444444456899999999999999998886 569999
Q ss_pred EcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCccEEEEccccCCC-----CChHHHHHHHHH
Q 009871 364 TDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIP-----EAILPLFATAKE 438 (523)
Q Consensus 364 ~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~-----~~~~~l~~~l~~ 438 (523)
+|+|+.+++.+++|+..|++.. ..++.+...|..+ .+++++||+|+++.+++.. .....+++.+.+
T Consensus 252 vD~s~~al~~Ar~n~~~ngl~~-~~~v~~~~~D~~~--------~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~ 322 (375)
T 4dcm_A 252 VDESPMAVASSRLNVETNMPEA-LDRCEFMINNALS--------GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARR 322 (375)
T ss_dssp EESCHHHHHHHHHHHHHHCGGG-GGGEEEEECSTTT--------TCCTTCEEEEEECCCC-------CCHHHHHHHHHHH
T ss_pred EECcHHHHHHHHHHHHHcCCCc-CceEEEEechhhc--------cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHH
Confidence 9999999999999999988641 1235555444433 2345689999999887642 233478999999
Q ss_pred HhhccCCCCCCCCCcEEEEEEee
Q 009871 439 LTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 439 ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
+| +|||.++++...
T Consensus 323 ~L---------kpgG~l~iv~n~ 336 (375)
T 4dcm_A 323 CL---------KINGELYIVANR 336 (375)
T ss_dssp HE---------EEEEEEEEEEET
T ss_pred hC---------CCCcEEEEEEEC
Confidence 99 679999987644
No 66
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.45 E-value=1.9e-12 Score=119.63 Aligned_cols=125 Identities=6% Similarity=0.059 Sum_probs=98.3
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 410 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~ 410 (523)
...++.+|||+|||+|.++..++..+ ..+|+++|+++.+++.+++|+..++. .++.+...|+.+. .. .
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~v~~~~~d~~~~--~~-----~ 105 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA----RNVTLVEAFAPEG--LD-----D 105 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC----TTEEEEECCTTTT--CT-----T
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC----CcEEEEeCChhhh--hh-----c
Confidence 44578899999999999988888886 46999999999999999999998876 3566666665432 11 1
Q ss_pred CCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEE
Q 009871 411 NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRL 480 (523)
Q Consensus 411 ~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~ 480 (523)
..+||+|++..+.+ ....+++.+.++| +|||.+++..... .....+.+.+++.||.+
T Consensus 106 ~~~~D~i~~~~~~~---~~~~~l~~~~~~L---------kpgG~l~~~~~~~-~~~~~~~~~l~~~g~~~ 162 (204)
T 3e05_A 106 LPDPDRVFIGGSGG---MLEEIIDAVDRRL---------KSEGVIVLNAVTL-DTLTKAVEFLEDHGYMV 162 (204)
T ss_dssp SCCCSEEEESCCTT---CHHHHHHHHHHHC---------CTTCEEEEEECBH-HHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEECCCCc---CHHHHHHHHHHhc---------CCCeEEEEEeccc-ccHHHHHHHHHHCCCce
Confidence 25799999986654 7889999999999 7799999876542 23456788889999854
No 67
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.45 E-value=5e-13 Score=127.79 Aligned_cols=135 Identities=8% Similarity=0.004 Sum_probs=105.1
Q ss_pred cCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhh
Q 009871 329 RNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKE 408 (523)
Q Consensus 329 ~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~ 408 (523)
......++.+|||||||+|.++..++..+..+|+++|+++.+++.+++++..+ .++.+...|+.+. +
T Consensus 87 ~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~-------~ 153 (254)
T 1xtp_A 87 ASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM------PVGKFILASMETA-------T 153 (254)
T ss_dssp HTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS------SEEEEEESCGGGC-------C
T ss_pred HhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC------CceEEEEccHHHC-------C
Confidence 33344578899999999998888888877678999999999999999887543 3566666655432 2
Q ss_pred hcCCCccEEEEccccCCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec--------------CCChhHHHHH
Q 009871 409 ENNEGFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFR--------------QVDEPSMLSA 472 (523)
Q Consensus 409 ~~~~~fD~Ii~~d~~y~~--~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r--------------~~~~~~~~~~ 472 (523)
+++++||+|++..++++. .....+++.+.++| +|||.+++..... ..+...+.+.
T Consensus 154 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L---------kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (254)
T 1xtp_A 154 LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQAL---------TPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRL 224 (254)
T ss_dssp CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHE---------EEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHH
T ss_pred CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhc---------CCCeEEEEEecCCCcccceecccCCcccCCHHHHHHH
Confidence 345689999999999887 55889999999999 6799999876421 1234678888
Q ss_pred HHHcCCEEEEEcC
Q 009871 473 ATQCGFRLVDKWP 485 (523)
Q Consensus 473 ~~~~gf~~~~~~~ 485 (523)
++++||++.++..
T Consensus 225 l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 225 FNESGVRVVKEAF 237 (254)
T ss_dssp HHHHTCCEEEEEE
T ss_pred HHHCCCEEEEeee
Confidence 9999999988765
No 68
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.45 E-value=1.4e-12 Score=120.74 Aligned_cols=145 Identities=14% Similarity=0.122 Sum_probs=99.8
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE-
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM- 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~- 152 (523)
.++.+|||+|||+|..+..++.. ++.+|+|+|+|+.|++.|+++......++++.++|+.++ ++++++||+|++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~~~~~fD~v~~~ 96 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKL----PFKDESMSFVYSY 96 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSC----CSCTTCEEEEEEC
T ss_pred CCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhC----CCCCCceeEEEEc
Confidence 46789999999999985544433 367899999999999999987654446789999999877 667889999998
Q ss_pred ------------------ccccccceeeecceEEe---------------------cCCeEEEeeCHHHHHHHHHhCCCc
Q 009871 153 ------------------ERLTGKDQKISENFYVR---------------------GDGTRAFYFSNDFLTSLFKENGFD 193 (523)
Q Consensus 153 ------------------~~~~~~~~~~~~~~~~~---------------------~~g~~~~~~~~~~l~~ll~~~Gf~ 193 (523)
.+.+++++.+.-..+.. ..+....+++.+++.++|...||.
T Consensus 97 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~ 176 (209)
T 2p8j_A 97 GTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVL 176 (209)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEE
T ss_pred ChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCce
Confidence 22233343332111111 111233577999999999999987
Q ss_pred EEEEEeEeeeeeecccCccceeEEEEEEEEecCC
Q 009871 194 VEELGLCCKQVENRARELVMNRRWVQAVFCSSGG 227 (523)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 227 (523)
..+..... ...++..+.+.|....+.+..+
T Consensus 177 ~~~~~~~~----~~~~g~~~~~~f~~~~~~~~~~ 206 (209)
T 2p8j_A 177 FKEDRVVE----RINDGLKIKQGYVDYIAEKFSK 206 (209)
T ss_dssp EEEEEEEE----EEETTEEEEEEEEEEEEECCCC
T ss_pred eeeeeeee----hhhcCCcccceeeeeehhhhhh
Confidence 76543221 1244555567888877777643
No 69
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.44 E-value=1.6e-12 Score=120.22 Aligned_cols=128 Identities=9% Similarity=0.045 Sum_probs=98.4
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
...++.+|||||||+|.++..++.. ..+|+++|+++.+++.+++|++.++.. .++.+...|..+. +. ..
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~---~~v~~~~~d~~~~--~~-----~~ 120 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLS---PRMRAVQGTAPAA--LA-----DL 120 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEESCTTGG--GT-----TS
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCC---CCEEEEeCchhhh--cc-----cC
Confidence 3457889999999999888888888 678999999999999999999998774 3566665554321 11 12
Q ss_pred CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEcC
Q 009871 412 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
..||+|++...+ ... +++.+.++| +|||.+++.... ..+...+.+.+++.|+++..+..
T Consensus 121 ~~~D~v~~~~~~----~~~-~l~~~~~~L---------kpgG~lv~~~~~-~~~~~~~~~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 121 PLPEAVFIGGGG----SQA-LYDRLWEWL---------APGTRIVANAVT-LESETLLTQLHARHGGQLLRIDI 179 (204)
T ss_dssp CCCSEEEECSCC----CHH-HHHHHHHHS---------CTTCEEEEEECS-HHHHHHHHHHHHHHCSEEEEEEE
T ss_pred CCCCEEEECCcc----cHH-HHHHHHHhc---------CCCcEEEEEecC-cccHHHHHHHHHhCCCcEEEEEe
Confidence 479999987533 455 999999999 779999987654 23345678888999999888643
No 70
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.44 E-value=8e-13 Score=125.38 Aligned_cols=136 Identities=15% Similarity=0.125 Sum_probs=105.5
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCc
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 402 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~ 402 (523)
+.+++.... .++.+|||||||+|.++..++..+ .+|+++|+++.+++.++++.. ..++.+...|..+.
T Consensus 43 ~~~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~-- 110 (242)
T 3l8d_A 43 IIPFFEQYV--KKEAEVLDVGCGDGYGTYKLSRTG-YKAVGVDISEVMIQKGKERGE-------GPDLSFIKGDLSSL-- 110 (242)
T ss_dssp HHHHHHHHS--CTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHTTTC-------BTTEEEEECBTTBC--
T ss_pred HHHHHHHHc--CCCCeEEEEcCCCCHHHHHHHHcC-CeEEEEECCHHHHHHHHhhcc-------cCCceEEEcchhcC--
Confidence 344444433 267899999999998888888875 489999999999999987641 14567776666543
Q ss_pred chhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-------------------
Q 009871 403 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ------------------- 463 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~------------------- 463 (523)
++++++||+|++..++++......+++.+.++| +|||.+++......
T Consensus 111 -----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L---------~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (242)
T 3l8d_A 111 -----PFENEQFEAIMAINSLEWTEEPLRALNEIKRVL---------KSDGYACIAILGPTAKPRENSYPRLYGKDVVCN 176 (242)
T ss_dssp -----SSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHE---------EEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSC
T ss_pred -----CCCCCCccEEEEcChHhhccCHHHHHHHHHHHh---------CCCeEEEEEEcCCcchhhhhhhhhhcccccccc
Confidence 234579999999999999999999999999999 67999998874321
Q ss_pred -CChhHHHHHHHHcCCEEEEEc
Q 009871 464 -VDEPSMLSAATQCGFRLVDKW 484 (523)
Q Consensus 464 -~~~~~~~~~~~~~gf~~~~~~ 484 (523)
.+...+.+.++++||++.+..
T Consensus 177 ~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 177 TMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEE
T ss_pred CCCHHHHHHHHHHcCCEEEEee
Confidence 233567888999999998864
No 71
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.44 E-value=1.3e-12 Score=123.87 Aligned_cols=79 Identities=16% Similarity=0.162 Sum_probs=65.8
Q ss_pred HhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCc
Q 009871 67 WGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSS 146 (523)
Q Consensus 67 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 146 (523)
+..+++..++.+|||||||+|..+..+++... .+|+|+|+|+.|++.|+++... .++++.++|+..+ ++++++
T Consensus 35 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~d~~~~----~~~~~~ 107 (243)
T 3bkw_A 35 LRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPD--TGITYERADLDKL----HLPQDS 107 (243)
T ss_dssp HHHHSCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCS--SSEEEEECCGGGC----CCCTTC
T ss_pred HHHhccccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhccc--CCceEEEcChhhc----cCCCCC
Confidence 34455556788999999999999999998832 2899999999999999987643 4699999999876 566889
Q ss_pred eeEEEE
Q 009871 147 IDIVTM 152 (523)
Q Consensus 147 fD~V~~ 152 (523)
||+|++
T Consensus 108 fD~v~~ 113 (243)
T 3bkw_A 108 FDLAYS 113 (243)
T ss_dssp EEEEEE
T ss_pred ceEEEE
Confidence 999999
No 72
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.44 E-value=2.5e-13 Score=126.57 Aligned_cols=129 Identities=14% Similarity=0.195 Sum_probs=92.4
Q ss_pred HhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCC
Q 009871 67 WGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPS 145 (523)
Q Consensus 67 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~ 145 (523)
|.+.++ .++.+|||||||+|.++..+++.+|+.+|+|+|+|+.|++.|+++....+ .++.++++|+.++ +..++++
T Consensus 34 ~~~~f~-~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~ 110 (214)
T 1yzh_A 34 WRDLFG-NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDL--TDYFEDG 110 (214)
T ss_dssp HHHHHT-SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCG--GGTSCTT
T ss_pred HHHHcC-CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHH--HhhcCCC
Confidence 333444 46789999999999999999999988999999999999999999764332 5899999999864 2226678
Q ss_pred ceeEEEEc---ccccc---------ceeeec-ceEEecCCeEEEee----CHHHHHHHHHhCCCcEEEEE
Q 009871 146 SIDIVTME---RLTGK---------DQKISE-NFYVRGDGTRAFYF----SNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 146 ~fD~V~~~---~~~~~---------~~~~~~-~~~~~~~g~~~~~~----~~~~l~~ll~~~Gf~~~~~~ 198 (523)
+||+|++. ...+. ...+.. ...++++|.+.+.. ..+++.+++.++||..+.+.
T Consensus 111 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 111 EIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp CCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeecc
Confidence 99999991 11000 000000 12578888877644 23566788888999876553
No 73
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.44 E-value=1.1e-12 Score=122.77 Aligned_cols=124 Identities=11% Similarity=0.091 Sum_probs=86.4
Q ss_pred hhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 69 ~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
+.+....+.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++ .++.+.++|+.++......++++||
T Consensus 46 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 46 LAILGRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp HHHHHTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred HHhhcCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCCCcc
Confidence 3333356799999999999999999988 66899999999999999987 3467888887754221123345699
Q ss_pred EEEE----------------ccccccceeeecceE--------------Ee------c---CCeEEEeeCHHHHHHHHHh
Q 009871 149 IVTM----------------ERLTGKDQKISENFY--------------VR------G---DGTRAFYFSNDFLTSLFKE 189 (523)
Q Consensus 149 ~V~~----------------~~~~~~~~~~~~~~~--------------~~------~---~g~~~~~~~~~~l~~ll~~ 189 (523)
+|++ .+.+++++.+.-... .. . .+...++++.+++.++|++
T Consensus 119 ~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (227)
T 3e8s_A 119 LICANFALLHQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDM 198 (227)
T ss_dssp EEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHH
T ss_pred EEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHH
Confidence 9999 223333333321000 00 0 1234456699999999999
Q ss_pred CCCcEEEEEe
Q 009871 190 NGFDVEELGL 199 (523)
Q Consensus 190 ~Gf~~~~~~~ 199 (523)
+||+++++..
T Consensus 199 aGf~~~~~~~ 208 (227)
T 3e8s_A 199 AGLRLVSLQE 208 (227)
T ss_dssp TTEEEEEEEC
T ss_pred cCCeEEEEec
Confidence 9999987754
No 74
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.44 E-value=2.4e-13 Score=136.20 Aligned_cols=111 Identities=15% Similarity=0.126 Sum_probs=89.9
Q ss_pred HHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcch
Q 009871 325 AVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIE 404 (523)
Q Consensus 325 ~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~ 404 (523)
+.|.++...++|++|||||||+|.++.++|+.|+.+|+++|.|+ +++.|+++++.|++. .+|.+...+..+.+
T Consensus 73 ~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~---~~i~~i~~~~~~~~--- 145 (376)
T 4hc4_A 73 LGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLE---DRVHVLPGPVETVE--- 145 (376)
T ss_dssp HHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCT---TTEEEEESCTTTCC---
T ss_pred HHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCC---ceEEEEeeeeeeec---
Confidence 45666666789999999999999888888888999999999986 889999999999986 67887766654431
Q ss_pred hhhhhcCCCccEEEE---ccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEE
Q 009871 405 AIKEENNEGFEVILG---TDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFI 456 (523)
Q Consensus 405 ~~~~~~~~~fD~Ii~---~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~ 456 (523)
+ +++||+||+ ...+.+...++.++....++| +|+|.++
T Consensus 146 ----l-pe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~L---------kp~G~~i 186 (376)
T 4hc4_A 146 ----L-PEQVDAIVSEWMGYGLLHESMLSSVLHARTKWL---------KEGGLLL 186 (376)
T ss_dssp ----C-SSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHE---------EEEEEEE
T ss_pred ----C-CccccEEEeecccccccccchhhhHHHHHHhhC---------CCCceEC
Confidence 2 468999998 345666788999999999999 5576655
No 75
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.43 E-value=5.6e-13 Score=126.15 Aligned_cols=68 Identities=12% Similarity=0.187 Sum_probs=59.2
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
.++.+|||||||+|.++..+++.++ +|+|+|+|+.|++.|+++. .+++++++|+.++ ++ +++||+|+|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~----~~~~~~~~d~~~~----~~-~~~~D~v~~ 106 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL----PDATLHQGDMRDF----RL-GRKFSAVVS 106 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC----TTCEEEECCTTTC----CC-SSCEEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC----CCCEEEECCHHHc----cc-CCCCcEEEE
Confidence 4678999999999999999999864 7999999999999999874 4589999999876 44 678999995
No 76
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.43 E-value=1.5e-12 Score=123.05 Aligned_cols=142 Identities=18% Similarity=0.131 Sum_probs=108.0
Q ss_pred HHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCC
Q 009871 322 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 401 (523)
Q Consensus 322 ~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~ 401 (523)
.+.+++.... .++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++++..++.. .++.+...|+.+..
T Consensus 55 ~l~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~~ 128 (235)
T 3lcc_A 55 LIVHLVDTSS--LPLGRALVPGCGGGHDVVAMASPE-RFVVGLDISESALAKANETYGSSPKA---EYFSFVKEDVFTWR 128 (235)
T ss_dssp HHHHHHHTTC--SCCEEEEEETCTTCHHHHHHCBTT-EEEEEECSCHHHHHHHHHHHTTSGGG---GGEEEECCCTTTCC
T ss_pred HHHHHHHhcC--CCCCCEEEeCCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHHHhhccCCC---cceEEEECchhcCC
Confidence 4555554432 244599999999998887776654 57999999999999999998764332 46777777766531
Q ss_pred cchhhhhhcCCCccEEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec---------CCChhHHH
Q 009871 402 HIEAIKEENNEGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFR---------QVDEPSML 470 (523)
Q Consensus 402 ~~~~~~~~~~~~fD~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r---------~~~~~~~~ 470 (523)
+..+||+|+++.++++.. ....+++.+.++| +|||.+++..... ..+...+.
T Consensus 129 --------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (235)
T 3lcc_A 129 --------PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELL---------KPDGELITLMYPITDHVGGPPYKVDVSTFE 191 (235)
T ss_dssp --------CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHE---------EEEEEEEEEECCCSCCCSCSSCCCCHHHHH
T ss_pred --------CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHC---------CCCcEEEEEEecccccCCCCCccCCHHHHH
Confidence 245899999999998866 8899999999999 6799988765432 13456788
Q ss_pred HHHHHcCCEEEEEcCC
Q 009871 471 SAATQCGFRLVDKWPS 486 (523)
Q Consensus 471 ~~~~~~gf~~~~~~~~ 486 (523)
+.++++||++.++...
T Consensus 192 ~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 192 EVLVPIGFKAVSVEEN 207 (235)
T ss_dssp HHHGGGTEEEEEEEEC
T ss_pred HHHHHcCCeEEEEEec
Confidence 8899999999887553
No 77
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.43 E-value=9.9e-13 Score=122.12 Aligned_cols=133 Identities=16% Similarity=0.160 Sum_probs=101.5
Q ss_pred HHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCC
Q 009871 322 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 401 (523)
Q Consensus 322 ~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~ 401 (523)
.+..++... .++.+|||||||+|.++..++..+ .+|+++|+++.+++.+++++. +.+...+..+.
T Consensus 33 ~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~----------~~~~~~d~~~~- 97 (211)
T 3e23_A 33 TLTKFLGEL---PAGAKILELGCGAGYQAEAMLAAG-FDVDATDGSPELAAEASRRLG----------RPVRTMLFHQL- 97 (211)
T ss_dssp HHHHHHTTS---CTTCEEEESSCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHT----------SCCEECCGGGC-
T ss_pred HHHHHHHhc---CCCCcEEEECCCCCHHHHHHHHcC-CeEEEECCCHHHHHHHHHhcC----------CceEEeeeccC-
Confidence 344554332 367899999999998888888875 489999999999999998871 12222232221
Q ss_pred cchhhhhhcCCCccEEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-------------CCh
Q 009871 402 HIEAIKEENNEGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------VDE 466 (523)
Q Consensus 402 ~~~~~~~~~~~~fD~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-------------~~~ 466 (523)
+ ..++||+|+++.++++.. ....+++.+.++| +|||.++++..... .+.
T Consensus 98 ------~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 161 (211)
T 3e23_A 98 ------D-AIDAYDAVWAHACLLHVPRDELADVLKLIWRAL---------KPGGLFYASYKSGEGEGRDKLARYYNYPSE 161 (211)
T ss_dssp ------C-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHE---------EEEEEEEEEEECCSSCEECTTSCEECCCCH
T ss_pred ------C-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhc---------CCCcEEEEEEcCCCcccccccchhccCCCH
Confidence 1 357899999999998876 7889999999999 67999998865532 355
Q ss_pred hHHHHHHHHcC-CEEEEEcC
Q 009871 467 PSMLSAATQCG-FRLVDKWP 485 (523)
Q Consensus 467 ~~~~~~~~~~g-f~~~~~~~ 485 (523)
..+.+.++++| |++.++..
T Consensus 162 ~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 162 EWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp HHHHHHHHHHCCCSEEEEEE
T ss_pred HHHHHHHHhCCCcEEEEEEe
Confidence 67889999999 99988754
No 78
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.43 E-value=1.2e-13 Score=133.09 Aligned_cols=141 Identities=11% Similarity=0.039 Sum_probs=100.8
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCC-------------------------C
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPF-------------------------L 387 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~-------------------------~ 387 (523)
..++.+|||||||+|.++.++++.++.+|+++|+|+.|++.|++++..+..... .
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 457889999999999777777777777899999999999999998876532100 0
Q ss_pred CceE-EEeeecCCCCcchhhhhhcCCCccEEEEccccCC-C---CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 009871 388 AKLI-TKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYI-P---EAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 462 (523)
Q Consensus 388 ~~v~-~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~-~---~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r 462 (523)
..+. +...|..+...+ .+...++||+|+++-++++ . +.+..+++.+.++| +|||.++++....
T Consensus 133 ~~i~~~~~~D~~~~~~~---~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~L---------KPGG~li~~~~~~ 200 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPL---APAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLL---------KPGGHLVTTVTLR 200 (263)
T ss_dssp HHEEEEEECCTTSSSTT---TTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTE---------EEEEEEEEEEESS
T ss_pred hhhheEEeccccCCCCC---CccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHc---------CCCcEEEEEEeec
Confidence 1122 444444432111 1112458999999988865 2 34567888888999 7799999986322
Q ss_pred --------------CCChhHHHHHHHHcCCEEEEEcC
Q 009871 463 --------------QVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 463 --------------~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
..+.+.+.+.++++||++.++..
T Consensus 201 ~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 201 LPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp CCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred CccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEee
Confidence 13566788999999999988865
No 79
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.43 E-value=1e-12 Score=125.58 Aligned_cols=103 Identities=17% Similarity=0.339 Sum_probs=72.8
Q ss_pred hHHHHHHHHhcccccccchhhhHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc
Q 009871 42 KKYWDLFYKRHQDRFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF 121 (523)
Q Consensus 42 ~~~Wd~~y~~~~~~f~~~~~~l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~ 121 (523)
..||+.+|............++...+.. ....++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++...
T Consensus 9 a~~yd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~ 85 (252)
T 1wzn_A 9 AEYYDTIYRRRIERVKAEIDFVEEIFKE-DAKREVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKE 85 (252)
T ss_dssp GGGHHHHTHHHHHTHHHHHHHHHHHHHH-TCSSCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcchhhhHHHHHHHHHHHHH-hcccCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHh
Confidence 4566666554221111112233322222 22246789999999999999999987 56899999999999999998754
Q ss_pred CCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 122 TETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 122 ~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
.+.++.++++|+.++ ++ +++||+|++
T Consensus 86 ~~~~v~~~~~d~~~~----~~-~~~fD~v~~ 111 (252)
T 1wzn_A 86 RNLKIEFLQGDVLEI----AF-KNEFDAVTM 111 (252)
T ss_dssp TTCCCEEEESCGGGC----CC-CSCEEEEEE
T ss_pred cCCceEEEECChhhc----cc-CCCccEEEE
Confidence 455799999999876 33 368999996
No 80
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.42 E-value=3.7e-13 Score=125.81 Aligned_cols=111 Identities=25% Similarity=0.331 Sum_probs=85.4
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEEc
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTME 153 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (523)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++.. .+++++++|+.++ +++ ++||+|++.
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~----~~~-~~fD~v~~~ 113 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSF----EVP-TSIDTIVST 113 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSC----CCC-SCCSEEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhc----CCC-CCeEEEEEC
Confidence 57889999999999999999988 6789999999999999998764 5789999999876 555 899999990
Q ss_pred ----c--------ccccceeeecceEEecCCeEEE----------------------------------eeCHHHHHHHH
Q 009871 154 ----R--------LTGKDQKISENFYVRGDGTRAF----------------------------------YFSNDFLTSLF 187 (523)
Q Consensus 154 ----~--------~~~~~~~~~~~~~~~~~g~~~~----------------------------------~~~~~~l~~ll 187 (523)
. ++....+ .++++|.++. +++.+++.++|
T Consensus 114 ~~l~~~~~~~~~~~l~~~~~-----~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 188 (220)
T 3hnr_A 114 YAFHHLTDDEKNVAIAKYSQ-----LLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIF 188 (220)
T ss_dssp SCGGGSCHHHHHHHHHHHHH-----HSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHH
T ss_pred cchhcCChHHHHHHHHHHHH-----hcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHH
Confidence 0 1111111 3444554432 34779999999
Q ss_pred HhCCCcEEEEEe
Q 009871 188 KENGFDVEELGL 199 (523)
Q Consensus 188 ~~~Gf~~~~~~~ 199 (523)
+++||+++....
T Consensus 189 ~~aGf~v~~~~~ 200 (220)
T 3hnr_A 189 ENNGFHVTFTRL 200 (220)
T ss_dssp HHTTEEEEEEEC
T ss_pred HHCCCEEEEeec
Confidence 999998766643
No 81
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.42 E-value=1.2e-12 Score=124.20 Aligned_cols=126 Identities=17% Similarity=0.124 Sum_probs=91.5
Q ss_pred hhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCCCce
Q 009871 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 69 ~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
+.+...++.+|||||||+|..+..+++.+ .+|+|+|+|+.|++.|+++.... ..++++.++|+..+ ++++++|
T Consensus 15 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~~~~~~f 88 (239)
T 1xxl_A 15 KTAECRAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL----PFPDDSF 88 (239)
T ss_dssp HHHTCCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC----CSCTTCE
T ss_pred HHhCcCCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC----CCCCCcE
Confidence 34555788999999999999999999885 47999999999999999876432 25799999999877 6778999
Q ss_pred eEEEE-----------------ccccccceeeecceEEec----------------CCeEEEeeCHHHHHHHHHhCCCcE
Q 009871 148 DIVTM-----------------ERLTGKDQKISENFYVRG----------------DGTRAFYFSNDFLTSLFKENGFDV 194 (523)
Q Consensus 148 D~V~~-----------------~~~~~~~~~~~~~~~~~~----------------~g~~~~~~~~~~l~~ll~~~Gf~~ 194 (523)
|+|++ .+.+++++.+.-.....+ ++....+++.+++.++|+++||.+
T Consensus 89 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~ 168 (239)
T 1xxl_A 89 DIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAY 168 (239)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEE
T ss_pred EEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcE
Confidence 99999 223334433321100010 111123458899999999999998
Q ss_pred EEEEeE
Q 009871 195 EELGLC 200 (523)
Q Consensus 195 ~~~~~~ 200 (523)
+.+...
T Consensus 169 ~~~~~~ 174 (239)
T 1xxl_A 169 QDIQKW 174 (239)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 766543
No 82
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.42 E-value=9.5e-13 Score=125.16 Aligned_cols=125 Identities=11% Similarity=0.100 Sum_probs=99.4
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++.+|||||||+|.++..++..+. +|+++|+|+.+++.++++... ++.+...|..+. .++++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~--------~v~~~~~d~~~~--------~~~~~ 103 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD--------GITYIHSRFEDA--------QLPRR 103 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS--------CEEEEESCGGGC--------CCSSC
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC--------CeEEEEccHHHc--------CcCCc
Confidence 3677999999999988888887765 799999999999999886432 455555444322 23568
Q ss_pred ccEEEEccccCCCCChHHHHHHHH-HHhhccCCCCCCCCCcEEEEEEeecC-----------------------------
Q 009871 414 FEVILGTDVSYIPEAILPLFATAK-ELTASSNKSLREDQQPAFILCHIFRQ----------------------------- 463 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~~~~l~~~l~-~ll~~~~~~~~~~~~g~~~l~~~~r~----------------------------- 463 (523)
||+|++..++++..+...+++.+. ++| +|||.+++....+.
T Consensus 104 fD~v~~~~~l~~~~~~~~~l~~~~~~~L---------kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (250)
T 2p7i_A 104 YDNIVLTHVLEHIDDPVALLKRINDDWL---------AEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHR 174 (250)
T ss_dssp EEEEEEESCGGGCSSHHHHHHHHHHTTE---------EEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCC
T ss_pred ccEEEEhhHHHhhcCHHHHHHHHHHHhc---------CCCCEEEEEcCChHHHHHHHHHHcCccccchhccccccccccc
Confidence 999999999999989999999999 999 67999998774321
Q ss_pred --CChhHHHHHHHHcCCEEEEEc
Q 009871 464 --VDEPSMLSAATQCGFRLVDKW 484 (523)
Q Consensus 464 --~~~~~~~~~~~~~gf~~~~~~ 484 (523)
.+...+.+.++++||++.++.
T Consensus 175 ~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 175 CTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCHHHHHHHHHHCCCeEEEEe
Confidence 244577888999999998874
No 83
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.42 E-value=1.6e-12 Score=125.74 Aligned_cols=126 Identities=21% Similarity=0.140 Sum_probs=92.8
Q ss_pred hhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCc
Q 009871 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSS 146 (523)
Q Consensus 69 ~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~ 146 (523)
+.++..++.+|||||||+|..+..+++.. +++|+|+|+|+.|++.|+++.... ..++++.++|+.++ ++++++
T Consensus 55 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~ 129 (273)
T 3bus_A 55 ALLDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL----PFEDAS 129 (273)
T ss_dssp HHSCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC----CSCTTC
T ss_pred HhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC----CCCCCC
Confidence 34455678899999999999999999876 678999999999999999876432 24799999999877 677889
Q ss_pred eeEEEE-----------------ccccccceeeecceEEecCCe----------------EEEeeCHHHHHHHHHhCCCc
Q 009871 147 IDIVTM-----------------ERLTGKDQKISENFYVRGDGT----------------RAFYFSNDFLTSLFKENGFD 193 (523)
Q Consensus 147 fD~V~~-----------------~~~~~~~~~~~~~~~~~~~g~----------------~~~~~~~~~l~~ll~~~Gf~ 193 (523)
||+|++ .+++++++.+.-......+.. ...+++.+++.++++++||+
T Consensus 130 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 209 (273)
T 3bus_A 130 FDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELV 209 (273)
T ss_dssp EEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCE
T ss_pred ccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCe
Confidence 999998 333444444332111111100 11235789999999999999
Q ss_pred EEEEEe
Q 009871 194 VEELGL 199 (523)
Q Consensus 194 ~~~~~~ 199 (523)
++.+..
T Consensus 210 ~~~~~~ 215 (273)
T 3bus_A 210 VTSTVD 215 (273)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 876654
No 84
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.42 E-value=1.3e-12 Score=123.99 Aligned_cols=125 Identities=14% Similarity=0.106 Sum_probs=87.2
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
.++.+|||||||+|..+..++...++.+|+|+|+|+.|++.|+++....+ .+++++++|+.++.++ +..+++||+|++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR-KDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC-TTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc-ccccCCccEEEE
Confidence 36789999999999999999987778899999999999999999764332 4699999999865211 011578999999
Q ss_pred ccccccceeeec-ceEEecCCeEEEee---C---HHHHHHHHHhCCCcEEEEEe
Q 009871 153 ERLTGKDQKISE-NFYVRGDGTRAFYF---S---NDFLTSLFKENGFDVEELGL 199 (523)
Q Consensus 153 ~~~~~~~~~~~~-~~~~~~~g~~~~~~---~---~~~l~~ll~~~Gf~~~~~~~ 199 (523)
..+......+.. ...++++|.++++. . .+++.+.+++.||.+..+..
T Consensus 148 ~~~~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 148 RAVARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp ECCSCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred eccCCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEE
Confidence 222110000000 11567777776543 2 23467778899998876643
No 85
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.42 E-value=1.6e-12 Score=127.28 Aligned_cols=74 Identities=18% Similarity=0.223 Sum_probs=62.4
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCC-CCCceeEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQI-SPSSIDIV 150 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~-~~~~fD~V 150 (523)
.++.+|||||||+|..+..+++.. ..+|+|+|+|+.|++.|+++..... .++.++++|+.+. ++ ++++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~~fD~v 137 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR----HMDLGKEFDVI 137 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS----CCCCSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc----ccCCCCCcCEE
Confidence 567899999999999999988773 4589999999999999999764332 4689999999876 45 57899999
Q ss_pred EE
Q 009871 151 TM 152 (523)
Q Consensus 151 ~~ 152 (523)
++
T Consensus 138 ~~ 139 (298)
T 1ri5_A 138 SS 139 (298)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 86
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.41 E-value=2.5e-12 Score=121.35 Aligned_cols=131 Identities=16% Similarity=0.218 Sum_probs=101.2
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
..++.+|||+|||+|.++..++... ..+|+++|+|+.+++.+++++..++ ++.+...|..+.. . .
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~d~~~~~-------~-~ 107 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL------KVKYIEADYSKYD-------F-E 107 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT------TEEEEESCTTTCC-------C-C
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC------CEEEEeCchhccC-------C-C
Confidence 4577899999999999888888875 5689999999999999998865432 5677666655431 1 2
Q ss_pred CCccEEEEccccCCCCChH--HHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC--------------------------
Q 009871 412 EGFEVILGTDVSYIPEAIL--PLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------------------- 463 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~--~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-------------------------- 463 (523)
++||+|+++.++++..... .+++.+.++| +|||.++++.....
T Consensus 108 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (234)
T 3dtn_A 108 EKYDMVVSALSIHHLEDEDKKELYKRSYSIL---------KESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEE 178 (234)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHE---------EEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHH
T ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHHhc---------CCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHH
Confidence 6899999999998876444 5999999999 67999998764321
Q ss_pred -------------CChhHHHHHHHHcCCEEEEEcCC
Q 009871 464 -------------VDEPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 464 -------------~~~~~~~~~~~~~gf~~~~~~~~ 486 (523)
.+.+++.+.++++||+..+++..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~ 214 (234)
T 3dtn_A 179 IAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYK 214 (234)
T ss_dssp HHTTC----CCCCCBHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHhcccccccCHHHHHHHHHHcCCCceeeeee
Confidence 12245566889999999888653
No 87
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.41 E-value=7.7e-13 Score=122.87 Aligned_cols=124 Identities=14% Similarity=0.066 Sum_probs=97.0
Q ss_pred CCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC-
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE- 412 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~- 412 (523)
++.+|||+|||+|.++..++..+ ..+|+++|+++.+++.|++|++.|++. .++.+...|+.+. +++.
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~---~~i~~~~~d~l~~--------l~~~~ 83 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK---EKIQVRLANGLAA--------FEETD 83 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT---TTEEEEECSGGGG--------CCGGG
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC---ceEEEEECchhhh--------cccCc
Confidence 67899999999999999999887 458999999999999999999999986 5688877665332 2222
Q ss_pred CccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEE
Q 009871 413 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDK 483 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~ 483 (523)
+||+|+.+.+. ...+..++......| ++++.++++.. ...+.+.+.+.++||.+.+.
T Consensus 84 ~~D~IviaG~G--g~~i~~Il~~~~~~L---------~~~~~lVlq~~---~~~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 84 QVSVITIAGMG--GRLIARILEEGLGKL---------ANVERLILQPN---NREDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp CCCEEEEEEEC--HHHHHHHHHHTGGGC---------TTCCEEEEEES---SCHHHHHHHHHHTTEEEEEE
T ss_pred CCCEEEEcCCC--hHHHHHHHHHHHHHh---------CCCCEEEEECC---CCHHHHHHHHHHCCCEEEEE
Confidence 69988865432 234667777777777 56889888765 36778889999999998765
No 88
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.41 E-value=1.3e-12 Score=122.71 Aligned_cols=112 Identities=14% Similarity=0.182 Sum_probs=89.3
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeecc-CCccCCCCC-CCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLI-SDDLSRQIS-PSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~-~~~~~~~~~-~~~fD~V~ 151 (523)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++. .+++++++|+. .+ +++ +++||+|+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~----~~~~~~~fD~v~ 116 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANA----PHADVYEWNGKGEL----PAGLGAPFGLIV 116 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHC----TTSEEEECCSCSSC----CTTCCCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhC----CCceEEEcchhhcc----CCcCCCCEEEEE
Confidence 46789999999999999999998 678999999999999999872 57899999994 44 566 78999999
Q ss_pred E----ccccccceeeecceEEecCCeEEE---eeCHHHHHHHHHhCCCcEEEEEeE
Q 009871 152 M----ERLTGKDQKISENFYVRGDGTRAF---YFSNDFLTSLFKENGFDVEELGLC 200 (523)
Q Consensus 152 ~----~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~l~~ll~~~Gf~~~~~~~~ 200 (523)
+ ..++....+ .++++|.++. +.+.+++.+.+.++||....+...
T Consensus 117 ~~~~~~~~l~~~~~-----~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 167 (226)
T 3m33_A 117 SRRGPTSVILRLPE-----LAAPDAHFLYVGPRLNVPEVPERLAAVGWDIVAEDHV 167 (226)
T ss_dssp EESCCSGGGGGHHH-----HEEEEEEEEEEESSSCCTHHHHHHHHTTCEEEEEEEE
T ss_pred eCCCHHHHHHHHHH-----HcCCCcEEEEeCCcCCHHHHHHHHHHCCCeEEEEEee
Confidence 9 233333333 5677777653 237789999999999998776543
No 89
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=6.4e-13 Score=129.14 Aligned_cols=121 Identities=16% Similarity=0.227 Sum_probs=87.3
Q ss_pred hhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 69 ~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
+.+...++.+|||||||+|..+..+++ ++.+|+|+|+|+.|++.|+++. .++.+.++|+..+ ++ +++||
T Consensus 51 ~~l~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~----~~-~~~fD 119 (279)
T 3ccf_A 51 QLLNPQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY----PHLHFDVADARNF----RV-DKPLD 119 (279)
T ss_dssp HHHCCCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC----TTSCEEECCTTTC----CC-SSCEE
T ss_pred HHhCCCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC----CCCEEEECChhhC----Cc-CCCcC
Confidence 334446788999999999999999998 4788999999999999999875 5688999999876 44 57899
Q ss_pred EEEE-----------------ccccccceeeecceEEecC----------------------CeEEEeeCHHHHHHHHHh
Q 009871 149 IVTM-----------------ERLTGKDQKISENFYVRGD----------------------GTRAFYFSNDFLTSLFKE 189 (523)
Q Consensus 149 ~V~~-----------------~~~~~~~~~~~~~~~~~~~----------------------g~~~~~~~~~~l~~ll~~ 189 (523)
+|++ .+.+++++.+.-....... ....++++.+++.++|++
T Consensus 120 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 199 (279)
T 3ccf_A 120 AVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEK 199 (279)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHH
T ss_pred EEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHH
Confidence 9999 2333444433211100000 001134578899999999
Q ss_pred CCCcEEEEEeE
Q 009871 190 NGFDVEELGLC 200 (523)
Q Consensus 190 ~Gf~~~~~~~~ 200 (523)
+||+++.+...
T Consensus 200 aGf~~~~~~~~ 210 (279)
T 3ccf_A 200 QGFDVTYAALF 210 (279)
T ss_dssp HTEEEEEEEEE
T ss_pred cCCEEEEEEEe
Confidence 99998776544
No 90
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.41 E-value=2.2e-12 Score=116.10 Aligned_cols=129 Identities=11% Similarity=0.024 Sum_probs=96.5
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 410 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~ 410 (523)
...++.+|||+|||+|.++..++... ..+|+++|+++.+++.+++|+..++.. .++ +...+..+ .+ +..
T Consensus 22 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~~-~~~~d~~~--~~----~~~ 91 (178)
T 3hm2_A 22 APKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVS---DRI-AVQQGAPR--AF----DDV 91 (178)
T ss_dssp CCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCT---TSE-EEECCTTG--GG----GGC
T ss_pred cccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCC---CCE-EEecchHh--hh----hcc
Confidence 34577899999999998888888874 568999999999999999999987764 245 43333221 11 111
Q ss_pred CCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEc
Q 009871 411 NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 484 (523)
Q Consensus 411 ~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~ 484 (523)
.++||+|+++.++++ ..+++.+.++| +|||.+++..... .....+.+.+++.|+++.++.
T Consensus 92 ~~~~D~i~~~~~~~~----~~~l~~~~~~L---------~~gG~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTA----PGVFAAAWKRL---------PVGGRLVANAVTV-ESEQMLWALRKQFGGTISSFA 151 (178)
T ss_dssp CSCCSEEEECC-TTC----TTHHHHHHHTC---------CTTCEEEEEECSH-HHHHHHHHHHHHHCCEEEEEE
T ss_pred CCCCCEEEECCcccH----HHHHHHHHHhc---------CCCCEEEEEeecc-ccHHHHHHHHHHcCCeeEEEE
Confidence 268999999987776 77899999999 7799999876542 234467788888999887763
No 91
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.41 E-value=4.8e-13 Score=128.70 Aligned_cols=141 Identities=11% Similarity=0.030 Sum_probs=103.7
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCC--------------C-----------C
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPP--------------F-----------L 387 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~--------------~-----------~ 387 (523)
..++.+|||||||+|.++..++..+..+|+++|+|+.+++.+++++..+.... . .
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 35788999999999988888887776689999999999999999876542100 0 0
Q ss_pred Cce-EEEeeecCCCCcchhhhhhcCCCccEEEEccccC----CCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee-
Q 009871 388 AKL-ITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSY----IPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF- 461 (523)
Q Consensus 388 ~~v-~~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y----~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~- 461 (523)
.++ .+...|..+..... +...++||+|+++.+++ +......+++.+.++| +|||.+++....
T Consensus 134 ~~v~~~~~~d~~~~~~~~---~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~L---------kpgG~li~~~~~~ 201 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLG---GVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLL---------KPGGFLVMVDALK 201 (265)
T ss_dssp HHEEEEEECCTTSSSTTT---TCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTE---------EEEEEEEEEEESS
T ss_pred hhheeEEEeeeccCCCCC---ccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhC---------CCCcEEEEEecCC
Confidence 125 66666655432110 11226899999999988 5557888999999999 679999887532
Q ss_pred -------------cCCChhHHHHHHHHcCCEEEEEcC
Q 009871 462 -------------RQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 462 -------------r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
+..+.+.+.+.++++||++.++..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 202 SSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp CCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred CceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEE
Confidence 234556788999999999988754
No 92
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.40 E-value=1.1e-12 Score=122.06 Aligned_cols=125 Identities=11% Similarity=0.085 Sum_probs=97.4
Q ss_pred CCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC-C
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN-E 412 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~-~ 412 (523)
++.+|||+|||+|.++..++..+ +.+|+++|+++.+++.|++|++.|++. .++.+...|+.+. +.+ .
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~---~~I~~~~gD~l~~--------~~~~~ 89 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLT---SKIDVRLANGLSA--------FEEAD 89 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCT---TTEEEEECSGGGG--------CCGGG
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEECchhhc--------ccccc
Confidence 67899999999999999999887 458999999999999999999999986 5788877665432 112 3
Q ss_pred CccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEc
Q 009871 413 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 484 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~ 484 (523)
+||+|+.+-+.- +.+..++......| +++|.++++.. ...+.+.+.+.++||.+.+..
T Consensus 90 ~~D~IviaGmGg--~lI~~IL~~~~~~l---------~~~~~lIlqp~---~~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 90 NIDTITICGMGG--RLIADILNNDIDKL---------QHVKTLVLQPN---NREDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp CCCEEEEEEECH--HHHHHHHHHTGGGG---------TTCCEEEEEES---SCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCEEEEeCCch--HHHHHHHHHHHHHh---------CcCCEEEEECC---CChHHHHHHHHHCCCEEEEEE
Confidence 799987553322 44666777776677 56889998874 357788999999999987753
No 93
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.40 E-value=7.5e-13 Score=130.87 Aligned_cols=123 Identities=11% Similarity=0.170 Sum_probs=89.7
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
..++.+|||||||+|.++..+++++ +++|+|+|+|+.|++.|+++....+ .+++++++|+.++ ++++++||+|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~fD~V 189 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT----PFDKGAVTAS 189 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC----CCCTTCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC----CCCCCCEeEE
Confidence 4568899999999999999999885 5789999999999999999765432 4799999999877 6778999999
Q ss_pred EEcc---ccccceeeec-ceEEecCCeEEE--------------------------eeCHHHHHHHHHhCCCcEEEEEeE
Q 009871 151 TMER---LTGKDQKISE-NFYVRGDGTRAF--------------------------YFSNDFLTSLFKENGFDVEELGLC 200 (523)
Q Consensus 151 ~~~~---~~~~~~~~~~-~~~~~~~g~~~~--------------------------~~~~~~l~~ll~~~Gf~~~~~~~~ 200 (523)
++.. .......+.. ...++++|.+++ +++.+++.++++++||+++.+...
T Consensus 190 ~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 190 WNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp EEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred EECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEeC
Confidence 9910 0000000000 012334443321 247899999999999998877644
No 94
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.40 E-value=4.1e-12 Score=118.66 Aligned_cols=125 Identities=13% Similarity=0.108 Sum_probs=97.0
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++++. .++.+...|..+. +.. ++|
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~~~-------~~~-~~f 107 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAG-RTVYGIEPSREMRMIAKEKLP--------KEFSITEGDFLSF-------EVP-TSI 107 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTT-CEEEEECSCHHHHHHHHHHSC--------TTCCEESCCSSSC-------CCC-SCC
T ss_pred CCCeEEEeCCCCCHHHHHHHhCC-CeEEEEeCCHHHHHHHHHhCC--------CceEEEeCChhhc-------CCC-CCe
Confidence 67899999999998888888874 589999999999999988754 2344554444432 122 689
Q ss_pred cEEEEccccCCCCChHH--HHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-----------------------------
Q 009871 415 EVILGTDVSYIPEAILP--LFATAKELTASSNKSLREDQQPAFILCHIFRQ----------------------------- 463 (523)
Q Consensus 415 D~Ii~~d~~y~~~~~~~--l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~----------------------------- 463 (523)
|+|+++.++++...... +++.+.++| +|||.+++......
T Consensus 108 D~v~~~~~l~~~~~~~~~~~l~~~~~~L---------kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (220)
T 3hnr_A 108 DTIVSTYAFHHLTDDEKNVAIAKYSQLL---------NKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYY 178 (220)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHS---------CTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCC
T ss_pred EEEEECcchhcCChHHHHHHHHHHHHhc---------CCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhc
Confidence 99999999998877766 999999999 77999999864321
Q ss_pred CChhHHHHHHHHcCCEEEEEcC
Q 009871 464 VDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 464 ~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
.+.+.+.+.++++||++..+..
T Consensus 179 ~~~~~~~~~l~~aGf~v~~~~~ 200 (220)
T 3hnr_A 179 TRIPVMQTIFENNGFHVTFTRL 200 (220)
T ss_dssp CBHHHHHHHHHHTTEEEEEEEC
T ss_pred CCHHHHHHHHHHCCCEEEEeec
Confidence 1335677888999999887754
No 95
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.40 E-value=3.4e-13 Score=129.80 Aligned_cols=79 Identities=19% Similarity=0.194 Sum_probs=66.6
Q ss_pred hHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCC
Q 009871 63 LDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQI 142 (523)
Q Consensus 63 l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~ 142 (523)
+...+.+.++..++.+|||||||+|..+..+++ ++.+|+|+|+|+.|++.|+++. +++++++|+.++ ++
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~d~~~~----~~ 90 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP-----QVEWFTGYAENL----AL 90 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT-----TEEEECCCTTSC----CS
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc-----CCEEEECchhhC----CC
Confidence 334444555556789999999999999999997 4788999999999999887764 799999999877 67
Q ss_pred CCCceeEEEE
Q 009871 143 SPSSIDIVTM 152 (523)
Q Consensus 143 ~~~~fD~V~~ 152 (523)
++++||+|++
T Consensus 91 ~~~~fD~v~~ 100 (261)
T 3ege_A 91 PDKSVDGVIS 100 (261)
T ss_dssp CTTCBSEEEE
T ss_pred CCCCEeEEEE
Confidence 7899999999
No 96
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.40 E-value=2e-12 Score=115.63 Aligned_cols=122 Identities=16% Similarity=0.216 Sum_probs=97.2
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++.+|||+|||+|.++..++..+. +|+++|+++.+++.++++ . .++.+...| .++..++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~--~-------~~v~~~~~d----------~~~~~~~ 75 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK--F-------DSVITLSDP----------KEIPDNS 75 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH--C-------TTSEEESSG----------GGSCTTC
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh--C-------CCcEEEeCC----------CCCCCCc
Confidence 4677999999999988888888875 999999999999999887 1 345555444 1334678
Q ss_pred ccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-----------CChhHHHHHHHHcCCEEEE
Q 009871 414 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-----------VDEPSMLSAATQCGFRLVD 482 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-----------~~~~~~~~~~~~~gf~~~~ 482 (523)
||+|+++.++++......+++.+.++| +|+|.+++....+. .+..++.+.++ ||++.+
T Consensus 76 ~D~v~~~~~l~~~~~~~~~l~~~~~~L---------~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~ 144 (170)
T 3i9f_A 76 VDFILFANSFHDMDDKQHVISEVKRIL---------KDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEK 144 (170)
T ss_dssp EEEEEEESCSTTCSCHHHHHHHHHHHE---------EEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEE
T ss_pred eEEEEEccchhcccCHHHHHHHHHHhc---------CCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEE
Confidence 999999999999999999999999999 67999998865432 23445666666 999988
Q ss_pred EcCC
Q 009871 483 KWPS 486 (523)
Q Consensus 483 ~~~~ 486 (523)
....
T Consensus 145 ~~~~ 148 (170)
T 3i9f_A 145 RFNP 148 (170)
T ss_dssp EECS
T ss_pred ccCC
Confidence 8763
No 97
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.40 E-value=3.9e-12 Score=123.16 Aligned_cols=138 Identities=14% Similarity=0.132 Sum_probs=105.9
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhc-CC-CEEEEEcCChH------HHHHHHHHHHhcCCCCCCCceEEEeee-cCCCCc
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAG-SA-DLVVATDGDSI------ALDLLAQNVTANLKPPFLAKLITKRLE-WGNRDH 402 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~-~~-~~V~~~D~~~~------~l~~~~~n~~~n~~~~~~~~v~~~~ld-w~~~~~ 402 (523)
...++.+|||||||+|.++..++.. ++ .+|+++|+|+. +++.+++++..++.. .++.+...| +... .
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~~-~ 115 (275)
T 3bkx_A 40 QVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG---DRLTVHFNTNLSDD-L 115 (275)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG---GGEEEECSCCTTTC-C
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC---CceEEEECChhhhc-c
Confidence 4457889999999999988888887 44 69999999997 999999999887653 467776665 3221 1
Q ss_pred chhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec--------------------
Q 009871 403 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-------------------- 462 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r-------------------- 462 (523)
.+++.++||+|++..++++......+++.+..++ +|||.+++.....
T Consensus 116 ----~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~---------~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (275)
T 3bkx_A 116 ----GPIADQHFDRVVLAHSLWYFASANALALLFKNMA---------AVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLL 182 (275)
T ss_dssp ----GGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHT---------TTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHH
T ss_pred ----CCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHh---------CCCCEEEEEEecCCCCchhhhhHHHHHHHHHHH
Confidence 1344679999999999999888888888888888 5699998865321
Q ss_pred -------------CCChhHHHHHHHHcCCEEEEEcCC
Q 009871 463 -------------QVDEPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 463 -------------~~~~~~~~~~~~~~gf~~~~~~~~ 486 (523)
..+...+.+.++++||++.++...
T Consensus 183 ~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 183 YAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred hhccccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 123346777888999999887654
No 98
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.40 E-value=2.6e-12 Score=123.35 Aligned_cols=120 Identities=15% Similarity=0.158 Sum_probs=87.9
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
..++.+|||||||+|..+..+++. +.+|+|+|+|+.|++.|+++......++++.++|+.++ ++++++||+|++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~~~~~fD~v~~ 110 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAI----PLPDESVHGVIV 110 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSC----CSCTTCEEEEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccC----CCCCCCeeEEEE
Confidence 356789999999999999999987 57899999999999999998633457899999999876 677889999999
Q ss_pred -----------------ccccccceeeecceEEecC-Ce---------------------EEEeeCHHHHHHHHHhCCCc
Q 009871 153 -----------------ERLTGKDQKISENFYVRGD-GT---------------------RAFYFSNDFLTSLFKENGFD 193 (523)
Q Consensus 153 -----------------~~~~~~~~~~~~~~~~~~~-g~---------------------~~~~~~~~~l~~ll~~~Gf~ 193 (523)
.+.+++++.+.-. +..++ .. ...+++.+++.++|+++||.
T Consensus 111 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 189 (263)
T 2yqz_A 111 VHLWHLVPDWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLK 189 (263)
T ss_dssp ESCGGGCTTHHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCchhhcCCHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCC
Confidence 2333444443211 11110 00 01234677889999999999
Q ss_pred EEEEEe
Q 009871 194 VEELGL 199 (523)
Q Consensus 194 ~~~~~~ 199 (523)
++.+..
T Consensus 190 ~~~~~~ 195 (263)
T 2yqz_A 190 PRTREV 195 (263)
T ss_dssp CEEEEE
T ss_pred cceEEE
Confidence 766543
No 99
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.39 E-value=3e-13 Score=128.12 Aligned_cols=118 Identities=12% Similarity=0.080 Sum_probs=89.1
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE-
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM- 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~- 152 (523)
.++.+|||||||+|..+..+++..+ .+|+|||+|+.|++.|+++......++.++.+|+... ..++++++||.|+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~--~~~~~~~~FD~i~~D 135 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV--APTLPDGHFDGILYD 135 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH--GGGSCTTCEEEEEEC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhh--cccccccCCceEEEe
Confidence 5788999999999999999988764 5799999999999999998877777899999988643 22467889999986
Q ss_pred --------------ccccccceeeecceEEecCCeEEEee------------------CHHHHHHHHHhCCCcEEEEEe
Q 009871 153 --------------ERLTGKDQKISENFYVRGDGTRAFYF------------------SNDFLTSLFKENGFDVEELGL 199 (523)
Q Consensus 153 --------------~~~~~~~~~~~~~~~~~~~g~~~~~~------------------~~~~l~~ll~~~Gf~~~~~~~ 199 (523)
..++....+ +++|+|.+.|+. ..+.+...|.++||+...+..
T Consensus 136 ~~~~~~~~~~~~~~~~~~~e~~r-----vLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~~i~~ 209 (236)
T 3orh_A 136 TYPLSEETWHTHQFNFIKNHAFR-----LLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRENIRT 209 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHH-----HEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGGGEEE
T ss_pred eeecccchhhhcchhhhhhhhhh-----eeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEEEEEE
Confidence 111222333 688999887742 133455667789998655543
No 100
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.39 E-value=5e-13 Score=124.46 Aligned_cols=128 Identities=16% Similarity=0.241 Sum_probs=90.6
Q ss_pred HhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCCC
Q 009871 67 WGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPS 145 (523)
Q Consensus 67 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~ 145 (523)
|.+.++ .++.+|||||||+|.++..+++.+|+.+|+|||+|+.|++.|+++.... ..++.++++|+.++ +..++++
T Consensus 31 ~~~~f~-~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l--~~~~~~~ 107 (213)
T 2fca_A 31 WNTVFG-NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTL--TDVFEPG 107 (213)
T ss_dssp HHHHHT-SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGH--HHHCCTT
T ss_pred HHHHcC-CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHH--HhhcCcC
Confidence 333444 4678999999999999999999999999999999999999999876433 35799999999864 2125678
Q ss_pred ceeEEEE---ccccccc---ee------eec-ceEEecCCeEEEeeC----HHHHHHHHHhCCCcEEEE
Q 009871 146 SIDIVTM---ERLTGKD---QK------ISE-NFYVRGDGTRAFYFS----NDFLTSLFKENGFDVEEL 197 (523)
Q Consensus 146 ~fD~V~~---~~~~~~~---~~------~~~-~~~~~~~g~~~~~~~----~~~l~~ll~~~Gf~~~~~ 197 (523)
+||.|++ ..+.... .+ +.. ...++++|.+.+... .+++.+.+.+.||.....
T Consensus 108 ~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 108 EVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp SCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccccc
Confidence 9999987 1110100 00 000 125788888876441 345677788889876543
No 101
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.39 E-value=1.6e-12 Score=124.88 Aligned_cols=148 Identities=14% Similarity=0.081 Sum_probs=106.9
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHh---cCCCCCCCceEEE
Q 009871 318 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTA---NLKPPFLAKLITK 393 (523)
Q Consensus 318 ~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~---n~~~~~~~~v~~~ 393 (523)
..+.+|+.|+. ..++.+|||||||+|.++..++.+. ..+|+++|+++.+++.+++|+.. |+.. .++.+.
T Consensus 23 ~D~~lL~~~~~----~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~---~~v~~~ 95 (260)
T 2ozv_A 23 MDAMLLASLVA----DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFS---ARIEVL 95 (260)
T ss_dssp CHHHHHHHTCC----CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTG---GGEEEE
T ss_pred cHHHHHHHHhc----ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCc---ceEEEE
Confidence 45677777653 3367799999999999998888886 45899999999999999999988 7664 467887
Q ss_pred eeecCCCCcchhhhhhcCCCccEEEEccccCCC------------------CChHHHHHHHHHHhhccCCCCCCCCCcEE
Q 009871 394 RLEWGNRDHIEAIKEENNEGFEVILGTDVSYIP------------------EAILPLFATAKELTASSNKSLREDQQPAF 455 (523)
Q Consensus 394 ~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~------------------~~~~~l~~~l~~ll~~~~~~~~~~~~g~~ 455 (523)
..|+.+.........+...+||+|+++...+.. ..+..+++.+.++| +|+|.+
T Consensus 96 ~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~L---------kpgG~l 166 (260)
T 2ozv_A 96 EADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIM---------VSGGQL 166 (260)
T ss_dssp ECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHE---------EEEEEE
T ss_pred eCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHc---------CCCCEE
Confidence 777765410000001345689999998555433 24788999999999 679999
Q ss_pred EEEEeecCCChhHHHHHHHHcCCEEEEEc
Q 009871 456 ILCHIFRQVDEPSMLSAATQCGFRLVDKW 484 (523)
Q Consensus 456 ~l~~~~r~~~~~~~~~~~~~~gf~~~~~~ 484 (523)
++..... ...++++.+++. |...++.
T Consensus 167 ~~~~~~~--~~~~~~~~l~~~-~~~~~i~ 192 (260)
T 2ozv_A 167 SLISRPQ--SVAEIIAACGSR-FGGLEIT 192 (260)
T ss_dssp EEEECGG--GHHHHHHHHTTT-EEEEEEE
T ss_pred EEEEcHH--HHHHHHHHHHhc-CCceEEE
Confidence 9876543 345677877765 7766553
No 102
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.39 E-value=1.3e-12 Score=127.35 Aligned_cols=76 Identities=13% Similarity=0.099 Sum_probs=66.3
Q ss_pred cCCCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEE
Q 009871 72 SGAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 72 ~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
...++.+|||||||+|..+..+++.+| +.+|+|+|+|+.|++.|+++....+.++++.++|+.+. ++ +++||+|
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~----~~-~~~fD~v 93 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI----EL-NDKYDIA 93 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTC----CC-SSCEEEE
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhc----Cc-CCCeeEE
Confidence 445788999999999999999999987 48999999999999999998765556899999999976 44 4689999
Q ss_pred EE
Q 009871 151 TM 152 (523)
Q Consensus 151 ~~ 152 (523)
++
T Consensus 94 ~~ 95 (284)
T 3gu3_A 94 IC 95 (284)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 103
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.39 E-value=3.5e-13 Score=132.83 Aligned_cols=74 Identities=19% Similarity=0.195 Sum_probs=63.9
Q ss_pred CCCCeEEEECCCccccHHHHH-hhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLI-AAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~-~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
.++.+|||||||+|..+..++ ...++.+|+|+|+|+.|++.|+++....+ .+++++++|+.++ +++ ++||+|
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~-~~fD~v 191 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKL----DTR-EGYDLL 191 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGC----CCC-SCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcC----Ccc-CCeEEE
Confidence 578899999999999999986 45778899999999999999999875432 4599999999977 555 899999
Q ss_pred EE
Q 009871 151 TM 152 (523)
Q Consensus 151 ~~ 152 (523)
++
T Consensus 192 ~~ 193 (305)
T 3ocj_A 192 TS 193 (305)
T ss_dssp EC
T ss_pred EE
Confidence 99
No 104
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.39 E-value=1.7e-12 Score=127.16 Aligned_cols=108 Identities=17% Similarity=0.121 Sum_probs=86.4
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhh-cCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE-NNE 412 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~-~~~ 412 (523)
.++.+|||||||+|.++..++..+..+|+++|+++.+++.+++++..++.. .++.+...|..+. ++ .++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-------~~~~~~ 132 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRR---FKVFFRAQDSYGR-------HMDLGK 132 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCS---SEEEEEESCTTTS-------CCCCSS
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCC---ccEEEEECCcccc-------ccCCCC
Confidence 367899999999998888887777669999999999999999998876553 4567776666543 12 356
Q ss_pred CccEEEEccccCC----CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 009871 413 GFEVILGTDVSYI----PEAILPLFATAKELTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 413 ~fD~Ii~~d~~y~----~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
+||+|++..++++ ......+++.+.++| +|||.+++...
T Consensus 133 ~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~ 175 (298)
T 1ri5_A 133 EFDVISSQFSFHYAFSTSESLDIAQRNIARHL---------RPGGYFIMTVP 175 (298)
T ss_dssp CEEEEEEESCGGGGGSSHHHHHHHHHHHHHTE---------EEEEEEEEEEE
T ss_pred CcCEEEECchhhhhcCCHHHHHHHHHHHHHhc---------CCCCEEEEEEC
Confidence 8999999998865 456788999999999 67999987754
No 105
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.39 E-value=3.3e-12 Score=123.92 Aligned_cols=125 Identities=12% Similarity=0.137 Sum_probs=98.6
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||+|||+|.++..++..++.+|+++|+|+.+++.+++|+..|++. .++.+...|..+.. ...+|
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~---~~v~~~~~D~~~~~--------~~~~f 193 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVE---DRMSAYNMDNRDFP--------GENIA 193 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCT---TTEEEECSCTTTCC--------CCSCE
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCC---ceEEEEECCHHHhc--------ccCCc
Confidence 58899999999999999999888778999999999999999999999885 45677666554431 14689
Q ss_pred cEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-----CChhHHHHHHHHcCCEEEEE
Q 009871 415 EVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-----VDEPSMLSAATQCGFRLVDK 483 (523)
Q Consensus 415 D~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-----~~~~~~~~~~~~~gf~~~~~ 483 (523)
|+|++... .....++..+.++| +|||.++++..... .....+.+.+++.||++..+
T Consensus 194 D~Vi~~~p----~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 194 DRILMGYV----VRTHEFIPKALSIA---------KDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp EEEEECCC----SSGGGGHHHHHHHE---------EEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred cEEEECCc----hhHHHHHHHHHHHC---------CCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEEe
Confidence 99998532 34467889999999 67999988766531 22356778888999998773
No 106
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.39 E-value=1.7e-12 Score=123.27 Aligned_cols=71 Identities=20% Similarity=0.208 Sum_probs=61.5
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++......++++.++|+.++ +++ ++||+|++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~~-~~fD~v~~ 107 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL----NIN-RKFDLITC 107 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC----CCS-CCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccC----Ccc-CCceEEEE
Confidence 6789999999999999999988 56799999999999999987654444789999999876 444 78999998
No 107
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.38 E-value=1.5e-12 Score=118.51 Aligned_cols=134 Identities=12% Similarity=0.132 Sum_probs=100.1
Q ss_pred HHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcch
Q 009871 325 AVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIE 404 (523)
Q Consensus 325 ~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~ 404 (523)
.++.......++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++|+..++.. .++.+...|+.+
T Consensus 23 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~----- 93 (192)
T 1l3i_A 23 CLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLG---DNVTLMEGDAPE----- 93 (192)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCC---TTEEEEESCHHH-----
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCC---cceEEEecCHHH-----
Confidence 333333344578899999999998888888877 79999999999999999999988763 356665554432
Q ss_pred hhhhhcC-CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEE
Q 009871 405 AIKEENN-EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDK 483 (523)
Q Consensus 405 ~~~~~~~-~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~ 483 (523)
.++. .+||+|++..++ ..+..+++.+.++| +|+|.+++..... .....+.+.+++.||.+..+
T Consensus 94 ---~~~~~~~~D~v~~~~~~---~~~~~~l~~~~~~l---------~~gG~l~~~~~~~-~~~~~~~~~l~~~g~~~~~~ 157 (192)
T 1l3i_A 94 ---ALCKIPDIDIAVVGGSG---GELQEILRIIKDKL---------KPGGRIIVTAILL-ETKFEAMECLRDLGFDVNIT 157 (192)
T ss_dssp ---HHTTSCCEEEEEESCCT---TCHHHHHHHHHHTE---------EEEEEEEEEECBH-HHHHHHHHHHHHTTCCCEEE
T ss_pred ---hcccCCCCCEEEECCch---HHHHHHHHHHHHhc---------CCCcEEEEEecCc-chHHHHHHHHHHCCCceEEE
Confidence 1122 489999998654 35789999999999 6799998876542 23456788889999966543
No 108
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.38 E-value=1.1e-12 Score=133.48 Aligned_cols=124 Identities=19% Similarity=0.228 Sum_probs=92.1
Q ss_pred CCCCeEEEECCCccccHHHHHhhC-CCCEEEEEeCCHHHHHHHHhcccc---------CCCcEEEEEeeccCCcc--CCC
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDF---------TETRVSTFVCDLISDDL--SRQ 141 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~gvD~S~~~l~~a~~~~~~---------~~~~v~~~~~d~~~~~~--~~~ 141 (523)
.++.+|||||||+|..+..+++.. ++.+|+|+|+|+.|++.|+++... ...+++++++|+.++.. +.+
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 467899999999999999999884 778999999999999999997532 22689999999986421 114
Q ss_pred CCCCceeEEEEcc----------ccccceeeecceEEecCCeEEEe--------------------------eCHHHHHH
Q 009871 142 ISPSSIDIVTMER----------LTGKDQKISENFYVRGDGTRAFY--------------------------FSNDFLTS 185 (523)
Q Consensus 142 ~~~~~fD~V~~~~----------~~~~~~~~~~~~~~~~~g~~~~~--------------------------~~~~~l~~ 185 (523)
+++++||+|++.. ++....+ .++++|.+++. ++.+++.+
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r-----~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKLALFKEIHR-----VLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRR 236 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHH-----HEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHH
T ss_pred CCCCCEEEEEEccchhcCCCHHHHHHHHHH-----HcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHH
Confidence 6788999999911 1111111 45566655431 46699999
Q ss_pred HHHhCCCcEEEEEeEee
Q 009871 186 LFKENGFDVEELGLCCK 202 (523)
Q Consensus 186 ll~~~Gf~~~~~~~~~~ 202 (523)
+|+++||..+++.....
T Consensus 237 ll~~aGF~~v~~~~~~~ 253 (383)
T 4fsd_A 237 LVAEAGFRDVRLVSVGP 253 (383)
T ss_dssp HHHHTTCCCEEEEEEEE
T ss_pred HHHHCCCceEEEEeccc
Confidence 99999999877655443
No 109
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.38 E-value=3.6e-12 Score=120.83 Aligned_cols=127 Identities=13% Similarity=0.139 Sum_probs=96.7
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
..++.+|||||||+|.++..++..+. +|+++|+|+.+++.++++ +.+...|. ...+.+++++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~------------~~~~~~d~-----~~~~~~~~~~ 100 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK------------FNVVKSDA-----IEYLKSLPDK 100 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT------------SEEECSCH-----HHHHHTSCTT
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh------------cceeeccH-----HHHhhhcCCC
Confidence 34678999999999998888888755 699999999999998865 23322221 1111244567
Q ss_pred CccEEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-----------------CCChhHHHHHH
Q 009871 413 GFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFR-----------------QVDEPSMLSAA 473 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r-----------------~~~~~~~~~~~ 473 (523)
+||+|++..++++.. .+..+++.+.++| +|||.+++..... ..+...+.+.+
T Consensus 101 ~fD~i~~~~~l~~~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 171 (240)
T 3dli_A 101 YLDGVMISHFVEHLDPERLFELLSLCYSKM---------KYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFIL 171 (240)
T ss_dssp CBSEEEEESCGGGSCGGGHHHHHHHHHHHB---------CTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHH
T ss_pred CeeEEEECCchhhCCcHHHHHHHHHHHHHc---------CCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHH
Confidence 999999999998877 6699999999999 7799998876542 12345678889
Q ss_pred HHcCCEEEEEcCC
Q 009871 474 TQCGFRLVDKWPS 486 (523)
Q Consensus 474 ~~~gf~~~~~~~~ 486 (523)
+++||++.++...
T Consensus 172 ~~aGf~~~~~~~~ 184 (240)
T 3dli_A 172 EYLGFRDVKIEFF 184 (240)
T ss_dssp HHHTCEEEEEEEE
T ss_pred HHCCCeEEEEEEe
Confidence 9999999887543
No 110
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.38 E-value=1.7e-12 Score=121.81 Aligned_cols=123 Identities=7% Similarity=0.048 Sum_probs=95.4
Q ss_pred CCCeEEEECCCccHHHHHHHhcCC-CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC-
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE- 412 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~- 412 (523)
++.+|||+|||+|.++..++..+. .+|+++|+++.+++.|++|++.|++. .++.+...|+.+. +.+.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~---~~I~v~~gD~l~~--------~~~~~ 89 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLT---EQIDVRKGNGLAV--------IEKKD 89 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT---TTEEEEECSGGGG--------CCGGG
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC---ceEEEEecchhhc--------cCccc
Confidence 678999999999999999998874 48999999999999999999999985 5677776655432 1222
Q ss_pred CccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEE
Q 009871 413 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVD 482 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~ 482 (523)
+||+|+.+-+.- +.+..++......| ++++.++++.. ...+.+.+.+.+.||.+.+
T Consensus 90 ~~D~IviagmGg--~lI~~IL~~~~~~L---------~~~~~lIlq~~---~~~~~lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 90 AIDTIVIAGMGG--TLIRTILEEGAAKL---------AGVTKLILQPN---IAAWQLREWSEQNNWLITS 145 (244)
T ss_dssp CCCEEEEEEECH--HHHHHHHHHTGGGG---------TTCCEEEEEES---SCHHHHHHHHHHHTEEEEE
T ss_pred cccEEEEeCCch--HHHHHHHHHHHHHh---------CCCCEEEEEcC---CChHHHHHHHHHCCCEEEE
Confidence 599988653222 44666777777777 56889888864 3677889999999999854
No 111
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.37 E-value=4.7e-13 Score=128.06 Aligned_cols=68 Identities=26% Similarity=0.449 Sum_probs=60.6
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
+.+.+|||||||+|..+..|++.+ .+|+|+|+|+.|++.|+++ .++++.++|++++ ++++++||+|++
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~-----~~v~~~~~~~e~~----~~~~~sfD~v~~ 105 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRH-----PRVTYAVAPAEDT----GLPPASVDVAIA 105 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCC-----TTEEEEECCTTCC----CCCSSCEEEEEE
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhc-----CCceeehhhhhhh----cccCCcccEEEE
Confidence 356789999999999999999885 5699999999999988764 5799999999988 788999999999
No 112
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.37 E-value=1.4e-12 Score=127.61 Aligned_cols=112 Identities=15% Similarity=0.243 Sum_probs=84.6
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++.+|||||||+|.++..++..+. +|+++|+|+.|++.+++|+..........++.+...++.+.. ..+ +..++
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~--~~~~~ 130 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD--KDV--PAGDG 130 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH--HHS--CCTTC
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCc--ccc--ccCCC
Confidence 3678999999999988888888865 899999999999999998865443322234455554443210 000 34579
Q ss_pred ccEEEEc-cccCCCCC-------hHHHHHHHHHHhhccCCCCCCCCCcEEEEEE
Q 009871 414 FEVILGT-DVSYIPEA-------ILPLFATAKELTASSNKSLREDQQPAFILCH 459 (523)
Q Consensus 414 fD~Ii~~-d~~y~~~~-------~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~ 459 (523)
||+|++. .++.+... ...+++.+.++| +|||.+++..
T Consensus 131 fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~l~~~~ 175 (293)
T 3thr_A 131 FDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMV---------RPGGLLVIDH 175 (293)
T ss_dssp EEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTE---------EEEEEEEEEE
T ss_pred eEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHc---------CCCeEEEEEe
Confidence 9999998 89888777 999999999999 6788888754
No 113
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.37 E-value=6.1e-12 Score=114.17 Aligned_cols=131 Identities=15% Similarity=0.065 Sum_probs=88.0
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++.+|||+|||+|.++..++.. +.+|+++|+|+.|++.|++|+..++. .++.+...+. ..+..+.+++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~----~~v~~~~~~~------~~l~~~~~~~ 89 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI----ENTELILDGH------ENLDHYVREP 89 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC----CCEEEEESCG------GGGGGTCCSC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC----CcEEEEeCcH------HHHHhhccCC
Confidence 47889999999999988888888 67899999999999999999998876 3455544222 1222234678
Q ss_pred ccEEEEccccCCC----------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCC---h-hHH---HHHHHHc
Q 009871 414 FEVILGTDVSYIP----------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD---E-PSM---LSAATQC 476 (523)
Q Consensus 414 fD~Ii~~d~~y~~----------~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~---~-~~~---~~~~~~~ 476 (523)
||+|+++- .|.+ .....+++.+.++| +|||.++++....... + ..+ +..+...
T Consensus 90 fD~v~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (185)
T 3mti_A 90 IRAAIFNL-GYLPSADKSVITKPHTTLEAIEKILDRL---------EVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQR 159 (185)
T ss_dssp EEEEEEEE-C-----------CHHHHHHHHHHHHHHE---------EEEEEEEEEEC------CHHHHHHHHHHHHSCTT
T ss_pred cCEEEEeC-CCCCCcchhcccChhhHHHHHHHHHHhc---------CCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCc
Confidence 99998762 2221 33456778888999 6799998765542221 1 222 3333346
Q ss_pred CCEEEEEcC
Q 009871 477 GFRLVDKWP 485 (523)
Q Consensus 477 gf~~~~~~~ 485 (523)
+|.+.....
T Consensus 160 ~~~~~~~~~ 168 (185)
T 3mti_A 160 VFTAMLYQP 168 (185)
T ss_dssp TEEEEEEEE
T ss_pred eEEEEEehh
Confidence 688776644
No 114
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.37 E-value=1e-12 Score=122.76 Aligned_cols=75 Identities=23% Similarity=0.317 Sum_probs=64.4
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC------CcEEEEEeeccCCccCCCCCCCce
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE------TRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
.++.+|||||||+|.++..+++.++..+|+|+|+|+.|++.|+++..... .+++++++|+... ++++++|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~f 103 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR----DKRFSGY 103 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC----CGGGTTC
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc----ccccCCC
Confidence 56789999999999999999998877899999999999999998764321 2799999999766 5567899
Q ss_pred eEEEE
Q 009871 148 DIVTM 152 (523)
Q Consensus 148 D~V~~ 152 (523)
|+|++
T Consensus 104 D~V~~ 108 (219)
T 3jwg_A 104 DAATV 108 (219)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99999
No 115
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=4.4e-12 Score=114.49 Aligned_cols=133 Identities=14% Similarity=0.155 Sum_probs=98.5
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCc
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 402 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~ 402 (523)
+..++.......++.+|||+|||+|.++..++. ...+|+++|+++.+++.+++|+..++. .++.+...|+.+
T Consensus 23 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~~d~~~--- 94 (183)
T 2yxd_A 23 IRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI----KNCQIIKGRAED--- 94 (183)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC----CSEEEEESCHHH---
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC----CcEEEEECCccc---
Confidence 333443333445788999999999988888877 667999999999999999999998876 346666655532
Q ss_pred chhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEE
Q 009871 403 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVD 482 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~ 482 (523)
.++.++||+|+++.+ .....+++.+.++ |+|.+++.... ......+.+.++++||.++.
T Consensus 95 -----~~~~~~~D~i~~~~~----~~~~~~l~~~~~~-----------~gG~l~~~~~~-~~~~~~~~~~l~~~g~~~~~ 153 (183)
T 2yxd_A 95 -----VLDKLEFNKAFIGGT----KNIEKIIEILDKK-----------KINHIVANTIV-LENAAKIINEFESRGYNVDA 153 (183)
T ss_dssp -----HGGGCCCSEEEECSC----SCHHHHHHHHHHT-----------TCCEEEEEESC-HHHHHHHHHHHHHTTCEEEE
T ss_pred -----cccCCCCcEEEECCc----ccHHHHHHHHhhC-----------CCCEEEEEecc-cccHHHHHHHHHHcCCeEEE
Confidence 123368999999977 6677777776655 28888887644 22345688899999998877
Q ss_pred Ec
Q 009871 483 KW 484 (523)
Q Consensus 483 ~~ 484 (523)
+.
T Consensus 154 ~~ 155 (183)
T 2yxd_A 154 VN 155 (183)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 116
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.37 E-value=4.8e-13 Score=126.97 Aligned_cols=116 Identities=16% Similarity=0.192 Sum_probs=82.6
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE-
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM- 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~- 152 (523)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++ ++++++|+.+. ..++++++||+|++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~--~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK-------FNVVKSDAIEY--LKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT-------SEEECSCHHHH--HHTSCTTCBSEEEEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh-------cceeeccHHHH--hhhcCCCCeeEEEEC
Confidence 46789999999999999999988 55699999999999999986 67888888652 11467899999999
Q ss_pred ---cccccc--ceeeec-ceEEecCCeEE----------------------EeeCHHHHHHHHHhCCCcEEEEEeE
Q 009871 153 ---ERLTGK--DQKISE-NFYVRGDGTRA----------------------FYFSNDFLTSLFKENGFDVEELGLC 200 (523)
Q Consensus 153 ---~~~~~~--~~~~~~-~~~~~~~g~~~----------------------~~~~~~~l~~ll~~~Gf~~~~~~~~ 200 (523)
..+..+ ...+.. ...++++|.++ .+++.+++.++++++||+++.+...
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 184 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEFF 184 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEEE
T ss_pred CchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEEe
Confidence 111000 000000 11344554443 2458899999999999998766543
No 117
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.37 E-value=2.6e-12 Score=119.32 Aligned_cols=104 Identities=19% Similarity=0.264 Sum_probs=80.9
Q ss_pred hhHHHHHHHHhccc----ccccchhhhHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHH
Q 009871 41 AKKYWDLFYKRHQD----RFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVM 116 (523)
Q Consensus 41 ~~~~Wd~~y~~~~~----~f~~~~~~l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~ 116 (523)
..+||+.+|..... .++.....+...+...+ .++.+|||+|||+|.++..+++.++. +|+|+|+|+.|++.|+
T Consensus 6 ~~~~W~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~ 82 (215)
T 2pxx_A 6 EVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQ 82 (215)
T ss_dssp CHHHHHHHTTTTTTSCCCCTTCCHHHHHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHH
T ss_pred chhHHHHHhccCCCCCCcccccCHHHHHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHH
Confidence 35799999987652 34444444444444443 46789999999999999999988543 6999999999999999
Q ss_pred hccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 117 THKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 117 ~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
++... ..++++.++|+.++ ++++++||+|++
T Consensus 83 ~~~~~-~~~i~~~~~d~~~~----~~~~~~fD~v~~ 113 (215)
T 2pxx_A 83 ACYAH-VPQLRWETMDVRKL----DFPSASFDVVLE 113 (215)
T ss_dssp HHTTT-CTTCEEEECCTTSC----CSCSSCEEEEEE
T ss_pred Hhccc-CCCcEEEEcchhcC----CCCCCcccEEEE
Confidence 97643 35789999999876 567789999998
No 118
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.37 E-value=2.5e-12 Score=119.92 Aligned_cols=75 Identities=20% Similarity=0.260 Sum_probs=64.3
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC------CcEEEEEeeccCCccCCCCCCCce
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE------TRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
.++.+|||||||+|.++..+++.++..+|+|+|+|+.|++.|+++..... .++++.++|+... +.++++|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~f 103 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ----DKRFHGY 103 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC----CGGGCSC
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc----cccCCCc
Confidence 56789999999999999999998877899999999999999999764322 2799999999765 4556899
Q ss_pred eEEEE
Q 009871 148 DIVTM 152 (523)
Q Consensus 148 D~V~~ 152 (523)
|+|++
T Consensus 104 D~v~~ 108 (217)
T 3jwh_A 104 DAATV 108 (217)
T ss_dssp SEEEE
T ss_pred CEEee
Confidence 99999
No 119
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.37 E-value=4.8e-12 Score=116.85 Aligned_cols=115 Identities=9% Similarity=0.115 Sum_probs=87.7
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCCCcee
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
.+...++.+|||+|||+|..+..+++.+|..+|+|+|+|+.|++.|+++.... ..+++++++|+.+. ....++||
T Consensus 35 ~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~~~~~~~D 110 (204)
T 3e05_A 35 KLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG----LDDLPDPD 110 (204)
T ss_dssp HTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT----CTTSCCCS
T ss_pred HcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh----hhcCCCCC
Confidence 34446788999999999999999999988899999999999999999976432 26799999999654 22236799
Q ss_pred EEEEcc-------ccccceeeecceEEecCCeEEEee----CHHHHHHHHHhCCCc
Q 009871 149 IVTMER-------LTGKDQKISENFYVRGDGTRAFYF----SNDFLTSLFKENGFD 193 (523)
Q Consensus 149 ~V~~~~-------~~~~~~~~~~~~~~~~~g~~~~~~----~~~~l~~ll~~~Gf~ 193 (523)
+|++.. ++....+ .++++|.+++.. +.+++.+.++++||.
T Consensus 111 ~i~~~~~~~~~~~~l~~~~~-----~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 111 RVFIGGSGGMLEEIIDAVDR-----RLKSEGVIVLNAVTLDTLTKAVEFLEDHGYM 161 (204)
T ss_dssp EEEESCCTTCHHHHHHHHHH-----HCCTTCEEEEEECBHHHHHHHHHHHHHTTCE
T ss_pred EEEECCCCcCHHHHHHHHHH-----hcCCCeEEEEEecccccHHHHHHHHHHCCCc
Confidence 999921 1112222 577888877642 456788999999993
No 120
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.37 E-value=1.1e-11 Score=120.72 Aligned_cols=116 Identities=9% Similarity=0.015 Sum_probs=91.8
Q ss_pred HHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCC
Q 009871 324 AAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 401 (523)
Q Consensus 324 a~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~ 401 (523)
...+.......++.+|||+|||+|.++..++... ..+|+++|+|+.+++.+++++..++. ++.+...|..+.
T Consensus 11 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~v~~~~~d~~~~- 84 (284)
T 3gu3_A 11 SFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-----DSEFLEGDATEI- 84 (284)
T ss_dssp HHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-----EEEEEESCTTTC-
T ss_pred HHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-----ceEEEEcchhhc-
Confidence 3333333455678899999999998888888773 36899999999999999999876432 566766665542
Q ss_pred cchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 402 HIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 402 ~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
++ +++||+|++..++++......+++.+.++| +|||.+++....
T Consensus 85 ------~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~ 128 (284)
T 3gu3_A 85 ------EL-NDKYDIAICHAFLLHMTTPETMLQKMIHSV---------KKGGKIICFEPH 128 (284)
T ss_dssp ------CC-SSCEEEEEEESCGGGCSSHHHHHHHHHHTE---------EEEEEEEEEECC
T ss_pred ------Cc-CCCeeEEEECChhhcCCCHHHHHHHHHHHc---------CCCCEEEEEecc
Confidence 12 358999999999999999999999999999 679999987654
No 121
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.37 E-value=4.5e-12 Score=128.86 Aligned_cols=139 Identities=16% Similarity=0.215 Sum_probs=106.2
Q ss_pred CCCCCeEEEECCCccHHHHHHHhc--CCCEEEEEcCChHHHHHHHHHHHhc-----C-CCCCCCceEEEeeecCCCCcch
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAG--SADLVVATDGDSIALDLLAQNVTAN-----L-KPPFLAKLITKRLEWGNRDHIE 404 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~--~~~~V~~~D~~~~~l~~~~~n~~~n-----~-~~~~~~~v~~~~ldw~~~~~~~ 404 (523)
..++.+|||||||+|.++..++.. ...+|+++|+++.+++.+++|+..+ + .. ..++.+...|+.+.....
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~--~~~v~~~~~d~~~l~~~~ 158 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPS--RSNVRFLKGFIENLATAE 158 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTT--CCCEEEEESCTTCGGGCB
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccC--CCceEEEEccHHHhhhcc
Confidence 457889999999999888888876 2459999999999999999998765 2 21 146777777665421110
Q ss_pred hhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC---------------------
Q 009871 405 AIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ--------------------- 463 (523)
Q Consensus 405 ~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~--------------------- 463 (523)
. .++++++||+|+++.++++......+++.+.++| +|||.+++......
T Consensus 159 ~-~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~L---------kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (383)
T 4fsd_A 159 P-EGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVL---------RDGGELYFSDVYADRRLSEAAQQDPILYGECLGGA 228 (383)
T ss_dssp S-CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHE---------EEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTC
T ss_pred c-CCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHc---------CCCCEEEEEEeccccccCHhHhhhHHHhhcccccC
Confidence 0 0234679999999999999889999999999999 67999998764432
Q ss_pred CChhHHHHHHHHcCCEEEEE
Q 009871 464 VDEPSMLSAATQCGFRLVDK 483 (523)
Q Consensus 464 ~~~~~~~~~~~~~gf~~~~~ 483 (523)
.....+.+.++++||+..++
T Consensus 229 ~~~~~~~~ll~~aGF~~v~~ 248 (383)
T 4fsd_A 229 LYLEDFRRLVAEAGFRDVRL 248 (383)
T ss_dssp CBHHHHHHHHHHTTCCCEEE
T ss_pred CCHHHHHHHHHHCCCceEEE
Confidence 23367888899999986654
No 122
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.37 E-value=4.9e-12 Score=115.96 Aligned_cols=128 Identities=21% Similarity=0.201 Sum_probs=97.2
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++++..++.. ++.+...|+.+. ++ +++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~----~~~~~~~d~~~~-------~~-~~~ 97 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANG-YDVDAWDKNAMSIANVERIKSIENLD----NLHTRVVDLNNL-------TF-DRQ 97 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCT----TEEEEECCGGGC-------CC-CCC
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHhCCCC----CcEEEEcchhhC-------CC-CCC
Confidence 467799999999998888888874 58999999999999999999887652 466666655432 12 468
Q ss_pred ccEEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec------------CCChhHHHHHHHHcCCE
Q 009871 414 FEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFR------------QVDEPSMLSAATQCGFR 479 (523)
Q Consensus 414 fD~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r------------~~~~~~~~~~~~~~gf~ 479 (523)
||+|+++.++++.. ....+++.+.++| +|||.+++..... ..+.+++.+.+.+ |+
T Consensus 98 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L---------~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~ 166 (199)
T 2xvm_A 98 YDFILSTVVLMFLEAKTIPGLIANMQRCT---------KPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WE 166 (199)
T ss_dssp EEEEEEESCGGGSCGGGHHHHHHHHHHTE---------EEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SE
T ss_pred ceEEEEcchhhhCCHHHHHHHHHHHHHhc---------CCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--Ce
Confidence 99999999988765 7899999999999 6799977654321 1234455555544 88
Q ss_pred EEEEcC
Q 009871 480 LVDKWP 485 (523)
Q Consensus 480 ~~~~~~ 485 (523)
+.+...
T Consensus 167 ~~~~~~ 172 (199)
T 2xvm_A 167 RVKYNE 172 (199)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 877654
No 123
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.37 E-value=5.4e-12 Score=121.16 Aligned_cols=116 Identities=18% Similarity=0.145 Sum_probs=90.2
Q ss_pred HHHHHhc-CCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCC
Q 009871 323 MAAVLAR-NPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 401 (523)
Q Consensus 323 la~~l~~-~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~ 401 (523)
+.+.+.. .....++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.+++++ .+. ..++.+...|+.+.
T Consensus 26 ~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~-~~~----~~~~~~~~~d~~~~- 98 (263)
T 2yqz_A 26 IATAMASAVHPKGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKI-AGV----DRKVQVVQADARAI- 98 (263)
T ss_dssp HHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHT-TTS----CTTEEEEESCTTSC-
T ss_pred HHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHh-hcc----CCceEEEEcccccC-
Confidence 4444432 2334578899999999998888888774 58999999999999999887 222 24577777666442
Q ss_pred cchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 009871 402 HIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 402 ~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
++++++||+|+++.++++..+...+++.+.++| +|||.+++...
T Consensus 99 ------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L---------~pgG~l~~~~~ 142 (263)
T 2yqz_A 99 ------PLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVL---------KPGGALLEGWD 142 (263)
T ss_dssp ------CSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHE---------EEEEEEEEEEE
T ss_pred ------CCCCCCeeEEEECCchhhcCCHHHHHHHHHHHC---------CCCcEEEEEec
Confidence 234568999999999999888999999999999 67999988743
No 124
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.37 E-value=3.9e-12 Score=121.94 Aligned_cols=75 Identities=15% Similarity=0.140 Sum_probs=64.8
Q ss_pred hhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 69 ~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
+.+...++.+|||||||+|..+..+++.+|+.+|+|+|+|+.|++.|+++. .++++.++|+.++ + ++++||
T Consensus 27 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~----~~~~~~~~d~~~~----~-~~~~fD 97 (259)
T 2p35_A 27 AQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL----PNTNFGKADLATW----K-PAQKAD 97 (259)
T ss_dssp TTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS----TTSEEEECCTTTC----C-CSSCEE
T ss_pred HhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC----CCcEEEECChhhc----C-ccCCcC
Confidence 334446778999999999999999999977788999999999999999873 5689999999876 4 578999
Q ss_pred EEEE
Q 009871 149 IVTM 152 (523)
Q Consensus 149 ~V~~ 152 (523)
+|++
T Consensus 98 ~v~~ 101 (259)
T 2p35_A 98 LLYA 101 (259)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9999
No 125
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.36 E-value=2.5e-12 Score=126.67 Aligned_cols=132 Identities=13% Similarity=0.114 Sum_probs=103.7
Q ss_pred CCCCeEEEECCCccHHHHHHH-h-cCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 334 VAGKKVLELGCGCGGICSMVA-A-GSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a-~-~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
.++.+|||||||+|..+..++ + ....+|+++|+++.+++.+++|+..++.. .++.+...|+.+. ++.
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-------~~~- 185 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALA---GQITLHRQDAWKL-------DTR- 185 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTG---GGEEEEECCGGGC-------CCC-
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCC---CceEEEECchhcC-------Ccc-
Confidence 477899999999997777774 2 34569999999999999999999887664 4677777666543 122
Q ss_pred CCccEEEEccccCCCCChHH---HHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-------------------------
Q 009871 412 EGFEVILGTDVSYIPEAILP---LFATAKELTASSNKSLREDQQPAFILCHIFRQ------------------------- 463 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~~---l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~------------------------- 463 (523)
++||+|+++.++++...... +++.+.++| +|||.++++...+.
T Consensus 186 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 256 (305)
T 3ocj_A 186 EGYDLLTSNGLNIYEPDDARVTELYRRFWQAL---------KPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLV 256 (305)
T ss_dssp SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHE---------EEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHH
T ss_pred CCeEEEEECChhhhcCCHHHHHHHHHHHHHhc---------CCCeEEEEEecCCCCcccccccceeeccccchhhhhhhH
Confidence 68999999998887665554 799999999 67999998773321
Q ss_pred ------------CChhHHHHHHHHcCCEEEEEcC
Q 009871 464 ------------VDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 464 ------------~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
.+..++.+.++++||++.++..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 257 FTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFED 290 (305)
T ss_dssp HHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEc
Confidence 2456778889999999988875
No 126
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.36 E-value=1.1e-11 Score=115.39 Aligned_cols=132 Identities=14% Similarity=0.066 Sum_probs=98.3
Q ss_pred CCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
++.+|||||||+|.++..++... ..+|+++|+++.+++.|++|+..+++ .++.+...|+.+. .. .+++++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~----~~v~~~~~d~~~~---~~--~~~~~~ 111 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV----PNIKLLWVDGSDL---TD--YFEDGE 111 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC----SSEEEEECCSSCG---GG--TSCTTC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC----CCEEEEeCCHHHH---Hh--hcCCCC
Confidence 56799999999999888888875 45899999999999999999998876 3577776666532 10 134568
Q ss_pred ccEEEEccccCCCC--------ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEcC
Q 009871 414 FEVILGTDVSYIPE--------AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 414 fD~Ii~~d~~y~~~--------~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
||+|+++...-+.. ....+++.+.++| +|||.+++...... ....+.+.+.+.||++..+..
T Consensus 112 ~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 112 IDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRIL---------PENGEIHFKTDNRG-LFEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp CSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHS---------CTTCEEEEEESCHH-HHHHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEECCCCccccchhhhccCCHHHHHHHHHHc---------CCCcEEEEEeCCHH-HHHHHHHHHHHCCCeeeeccc
Confidence 99999884332211 3467999999999 77999988764321 123566778889999988754
No 127
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.36 E-value=2.2e-12 Score=120.54 Aligned_cols=110 Identities=20% Similarity=0.245 Sum_probs=79.2
Q ss_pred CCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE---
Q 009871 76 RKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM--- 152 (523)
Q Consensus 76 ~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~--- 152 (523)
+.+|||||||+|..+..+++. +|+|+|+.|++.|+++ ++++.++|+..+ ++++++||+|++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~------~~~~~~~d~~~~----~~~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR------GVFVLKGTAENL----PLKDESFDFALMVTT 111 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT------TCEEEECBTTBC----CSCTTCEEEEEEESC
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc------CCEEEEcccccC----CCCCCCeeEEEEcch
Confidence 789999999999999888654 9999999999999986 478999999876 567789999999
Q ss_pred --------------ccccccceeeecceEEec-----------CC----eEEEeeCHHHHHHHHHhCCCcEEEEEeEe
Q 009871 153 --------------ERLTGKDQKISENFYVRG-----------DG----TRAFYFSNDFLTSLFKENGFDVEELGLCC 201 (523)
Q Consensus 153 --------------~~~~~~~~~~~~~~~~~~-----------~g----~~~~~~~~~~l~~ll~~~Gf~~~~~~~~~ 201 (523)
.+.+++++.+.-...... .+ ....+++.+++.++|+++||+++++....
T Consensus 112 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 189 (219)
T 1vlm_A 112 ICFVDDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQTL 189 (219)
T ss_dssp GGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred HhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEeccc
Confidence 122233332221000000 00 01123589999999999999988776543
No 128
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.36 E-value=2.4e-12 Score=120.69 Aligned_cols=72 Identities=24% Similarity=0.234 Sum_probs=63.3
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
++.+|||+|||+|..+..+++.++ +|+|+|+|+.|++.|+++......+++++++|+.++ ++++++||+|++
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~~~~~~D~v~~ 109 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKL----SFEDKTFDYVIF 109 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSC----CSCTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcC----CCCCCcEEEEEE
Confidence 478999999999999999998865 799999999999999998654457899999999876 566789999998
No 129
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.35 E-value=6.5e-12 Score=117.28 Aligned_cols=153 Identities=15% Similarity=0.170 Sum_probs=107.6
Q ss_pred cccccchhHH-HHHHHHhc---CCCCCCCCeEEEECCCccHHHHHHHhc-CC-CEEEEEcCChHHHHHHHHHHHhcCCCC
Q 009871 312 TGLMLWESAH-LMAAVLAR---NPTIVAGKKVLELGCGCGGICSMVAAG-SA-DLVVATDGDSIALDLLAQNVTANLKPP 385 (523)
Q Consensus 312 ~G~~~W~~a~-~la~~l~~---~~~~~~~~~VLElG~G~G~l~~~~a~~-~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~ 385 (523)
...+.|+--. .||..+.. +..+.+|.+|||||||+|..+..+|.. |+ .+|+++|+++.|++.+++++...
T Consensus 50 ~e~r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---- 125 (233)
T 4df3_A 50 EEYREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---- 125 (233)
T ss_dssp EEEEECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC----
T ss_pred ceeeeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh----
Confidence 3577886544 35555543 445679999999999999888888876 44 49999999999999998876542
Q ss_pred CCCceEEEeeecCCCCcchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCC
Q 009871 386 FLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD 465 (523)
Q Consensus 386 ~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~ 465 (523)
.++.....+-.+.+.. .....++|+|++ |+ .++.....++..+.++| +|||.++++...|..+
T Consensus 126 --~ni~~V~~d~~~p~~~----~~~~~~vDvVf~-d~-~~~~~~~~~l~~~~r~L---------KpGG~lvI~ik~r~~d 188 (233)
T 4df3_A 126 --RNIFPILGDARFPEKY----RHLVEGVDGLYA-DV-AQPEQAAIVVRNARFFL---------RDGGYMLMAIKARSID 188 (233)
T ss_dssp --TTEEEEESCTTCGGGG----TTTCCCEEEEEE-CC-CCTTHHHHHHHHHHHHE---------EEEEEEEEEEECCHHH
T ss_pred --cCeeEEEEeccCcccc----ccccceEEEEEE-ec-cCChhHHHHHHHHHHhc---------cCCCEEEEEEecccCC
Confidence 3444444444433211 233568999986 43 45566778999999999 6799999987665422
Q ss_pred h--------hHHHHHHHHcCCEEEEEcC
Q 009871 466 E--------PSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 466 ~--------~~~~~~~~~~gf~~~~~~~ 485 (523)
. ....+.+++.||++.+...
T Consensus 189 ~~~p~~~~~~~ev~~L~~~GF~l~e~i~ 216 (233)
T 4df3_A 189 VTTEPSEVYKREIKTLMDGGLEIKDVVH 216 (233)
T ss_dssp HHTCCCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCChHHHHHHHHHHHHHCCCEEEEEEc
Confidence 1 2235567789999987654
No 130
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.35 E-value=1.3e-12 Score=127.82 Aligned_cols=120 Identities=17% Similarity=0.230 Sum_probs=87.0
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-------------------------------
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE------------------------------- 123 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~------------------------------- 123 (523)
++.+|||||||+|..+..+++.+++.+|+|||+|+.|++.|+++.....
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 5789999999999999999999888899999999999999998753211
Q ss_pred ----------------------------CcEEEEEeeccCCcc-CCCCCCCceeEEEEccc----------------ccc
Q 009871 124 ----------------------------TRVSTFVCDLISDDL-SRQISPSSIDIVTMERL----------------TGK 158 (523)
Q Consensus 124 ----------------------------~~v~~~~~d~~~~~~-~~~~~~~~fD~V~~~~~----------------~~~ 158 (523)
.+++|.++|+..... ..++.+++||+|+|... ++.
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 479999999975420 00245789999999111 111
Q ss_pred ceeeecceEEecCCeEEE-------------------------eeCHHHHHHHHHh--CCCcEEEEEe
Q 009871 159 DQKISENFYVRGDGTRAF-------------------------YFSNDFLTSLFKE--NGFDVEELGL 199 (523)
Q Consensus 159 ~~~~~~~~~~~~~g~~~~-------------------------~~~~~~l~~ll~~--~Gf~~~~~~~ 199 (523)
..+ .++++|.++. .+.++++..+|.+ +||..+++..
T Consensus 206 ~~~-----~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 206 IYR-----HLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp HHH-----HEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC-
T ss_pred HHH-----HhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEec
Confidence 111 4566666654 1346778889988 9998876644
No 131
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.35 E-value=6.2e-12 Score=115.77 Aligned_cols=126 Identities=17% Similarity=0.096 Sum_probs=93.8
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++ +|||+|||+|.++..++..+ .+|+++|+++.+++.+++++..++. ++.+...|..+. ++++++|
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~d~~~~-------~~~~~~f 95 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLG-YEVTAVDQSSVGLAKAKQLAQEKGV-----KITTVQSNLADF-------DIVADAW 95 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTT-CEEEEECSSHHHHHHHHHHHHHHTC-----CEEEECCBTTTB-------SCCTTTC
T ss_pred CC-CEEEECCCCCHhHHHHHhCC-CeEEEEECCHHHHHHHHHHHHhcCC-----ceEEEEcChhhc-------CCCcCCc
Confidence 55 99999999998888888775 4899999999999999999887643 355655555432 2335689
Q ss_pred cEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec---------------CCChhHHHHHHHHcCCE
Q 009871 415 EVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR---------------QVDEPSMLSAATQCGFR 479 (523)
Q Consensus 415 D~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r---------------~~~~~~~~~~~~~~gf~ 479 (523)
|+|+++.+.+.......+++.+.++| +|||.+++..... ..+..++.+.++ ||+
T Consensus 96 D~v~~~~~~~~~~~~~~~l~~~~~~L---------~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~ 164 (202)
T 2kw5_A 96 EGIVSIFCHLPSSLRQQLYPKVYQGL---------KPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLN 164 (202)
T ss_dssp SEEEEECCCCCHHHHHHHHHHHHTTC---------CSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSC
T ss_pred cEEEEEhhcCCHHHHHHHHHHHHHhc---------CCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--Cce
Confidence 99999755444456788899999999 7799999886432 223445566665 999
Q ss_pred EEEEcC
Q 009871 480 LVDKWP 485 (523)
Q Consensus 480 ~~~~~~ 485 (523)
+..+..
T Consensus 165 v~~~~~ 170 (202)
T 2kw5_A 165 WLIANN 170 (202)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 987644
No 132
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.35 E-value=5.3e-12 Score=121.40 Aligned_cols=108 Identities=10% Similarity=0.051 Sum_probs=81.5
Q ss_pred HHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCC
Q 009871 322 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 401 (523)
Q Consensus 322 ~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~ 401 (523)
.+.+.+.... .++.+|||||||+|.++..++..+ .+|+++|+|+.+++.+++++. ++.+...|..+.
T Consensus 39 ~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~---------~~~~~~~d~~~~- 105 (263)
T 3pfg_A 39 DLAALVRRHS--PKAASLLDVACGTGMHLRHLADSF-GTVEGLELSADMLAIARRRNP---------DAVLHHGDMRDF- 105 (263)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHTTTS-SEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTC-
T ss_pred HHHHHHHhhC--CCCCcEEEeCCcCCHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCC---------CCEEEECChHHC-
Confidence 3445554432 256899999999998888888775 489999999999999988743 355666555442
Q ss_pred cchhhhhhcCCCccEEEEcc-ccCCC---CChHHHHHHHHHHhhccCCCCCCCCCcEEEEE
Q 009871 402 HIEAIKEENNEGFEVILGTD-VSYIP---EAILPLFATAKELTASSNKSLREDQQPAFILC 458 (523)
Q Consensus 402 ~~~~~~~~~~~~fD~Ii~~d-~~y~~---~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~ 458 (523)
++ +++||+|+++. ++.+. +....+++.+.++| +|||.+++.
T Consensus 106 ------~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L---------~pgG~l~i~ 150 (263)
T 3pfg_A 106 ------SL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHV---------LPDGVVVVE 150 (263)
T ss_dssp ------CC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTE---------EEEEEEEEC
T ss_pred ------Cc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhc---------CCCcEEEEE
Confidence 11 46899999996 88775 46778899999999 668888874
No 133
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.35 E-value=6.5e-12 Score=114.51 Aligned_cols=125 Identities=19% Similarity=0.250 Sum_probs=98.2
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++++. ++.+...|..+. +++.++|
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~---------~~~~~~~d~~~~-------~~~~~~~ 108 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQG-HDVLGTDLDPILIDYAKQDFP---------EARWVVGDLSVD-------QISETDF 108 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTS-------CCCCCCE
T ss_pred CCCeEEEECCCCCHHHHHHHHCC-CcEEEEcCCHHHHHHHHHhCC---------CCcEEEcccccC-------CCCCCce
Confidence 67899999999998888888774 589999999999999988752 245555555432 1235689
Q ss_pred cEEEEc-cccCCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-CChhHHHHHHHHcCCEEEEEcC
Q 009871 415 EVILGT-DVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-VDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 415 D~Ii~~-d~~y~~--~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
|+|+++ +++++. +....+++.+.++| +|+|.+++...... .+...+.+.+++.||++.+...
T Consensus 109 D~i~~~~~~~~~~~~~~~~~~l~~~~~~l---------~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 174 (195)
T 3cgg_A 109 DLIVSAGNVMGFLAEDGREPALANIHRAL---------GADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFE 174 (195)
T ss_dssp EEEEECCCCGGGSCHHHHHHHHHHHHHHE---------EEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEES
T ss_pred eEEEECCcHHhhcChHHHHHHHHHHHHHh---------CCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeec
Confidence 999998 676654 45688999999999 67999988776543 4567888999999999998865
No 134
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.35 E-value=8.8e-12 Score=116.01 Aligned_cols=125 Identities=10% Similarity=0.065 Sum_probs=97.0
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
..++.+|||||||+|.++..++..+ .+|+++|+++.+++.+++ ++. .++.+...|..+. ...+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~~~~~a~~----~~~----~~~~~~~~d~~~~--------~~~~ 106 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLA-DRVTALDGSAEMIAEAGR----HGL----DNVEFRQQDLFDW--------TPDR 106 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHGG----GCC----TTEEEEECCTTSC--------CCSS
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHh----cCC----CCeEEEecccccC--------CCCC
Confidence 3467799999999998888888884 589999999999999987 222 3567766665432 2357
Q ss_pred CccEEEEccccCCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec----------------------------
Q 009871 413 GFEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFR---------------------------- 462 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~~--~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r---------------------------- 462 (523)
+||+|+++.++++... ...+++.+.++| +|||.+++....+
T Consensus 107 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L---------~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (218)
T 3ou2_A 107 QWDAVFFAHWLAHVPDDRFEAFWESVRSAV---------APGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFR 177 (218)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHE---------EEEEEEEEEEECCCC------------CEEEEECTTSCEEE
T ss_pred ceeEEEEechhhcCCHHHHHHHHHHHHHHc---------CCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhh
Confidence 9999999999988766 489999999999 6799998875432
Q ss_pred ----CCChhHHHHHHHHcCCEEEEE
Q 009871 463 ----QVDEPSMLSAATQCGFRLVDK 483 (523)
Q Consensus 463 ----~~~~~~~~~~~~~~gf~~~~~ 483 (523)
..+..++.+.++++||++...
T Consensus 178 ~~~~~~~~~~~~~~l~~aGf~v~~~ 202 (218)
T 3ou2_A 178 IVKVFRSPAELTERLTALGWSCSVD 202 (218)
T ss_dssp EECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred HhhcCCCHHHHHHHHHHCCCEEEee
Confidence 124457888899999996554
No 135
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.35 E-value=6.2e-12 Score=116.18 Aligned_cols=126 Identities=10% Similarity=0.030 Sum_probs=90.5
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-C-cEEEEEeeccCCccCCCCCCCce
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-T-RVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~-~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++....+ . +++++++|+.+. .....+|
T Consensus 50 ~l~~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~----~~~~~~~ 123 (204)
T 3njr_A 50 ALAPRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA----LADLPLP 123 (204)
T ss_dssp HHCCCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG----GTTSCCC
T ss_pred hcCCCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh----cccCCCC
Confidence 344567889999999999999999988 7789999999999999999864332 3 799999999862 1123579
Q ss_pred eEEEEccccccceeeec-ceEEecCCeEEEee----CHHHHHHHHHhCCCcEEEEEeEee
Q 009871 148 DIVTMERLTGKDQKISE-NFYVRGDGTRAFYF----SNDFLTSLFKENGFDVEELGLCCK 202 (523)
Q Consensus 148 D~V~~~~~~~~~~~~~~-~~~~~~~g~~~~~~----~~~~l~~ll~~~Gf~~~~~~~~~~ 202 (523)
|+|++..-.... .+.. ...++++|.+++.. +..++.+.+++.|+++..+.....
T Consensus 124 D~v~~~~~~~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~i~~~~~ 182 (204)
T 3njr_A 124 EAVFIGGGGSQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLLRIDIAQA 182 (204)
T ss_dssp SEEEECSCCCHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEEEEEEEE
T ss_pred CEEEECCcccHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEEEEeecc
Confidence 999982111111 1111 11578888887643 345678888999998877765443
No 136
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.34 E-value=1.9e-12 Score=123.40 Aligned_cols=121 Identities=14% Similarity=0.097 Sum_probs=88.9
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
.++.+|||||||+|..+..++..+|+.+|+|+|+|+.|++.|+++....+ .+++++++|+.+.... +..+++||+|++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~-~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLARE-AGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTS-TTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcc-cccCCCceEEEE
Confidence 46789999999999999999999889999999999999999999875432 4699999999865211 122478999999
Q ss_pred ccc------cccceeeecceEEecCCeEEEee---CHHH---HHHHHHhCCCcEEEEEeE
Q 009871 153 ERL------TGKDQKISENFYVRGDGTRAFYF---SNDF---LTSLFKENGFDVEELGLC 200 (523)
Q Consensus 153 ~~~------~~~~~~~~~~~~~~~~g~~~~~~---~~~~---l~~ll~~~Gf~~~~~~~~ 200 (523)
..+ .....+ +++++|.++++. ..++ +...++..||.+.++...
T Consensus 158 ~a~~~~~~ll~~~~~-----~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 158 RAVAPLCVLSELLLP-----FLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp ESSCCHHHHHHHHGG-----GEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEE
T ss_pred CCcCCHHHHHHHHHH-----HcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEe
Confidence 222 111112 567778776643 2344 566777889998776543
No 137
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.34 E-value=8.3e-12 Score=118.43 Aligned_cols=138 Identities=15% Similarity=0.118 Sum_probs=103.5
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCc
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 402 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~ 402 (523)
+.+++.... .++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++++..++. ++.+...|..+.
T Consensus 27 ~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~s~~~~~~a~~~~~~~~~-----~~~~~~~d~~~~-- 96 (246)
T 1y8c_A 27 IIEKCVENN--LVFDDYLDLACGTGNLTENLCPKF-KNTWAVDLSQEMLSEAENKFRSQGL-----KPRLACQDISNL-- 96 (246)
T ss_dssp HHHHHHTTT--CCTTEEEEETCTTSTTHHHHGGGS-SEEEEECSCHHHHHHHHHHHHHTTC-----CCEEECCCGGGC--
T ss_pred HHHHHHHhC--CCCCeEEEeCCCCCHHHHHHHHCC-CcEEEEECCHHHHHHHHHHHhhcCC-----CeEEEecccccC--
Confidence 445554331 367899999999998888888775 5799999999999999999887543 345554444322
Q ss_pred chhhhhhcCCCccEEEEcc-ccCCC---CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe------------------
Q 009871 403 IEAIKEENNEGFEVILGTD-VSYIP---EAILPLFATAKELTASSNKSLREDQQPAFILCHI------------------ 460 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d-~~y~~---~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~------------------ 460 (523)
++ +++||+|+++. ++++. +....+++.+.++| +|||.+++...
T Consensus 97 -----~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L---------~pgG~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (246)
T 1y8c_A 97 -----NI-NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHL---------KEGGVFIFDINSYYKLSQVLGNNDFNYDD 161 (246)
T ss_dssp -----CC-SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTE---------EEEEEEEEEEECHHHHHTTTTTCCEEEEE
T ss_pred -----Cc-cCCceEEEEcCccccccCCHHHHHHHHHHHHHhc---------CCCcEEEEEecCHHHHHhhcCcceEEecC
Confidence 12 26899999996 88876 67788899999999 66888887322
Q ss_pred --------------------------------------ecCCChhHHHHHHHHcCCEEEEEcC
Q 009871 461 --------------------------------------FRQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 461 --------------------------------------~r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
.|..+.+++.+.++++||++.+++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~ 224 (246)
T 1y8c_A 162 DEVFYYWENQFEDDLVSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVD 224 (246)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred CcEEEEEecccCCceEEEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEc
Confidence 1223667888999999999998865
No 138
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.34 E-value=3.8e-12 Score=121.29 Aligned_cols=132 Identities=13% Similarity=0.017 Sum_probs=97.3
Q ss_pred CCCCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
..++.+|||||||+|.++..++.. ...+|+++|+++.+++.+++|+..+++. ++.+...++.+... .....
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~----~v~~~~~d~~~~~~----~~~~~ 149 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK----GARALWGRAEVLAR----EAGHR 149 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS----SEEEEECCHHHHTT----STTTT
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC----ceEEEECcHHHhhc----ccccC
Confidence 346789999999999888888876 4569999999999999999999998774 36666555432100 00113
Q ss_pred CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCC-hhHHHHHHHHcCCEEEEEcC
Q 009871 412 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD-EPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~-~~~~~~~~~~~gf~~~~~~~ 485 (523)
++||+|++..+ ..+..+++.+.++| +|||.+++........ ...+...+++.||++.++..
T Consensus 150 ~~fD~I~s~a~----~~~~~ll~~~~~~L---------kpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~ 211 (249)
T 3g89_A 150 EAYARAVARAV----APLCVLSELLLPFL---------EVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLA 211 (249)
T ss_dssp TCEEEEEEESS----CCHHHHHHHHGGGE---------EEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEE
T ss_pred CCceEEEECCc----CCHHHHHHHHHHHc---------CCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEE
Confidence 68999999743 46788999999999 6799988765432211 23566778889999988754
No 139
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.34 E-value=2.2e-12 Score=126.18 Aligned_cols=142 Identities=18% Similarity=0.234 Sum_probs=101.2
Q ss_pred CCCCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHHhcCCCC--------------------------
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLKPP-------------------------- 385 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~~n~~~~-------------------------- 385 (523)
.+++++|||||||+|.++..++.. ++.+|+++|+|+.|++.|++|+..+....
T Consensus 44 ~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 44 WFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp GTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred hcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 357899999999999988888887 46799999999999999999877654210
Q ss_pred ----------------------------CCCceEEEeeecCCCCcchhhhhhcCCCccEEEEccccCCC------CChHH
Q 009871 386 ----------------------------FLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIP------EAILP 431 (523)
Q Consensus 386 ----------------------------~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~------~~~~~ 431 (523)
...++.+...|+..... .+.++..++||+|++..++.+. +....
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~--~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~ 201 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRD--DLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKR 201 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSH--HHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCcc--ccccccCCCcCEEEEChHHHHhhhcCCHHHHHH
Confidence 01468888888865421 1122346799999999987443 37888
Q ss_pred HHHHHHHHhhccCCCCCCCCCcEEEEEEee-------cC-------------CChhHHHHHHHH--cCCEEEEEcC
Q 009871 432 LFATAKELTASSNKSLREDQQPAFILCHIF-------RQ-------------VDEPSMLSAATQ--CGFRLVDKWP 485 (523)
Q Consensus 432 l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~-------r~-------------~~~~~~~~~~~~--~gf~~~~~~~ 485 (523)
+++.+.++| +|||.+++.... +. ...+.|.+.+.+ .||+..++..
T Consensus 202 ~l~~~~~~L---------kpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 202 MFRRIYRHL---------RPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp HHHHHHHHE---------EEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC-
T ss_pred HHHHHHHHh---------CCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEec
Confidence 999999999 679999986432 11 123456677777 8998877655
No 140
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.34 E-value=3.4e-11 Score=122.15 Aligned_cols=138 Identities=14% Similarity=0.067 Sum_probs=97.1
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++++|||+|||+|.++..+|+.++.+|+++|+|+.+++.|++|++.|++.. .++.+...|..+. +..+ .....+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~--~~v~~~~~D~~~~--l~~~-~~~~~~ 285 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDM--ANHQLVVMDVFDY--FKYA-RRHHLT 285 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCC--TTEEEEESCHHHH--HHHH-HHTTCC
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc--cceEEEECCHHHH--HHHH-HHhCCC
Confidence 3678999999999999998888787899999999999999999999998751 1566665544321 1111 112458
Q ss_pred ccEEEEccccCC-----C----CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHH----HHHcCCEE
Q 009871 414 FEVILGTDVSYI-----P----EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSA----ATQCGFRL 480 (523)
Q Consensus 414 fD~Ii~~d~~y~-----~----~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~----~~~~gf~~ 480 (523)
||+|++....+. . ..+..+++.+.++| +|+|.++++...+....+.|.+. +.+.|.++
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L---------~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 356 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEIL---------SENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTY 356 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTE---------EEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCEE
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhc---------CCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCcE
Confidence 999998544432 1 12344666667888 67999999988877766655544 45678875
Q ss_pred EEEcC
Q 009871 481 VDKWP 485 (523)
Q Consensus 481 ~~~~~ 485 (523)
.....
T Consensus 357 ~~~~~ 361 (385)
T 2b78_A 357 LDLQQ 361 (385)
T ss_dssp EEEEC
T ss_pred EEeCC
Confidence 55444
No 141
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.34 E-value=1.4e-12 Score=123.98 Aligned_cols=75 Identities=19% Similarity=0.246 Sum_probs=60.3
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCC-CceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISP-SSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~-~~fD~V~~ 152 (523)
.++.+|||||||+|.++..+++.++ +|+|+|+|+.|++.|+++.. ..+++++++|+.++....++.+ ..||+|++
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT--AANISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC--CTTEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc--ccCceEEECcccccccccccccccCccEEEE
Confidence 5678999999999999999999976 59999999999999999763 3579999999987532211211 24999999
No 142
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.34 E-value=5.9e-12 Score=113.29 Aligned_cols=123 Identities=12% Similarity=0.162 Sum_probs=89.6
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCce
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
.+...++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.|++.|+++....+ .++ ++++|+.+ .+ +..+++|
T Consensus 20 ~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~-~~--~~~~~~~ 95 (178)
T 3hm2_A 20 ALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR-AF--DDVPDNP 95 (178)
T ss_dssp HHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG-GG--GGCCSCC
T ss_pred HhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh-hh--hccCCCC
Confidence 344467789999999999999999999888999999999999999998764332 368 88888754 22 2223789
Q ss_pred eEEEEcc------ccccceeeecceEEecCCeEEEee----CHHHHHHHHHhCCCcEEEEEeEe
Q 009871 148 DIVTMER------LTGKDQKISENFYVRGDGTRAFYF----SNDFLTSLFKENGFDVEELGLCC 201 (523)
Q Consensus 148 D~V~~~~------~~~~~~~~~~~~~~~~~g~~~~~~----~~~~l~~ll~~~Gf~~~~~~~~~ 201 (523)
|+|++.. ++....+ .++++|.+++.. +...+..++++.|++...+....
T Consensus 96 D~i~~~~~~~~~~~l~~~~~-----~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (178)
T 3hm2_A 96 DVIFIGGGLTAPGVFAAAWK-----RLPVGGRLVANAVTVESEQMLWALRKQFGGTISSFAISH 154 (178)
T ss_dssp SEEEECC-TTCTTHHHHHHH-----TCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEEEEEEEE
T ss_pred CEEEECCcccHHHHHHHHHH-----hcCCCCEEEEEeeccccHHHHHHHHHHcCCeeEEEEeec
Confidence 9999921 1122222 578888877632 45567888888998877665543
No 143
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.34 E-value=3.5e-12 Score=121.03 Aligned_cols=131 Identities=12% Similarity=0.053 Sum_probs=95.4
Q ss_pred CCCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
.++.+|||+|||+|.++..++.. ...+|+++|+|+.|++.+++|+..++.. ++.+...|..+... .....+
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~v~~~~~d~~~~~~----~~~~~~ 140 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE----NTTFCHDRAETFGQ----RKDVRE 140 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS----SEEEEESCHHHHTT----CTTTTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----CEEEEeccHHHhcc----cccccC
Confidence 36789999999999888877754 4568999999999999999999988763 36666554422100 000146
Q ss_pred CccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCC-hhHHHHHHHHcCCEEEEEcC
Q 009871 413 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD-EPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~-~~~~~~~~~~~gf~~~~~~~ 485 (523)
+||+|++..+ ..+..+++.+.++| +|||.+++....+... ...+.+.+++.||++.++..
T Consensus 141 ~fD~V~~~~~----~~~~~~l~~~~~~L---------kpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 141 SYDIVTARAV----ARLSVLSELCLPLV---------KKNGLFVALKAASAEEELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp CEEEEEEECC----SCHHHHHHHHGGGE---------EEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred CccEEEEecc----CCHHHHHHHHHHhc---------CCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEE
Confidence 8999998763 56889999999999 6799998865432211 23466778899999877643
No 144
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.34 E-value=1.7e-12 Score=122.87 Aligned_cols=118 Identities=11% Similarity=0.026 Sum_probs=84.2
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEEc
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTME 153 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (523)
.++.+|||||||+|.++..+++..+ .+|+|+|+|+.|++.|+++....+.+++++++|+.++ ..++++++||+|++.
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~fD~V~~d 135 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV--APTLPDGHFDGILYD 135 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH--GGGSCTTCEEEEEEC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHh--hcccCCCceEEEEEC
Confidence 5678999999999999999976543 4799999999999999998765557899999999754 124667899999981
Q ss_pred ccc---ccce-----e-eec-ceEEecCCeEEEee------------------CHHHHHHHHHhCCCcE
Q 009871 154 RLT---GKDQ-----K-ISE-NFYVRGDGTRAFYF------------------SNDFLTSLFKENGFDV 194 (523)
Q Consensus 154 ~~~---~~~~-----~-~~~-~~~~~~~g~~~~~~------------------~~~~l~~ll~~~Gf~~ 194 (523)
.+. .... . +.. ...++++|.+.+.- ..+.....+.++||..
T Consensus 136 ~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred CcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 110 0000 0 111 12688899887531 0134556788899985
No 145
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.33 E-value=5.8e-12 Score=117.89 Aligned_cols=128 Identities=20% Similarity=0.254 Sum_probs=95.5
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||+|||+|.++..++..+ .+|+++|+++.+++.++++ . .+.+...+..+. .........+|
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~---~-------~~~~~~~~~~~~---~~~~~~~~~~f 117 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRG-IEAVGVDGDRTLVDAARAA---G-------AGEVHLASYAQL---AEAKVPVGKDY 117 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTT-CEEEEEESCHHHHHHHHHT---C-------SSCEEECCHHHH---HTTCSCCCCCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHCC-CEEEEEcCCHHHHHHHHHh---c-------ccccchhhHHhh---cccccccCCCc
Confidence 45899999999998888888875 4899999999999999876 1 122332222211 00001123469
Q ss_pred cEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec------------------------------CC
Q 009871 415 EVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR------------------------------QV 464 (523)
Q Consensus 415 D~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r------------------------------~~ 464 (523)
|+|+++.+++ ......+++.+.++| +|||.+++..... ..
T Consensus 118 D~v~~~~~l~-~~~~~~~l~~~~~~L---------~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (227)
T 3e8s_A 118 DLICANFALL-HQDIIELLSAMRTLL---------VPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFR 187 (227)
T ss_dssp EEEEEESCCC-SSCCHHHHHHHHHTE---------EEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEEC
T ss_pred cEEEECchhh-hhhHHHHHHHHHHHh---------CCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEe
Confidence 9999999999 788999999999999 6799999876421 12
Q ss_pred ChhHHHHHHHHcCCEEEEEcCC
Q 009871 465 DEPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 465 ~~~~~~~~~~~~gf~~~~~~~~ 486 (523)
+..++.+.++++||++.++...
T Consensus 188 ~~~~~~~~l~~aGf~~~~~~~~ 209 (227)
T 3e8s_A 188 TLASWLNALDMAGLRLVSLQEP 209 (227)
T ss_dssp CHHHHHHHHHHTTEEEEEEECC
T ss_pred cHHHHHHHHHHcCCeEEEEecC
Confidence 4577889999999999998764
No 146
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.33 E-value=3.5e-12 Score=120.18 Aligned_cols=124 Identities=14% Similarity=0.249 Sum_probs=86.8
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEE
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.|++.|++++... .++.++++|+.......+++ ++||+|
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v 147 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKVDVI 147 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEE
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccEEEE
Confidence 3345678999999999999999999976678999999999999999886544 78999999998611001444 789999
Q ss_pred EEccccccc--ee-eec-ceEEecCCeEEEee--------------CHHHHHHHHHhCCCcEEEEE
Q 009871 151 TMERLTGKD--QK-ISE-NFYVRGDGTRAFYF--------------SNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 151 ~~~~~~~~~--~~-~~~-~~~~~~~g~~~~~~--------------~~~~l~~ll~~~Gf~~~~~~ 198 (523)
+.. +..+. .. +.. ...++++|.++..+ ..+++. +|.++||+.++..
T Consensus 148 ~~~-~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~ 211 (230)
T 1fbn_A 148 YED-VAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEV 211 (230)
T ss_dssp EEC-CCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEE
T ss_pred EEe-cCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEE
Confidence 861 10110 00 111 11567777665521 126677 8889999876654
No 147
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.33 E-value=4.6e-12 Score=127.05 Aligned_cols=115 Identities=17% Similarity=0.200 Sum_probs=92.8
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCc
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 402 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~ 402 (523)
..+.+..+....++++|||||||+|.++..++..++.+|+++|+|+ +++.|++++..|+.. .++.+...++.+.
T Consensus 54 ~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~---~~v~~~~~d~~~~-- 127 (349)
T 3q7e_A 54 YRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLD---HVVTIIKGKVEEV-- 127 (349)
T ss_dssp HHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCT---TTEEEEESCTTTC--
T ss_pred HHHHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCC---CcEEEEECcHHHc--
Confidence 3455555555678899999999999998888888877999999995 999999999999875 5688887777654
Q ss_pred chhhhhhcCCCccEEEEcccc---CCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEE
Q 009871 403 IEAIKEENNEGFEVILGTDVS---YIPEAILPLFATAKELTASSNKSLREDQQPAFIL 457 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~~---y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l 457 (523)
+++.++||+|++..+. .+...+..+++.+.++| +|||.++.
T Consensus 128 -----~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~L---------kpgG~li~ 171 (349)
T 3q7e_A 128 -----ELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWL---------APDGLIFP 171 (349)
T ss_dssp -----CCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHE---------EEEEEEES
T ss_pred -----cCCCCceEEEEEccccccccCchhHHHHHHHHHHhC---------CCCCEEcc
Confidence 2335799999997653 44678999999999999 67898864
No 148
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.33 E-value=2.4e-12 Score=118.94 Aligned_cols=146 Identities=10% Similarity=-0.015 Sum_probs=97.6
Q ss_pred HHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCC--------CCCCceEEE
Q 009871 322 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKP--------PFLAKLITK 393 (523)
Q Consensus 322 ~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~--------~~~~~v~~~ 393 (523)
.|.+++... ...++.+|||+|||+|..+..++..|. +|+++|+|+.|++.|+++...+... ....++.+.
T Consensus 10 ~l~~~~~~l-~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~ 87 (203)
T 1pjz_A 10 DLQQYWSSL-NVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIW 87 (203)
T ss_dssp HHHHHHHHH-CCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEE
T ss_pred HHHHHHHhc-ccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEE
Confidence 445555432 234778999999999998888888864 8999999999999998875431000 001356666
Q ss_pred eeecCCCCcchhhhhhcC-CCccEEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec--------
Q 009871 394 RLEWGNRDHIEAIKEENN-EGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFR-------- 462 (523)
Q Consensus 394 ~ldw~~~~~~~~~~~~~~-~~fD~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r-------- 462 (523)
..|..+.. ... ++||+|++..++++.. ....+++.+.++| +|||.+++.....
T Consensus 88 ~~d~~~l~-------~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~L---------kpgG~~~l~~~~~~~~~~~~~ 151 (203)
T 1pjz_A 88 CGDFFALT-------ARDIGHCAAFYDRAAMIALPADMRERYVQHLEALM---------PQACSGLLITLEYDQALLEGP 151 (203)
T ss_dssp EECCSSST-------HHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHS---------CSEEEEEEEEESSCSSSSSSC
T ss_pred ECccccCC-------cccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHc---------CCCcEEEEEEEecCccccCCC
Confidence 66654431 111 5899999987776543 4556899999999 7799844433221
Q ss_pred --CCChhHHHHHHHHcCCEEEEEcCC
Q 009871 463 --QVDEPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 463 --~~~~~~~~~~~~~~gf~~~~~~~~ 486 (523)
..+.+++.+.+.+ ||++..+...
T Consensus 152 ~~~~~~~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 152 PFSVPQTWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp CCCCCHHHHHHTSCS-SEEEEEEEES
T ss_pred CCCCCHHHHHHHhcC-CcEEEEeccc
Confidence 1234556666666 9998877553
No 149
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.33 E-value=3.1e-12 Score=116.66 Aligned_cols=117 Identities=19% Similarity=0.235 Sum_probs=89.0
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEEc
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTME 153 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (523)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++. .++.+.++|+.+. ++++++||+|++.
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~----~~~~~~~~d~~~~----~~~~~~~D~i~~~ 114 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDF----PEARWVVGDLSVD----QISETDFDLIVSA 114 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC----TTSEEEECCTTTS----CCCCCCEEEEEEC
T ss_pred cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhC----CCCcEEEcccccC----CCCCCceeEEEEC
Confidence 47789999999999999999988 568999999999999999875 3588999999876 5667899999983
Q ss_pred -cccccc-----e-eeec-ceEEecCCeEEEe------eCHHHHHHHHHhCCCcEEEEEeE
Q 009871 154 -RLTGKD-----Q-KISE-NFYVRGDGTRAFY------FSNDFLTSLFKENGFDVEELGLC 200 (523)
Q Consensus 154 -~~~~~~-----~-~~~~-~~~~~~~g~~~~~------~~~~~l~~ll~~~Gf~~~~~~~~ 200 (523)
.+.... . .+.. ...++++|..++. ++.+++.++++++||.++.+...
T Consensus 115 ~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 115 GNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESS
T ss_pred CcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecc
Confidence 221110 0 0000 1246777776652 47899999999999998776543
No 150
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.33 E-value=8e-11 Score=119.26 Aligned_cols=167 Identities=20% Similarity=0.192 Sum_probs=107.3
Q ss_pred EEEEEEcCceEEEEEecccccccCCCcccccchhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEc
Q 009871 286 MIEVNLRDRSFKIEVLSKEYQHTCRSTGLMLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATD 365 (523)
Q Consensus 286 ~~~~~~~~~~~~i~~~~~~~~~~~~~~G~~~W~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D 365 (523)
...+..+|..+.+.... .-.||.. |+ ......++.... .+|++|||+|||+|.++..++..++. |+++|
T Consensus 175 ~~~v~E~g~~f~vd~~~------~~~tG~f-~d-qr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avD 243 (393)
T 4dmg_A 175 VLEVEEDGLRFPIPLAL------AQKTGYY-LD-QRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARKGAY-ALAVD 243 (393)
T ss_dssp EEEEEETTEEEEEETTT------CCTTSSC-GG-GHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHTTCE-EEEEE
T ss_pred cEEEEECCEEEEEechh------ccccCcC-CC-HHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHcCCe-EEEEE
Confidence 44566677777765321 1244432 22 222234444332 25899999999999999998888766 99999
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCccEEEEccccCCC---------CChHHHHHHH
Q 009871 366 GDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIP---------EAILPLFATA 436 (523)
Q Consensus 366 ~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~---------~~~~~l~~~l 436 (523)
+|+.+++.+++|++.|++. .+ +...|. ...+..+ .+.||+|++....+.. ..+..++..+
T Consensus 244 is~~al~~a~~n~~~ng~~---~~--~~~~D~-----~~~l~~~-~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a 312 (393)
T 4dmg_A 244 KDLEALGVLDQAALRLGLR---VD--IRHGEA-----LPTLRGL-EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREA 312 (393)
T ss_dssp SCHHHHHHHHHHHHHHTCC---CE--EEESCH-----HHHHHTC-CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCC---Cc--EEEccH-----HHHHHHh-cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999875 22 222221 1111122 3349999986443332 2345777788
Q ss_pred HHHhhccCCCCCCCCCcEEEEEEeecCCChhHHH----HHHHHcCCEEEEE
Q 009871 437 KELTASSNKSLREDQQPAFILCHIFRQVDEPSML----SAATQCGFRLVDK 483 (523)
Q Consensus 437 ~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~----~~~~~~gf~~~~~ 483 (523)
.++| +|||.++++......+.+.|. +.+.+.|..+..+
T Consensus 313 ~~~L---------kpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~ 354 (393)
T 4dmg_A 313 LRLL---------AEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVH 354 (393)
T ss_dssp HHTE---------EEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHhc---------CCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEE
Confidence 8888 679999988877666665544 3445566555444
No 151
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.33 E-value=4.4e-12 Score=123.18 Aligned_cols=124 Identities=15% Similarity=0.186 Sum_probs=96.0
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++.+|||||||+|.++..++.. ..+|+++|+|+.|++.++++. .++.+...|..+. ++ +++
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-------~~-~~~ 117 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQS-GAEVLGTDNAATMIEKARQNY---------PHLHFDVADARNF-------RV-DKP 117 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC---------TTSCEEECCTTTC-------CC-SSC
T ss_pred CCCCEEEEecCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHhhC---------CCCEEEECChhhC-------Cc-CCC
Confidence 46789999999999888888774 458999999999999998764 1344555554432 12 468
Q ss_pred ccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-----------------------------C
Q 009871 414 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-----------------------------V 464 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-----------------------------~ 464 (523)
||+|+++.++++..+...+++.+.++| +|||.+++...... .
T Consensus 118 fD~v~~~~~l~~~~d~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (279)
T 3ccf_A 118 LDAVFSNAMLHWVKEPEAAIASIHQAL---------KSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFP 188 (279)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHE---------EEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCC
T ss_pred cCEEEEcchhhhCcCHHHHHHHHHHhc---------CCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCC
Confidence 999999999999889999999999999 67999988765421 1
Q ss_pred ChhHHHHHHHHcCCEEEEEc
Q 009871 465 DEPSMLSAATQCGFRLVDKW 484 (523)
Q Consensus 465 ~~~~~~~~~~~~gf~~~~~~ 484 (523)
+...+.+.+++.||++..+.
T Consensus 189 ~~~~~~~~l~~aGf~~~~~~ 208 (279)
T 3ccf_A 189 SIGEYVNILEKQGFDVTYAA 208 (279)
T ss_dssp CHHHHHHHHHHHTEEEEEEE
T ss_pred CHHHHHHHHHHcCCEEEEEE
Confidence 23456777889999987764
No 152
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.33 E-value=6.4e-12 Score=125.49 Aligned_cols=114 Identities=17% Similarity=0.202 Sum_probs=90.6
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCc
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 402 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~ 402 (523)
..+.+.......++++|||||||+|.++..+++.++.+|+++|+++ +++.+++|+..|+.. .++.+...|..+.
T Consensus 52 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~---~~i~~~~~d~~~~-- 125 (340)
T 2fyt_A 52 YRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLE---DTITLIKGKIEEV-- 125 (340)
T ss_dssp HHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCT---TTEEEEESCTTTS--
T ss_pred HHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCC---CcEEEEEeeHHHh--
Confidence 4456666656678899999999999888888888777999999997 999999999998874 4677776665543
Q ss_pred chhhhhhcCCCccEEEEccc---cCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEE
Q 009871 403 IEAIKEENNEGFEVILGTDV---SYIPEAILPLFATAKELTASSNKSLREDQQPAFI 456 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~---~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~ 456 (523)
+++.++||+|++..+ +.+...+..++..+.++| +|||.++
T Consensus 126 -----~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~L---------kpgG~li 168 (340)
T 2fyt_A 126 -----HLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYL---------AKGGSVY 168 (340)
T ss_dssp -----CCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHE---------EEEEEEE
T ss_pred -----cCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhc---------CCCcEEE
Confidence 233468999999874 444567788999999999 6789887
No 153
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.33 E-value=2.4e-12 Score=116.87 Aligned_cols=113 Identities=17% Similarity=0.312 Sum_probs=86.4
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++.+|||+|||+|.++..+++.+..+|+++|+++.+++.+++|+..+++. .++.+...|+.+. ...+ +....+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~~--~~~~-~~~~~~ 116 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEP---EKFEVRKMDANRA--LEQF-YEEKLQ 116 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCG---GGEEEEESCHHHH--HHHH-HHTTCC
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCC---cceEEEECcHHHH--HHHH-HhcCCC
Confidence 478899999999998888788777779999999999999999999998763 4577766655431 1100 112568
Q ss_pred ccEEEEccccCCCCChHHHHHHH--HHHhhccCCCCCCCCCcEEEEEEeec
Q 009871 414 FEVILGTDVSYIPEAILPLFATA--KELTASSNKSLREDQQPAFILCHIFR 462 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~~~~l~~~l--~~ll~~~~~~~~~~~~g~~~l~~~~r 462 (523)
||+|+++.+ |........++.+ .++| +|+|.++++....
T Consensus 117 fD~i~~~~~-~~~~~~~~~~~~l~~~~~L---------~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 117 FDLVLLDPP-YAKQEIVSQLEKMLERQLL---------TNEAVIVCETDKT 157 (187)
T ss_dssp EEEEEECCC-GGGCCHHHHHHHHHHTTCE---------EEEEEEEEEEETT
T ss_pred CCEEEECCC-CCchhHHHHHHHHHHhccc---------CCCCEEEEEeCCc
Confidence 999998766 6666778888888 6667 6799999887664
No 154
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.33 E-value=8.3e-12 Score=117.03 Aligned_cols=118 Identities=15% Similarity=0.204 Sum_probs=91.4
Q ss_pred HHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCC
Q 009871 320 AHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGN 399 (523)
Q Consensus 320 a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~ 399 (523)
...+.+.+..... ++.+|||||||+|.++..++..+. +|+++|+++.+++.+++++..++ .++.+...|..+
T Consensus 25 ~~~~~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~ 96 (227)
T 1ve3_A 25 IETLEPLLMKYMK--KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE-----SNVEFIVGDARK 96 (227)
T ss_dssp HHHHHHHHHHSCC--SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-----CCCEEEECCTTS
T ss_pred HHHHHHHHHHhcC--CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC-----CCceEEECchhc
Confidence 3445556655443 478999999999988888888766 89999999999999999998765 245666666544
Q ss_pred CCcchhhhhhcCCCccEEEEccc--cCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 400 RDHIEAIKEENNEGFEVILGTDV--SYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 400 ~~~~~~~~~~~~~~fD~Ii~~d~--~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
. ++++++||+|+++++ +++......+++.+.++| +|||.+++....
T Consensus 97 ~-------~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L---------~~gG~l~~~~~~ 144 (227)
T 1ve3_A 97 L-------SFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVL---------KPSGKFIMYFTD 144 (227)
T ss_dssp C-------CSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHE---------EEEEEEEEEEEC
T ss_pred C-------CCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHc---------CCCcEEEEEecC
Confidence 2 123468999999999 666667889999999999 679999887654
No 155
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.33 E-value=2.4e-12 Score=122.06 Aligned_cols=70 Identities=21% Similarity=0.368 Sum_probs=60.1
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
++.+|||+|||+|.++..+++. .+|+|+|+|+.|++.|+++......++++.++|+.++ +++ ++||+|++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~~-~~fD~v~~ 102 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMREL----ELP-EPVDAITI 102 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGC----CCS-SCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhc----CCC-CCcCEEEE
Confidence 4689999999999999998877 6799999999999999998654446789999999876 444 78999997
No 156
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.32 E-value=1.9e-11 Score=109.38 Aligned_cols=133 Identities=18% Similarity=0.066 Sum_probs=93.5
Q ss_pred chhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeee
Q 009871 317 WESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 396 (523)
Q Consensus 317 W~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ld 396 (523)
.+.+..|.+++.... .++.+|||+|||+|.++..++..+ +|+++|+|+.|++. . .++.+...|
T Consensus 7 ~~~~~~l~~~l~~~~--~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~------~-------~~~~~~~~d 69 (170)
T 3q87_B 7 GEDTYTLMDALEREG--LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES------H-------RGGNLVRAD 69 (170)
T ss_dssp CHHHHHHHHHHHHHT--CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT------C-------SSSCEEECS
T ss_pred CccHHHHHHHHHhhc--CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc------c-------cCCeEEECC
Confidence 345556666664421 356799999999998888888877 99999999999987 1 345565555
Q ss_pred cCCCCcchhhhhhcCCCccEEEEccccCCCCCh---------HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChh
Q 009871 397 WGNRDHIEAIKEENNEGFEVILGTDVSYIPEAI---------LPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEP 467 (523)
Q Consensus 397 w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~---------~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~ 467 (523)
+.+. +.+++||+|+++.+++..... ..+++.+.+.+ |+|.+++.... .....
T Consensus 70 ~~~~--------~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----------pgG~l~~~~~~-~~~~~ 130 (170)
T 3q87_B 70 LLCS--------INQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV----------TVGMLYLLVIE-ANRPK 130 (170)
T ss_dssp TTTT--------BCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC----------CSSEEEEEEEG-GGCHH
T ss_pred hhhh--------cccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC----------CCCEEEEEEec-CCCHH
Confidence 5432 223689999998766643322 44555555555 48888887654 34556
Q ss_pred HHHHHHHHcCCEEEEEcC
Q 009871 468 SMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 468 ~~~~~~~~~gf~~~~~~~ 485 (523)
.+.+.+++.||+...+..
T Consensus 131 ~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 131 EVLARLEERGYGTRILKV 148 (170)
T ss_dssp HHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHCCCcEEEEEe
Confidence 788899999999988765
No 157
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.32 E-value=1.1e-12 Score=118.14 Aligned_cols=111 Identities=15% Similarity=0.210 Sum_probs=83.3
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
..++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++|+..++.. .++.+...|+.+. .+....
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~~------~~~~~~ 99 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAE---NRFTLLKMEAERA------IDCLTG 99 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCG---GGEEEECSCHHHH------HHHBCS
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCC---CceEEEECcHHHh------HHhhcC
Confidence 3477899999999998888888887679999999999999999999988764 3566665544321 122245
Q ss_pred CccEEEEccccCCCCChHHHHHHHH--HHhhccCCCCCCCCCcEEEEEEeec
Q 009871 413 GFEVILGTDVSYIPEAILPLFATAK--ELTASSNKSLREDQQPAFILCHIFR 462 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~~~~~l~~~l~--~ll~~~~~~~~~~~~g~~~l~~~~r 462 (523)
+||+|+++.+ |.......+++.+. ++| +|||.+++....+
T Consensus 100 ~fD~i~~~~~-~~~~~~~~~~~~l~~~~~L---------~~gG~l~~~~~~~ 141 (177)
T 2esr_A 100 RFDLVFLDPP-YAKETIVATIEALAAKNLL---------SEQVMVVCETDKT 141 (177)
T ss_dssp CEEEEEECCS-SHHHHHHHHHHHHHHTTCE---------EEEEEEEEEEETT
T ss_pred CCCEEEECCC-CCcchHHHHHHHHHhCCCc---------CCCcEEEEEECCc
Confidence 7999998654 44345666777776 677 6799999887664
No 158
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=4.7e-12 Score=121.71 Aligned_cols=135 Identities=10% Similarity=0.068 Sum_probs=98.2
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCc
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 402 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~ 402 (523)
+++.+.......++.+|||||||+|.++..++..+ .+|+++|+|+.+++.++.+. ++.+...|+.+.
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~----------~~~~~~~d~~~~-- 88 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALANQG-LFVYAVEPSIVMRQQAVVHP----------QVEWFTGYAENL-- 88 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT-CEEEEECSCHHHHHSSCCCT----------TEEEECCCTTSC--
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC-CEEEEEeCCHHHHHHHHhcc----------CCEEEECchhhC--
Confidence 34444443334578899999999998888888754 58999999999988776432 456666655432
Q ss_pred chhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-------------------
Q 009871 403 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ------------------- 463 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~------------------- 463 (523)
++++++||+|++..++++......+++.+.++| + ||.+++......
T Consensus 89 -----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L---------k-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (261)
T 3ege_A 89 -----ALPDKSVDGVISILAIHHFSHLEKSFQEMQRII---------R-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDAL 153 (261)
T ss_dssp -----CSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHB---------C-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHH
T ss_pred -----CCCCCCEeEEEEcchHhhccCHHHHHHHHHHHh---------C-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhh
Confidence 234579999999999999999999999999999 7 886665544311
Q ss_pred --C-ChhHHHHHHHHcCCEEEEEcCC
Q 009871 464 --V-DEPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 464 --~-~~~~~~~~~~~~gf~~~~~~~~ 486 (523)
. ....+. .++++||....+...
T Consensus 154 ~~~~~~~~~~-~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 154 RFLPLDEQIN-LLQENTKRRVEAIPF 178 (261)
T ss_dssp TSCCHHHHHH-HHHHHHCSEEEEEEC
T ss_pred hhCCCHHHHH-HHHHcCCCceeEEEe
Confidence 1 112345 888999987776443
No 159
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.32 E-value=9.6e-12 Score=119.16 Aligned_cols=108 Identities=11% Similarity=0.154 Sum_probs=85.4
Q ss_pred HhcCCCCCCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchh
Q 009871 327 LARNPTIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEA 405 (523)
Q Consensus 327 l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~ 405 (523)
+.......++.+|||||||+|.++..++... ..+|+++|+++.+++.++++. .++.+...|..+.
T Consensus 25 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~----- 90 (259)
T 2p35_A 25 LLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---------PNTNFGKADLATW----- 90 (259)
T ss_dssp HHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---------TTSEEEECCTTTC-----
T ss_pred HHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---------CCcEEEECChhhc-----
Confidence 3343344577899999999998888888773 457999999999999998871 3456666555432
Q ss_pred hhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 009871 406 IKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 406 ~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
+ .+++||+|+++.++++......+++.+.++| +|||.+++...
T Consensus 91 --~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L---------~pgG~l~~~~~ 133 (259)
T 2p35_A 91 --K-PAQKADLLYANAVFQWVPDHLAVLSQLMDQL---------ESGGVLAVQMP 133 (259)
T ss_dssp --C-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGE---------EEEEEEEEEEE
T ss_pred --C-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhc---------CCCeEEEEEeC
Confidence 1 2568999999999999989999999999999 67999988754
No 160
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.32 E-value=1.9e-12 Score=121.52 Aligned_cols=76 Identities=13% Similarity=0.183 Sum_probs=59.5
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCC-HHHHHHH---HhccccC-CCcEEEEEeeccCCccCCCCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFS-PRAVNLV---MTHKDFT-ETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S-~~~l~~a---~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
.++.+|||||||+|.++..++++.++.+|+|||+| +.|++.| +++.... ..++.+.++|+..+ +..+ .+.+|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l--~~~~-~d~v~ 99 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESL--PFEL-KNIAD 99 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBC--CGGG-TTCEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHh--hhhc-cCeEE
Confidence 56789999999999999999988888999999999 7788777 7665433 35799999999866 2111 25677
Q ss_pred EEEE
Q 009871 149 IVTM 152 (523)
Q Consensus 149 ~V~~ 152 (523)
.|++
T Consensus 100 ~i~~ 103 (225)
T 3p2e_A 100 SISI 103 (225)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7665
No 161
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.32 E-value=5.6e-12 Score=122.24 Aligned_cols=144 Identities=15% Similarity=0.173 Sum_probs=102.5
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeee
Q 009871 318 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 396 (523)
Q Consensus 318 ~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ld 396 (523)
+.+..+.+.+..... .++.+|||+|||+|.++..++.. ...+|+++|+|+.+++.+++|+..++.. ++.+...|
T Consensus 93 ~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~----~v~~~~~d 167 (276)
T 2b3t_A 93 PDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK----NIHILQSD 167 (276)
T ss_dssp TTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC----SEEEECCS
T ss_pred chHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEcc
Confidence 334445555544322 46779999999999988888865 4569999999999999999999988763 47777666
Q ss_pred cCCCCcchhhhhhcCCCccEEEEccccCCC-------------------------CChHHHHHHHHHHhhccCCCCCCCC
Q 009871 397 WGNRDHIEAIKEENNEGFEVILGTDVSYIP-------------------------EAILPLFATAKELTASSNKSLREDQ 451 (523)
Q Consensus 397 w~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~-------------------------~~~~~l~~~l~~ll~~~~~~~~~~~ 451 (523)
+.+. +..++||+|+++...... ..+..+++.+.++| +|
T Consensus 168 ~~~~--------~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~L---------kp 230 (276)
T 2b3t_A 168 WFSA--------LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNAL---------VS 230 (276)
T ss_dssp TTGG--------GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGE---------EE
T ss_pred hhhh--------cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhc---------CC
Confidence 6432 224689999997433221 23466778888888 67
Q ss_pred CcEEEEEEeecCCChhHHHHHHHHcCCEEEEEcC
Q 009871 452 QPAFILCHIFRQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 452 ~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
||.+++.... .....+.+.+++.||+..+++.
T Consensus 231 gG~l~~~~~~--~~~~~~~~~l~~~Gf~~v~~~~ 262 (276)
T 2b3t_A 231 GGFLLLEHGW--QQGEAVRQAFILAGYHDVETCR 262 (276)
T ss_dssp EEEEEEECCS--SCHHHHHHHHHHTTCTTCCEEE
T ss_pred CCEEEEEECc--hHHHHHHHHHHHCCCcEEEEEe
Confidence 9999886533 3455678888899997655443
No 162
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.32 E-value=2.5e-12 Score=118.68 Aligned_cols=108 Identities=6% Similarity=0.003 Sum_probs=83.9
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||+|||+|.++..+++.++.+|+++|+|+.|++.+++|+..++. .++.+...|+.+ ..+....+|
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~----~~v~~~~~D~~~------~~~~~~~~f 123 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA----GNARVVNSNAMS------FLAQKGTPH 123 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC----CSEEEECSCHHH------HHSSCCCCE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC----CcEEEEECCHHH------HHhhcCCCC
Confidence 6789999999999888877888777999999999999999999999876 346665544322 111234689
Q ss_pred cEEEEccccCCCCChHHHHHHHHH--HhhccCCCCCCCCCcEEEEEEeec
Q 009871 415 EVILGTDVSYIPEAILPLFATAKE--LTASSNKSLREDQQPAFILCHIFR 462 (523)
Q Consensus 415 D~Ii~~d~~y~~~~~~~l~~~l~~--ll~~~~~~~~~~~~g~~~l~~~~r 462 (523)
|+|++... |.......+++.+.+ +| +|+|.+++.....
T Consensus 124 D~V~~~~p-~~~~~~~~~l~~l~~~~~L---------~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 124 NIVFVDPP-FRRGLLEETINLLEDNGWL---------ADEALIYVESEVE 163 (202)
T ss_dssp EEEEECCS-SSTTTHHHHHHHHHHTTCE---------EEEEEEEEEEEGG
T ss_pred CEEEECCC-CCCCcHHHHHHHHHhcCcc---------CCCcEEEEEECCC
Confidence 99998655 777778888888876 37 6799998877664
No 163
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.32 E-value=4.6e-12 Score=121.14 Aligned_cols=111 Identities=13% Similarity=0.092 Sum_probs=83.4
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCc
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 402 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~ 402 (523)
|.++|.... ..+.+|||||||+|.++..++..+ .+|+++|+|+.|++.|++ ..++.+...+..+.
T Consensus 29 l~~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~~~-~~v~gvD~s~~ml~~a~~----------~~~v~~~~~~~e~~-- 93 (257)
T 4hg2_A 29 LFRWLGEVA--PARGDALDCGCGSGQASLGLAEFF-ERVHAVDPGEAQIRQALR----------HPRVTYAVAPAEDT-- 93 (257)
T ss_dssp HHHHHHHHS--SCSSEEEEESCTTTTTHHHHHTTC-SEEEEEESCHHHHHTCCC----------CTTEEEEECCTTCC--
T ss_pred HHHHHHHhc--CCCCCEEEEcCCCCHHHHHHHHhC-CEEEEEeCcHHhhhhhhh----------cCCceeehhhhhhh--
Confidence 345665543 245699999999998888888776 589999999999987653 13566665554332
Q ss_pred chhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC
Q 009871 403 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ 463 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~ 463 (523)
++++++||+|+++.++++.+ .+.+++.+.++| +|||.+.+......
T Consensus 94 -----~~~~~sfD~v~~~~~~h~~~-~~~~~~e~~rvL---------kpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 94 -----GLPPASVDVAIAAQAMHWFD-LDRFWAELRRVA---------RPGAVFAAVTYGLT 139 (257)
T ss_dssp -----CCCSSCEEEEEECSCCTTCC-HHHHHHHHHHHE---------EEEEEEEEEEECCC
T ss_pred -----cccCCcccEEEEeeehhHhh-HHHHHHHHHHHc---------CCCCEEEEEECCCC
Confidence 35578999999999997764 889999999999 67998876554433
No 164
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.32 E-value=6e-12 Score=117.52 Aligned_cols=120 Identities=13% Similarity=0.210 Sum_probs=88.7
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhh-CCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeE
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDI 149 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 149 (523)
+...++.+|||+|||+|.++..+++. +|..+|+|+|+|+.|++.+++++.. ..++..+.+|....... ++..+++|+
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-~~ni~~V~~d~~~p~~~-~~~~~~vDv 150 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-RRNIFPILGDARFPEKY-RHLVEGVDG 150 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-CTTEEEEESCTTCGGGG-TTTCCCEEE
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-hcCeeEEEEeccCcccc-ccccceEEE
Confidence 45578999999999999999999998 7889999999999999999987643 36789999998764322 456789999
Q ss_pred EEE-cc-------ccccceeeecceEEecCCeEEEee-------------CHHHHHHHHHhCCCcEEEE
Q 009871 150 VTM-ER-------LTGKDQKISENFYVRGDGTRAFYF-------------SNDFLTSLFKENGFDVEEL 197 (523)
Q Consensus 150 V~~-~~-------~~~~~~~~~~~~~~~~~g~~~~~~-------------~~~~l~~ll~~~Gf~~~~~ 197 (523)
|++ .. ++.... .+++++|.++... ..++..+.|+++||++++.
T Consensus 151 Vf~d~~~~~~~~~~l~~~~-----r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~ 214 (233)
T 4df3_A 151 LYADVAQPEQAAIVVRNAR-----FFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDV 214 (233)
T ss_dssp EEECCCCTTHHHHHHHHHH-----HHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEeccCChhHHHHHHHHH-----HhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEE
Confidence 998 11 111111 2577777765421 1234466778899998665
No 165
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.31 E-value=5.1e-12 Score=116.87 Aligned_cols=117 Identities=15% Similarity=0.161 Sum_probs=85.7
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCCceeEEEEc
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTME 153 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (523)
++.+|||+|||+|..+..+++..|+.+|+|+|+|+.|++.|+++....+ .++++.++|+.+. + ++++||+|++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~-~~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEF----P-SEPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTS----C-CCSCEEEEECS
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhC----C-ccCCcCEEEEe
Confidence 4789999999999999999998888999999999999999998764332 3599999999865 2 35789999982
Q ss_pred cccccceeeec-ceEEecCCeEEEe---eCHHHHHHHHHhCCCcEEEEE
Q 009871 154 RLTGKDQKISE-NFYVRGDGTRAFY---FSNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 154 ~~~~~~~~~~~-~~~~~~~g~~~~~---~~~~~l~~ll~~~Gf~~~~~~ 198 (523)
.+......+.. .-.++++|.+++. ...+++.+++. ||..+++.
T Consensus 140 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 140 AFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVV 186 (207)
T ss_dssp CSSSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEE
T ss_pred ccCCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeee
Confidence 22110000000 1156777877664 46778888776 89876643
No 166
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.31 E-value=3.7e-12 Score=118.50 Aligned_cols=119 Identities=13% Similarity=0.123 Sum_probs=87.5
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
+++.+|||||||+|.++..+++.+|..+|+|+|+++.+++.|+++...++ .++++.++|..+. ..+++.||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~----~~~~~~~D~Iv 95 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSA----FEEADNIDTIT 95 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG----CCGGGCCCEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhc----cccccccCEEE
Confidence 35789999999999999999999887889999999999999999875443 5799999999764 22334799987
Q ss_pred E--------ccccccceeeecceEEecCCeEEE--eeCHHHHHHHHHhCCCcEEEEEeEe
Q 009871 152 M--------ERLTGKDQKISENFYVRGDGTRAF--YFSNDFLTSLFKENGFDVEELGLCC 201 (523)
Q Consensus 152 ~--------~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~l~~ll~~~Gf~~~~~~~~~ 201 (523)
. .+++..+.. .+++.|.++. ....+.+++.|.+.||.+++...+.
T Consensus 96 iaGmGg~lI~~IL~~~~~-----~l~~~~~lIlqp~~~~~~lr~~L~~~Gf~i~~E~lv~ 150 (230)
T 3lec_A 96 ICGMGGRLIADILNNDID-----KLQHVKTLVLQPNNREDDLRKWLAANDFEIVAEDILT 150 (230)
T ss_dssp EEEECHHHHHHHHHHTGG-----GGTTCCEEEEEESSCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred EeCCchHHHHHHHHHHHH-----HhCcCCEEEEECCCChHHHHHHHHHCCCEEEEEEEEE
Confidence 6 222222221 1223333322 1258899999999999988766543
No 167
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.31 E-value=3.3e-12 Score=117.15 Aligned_cols=151 Identities=13% Similarity=0.062 Sum_probs=101.2
Q ss_pred CCCCeEEEECCCccHHHHHHHhc--CCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAG--SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~--~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
.++.+|||+|||+|.++..++.. ...+|+++|+++.+++.+++|+..++.. .++.+...|..+. ....+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~------~~~~~ 91 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI---DRVTLIKDGHQNM------DKYID 91 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCG---GGEEEECSCGGGG------GGTCC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CCeEEEECCHHHH------hhhcc
Confidence 46789999999999888888887 3459999999999999999999998763 4567766554322 12335
Q ss_pred CCccEEEEccccCCC---------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCC----hhHH---HHHHHH
Q 009871 412 EGFEVILGTDVSYIP---------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD----EPSM---LSAATQ 475 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~---------~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~----~~~~---~~~~~~ 475 (523)
++||+|+++..++.. .....+++.+.++| +|||.++++....... ...+ +..+..
T Consensus 92 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L---------k~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (197)
T 3eey_A 92 CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELL---------VTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQ 162 (197)
T ss_dssp SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHE---------EEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCT
T ss_pred CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhC---------cCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCC
Confidence 789999987544221 13356899999999 6799998876432211 1122 222344
Q ss_pred cCCEEEEEcCCCCCCCCcchhhccccc
Q 009871 476 CGFRLVDKWPSKNSASPSESIISSWFS 502 (523)
Q Consensus 476 ~gf~~~~~~~~~~~~~~~~~~~~~~~~ 502 (523)
.+|.+......+....+...++..+.+
T Consensus 163 ~~~~v~~~~~~~~~~~pp~~~~~~~~~ 189 (197)
T 3eey_A 163 KKFIVQRTDFINQANCPPILVCIEKIS 189 (197)
T ss_dssp TTEEEEEEEETTCCSCCCEEEEEEECC
T ss_pred CcEEEEEEEeccCccCCCeEEEEEEcc
Confidence 678887775544444444444444433
No 168
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.31 E-value=5.1e-12 Score=117.67 Aligned_cols=122 Identities=14% Similarity=0.088 Sum_probs=92.8
Q ss_pred cchhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEee
Q 009871 316 LWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 395 (523)
Q Consensus 316 ~W~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~l 395 (523)
.|-....+..++.......++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++++..+ .++.+...
T Consensus 32 ~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~ 104 (216)
T 3ofk_A 32 NPFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPRAIGRACQRTKRW------SHISWAAT 104 (216)
T ss_dssp CHHHHHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHHHHHHHHHHTTTC------SSEEEEEC
T ss_pred CHhHHHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcccC------CCeEEEEc
Confidence 344444455555544444577899999999998888888876 48999999999999999887653 35677776
Q ss_pred ecCCCCcchhhhhhcCCCccEEEEccccCCCCCh---HHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 396 EWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAI---LPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 396 dw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~---~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
|..+.. +.++||+|+++.++++.... ..+++.+.++| +|||.++++...
T Consensus 105 d~~~~~--------~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L---------~pgG~l~~~~~~ 156 (216)
T 3ofk_A 105 DILQFS--------TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKML---------APGGHLVFGSAR 156 (216)
T ss_dssp CTTTCC--------CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTE---------EEEEEEEEEEEC
T ss_pred chhhCC--------CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHc---------CCCCEEEEEecC
Confidence 665432 25689999999999987766 46688999999 679999987643
No 169
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.31 E-value=1.3e-11 Score=114.01 Aligned_cols=113 Identities=17% Similarity=0.194 Sum_probs=87.1
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|+++..... .++++.++|+.+. .+++||+|++
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~------~~~~fD~i~~ 131 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD------VDGKFDLIVA 131 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT------CCSCEEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc------CCCCceEEEE
Confidence 46789999999999999998875 45689999999999999999765333 3489999999743 3579999999
Q ss_pred -------ccccccceeeecceEEecCCeEEEe----eCHHHHHHHHHhCCCcEEEEE
Q 009871 153 -------ERLTGKDQKISENFYVRGDGTRAFY----FSNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 153 -------~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~l~~ll~~~Gf~~~~~~ 198 (523)
..++....+ .++++|.+++. .+.+++.++++++||+++.+.
T Consensus 132 ~~~~~~~~~~l~~~~~-----~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 132 NILAEILLDLIPQLDS-----HLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp ESCHHHHHHHGGGSGG-----GEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEE
T ss_pred CCcHHHHHHHHHHHHH-----hcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEee
Confidence 222233333 56777877652 367889999999999987654
No 170
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.31 E-value=7.1e-12 Score=117.56 Aligned_cols=121 Identities=15% Similarity=0.227 Sum_probs=85.8
Q ss_pred hhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 69 ~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
+.++ .++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++. .++.++|+.+... ++++++||
T Consensus 27 ~~~~-~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~~~--~~~~~~fD 95 (230)
T 3cc8_A 27 KHIK-KEWKEVLDIGCSSGALGAAIKEN--GTRVSGIEAFPEAAEQAKEKL------DHVVLGDIETMDM--PYEEEQFD 95 (230)
T ss_dssp TTCC-TTCSEEEEETCTTSHHHHHHHTT--TCEEEEEESSHHHHHHHHTTS------SEEEESCTTTCCC--CSCTTCEE
T ss_pred HHhc-cCCCcEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC------CcEEEcchhhcCC--CCCCCccC
Confidence 3444 57789999999999999999988 478999999999999999864 2688899875322 56778999
Q ss_pred EEEE-----------------ccccccceeeecceEE-----------------ecC----CeEEEeeCHHHHHHHHHhC
Q 009871 149 IVTM-----------------ERLTGKDQKISENFYV-----------------RGD----GTRAFYFSNDFLTSLFKEN 190 (523)
Q Consensus 149 ~V~~-----------------~~~~~~~~~~~~~~~~-----------------~~~----g~~~~~~~~~~l~~ll~~~ 190 (523)
+|++ .+.+++++.+.-.... ... .....+++.+++.++++++
T Consensus 96 ~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 175 (230)
T 3cc8_A 96 CVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKA 175 (230)
T ss_dssp EEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHT
T ss_pred EEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHc
Confidence 9999 2223333332210000 000 0112346899999999999
Q ss_pred CCcEEEEEeE
Q 009871 191 GFDVEELGLC 200 (523)
Q Consensus 191 Gf~~~~~~~~ 200 (523)
||+++.+...
T Consensus 176 Gf~~~~~~~~ 185 (230)
T 3cc8_A 176 GYSISKVDRV 185 (230)
T ss_dssp TEEEEEEEEE
T ss_pred CCeEEEEEec
Confidence 9998777553
No 171
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.31 E-value=2.1e-11 Score=120.98 Aligned_cols=170 Identities=15% Similarity=0.079 Sum_probs=109.1
Q ss_pred EEEEEEcCceEEEEEecccccccCCCcccccchhH--HHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEE
Q 009871 286 MIEVNLRDRSFKIEVLSKEYQHTCRSTGLMLWESA--HLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVA 363 (523)
Q Consensus 286 ~~~~~~~~~~~~i~~~~~~~~~~~~~~G~~~W~~a--~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~ 363 (523)
...+..+|..+.+..... ..+|...-... ..+++++.. ..++.+|||||||+|.++..++..++ +|++
T Consensus 111 ~~~i~e~g~~f~v~~~~~------~~tg~f~dq~~~~~~l~~~~~~---~~~~~~VLDlgcGtG~~sl~la~~ga-~V~~ 180 (332)
T 2igt_A 111 TWPLSLLGVEFLGRFTAF------RHVGVFPEQIVHWEWLKNAVET---ADRPLKVLNLFGYTGVASLVAAAAGA-EVTH 180 (332)
T ss_dssp EEEEEETTEEEEEECCSS------SCCSCCGGGHHHHHHHHHHHHH---SSSCCEEEEETCTTCHHHHHHHHTTC-EEEE
T ss_pred ceEEEECCEEEEEecCcc------ccceechHHHHHHHHHHHHHHh---cCCCCcEEEcccccCHHHHHHHHcCC-EEEE
Confidence 445666787777763221 12343321111 124455432 13567999999999999988888876 9999
Q ss_pred EcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhh--cCCCccEEEEccccCCC----------CChHH
Q 009871 364 TDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE--NNEGFEVILGTDVSYIP----------EAILP 431 (523)
Q Consensus 364 ~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~--~~~~fD~Ii~~d~~y~~----------~~~~~ 431 (523)
+|+|+.+++.+++|+..|++.. .++.+...|..+. +... ...+||+|++....|.. ..+..
T Consensus 181 VD~s~~al~~a~~n~~~~gl~~--~~v~~i~~D~~~~-----l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ 253 (332)
T 2igt_A 181 VDASKKAIGWAKENQVLAGLEQ--APIRWICEDAMKF-----IQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPL 253 (332)
T ss_dssp ECSCHHHHHHHHHHHHHHTCTT--SCEEEECSCHHHH-----HHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCc--cceEEEECcHHHH-----HHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHH
Confidence 9999999999999999998742 1366654443221 1111 14689999996543332 23567
Q ss_pred HHHHHHHHhhccCCCCCCCCCcEEEEEEeec-CCChhHHHHHHH----HcCCEEE
Q 009871 432 LFATAKELTASSNKSLREDQQPAFILCHIFR-QVDEPSMLSAAT----QCGFRLV 481 (523)
Q Consensus 432 l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r-~~~~~~~~~~~~----~~gf~~~ 481 (523)
+++.+.++| +|+|.+++..... ..+...|.+.++ +.|+++.
T Consensus 254 ll~~~~~~L---------kpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 254 MLDICREIL---------SPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp HHHHHHHTB---------CTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred HHHHHHHhc---------CcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 888888999 6799866655443 334445554444 6788876
No 172
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.31 E-value=5.6e-12 Score=117.68 Aligned_cols=125 Identities=12% Similarity=0.129 Sum_probs=85.8
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHH----Hhcccc-CCCcEEEEEeeccCCccCCCCCCCce
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLV----MTHKDF-TETRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a----~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
..++.+|||||||+|.++..+++.+|+.+|+|+|+|+.|++.+ +++... ...+++++++|+.++ ++++++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l----~~~~~~- 99 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL----PPLSGV- 99 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC----CSCCCE-
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC----CCCCCC-
Confidence 4678899999999999999999999899999999999998863 322222 235899999999987 556666
Q ss_pred eEEEE-c--------cccccceeeec-ceEEecCCeEEEee------------------C----HHHHHHHHHhCCCcEE
Q 009871 148 DIVTM-E--------RLTGKDQKISE-NFYVRGDGTRAFYF------------------S----NDFLTSLFKENGFDVE 195 (523)
Q Consensus 148 D~V~~-~--------~~~~~~~~~~~-~~~~~~~g~~~~~~------------------~----~~~l~~ll~~~Gf~~~ 195 (523)
|.|++ . .+......+.. ...++++|.+++.+ + .+++..++.++||++.
T Consensus 100 d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~ 179 (218)
T 3mq2_A 100 GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLA 179 (218)
T ss_dssp EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEE
T ss_pred CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCce
Confidence 76664 1 00000111100 11466677665421 1 3457889999999998
Q ss_pred EEEeEee
Q 009871 196 ELGLCCK 202 (523)
Q Consensus 196 ~~~~~~~ 202 (523)
++.....
T Consensus 180 ~~~~~~~ 186 (218)
T 3mq2_A 180 DCRYLEP 186 (218)
T ss_dssp EEEEECH
T ss_pred eeeccch
Confidence 8876543
No 173
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.31 E-value=2.7e-12 Score=125.34 Aligned_cols=142 Identities=11% Similarity=0.068 Sum_probs=95.9
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCC-----------C---------------
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPF-----------L--------------- 387 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~-----------~--------------- 387 (523)
.++.+|||||||+|.+..+++.....+|+++|+|+.|++.+++++..+..... .
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 37789999999999744444444556999999999999999887653211000 0
Q ss_pred CceEEEeeecCCCCcchhhhhhcCCCccEEEEccccCC----CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee--
Q 009871 388 AKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYI----PEAILPLFATAKELTASSNKSLREDQQPAFILCHIF-- 461 (523)
Q Consensus 388 ~~v~~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~----~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~-- 461 (523)
..+.+...|..+...+.. ..+++++||+|+++.++++ ......+++.+.++| +|||.+++....
T Consensus 150 ~~~~~~~~D~~~~~~~~~-~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~L---------kpGG~l~~~~~~~~ 219 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGA-GSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLL---------RPGGHLLLIGALEE 219 (289)
T ss_dssp HEEEEECCCTTSSSTTCS-SCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTE---------EEEEEEEEEEEESC
T ss_pred hhceEEecccCCCCCccc-cccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhc---------CCCCEEEEEEecCc
Confidence 012333334333111100 0123457999999999887 446889999999999 679999986422
Q ss_pred ------------cCCChhHHHHHHHHcCCEEEEEcC
Q 009871 462 ------------RQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 462 ------------r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
+..+...+.+.++++||++..+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 255 (289)
T 2g72_A 220 SWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRT 255 (289)
T ss_dssp CEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred ceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeE
Confidence 234567788999999999988754
No 174
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.31 E-value=4e-12 Score=117.18 Aligned_cols=112 Identities=11% Similarity=0.029 Sum_probs=84.0
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC-
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG- 413 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~- 413 (523)
++.+|||+|||+|.++..+++.++.+|+++|+|+.|++.+++|+..++... .++.+...|..+. +..+..++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~--~~v~~~~~d~~~~-----~~~~~~~~~ 125 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSS--EQAEVINQSSLDF-----LKQPQNQPH 125 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCT--TTEEEECSCHHHH-----TTSCCSSCC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCc--cceEEEECCHHHH-----HHhhccCCC
Confidence 678999999999988888788877899999999999999999999987620 2456554443211 01112457
Q ss_pred ccEEEEccccCCCCChHHHHHHH--HHHhhccCCCCCCCCCcEEEEEEeecC
Q 009871 414 FEVILGTDVSYIPEAILPLFATA--KELTASSNKSLREDQQPAFILCHIFRQ 463 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~~~~l~~~l--~~ll~~~~~~~~~~~~g~~~l~~~~r~ 463 (523)
||+|+++.+ |.......+++.+ .++| +|||.++++...+.
T Consensus 126 fD~I~~~~~-~~~~~~~~~l~~~~~~~~L---------kpgG~l~i~~~~~~ 167 (201)
T 2ift_A 126 FDVVFLDPP-FHFNLAEQAISLLCENNWL---------KPNALIYVETEKDK 167 (201)
T ss_dssp EEEEEECCC-SSSCHHHHHHHHHHHTTCE---------EEEEEEEEEEESSS
T ss_pred CCEEEECCC-CCCccHHHHHHHHHhcCcc---------CCCcEEEEEECCCC
Confidence 999999766 6667778888888 4468 67999998877654
No 175
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.31 E-value=8.1e-12 Score=121.73 Aligned_cols=118 Identities=19% Similarity=0.294 Sum_probs=85.1
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEEc
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTME 153 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (523)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++....+.+++++++|+.+. ++ +++||+|++.
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~-~~~fD~i~~~ 191 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAA----NI-QENYDFIVST 191 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGC----CC-CSCEEEEEEC
T ss_pred cCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccc----cc-cCCccEEEEc
Confidence 46889999999999999999988 56899999999999999998755445899999999876 33 7899999991
Q ss_pred c---ccccce--eeec--ceEEecCCeEE-----------------EeeCHHHHHHHHHhCCCcEEEEEeE
Q 009871 154 R---LTGKDQ--KISE--NFYVRGDGTRA-----------------FYFSNDFLTSLFKENGFDVEELGLC 200 (523)
Q Consensus 154 ~---~~~~~~--~~~~--~~~~~~~g~~~-----------------~~~~~~~l~~ll~~~Gf~~~~~~~~ 200 (523)
. ...... .+.. ...++++|.++ +.++.+++.+++. +|+++.....
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~ 260 (286)
T 3m70_A 192 VVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYK--DWEFLEYNEN 260 (286)
T ss_dssp SSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTT--TSEEEEEECC
T ss_pred cchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhc--CCEEEEEEcc
Confidence 1 100000 0000 01345555432 2457889999997 4888776543
No 176
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.31 E-value=8.4e-12 Score=126.38 Aligned_cols=119 Identities=18% Similarity=0.142 Sum_probs=95.3
Q ss_pred HHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCC
Q 009871 321 HLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNR 400 (523)
Q Consensus 321 ~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~ 400 (523)
..+.+++..+....++++|||||||+|.++..++..++.+|+++|++ .|++.+++++..|+.. .++.+...|..+.
T Consensus 49 ~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~ 124 (376)
T 3r0q_C 49 DAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLD---HIVEVIEGSVEDI 124 (376)
T ss_dssp HHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCT---TTEEEEESCGGGC
T ss_pred HHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCC---CeEEEEECchhhc
Confidence 34566777777778899999999999998888888887799999999 9999999999999876 5677777666443
Q ss_pred CcchhhhhhcCCCccEEEEccccCC---CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 009871 401 DHIEAIKEENNEGFEVILGTDVSYI---PEAILPLFATAKELTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 401 ~~~~~~~~~~~~~fD~Ii~~d~~y~---~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
. + +++||+|++..+.|. ...+..+++.+.++| +|||.+++...
T Consensus 125 ~-------~-~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~L---------kpgG~li~~~~ 170 (376)
T 3r0q_C 125 S-------L-PEKVDVIISEWMGYFLLRESMFDSVISARDRWL---------KPTGVMYPSHA 170 (376)
T ss_dssp C-------C-SSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHE---------EEEEEEESSEE
T ss_pred C-------c-CCcceEEEEcChhhcccchHHHHHHHHHHHhhC---------CCCeEEEEecC
Confidence 1 2 268999999765555 366888999999999 67998876433
No 177
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.30 E-value=5.2e-12 Score=118.90 Aligned_cols=121 Identities=14% Similarity=0.151 Sum_probs=88.7
Q ss_pred CCCCeEEEECCC-ccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCG-AGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG-~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
.++.+|||+||| +|.++..+++.. +.+|+|+|+|+.|++.|+++....+.+++++++|+.... ++++++||+|++
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~---~~~~~~fD~I~~ 129 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIK---GVVEGTFDVIFS 129 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSST---TTCCSCEEEEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhh---hcccCceeEEEE
Confidence 578899999999 999999999885 578999999999999999987655458999999975331 455689999998
Q ss_pred c-cccccc---------------------ee-eec-ceEEecCCeEEEee-----CHHHHHHHHHhCCCcEEEEE
Q 009871 153 E-RLTGKD---------------------QK-ISE-NFYVRGDGTRAFYF-----SNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 153 ~-~~~~~~---------------------~~-~~~-~~~~~~~g~~~~~~-----~~~~l~~ll~~~Gf~~~~~~ 198 (523)
. .+.... .. +.. ...++++|.+++.. ..+++.+++++.||.+..+.
T Consensus 130 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 130 APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp CCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEE
Confidence 1 110000 00 000 12578888887643 35678899999999776553
No 178
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.30 E-value=1.3e-11 Score=117.64 Aligned_cols=146 Identities=10% Similarity=-0.051 Sum_probs=96.4
Q ss_pred HHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHh----------cCCC---CCCC
Q 009871 322 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTA----------NLKP---PFLA 388 (523)
Q Consensus 322 ~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~----------n~~~---~~~~ 388 (523)
.+.+++.......++.+|||+|||+|..+..++..|. +|+++|+|+.|++.|+++... ++.. ....
T Consensus 55 ~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (252)
T 2gb4_A 55 LLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSG 133 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTS
T ss_pred HHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCC
Confidence 3455554322223678999999999999888888865 899999999999999765421 0000 0113
Q ss_pred ceEEEeeecCCCCcchhhhhhc-CCCccEEEEccccCCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEE-Eeec--
Q 009871 389 KLITKRLEWGNRDHIEAIKEEN-NEGFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILC-HIFR-- 462 (523)
Q Consensus 389 ~v~~~~ldw~~~~~~~~~~~~~-~~~fD~Ii~~d~~y~~--~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~-~~~r-- 462 (523)
++.+...|..+. +.. .++||+|++..++.+. +....+++.+.++| +|||.+++. ....
T Consensus 134 ~i~~~~~D~~~l-------~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~L---------kpGG~l~l~~~~~~~~ 197 (252)
T 2gb4_A 134 SISLYCCSIFDL-------PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLL---------RKEFQYLVAVLSYDPT 197 (252)
T ss_dssp SEEEEESCTTTG-------GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTE---------EEEEEEEEEEEECCTT
T ss_pred ceEEEECccccC-------CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHc---------CCCeEEEEEEEecCCc
Confidence 566666554432 112 2689999988776553 34667899999999 679998643 3211
Q ss_pred -------CCChhHHHHHHHHcCCEEEEEcC
Q 009871 463 -------QVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 463 -------~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
..+.+++.+.+.. +|++.....
T Consensus 198 ~~~g~~~~~~~~el~~~l~~-~f~v~~~~~ 226 (252)
T 2gb4_A 198 KHAGPPFYVPSAELKRLFGT-KCSMQCLEE 226 (252)
T ss_dssp SCCCSSCCCCHHHHHHHHTT-TEEEEEEEE
T ss_pred cCCCCCCCCCHHHHHHHhhC-CeEEEEEec
Confidence 1344566666665 599877653
No 179
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.30 E-value=1.4e-11 Score=115.47 Aligned_cols=127 Identities=15% Similarity=0.128 Sum_probs=98.4
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++.+|||+|||+|.++..++..+ .+|+++|+++.+++.++.+.. .+...|..+.. .++.+++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~~-----------~~~~~d~~~~~-----~~~~~~~ 93 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKLD-----------HVVLGDIETMD-----MPYEEEQ 93 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTSS-----------EEEESCTTTCC-----CCSCTTC
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhCC-----------cEEEcchhhcC-----CCCCCCc
Confidence 467899999999998888888884 799999999999998876431 33334433211 1234568
Q ss_pred ccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee----------------------------cCCC
Q 009871 414 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF----------------------------RQVD 465 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~----------------------------r~~~ 465 (523)
||+|++++++++......+++.+.++| +|||.++++... +..+
T Consensus 94 fD~v~~~~~l~~~~~~~~~l~~~~~~L---------~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (230)
T 3cc8_A 94 FDCVIFGDVLEHLFDPWAVIEKVKPYI---------KQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFT 164 (230)
T ss_dssp EEEEEEESCGGGSSCHHHHHHHTGGGE---------EEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCC
T ss_pred cCEEEECChhhhcCCHHHHHHHHHHHc---------CCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEec
Confidence 999999999999888999999999999 679999987643 1124
Q ss_pred hhHHHHHHHHcCCEEEEEcCC
Q 009871 466 EPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 466 ~~~~~~~~~~~gf~~~~~~~~ 486 (523)
...+.+.++++||++..+...
T Consensus 165 ~~~~~~~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 165 FNEMLRMFLKAGYSISKVDRV 185 (230)
T ss_dssp HHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHcCCeEEEEEec
Confidence 567888899999999887654
No 180
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.30 E-value=1.9e-11 Score=119.96 Aligned_cols=110 Identities=9% Similarity=0.099 Sum_probs=86.7
Q ss_pred CCCeEEEECCCccHHHHHHHh--cCCCEEEEEcCChHHHHHHHHHHHhc-CCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 335 AGKKVLELGCGCGGICSMVAA--GSADLVVATDGDSIALDLLAQNVTAN-LKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~--~~~~~V~~~D~~~~~l~~~~~n~~~n-~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
++.+|||||||+|.++..++. ....+|+++|+|+.+++.+++++..+ +. ..++.+...|+.+..... ...+..
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~~v~~~~~d~~~~~~~~-~~~~~~ 111 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT---YKNVSFKISSSDDFKFLG-ADSVDK 111 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C---CTTEEEEECCTTCCGGGC-TTTTTS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC---CCceEEEEcCHHhCCccc-cccccC
Confidence 678999999999988888886 34679999999999999999999886 22 256788877776532110 001112
Q ss_pred CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEE
Q 009871 412 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILC 458 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~ 458 (523)
++||+|+++.++++. ....+++.+.++| +|||.+++.
T Consensus 112 ~~fD~V~~~~~l~~~-~~~~~l~~~~~~L---------kpgG~l~i~ 148 (299)
T 3g5t_A 112 QKIDMITAVECAHWF-DFEKFQRSAYANL---------RKDGTIAIW 148 (299)
T ss_dssp SCEEEEEEESCGGGS-CHHHHHHHHHHHE---------EEEEEEEEE
T ss_pred CCeeEEeHhhHHHHh-CHHHHHHHHHHhc---------CCCcEEEEE
Confidence 699999999999999 9999999999999 679998773
No 181
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.29 E-value=3.3e-11 Score=113.43 Aligned_cols=137 Identities=20% Similarity=0.168 Sum_probs=93.7
Q ss_pred hcCCCCCCCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhh
Q 009871 328 ARNPTIVAGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAI 406 (523)
Q Consensus 328 ~~~~~~~~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~ 406 (523)
.....+.++.+|||||||+|.++..++.. +..+|+++|+++.+++.+++|+..+ .++.+...|..+... .
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~------~~v~~~~~d~~~~~~---~ 137 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER------ENIIPILGDANKPQE---Y 137 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC------TTEEEEECCTTCGGG---G
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC------CCeEEEECCCCCccc---c
Confidence 33444557889999999999988888887 4469999999999999999987654 345665555443110 0
Q ss_pred hhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCCh--------hHHHHHHHHcCC
Q 009871 407 KEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDE--------PSMLSAATQCGF 478 (523)
Q Consensus 407 ~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~--------~~~~~~~~~~gf 478 (523)
.++. .+||+|+. ++ ..+.....+++.+.++| +|||.++++...+.... ..-+..+++.||
T Consensus 138 ~~~~-~~~D~v~~-~~-~~~~~~~~~l~~~~~~L---------kpgG~l~i~~~~~~~~~~~~~~~~~~~~l~~l~~~Gf 205 (230)
T 1fbn_A 138 ANIV-EKVDVIYE-DV-AQPNQAEILIKNAKWFL---------KKGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGF 205 (230)
T ss_dssp TTTS-CCEEEEEE-CC-CSTTHHHHHHHHHHHHE---------EEEEEEEEEEEGGGTCSSSCHHHHHHHHHHHHHHHTE
T ss_pred cccC-ccEEEEEE-ec-CChhHHHHHHHHHHHhC---------CCCcEEEEEEecCCCCCCCCHHHhhHHHHHHHHHCCC
Confidence 1222 68999993 22 22333477899999999 67999998743322111 122336788899
Q ss_pred EEEEEcC
Q 009871 479 RLVDKWP 485 (523)
Q Consensus 479 ~~~~~~~ 485 (523)
++.+...
T Consensus 206 ~~~~~~~ 212 (230)
T 1fbn_A 206 KIVDEVD 212 (230)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9887754
No 182
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.29 E-value=2.2e-11 Score=115.37 Aligned_cols=99 Identities=17% Similarity=0.213 Sum_probs=76.5
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||+|||+|.++..++.. .+|+++|+++.+++.+++++..++. ++.+...|..+. ++ +.+|
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~d~~~~-------~~-~~~f 97 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNR-----HVDFWVQDMREL-------EL-PEPV 97 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTC-----CCEEEECCGGGC-------CC-SSCE
T ss_pred CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCC-----ceEEEEcChhhc-------CC-CCCc
Confidence 5689999999999887777766 6899999999999999999887542 355555554332 12 3689
Q ss_pred cEEEEc-cccCCC---CChHHHHHHHHHHhhccCCCCCCCCCcEEEE
Q 009871 415 EVILGT-DVSYIP---EAILPLFATAKELTASSNKSLREDQQPAFIL 457 (523)
Q Consensus 415 D~Ii~~-d~~y~~---~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l 457 (523)
|+|++. +++.+. .....+++.+.++| +|||.+++
T Consensus 98 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L---------~pgG~l~~ 135 (243)
T 3d2l_A 98 DAITILCDSLNYLQTEADVKQTFDSAARLL---------TDGGKLLF 135 (243)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHHHE---------EEEEEEEE
T ss_pred CEEEEeCCchhhcCCHHHHHHHHHHHHHhc---------CCCeEEEE
Confidence 999987 477665 56678889999999 56888876
No 183
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.29 E-value=3.8e-12 Score=118.82 Aligned_cols=120 Identities=12% Similarity=0.171 Sum_probs=83.9
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
.++.+|||||||+|.++..+++.+|+..|+|||+|+.|++.|+++.... ..++.++++|+.+. ++..+++++||.|++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~-l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEV-LHKMIPDNSLRMVQL 111 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHH-HHHHSCTTCEEEEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHH-HHHHcCCCChheEEE
Confidence 4678999999999999999999999999999999999999999876433 35799999998752 111256889999998
Q ss_pred c---cccccce---------eeec-ceEEecCCeEEEeeC----HHHHHHHHHhC-CCcE
Q 009871 153 E---RLTGKDQ---------KISE-NFYVRGDGTRAFYFS----NDFLTSLFKEN-GFDV 194 (523)
Q Consensus 153 ~---~~~~~~~---------~~~~-~~~~~~~g~~~~~~~----~~~l~~ll~~~-Gf~~ 194 (523)
. .+.+... .+.. ...++++|.+.+... .+++.+.+... +|..
T Consensus 112 ~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~~ 171 (218)
T 3dxy_A 112 FFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKN 171 (218)
T ss_dssp ESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEE
T ss_pred eCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCccc
Confidence 1 1111100 0111 125888888776443 34455556543 4543
No 184
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.29 E-value=4.8e-12 Score=118.68 Aligned_cols=117 Identities=7% Similarity=0.048 Sum_probs=85.5
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
++.+|||||||+|.++..+++.+|..+|+|+|+++.+++.|+++...++ .++++.++|..+. ..++.+||+|++
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~----~~~~~~~D~Ivi 96 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAV----IEKKDAIDTIVI 96 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG----CCGGGCCCEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhc----cCccccccEEEE
Confidence 5689999999999999999999877789999999999999999875443 4699999999764 222336999886
Q ss_pred --------ccccccceeeecceEEecCCeEEEe--eCHHHHHHHHHhCCCcEEEEEeE
Q 009871 153 --------ERLTGKDQKISENFYVRGDGTRAFY--FSNDFLTSLFKENGFDVEELGLC 200 (523)
Q Consensus 153 --------~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~l~~ll~~~Gf~~~~~~~~ 200 (523)
.+++..... .+++.+.++.- ...+.+++.|.+.||.+++...+
T Consensus 97 agmGg~lI~~IL~~~~~-----~L~~~~~lIlq~~~~~~~lr~~L~~~Gf~i~~E~lv 149 (244)
T 3gnl_A 97 AGMGGTLIRTILEEGAA-----KLAGVTKLILQPNIAAWQLREWSEQNNWLITSEAIL 149 (244)
T ss_dssp EEECHHHHHHHHHHTGG-----GGTTCCEEEEEESSCHHHHHHHHHHHTEEEEEEEEE
T ss_pred eCCchHHHHHHHHHHHH-----HhCCCCEEEEEcCCChHHHHHHHHHCCCEEEEEEEE
Confidence 222222211 12223333221 25788999999999998766544
No 185
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.29 E-value=7.5e-12 Score=116.22 Aligned_cols=116 Identities=9% Similarity=0.122 Sum_probs=86.3
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCC-ceeEEE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPS-SIDIVT 151 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~-~fD~V~ 151 (523)
++.+|||||||+|.++..+++.+|..+|+|+|+++.+++.|+++...++ .++++.++|..+ +++++ .||+|+
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~-----~l~~~~~~D~Iv 89 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-----AFEETDQVSVIT 89 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-----GCCGGGCCCEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh-----hcccCcCCCEEE
Confidence 5689999999999999999999888899999999999999999876443 479999999864 23333 699888
Q ss_pred E--------ccccccceeeecceEEecCCeEEEe--eCHHHHHHHHHhCCCcEEEEEeE
Q 009871 152 M--------ERLTGKDQKISENFYVRGDGTRAFY--FSNDFLTSLFKENGFDVEELGLC 200 (523)
Q Consensus 152 ~--------~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~l~~ll~~~Gf~~~~~~~~ 200 (523)
. .+++..... .++++|.++.- ...+.+++.|.+.||.+++...+
T Consensus 90 iaG~Gg~~i~~Il~~~~~-----~L~~~~~lVlq~~~~~~~vr~~L~~~Gf~i~~e~lv 143 (225)
T 3kr9_A 90 IAGMGGRLIARILEEGLG-----KLANVERLILQPNNREDDLRIWLQDHGFQIVAESIL 143 (225)
T ss_dssp EEEECHHHHHHHHHHTGG-----GCTTCCEEEEEESSCHHHHHHHHHHTTEEEEEEEEE
T ss_pred EcCCChHHHHHHHHHHHH-----HhCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEEE
Confidence 6 122222211 23344444332 26788999999999998776544
No 186
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.29 E-value=1.2e-11 Score=118.44 Aligned_cols=134 Identities=12% Similarity=0.040 Sum_probs=102.5
Q ss_pred HhcCCCCCCCCeEEEECCCccHHHHHHHhc-C-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcch
Q 009871 327 LARNPTIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIE 404 (523)
Q Consensus 327 l~~~~~~~~~~~VLElG~G~G~l~~~~a~~-~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~ 404 (523)
+.......++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.|++|+..++.. .++.+...|+.+.
T Consensus 85 i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~---- 157 (255)
T 3mb5_A 85 IVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD---DRVTIKLKDIYEG---- 157 (255)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT---TTEEEECSCGGGC----
T ss_pred HHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC---CceEEEECchhhc----
Confidence 333334567889999999999998888887 5 569999999999999999999998764 4577776665432
Q ss_pred hhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcC--CEEEE
Q 009871 405 AIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCG--FRLVD 482 (523)
Q Consensus 405 ~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~g--f~~~~ 482 (523)
++..+||+|++. ......+++.+.++| +|+|.+++..... .....+.+.+++.| |...+
T Consensus 158 ----~~~~~~D~v~~~-----~~~~~~~l~~~~~~L---------~~gG~l~~~~~~~-~~~~~~~~~l~~~g~~f~~~~ 218 (255)
T 3mb5_A 158 ----IEEENVDHVILD-----LPQPERVVEHAAKAL---------KPGGFFVAYTPCS-NQVMRLHEKLREFKDYFMKPR 218 (255)
T ss_dssp ----CCCCSEEEEEEC-----SSCGGGGHHHHHHHE---------EEEEEEEEEESSH-HHHHHHHHHHHHTGGGBSCCE
T ss_pred ----cCCCCcCEEEEC-----CCCHHHHHHHHHHHc---------CCCCEEEEEECCH-HHHHHHHHHHHHcCCCccccE
Confidence 335689999984 345677899999999 6799988765432 23346778888999 98887
Q ss_pred EcCC
Q 009871 483 KWPS 486 (523)
Q Consensus 483 ~~~~ 486 (523)
+++.
T Consensus 219 ~~e~ 222 (255)
T 3mb5_A 219 TINV 222 (255)
T ss_dssp EECC
T ss_pred EEEE
Confidence 7763
No 187
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.29 E-value=1.9e-11 Score=119.04 Aligned_cols=126 Identities=17% Similarity=0.196 Sum_probs=94.6
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||+|||+|.++..++..+. +|+++|+|+.+++.+++++..++. ++.+...|..+.. . .++|
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~d~~~~~-------~-~~~f 185 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENL-----NISTALYDINAAN-------I-QENY 185 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-----CEEEEECCGGGCC-------C-CSCE
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCC-----ceEEEEecccccc-------c-cCCc
Confidence 678999999999998888888865 899999999999999999998764 4566655554321 1 5689
Q ss_pred cEEEEccccCCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec------------CCChhHHHHHHHHcCCEE
Q 009871 415 EVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFR------------QVDEPSMLSAATQCGFRL 480 (523)
Q Consensus 415 D~Ii~~d~~y~~--~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r------------~~~~~~~~~~~~~~gf~~ 480 (523)
|+|+++.++++. .....+++.+.++| +|||.+++..... ..+..++.+.+. +|++
T Consensus 186 D~i~~~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~ 254 (286)
T 3m70_A 186 DFIVSTVVFMFLNRERVPSIIKNMKEHT---------NVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYK--DWEF 254 (286)
T ss_dssp EEEEECSSGGGSCGGGHHHHHHHHHHTE---------EEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTT--TSEE
T ss_pred cEEEEccchhhCCHHHHHHHHHHHHHhc---------CCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhc--CCEE
Confidence 999999999864 55779999999999 6799977655432 122334444443 3887
Q ss_pred EEEcC
Q 009871 481 VDKWP 485 (523)
Q Consensus 481 ~~~~~ 485 (523)
....+
T Consensus 255 ~~~~~ 259 (286)
T 3m70_A 255 LEYNE 259 (286)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 76644
No 188
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.28 E-value=4.4e-12 Score=117.38 Aligned_cols=107 Identities=10% Similarity=0.011 Sum_probs=82.3
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++.+|||+|||+|.+...+++....+|+++|+|+.+++.+++++..++. ++.+...|..+. ++++++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~d~~~~-------~~~~~~ 89 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNF-----KLNISKGDIRKL-------PFKDES 89 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTC-----CCCEEECCTTSC-------CSCTTC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC-----ceEEEECchhhC-------CCCCCc
Confidence 36789999999999764444444445899999999999999999887552 344555554432 233568
Q ss_pred ccEEEEccccCCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 414 FEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 414 fD~Ii~~d~~y~~--~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
||+|++..++++. +....+++.+.++| +|||.+++....
T Consensus 90 fD~v~~~~~l~~~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~ 130 (209)
T 2p8j_A 90 MSFVYSYGTIFHMRKNDVKEAIDEIKRVL---------KPGGLACINFLT 130 (209)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHE---------EEEEEEEEEEEE
T ss_pred eeEEEEcChHHhCCHHHHHHHHHHHHHHc---------CCCcEEEEEEec
Confidence 9999999998886 67889999999999 679999887654
No 189
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.28 E-value=6.6e-12 Score=122.80 Aligned_cols=123 Identities=19% Similarity=0.220 Sum_probs=78.4
Q ss_pred CCCCeEEEECCCccccHH----HHHhhCCCCEE--EEEeCCHHHHHHHHhcccc--CCCcEEE--EEeeccCCc--cCCC
Q 009871 74 AGRKDVLEVGCGAGNTIF----PLIAAYPDVFV--YACDFSPRAVNLVMTHKDF--TETRVST--FVCDLISDD--LSRQ 141 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~----~l~~~~~~~~v--~gvD~S~~~l~~a~~~~~~--~~~~v~~--~~~d~~~~~--~~~~ 141 (523)
.++.+|||||||+|.++. .++.+++++.| +|+|+|+.|++.|+++... ...++++ .++++..+. +..+
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 456799999999997654 34445567754 9999999999999987542 2234554 444444220 0012
Q ss_pred CCCCceeEEEE-----------------ccccccceeeecceEEecCC----------------eEEEeeCHHHHHHHHH
Q 009871 142 ISPSSIDIVTM-----------------ERLTGKDQKISENFYVRGDG----------------TRAFYFSNDFLTSLFK 188 (523)
Q Consensus 142 ~~~~~fD~V~~-----------------~~~~~~~~~~~~~~~~~~~g----------------~~~~~~~~~~l~~ll~ 188 (523)
+++++||+|++ .+++++++.+.-... .+++ ....+++.+++.++|+
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV-SGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLD 209 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE-CTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHH
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEe-cCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHH
Confidence 56789999999 344455555432110 0110 0123468899999999
Q ss_pred hCCCcEEEE
Q 009871 189 ENGFDVEEL 197 (523)
Q Consensus 189 ~~Gf~~~~~ 197 (523)
++||.++..
T Consensus 210 ~aGf~~~~~ 218 (292)
T 2aot_A 210 NLGLKYECY 218 (292)
T ss_dssp HHTCCEEEE
T ss_pred HCCCceEEE
Confidence 999987643
No 190
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.28 E-value=4.7e-12 Score=122.55 Aligned_cols=127 Identities=15% Similarity=0.175 Sum_probs=89.3
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhh-CCCCEEEEEeCCHH------HHHHHHhccccCC--CcEEEEEee-ccCCccCC
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPR------AVNLVMTHKDFTE--TRVSTFVCD-LISDDLSR 140 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~gvD~S~~------~l~~a~~~~~~~~--~~v~~~~~d-~~~~~~~~ 140 (523)
+...++.+|||||||+|.++..++++ .|+.+|+|+|+|+. |++.|+++....+ .++++.++| .....+
T Consensus 39 ~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-- 116 (275)
T 3bkx_A 39 WQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLG-- 116 (275)
T ss_dssp HTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCG--
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccC--
Confidence 34467889999999999999999998 46689999999997 9999998764332 579999998 332222
Q ss_pred CCCCCceeEEEE-----------------ccccccceeeecceEEec--------------------------CCeEEEe
Q 009871 141 QISPSSIDIVTM-----------------ERLTGKDQKISENFYVRG--------------------------DGTRAFY 177 (523)
Q Consensus 141 ~~~~~~fD~V~~-----------------~~~~~~~~~~~~~~~~~~--------------------------~g~~~~~ 177 (523)
++++++||+|++ .++.++++.+.-.....+ .+....+
T Consensus 117 ~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (275)
T 3bkx_A 117 PIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTL 196 (275)
T ss_dssp GGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCC
T ss_pred CCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcccccccccccc
Confidence 567889999999 222232433321101000 1112235
Q ss_pred eCHHHHHHHHHhCCCcEEEEEe
Q 009871 178 FSNDFLTSLFKENGFDVEELGL 199 (523)
Q Consensus 178 ~~~~~l~~ll~~~Gf~~~~~~~ 199 (523)
++.+++.++++++||+++.+..
T Consensus 197 ~s~~~l~~~l~~aGf~~~~~~~ 218 (275)
T 3bkx_A 197 ITPDTLAQIAHDNTWTYTAGTI 218 (275)
T ss_dssp CCHHHHHHHHHHHTCEEEECCC
T ss_pred CCHHHHHHHHHHCCCeeEEEEE
Confidence 6899999999999999876643
No 191
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.28 E-value=7.1e-11 Score=120.54 Aligned_cols=135 Identities=20% Similarity=0.157 Sum_probs=98.2
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCC-CCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLK-PPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~-~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
++.+|||+|||+|.++..++..++.+|+++|+++.+++.+++|+..|++ . .++.+...|..+. ...+ .....+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~---~~v~~~~~D~~~~--~~~~-~~~~~~ 293 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDL---SKAEFVRDDVFKL--LRTY-RDRGEK 293 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCG---GGEEEEESCHHHH--HHHH-HHTTCC
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc---cceEEEECCHHHH--HHHH-HhcCCC
Confidence 6789999999999999999888878999999999999999999999987 4 2566665544321 1110 011458
Q ss_pred ccEEEEccccCCC---------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHH----HHHHHcCCEE
Q 009871 414 FEVILGTDVSYIP---------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSML----SAATQCGFRL 480 (523)
Q Consensus 414 fD~Ii~~d~~y~~---------~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~----~~~~~~gf~~ 480 (523)
||+|++....+.. .....++..+.++| +|+|.++++........+.+. +.+.+.|+.+
T Consensus 294 fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 364 (396)
T 3c0k_A 294 FDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLL---------NEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDV 364 (396)
T ss_dssp EEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTE---------EEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCE
T ss_pred CCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhc---------CCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeE
Confidence 9999986443322 45678888888899 679999998877666644333 3556778666
Q ss_pred EEEc
Q 009871 481 VDKW 484 (523)
Q Consensus 481 ~~~~ 484 (523)
..+.
T Consensus 365 ~~i~ 368 (396)
T 3c0k_A 365 QFIE 368 (396)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 192
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.28 E-value=1.8e-11 Score=114.89 Aligned_cols=119 Identities=18% Similarity=0.206 Sum_probs=92.8
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc-CC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN-NE 412 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~-~~ 412 (523)
.++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++| . .++.+...|+.+.. ++. ++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~--~-------~~~~~~~~d~~~~~------~~~~~~ 110 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQA-ARWAAYDFSPELLKLARAN--A-------PHADVYEWNGKGEL------PAGLGA 110 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHH--C-------TTSEEEECCSCSSC------CTTCCC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHh--C-------CCceEEEcchhhcc------CCcCCC
Confidence 367899999999998888888875 5899999999999999987 1 34677777764321 233 56
Q ss_pred CccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEcC
Q 009871 413 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
+||+|+++ .....+++.+.++| +|||.++. .........+.+.+.+.||....+..
T Consensus 111 ~fD~v~~~------~~~~~~l~~~~~~L---------kpgG~l~~--~~~~~~~~~~~~~l~~~Gf~~~~~~~ 166 (226)
T 3m33_A 111 PFGLIVSR------RGPTSVILRLPELA---------APDAHFLY--VGPRLNVPEVPERLAAVGWDIVAEDH 166 (226)
T ss_dssp CEEEEEEE------SCCSGGGGGHHHHE---------EEEEEEEE--EESSSCCTHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEEeC------CCHHHHHHHHHHHc---------CCCcEEEE--eCCcCCHHHHHHHHHHCCCeEEEEEe
Confidence 89999998 46778899999999 67999883 33344556788999999999877643
No 193
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.28 E-value=1.3e-11 Score=119.60 Aligned_cols=133 Identities=10% Similarity=0.122 Sum_probs=99.5
Q ss_pred HHhcCCCCCCCCeEEEECCCccHHHHHHHhc-C-CCEEEEEcCChHHHHHHHHHHHhc-CCCCCCCceEEEeeecCCCCc
Q 009871 326 VLARNPTIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTAN-LKPPFLAKLITKRLEWGNRDH 402 (523)
Q Consensus 326 ~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~-~-~~~V~~~D~~~~~l~~~~~n~~~n-~~~~~~~~v~~~~ldw~~~~~ 402 (523)
++.......++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+++|+..+ +. .++.+...|+.+.
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~----~~v~~~~~d~~~~-- 174 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI----GNVRTSRSDIADF-- 174 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC----TTEEEECSCTTTC--
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC----CcEEEEECchhcc--
Confidence 4444445567889999999999988888876 3 469999999999999999999887 63 4577766665542
Q ss_pred chhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEE
Q 009871 403 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVD 482 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~ 482 (523)
+++++||+|++ +......+++.+.++| +|||.+++...... ....+.+.+++.||...+
T Consensus 175 ------~~~~~fD~Vi~-----~~~~~~~~l~~~~~~L---------kpgG~l~i~~~~~~-~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 175 ------ISDQMYDAVIA-----DIPDPWNHVQKIASMM---------KPGSVATFYLPNFD-QSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp ------CCSCCEEEEEE-----CCSCGGGSHHHHHHTE---------EEEEEEEEEESSHH-HHHHHHHHSGGGTEEEEE
T ss_pred ------CcCCCccEEEE-----cCcCHHHHHHHHHHHc---------CCCCEEEEEeCCHH-HHHHHHHHHHHCCCeEEE
Confidence 23468999998 3345678999999999 67999988775421 234567777889999888
Q ss_pred EcC
Q 009871 483 KWP 485 (523)
Q Consensus 483 ~~~ 485 (523)
++.
T Consensus 234 ~~~ 236 (275)
T 1yb2_A 234 TVE 236 (275)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 194
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=3.5e-11 Score=114.31 Aligned_cols=124 Identities=15% Similarity=0.056 Sum_probs=91.3
Q ss_pred cchhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEee
Q 009871 316 LWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 395 (523)
Q Consensus 316 ~W~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~l 395 (523)
.|..+......+..+ ..++.+|||||||+|.++..++..+. +|+++|+|+.+++.+++++.. .++.+...
T Consensus 39 ~~~~~~~~~~~~~~~--~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~-------~~~~~~~~ 108 (245)
T 3ggd_A 39 VERAVVVDLPRFELL--FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTA-------ANISYRLL 108 (245)
T ss_dssp GGGTHHHHHHHHTTT--SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCC-------TTEEEEEC
T ss_pred hHHHHHHHHHHHhhc--cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcc-------cCceEEEC
Confidence 344444444444433 45778999999999999988888876 799999999999999987621 35677766
Q ss_pred ecCCCCcchhhhhhc-CCCccEEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 396 EWGNRDHIEAIKEEN-NEGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 396 dw~~~~~~~~~~~~~-~~~fD~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
|..+..... .+. ...||+|+++.++++.. ....+++.+.++| +|||.++++...
T Consensus 109 d~~~~~~~~---~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~l~i~~~~ 165 (245)
T 3ggd_A 109 DGLVPEQAA---QIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILL---------GKQGAMYLIELG 165 (245)
T ss_dssp CTTCHHHHH---HHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHH---------TTTCEEEEEEEC
T ss_pred ccccccccc---ccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHc---------CCCCEEEEEeCC
Confidence 665432111 111 12599999999999877 7899999999999 779998877653
No 195
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.28 E-value=1.4e-11 Score=118.31 Aligned_cols=128 Identities=10% Similarity=0.141 Sum_probs=93.3
Q ss_pred hcCC-CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCce
Q 009871 71 FSGA-GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 71 ~~~~-~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
+... ++.+|||+|||+|..+..++++++. +|+|+|+++.|++.|+++....+ .+++++++|+.+. +..+++++|
T Consensus 44 ~~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~--~~~~~~~~f 120 (259)
T 3lpm_A 44 SYLPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKI--TDLIPKERA 120 (259)
T ss_dssp CCCCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGG--GGTSCTTCE
T ss_pred hcCCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHh--hhhhccCCc
Confidence 3445 6889999999999999999998654 89999999999999999875433 4699999999865 222457899
Q ss_pred eEEEE-cccccc---ce-------------------ee-ec-ceEEecCCeEEEee---CHHHHHHHHHhCCCcEEEEEe
Q 009871 148 DIVTM-ERLTGK---DQ-------------------KI-SE-NFYVRGDGTRAFYF---SNDFLTSLFKENGFDVEELGL 199 (523)
Q Consensus 148 D~V~~-~~~~~~---~~-------------------~~-~~-~~~~~~~g~~~~~~---~~~~l~~ll~~~Gf~~~~~~~ 199 (523)
|+|++ ..+... +. .+ .. ...++++|.+++.+ ...++...+.+.||....+..
T Consensus 121 D~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 200 (259)
T 3lpm_A 121 DIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQF 200 (259)
T ss_dssp EEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEEEEEE
T ss_pred cEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceEEEEE
Confidence 99999 111111 00 00 00 12578889887754 567788889999999877655
Q ss_pred Ee
Q 009871 200 CC 201 (523)
Q Consensus 200 ~~ 201 (523)
+.
T Consensus 201 v~ 202 (259)
T 3lpm_A 201 VH 202 (259)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 196
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.27 E-value=2.9e-11 Score=116.22 Aligned_cols=127 Identities=12% Similarity=0.121 Sum_probs=93.9
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.+|.+|||+|||+|.+++.+|+.++.+|+++|+||.+++.+++|++.|++. +++.+...|-.+. .....
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~---~~v~~~~~D~~~~--------~~~~~ 192 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVE---DRMSAYNMDNRDF--------PGENI 192 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCT---TTEEEECSCTTTC--------CCCSC
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEeCcHHHh--------ccccC
Confidence 368899999999999999999988889999999999999999999999986 5677766554432 12458
Q ss_pred ccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC---C--ChhHHHHHHHHcCCEEEEEc
Q 009871 414 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ---V--DEPSMLSAATQCGFRLVDKW 484 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~---~--~~~~~~~~~~~~gf~~~~~~ 484 (523)
||.|+.+...+ ...++..+.++| ++||.+.+-..... . ..+.+.+.+++.|+++..+.
T Consensus 193 ~D~Vi~~~p~~----~~~~l~~a~~~l---------k~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~~ 255 (278)
T 3k6r_A 193 ADRILMGYVVR----THEFIPKALSIA---------KDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLN 255 (278)
T ss_dssp EEEEEECCCSS----GGGGHHHHHHHE---------EEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEECCCCc----HHHHHHHHHHHc---------CCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEEEE
Confidence 99999875433 345667777888 56887754322211 1 12345566788999886553
No 197
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.27 E-value=3.9e-12 Score=124.36 Aligned_cols=103 Identities=18% Similarity=0.272 Sum_probs=74.9
Q ss_pred HhhHHHHHHHHhcccccccchhhhHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcc
Q 009871 40 EAKKYWDLFYKRHQDRFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHK 119 (523)
Q Consensus 40 ~~~~~Wd~~y~~~~~~f~~~~~~l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~ 119 (523)
...++|+.++.....++..-+.++ ...+...++.+|||||||+|..+..+++. +.+|+|+|+|+.|++.|+++.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l----~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~ 99 (293)
T 3thr_A 26 EAARVWQLYIGDTRSRTAEYKAWL----LGLLRQHGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKER 99 (293)
T ss_dssp HHHHHHHHHHTCCSCBCHHHHHHH----HHHHHHTTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCcchHHHHHHHH----HHHhcccCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhh
Confidence 445789888855433332222233 33333356789999999999999999998 458999999999999998864
Q ss_pred cc-----CCCcEEEEEeeccCCccCCC---CCCCceeEEEE
Q 009871 120 DF-----TETRVSTFVCDLISDDLSRQ---ISPSSIDIVTM 152 (523)
Q Consensus 120 ~~-----~~~~v~~~~~d~~~~~~~~~---~~~~~fD~V~~ 152 (523)
.. ...++.+.++|+..+ + +++++||+|+|
T Consensus 100 ~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~~~fD~V~~ 136 (293)
T 3thr_A 100 WNRRKEPAFDKWVIEEANWLTL----DKDVPAGDGFDAVIC 136 (293)
T ss_dssp HHTTTSHHHHTCEEEECCGGGH----HHHSCCTTCEEEEEE
T ss_pred hhcccccccceeeEeecChhhC----ccccccCCCeEEEEE
Confidence 21 124678899998865 4 56789999997
No 198
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.27 E-value=3.2e-12 Score=114.27 Aligned_cols=113 Identities=21% Similarity=0.215 Sum_probs=81.3
Q ss_pred cCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 72 SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 72 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
...++.+|||+|||+|..+..+++.+ .+|+|+|+|+.|++.|+++ ..++++.++| . ++++++||+|+
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----~~~v~~~~~d---~----~~~~~~~D~v~ 80 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK----FDSVITLSDP---K----EIPDNSVDFIL 80 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH----CTTSEEESSG---G----GSCTTCEEEEE
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh----CCCcEEEeCC---C----CCCCCceEEEE
Confidence 34577899999999999999999886 3799999999999999987 2578899888 3 56788999999
Q ss_pred Eccccccc---e-eeec-ceEEecCCeEEE----------------eeCHHHHHHHHHhCCCcEEEEEe
Q 009871 152 MERLTGKD---Q-KISE-NFYVRGDGTRAF----------------YFSNDFLTSLFKENGFDVEELGL 199 (523)
Q Consensus 152 ~~~~~~~~---~-~~~~-~~~~~~~g~~~~----------------~~~~~~l~~ll~~~Gf~~~~~~~ 199 (523)
+...+... . .+.. ...++++|.+++ .++.+++.++++ ||++++...
T Consensus 81 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~ 147 (170)
T 3i9f_A 81 FANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFN 147 (170)
T ss_dssp EESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEEC
T ss_pred EccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccC
Confidence 91110000 0 0000 013445554433 358899999998 999877643
No 199
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.27 E-value=7.6e-12 Score=116.47 Aligned_cols=75 Identities=20% Similarity=0.274 Sum_probs=64.1
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeE
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDI 149 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 149 (523)
.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.|+++.... .+++++++|+.+. + ++++||+
T Consensus 46 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~----~-~~~~fD~ 117 (216)
T 3ofk_A 46 SLSSGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRW-SHISWAATDILQF----S-TAELFDL 117 (216)
T ss_dssp HTTTSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTC-SSEEEEECCTTTC----C-CSCCEEE
T ss_pred HcccCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccC-CCeEEEEcchhhC----C-CCCCccE
Confidence 4444667899999999999999999884 57999999999999999986543 4799999999876 3 5789999
Q ss_pred EEE
Q 009871 150 VTM 152 (523)
Q Consensus 150 V~~ 152 (523)
|++
T Consensus 118 v~~ 120 (216)
T 3ofk_A 118 IVV 120 (216)
T ss_dssp EEE
T ss_pred EEE
Confidence 999
No 200
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.27 E-value=3.4e-12 Score=125.32 Aligned_cols=75 Identities=21% Similarity=0.297 Sum_probs=65.6
Q ss_pred CCCCeEEEECCCccccHHHHHhhC-CCCEEEEEeCCHHHHHHHHhccccC---CCcEEEEEeeccCCccCCCCCC-----
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFT---ETRVSTFVCDLISDDLSRQISP----- 144 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~gvD~S~~~l~~a~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~----- 144 (523)
.++.+|||||||+|..+..+++.+ ++.+|+|+|+|+.|++.|+++.... ..+++++++|+.++ ++++
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~~~~ 110 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDF----KFLGADSVD 110 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCC----GGGCTTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhC----Ccccccccc
Confidence 478899999999999999999875 7889999999999999999976543 57899999999987 4444
Q ss_pred -CceeEEEE
Q 009871 145 -SSIDIVTM 152 (523)
Q Consensus 145 -~~fD~V~~ 152 (523)
++||+|++
T Consensus 111 ~~~fD~V~~ 119 (299)
T 3g5t_A 111 KQKIDMITA 119 (299)
T ss_dssp SSCEEEEEE
T ss_pred CCCeeEEeH
Confidence 89999999
No 201
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.27 E-value=1.4e-11 Score=120.84 Aligned_cols=78 Identities=13% Similarity=0.148 Sum_probs=58.6
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCC-------cEEEEEeeccCC----ccCCCC
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTET-------RVSTFVCDLISD----DLSRQI 142 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~-------~v~~~~~d~~~~----~~~~~~ 142 (523)
+++.+|||||||+|..+..+++.. ..+|+|+|+|+.||+.|+++...... +++|.+.|+... +++.++
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 357899999999999877766653 46899999999999999997643222 367888888432 122245
Q ss_pred CCCceeEEEE
Q 009871 143 SPSSIDIVTM 152 (523)
Q Consensus 143 ~~~~fD~V~~ 152 (523)
++++||+|+|
T Consensus 126 ~~~~FD~V~~ 135 (302)
T 2vdw_A 126 YFGKFNIIDW 135 (302)
T ss_dssp CSSCEEEEEE
T ss_pred cCCCeeEEEE
Confidence 6789999998
No 202
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.27 E-value=3.2e-11 Score=115.00 Aligned_cols=113 Identities=14% Similarity=0.031 Sum_probs=82.7
Q ss_pred HHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCc-c
Q 009871 325 AVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH-I 403 (523)
Q Consensus 325 ~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~-~ 403 (523)
+.+.......++.+|||||||+|.++..++.++ .+|+++|+|+.|++.+++|+..+ . ...+|.+... .
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g-~~V~gvD~S~~ml~~Ar~~~~~~-------~---v~~~~~~~~~~~ 103 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRFLIEKALERG-ASVTVFDFSQRMCDDLAEALADR-------C---VTIDLLDITAEI 103 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTSSS-------C---CEEEECCTTSCC
T ss_pred HHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHhc-------c---ceeeeeeccccc
Confidence 444444455688999999999999888888876 48999999999999999987654 1 2234443321 0
Q ss_pred hhhhhhcCCCccEEEEccccCC--CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 404 EAIKEENNEGFEVILGTDVSYI--PEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 404 ~~~~~~~~~~fD~Ii~~d~~y~--~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
. ....++||+|+++.++++ .+....+++.+.++| |||.++++...
T Consensus 104 ~---~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL----------PGG~l~lS~~~ 150 (261)
T 3iv6_A 104 P---KELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV----------GSGTVRASVKL 150 (261)
T ss_dssp C---GGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH----------TTSEEEEEEEB
T ss_pred c---cccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC----------cCcEEEEEecc
Confidence 0 011468999999988865 345677888888888 58999988765
No 203
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.27 E-value=1e-10 Score=107.97 Aligned_cols=126 Identities=17% Similarity=0.142 Sum_probs=89.9
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
..++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++|+..++. ++.+...|+.+ + +.
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~d~~~---------~-~~ 111 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG-----KFKVFIGDVSE---------F-NS 111 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT-----SEEEEESCGGG---------C-CC
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-----CEEEEECchHH---------c-CC
Confidence 347889999999999998888888777899999999999999999988764 35555544432 1 24
Q ss_pred CccEEEEccccCCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEcC
Q 009871 413 GFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~--~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
+||+|+++...+.. .....+++.+.+++ ++.++++... ......+.+.+.+.||++..+..
T Consensus 112 ~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l-----------~~~~~~~~~~-~~~~~~~~~~l~~~g~~~~~~~~ 174 (207)
T 1wy7_A 112 RVDIVIMNPPFGSQRKHADRPFLLKAFEIS-----------DVVYSIHLAK-PEVRRFIEKFSWEHGFVVTHRLT 174 (207)
T ss_dssp CCSEEEECCCCSSSSTTTTHHHHHHHHHHC-----------SEEEEEEECC-HHHHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCEEEEcCCCccccCCchHHHHHHHHHhc-----------CcEEEEEeCC-cCCHHHHHHHHHHCCCeEEEEEE
Confidence 89999997665443 34456677777666 5555554211 22234456777889999877644
No 204
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.27 E-value=1.2e-12 Score=121.41 Aligned_cols=144 Identities=16% Similarity=0.057 Sum_probs=80.4
Q ss_pred HHHHHHHhcC-CCCCCCCeEEEECCCccHHHHHHHhcCC-CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecC
Q 009871 321 HLMAAVLARN-PTIVAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWG 398 (523)
Q Consensus 321 ~~la~~l~~~-~~~~~~~~VLElG~G~G~l~~~~a~~~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~ 398 (523)
..+.+++... ....++.+|||+|||+|.++..++..++ .+|+++|+++.+++.+++|+..++. ++.+...|+.
T Consensus 15 ~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~d~~ 89 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-----VVDWAAADGI 89 (215)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHHHH
T ss_pred HHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-----ceEEEEcchH
Confidence 3344444432 2224778999999999998888888864 4899999999999999999887654 2333333332
Q ss_pred CCCcchhhhh--hcCCCccEEEEccccCCCCCh--------------------------HHHHHHHHHHhhccCCCCCCC
Q 009871 399 NRDHIEAIKE--ENNEGFEVILGTDVSYIPEAI--------------------------LPLFATAKELTASSNKSLRED 450 (523)
Q Consensus 399 ~~~~~~~~~~--~~~~~fD~Ii~~d~~y~~~~~--------------------------~~l~~~l~~ll~~~~~~~~~~ 450 (523)
+ .+.. ...++||+|+++...+..... ..+++.+.++| +
T Consensus 90 ~-----~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L---------k 155 (215)
T 4dzr_A 90 E-----WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVL---------A 155 (215)
T ss_dssp H-----HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGB---------C
T ss_pred h-----hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHh---------c
Confidence 2 1111 123799999997665443322 56677777788 6
Q ss_pred CCcE-EEEEEeecCCChhHHHHHHH--HcCCEEEEEcC
Q 009871 451 QQPA-FILCHIFRQVDEPSMLSAAT--QCGFRLVDKWP 485 (523)
Q Consensus 451 ~~g~-~~l~~~~r~~~~~~~~~~~~--~~gf~~~~~~~ 485 (523)
|||. +++... ......+.+.++ +.||....++.
T Consensus 156 pgG~l~~~~~~--~~~~~~~~~~l~~~~~gf~~~~~~~ 191 (215)
T 4dzr_A 156 RGRAGVFLEVG--HNQADEVARLFAPWRERGFRVRKVK 191 (215)
T ss_dssp SSSEEEEEECT--TSCHHHHHHHTGGGGGGTEECCEEE
T ss_pred CCCeEEEEEEC--CccHHHHHHHHHHhhcCCceEEEEE
Confidence 7999 555433 334556778888 89998766655
No 205
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.26 E-value=1.2e-11 Score=121.48 Aligned_cols=75 Identities=19% Similarity=0.176 Sum_probs=63.3
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCce
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
.+...++.+|||||||+|.++..+++.++ ++|+|+|+|+.|++.|+++.... ..++++.++|+.++ +++|
T Consensus 67 ~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-------~~~f 138 (302)
T 3hem_A 67 KLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-------DEPV 138 (302)
T ss_dssp TTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-------CCCC
T ss_pred HcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-------CCCc
Confidence 34446788999999999999999999864 78999999999999999976433 24799999999743 6789
Q ss_pred eEEEE
Q 009871 148 DIVTM 152 (523)
Q Consensus 148 D~V~~ 152 (523)
|+|++
T Consensus 139 D~v~~ 143 (302)
T 3hem_A 139 DRIVS 143 (302)
T ss_dssp SEEEE
T ss_pred cEEEE
Confidence 99999
No 206
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.26 E-value=2.3e-11 Score=118.59 Aligned_cols=75 Identities=20% Similarity=0.247 Sum_probs=62.0
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCce
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
.+...++.+|||||||+|..+..+++.. +++|+|+|+|+.|++.|+++.... ..++++.++|+.++ + ++|
T Consensus 59 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~---~~f 130 (287)
T 1kpg_A 59 KLGLQPGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF----D---EPV 130 (287)
T ss_dssp TTTCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC----C---CCC
T ss_pred HcCCCCcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC----C---CCe
Confidence 3444678899999999999999999664 458999999999999999876432 25799999999754 2 789
Q ss_pred eEEEE
Q 009871 148 DIVTM 152 (523)
Q Consensus 148 D~V~~ 152 (523)
|+|++
T Consensus 131 D~v~~ 135 (287)
T 1kpg_A 131 DRIVS 135 (287)
T ss_dssp SEEEE
T ss_pred eEEEE
Confidence 99999
No 207
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.26 E-value=2.8e-11 Score=118.64 Aligned_cols=137 Identities=15% Similarity=0.070 Sum_probs=89.3
Q ss_pred cchhHHHHHHHHhcCC-CCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCC--ceEE
Q 009871 316 LWESAHLMAAVLARNP-TIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLA--KLIT 392 (523)
Q Consensus 316 ~W~~a~~la~~l~~~~-~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~--~v~~ 392 (523)
.|-.+.++..++.... ...++.+|||||||+|.....+++.+..+|+|+|+|+.||+.|+++....+...... .+.+
T Consensus 28 n~vks~li~~~~~~~~~~~~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f 107 (302)
T 2vdw_A 28 NYVKTLLISMYCSKTFLDDSNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDY 107 (302)
T ss_dssp HHHHHHHHHHHTCTTTSSCCSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEE
T ss_pred HHHHHHHHHHHHhhhhhccCCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccch
Confidence 4655656665553311 112578999999999965655666666789999999999999998876543210000 1334
Q ss_pred EeeecCCCCcchhhh-hhcCCCccEEEEccccCC---CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 393 KRLEWGNRDHIEAIK-EENNEGFEVILGTDVSYI---PEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 393 ~~ldw~~~~~~~~~~-~~~~~~fD~Ii~~d~~y~---~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
...+.........+. .+++++||+|++..++++ .+....+++.+.++| +|||.++++...
T Consensus 108 ~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~L---------kpGG~~i~~~~~ 171 (302)
T 2vdw_A 108 IQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELT---------ASGGKVLITTMD 171 (302)
T ss_dssp EECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHE---------EEEEEEEEEEEC
T ss_pred hhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHc---------CCCCEEEEEeCC
Confidence 333332211101121 234579999999887743 356789999999999 779999887653
No 208
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.26 E-value=6.8e-11 Score=109.92 Aligned_cols=132 Identities=11% Similarity=-0.010 Sum_probs=94.6
Q ss_pred CCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++|+..++. .++.+...|..+ +.. .+++++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~----~nv~~~~~d~~~---l~~--~~~~~~ 108 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA----QNVKLLNIDADT---LTD--VFEPGE 108 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC----SSEEEECCCGGG---HHH--HCCTTS
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC----CCEEEEeCCHHH---HHh--hcCcCC
Confidence 56799999999999888888874 45899999999999999999998765 346666555432 111 144678
Q ss_pred ccEEEEccccCCCC--------ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEcC
Q 009871 414 FEVILGTDVSYIPE--------AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 414 fD~Ii~~d~~y~~~--------~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
||.|+..-..-+.. ....+++.+.++| +|||.+++...... ......+.+.+.||....+..
T Consensus 109 ~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~L---------kpgG~l~~~td~~~-~~~~~~~~~~~~g~~~~~~~~ 178 (213)
T 2fca_A 109 VKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVM---------GKGGSIHFKTDNRG-LFEYSLKSFSEYGLLLTYVSL 178 (213)
T ss_dssp CCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHH---------TTSCEEEEEESCHH-HHHHHHHHHHHHTCEEEEEES
T ss_pred cCEEEEECCCCCcCccccccccCcHHHHHHHHHHc---------CCCCEEEEEeCCHH-HHHHHHHHHHHCCCccccccc
Confidence 99998752211111 1478999999999 78999998763321 112456777788998876643
No 209
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.26 E-value=1e-10 Score=118.20 Aligned_cols=132 Identities=10% Similarity=0.058 Sum_probs=105.2
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhcCC-CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 410 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~ 410 (523)
...++.+|||+|||+|.++..+++..+ .+++++|+ +.+++.+++++...++. .++.+...|..+. ++
T Consensus 199 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~---~~v~~~~~d~~~~--------~p 266 (369)
T 3gwz_A 199 DFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLA---DRCEILPGDFFET--------IP 266 (369)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT---TTEEEEECCTTTC--------CC
T ss_pred CCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcC---CceEEeccCCCCC--------CC
Confidence 344678999999999998888888753 48999999 99999999999887664 5788888777622 22
Q ss_pred CCCccEEEEccccCCCCChH--HHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC----------------------CCh
Q 009871 411 NEGFEVILGTDVSYIPEAIL--PLFATAKELTASSNKSLREDQQPAFILCHIFRQ----------------------VDE 466 (523)
Q Consensus 411 ~~~fD~Ii~~d~~y~~~~~~--~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~----------------------~~~ 466 (523)
..||+|++..++++..... .+++.+.++| +|||.+++...... .+.
T Consensus 267 -~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L---------~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~ 336 (369)
T 3gwz_A 267 -DGADVYLIKHVLHDWDDDDVVRILRRIATAM---------KPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSE 336 (369)
T ss_dssp -SSCSEEEEESCGGGSCHHHHHHHHHHHHTTC---------CTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCH
T ss_pred -CCceEEEhhhhhccCCHHHHHHHHHHHHHHc---------CCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCH
Confidence 2799999999998766544 7999999999 77999998765432 234
Q ss_pred hHHHHHHHHcCCEEEEEcC
Q 009871 467 PSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 467 ~~~~~~~~~~gf~~~~~~~ 485 (523)
.++.+.++++||++.+++.
T Consensus 337 ~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 337 SEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp HHHHHHHHTTTEEEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEEE
Confidence 5677888999999999976
No 210
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.26 E-value=5.7e-11 Score=110.05 Aligned_cols=108 Identities=16% Similarity=0.109 Sum_probs=82.7
Q ss_pred HHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcch
Q 009871 325 AVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIE 404 (523)
Q Consensus 325 ~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~ 404 (523)
+++..... ++.+|||+|||+|.++..+ +..+|+++|+++.+++.++++. ..+.+...|..+.
T Consensus 28 ~~l~~~~~--~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~---- 89 (211)
T 2gs9_A 28 RALKGLLP--PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA---------PEATWVRAWGEAL---- 89 (211)
T ss_dssp HHHHTTCC--CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC---------TTSEEECCCTTSC----
T ss_pred HHHHHhcC--CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcccccC----
Confidence 44444432 7889999999999766555 4448999999999999998875 1344544444332
Q ss_pred hhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 009871 405 AIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 462 (523)
Q Consensus 405 ~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r 462 (523)
++++++||+|++..++++......+++.+.++| +|||.++++...+
T Consensus 90 ---~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L---------~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 90 ---PFPGESFDVVLLFTTLEFVEDVERVLLEARRVL---------RPGGALVVGVLEA 135 (211)
T ss_dssp ---CSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHE---------EEEEEEEEEEECT
T ss_pred ---CCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHc---------CCCCEEEEEecCC
Confidence 234568999999999999989999999999999 6799999887653
No 211
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.25 E-value=3.7e-11 Score=112.19 Aligned_cols=118 Identities=11% Similarity=0.147 Sum_probs=92.9
Q ss_pred CCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCcc
Q 009871 336 GKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFE 415 (523)
Q Consensus 336 ~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD 415 (523)
+.+|||+|||+|.++..++.. +++|+++.+++.++++ .+.+...+..+. ++..++||
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~-------~~~~~~fD 104 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR-----------GVFVLKGTAENL-------PLKDESFD 104 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT-----------TCEEEECBTTBC-------CSCTTCEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc-----------CCEEEEcccccC-------CCCCCCee
Confidence 789999999999877766554 9999999999999876 234444444322 23356899
Q ss_pred EEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC----------------------CChhHHHHHH
Q 009871 416 VILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ----------------------VDEPSMLSAA 473 (523)
Q Consensus 416 ~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~----------------------~~~~~~~~~~ 473 (523)
+|++..++++......+++.+.++| +|||.++++...+. .+...+.+.+
T Consensus 105 ~v~~~~~l~~~~~~~~~l~~~~~~L---------~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 175 (219)
T 1vlm_A 105 FALMVTTICFVDDPERALKEAYRIL---------KKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLM 175 (219)
T ss_dssp EEEEESCGGGSSCHHHHHHHHHHHE---------EEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHH
T ss_pred EEEEcchHhhccCHHHHHHHHHHHc---------CCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHH
Confidence 9999999999889999999999999 67999998765421 2456788889
Q ss_pred HHcCCEEEEEcC
Q 009871 474 TQCGFRLVDKWP 485 (523)
Q Consensus 474 ~~~gf~~~~~~~ 485 (523)
+++||++.++..
T Consensus 176 ~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 176 RKAGFEEFKVVQ 187 (219)
T ss_dssp HHTTCEEEEEEE
T ss_pred HHCCCeEEEEec
Confidence 999999988754
No 212
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.25 E-value=3.6e-11 Score=116.55 Aligned_cols=130 Identities=14% Similarity=0.178 Sum_probs=99.5
Q ss_pred CCCCCCCeEEEECCCccHHHHHHHhc-C-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhh
Q 009871 331 PTIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKE 408 (523)
Q Consensus 331 ~~~~~~~~VLElG~G~G~l~~~~a~~-~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~ 408 (523)
....++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+++|+..++.. .++.+...|+.+.
T Consensus 108 ~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-------- 176 (277)
T 1o54_A 108 LDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI---ERVTIKVRDISEG-------- 176 (277)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG---GGEEEECCCGGGC--------
T ss_pred hCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC---CCEEEEECCHHHc--------
Confidence 34567889999999999988888887 5 469999999999999999999987653 3566665555332
Q ss_pred hcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEcCC
Q 009871 409 ENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 409 ~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~~~ 486 (523)
++.++||+|++. ......+++.+.++| +|+|.+++..... .....+.+.+++.||...+++..
T Consensus 177 ~~~~~~D~V~~~-----~~~~~~~l~~~~~~L---------~pgG~l~~~~~~~-~~~~~~~~~l~~~gf~~~~~~~~ 239 (277)
T 1o54_A 177 FDEKDVDALFLD-----VPDPWNYIDKCWEAL---------KGGGRFATVCPTT-NQVQETLKKLQELPFIRIEVWES 239 (277)
T ss_dssp CSCCSEEEEEEC-----CSCGGGTHHHHHHHE---------EEEEEEEEEESSH-HHHHHHHHHHHHSSEEEEEEECC
T ss_pred ccCCccCEEEEC-----CcCHHHHHHHHHHHc---------CCCCEEEEEeCCH-HHHHHHHHHHHHCCCceeEEEEE
Confidence 234589999983 345668899999999 6799988876532 12346777888899998888763
No 213
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.25 E-value=1.2e-12 Score=121.64 Aligned_cols=119 Identities=16% Similarity=0.123 Sum_probs=72.7
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCC-----Ccee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISP-----SSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~-----~~fD 148 (523)
.++.+|||+|||+|..+..+++.+++.+|+|+|+|+.|++.|+++....+.+++++++|+.+ ++++ ++||
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-----WLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-----HHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-----hhhhhhhccCccc
Confidence 57789999999999999999999888899999999999999999875443378888888875 2333 8999
Q ss_pred EEEE-cccc---------ccc-------------------eee-ec-ceEEecCCe-EEEe---eCHHHHHHHHH--hCC
Q 009871 149 IVTM-ERLT---------GKD-------------------QKI-SE-NFYVRGDGT-RAFY---FSNDFLTSLFK--ENG 191 (523)
Q Consensus 149 ~V~~-~~~~---------~~~-------------------~~~-~~-~~~~~~~g~-~~~~---~~~~~l~~ll~--~~G 191 (523)
+|++ ..+. ... ..+ .. ...++++|. .++. ...+++.+++. +.|
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~g 183 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRER 183 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcC
Confidence 9999 1110 000 000 00 125788998 5442 36788999999 999
Q ss_pred CcEEEE
Q 009871 192 FDVEEL 197 (523)
Q Consensus 192 f~~~~~ 197 (523)
|..+++
T Consensus 184 f~~~~~ 189 (215)
T 4dzr_A 184 GFRVRK 189 (215)
T ss_dssp TEECCE
T ss_pred CceEEE
Confidence 976543
No 214
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.25 E-value=9.1e-12 Score=117.61 Aligned_cols=117 Identities=13% Similarity=0.277 Sum_probs=80.3
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccc-------cCCCcEEEEEeeccCCccCCCCCCCc
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKD-------FTETRVSTFVCDLISDDLSRQISPSS 146 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~-------~~~~~v~~~~~d~~~~~~~~~~~~~~ 146 (523)
.++.+|||||||+|.++..|++.+|+..|+|||+|+.|++.|+++.. ....+++++++|+.+. ++..+++++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~-l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKH-LPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTC-HHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHh-hhhhCCCcC
Confidence 45678999999999999999999998999999999999999987542 2236899999999751 111256889
Q ss_pred eeEEEE---cccccc---ce------eeec-ceEEecCCeEEEeeC----HHHHHHHHHhCC
Q 009871 147 IDIVTM---ERLTGK---DQ------KISE-NFYVRGDGTRAFYFS----NDFLTSLFKENG 191 (523)
Q Consensus 147 fD~V~~---~~~~~~---~~------~~~~-~~~~~~~g~~~~~~~----~~~l~~ll~~~G 191 (523)
||.|++ ....+. .. .+.. ...++++|.+.+... .+.+.+.+.+.|
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 999987 111000 00 0000 125788888776443 244566666665
No 215
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.25 E-value=1.2e-10 Score=116.05 Aligned_cols=132 Identities=11% Similarity=0.026 Sum_probs=105.4
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
..+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++++...++. .++.+...|..+. ++
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~--------~p- 233 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLS---GRAQVVVGSFFDP--------LP- 233 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT---TTEEEEECCTTSC--------CC-
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcC---cCeEEecCCCCCC--------CC-
Confidence 3456799999999998888888764 448999999 99999999999887664 5788888776522 22
Q ss_pred CCccEEEEccccCCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC--------------------CChhHH
Q 009871 412 EGFEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ--------------------VDEPSM 469 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~--~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~--------------------~~~~~~ 469 (523)
.+||+|++..++++... ...+++.+.++| +|||.+++...... .+..++
T Consensus 234 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L---------~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~ 304 (332)
T 3i53_A 234 AGAGGYVLSAVLHDWDDLSAVAILRRCAEAA---------GSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAEL 304 (332)
T ss_dssp CSCSEEEEESCGGGSCHHHHHHHHHHHHHHH---------TTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHH
T ss_pred CCCcEEEEehhhccCCHHHHHHHHHHHHHhc---------CCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHH
Confidence 28999999999987665 588999999999 77999998765321 234567
Q ss_pred HHHHHHcCCEEEEEcCC
Q 009871 470 LSAATQCGFRLVDKWPS 486 (523)
Q Consensus 470 ~~~~~~~gf~~~~~~~~ 486 (523)
.+.++++||++.+++..
T Consensus 305 ~~ll~~aGf~~~~~~~~ 321 (332)
T 3i53_A 305 GELAAQAGLAVRAAHPI 321 (332)
T ss_dssp HHHHHHTTEEEEEEEEC
T ss_pred HHHHHHCCCEEEEEEEC
Confidence 78889999999999864
No 216
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.25 E-value=4e-11 Score=117.24 Aligned_cols=133 Identities=11% Similarity=0.142 Sum_probs=94.4
Q ss_pred CCCCeEEEECCCccHHHHH----HHhcC-CCEE--EEEcCChHHHHHHHHHHHhc-CCCCCCCceEEEeeecCCCCcchh
Q 009871 334 VAGKKVLELGCGCGGICSM----VAAGS-ADLV--VATDGDSIALDLLAQNVTAN-LKPPFLAKLITKRLEWGNRDHIEA 405 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~----~a~~~-~~~V--~~~D~~~~~l~~~~~n~~~n-~~~~~~~~v~~~~ldw~~~~~~~~ 405 (523)
.++.+|||||||+|.++.. ++..+ ...| +++|.|+.|++.+++++... +. ..+.+ .|...+ ...
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~----~~v~~---~~~~~~-~~~ 122 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL----ENVKF---AWHKET-SSE 122 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC----TTEEE---EEECSC-HHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC----CcceE---EEEecc-hhh
Confidence 3567999999999965542 23332 3344 99999999999999987653 22 23333 333322 112
Q ss_pred hh-----hhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec------------------
Q 009871 406 IK-----EENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR------------------ 462 (523)
Q Consensus 406 ~~-----~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r------------------ 462 (523)
+. ++.+++||+|+++.++++..+...+++.+.++| +|||.++++...+
T Consensus 123 ~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~L---------kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 193 (292)
T 2aot_A 123 YQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLL---------GTNAKMLIIVVSGSSGWDKLWKKYGSRFPQD 193 (292)
T ss_dssp HHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTE---------EEEEEEEEEEECTTSHHHHHHHHHGGGSCCC
T ss_pred hhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHc---------CCCcEEEEEEecCCccHHHHHHHHHHhccCC
Confidence 21 134678999999999999999999999999999 6799998875332
Q ss_pred ----CCChhHHHHHHHHcCCEEEEE
Q 009871 463 ----QVDEPSMLSAATQCGFRLVDK 483 (523)
Q Consensus 463 ----~~~~~~~~~~~~~~gf~~~~~ 483 (523)
..+..++.+.++++||++...
T Consensus 194 ~~~~~~~~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 194 DLCQYITSDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp TTCCCCCHHHHHHHHHHHTCCEEEE
T ss_pred CcccCCCHHHHHHHHHHCCCceEEE
Confidence 123456778889999998774
No 217
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.25 E-value=2.7e-11 Score=114.41 Aligned_cols=108 Identities=9% Similarity=0.070 Sum_probs=79.2
Q ss_pred HHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCC
Q 009871 322 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 401 (523)
Q Consensus 322 ~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~ 401 (523)
.+.+++.... .++.+|||+|||+|.++..++..+. +|+++|+|+.+++.++++. .++.+...|..+.
T Consensus 29 ~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~- 95 (239)
T 3bxo_A 29 DIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL---------PDATLHQGDMRDF- 95 (239)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC---------TTCEEEECCTTTC-
T ss_pred HHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC---------CCCEEEECCHHHc-
Confidence 4555555443 3678999999999988888888765 8999999999999998763 2345555555432
Q ss_pred cchhhhhhcCCCccEEEE-ccccCCC---CChHHHHHHHHHHhhccCCCCCCCCCcEEEEE
Q 009871 402 HIEAIKEENNEGFEVILG-TDVSYIP---EAILPLFATAKELTASSNKSLREDQQPAFILC 458 (523)
Q Consensus 402 ~~~~~~~~~~~~fD~Ii~-~d~~y~~---~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~ 458 (523)
+. +++||+|++ .+++.+. +....+++.+.++| +|||.+++.
T Consensus 96 ------~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L---------~pgG~l~~~ 140 (239)
T 3bxo_A 96 ------RL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHL---------EPGGVVVVE 140 (239)
T ss_dssp ------CC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTE---------EEEEEEEEC
T ss_pred ------cc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhc---------CCCeEEEEE
Confidence 12 468999995 5577665 45678889999999 557777664
No 218
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.25 E-value=7e-12 Score=118.61 Aligned_cols=146 Identities=19% Similarity=0.243 Sum_probs=100.0
Q ss_pred cccchhHH--HHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceE
Q 009871 314 LMLWESAH--LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLI 391 (523)
Q Consensus 314 ~~~W~~a~--~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~ 391 (523)
+..|+..+ .+++.+. .+|.+|||||||+|..+..+++..+.+|+++|+++.+++.|+++...++. .+.
T Consensus 42 m~~we~~~m~~~a~~~~-----~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~-----~~~ 111 (236)
T 3orh_A 42 MERWETPYMHALAAAAS-----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH-----KVI 111 (236)
T ss_dssp EEGGGHHHHHHHHHHHT-----TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSS-----EEE
T ss_pred HHHHHHHHHHHHHHhhc-----cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCC-----ceE
Confidence 45687654 3455442 37889999999999888888777777999999999999999998876543 455
Q ss_pred EEeeecCCCCcchhhhhhcCCCccEEEEc-----cccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec----
Q 009871 392 TKRLEWGNRDHIEAIKEENNEGFEVILGT-----DVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR---- 462 (523)
Q Consensus 392 ~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~-----d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r---- 462 (523)
+...+|.+. ...++..+||.|+.- ....+......+++.+.++| +|||+++++....
T Consensus 112 ~~~~~a~~~-----~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvL---------kPGG~l~f~~~~~~~~~ 177 (236)
T 3orh_A 112 PLKGLWEDV-----APTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLL---------KPGGVLTYCNLTSWGEL 177 (236)
T ss_dssp EEESCHHHH-----GGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHE---------EEEEEEEECCHHHHHHH
T ss_pred EEeehHHhh-----cccccccCCceEEEeeeecccchhhhcchhhhhhhhhhee---------CCCCEEEEEecCCchhh
Confidence 555555321 123456789999752 22334456778899999999 7799998865321
Q ss_pred -C--CC------hhHHHHHHHHcCCEEEEE
Q 009871 463 -Q--VD------EPSMLSAATQCGFRLVDK 483 (523)
Q Consensus 463 -~--~~------~~~~~~~~~~~gf~~~~~ 483 (523)
. .. .......+.++||+++.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~L~eaGF~~~~i 207 (236)
T 3orh_A 178 MKSKYSDITIMFEETQVPALLEAGFRRENI 207 (236)
T ss_dssp TTTTCSCHHHHHHHHTHHHHHHHTCCGGGE
T ss_pred hhhhhhhhhhhhHHHHHHHHHHcCCeEEEE
Confidence 0 11 112344567889986443
No 219
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.25 E-value=2e-11 Score=121.33 Aligned_cols=112 Identities=16% Similarity=0.211 Sum_probs=86.7
Q ss_pred HHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcch
Q 009871 325 AVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIE 404 (523)
Q Consensus 325 ~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~ 404 (523)
+.+.......++++|||||||+|.++..+++.++.+|+++|++ .+++.+++++..|+.. .++.+...|..+.
T Consensus 28 ~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~---~~i~~~~~d~~~~---- 99 (328)
T 1g6q_1 28 NAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFS---DKITLLRGKLEDV---- 99 (328)
T ss_dssp HHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCT---TTEEEEESCTTTS----
T ss_pred HHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCC---CCEEEEECchhhc----
Confidence 3333333345788999999999988888888877799999999 5999999999998875 5677776665443
Q ss_pred hhhhhcCCCccEEEEccccC---CCCChHHHHHHHHHHhhccCCCCCCCCCcEEE
Q 009871 405 AIKEENNEGFEVILGTDVSY---IPEAILPLFATAKELTASSNKSLREDQQPAFI 456 (523)
Q Consensus 405 ~~~~~~~~~fD~Ii~~d~~y---~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~ 456 (523)
+++.++||+|++..+.| +...+..++..+.++| +|||.++
T Consensus 100 ---~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~L---------kpgG~li 142 (328)
T 1g6q_1 100 ---HLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYL---------VEGGLIF 142 (328)
T ss_dssp ---CCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHE---------EEEEEEE
T ss_pred ---cCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhc---------CCCeEEE
Confidence 12346899999975433 4667889999999999 6788887
No 220
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.25 E-value=9.1e-11 Score=118.86 Aligned_cols=133 Identities=12% Similarity=0.070 Sum_probs=103.7
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 410 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~ 410 (523)
...++.+|||+|||+|.++..++... ..+++++|+ +.+++.+++++..+++. .++.+...|+.+. +
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~--------~- 245 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLA---DRVTVAEGDFFKP--------L- 245 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT---TTEEEEECCTTSC--------C-
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCC---CceEEEeCCCCCc--------C-
Confidence 34467899999999998888888875 358999999 99999999999887764 4688877776532 1
Q ss_pred CCCccEEEEccccCCCCCh--HHHHHHHHHHhhccCCCCCCCCCcEEEEEEe--ec-----------------------C
Q 009871 411 NEGFEVILGTDVSYIPEAI--LPLFATAKELTASSNKSLREDQQPAFILCHI--FR-----------------------Q 463 (523)
Q Consensus 411 ~~~fD~Ii~~d~~y~~~~~--~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~--~r-----------------------~ 463 (523)
+..||+|+++.++++.... ..+++.+.++| +|||.+++... .. .
T Consensus 246 ~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L---------~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (374)
T 1qzz_A 246 PVTADVVLLSFVLLNWSDEDALTILRGCVRAL---------EPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRV 316 (374)
T ss_dssp SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHE---------EEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeccccCCCHHHHHHHHHHHHHhc---------CCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcC
Confidence 2359999999999876544 48999999999 67999888765 21 1
Q ss_pred CChhHHHHHHHHcCCEEEEEcCC
Q 009871 464 VDEPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 464 ~~~~~~~~~~~~~gf~~~~~~~~ 486 (523)
.+..++.+.++++||++.+++..
T Consensus 317 ~~~~~~~~ll~~aGf~~~~~~~~ 339 (374)
T 1qzz_A 317 RTRDEVVDLAGSAGLALASERTS 339 (374)
T ss_dssp CCHHHHHHHHHTTTEEEEEEEEE
T ss_pred CCHHHHHHHHHHCCCceEEEEEC
Confidence 24456777889999999888764
No 221
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.25 E-value=3.2e-11 Score=118.26 Aligned_cols=107 Identities=14% Similarity=0.089 Sum_probs=80.7
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||||||+|.++..++..+ .+|+++|+|+.+++.+++++..++... ..++.+...|..+. ++ +++|
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~v~~~~~d~~~~-------~~-~~~f 151 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLG-WEVTALELSTSVLAAFRKRLAEAPADV-RDRCTLVQGDMSAF-------AL-DKRF 151 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTT-CCEEEEESCHHHHHHHHHHHHTSCHHH-HTTEEEEECBTTBC-------CC-SCCE
T ss_pred CCCcEEEEeccCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHhhccccc-ccceEEEeCchhcC-------Cc-CCCc
Confidence 34499999999998888888885 579999999999999999988754210 03567777766543 11 4689
Q ss_pred cEEEEc-cccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 009871 415 EVILGT-DVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 415 D~Ii~~-d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
|+|+++ .++++.. ....+++.+.++| +|||.+++...
T Consensus 152 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L---------~pgG~l~~~~~ 191 (299)
T 3g2m_A 152 GTVVISSGSINELDEADRRGLYASVREHL---------EPGGKFLLSLA 191 (299)
T ss_dssp EEEEECHHHHTTSCHHHHHHHHHHHHHHE---------EEEEEEEEEEE
T ss_pred CEEEECCcccccCCHHHHHHHHHHHHHHc---------CCCcEEEEEee
Confidence 999865 5555443 4689999999999 67898888653
No 222
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.24 E-value=3.3e-11 Score=115.37 Aligned_cols=129 Identities=17% Similarity=0.145 Sum_probs=99.2
Q ss_pred CCCCCCCeEEEECCCccHHHHHHHhc-C-CCEEEEEcCChHHHHHHHHHHHhc-CCCCCCCceEEEeeecCCCCcchhhh
Q 009871 331 PTIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTAN-LKPPFLAKLITKRLEWGNRDHIEAIK 407 (523)
Q Consensus 331 ~~~~~~~~VLElG~G~G~l~~~~a~~-~-~~~V~~~D~~~~~l~~~~~n~~~n-~~~~~~~~v~~~~ldw~~~~~~~~~~ 407 (523)
....++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+++|+..+ +. .++.+...|+.+.
T Consensus 92 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~----~~v~~~~~d~~~~------- 160 (258)
T 2pwy_A 92 LDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV----ENVRFHLGKLEEA------- 160 (258)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC----CCEEEEESCGGGC-------
T ss_pred cCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC----CCEEEEECchhhc-------
Confidence 34567889999999999888888887 5 469999999999999999999887 62 4567766665432
Q ss_pred hhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEcC
Q 009871 408 EENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 408 ~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
+++.++||+|++. ......+++.+.++| +|+|.+++..... .....+.+.+++.||...++++
T Consensus 161 ~~~~~~~D~v~~~-----~~~~~~~l~~~~~~L---------~~gG~l~~~~~~~-~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 161 ELEEAAYDGVALD-----LMEPWKVLEKAALAL---------KPDRFLVAYLPNI-TQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp CCCTTCEEEEEEE-----SSCGGGGHHHHHHHE---------EEEEEEEEEESCH-HHHHHHHHHHTTTTEEEEEEEE
T ss_pred CCCCCCcCEEEEC-----CcCHHHHHHHHHHhC---------CCCCEEEEEeCCH-HHHHHHHHHHHHCCCceEEEEE
Confidence 1334689999983 345668899999999 6799988876542 2234677778889999887765
No 223
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.24 E-value=6.9e-11 Score=113.09 Aligned_cols=121 Identities=17% Similarity=0.122 Sum_probs=91.7
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhh-CCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCc
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSS 146 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~ 146 (523)
.+...++.+|||+|||+|.++..+++. .|+.+|+|+|+|+.+++.|+++.... ..++++.++|+.+. ++++++
T Consensus 91 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~----~~~~~~ 166 (258)
T 2pwy_A 91 LLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA----ELEEAA 166 (258)
T ss_dssp HTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC----CCCTTC
T ss_pred HcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc----CCCCCC
Confidence 344467889999999999999999998 77889999999999999999976432 36799999999876 466789
Q ss_pred eeEEEE-----ccccccceeeecceEEecCCeEEEee----CHHHHHHHHHhCCCcEEEEEe
Q 009871 147 IDIVTM-----ERLTGKDQKISENFYVRGDGTRAFYF----SNDFLTSLFKENGFDVEELGL 199 (523)
Q Consensus 147 fD~V~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~l~~ll~~~Gf~~~~~~~ 199 (523)
||+|++ ..++....+ .++++|.++... ...++.+.+++.||..++...
T Consensus 167 ~D~v~~~~~~~~~~l~~~~~-----~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 167 YDGVALDLMEPWKVLEKAAL-----ALKPDRFLVAYLPNITQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp EEEEEEESSCGGGGHHHHHH-----HEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEEEEE
T ss_pred cCEEEECCcCHHHHHHHHHH-----hCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEEEEE
Confidence 999998 122222222 577788776644 234566777889998766543
No 224
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.23 E-value=3.5e-11 Score=116.04 Aligned_cols=145 Identities=16% Similarity=0.089 Sum_probs=98.2
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeec
Q 009871 318 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEW 397 (523)
Q Consensus 318 ~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw 397 (523)
.++..|...|.......++++|||||||||.++..+++.++.+|+++|+++.||+.+.++ + .++... .-
T Consensus 68 rg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~---~------~rv~~~--~~ 136 (291)
T 3hp7_A 68 RGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ---D------DRVRSM--EQ 136 (291)
T ss_dssp TTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT---C------TTEEEE--CS
T ss_pred chHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---C------ccccee--cc
Confidence 456677777776655557899999999999999888888888999999999999875432 1 122111 00
Q ss_pred CCCCcchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-----C---------
Q 009871 398 GNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR-----Q--------- 463 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r-----~--------- 463 (523)
.+...+. ...++..+||+|++ |+.+. .+..++..+.++| +|||.+++...+. .
T Consensus 137 ~ni~~l~-~~~l~~~~fD~v~~-d~sf~--sl~~vL~e~~rvL---------kpGG~lv~lvkPqfe~~~~~~~~~G~vr 203 (291)
T 3hp7_A 137 YNFRYAE-PVDFTEGLPSFASI-DVSFI--SLNLILPALAKIL---------VDGGQVVALVKPQFEAGREQIGKNGIVR 203 (291)
T ss_dssp CCGGGCC-GGGCTTCCCSEEEE-CCSSS--CGGGTHHHHHHHS---------CTTCEEEEEECGGGTSCGGGCC-CCCCC
T ss_pred cCceecc-hhhCCCCCCCEEEE-EeeHh--hHHHHHHHHHHHc---------CcCCEEEEEECcccccChhhcCCCCccC
Confidence 1100110 01233345999997 44443 5789999999999 7799998872220 0
Q ss_pred ------CChhHHHHHHHHcCCEEEEEcCC
Q 009871 464 ------VDEPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 464 ------~~~~~~~~~~~~~gf~~~~~~~~ 486 (523)
.....+.+.+.+.||.+..+..+
T Consensus 204 d~~~~~~~~~~v~~~~~~~Gf~v~~~~~s 232 (291)
T 3hp7_A 204 ESSIHEKVLETVTAFAVDYGFSVKGLDFS 232 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHTTEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEEEC
Confidence 01234667788999999988764
No 225
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.23 E-value=5.5e-11 Score=112.14 Aligned_cols=135 Identities=16% Similarity=0.126 Sum_probs=94.4
Q ss_pred CCCCCCCCeEEEECCCccHHHHHHHhc-C-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhh
Q 009871 330 NPTIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIK 407 (523)
Q Consensus 330 ~~~~~~~~~VLElG~G~G~l~~~~a~~-~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~ 407 (523)
...+.++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+.+++..+ .++.+...|..+...+
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~------~~v~~~~~d~~~~~~~---- 141 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR------TNIIPVIEDARHPHKY---- 141 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC------TTEEEECSCTTCGGGG----
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc------CCeEEEEcccCChhhh----
Confidence 334557889999999999998888887 3 469999999999999888888875 3456655555432111
Q ss_pred hhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC----CChhHH----HHHHHHcCCE
Q 009871 408 EENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ----VDEPSM----LSAATQCGFR 479 (523)
Q Consensus 408 ~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~----~~~~~~----~~~~~~~gf~ 479 (523)
+...++||+|++. +. .+.....++..+.++| +|||.+++....+. .....+ .+.+++.||+
T Consensus 142 ~~~~~~~D~V~~~-~~-~~~~~~~~~~~~~~~L---------kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 210 (233)
T 2ipx_A 142 RMLIAMVDVIFAD-VA-QPDQTRIVALNAHTFL---------RNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMK 210 (233)
T ss_dssp GGGCCCEEEEEEC-CC-CTTHHHHHHHHHHHHE---------EEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEE
T ss_pred cccCCcEEEEEEc-CC-CccHHHHHHHHHHHHc---------CCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCc
Confidence 2235689999984 33 3444456688899999 67999998665421 111111 4666789999
Q ss_pred EEEEcC
Q 009871 480 LVDKWP 485 (523)
Q Consensus 480 ~~~~~~ 485 (523)
+.++..
T Consensus 211 ~~~~~~ 216 (233)
T 2ipx_A 211 PQEQLT 216 (233)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 988644
No 226
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.23 E-value=5e-12 Score=119.58 Aligned_cols=127 Identities=20% Similarity=0.192 Sum_probs=89.2
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||||||+|.++..++..+..+|+++|+|+.|++.|++++..++ .++.+...|+.+. +.++.+++|
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-----~~v~~~~~d~~~~-----~~~~~~~~f 129 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT-----HKVIPLKGLWEDV-----APTLPDGHF 129 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS-----SEEEEEESCHHHH-----GGGSCTTCE
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC-----CCeEEEecCHHHh-----hcccCCCce
Confidence 677999999999988888877666699999999999999999887654 3466655554321 113456799
Q ss_pred cEEEE-ccccC----CCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC--------CC-----hhHHHHHHHHc
Q 009871 415 EVILG-TDVSY----IPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ--------VD-----EPSMLSAATQC 476 (523)
Q Consensus 415 D~Ii~-~d~~y----~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~--------~~-----~~~~~~~~~~~ 476 (523)
|+|++ ...+. +......+++.+.++| +|||.++++..... .. .......+.+.
T Consensus 130 D~V~~d~~~~~~~~~~~~~~~~~l~~~~r~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 200 (236)
T 1zx0_A 130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLL---------KPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEA 200 (236)
T ss_dssp EEEEECCCCCBGGGTTTHHHHHHHHTHHHHE---------EEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHT
T ss_pred EEEEECCcccchhhhhhhhHHHHHHHHHHhc---------CCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHC
Confidence 99999 33321 1223446789999999 67999987654311 00 12345667889
Q ss_pred CCEE
Q 009871 477 GFRL 480 (523)
Q Consensus 477 gf~~ 480 (523)
||+.
T Consensus 201 GF~~ 204 (236)
T 1zx0_A 201 GFRR 204 (236)
T ss_dssp TCCG
T ss_pred CCCC
Confidence 9984
No 227
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.23 E-value=1.4e-11 Score=119.37 Aligned_cols=119 Identities=18% Similarity=0.253 Sum_probs=89.1
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
.++.+|||+|||+|..+..+++..|+.+|+|+|+|+.|++.|+++....+ .+++++++|+.+. +++++||+|++
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-----~~~~~fD~Iv~ 182 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-----LAGQQFAMIVS 182 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-----GTTCCEEEEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-----cccCCccEEEE
Confidence 46779999999999999999988888999999999999999999864332 4799999998753 34678999999
Q ss_pred c-ccc--------------ccc-------------eeeec--ceEEecCCeEEE---eeCHHHHHHHHHhCCCcEEEE
Q 009871 153 E-RLT--------------GKD-------------QKISE--NFYVRGDGTRAF---YFSNDFLTSLFKENGFDVEEL 197 (523)
Q Consensus 153 ~-~~~--------------~~~-------------~~~~~--~~~~~~~g~~~~---~~~~~~l~~ll~~~Gf~~~~~ 197 (523)
. .+. .+. ..+.. ..+++++|.+++ +.+.+++.++++++||..+.+
T Consensus 183 npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 183 NPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVET 260 (276)
T ss_dssp CCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCE
T ss_pred CCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEE
Confidence 2 110 000 00000 125778888776 347789999999999986443
No 228
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.22 E-value=1.6e-10 Score=116.32 Aligned_cols=131 Identities=11% Similarity=0.105 Sum_probs=104.2
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
..++.+|||+|||+|.++..++... ..+|+++|+ +.+++.+++++..++.. .++.+...|..+. . .
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-~--------~ 254 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVA---DRMRGIAVDIYKE-S--------Y 254 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCT---TTEEEEECCTTTS-C--------C
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCC---CCEEEEeCccccC-C--------C
Confidence 4567899999999999888888875 358999999 99999999999987764 4688877776543 1 1
Q ss_pred CCccEEEEccccCCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec----------------------C----
Q 009871 412 EGFEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFR----------------------Q---- 463 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~--~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r----------------------~---- 463 (523)
..+|+|+++.++++... ...+++.+.++| +|||.+++..... .
T Consensus 255 ~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L---------~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 325 (359)
T 1x19_A 255 PEADAVLFCRILYSANEQLSTIMCKKAFDAM---------RSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGF 325 (359)
T ss_dssp CCCSEEEEESCGGGSCHHHHHHHHHHHHTTC---------CTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCC
T ss_pred CCCCEEEEechhccCCHHHHHHHHHHHHHhc---------CCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCC
Confidence 24599999999987665 788999999999 7799998776221 1
Q ss_pred CChhHHHHHHHHcCCEEEEEcC
Q 009871 464 VDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 464 ~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
.+..++.+.++++||++.+++.
T Consensus 326 ~t~~e~~~ll~~aGf~~v~~~~ 347 (359)
T 1x19_A 326 KEQARYKEILESLGYKDVTMVR 347 (359)
T ss_dssp CCGGGHHHHHHHHTCEEEEEEE
T ss_pred CCHHHHHHHHHHCCCceEEEEe
Confidence 3556788889999999988876
No 229
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.22 E-value=1.4e-10 Score=112.42 Aligned_cols=113 Identities=18% Similarity=0.217 Sum_probs=86.2
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
.++.+|||+|||+|.++..+++.++. +|+|+|+|+.|++.|+++...++ .+++++++|+.+. +. +++||+|+
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~----~~-~~~fD~Vi 197 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF----PG-ENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC----CC-CSCEEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHh----cc-cCCccEEE
Confidence 45889999999999999999998654 79999999999999999875432 4599999999876 22 67899999
Q ss_pred Ec------cccccceeeecceEEecCCeEEEee----------CHHHHHHHHHhCCCcEEEE
Q 009871 152 ME------RLTGKDQKISENFYVRGDGTRAFYF----------SNDFLTSLFKENGFDVEEL 197 (523)
Q Consensus 152 ~~------~~~~~~~~~~~~~~~~~~g~~~~~~----------~~~~l~~ll~~~Gf~~~~~ 197 (523)
+. .++....+ .++++|.+.+.. ..+++.+.++++||....+
T Consensus 198 ~~~p~~~~~~l~~~~~-----~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 198 MGYVVRTHEFIPKALS-----IAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp ECCCSSGGGGHHHHHH-----HEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred ECCchhHHHHHHHHHH-----HCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEEe
Confidence 91 22222222 567777766521 3477899999999987553
No 230
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.22 E-value=3.4e-11 Score=111.69 Aligned_cols=123 Identities=15% Similarity=0.271 Sum_probs=80.9
Q ss_pred cCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 72 SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 72 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
...++.+|||+|||+|..+..+++..++.+|+|+|+|+.|++.+.+.++.. .++.++++|+.......+++ ++||+|+
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~ 131 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIY 131 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEE
Confidence 345778999999999999999998866678999999999876555443222 46888888887531101333 7899999
Q ss_pred Eccccccce--e-eec-ceEEecCCeEEEee---------CHHHHH----HHHHhCCCcEEEEE
Q 009871 152 MERLTGKDQ--K-ISE-NFYVRGDGTRAFYF---------SNDFLT----SLFKENGFDVEELG 198 (523)
Q Consensus 152 ~~~~~~~~~--~-~~~-~~~~~~~g~~~~~~---------~~~~l~----~ll~~~Gf~~~~~~ 198 (523)
+.-. .+.. . +.. ...++++|.+++.. +.+++. +.++++ |.+++..
T Consensus 132 ~~~~-~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~ 193 (210)
T 1nt2_A 132 QDIA-QKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHG 193 (210)
T ss_dssp ECCC-STTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEE
T ss_pred Eecc-ChhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeee
Confidence 9211 1110 0 111 12688888887642 334442 237878 9877654
No 231
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.22 E-value=2.7e-11 Score=119.98 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=62.6
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCce
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
.+...++.+|||||||+|..+..+++.+ +++|+|+|+|+.|++.|+++....+ .++++.++|+.++ + ++|
T Consensus 85 ~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~---~~f 156 (318)
T 2fk8_A 85 KLDLKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF----A---EPV 156 (318)
T ss_dssp TSCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC----C---CCC
T ss_pred hcCCCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC----C---CCc
Confidence 3444678899999999999999999885 5689999999999999998764332 5699999999755 2 789
Q ss_pred eEEEE
Q 009871 148 DIVTM 152 (523)
Q Consensus 148 D~V~~ 152 (523)
|+|++
T Consensus 157 D~v~~ 161 (318)
T 2fk8_A 157 DRIVS 161 (318)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99999
No 232
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.22 E-value=1.1e-11 Score=118.91 Aligned_cols=67 Identities=15% Similarity=0.107 Sum_probs=58.7
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++.. . .+.++|+.++ ++++++||+|++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~---~--~~~~~d~~~~----~~~~~~fD~v~~ 120 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV---K--NVVEAKAEDL----PFPSGAFEAVLA 120 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC---S--CEEECCTTSC----CSCTTCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC---C--CEEECcHHHC----CCCCCCEEEEEE
Confidence 6789999999999999999987 5689999999999999998754 1 2889999877 567889999999
No 233
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.21 E-value=4.9e-11 Score=119.51 Aligned_cols=115 Identities=18% Similarity=0.256 Sum_probs=89.2
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCc
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 402 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~ 402 (523)
..+.+.......++.+|||||||+|.++..+++.++.+|+++|+++ +++.+++++..|+.. .++.+...|+.+..
T Consensus 38 y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~---~~v~~~~~d~~~~~- 112 (348)
T 2y1w_A 38 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLT---DRIVVIPGKVEEVS- 112 (348)
T ss_dssp HHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCT---TTEEEEESCTTTCC-
T ss_pred HHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCC---CcEEEEEcchhhCC-
Confidence 3445555555568899999999999988888888777999999996 889999999998875 46777777665431
Q ss_pred chhhhhhcCCCccEEEEccccCC--CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEE
Q 009871 403 IEAIKEENNEGFEVILGTDVSYI--PEAILPLFATAKELTASSNKSLREDQQPAFILC 458 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~~y~--~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~ 458 (523)
+ +++||+|++..+.++ .+.....+..+.++| +|+|.++++
T Consensus 113 ------~-~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~li~~ 154 (348)
T 2y1w_A 113 ------L-PEQVDIIISEPMGYMLFNERMLESYLHAKKYL---------KPSGNMFPT 154 (348)
T ss_dssp ------C-SSCEEEEEECCCBTTBTTTSHHHHHHHGGGGE---------EEEEEEESC
T ss_pred ------C-CCceeEEEEeCchhcCChHHHHHHHHHHHhhc---------CCCeEEEEe
Confidence 1 358999999888765 345667777788899 679998854
No 234
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.21 E-value=1.4e-11 Score=117.79 Aligned_cols=113 Identities=13% Similarity=0.137 Sum_probs=85.8
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEEc
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTME 153 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (523)
.++.+|||+|||+|.++..+++.++ +|+|+|+|+.|++.|+++...++..+++.++|+.+. +++++||+|++.
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-----~~~~~fD~Vv~n 191 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-----LPFGPFDLLVAN 191 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-----GGGCCEEEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-----CcCCCCCEEEEC
Confidence 4678999999999999999988754 899999999999999998754433388899888752 346789999991
Q ss_pred -------cccccceeeecceEEecCCeEEE----eeCHHHHHHHHHhCCCcEEEEE
Q 009871 154 -------RLTGKDQKISENFYVRGDGTRAF----YFSNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 154 -------~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~l~~ll~~~Gf~~~~~~ 198 (523)
.+.....+ .++++|.++. ..+.+++.++++++||.++++.
T Consensus 192 ~~~~~~~~~l~~~~~-----~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 192 LYAELHAALAPRYRE-----ALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp CCHHHHHHHHHHHHH-----HEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEE
T ss_pred CcHHHHHHHHHHHHH-----HcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEe
Confidence 11122222 4667776654 2367899999999999987664
No 235
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.21 E-value=6.4e-11 Score=121.80 Aligned_cols=142 Identities=13% Similarity=0.159 Sum_probs=104.7
Q ss_pred HHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCC
Q 009871 321 HLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNR 400 (523)
Q Consensus 321 ~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~ 400 (523)
..+++.+.......++.+|||+|||+|.++..++..+. +|+++|+|+.+++.++++ +.. .....+..
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~----~~~-------~~~~~~~~- 159 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK----GIR-------VRTDFFEK- 159 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT----TCC-------EECSCCSH-
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc----CCC-------cceeeech-
Confidence 34566666665566788999999999988888888765 899999999999998865 221 11101110
Q ss_pred CcchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee------------------c
Q 009871 401 DHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF------------------R 462 (523)
Q Consensus 401 ~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~------------------r 462 (523)
.....+ ++.+++||+|++..++++..+...+++.+.++| +|||.+++.... +
T Consensus 160 ~~~~~l-~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~L---------kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 229 (416)
T 4e2x_A 160 ATADDV-RRTEGPANVIYAANTLCHIPYVQSVLEGVDALL---------APDGVFVFEDPYLGDIVAKTSFDQIFDEHFF 229 (416)
T ss_dssp HHHHHH-HHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHE---------EEEEEEEEEEECHHHHHHHTCGGGCSTTCCE
T ss_pred hhHhhc-ccCCCCEEEEEECChHHhcCCHHHHHHHHHHHc---------CCCeEEEEEeCChHHhhhhcchhhhhhhhhh
Confidence 111111 234579999999999999999999999999999 679999987543 1
Q ss_pred CCChhHHHHHHHHcCCEEEEEcC
Q 009871 463 QVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 463 ~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
..+...+...++++||++.++..
T Consensus 230 ~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 230 LFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp ECCHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCHHHHHHHHHHcCCEEEEEEE
Confidence 12345788889999999988765
No 236
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.21 E-value=3.8e-11 Score=107.10 Aligned_cols=108 Identities=19% Similarity=0.151 Sum_probs=80.8
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||+|||+|.++..+++.++. |+++|+|+.+++.+++|+..++. ++.+...|+.+. .... .....+|
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~d~~~~--~~~~-~~~~~~~ 111 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTGL-----GARVVALPVEVF--LPEA-KAQGERF 111 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHTC-----CCEEECSCHHHH--HHHH-HHTTCCE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcCC-----ceEEEeccHHHH--HHhh-hccCCce
Confidence 6789999999999888888888765 99999999999999999998765 345554444321 1110 1113489
Q ss_pred cEEEEccccCCCCChHHHHHHHH--HHhhccCCCCCCCCCcEEEEEEeec
Q 009871 415 EVILGTDVSYIPEAILPLFATAK--ELTASSNKSLREDQQPAFILCHIFR 462 (523)
Q Consensus 415 D~Ii~~d~~y~~~~~~~l~~~l~--~ll~~~~~~~~~~~~g~~~l~~~~r 462 (523)
|+|+++.+.. ...+.+++.+. ++| +|+|.++++...+
T Consensus 112 D~i~~~~~~~--~~~~~~~~~~~~~~~L---------~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 112 TVAFMAPPYA--MDLAALFGELLASGLV---------EAGGLYVLQHPKD 150 (171)
T ss_dssp EEEEECCCTT--SCTTHHHHHHHHHTCE---------EEEEEEEEEEETT
T ss_pred EEEEECCCCc--hhHHHHHHHHHhhccc---------CCCcEEEEEeCCc
Confidence 9999976644 67778888888 788 6799998887654
No 237
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.21 E-value=2.2e-10 Score=106.14 Aligned_cols=132 Identities=15% Similarity=0.155 Sum_probs=87.9
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
..++.+|||||||+|.++..++... ..+|+++|+|+.|++.+.+++... .++.+...|... .....++ .
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~------~~v~~~~~d~~~---~~~~~~~-~ 124 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER------NNIIPLLFDASK---PWKYSGI-V 124 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC------SSEEEECSCTTC---GGGTTTT-C
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC------CCeEEEEcCCCC---chhhccc-c
Confidence 4578899999999998888888764 358999999999988777665542 234443333222 1110122 3
Q ss_pred CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC----CChhHHH----HHHHHcCCEEEEE
Q 009871 412 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ----VDEPSML----SAATQCGFRLVDK 483 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~----~~~~~~~----~~~~~~gf~~~~~ 483 (523)
++||+|+++ + ..+.....+++.+.++| +|||.++++...+. ...++++ +.+++. |++.+.
T Consensus 125 ~~fD~V~~~-~-~~~~~~~~~l~~~~r~L---------kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~ 192 (210)
T 1nt2_A 125 EKVDLIYQD-I-AQKNQIEILKANAEFFL---------KEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKH 192 (210)
T ss_dssp CCEEEEEEC-C-CSTTHHHHHHHHHHHHE---------EEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEE
T ss_pred cceeEEEEe-c-cChhHHHHHHHHHHHHh---------CCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeee
Confidence 689999986 2 23333445689999999 67999999864432 2233433 336777 999888
Q ss_pred cCC
Q 009871 484 WPS 486 (523)
Q Consensus 484 ~~~ 486 (523)
...
T Consensus 193 ~~~ 195 (210)
T 1nt2_A 193 GSL 195 (210)
T ss_dssp EEC
T ss_pred ecC
Confidence 653
No 238
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.21 E-value=1.3e-10 Score=111.77 Aligned_cols=106 Identities=10% Similarity=0.049 Sum_probs=81.7
Q ss_pred CCCCCCCeEEEECCCccHHHHHHHh-cCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhh
Q 009871 331 PTIVAGKKVLELGCGCGGICSMVAA-GSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE 409 (523)
Q Consensus 331 ~~~~~~~~VLElG~G~G~l~~~~a~-~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~ 409 (523)
..+.++.+|||||||+|.++..+++ ....+|+++|+|++|++.|++|+...+. .++.+...|-.+ +
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl----~~v~~v~gDa~~---------l 184 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV----DGVNVITGDETV---------I 184 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC----CSEEEEESCGGG---------G
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC----CCeEEEECchhh---------C
Confidence 3456899999999999877655444 3556899999999999999999988765 356665443221 2
Q ss_pred cCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 410 NNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 410 ~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
++++||+|+.+.. ......+++.+.+.| +|||++++....
T Consensus 185 ~d~~FDvV~~~a~---~~d~~~~l~el~r~L---------kPGG~Lvv~~~~ 224 (298)
T 3fpf_A 185 DGLEFDVLMVAAL---AEPKRRVFRNIHRYV---------DTETRIIYRTYT 224 (298)
T ss_dssp GGCCCSEEEECTT---CSCHHHHHHHHHHHC---------CTTCEEEEEECC
T ss_pred CCCCcCEEEECCC---ccCHHHHHHHHHHHc---------CCCcEEEEEcCc
Confidence 3578999998644 467889999999999 789999987643
No 239
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.21 E-value=9.8e-11 Score=116.72 Aligned_cols=132 Identities=13% Similarity=0.068 Sum_probs=103.8
Q ss_pred CCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
.++.+|||+|||+|.++..++... ..+|+++|++ .+++.+++++..+++. .++.+...|+.+. ++ +.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-------~~-~~ 231 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVA---SRYHTIAGSAFEV-------DY-GN 231 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCG---GGEEEEESCTTTS-------CC-CS
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCC---cceEEEecccccC-------CC-CC
Confidence 467899999999998888888774 4589999999 9999999999887664 4688887776543 11 23
Q ss_pred CccEEEEccccCCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-------------------------CC
Q 009871 413 GFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------------------VD 465 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~--~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-------------------------~~ 465 (523)
.||+|++..++++. +....+++.+.++| +|||.+++...... .+
T Consensus 232 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L---------~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 302 (335)
T 2r3s_A 232 DYDLVLLPNFLHHFDVATCEQLLRKIKTAL---------AVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYT 302 (335)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHE---------EEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCC
T ss_pred CCcEEEEcchhccCCHHHHHHHHHHHHHhC---------CCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCC
Confidence 59999999999886 45579999999999 67998888765422 12
Q ss_pred hhHHHHHHHHcCCEEEEEcCC
Q 009871 466 EPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 466 ~~~~~~~~~~~gf~~~~~~~~ 486 (523)
..++.+.++++||+..++...
T Consensus 303 ~~~~~~ll~~aGf~~~~~~~~ 323 (335)
T 2r3s_A 303 FAEYESMFSNAGFSHSQLHSL 323 (335)
T ss_dssp HHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHCCCCeeeEEEC
Confidence 456777888999999988763
No 240
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.21 E-value=6.4e-12 Score=111.99 Aligned_cols=106 Identities=11% Similarity=0.079 Sum_probs=78.4
Q ss_pred CCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
+..+|||||||+|.++..++... ..+|+++|+|+.|++.+++|+..++.. .++.+. | ... ..++++
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~---~~v~~~--d-----~~~---~~~~~~ 115 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTT---IKYRFL--N-----KES---DVYKGT 115 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCS---SEEEEE--C-----CHH---HHTTSE
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCC---ccEEEe--c-----ccc---cCCCCC
Confidence 46799999999998888887762 339999999999999999999998875 345552 1 111 234678
Q ss_pred ccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC
Q 009871 414 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ 463 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~ 463 (523)
||+|++..+++.-+..+..+..+.+.| +|+|.| +++..|.
T Consensus 116 ~DvVLa~k~LHlL~~~~~al~~v~~~L---------~pggvf-ISfptks 155 (200)
T 3fzg_A 116 YDVVFLLKMLPVLKQQDVNILDFLQLF---------HTQNFV-ISFPIKS 155 (200)
T ss_dssp EEEEEEETCHHHHHHTTCCHHHHHHTC---------EEEEEE-EEEECCC
T ss_pred cChhhHhhHHHhhhhhHHHHHHHHHHh---------CCCCEE-EEeChHH
Confidence 999999999887665556666788888 446554 5555443
No 241
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.21 E-value=3.5e-10 Score=114.73 Aligned_cols=170 Identities=18% Similarity=0.181 Sum_probs=109.4
Q ss_pred eEEEEEEcCceEEEEEecccccccCCCcccccchhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEE
Q 009871 285 EMIEVNLRDRSFKIEVLSKEYQHTCRSTGLMLWESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVAT 364 (523)
Q Consensus 285 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~G~~~W~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~ 364 (523)
+.+.+..+|..+.+.... .-.+|... +. .....++... ++.+|||+|||+|.++..++.. +.+|+++
T Consensus 171 ~~~~~~e~g~~f~i~~~~------~~~~g~f~-~~-~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~-~~~v~~v 237 (382)
T 1wxx_A 171 ERVQVQEGRVRYLVDLRA------GQKTGAYL-DQ-RENRLYMERF----RGERALDVFSYAGGFALHLALG-FREVVAV 237 (382)
T ss_dssp SEEEEEETTEEEEEECST------TSCCCCCG-GG-HHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH-EEEEEEE
T ss_pred ceEEEEECCEEEEEEchh------cccCcccc-ch-HHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh-CCEEEEE
Confidence 355566677666666322 12344322 11 1122333322 6789999999999999888887 6789999
Q ss_pred cCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCccEEEEccccCCC---------CChHHHHHH
Q 009871 365 DGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIP---------EAILPLFAT 435 (523)
Q Consensus 365 D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~---------~~~~~l~~~ 435 (523)
|+++.+++.+++|+..|++. .+.+...|..+. ...+ .....+||+|++....+.. .....++..
T Consensus 238 D~s~~~~~~a~~n~~~n~~~----~~~~~~~d~~~~--~~~~-~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~ 310 (382)
T 1wxx_A 238 DSSAEALRRAEENARLNGLG----NVRVLEANAFDL--LRRL-EKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLR 310 (382)
T ss_dssp ESCHHHHHHHHHHHHHTTCT----TEEEEESCHHHH--HHHH-HHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHcCCC----CceEEECCHHHH--HHHH-HhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHH
Confidence 99999999999999999874 255555443221 1100 0114689999985433332 235667788
Q ss_pred HHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHH----HHHHHcCCEEEEE
Q 009871 436 AKELTASSNKSLREDQQPAFILCHIFRQVDEPSML----SAATQCGFRLVDK 483 (523)
Q Consensus 436 l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~----~~~~~~gf~~~~~ 483 (523)
+.++| +|||.++++........+.+. +.+.+.|..+..+
T Consensus 311 ~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 353 (382)
T 1wxx_A 311 AIKLL---------KEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVV 353 (382)
T ss_dssp HHHTE---------EEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHhc---------CCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 88888 679999998877666654443 3455677555444
No 242
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.21 E-value=8e-11 Score=109.81 Aligned_cols=128 Identities=12% Similarity=0.092 Sum_probs=88.8
Q ss_pred CCCeEEEECCCccHHHHHHHhcCC-CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhh-hhcCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIK-EENNE 412 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~-~~~~~ 412 (523)
.+.+|||||||+|.++..+|+..+ ..|+++|+++.+++.+++|+..+++. ++.+...|..+ .+. .++++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~----nv~~~~~Da~~-----~l~~~~~~~ 104 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS----NLRVMCHDAVE-----VLHKMIPDN 104 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS----SEEEECSCHHH-----HHHHHSCTT
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC----cEEEEECCHHH-----HHHHHcCCC
Confidence 567999999999998888888754 58999999999999999999987763 46655433211 111 14567
Q ss_pred CccEEEEc--cccCCCCCh------HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHH-cCCEEE
Q 009871 413 GFEVILGT--DVSYIPEAI------LPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQ-CGFRLV 481 (523)
Q Consensus 413 ~fD~Ii~~--d~~y~~~~~------~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~-~gf~~~ 481 (523)
+||.|++. |........ +.+++.+.++| +|||.+++....... ...+.+.+.. .+|+..
T Consensus 105 ~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~L---------kpGG~l~i~td~~~~-~~~~~~~~~~~~~~~~~ 172 (218)
T 3dxy_A 105 SLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKL---------QLGGVFHMATDWEPY-AEHMLEVMSSIDGYKNL 172 (218)
T ss_dssp CEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHE---------EEEEEEEEEESCHHH-HHHHHHHHHTSTTEEEC
T ss_pred ChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHc---------CCCcEEEEEeCCHHH-HHHHHHHHHhCCCcccc
Confidence 99999987 443332222 35999999999 679999998754321 1234444444 356543
No 243
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.20 E-value=2.5e-10 Score=108.86 Aligned_cols=102 Identities=20% Similarity=0.153 Sum_probs=76.4
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.+++++..++. ++.+...|+.+. +. +.+
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~-----~v~~~~~d~~~~-------~~-~~~ 105 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERG-YEVVGLDLHEEMLRVARRKAKERNL-----KIEFLQGDVLEI-------AF-KNE 105 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTC-----CCEEEESCGGGC-------CC-CSC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHhcCC-----ceEEEECChhhc-------cc-CCC
Confidence 467899999999998888888875 4899999999999999999987653 355555555432 11 358
Q ss_pred ccEEEEc-ccc-C-CCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEE
Q 009871 414 FEVILGT-DVS-Y-IPEAILPLFATAKELTASSNKSLREDQQPAFILC 458 (523)
Q Consensus 414 fD~Ii~~-d~~-y-~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~ 458 (523)
||+|++. ..+ | ..+....+++.+.++| +|||.+++.
T Consensus 106 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L---------~pgG~li~~ 144 (252)
T 1wzn_A 106 FDAVTMFFSTIMYFDEEDLRKLFSKVAEAL---------KPGGVFITD 144 (252)
T ss_dssp EEEEEECSSGGGGSCHHHHHHHHHHHHHHE---------EEEEEEEEE
T ss_pred ccEEEEcCCchhcCCHHHHHHHHHHHHHHc---------CCCeEEEEe
Confidence 9999975 222 2 2346788999999999 567777654
No 244
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.20 E-value=3.9e-11 Score=116.21 Aligned_cols=119 Identities=18% Similarity=0.122 Sum_probs=90.2
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhh-CCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCce
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
+...++.+|||+|||+|..+..+++. +|+.+|+|+|+|+.+++.|+++.... ..++++.++|+.+ ++++++|
T Consensus 106 ~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-----~~~~~~f 180 (275)
T 1yb2_A 106 CGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-----FISDQMY 180 (275)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-----CCCSCCE
T ss_pred cCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-----cCcCCCc
Confidence 34467889999999999999999998 77889999999999999999986543 3579999999975 3456789
Q ss_pred eEEEE-----ccccccceeeecceEEecCCeEEEee----CHHHHHHHHHhCCCcEEEEEe
Q 009871 148 DIVTM-----ERLTGKDQKISENFYVRGDGTRAFYF----SNDFLTSLFKENGFDVEELGL 199 (523)
Q Consensus 148 D~V~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~l~~ll~~~Gf~~~~~~~ 199 (523)
|+|++ ..++....+ .++++|.+++.. ..+++.+.++++||..++...
T Consensus 181 D~Vi~~~~~~~~~l~~~~~-----~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 181 DAVIADIPDPWNHVQKIAS-----MMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp EEEEECCSCGGGSHHHHHH-----TEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEEEEE
T ss_pred cEEEEcCcCHHHHHHHHHH-----HcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEEEEE
Confidence 99999 122222222 577888776643 235677778889998776643
No 245
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.20 E-value=3.5e-11 Score=115.82 Aligned_cols=77 Identities=12% Similarity=-0.001 Sum_probs=64.1
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCCCcee
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
++...++.+|||||||+|..+..++.+.++++|+|+|+|++|++.|+++.... ..+++++++|+.++ ++++||
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l------~d~~FD 190 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI------DGLEFD 190 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG------GGCCCS
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC------CCCCcC
Confidence 45667899999999999988766666666899999999999999999976432 26899999999864 368899
Q ss_pred EEEE
Q 009871 149 IVTM 152 (523)
Q Consensus 149 ~V~~ 152 (523)
+|++
T Consensus 191 vV~~ 194 (298)
T 3fpf_A 191 VLMV 194 (298)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
No 246
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.20 E-value=1.2e-10 Score=117.41 Aligned_cols=132 Identities=10% Similarity=0.036 Sum_probs=102.7
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcCC-CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
..++.+|||+|||+|.++..++..++ .+++++|+ +.+++.+++|+..+++. .++.+...|+.+. + +
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~--------~-~ 247 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLS---DRVDVVEGDFFEP--------L-P 247 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCT---TTEEEEECCTTSC--------C-S
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCC---CceEEEeCCCCCC--------C-C
Confidence 44678999999999988888888753 48999999 99999999999987764 4688887777542 1 2
Q ss_pred CCccEEEEccccCCCCCh--HHHHHHHHHHhhccCCCCCCCCCcEEEEEEee-cC-----------------------CC
Q 009871 412 EGFEVILGTDVSYIPEAI--LPLFATAKELTASSNKSLREDQQPAFILCHIF-RQ-----------------------VD 465 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~--~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~-r~-----------------------~~ 465 (523)
..||+|+++.++++.... ..+++.+.++| +|||.+++.... .. .+
T Consensus 248 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L---------~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 318 (360)
T 1tw3_A 248 RKADAIILSFVLLNWPDHDAVRILTRCAEAL---------EPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRT 318 (360)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHTE---------EEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCB
T ss_pred CCccEEEEcccccCCCHHHHHHHHHHHHHhc---------CCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCC
Confidence 359999999999775544 58999999999 679999887544 10 13
Q ss_pred hhHHHHHHHHcCCEEEEEcCC
Q 009871 466 EPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 466 ~~~~~~~~~~~gf~~~~~~~~ 486 (523)
.+++.+.++++||++.+++..
T Consensus 319 ~~e~~~ll~~aGf~~~~~~~~ 339 (360)
T 1tw3_A 319 REKWDGLAASAGLVVEEVRQL 339 (360)
T ss_dssp HHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEEeC
Confidence 345677888999999988763
No 247
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.20 E-value=1.4e-10 Score=116.91 Aligned_cols=133 Identities=9% Similarity=0.160 Sum_probs=102.4
Q ss_pred CCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
...+|||||||+|.++..+++.. ..+|+++|+ +.+++.+++++...+.. .++.+...|..+... ++ +.+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~~~-----~~-p~~ 248 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGS---ERIHGHGANLLDRDV-----PF-PTG 248 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTG---GGEEEEECCCCSSSC-----CC-CCC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcc---cceEEEEccccccCC-----CC-CCC
Confidence 55799999999998888888864 448999999 99999999998876553 578888877665310 12 258
Q ss_pred ccEEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC----------------------------
Q 009871 414 FEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ---------------------------- 463 (523)
Q Consensus 414 fD~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~---------------------------- 463 (523)
||+|++..++++.. ....+++.+.+.| +|||.+++......
T Consensus 249 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L---------~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (363)
T 3dp7_A 249 FDAVWMSQFLDCFSEEEVISILTRVAQSI---------GKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKM 319 (363)
T ss_dssp CSEEEEESCSTTSCHHHHHHHHHHHHHHC---------CTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCEEEEechhhhCCHHHHHHHHHHHHHhc---------CCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcc
Confidence 99999999998654 3467899999999 77999988664321
Q ss_pred CChhHHHHHHHHcCCEEEEEcCC
Q 009871 464 VDEPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 464 ~~~~~~~~~~~~~gf~~~~~~~~ 486 (523)
.+..++.+.++++||++.+++..
T Consensus 320 ~t~~e~~~ll~~AGf~~v~~~~~ 342 (363)
T 3dp7_A 320 FHSDDLIRCIENAGLEVEEIQDN 342 (363)
T ss_dssp CCHHHHHHHHHTTTEEESCCCCC
T ss_pred cCHHHHHHHHHHcCCeEEEEEeC
Confidence 13456777888899999888753
No 248
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.19 E-value=6.8e-11 Score=106.59 Aligned_cols=123 Identities=14% Similarity=0.150 Sum_probs=87.0
Q ss_pred hhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCCce
Q 009871 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 69 ~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
+.+...++.+|||+|||+|.++..+++ ++.+|+|+|+|+.|++.|+++....+ .+++++++|+.+ ++++++|
T Consensus 29 ~~~~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~ 101 (183)
T 2yxd_A 29 GKLNLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-----VLDKLEF 101 (183)
T ss_dssp HHHCCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-----HGGGCCC
T ss_pred HHcCCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-----cccCCCC
Confidence 344446778999999999999999988 57889999999999999999764332 579999999875 2345789
Q ss_pred eEEEEcccccccee-eecceEEecCCeEEEee----CHHHHHHHHHhCCCcEEEEEeE
Q 009871 148 DIVTMERLTGKDQK-ISENFYVRGDGTRAFYF----SNDFLTSLFKENGFDVEELGLC 200 (523)
Q Consensus 148 D~V~~~~~~~~~~~-~~~~~~~~~~g~~~~~~----~~~~l~~ll~~~Gf~~~~~~~~ 200 (523)
|+|++... ..... +....-. ++|.+++.. ...++.+.++++||.+..+...
T Consensus 102 D~i~~~~~-~~~~~~l~~~~~~-~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 157 (183)
T 2yxd_A 102 NKAFIGGT-KNIEKIIEILDKK-KINHIVANTIVLENAAKIINEFESRGYNVDAVNVF 157 (183)
T ss_dssp SEEEECSC-SCHHHHHHHHHHT-TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cEEEECCc-ccHHHHHHHHhhC-CCCEEEEEecccccHHHHHHHHHHcCCeEEEEEee
Confidence 99998322 11111 1000011 677776543 3556888999999876655433
No 249
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.19 E-value=3.9e-10 Score=105.47 Aligned_cols=142 Identities=15% Similarity=0.116 Sum_probs=91.0
Q ss_pred HHHHHhcC---CCCCCCCeEEEECCCccHHHHHHHhc-C-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeec
Q 009871 323 MAAVLARN---PTIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEW 397 (523)
Q Consensus 323 la~~l~~~---~~~~~~~~VLElG~G~G~l~~~~a~~-~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw 397 (523)
++..+... ..+.+|.+|||||||+|..+..++.. + ..+|+++|+++.|++.+...+... .++.+...|-
T Consensus 61 la~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r------~nv~~i~~Da 134 (232)
T 3id6_C 61 LAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR------PNIFPLLADA 134 (232)
T ss_dssp HHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC------TTEEEEECCT
T ss_pred HHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc------CCeEEEEccc
Confidence 45555443 33668999999999999988888876 3 459999999999986665544432 2455554443
Q ss_pred CCCCcchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCC--------ChhHH
Q 009871 398 GNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQV--------DEPSM 469 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~--------~~~~~ 469 (523)
..... ...+ .++||+|++. +.. +.....+...+.++| +|||.++++...+.. .....
T Consensus 135 ~~~~~---~~~~-~~~~D~I~~d-~a~-~~~~~il~~~~~~~L---------kpGG~lvisik~~~~d~t~~~~e~~~~~ 199 (232)
T 3id6_C 135 RFPQS---YKSV-VENVDVLYVD-IAQ-PDQTDIAIYNAKFFL---------KVNGDMLLVIKARSIDVTKDPKEIYKTE 199 (232)
T ss_dssp TCGGG---TTTT-CCCEEEEEEC-CCC-TTHHHHHHHHHHHHE---------EEEEEEEEEEC-------CCSSSSTTHH
T ss_pred ccchh---hhcc-ccceEEEEec-CCC-hhHHHHHHHHHHHhC---------CCCeEEEEEEccCCcccCCCHHHHHHHH
Confidence 32211 1111 3589999985 322 333444556677799 679999987543321 11345
Q ss_pred HHHHHHcCCEEEEEcC
Q 009871 470 LSAATQCGFRLVDKWP 485 (523)
Q Consensus 470 ~~~~~~~gf~~~~~~~ 485 (523)
...++++||++.+...
T Consensus 200 ~~~L~~~gf~~~~~~~ 215 (232)
T 3id6_C 200 VEKLENSNFETIQIIN 215 (232)
T ss_dssp HHHHHHTTEEEEEEEE
T ss_pred HHHHHHCCCEEEEEec
Confidence 6777788999988765
No 250
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.19 E-value=1.8e-11 Score=115.55 Aligned_cols=121 Identities=17% Similarity=0.224 Sum_probs=83.3
Q ss_pred CCCCCeEEEECCCccccHHHHHhhC-CCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
..++.+|||+|||+|.++..+++.. ++.+|+|+|+|+.|++.+.+++... .+++++++|+.+... .++.+++||+|+
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~-~~~~~~~~D~V~ 152 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHK-YRMLIAMVDVIF 152 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGG-GGGGCCCEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhh-hcccCCcEEEEE
Confidence 3567899999999999999999984 6789999999998877766655333 679999999986320 134567999999
Q ss_pred Ecccccccee---ee-cceEEecCCeEEEeeCH--------------HHHHHHHHhCCCcEEEE
Q 009871 152 MERLTGKDQK---IS-ENFYVRGDGTRAFYFSN--------------DFLTSLFKENGFDVEEL 197 (523)
Q Consensus 152 ~~~~~~~~~~---~~-~~~~~~~~g~~~~~~~~--------------~~l~~ll~~~Gf~~~~~ 197 (523)
+.-. ..... +. -...++++|.++..... .+ .++|+++||++++.
T Consensus 153 ~~~~-~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gf~~~~~ 214 (233)
T 2ipx_A 153 ADVA-QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASE-VKKMQQENMKPQEQ 214 (233)
T ss_dssp ECCC-CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHH-HHTTGGGTEEEEEE
T ss_pred EcCC-CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHH-HHHHHHCCCceEEE
Confidence 9111 11100 11 11257777776653221 12 57788899998764
No 251
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.19 E-value=1.1e-10 Score=117.93 Aligned_cols=122 Identities=14% Similarity=0.183 Sum_probs=88.2
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCcee
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
++..+..+|||||||+|..+..+++.+|+.+++++|+ +.+++.|+++.... ..++++..+|+. . +++. .||
T Consensus 198 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~----~~p~-~~D 270 (369)
T 3gwz_A 198 YDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-E----TIPD-GAD 270 (369)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-T----CCCS-SCS
T ss_pred CCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-C----CCCC-Cce
Confidence 3445678999999999999999999999999999999 99999999875432 367999999997 3 4455 799
Q ss_pred EEEE-------------------ccccccceeeecceEEecCCeE---------------EEeeCHHHHHHHHHhCCCcE
Q 009871 149 IVTM-------------------ERLTGKDQKISENFYVRGDGTR---------------AFYFSNDFLTSLFKENGFDV 194 (523)
Q Consensus 149 ~V~~-------------------~~~~~~~~~~~~~~~~~~~g~~---------------~~~~~~~~l~~ll~~~Gf~~ 194 (523)
+|++ .+.+++++++.-.....++... -..++.+++.++|+++||++
T Consensus 271 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~ 350 (369)
T 3gwz_A 271 VYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRV 350 (369)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEE
T ss_pred EEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeE
Confidence 9999 2223333333211111111100 01257899999999999999
Q ss_pred EEEEe
Q 009871 195 EELGL 199 (523)
Q Consensus 195 ~~~~~ 199 (523)
+++..
T Consensus 351 ~~~~~ 355 (369)
T 3gwz_A 351 ERSLP 355 (369)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87743
No 252
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.19 E-value=8.7e-11 Score=108.76 Aligned_cols=104 Identities=13% Similarity=0.014 Sum_probs=81.0
Q ss_pred CCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc
Q 009871 331 PTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 410 (523)
Q Consensus 331 ~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~ 410 (523)
....++.+|||+|||+|.++..++.. ..+|+++|+++.+++.+++|+..++.. ++.+...|+.+.. ..
T Consensus 73 l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~----~v~~~~~d~~~~~-------~~ 140 (210)
T 3lbf_A 73 LELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH----NVSTRHGDGWQGW-------QA 140 (210)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC----SEEEEESCGGGCC-------GG
T ss_pred cCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC----ceEEEECCcccCC-------cc
Confidence 34457889999999999888888887 568999999999999999999987653 4677766654421 12
Q ss_pred CCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 411 NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 411 ~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
.++||+|+++.++.+... .+.++| +|||.+++....
T Consensus 141 ~~~~D~i~~~~~~~~~~~------~~~~~L---------~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 RAPFDAIIVTAAPPEIPT------ALMTQL---------DEGGILVLPVGE 176 (210)
T ss_dssp GCCEEEEEESSBCSSCCT------HHHHTE---------EEEEEEEEEECS
T ss_pred CCCccEEEEccchhhhhH------HHHHhc---------ccCcEEEEEEcC
Confidence 468999999877765432 577888 679999887755
No 253
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.19 E-value=2.7e-11 Score=122.26 Aligned_cols=75 Identities=19% Similarity=0.291 Sum_probs=63.3
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
....+|||||||+|..+..+++++|+.+|+++|+ +.|++.|+++....+ .+++++.+|+.+..+ |++ ++||+|+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~p-~~~D~v~ 253 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDV--PFP-TGFDAVW 253 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSC--CCC-CCCSEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCC--CCC-CCcCEEE
Confidence 4668999999999999999999999999999999 999999999764332 579999999986421 233 6899999
Q ss_pred E
Q 009871 152 M 152 (523)
Q Consensus 152 ~ 152 (523)
+
T Consensus 254 ~ 254 (363)
T 3dp7_A 254 M 254 (363)
T ss_dssp E
T ss_pred E
Confidence 9
No 254
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.18 E-value=4.6e-11 Score=114.22 Aligned_cols=119 Identities=19% Similarity=0.214 Sum_probs=91.5
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhh-CCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCc
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSS 146 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~ 146 (523)
.+...++.+|||+|||+|.++..+++. +|+.+|+|+|+|+.+++.|+++.... ..++++.++|+.+ ++++++
T Consensus 88 ~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~~~~~ 162 (255)
T 3mb5_A 88 YAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE-----GIEEEN 162 (255)
T ss_dssp HTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG-----CCCCCS
T ss_pred hhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh-----ccCCCC
Confidence 445567889999999999999999999 88899999999999999999986432 2459999999984 356788
Q ss_pred eeEEEE-----ccccccceeeecceEEecCCeEEEee----CHHHHHHHHHhCC--CcEEEEE
Q 009871 147 IDIVTM-----ERLTGKDQKISENFYVRGDGTRAFYF----SNDFLTSLFKENG--FDVEELG 198 (523)
Q Consensus 147 fD~V~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~l~~ll~~~G--f~~~~~~ 198 (523)
||+|++ ..++....+ .++++|.++.+. ..+++.+.+++.| |..+++.
T Consensus 163 ~D~v~~~~~~~~~~l~~~~~-----~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 163 VDHVILDLPQPERVVEHAAK-----ALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp EEEEEECSSCGGGGHHHHHH-----HEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEEE
T ss_pred cCEEEECCCCHHHHHHHHHH-----HcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEEE
Confidence 999999 112222222 577888877643 3456788889999 9866553
No 255
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.18 E-value=1.5e-11 Score=116.52 Aligned_cols=72 Identities=18% Similarity=0.257 Sum_probs=62.5
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++....+ .+++++++|+.+. + ++++||+|+
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~-~~~~~D~v~ 149 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLL----A-SFLKADVVF 149 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH----G-GGCCCSEEE
T ss_pred cCCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHh----c-ccCCCCEEE
Confidence 36889999999999999999988 4789999999999999999875444 4799999999865 2 467999999
Q ss_pred E
Q 009871 152 M 152 (523)
Q Consensus 152 ~ 152 (523)
+
T Consensus 150 ~ 150 (241)
T 3gdh_A 150 L 150 (241)
T ss_dssp E
T ss_pred E
Confidence 9
No 256
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.18 E-value=2.2e-11 Score=114.67 Aligned_cols=145 Identities=18% Similarity=0.160 Sum_probs=94.6
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeec
Q 009871 318 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEW 397 (523)
Q Consensus 318 ~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw 397 (523)
.++..|.+.|.......++++|||||||+|.++..+++.++.+|+++|+|+.|++.++++....... ... ...+
T Consensus 20 rg~~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~---~~~---~~~~ 93 (232)
T 3opn_A 20 RGGLKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVM---EQF---NFRN 93 (232)
T ss_dssp TTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEE---CSC---CGGG
T ss_pred CcHHHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcccccc---ccc---eEEE
Confidence 4455677777666555578899999999999998898888779999999999999877643221100 000 0011
Q ss_pred CCCCcchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec---------------
Q 009871 398 GNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR--------------- 462 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r--------------- 462 (523)
...+ .+....||.+.. |+++.. +..+++.+.++| +|||.+++.....
T Consensus 94 ~~~~------~~~~~~~d~~~~-D~v~~~--l~~~l~~i~rvL---------kpgG~lv~~~~p~~e~~~~~~~~~G~~~ 155 (232)
T 3opn_A 94 AVLA------DFEQGRPSFTSI-DVSFIS--LDLILPPLYEIL---------EKNGEVAALIKPQFEAGREQVGKNGIIR 155 (232)
T ss_dssp CCGG------GCCSCCCSEEEE-CCSSSC--GGGTHHHHHHHS---------CTTCEEEEEECHHHHSCHHHHC-CCCCC
T ss_pred eCHh------HcCcCCCCEEEE-EEEhhh--HHHHHHHHHHhc---------cCCCEEEEEECcccccCHHHhCcCCeec
Confidence 1101 111223566543 444432 488999999999 7899998863210
Q ss_pred -----CCChhHHHHHHHHcCCEEEEEcCC
Q 009871 463 -----QVDEPSMLSAATQCGFRLVDKWPS 486 (523)
Q Consensus 463 -----~~~~~~~~~~~~~~gf~~~~~~~~ 486 (523)
......+.+.+++.||++..+...
T Consensus 156 d~~~~~~~~~~l~~~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 156 DPKVHQMTIEKVLKTATQLGFSVKGLTFS 184 (232)
T ss_dssp CHHHHHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred CcchhHHHHHHHHHHHHHCCCEEEEEEEc
Confidence 012245677888999999888654
No 257
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.18 E-value=1.7e-10 Score=114.92 Aligned_cols=128 Identities=11% Similarity=0.095 Sum_probs=100.1
Q ss_pred CeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCcc
Q 009871 337 KKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFE 415 (523)
Q Consensus 337 ~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD 415 (523)
.+|||+|||+|.++..++... ..+++++|+ +.+++.+++++..+++. .++.+...|+.+. + +.+||
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~--------~-~~~~D 235 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAG---ERVSLVGGDMLQE--------V-PSNGD 235 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHT---TSEEEEESCTTTC--------C-CSSCS
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCC---CcEEEecCCCCCC--------C-CCCCC
Confidence 899999999998888888774 458999999 99999999998776543 4678877766542 1 35799
Q ss_pred EEEEccccCCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-----------------------CChhHHH
Q 009871 416 VILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-----------------------VDEPSML 470 (523)
Q Consensus 416 ~Ii~~d~~y~~~~--~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-----------------------~~~~~~~ 470 (523)
+|++..++++... ...+++.+.++| +|||.+++...... .+..++.
T Consensus 236 ~v~~~~vl~~~~~~~~~~~l~~~~~~L---------~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 306 (334)
T 2ip2_A 236 IYLLSRIIGDLDEAASLRLLGNCREAM---------AGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVV 306 (334)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHS---------CTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHH
T ss_pred EEEEchhccCCCHHHHHHHHHHHHHhc---------CCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHH
Confidence 9999999976544 348999999999 77999998854321 1345667
Q ss_pred HHHHHcCCEEEEEcCC
Q 009871 471 SAATQCGFRLVDKWPS 486 (523)
Q Consensus 471 ~~~~~~gf~~~~~~~~ 486 (523)
+.+++.||++.+++..
T Consensus 307 ~ll~~aGf~~~~~~~~ 322 (334)
T 2ip2_A 307 DLLGRGGFAVERIVDL 322 (334)
T ss_dssp HHHHHTTEEEEEEEEE
T ss_pred HHHHHCCCceeEEEEC
Confidence 7888999999988763
No 258
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.17 E-value=1.7e-11 Score=126.13 Aligned_cols=120 Identities=12% Similarity=0.079 Sum_probs=80.6
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeE
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDI 149 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 149 (523)
.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++... .....+...+...+ ++++++||+
T Consensus 102 ~~~~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~~~~~~l----~~~~~~fD~ 174 (416)
T 4e2x_A 102 TELTGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREKGIR-VRTDFFEKATADDV----RRTEGPANV 174 (416)
T ss_dssp TTTCSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTTTCC-EECSCCSHHHHHHH----HHHHCCEEE
T ss_pred HhCCCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHcCCC-cceeeechhhHhhc----ccCCCCEEE
Confidence 344457889999999999999999987 55799999999999999987210 00001222333333 455789999
Q ss_pred EEE-----------------ccccccceeeecceEEecC--------------CeEEEeeCHHHHHHHHHhCCCcEEEEE
Q 009871 150 VTM-----------------ERLTGKDQKISENFYVRGD--------------GTRAFYFSNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 150 V~~-----------------~~~~~~~~~~~~~~~~~~~--------------g~~~~~~~~~~l~~ll~~~Gf~~~~~~ 198 (523)
|++ .+.+++++.+. +..+. .....+++.+++.++++++||+++.+.
T Consensus 175 I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~---i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~ 251 (416)
T 4e2x_A 175 IYAANTLCHIPYVQSVLEGVDALLAPDGVFV---FEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQ 251 (416)
T ss_dssp EEEESCGGGCTTHHHHHHHHHHHEEEEEEEE---EEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEE
T ss_pred EEECChHHhcCCHHHHHHHHHHHcCCCeEEE---EEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEE
Confidence 999 23334443332 11110 112235689999999999999988775
Q ss_pred e
Q 009871 199 L 199 (523)
Q Consensus 199 ~ 199 (523)
.
T Consensus 252 ~ 252 (416)
T 4e2x_A 252 R 252 (416)
T ss_dssp E
T ss_pred E
Confidence 4
No 259
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.17 E-value=1.3e-10 Score=111.48 Aligned_cols=129 Identities=12% Similarity=0.146 Sum_probs=88.6
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc---CC--CcEEEEEeeccCCcc---CCC
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF---TE--TRVSTFVCDLISDDL---SRQ 141 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~---~~--~~v~~~~~d~~~~~~---~~~ 141 (523)
+++..++.+|||+|||+|.++..+++++|+.+|+|+|+++.|++.|+++... .+ .+++++++|+.+... ..+
T Consensus 31 ~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~ 110 (260)
T 2ozv_A 31 LVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAG 110 (260)
T ss_dssp TCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTT
T ss_pred HhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhc
Confidence 3344567899999999999999999998888999999999999999998754 33 359999999986410 012
Q ss_pred CCCCceeEEEEc-cccccce-----------------eeec-----ceEEecCCeEEEeeCH---HHHHHHHHhCCCcEE
Q 009871 142 ISPSSIDIVTME-RLTGKDQ-----------------KISE-----NFYVRGDGTRAFYFSN---DFLTSLFKENGFDVE 195 (523)
Q Consensus 142 ~~~~~fD~V~~~-~~~~~~~-----------------~~~~-----~~~~~~~g~~~~~~~~---~~l~~ll~~~Gf~~~ 195 (523)
+++++||+|++. .+..... .+.. ...++++|.+.+.+.. .++.+.+++. |...
T Consensus 111 ~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~~ 189 (260)
T 2ozv_A 111 LPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGGL 189 (260)
T ss_dssp CCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEEE
T ss_pred cCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCce
Confidence 457899999992 2211100 0000 1257888988776543 4566666653 6655
Q ss_pred EEEe
Q 009871 196 ELGL 199 (523)
Q Consensus 196 ~~~~ 199 (523)
.+..
T Consensus 190 ~i~~ 193 (260)
T 2ozv_A 190 EITL 193 (260)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 260
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.17 E-value=1.1e-10 Score=104.44 Aligned_cols=107 Identities=20% Similarity=0.230 Sum_probs=79.5
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE-
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM- 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~- 152 (523)
.++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. ..+++++++|+.+ ++++++||+|++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~--------~~~~~~~~~d~~~-----~~~~~~fD~i~~n 85 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES--------HRGGNLVRADLLC-----SINQESVDVVVFN 85 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT--------CSSSCEEECSTTT-----TBCGGGCSEEEEC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc--------ccCCeEEECChhh-----hcccCCCCEEEEC
Confidence 456799999999999999999885 79999999999988 2468899999975 345589999999
Q ss_pred ccccc---c--------c----eeeecceEEecCCeEEEe----eCHHHHHHHHHhCCCcEEEEEe
Q 009871 153 ERLTG---K--------D----QKISENFYVRGDGTRAFY----FSNDFLTSLFKENGFDVEELGL 199 (523)
Q Consensus 153 ~~~~~---~--------~----~~~~~~~~~~~~g~~~~~----~~~~~l~~ll~~~Gf~~~~~~~ 199 (523)
..+.. . . ..+.. .+ ++|.+.+. ...+++.++++++||....+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 86 PPYVPDTDDPIIGGGYLGREVIDRFVD--AV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp CCCBTTCCCTTTBCCGGGCHHHHHHHH--HC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCccCCccccccCCcchHHHHHHHHh--hC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEe
Confidence 11110 0 0 11111 12 77877653 3678999999999999766543
No 261
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.17 E-value=2.1e-10 Score=102.57 Aligned_cols=141 Identities=11% Similarity=0.119 Sum_probs=96.7
Q ss_pred hHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhc-CC-CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeee
Q 009871 319 SAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAG-SA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 396 (523)
Q Consensus 319 ~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~-~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ld 396 (523)
+...+.+++.......++.+|||+|||+|.++..++.. ++ .+|+++|+++ +++. .++.+...|
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------~~~~~~~~d 70 (180)
T 1ej0_A 6 AWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------VGVDFLQGD 70 (180)
T ss_dssp HHHHHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------------TTEEEEESC
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------------CcEEEEEcc
Confidence 34445565555444557889999999999888888887 44 6999999998 6532 345666665
Q ss_pred cCCCCcchhhhh-hcCCCccEEEEccccCCCCCh-----------HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCC
Q 009871 397 WGNRDHIEAIKE-ENNEGFEVILGTDVSYIPEAI-----------LPLFATAKELTASSNKSLREDQQPAFILCHIFRQV 464 (523)
Q Consensus 397 w~~~~~~~~~~~-~~~~~fD~Ii~~d~~y~~~~~-----------~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~ 464 (523)
+.+......+.. +++++||+|+++.+++..... ..+++.+.++| +|+|.+++.... ..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L---------~~gG~l~~~~~~-~~ 140 (180)
T 1ej0_A 71 FRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVL---------APGGSFVVKVFQ-GE 140 (180)
T ss_dssp TTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHE---------EEEEEEEEEEES-ST
T ss_pred cccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHc---------CCCcEEEEEEec-CC
Confidence 544211111111 445789999998887766555 78899999999 679999886654 34
Q ss_pred ChhHHHHHHHHcCCEEEEEcC
Q 009871 465 DEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 465 ~~~~~~~~~~~~gf~~~~~~~ 485 (523)
....+.+.+.+. |....+..
T Consensus 141 ~~~~~~~~~~~~-~~~~~~~~ 160 (180)
T 1ej0_A 141 GFDEYLREIRSL-FTKVKVRK 160 (180)
T ss_dssp THHHHHHHHHHH-EEEEEEEC
T ss_pred cHHHHHHHHHHh-hhhEEeec
Confidence 455677777775 77666654
No 262
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.17 E-value=1.5e-10 Score=115.31 Aligned_cols=119 Identities=13% Similarity=0.213 Sum_probs=84.9
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
.++.+|||||||+|..+..+++.+|+.+|+|+|+| .|++.|+++.... ..+++++++|+.+. +++++ ||+|+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~-~D~v~ 237 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV----DYGND-YDLVL 237 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS----CCCSC-EEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC----CCCCC-CcEEE
Confidence 56789999999999999999999988999999999 9999999875332 24699999999865 34444 99999
Q ss_pred E-------------------ccccccceeeecceEEecCC-e-----------------EEEeeCHHHHHHHHHhCCCcE
Q 009871 152 M-------------------ERLTGKDQKISENFYVRGDG-T-----------------RAFYFSNDFLTSLFKENGFDV 194 (523)
Q Consensus 152 ~-------------------~~~~~~~~~~~~~~~~~~~g-~-----------------~~~~~~~~~l~~ll~~~Gf~~ 194 (523)
+ .+.+++++.+.-.....++. . ....++.+++.++++++||..
T Consensus 238 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~ 317 (335)
T 2r3s_A 238 LPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSH 317 (335)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSE
T ss_pred EcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCe
Confidence 9 11122333221100001100 0 012347899999999999998
Q ss_pred EEEE
Q 009871 195 EELG 198 (523)
Q Consensus 195 ~~~~ 198 (523)
+++.
T Consensus 318 ~~~~ 321 (335)
T 2r3s_A 318 SQLH 321 (335)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 8764
No 263
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.17 E-value=2.3e-10 Score=114.90 Aligned_cols=133 Identities=13% Similarity=0.092 Sum_probs=103.2
Q ss_pred CCCC-CCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhh
Q 009871 332 TIVA-GKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE 409 (523)
Q Consensus 332 ~~~~-~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~ 409 (523)
...+ +.+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++++..++.. .++.+...|+.+.. ..
T Consensus 175 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~~------~~ 244 (352)
T 3mcz_A 175 GVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLG---GRVEFFEKNLLDAR------NF 244 (352)
T ss_dssp GGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCG---GGEEEEECCTTCGG------GG
T ss_pred CCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCC---CceEEEeCCcccCc------cc
Confidence 3445 7899999999999888888875 358999999 88999999999887654 56888887766531 11
Q ss_pred cCCCccEEEEccccCCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-------------------------
Q 009871 410 NNEGFEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFR------------------------- 462 (523)
Q Consensus 410 ~~~~fD~Ii~~d~~y~~~~--~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r------------------------- 462 (523)
.+..||+|++..++++... ...+++.+.+.| +|||.+++.....
T Consensus 245 ~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L---------~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (352)
T 3mcz_A 245 EGGAADVVMLNDCLHYFDAREAREVIGHAAGLV---------KPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGE 315 (352)
T ss_dssp TTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTE---------EEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCC
T ss_pred CCCCccEEEEecccccCCHHHHHHHHHHHHHHc---------CCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCC
Confidence 2457999999999987653 588999999999 6799998876421
Q ss_pred CCChhHHHHHHHHcCCEEEEE
Q 009871 463 QVDEPSMLSAATQCGFRLVDK 483 (523)
Q Consensus 463 ~~~~~~~~~~~~~~gf~~~~~ 483 (523)
..+..++.+.+++.||++.+.
T Consensus 316 ~~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 316 LHPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp CCCHHHHHHHHHHTTCEEEEE
T ss_pred cCCHHHHHHHHHHCCCceeee
Confidence 123456778889999999874
No 264
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.16 E-value=5.2e-11 Score=110.42 Aligned_cols=116 Identities=15% Similarity=0.189 Sum_probs=87.9
Q ss_pred HHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCC
Q 009871 322 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 401 (523)
Q Consensus 322 ~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~ 401 (523)
.+.+++.... .++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++++.. ..++.+...|..+.
T Consensus 31 ~~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~------~~~i~~~~~d~~~~- 101 (215)
T 2pxx_A 31 SFRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH------VPQLRWETMDVRKL- 101 (215)
T ss_dssp HHHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT------CTTCEEEECCTTSC-
T ss_pred HHHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc------CCCcEEEEcchhcC-
Confidence 3566666543 46789999999999988888888766899999999999999988653 13566666655432
Q ss_pred cchhhhhhcCCCccEEEEccccCC---------------CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 402 HIEAIKEENNEGFEVILGTDVSYI---------------PEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 402 ~~~~~~~~~~~~fD~Ii~~d~~y~---------------~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
++.+++||+|+++.++.. ......+++.+.++| +|||.+++....
T Consensus 102 ------~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~li~~~~~ 161 (215)
T 2pxx_A 102 ------DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVL---------VPGGRFISMTSA 161 (215)
T ss_dssp ------CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHE---------EEEEEEEEEESC
T ss_pred ------CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhC---------cCCCEEEEEeCC
Confidence 234568999999876532 224578899999999 679999887654
No 265
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.16 E-value=5.3e-11 Score=118.59 Aligned_cols=119 Identities=19% Similarity=0.140 Sum_probs=85.5
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
.+..+|||||||+|..+..+++.+|+.+++++|+ +.|++.|+++.... ..++++..+|+. . +++. +||+|+
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~----~~p~-~~D~v~ 240 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-D----PLPA-GAGGYV 240 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-S----CCCC-SCSEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-C----CCCC-CCcEEE
Confidence 4568999999999999999999999999999999 99999999875432 367999999997 3 3444 799999
Q ss_pred E-------------------ccccccceeeecceEEecCCeE-------------EEeeCHHHHHHHHHhCCCcEEEEEe
Q 009871 152 M-------------------ERLTGKDQKISENFYVRGDGTR-------------AFYFSNDFLTSLFKENGFDVEELGL 199 (523)
Q Consensus 152 ~-------------------~~~~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~l~~ll~~~Gf~~~~~~~ 199 (523)
+ .+.+++++++.-.....++... ...++.+++.++++++||+++++..
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 320 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHP 320 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 9 2222333333211011111000 0124789999999999999887753
No 266
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.16 E-value=1e-10 Score=107.96 Aligned_cols=121 Identities=10% Similarity=0.066 Sum_probs=91.3
Q ss_pred CCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
++.+|||+|||+|.++..++.. ...+|+++|+++.+++.+++|+..++.. .+.+...|+.+.. +.++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~v~~~~~d~~~~~--------~~~~ 132 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE----NIEPVQSRVEEFP--------SEPP 132 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS----SEEEEECCTTTSC--------CCSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----CeEEEecchhhCC--------ccCC
Confidence 5789999999999888888876 3569999999999999999999987663 3777777765431 2358
Q ss_pred ccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEc
Q 009871 414 FEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 484 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~ 484 (523)
||+|++..+ .....+++.+.++| +|||.+++..... ..+.+.+... ||++.++.
T Consensus 133 ~D~i~~~~~----~~~~~~l~~~~~~L---------~~gG~l~~~~~~~--~~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 133 FDGVISRAF----ASLNDMVSWCHHLP---------GEQGRFYALKGQM--PEDEIALLPE--EYQVESVV 186 (207)
T ss_dssp EEEEECSCS----SSHHHHHHHHTTSE---------EEEEEEEEEESSC--CHHHHHTSCT--TEEEEEEE
T ss_pred cCEEEEecc----CCHHHHHHHHHHhc---------CCCcEEEEEeCCC--chHHHHHHhc--CCceeeee
Confidence 999997642 56788999999999 6799998875432 2333333332 89887753
No 267
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.15 E-value=8.6e-10 Score=111.45 Aligned_cols=126 Identities=13% Similarity=0.135 Sum_probs=90.3
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcCCC-EEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGSAD-LVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~~~-~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
..++.+|||+|||+|.++..++..+.. +|+++|+|+.|++.|+.|+..+++. ..+.+...|..+. +.+.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~---~~i~~~~~D~~~~-------~~~~ 284 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVL---DKIKFIQGDATQL-------SQYV 284 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCG---GGCEEEECCGGGG-------GGTC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCC---CceEEEECChhhC-------Cccc
Confidence 347889999999999998888887653 8999999999999999999998874 4567766555432 2234
Q ss_pred CCccEEEEccccCCCC-----C----hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEE
Q 009871 412 EGFEVILGTDVSYIPE-----A----ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVD 482 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~-----~----~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~ 482 (523)
++||+|+++.. |... . +..+++.++++| +|.+++... +...+.+.+.+.||++.+
T Consensus 285 ~~fD~Ii~npP-yg~r~~~~~~~~~ly~~~~~~l~r~l-----------~g~~~~i~~----~~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 285 DSVDFAISNLP-YGLKIGKKSMIPDLYMKFFNELAKVL-----------EKRGVFITT----EKKAIEEAIAENGFEIIH 348 (373)
T ss_dssp SCEEEEEEECC-CC------CCHHHHHHHHHHHHHHHE-----------EEEEEEEES----CHHHHHHHHHHTTEEEEE
T ss_pred CCcCEEEECCC-CCcccCcchhHHHHHHHHHHHHHHHc-----------CCeEEEEEC----CHHHHHHHHHHcCCEEEE
Confidence 68999999654 3321 2 356677777777 344433322 234566777889999877
Q ss_pred Ec
Q 009871 483 KW 484 (523)
Q Consensus 483 ~~ 484 (523)
..
T Consensus 349 ~~ 350 (373)
T 3tm4_A 349 HR 350 (373)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 268
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.15 E-value=1.1e-10 Score=113.11 Aligned_cols=118 Identities=17% Similarity=0.116 Sum_probs=89.3
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhh-CCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCce
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
+...++.+|||+|||+|.++..+++. +|+.+|+|+|+|+.+++.|+++....+ .++++.++|+.+. +++++|
T Consensus 108 ~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~ 182 (277)
T 1o54_A 108 LDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-----FDEKDV 182 (277)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-----CSCCSE
T ss_pred hCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-----ccCCcc
Confidence 34456789999999999999999998 678899999999999999999764333 4799999999754 456789
Q ss_pred eEEEE-----ccccccceeeecceEEecCCeEEEeeC----HHHHHHHHHhCCCcEEEEE
Q 009871 148 DIVTM-----ERLTGKDQKISENFYVRGDGTRAFYFS----NDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 148 D~V~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~l~~ll~~~Gf~~~~~~ 198 (523)
|+|++ ..++....+ .++++|.+++... ..++.+.+++.||..++..
T Consensus 183 D~V~~~~~~~~~~l~~~~~-----~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 183 DALFLDVPDPWNYIDKCWE-----ALKGGGRFATVCPTTNQVQETLKKLQELPFIRIEVW 237 (277)
T ss_dssp EEEEECCSCGGGTHHHHHH-----HEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEEEE
T ss_pred CEEEECCcCHHHHHHHHHH-----HcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeEEE
Confidence 99999 122222222 5778887776542 3466778888999876554
No 269
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.15 E-value=1.4e-10 Score=108.57 Aligned_cols=124 Identities=14% Similarity=0.181 Sum_probs=81.8
Q ss_pred CCCCCeEEEECCCccccHHHHHhh-CCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
..++.+|||+|||+|..+..+++. .+.++|+|+|+|+.|++...+.+.. ..++.++++|+....... ...++||+|+
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-r~nv~~i~~Da~~~~~~~-~~~~~~D~I~ 151 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-RPNIFPLLADARFPQSYK-SVVENVDVLY 151 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-CTTEEEEECCTTCGGGTT-TTCCCEEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-cCCeEEEEcccccchhhh-ccccceEEEE
Confidence 567899999999999999999987 5678999999999987544332211 157999999998642211 1246899999
Q ss_pred E-ccccccceeeec--ceEEecCCeEEEee-------------CHHHHHHHHHhCCCcEEEEE
Q 009871 152 M-ERLTGKDQKISE--NFYVRGDGTRAFYF-------------SNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 152 ~-~~~~~~~~~~~~--~~~~~~~g~~~~~~-------------~~~~l~~ll~~~Gf~~~~~~ 198 (523)
+ .........+.. ..+++++|.+++.. ..++....|+++||++.+..
T Consensus 152 ~d~a~~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~ 214 (232)
T 3id6_C 152 VDIAQPDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQII 214 (232)
T ss_dssp ECCCCTTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEE
T ss_pred ecCCChhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEe
Confidence 9 111000001111 11477777776531 11455677788899987654
No 270
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.15 E-value=8.6e-11 Score=118.80 Aligned_cols=121 Identities=12% Similarity=0.077 Sum_probs=86.8
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
..++.+|||+|||+|.++..++..++..+|+|+|+|+.|++.|+++....+ .++++.++|+.++ ++++++||+|
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~----~~~~~~fD~I 290 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL----SQYVDSVDFA 290 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG----GGTCSCEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC----CcccCCcCEE
Confidence 457889999999999999999998765579999999999999999875443 4799999999977 5567899999
Q ss_pred EE-----ccccccc------eeeec--ceEEecCCeEEEeeCHHHHHHHHHhCCCcEEEEE
Q 009871 151 TM-----ERLTGKD------QKISE--NFYVRGDGTRAFYFSNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 151 ~~-----~~~~~~~------~~~~~--~~~~~~~g~~~~~~~~~~l~~ll~~~Gf~~~~~~ 198 (523)
++ .++.... ..+.. ...+ +++..+...+.+.+.+.+.+.||...+..
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~~~~~~~~~~~~~~G~~~~~~~ 350 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFITTEKKAIEEAIAENGFEIIHHR 350 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEESCHHHHHHHHHHTTEEEEEEE
T ss_pred EECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHHHcCCEEEEEE
Confidence 99 1110000 00000 0012 22233334478889999999999976553
No 271
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.15 E-value=3.1e-10 Score=107.79 Aligned_cols=128 Identities=10% Similarity=0.054 Sum_probs=94.4
Q ss_pred CCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc
Q 009871 331 PTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 410 (523)
Q Consensus 331 ~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~ 410 (523)
....++.+|||+|||+|.++..+++. ..+|+++|+++.+++.+++|+..+++. .++.+...|+.+.. ..
T Consensus 87 ~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~~~-------~~ 155 (248)
T 2yvl_A 87 LNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLG---KNVKFFNVDFKDAE-------VP 155 (248)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCC---TTEEEECSCTTTSC-------CC
T ss_pred cCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC---CcEEEEEcChhhcc-------cC
Confidence 34557889999999999888888887 679999999999999999999887653 35666665554321 12
Q ss_pred CCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEcC
Q 009871 411 NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 411 ~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
..+||+|+++ ......+++.+.++| +|+|.+++..... .....+.+.+++. |...+.+.
T Consensus 156 ~~~~D~v~~~-----~~~~~~~l~~~~~~L---------~~gG~l~~~~~~~-~~~~~~~~~l~~~-f~~~~~~~ 214 (248)
T 2yvl_A 156 EGIFHAAFVD-----VREPWHYLEKVHKSL---------MEGAPVGFLLPTA-NQVIKLLESIENY-FGNLEVVE 214 (248)
T ss_dssp TTCBSEEEEC-----SSCGGGGHHHHHHHB---------CTTCEEEEEESSH-HHHHHHHHHSTTT-EEEEEEEE
T ss_pred CCcccEEEEC-----CcCHHHHHHHHHHHc---------CCCCEEEEEeCCH-HHHHHHHHHHHhh-CCcceEEE
Confidence 4589999984 335668899999999 7799999887542 1223455556556 77655544
No 272
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.15 E-value=2.9e-10 Score=112.13 Aligned_cols=141 Identities=18% Similarity=0.091 Sum_probs=96.0
Q ss_pred hHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeee
Q 009871 319 SAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 396 (523)
Q Consensus 319 ~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ld 396 (523)
++.+++..+. ..++.+|||+|||+|+.+..++... ..+|+++|+++.+++.+++|+..+++. ++.+...|
T Consensus 106 ~s~l~~~~l~----~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~----~v~~~~~D 177 (315)
T 1ixk_A 106 SSMYPPVALD----PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL----NVILFHSS 177 (315)
T ss_dssp HHHHHHHHHC----CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC----SEEEESSC
T ss_pred HHHHHHHHhC----CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC----eEEEEECC
Confidence 4455555552 3467899999999999998888763 368999999999999999999998763 45655444
Q ss_pred cCCCCcchhhhhhcCCCccEEEEcccc------CC-CCC---------------hHHHHHHHHHHhhccCCCCCCCCCcE
Q 009871 397 WGNRDHIEAIKEENNEGFEVILGTDVS------YI-PEA---------------ILPLFATAKELTASSNKSLREDQQPA 454 (523)
Q Consensus 397 w~~~~~~~~~~~~~~~~fD~Ii~~d~~------y~-~~~---------------~~~l~~~l~~ll~~~~~~~~~~~~g~ 454 (523)
..+. . . ..++||+|++.... .. ++. ...+++.+.++| +|||.
T Consensus 178 ~~~~---~---~-~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~L---------kpGG~ 241 (315)
T 1ixk_A 178 SLHI---G---E-LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVL---------KPGGI 241 (315)
T ss_dssp GGGG---G---G-GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHE---------EEEEE
T ss_pred hhhc---c---c-ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhC---------CCCCE
Confidence 3221 1 1 24689999984221 11 110 157888899999 67999
Q ss_pred EEEEEeecC--CChhHHHHHHHHcCCEEEEE
Q 009871 455 FILCHIFRQ--VDEPSMLSAATQCGFRLVDK 483 (523)
Q Consensus 455 ~~l~~~~r~--~~~~~~~~~~~~~gf~~~~~ 483 (523)
++++...-. ..+..+...+++.||++..+
T Consensus 242 lv~stcs~~~~Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 242 LVYSTCSLEPEENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp EEEEESCCCGGGTHHHHHHHHHHSSEEEECC
T ss_pred EEEEeCCCChHHhHHHHHHHHhcCCCEEecC
Confidence 988654322 22333445567889887654
No 273
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.15 E-value=1e-10 Score=117.06 Aligned_cols=104 Identities=18% Similarity=0.108 Sum_probs=80.9
Q ss_pred CCCeEEEECCCccHHHHHHHhcCC-CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
++.+|||||||+|.++..++..++ .+|+++|+|+.+++.+++|+..|+.. +.+...|..+ ..+++
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~-----~~~~~~d~~~---------~~~~~ 261 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE-----GEVFASNVFS---------EVKGR 261 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC-----CEEEECSTTT---------TCCSC
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-----CEEEEccccc---------cccCC
Confidence 466999999999999988888875 48999999999999999999988764 2333322221 12468
Q ss_pred ccEEEEccccCC-----CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 414 FEVILGTDVSYI-----PEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 414 fD~Ii~~d~~y~-----~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
||+|+++.++++ ......+++.+.++| +|||.+++....
T Consensus 262 fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~L---------kpgG~l~i~~~~ 305 (343)
T 2pjd_A 262 FDMIISNPPFHDGMQTSLDAAQTLIRGAVRHL---------NSGGELRIVANA 305 (343)
T ss_dssp EEEEEECCCCCSSSHHHHHHHHHHHHHHGGGE---------EEEEEEEEEEET
T ss_pred eeEEEECCCcccCccCCHHHHHHHHHHHHHhC---------CCCcEEEEEEcC
Confidence 999999988764 335678899999999 679999887654
No 274
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.15 E-value=8.6e-12 Score=118.31 Aligned_cols=123 Identities=17% Similarity=0.056 Sum_probs=87.3
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.+++|+..+++. .++.+...|+.+. ....+|
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~~--------~~~~~~ 145 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIA---DKIEFICGDFLLL--------ASFLKA 145 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCG---GGEEEEESCHHHH--------GGGCCC
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCC---cCeEEEECChHHh--------cccCCC
Confidence 67899999999999998888886 78999999999999999999998764 4577766555322 124689
Q ss_pred cEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEE-----------eecCCChhHHHHHHHHcCC
Q 009871 415 EVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCH-----------IFRQVDEPSMLSAATQCGF 478 (523)
Q Consensus 415 D~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~-----------~~r~~~~~~~~~~~~~~gf 478 (523)
|+|+++.++.+.......+..+.++| +|+|.+++.. ..+......+...+...|.
T Consensus 146 D~v~~~~~~~~~~~~~~~~~~~~~~L---------~pgG~~i~~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g~ 211 (241)
T 3gdh_A 146 DVVFLSPPWGGPDYATAETFDIRTMM---------SPDGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQ 211 (241)
T ss_dssp SEEEECCCCSSGGGGGSSSBCTTTSC---------SSCHHHHHHHHHHHCSCEEEEEETTBCHHHHHHTTCTTCC
T ss_pred CEEEECCCcCCcchhhhHHHHHHhhc---------CCcceeHHHHHHhhCCceEEECCCCCCHHHHHHHhccCCC
Confidence 99999877776555554555566666 5566654332 2334444555555545443
No 275
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.14 E-value=1.1e-10 Score=109.26 Aligned_cols=112 Identities=18% Similarity=0.172 Sum_probs=82.7
Q ss_pred CCCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
.++.+|||||||+|..+..++... ..+|+++|+++.+++.+++|+..++.. .++.+...|..+. ...+.....
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~--~~~~~~~~~ 131 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN---DRVEVRTGLALDS--LQQIENEKY 131 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEESCHHHH--HHHHHHTTC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEEcCHHHH--HHHHHhcCC
Confidence 367899999999998888888773 469999999999999999999988775 4577766554321 111111112
Q ss_pred CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 009871 412 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 462 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r 462 (523)
++||+|+... .......+++.+.++| +|||.+++.....
T Consensus 132 ~~fD~v~~d~---~~~~~~~~l~~~~~~L---------~pgG~lv~~~~~~ 170 (223)
T 3duw_A 132 EPFDFIFIDA---DKQNNPAYFEWALKLS---------RPGTVIIGDNVVR 170 (223)
T ss_dssp CCCSEEEECS---CGGGHHHHHHHHHHTC---------CTTCEEEEESCSG
T ss_pred CCcCEEEEcC---CcHHHHHHHHHHHHhc---------CCCcEEEEeCCCc
Confidence 5799999752 2456788999999999 7799888765543
No 276
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.14 E-value=1.1e-10 Score=110.08 Aligned_cols=107 Identities=15% Similarity=0.104 Sum_probs=82.8
Q ss_pred CCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
.++.+|||||||+|..+..++... ..+|+++|+++.+++.+++|+..+++. .++.+...|..+. . .....+
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~--~---~~~~~~ 141 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFE---NQVRIIEGNALEQ--F---ENVNDK 141 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCT---TTEEEEESCGGGC--H---HHHTTS
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEECCHHHH--H---HhhccC
Confidence 367899999999998888888753 569999999999999999999988764 4677766555432 1 101256
Q ss_pred CccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 009871 413 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
+||+|++. ........+++.+.++| +|||.+++...
T Consensus 142 ~fD~V~~~---~~~~~~~~~l~~~~~~L---------kpgG~lv~d~~ 177 (232)
T 3ntv_A 142 VYDMIFID---AAKAQSKKFFEIYTPLL---------KHQGLVITDNV 177 (232)
T ss_dssp CEEEEEEE---TTSSSHHHHHHHHGGGE---------EEEEEEEEECT
T ss_pred CccEEEEc---CcHHHHHHHHHHHHHhc---------CCCeEEEEeeC
Confidence 89999975 34667888999999999 67999887433
No 277
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.14 E-value=7e-11 Score=112.61 Aligned_cols=78 Identities=15% Similarity=0.017 Sum_probs=58.9
Q ss_pred hhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCC-CCCCCc
Q 009871 68 GRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSR-QISPSS 146 (523)
Q Consensus 68 ~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~~~~~ 146 (523)
.+.+...++.+|||||||+|.++..|+++ +.+|+|+|+|+.|++.|+++.... +++.++.+.+.+. ...+++
T Consensus 38 l~~l~l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~-----~v~~~~~~~~~~~~~~~~~~ 110 (261)
T 3iv6_A 38 IFLENIVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR-----CVTIDLLDITAEIPKELAGH 110 (261)
T ss_dssp HHTTTCCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS-----CCEEEECCTTSCCCGGGTTC
T ss_pred HHhcCCCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc-----cceeeeeecccccccccCCC
Confidence 34455567889999999999999999988 568999999999999999986532 3455555443200 122578
Q ss_pred eeEEEE
Q 009871 147 IDIVTM 152 (523)
Q Consensus 147 fD~V~~ 152 (523)
||+|++
T Consensus 111 fD~Vv~ 116 (261)
T 3iv6_A 111 FDFVLN 116 (261)
T ss_dssp CSEEEE
T ss_pred ccEEEE
Confidence 999999
No 278
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.14 E-value=7.1e-11 Score=110.44 Aligned_cols=131 Identities=13% Similarity=0.086 Sum_probs=88.4
Q ss_pred CCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhh-hhcC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIK-EENN 411 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~-~~~~ 411 (523)
++++|||||||+|..+..++... ..+|+++|+++.+++.+++|+..++.. .++.+...|..+. +..+. ....
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~--l~~~~~~~~~ 132 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ---DKVTILNGASQDL--IPQLKKKYDV 132 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG---GGEEEEESCHHHH--GGGTTTTSCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC---CceEEEECCHHHH--HHHHHHhcCC
Confidence 56899999999998888888752 469999999999999999999998774 4677766554321 11110 0112
Q ss_pred CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcC-CEEE
Q 009871 412 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCG-FRLV 481 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~g-f~~~ 481 (523)
++||+|+......+......++..+ ++| +|||.+++....+ .....+.+.+++.. |+..
T Consensus 133 ~~fD~V~~d~~~~~~~~~~~~~~~~-~~L---------kpgG~lv~~~~~~-~~~~~~~~~l~~~~~~~~~ 192 (221)
T 3u81_A 133 DTLDMVFLDHWKDRYLPDTLLLEKC-GLL---------RKGTVLLADNVIV-PGTPDFLAYVRGSSSFECT 192 (221)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHT-TCC---------CTTCEEEESCCCC-CCCHHHHHHHHHCTTEEEE
T ss_pred CceEEEEEcCCcccchHHHHHHHhc-ccc---------CCCeEEEEeCCCC-cchHHHHHHHhhCCCceEE
Confidence 6899999864333222222345555 778 6799998866553 34456777776654 4443
No 279
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.14 E-value=1e-10 Score=113.55 Aligned_cols=105 Identities=23% Similarity=0.264 Sum_probs=79.7
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||+|||+|.++..++.....+|+++|+|+.+++.+++|+..+++. .++.+...||.+. . .++|
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~---~~v~~~~~D~~~~--~-------~~~f 190 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVS---DRFFVRKGEFLEP--F-------KEKF 190 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCT---TSEEEEESSTTGG--G-------GGGT
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CceEEEECcchhh--c-------cccc
Confidence 56799999999999988888774468999999999999999999998774 4688888777642 1 1368
Q ss_pred ---cEEEEccc------------cCCCC-------ChHHHHHHHH-HHhhccCCCCCCCCCcEEEEEEe
Q 009871 415 ---EVILGTDV------------SYIPE-------AILPLFATAK-ELTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 415 ---D~Ii~~d~------------~y~~~-------~~~~l~~~l~-~ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
|+|+++.. .|.+. +-..+++.+. +.+ +|||.+++...
T Consensus 191 ~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l---------~pgG~l~~e~~ 250 (284)
T 1nv8_A 191 ASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYD---------TSGKIVLMEIG 250 (284)
T ss_dssp TTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCC---------CTTCEEEEECC
T ss_pred CCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcC---------CCCCEEEEEEC
Confidence 99999732 21111 1126788888 888 67999998654
No 280
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.14 E-value=6.9e-10 Score=104.06 Aligned_cols=132 Identities=16% Similarity=0.163 Sum_probs=90.3
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhc-C-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhh
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE 409 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~-~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~ 409 (523)
...++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+++|+..+ .++.+...|..+.... ..+
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~------~~v~~~~~d~~~~~~~---~~~ 140 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER------RNIVPILGDATKPEEY---RAL 140 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC------TTEEEEECCTTCGGGG---TTT
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc------CCCEEEEccCCCcchh---hcc
Confidence 3557889999999999988888876 4 369999999999999999988764 3566666555432111 112
Q ss_pred cCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCC----hh----HHHHHHHHcCCEEE
Q 009871 410 NNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD----EP----SMLSAATQCGFRLV 481 (523)
Q Consensus 410 ~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~----~~----~~~~~~~~~gf~~~ 481 (523)
..+||+|++... .+.....+++.+.++| +|||.+++....+..+ .. .-+..+.+. |++.
T Consensus 141 -~~~~D~v~~~~~--~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-f~~~ 207 (227)
T 1g8a_A 141 -VPKVDVIFEDVA--QPTQAKILIDNAEVYL---------KRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEY-FEVI 207 (227)
T ss_dssp -CCCEEEEEECCC--STTHHHHHHHHHHHHE---------EEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHHHTT-SEEE
T ss_pred -cCCceEEEECCC--CHhHHHHHHHHHHHhc---------CCCCEEEEEEecCCCCCCCChhhhhHHHHHHHHhh-ceee
Confidence 358999997533 3333345599999999 6799998885443221 11 122334566 9988
Q ss_pred EEcC
Q 009871 482 DKWP 485 (523)
Q Consensus 482 ~~~~ 485 (523)
+...
T Consensus 208 ~~~~ 211 (227)
T 1g8a_A 208 ERLN 211 (227)
T ss_dssp EEEE
T ss_pred eEec
Confidence 7765
No 281
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.14 E-value=1.2e-10 Score=105.83 Aligned_cols=121 Identities=21% Similarity=0.244 Sum_probs=84.7
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCC-Cc
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISP-SS 146 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~-~~ 146 (523)
.+...++.+|||+|||+|..+..+++.+ .+|+|+|+|+.+++.|+++....+ .++.+.++|+.+. +++ ++
T Consensus 28 ~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~ 100 (192)
T 1l3i_A 28 LAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA-----LCKIPD 100 (192)
T ss_dssp HHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH-----HTTSCC
T ss_pred hcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh-----cccCCC
Confidence 3445678899999999999999999886 789999999999999998764332 5799999998751 222 58
Q ss_pred eeEEEEccccccceeeec--ceEEecCCeEEEee----CHHHHHHHHHhCCCcEEEE
Q 009871 147 IDIVTMERLTGKDQKISE--NFYVRGDGTRAFYF----SNDFLTSLFKENGFDVEEL 197 (523)
Q Consensus 147 fD~V~~~~~~~~~~~~~~--~~~~~~~g~~~~~~----~~~~l~~ll~~~Gf~~~~~ 197 (523)
||+|++.........+.. ...++++|.+++.. +..++.+++++.||.+..+
T Consensus 101 ~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 157 (192)
T 1l3i_A 101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNIT 157 (192)
T ss_dssp EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEEE
Confidence 999999211111110000 11467777776532 4567788899999965433
No 282
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.13 E-value=1.7e-10 Score=117.83 Aligned_cols=135 Identities=18% Similarity=0.209 Sum_probs=96.9
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||+|||+|.++..++..++.+|+++|+++.+++.+++|+..|++. .++.+...|..+. ...+ .....+|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~---~~v~~~~~d~~~~--~~~~-~~~~~~f 290 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVE---DRMKFIVGSAFEE--MEKL-QKKGEKF 290 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCG---GGEEEEESCHHHH--HHHH-HHTTCCE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC---ccceEEECCHHHH--HHHH-HhhCCCC
Confidence 77899999999999999888887779999999999999999999999874 2566665544321 1100 0124689
Q ss_pred cEEEEccccCCC---------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHH----HHHHHcCCEEE
Q 009871 415 EVILGTDVSYIP---------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSML----SAATQCGFRLV 481 (523)
Q Consensus 415 D~Ii~~d~~y~~---------~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~----~~~~~~gf~~~ 481 (523)
|+|++....+.. .....++..+.++| +|||.++++........+.+. +.+.+.|..+.
T Consensus 291 D~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 361 (396)
T 2as0_A 291 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLV---------KDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLK 361 (396)
T ss_dssp EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTE---------EEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEE
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhc---------CCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 999985444332 33566777777788 679999888777666654443 34556777776
Q ss_pred EEc
Q 009871 482 DKW 484 (523)
Q Consensus 482 ~~~ 484 (523)
.+.
T Consensus 362 ~i~ 364 (396)
T 2as0_A 362 MLE 364 (396)
T ss_dssp ESS
T ss_pred EEe
Confidence 554
No 283
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.13 E-value=2.4e-10 Score=113.87 Aligned_cols=119 Identities=13% Similarity=0.125 Sum_probs=90.4
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
++.+|||+|||+|.++.. ++ ++.+|+++|+|+.+++.+++|+..|++. .++.+...|..+. . .+|
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~---~~v~~~~~D~~~~---------~-~~f 259 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLE---HKIIPILSDVREV---------D-VKG 259 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEESCGGGC---------C-CCE
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEECChHHh---------c-CCC
Confidence 678999999999988888 66 6789999999999999999999999874 3566665554332 1 589
Q ss_pred cEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHc-CCEEEEE
Q 009871 415 EVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQC-GFRLVDK 483 (523)
Q Consensus 415 D~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~-gf~~~~~ 483 (523)
|+|++.. .+. ...++..+.++| +|+|.++++..... ...+.+.+.+. |+++..+
T Consensus 260 D~Vi~dp-P~~---~~~~l~~~~~~L---------~~gG~l~~~~~~~~--~~~~~~~l~~~~~~~i~~~ 314 (336)
T 2yx1_A 260 NRVIMNL-PKF---AHKFIDKALDIV---------EEGGVIHYYTIGKD--FDKAIKLFEKKCDCEVLEK 314 (336)
T ss_dssp EEEEECC-TTT---GGGGHHHHHHHE---------EEEEEEEEEEEESS--SHHHHHHHHHHSEEEEEEE
T ss_pred cEEEECC-cHh---HHHHHHHHHHHc---------CCCCEEEEEEeecC--chHHHHHHHHhcCCcEEEE
Confidence 9999843 332 347888899999 56898888766544 45566777666 6665443
No 284
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.12 E-value=2.1e-10 Score=106.58 Aligned_cols=120 Identities=19% Similarity=0.189 Sum_probs=88.1
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCc
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 402 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~ 402 (523)
+.+++... .++.+|||||||+|.++..+ +.+|+++|+++. .+.+...|..+.
T Consensus 58 ~~~~l~~~---~~~~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~-------------------~~~~~~~d~~~~-- 109 (215)
T 2zfu_A 58 IARDLRQR---PASLVVADFGCGDCRLASSI----RNPVHCFDLASL-------------------DPRVTVCDMAQV-- 109 (215)
T ss_dssp HHHHHHTS---CTTSCEEEETCTTCHHHHHC----CSCEEEEESSCS-------------------STTEEESCTTSC--
T ss_pred HHHHHhcc---CCCCeEEEECCcCCHHHHHh----hccEEEEeCCCC-------------------CceEEEeccccC--
Confidence 44445432 36779999999999766554 257999999986 122333343321
Q ss_pred chhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-CChhHHHHHHHHcCCEEE
Q 009871 403 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-VDEPSMLSAATQCGFRLV 481 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-~~~~~~~~~~~~~gf~~~ 481 (523)
++++++||+|+++.++++ .....+++.+.++| +|||.++++..... .+...+.+.+++.||++.
T Consensus 110 -----~~~~~~fD~v~~~~~l~~-~~~~~~l~~~~~~L---------~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~ 174 (215)
T 2zfu_A 110 -----PLEDESVDVAVFCLSLMG-TNIRDFLEEANRVL---------KPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIV 174 (215)
T ss_dssp -----SCCTTCEEEEEEESCCCS-SCHHHHHHHHHHHE---------EEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEE
T ss_pred -----CCCCCCEeEEEEehhccc-cCHHHHHHHHHHhC---------CCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEE
Confidence 234568999999999974 78899999999999 67999998766543 356778899999999998
Q ss_pred EEcC
Q 009871 482 DKWP 485 (523)
Q Consensus 482 ~~~~ 485 (523)
....
T Consensus 175 ~~~~ 178 (215)
T 2zfu_A 175 SKDL 178 (215)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7644
No 285
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.12 E-value=5e-11 Score=124.05 Aligned_cols=116 Identities=18% Similarity=0.246 Sum_probs=88.4
Q ss_pred HHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCC
Q 009871 322 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRD 401 (523)
Q Consensus 322 ~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~ 401 (523)
.+.+.+.......++.+|||||||+|.++..++..+..+|+++|+++ +++.|++|+..|++. .++.+...|+.+..
T Consensus 145 ~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~---~~v~~~~~d~~~~~ 220 (480)
T 3b3j_A 145 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLT---DRIVVIPGKVEEVS 220 (480)
T ss_dssp HHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCT---TTEEEEESCTTTCC
T ss_pred HHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCC---CcEEEEECchhhCc
Confidence 34455555555557889999999999888888887777999999998 999999999998875 57888887776531
Q ss_pred cchhhhhhcCCCccEEEEccccCCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEE
Q 009871 402 HIEAIKEENNEGFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILC 458 (523)
Q Consensus 402 ~~~~~~~~~~~~fD~Ii~~d~~y~~--~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~ 458 (523)
+ +++||+|+++.++|+. +.....+..+.++| +|||.+++.
T Consensus 221 -------~-~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~L---------kpgG~li~~ 262 (480)
T 3b3j_A 221 -------L-PEQVDIIISEPMGYMLFNERMLESYLHAKKYL---------KPSGNMFPT 262 (480)
T ss_dssp -------C-SSCEEEEECCCCHHHHTCHHHHHHHHHGGGGE---------EEEEEEESC
T ss_pred -------c-CCCeEEEEEeCchHhcCcHHHHHHHHHHHHhc---------CCCCEEEEE
Confidence 1 3589999998776653 33455566667888 679988853
No 286
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.12 E-value=2.5e-10 Score=110.05 Aligned_cols=71 Identities=23% Similarity=0.364 Sum_probs=63.3
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
.++.+|||||||+|.++..+++..++.+|+|+|+|+.|++.|+++. .++.+.++|+.++ ++++++||+|++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~----~~~~~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHRL----PFSDTSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTSC----SBCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchhhC----CCCCCceeEEEE
Confidence 4678999999999999999999877789999999999999999874 4578999999877 667889999998
No 287
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.12 E-value=3.8e-10 Score=108.95 Aligned_cols=105 Identities=14% Similarity=0.103 Sum_probs=81.8
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
..++.+|||+|||+|.++..++..+ +.+|+++|+++.+++.|++|++.|++. ++.+...|..+. . . .
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~----~~~~~~~d~~~~-~------~-~ 184 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN----NVIPILADNRDV-E------L-K 184 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS----SEEEEESCGGGC-C------C-T
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----CEEEEECChHHc-C------c-c
Confidence 3478899999999999999888874 569999999999999999999999874 355555444322 1 1 3
Q ss_pred CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 009871 412 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 462 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r 462 (523)
.+||+|++.... ....++..+.++| +|+|.++++....
T Consensus 185 ~~~D~Vi~d~p~----~~~~~l~~~~~~L---------kpgG~l~~s~~~~ 222 (272)
T 3a27_A 185 DVADRVIMGYVH----KTHKFLDKTFEFL---------KDRGVIHYHETVA 222 (272)
T ss_dssp TCEEEEEECCCS----SGGGGHHHHHHHE---------EEEEEEEEEEEEE
T ss_pred CCceEEEECCcc----cHHHHHHHHHHHc---------CCCCEEEEEEcCc
Confidence 589999986442 6778889999999 6789888766554
No 288
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.12 E-value=5.1e-10 Score=102.78 Aligned_cols=117 Identities=13% Similarity=0.012 Sum_probs=79.6
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
.++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++|+. ++.+...|..+ + +++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~---------~~~~~~~d~~~---------~-~~~ 110 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG---------GVNFMVADVSE---------I-SGK 110 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT---------TSEEEECCGGG---------C-CCC
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC---------CCEEEECcHHH---------C-CCC
Confidence 4778999999999998888888876789999999999999999865 23444444322 1 258
Q ss_pred ccEEEEccccCCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEc
Q 009871 414 FEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKW 484 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~--~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~ 484 (523)
||+|+++.++++... ...+++.+.+++ |+ ++++... .....+.+.+.+.| ++..+.
T Consensus 111 ~D~v~~~~p~~~~~~~~~~~~l~~~~~~~-----------g~-~~~~~~~--~~~~~~~~~~~~~g-~~~~~~ 168 (200)
T 1ne2_A 111 YDTWIMNPPFGSVVKHSDRAFIDKAFETS-----------MW-IYSIGNA--KARDFLRREFSARG-DVFREE 168 (200)
T ss_dssp EEEEEECCCC-------CHHHHHHHHHHE-----------EE-EEEEEEG--GGHHHHHHHHHHHE-EEEEEE
T ss_pred eeEEEECCCchhccCchhHHHHHHHHHhc-----------Cc-EEEEEcC--chHHHHHHHHHHCC-CEEEEE
Confidence 999999877766432 345666666665 44 4444332 23345667778888 776654
No 289
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.12 E-value=1.2e-10 Score=110.97 Aligned_cols=115 Identities=13% Similarity=0.095 Sum_probs=78.4
Q ss_pred CCCeEEEECCCccHHHHHHHhc--C-CCEEEEEcCChHHHHHHHHHHHhc---CCCCC----------------------
Q 009871 335 AGKKVLELGCGCGGICSMVAAG--S-ADLVVATDGDSIALDLLAQNVTAN---LKPPF---------------------- 386 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~--~-~~~V~~~D~~~~~l~~~~~n~~~n---~~~~~---------------------- 386 (523)
++.+|||+|||+|.++..++.. . ..+|+++|+|+.+++.|++|+..+ ++...
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999888888776 2 458999999999999999998876 33100
Q ss_pred CCceE-------------EEeeecCCCCcchhhhhh-cCCCccEEEEccccCCCC---------ChHHHHHHHHHHhhcc
Q 009871 387 LAKLI-------------TKRLEWGNRDHIEAIKEE-NNEGFEVILGTDVSYIPE---------AILPLFATAKELTASS 443 (523)
Q Consensus 387 ~~~v~-------------~~~ldw~~~~~~~~~~~~-~~~~fD~Ii~~d~~y~~~---------~~~~l~~~l~~ll~~~ 443 (523)
..++. +...|+.+.... ... ...+||+|+++.+..... ....+++.+.++|
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~---~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~L--- 204 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRAL---SAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASAL--- 204 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGH---HHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHS---
T ss_pred hhhhhhhccccccccccceeeccccccccc---ccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhc---
Confidence 00033 555554432100 000 234899999986544332 2458899999999
Q ss_pred CCCCCCCCCcEEEEEEee
Q 009871 444 NKSLREDQQPAFILCHIF 461 (523)
Q Consensus 444 ~~~~~~~~~g~~~l~~~~ 461 (523)
+|||.++++...
T Consensus 205 ------kpgG~l~~~~~~ 216 (250)
T 1o9g_A 205 ------PAHAVIAVTDRS 216 (250)
T ss_dssp ------CTTCEEEEEESS
T ss_pred ------CCCcEEEEeCcc
Confidence 779999985443
No 290
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.12 E-value=4.6e-10 Score=104.85 Aligned_cols=108 Identities=12% Similarity=0.136 Sum_probs=80.4
Q ss_pred CCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
++.+|||||||+|..+..++... ..+|+++|+++.+++.+++|+..++... .++.+...|.. +.+..+..+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~--~~i~~~~gda~-----~~l~~~~~~ 128 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSP--SRVRFLLSRPL-----DVMSRLAND 128 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCG--GGEEEECSCHH-----HHGGGSCTT
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCc--CcEEEEEcCHH-----HHHHHhcCC
Confidence 34599999999998888887752 4699999999999999999999987631 35666543322 111223357
Q ss_pred CccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 413 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
+||+|+.. ........+++.+.++| +|||.+++....
T Consensus 129 ~fD~V~~d---~~~~~~~~~l~~~~~~L---------kpGG~lv~dn~~ 165 (221)
T 3dr5_A 129 SYQLVFGQ---VSPMDLKALVDAAWPLL---------RRGGALVLADAL 165 (221)
T ss_dssp CEEEEEEC---CCTTTHHHHHHHHHHHE---------EEEEEEEETTTT
T ss_pred CcCeEEEc---CcHHHHHHHHHHHHHHc---------CCCcEEEEeCCC
Confidence 89999985 34567788999999999 679999875433
No 291
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.11 E-value=1.7e-09 Score=103.27 Aligned_cols=84 Identities=12% Similarity=0.174 Sum_probs=62.5
Q ss_pred CCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc---
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN--- 410 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~--- 410 (523)
++.+|||+|||+|.++..++... ..+|+++|+++.|++.|++|+..+++. .++.+...|..+. ... .+.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-~~~---~~~~~~ 137 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLS---DLIKVVKVPQKTL-LMD---ALKEES 137 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEECCTTCS-STT---TSTTCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCC---ccEEEEEcchhhh-hhh---hhhccc
Confidence 57799999999998888887763 468999999999999999999998775 4577776654321 000 112
Q ss_pred CCCccEEEEccccCC
Q 009871 411 NEGFEVILGTDVSYI 425 (523)
Q Consensus 411 ~~~fD~Ii~~d~~y~ 425 (523)
+.+||+|+++...+.
T Consensus 138 ~~~fD~i~~npp~~~ 152 (254)
T 2h00_A 138 EIIYDFCMCNPPFFA 152 (254)
T ss_dssp SCCBSEEEECCCCC-
T ss_pred CCcccEEEECCCCcc
Confidence 258999999866543
No 292
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.11 E-value=9e-11 Score=106.35 Aligned_cols=74 Identities=16% Similarity=0.100 Sum_probs=61.5
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++....+ .++++++.|+..+. .+.+++||+|++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~---~~~~~~fD~v~~ 95 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD---HYVREPIRAAIF 95 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG---GTCCSCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH---hhccCCcCEEEE
Confidence 46789999999999999999988 6789999999999999999875332 67999998776531 134678999987
No 293
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.11 E-value=1.8e-10 Score=109.66 Aligned_cols=109 Identities=12% Similarity=0.063 Sum_probs=83.4
Q ss_pred CCCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc-
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN- 410 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~- 410 (523)
.++++|||||||+|..+..++... ..+|+++|+++.+++.+++|+..++.. .++.+...|..+. +..+.
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~---~~v~~~~~d~~~~-----l~~~~~ 133 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD---QRVTLREGPALQS-----LESLGE 133 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT---TTEEEEESCHHHH-----HHTCCS
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEEcCHHHH-----HHhcCC
Confidence 367899999999998888888763 569999999999999999999998775 4677766544221 11111
Q ss_pred CCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 009871 411 NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 462 (523)
Q Consensus 411 ~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r 462 (523)
.++||+|++. ........+++.+.++| +|||.+++....+
T Consensus 134 ~~~fD~V~~d---~~~~~~~~~l~~~~~~L---------kpGG~lv~~~~~~ 173 (248)
T 3tfw_A 134 CPAFDLIFID---ADKPNNPHYLRWALRYS---------RPGTLIIGDNVVR 173 (248)
T ss_dssp CCCCSEEEEC---SCGGGHHHHHHHHHHTC---------CTTCEEEEECCSG
T ss_pred CCCeEEEEEC---CchHHHHHHHHHHHHhc---------CCCeEEEEeCCCc
Confidence 3489999984 24556788999999999 7799998876553
No 294
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.11 E-value=1.8e-10 Score=107.33 Aligned_cols=135 Identities=15% Similarity=0.107 Sum_probs=89.1
Q ss_pred CCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
.++.+|||||||+|.++..++..+ ..+|+++|+|+.|++.+.+++..+.......++.+...|..+. ++...
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l-------~~~~~ 98 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL-------PPLSG 98 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC-------CSCCC
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC-------CCCCC
Confidence 367899999999999998888885 4689999999999986554443322212224677776665543 12233
Q ss_pred CccEEEEc---cccC--CCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-------------CCh----hHHH
Q 009871 413 GFEVILGT---DVSY--IPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------VDE----PSML 470 (523)
Q Consensus 413 ~fD~Ii~~---d~~y--~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-------------~~~----~~~~ 470 (523)
. |.|... ...+ +......+++.+.++| +|||.++++..... ... ..+.
T Consensus 99 ~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 168 (218)
T 3mq2_A 99 V-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVC---------RPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLA 168 (218)
T ss_dssp E-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTE---------EEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHH
T ss_pred C-CEEEEEccchhhhhhhhccHHHHHHHHHHHc---------CCCcEEEEEeccccccccccccccCCccchHHHHHHHH
Confidence 4 666622 1111 2233488999999999 67999998754311 111 2356
Q ss_pred HHHHHcCCEEEEEcC
Q 009871 471 SAATQCGFRLVDKWP 485 (523)
Q Consensus 471 ~~~~~~gf~~~~~~~ 485 (523)
..+.++||++.++..
T Consensus 169 ~~l~~aGf~i~~~~~ 183 (218)
T 3mq2_A 169 PRYAEAGWKLADCRY 183 (218)
T ss_dssp HHHHHTTEEEEEEEE
T ss_pred HHHHHcCCCceeeec
Confidence 678899999988744
No 295
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.11 E-value=4.6e-10 Score=112.80 Aligned_cols=138 Identities=20% Similarity=0.100 Sum_probs=96.8
Q ss_pred HHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCC
Q 009871 322 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGN 399 (523)
Q Consensus 322 ~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~ 399 (523)
.++..+.......++.+|||+|||+|.++..++..+ ..+|+++|+|+.+++.|++|+..+++. .+.+...|..+
T Consensus 190 ~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~----~i~~~~~D~~~ 265 (354)
T 3tma_A 190 VLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS----WIRFLRADARH 265 (354)
T ss_dssp HHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT----TCEEEECCGGG
T ss_pred HHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC----ceEEEeCChhh
Confidence 355555444445578899999999999888888864 358999999999999999999998773 46666655543
Q ss_pred CCcchhhhhhcCCCccEEEEccccCCCCC---------hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHH
Q 009871 400 RDHIEAIKEENNEGFEVILGTDVSYIPEA---------ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSML 470 (523)
Q Consensus 400 ~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~---------~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~ 470 (523)
. +.+...||+|+++.. |.... +..+++.+.++| +|||.+++.... . .++
T Consensus 266 ~-------~~~~~~~D~Ii~npP-yg~r~~~~~~~~~~~~~~~~~~~~~L---------kpgG~l~i~t~~----~-~~~ 323 (354)
T 3tma_A 266 L-------PRFFPEVDRILANPP-HGLRLGRKEGLFHLYWDFLRGALALL---------PPGGRVALLTLR----P-ALL 323 (354)
T ss_dssp G-------GGTCCCCSEEEECCC-SCC----CHHHHHHHHHHHHHHHHTS---------CTTCEEEEEESC----H-HHH
T ss_pred C-------ccccCCCCEEEECCC-CcCccCCcccHHHHHHHHHHHHHHhc---------CCCcEEEEEeCC----H-HHH
Confidence 2 122457899999644 44321 367888889999 679999887643 2 233
Q ss_pred HHHHHcCCEEEEEcC
Q 009871 471 SAATQCGFRLVDKWP 485 (523)
Q Consensus 471 ~~~~~~gf~~~~~~~ 485 (523)
+.+.+.||++.+...
T Consensus 324 ~~~~~~g~~~~~~~~ 338 (354)
T 3tma_A 324 KRALPPGFALRHARV 338 (354)
T ss_dssp HHHCCTTEEEEEEEE
T ss_pred HHHhhcCcEEEEEEE
Confidence 332228998876543
No 296
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.11 E-value=2.7e-10 Score=115.36 Aligned_cols=123 Identities=16% Similarity=0.192 Sum_probs=85.1
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCcee
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
++..++.+|||||||+|..+..+++.+|+.+++|+|+ +.|++.|+++.... ..+++++++|+.+ +++. .||
T Consensus 178 ~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~~~-~~D 250 (374)
T 1qzz_A 178 YDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-----PLPV-TAD 250 (374)
T ss_dssp SCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-----CCSC-CEE
T ss_pred CCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-----cCCC-CCC
Confidence 3445678999999999999999999999899999999 99999999876432 2479999999974 2333 499
Q ss_pred EEEE-------------------ccccccceeeecceE--EecCCeE----------------EEeeCHHHHHHHHHhCC
Q 009871 149 IVTM-------------------ERLTGKDQKISENFY--VRGDGTR----------------AFYFSNDFLTSLFKENG 191 (523)
Q Consensus 149 ~V~~-------------------~~~~~~~~~~~~~~~--~~~~g~~----------------~~~~~~~~l~~ll~~~G 191 (523)
+|++ .+.+++++.+.-... ..++... ...++.+++.++|+++|
T Consensus 251 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 330 (374)
T 1qzz_A 251 VVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAG 330 (374)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTT
T ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCC
Confidence 9999 122233332211000 0011000 01248899999999999
Q ss_pred CcEEEEEeE
Q 009871 192 FDVEELGLC 200 (523)
Q Consensus 192 f~~~~~~~~ 200 (523)
|+++++...
T Consensus 331 f~~~~~~~~ 339 (374)
T 1qzz_A 331 LALASERTS 339 (374)
T ss_dssp EEEEEEEEE
T ss_pred CceEEEEEC
Confidence 998877543
No 297
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.10 E-value=1.1e-10 Score=111.21 Aligned_cols=118 Identities=12% Similarity=0.242 Sum_probs=81.3
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc---------CCCcEEEEEeeccCCccCCCCCC
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF---------TETRVSTFVCDLISDDLSRQISP 144 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~---------~~~~v~~~~~d~~~~~~~~~~~~ 144 (523)
.++.+|||||||+|.++..+++.+|+..|+|||+|+.|++.|+++... ...++.++++|+.+. ++..+++
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~-l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKF-LPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSC-GGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHH-HHHhccc
Confidence 367899999999999999999998888999999999999999886532 235799999999852 2223667
Q ss_pred CceeEEEE---ccccccc---------eeeec-ceEEecCCeEEEeeCHH----HHHHHHHhCCC
Q 009871 145 SSIDIVTM---ERLTGKD---------QKISE-NFYVRGDGTRAFYFSND----FLTSLFKENGF 192 (523)
Q Consensus 145 ~~fD~V~~---~~~~~~~---------~~~~~-~~~~~~~g~~~~~~~~~----~l~~ll~~~Gf 192 (523)
+++|.|+. ..+.+.. ..+.. ...++++|.+.+....+ .+.+.+...|+
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 89999987 1110000 00000 12578888877754433 34445556653
No 298
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.10 E-value=7.9e-11 Score=104.97 Aligned_cols=74 Identities=15% Similarity=0.199 Sum_probs=60.3
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
++..+|||+|||+|.++..++...|+++|+|+|+|+.|++.+++++...+...++..+|.... .++++||+|++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-----~~~~~~DvVLa 121 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-----VYKGTYDVVFL 121 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-----HTTSEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-----CCCCCcChhhH
Confidence 457899999999999999999999999999999999999999998765443323333666532 35788999999
No 299
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.10 E-value=1.5e-10 Score=107.67 Aligned_cols=101 Identities=16% Similarity=0.162 Sum_probs=73.6
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEEc
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTME 153 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (523)
.++.+|||||||+|..+..++ .+|+|+|+|+. ++.+.++|+.++ ++++++||+|++.
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~--------------~~~~~~~d~~~~----~~~~~~fD~v~~~ 122 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL--------------DPRVTVCDMAQV----PLEDESVDVAVFC 122 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS--------------STTEEESCTTSC----SCCTTCEEEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC--------------CceEEEeccccC----CCCCCCEeEEEEe
Confidence 567899999999999987763 45999999998 356789999876 6778899999992
Q ss_pred ccccc---ceeeec-ceEEecCCeEEEe------eCHHHHHHHHHhCCCcEEEE
Q 009871 154 RLTGK---DQKISE-NFYVRGDGTRAFY------FSNDFLTSLFKENGFDVEEL 197 (523)
Q Consensus 154 ~~~~~---~~~~~~-~~~~~~~g~~~~~------~~~~~l~~ll~~~Gf~~~~~ 197 (523)
..+.. ...+.. .-.++++|.+++. .+.+++.++++++||.++..
T Consensus 123 ~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 123 LSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp SCCCSSCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEE
T ss_pred hhccccCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 21110 000000 1246778877652 37899999999999998764
No 300
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.10 E-value=3.1e-10 Score=111.42 Aligned_cols=137 Identities=12% Similarity=0.062 Sum_probs=92.7
Q ss_pred CCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHh-cCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTA-NLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~-n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
++++|||||||+|.++..+++.. ..+|+++|+|+.+++.+++++.. +.. ....++.+...|..+. +.....+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~-~~~~~v~~~~~D~~~~-----~~~~~~~ 168 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRS-LADPRATVRVGDGLAF-----VRQTPDN 168 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHH-----HHSSCTT
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcc-cCCCcEEEEECcHHHH-----HHhccCC
Confidence 56899999999998888888773 56999999999999999998742 111 1124666665544221 1111356
Q ss_pred CccEEEEccccCCCC--Ch--HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCC---hhHHHHHHHHcCCEEEEEcC
Q 009871 413 GFEVILGTDVSYIPE--AI--LPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD---EPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~--~~--~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~---~~~~~~~~~~~gf~~~~~~~ 485 (523)
+||+|++.-...... .+ ..+++.+.++| +|||.+++........ ...+.+.+++.||....+..
T Consensus 169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~L---------kpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~ 239 (304)
T 3bwc_A 169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRIL---------KPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYAL 239 (304)
T ss_dssp CEEEEEEECC---------CCHHHHHHHHHHE---------EEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ceeEEEECCCCccccchhhhHHHHHHHHHHhc---------CCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEE
Confidence 899999853332211 11 68899999999 6799998875543222 24577788899998777654
Q ss_pred C
Q 009871 486 S 486 (523)
Q Consensus 486 ~ 486 (523)
.
T Consensus 240 ~ 240 (304)
T 3bwc_A 240 M 240 (304)
T ss_dssp C
T ss_pred e
Confidence 4
No 301
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.10 E-value=3.4e-10 Score=109.72 Aligned_cols=129 Identities=14% Similarity=0.148 Sum_probs=94.8
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhc-C-CCEEEEEcCChHHHHHHHHHHHhc-C-CCCCCCceEEEeeecCCCCcchhhh
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAG-S-ADLVVATDGDSIALDLLAQNVTAN-L-KPPFLAKLITKRLEWGNRDHIEAIK 407 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~-~-~~~V~~~D~~~~~l~~~~~n~~~n-~-~~~~~~~v~~~~ldw~~~~~~~~~~ 407 (523)
...++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+++|+..+ + +. .++.+...|..+.
T Consensus 96 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~---~~v~~~~~d~~~~------- 165 (280)
T 1i9g_A 96 DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPP---DNWRLVVSDLADS------- 165 (280)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCC---TTEEEECSCGGGC-------
T ss_pred CCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCC---CcEEEEECchHhc-------
Confidence 4557889999999999888888875 3 469999999999999999999886 4 22 3566665554332
Q ss_pred hhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHH-cCCEEEEEcC
Q 009871 408 EENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQ-CGFRLVDKWP 485 (523)
Q Consensus 408 ~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~-~gf~~~~~~~ 485 (523)
.+..++||+|++. ......+++.+.++| +|+|.+++..... .....+.+.+++ .+|...+++.
T Consensus 166 ~~~~~~~D~v~~~-----~~~~~~~l~~~~~~L---------~pgG~l~~~~~~~-~~~~~~~~~l~~~~~f~~~~~~~ 229 (280)
T 1i9g_A 166 ELPDGSVDRAVLD-----MLAPWEVLDAVSRLL---------VAGGVLMVYVATV-TQLSRIVEALRAKQCWTEPRAWE 229 (280)
T ss_dssp CCCTTCEEEEEEE-----SSCGGGGHHHHHHHE---------EEEEEEEEEESSH-HHHHHHHHHHHHHSSBCCCEEEC
T ss_pred CCCCCceeEEEEC-----CcCHHHHHHHHHHhC---------CCCCEEEEEeCCH-HHHHHHHHHHHhcCCcCCcEEEE
Confidence 1234689999983 235668899999999 6799988876542 123355666666 7888777665
No 302
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.09 E-value=2.1e-10 Score=115.46 Aligned_cols=123 Identities=14% Similarity=0.155 Sum_probs=89.0
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCce
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
.++..++.+|||||||+|..+..+++++|+.+|+|+|+ +.|++.|+++.... ..+++++.+|+.+. ++++ +
T Consensus 185 ~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~--~ 257 (359)
T 1x19_A 185 EAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE----SYPE--A 257 (359)
T ss_dssp HCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS----CCCC--C
T ss_pred hcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC----CCCC--C
Confidence 33446778999999999999999999999999999999 99999999876432 34699999999865 4444 3
Q ss_pred eEEEE-------------------ccccccceeeecceEEec------------------CCe-EEEeeCHHHHHHHHHh
Q 009871 148 DIVTM-------------------ERLTGKDQKISENFYVRG------------------DGT-RAFYFSNDFLTSLFKE 189 (523)
Q Consensus 148 D~V~~-------------------~~~~~~~~~~~~~~~~~~------------------~g~-~~~~~~~~~l~~ll~~ 189 (523)
|+|++ .+.+++++.+.-.....+ +|. ...+++.+++.+++++
T Consensus 258 D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~ 337 (359)
T 1x19_A 258 DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILES 337 (359)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHH
T ss_pred CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHH
Confidence 99999 233344544421111111 111 1122688999999999
Q ss_pred CCCcEEEEEe
Q 009871 190 NGFDVEELGL 199 (523)
Q Consensus 190 ~Gf~~~~~~~ 199 (523)
+||+++++..
T Consensus 338 aGf~~v~~~~ 347 (359)
T 1x19_A 338 LGYKDVTMVR 347 (359)
T ss_dssp HTCEEEEEEE
T ss_pred CCCceEEEEe
Confidence 9999877654
No 303
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.09 E-value=2.1e-10 Score=106.19 Aligned_cols=81 Identities=16% Similarity=0.040 Sum_probs=66.9
Q ss_pred HHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCC
Q 009871 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISP 144 (523)
Q Consensus 66 ~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~ 144 (523)
.+.+.+...++.+|||||||+|..+..+++. +.+|+|+|+|+.+++.|+++.... ..++++.++|+.+. ..++
T Consensus 68 ~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~~~~ 141 (210)
T 3lbf_A 68 RMTELLELTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG----WQAR 141 (210)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----CGGG
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC----CccC
Confidence 3344455577899999999999999999998 678999999999999999976432 35799999999875 3456
Q ss_pred CceeEEEE
Q 009871 145 SSIDIVTM 152 (523)
Q Consensus 145 ~~fD~V~~ 152 (523)
++||+|++
T Consensus 142 ~~~D~i~~ 149 (210)
T 3lbf_A 142 APFDAIIV 149 (210)
T ss_dssp CCEEEEEE
T ss_pred CCccEEEE
Confidence 79999998
No 304
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.09 E-value=2.2e-10 Score=110.17 Aligned_cols=106 Identities=17% Similarity=0.220 Sum_probs=70.0
Q ss_pred HHHHHHHHh---cccccccchhhhHHHHhhhhcCCCCCeEEEECCCccc----cHHHHHhhCC----CCEEEEEeCCHHH
Q 009871 43 KYWDLFYKR---HQDRFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGN----TIFPLIAAYP----DVFVYACDFSPRA 111 (523)
Q Consensus 43 ~~Wd~~y~~---~~~~f~~~~~~l~~~~~~~~~~~~~~~iLDiGcG~G~----~~~~l~~~~~----~~~v~gvD~S~~~ 111 (523)
.-|..+.+. +...|+.+...+..--..++|..++.+|||+|||||. ++..|++..+ +++|+|+|+|+.|
T Consensus 70 ~e~~~l~~~lt~~~t~FfRd~~~f~~l~~~llp~~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~ 149 (274)
T 1af7_A 70 AEWQAFINALTTNLTAFFREAHHFPILAEHARRRHGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEV 149 (274)
T ss_dssp THHHHHHHHHCCCCCCTTTTTTHHHHHHHHHHHSCSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHH
T ss_pred HHHHHHHHHHhhcCccccCChHHHHHHHHHccCCCCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHH
Confidence 456666554 3455664433221111123332245799999999998 5556666533 4689999999999
Q ss_pred HHHHHhccc--------------------c---CC---------CcEEEEEeeccCCccCCCCC-CCceeEEEE
Q 009871 112 VNLVMTHKD--------------------F---TE---------TRVSTFVCDLISDDLSRQIS-PSSIDIVTM 152 (523)
Q Consensus 112 l~~a~~~~~--------------------~---~~---------~~v~~~~~d~~~~~~~~~~~-~~~fD~V~~ 152 (523)
|+.|++..- . .+ .++.|.++|+.+. +++ .++||+|+|
T Consensus 150 L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~----~~~~~~~fDlI~c 219 (274)
T 1af7_A 150 LEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEK----QYNVPGPFDAIFC 219 (274)
T ss_dssp HHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCS----SCCCCCCEEEEEE
T ss_pred HHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCC----CCCcCCCeeEEEE
Confidence 999998641 0 00 3689999999865 343 578999999
No 305
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.09 E-value=8.6e-10 Score=111.51 Aligned_cols=131 Identities=8% Similarity=0.014 Sum_probs=94.1
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCC-CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
.++++|||+| |+|.++..++..++ .+|+++|+++.|++.+++|+..+++. ++.+...|..+. +. ....+
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~----~v~~~~~D~~~~--l~---~~~~~ 240 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE----DIEIFTFDLRKP--LP---DYALH 240 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC----CEEEECCCTTSC--CC---TTTSS
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CEEEEEChhhhh--ch---hhccC
Confidence 3688999999 99999888888776 79999999999999999999998763 577776666542 11 00135
Q ss_pred CccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcE-EEEEEeecCCCh---hHHHHHHH-HcCCEEEEEc
Q 009871 413 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPA-FILCHIFRQVDE---PSMLSAAT-QCGFRLVDKW 484 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~-~~l~~~~r~~~~---~~~~~~~~-~~gf~~~~~~ 484 (523)
+||+|+++.+ |.......+++.+.++| +|||+ ++++...+..+. ..+.+.+. +.||.+..++
T Consensus 241 ~fD~Vi~~~p-~~~~~~~~~l~~~~~~L---------kpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 307 (373)
T 2qm3_A 241 KFDTFITDPP-ETLEAIRAFVGRGIATL---------KGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVITDII 307 (373)
T ss_dssp CBSEEEECCC-SSHHHHHHHHHHHHHTB---------CSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred CccEEEECCC-CchHHHHHHHHHHHHHc---------ccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcchhhhh
Confidence 8999999654 43333678888888999 67884 355443322333 34556666 7899886654
No 306
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.09 E-value=2.9e-10 Score=103.33 Aligned_cols=121 Identities=16% Similarity=0.216 Sum_probs=82.9
Q ss_pred HHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-Cc--EEEEEeeccCCccCCCC
Q 009871 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TR--VSTFVCDLISDDLSRQI 142 (523)
Q Consensus 66 ~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~--v~~~~~d~~~~~~~~~~ 142 (523)
.+.+.+...++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++....+ .+ ++++++|+.+. +
T Consensus 43 ~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~ 115 (194)
T 1dus_A 43 ILVENVVVDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-----V 115 (194)
T ss_dssp HHHHHCCCCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-----C
T ss_pred HHHHHcccCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-----c
Confidence 3334455567889999999999999999988 6789999999999999999764332 33 99999998753 3
Q ss_pred CCCceeEEEEcccccc----cee-eec-ceEEecCCeEEEee----CHHHHHHHHHhCCCcE
Q 009871 143 SPSSIDIVTMERLTGK----DQK-ISE-NFYVRGDGTRAFYF----SNDFLTSLFKENGFDV 194 (523)
Q Consensus 143 ~~~~fD~V~~~~~~~~----~~~-~~~-~~~~~~~g~~~~~~----~~~~l~~ll~~~Gf~~ 194 (523)
++++||+|++...... ... +.. .-.++++|.+++.. ...++.+.+++. |..
T Consensus 116 ~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-~~~ 176 (194)
T 1dus_A 116 KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDV-FGN 176 (194)
T ss_dssp TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHH-HSC
T ss_pred ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHH-hcc
Confidence 4678999999211111 000 000 11477788776532 234467777766 543
No 307
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.09 E-value=4.6e-10 Score=105.27 Aligned_cols=117 Identities=17% Similarity=0.211 Sum_probs=83.0
Q ss_pred CCCCCeEEEECCCccccHHHHHhh-CCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
..++.+|||+|||+|.++..+++. .++.+|+|+|+|+.|++.++++.... .+++++++|+.+.....++ +++||+|+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~-~~~~D~v~ 148 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRAL-VPKVDVIF 148 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTT-CCCEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcc-cCCceEEE
Confidence 457789999999999999999988 46678999999999999998877544 6899999999863211122 35899999
Q ss_pred Eccc--------cccceeeecceEEecCCeEEEee--------------CHHHHHHHHHhCCCcEEEEE
Q 009871 152 MERL--------TGKDQKISENFYVRGDGTRAFYF--------------SNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 152 ~~~~--------~~~~~~~~~~~~~~~~g~~~~~~--------------~~~~l~~ll~~~Gf~~~~~~ 198 (523)
+.-. +....+ .++++|.+++.+ ..+++..+ .++ |++++..
T Consensus 149 ~~~~~~~~~~~~l~~~~~-----~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~ 210 (227)
T 1g8a_A 149 EDVAQPTQAKILIDNAEV-----YLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERL 210 (227)
T ss_dssp ECCCSTTHHHHHHHHHHH-----HEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEE
T ss_pred ECCCCHhHHHHHHHHHHH-----hcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEe
Confidence 8111 111111 567777765532 13566666 666 8876553
No 308
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.09 E-value=8.3e-10 Score=100.63 Aligned_cols=144 Identities=13% Similarity=0.134 Sum_probs=93.3
Q ss_pred hHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecC
Q 009871 319 SAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWG 398 (523)
Q Consensus 319 ~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~ 398 (523)
++..|.+.+.......++.+|||||||+|+++..++.. ..+|+++|+++.. . ...+.+...|..
T Consensus 9 a~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~----~~~v~~~~~D~~ 72 (191)
T 3dou_A 9 AAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------E----IAGVRFIRCDIF 72 (191)
T ss_dssp HHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------C----CTTCEEEECCTT
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------c----CCCeEEEEcccc
Confidence 56667777766555567899999999999999888888 6689999998741 1 135677777776
Q ss_pred CCCcchhhhhhcC----CCccEEEEccccCCCC-----------ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC
Q 009871 399 NRDHIEAIKEENN----EGFEVILGTDVSYIPE-----------AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ 463 (523)
Q Consensus 399 ~~~~~~~~~~~~~----~~fD~Ii~~d~~y~~~-----------~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~ 463 (523)
+......+..... ++||+|++.-...... ....+++.+.++| +|||.+++.... .
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~L---------kpGG~lv~k~~~-~ 142 (191)
T 3dou_A 73 KETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYL---------RNGGNVLLKQFQ-G 142 (191)
T ss_dssp SSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHE---------EEEEEEEEEEEC-S
T ss_pred CHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHc---------cCCCEEEEEEcC-C
Confidence 6433222222111 4899999853221111 1346677888899 679999876543 3
Q ss_pred CChhHHHHHHHHcCCEEEEEcCCCCC
Q 009871 464 VDEPSMLSAATQCGFRLVDKWPSKNS 489 (523)
Q Consensus 464 ~~~~~~~~~~~~~gf~~~~~~~~~~~ 489 (523)
.....+...++. .|.-..+..+.++
T Consensus 143 ~~~~~~~~~l~~-~F~~v~~~kP~as 167 (191)
T 3dou_A 143 DMTNDFIAIWRK-NFSSYKISKPPAS 167 (191)
T ss_dssp THHHHHHHHHGG-GEEEEEEECC---
T ss_pred CCHHHHHHHHHH-hcCEEEEECCCCc
Confidence 334556666644 4877777665333
No 309
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.08 E-value=3.6e-10 Score=104.99 Aligned_cols=105 Identities=16% Similarity=0.077 Sum_probs=80.1
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhcCC--CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhh
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAGSA--DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE 409 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~~~--~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~ 409 (523)
...++.+|||+|||+|.++..++..+. .+|+++|+++.+++.+++++..++.. ++.+...|.... ..
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~v~~~~~d~~~~--~~----- 142 (215)
T 2yxe_A 74 DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD----NVIVIVGDGTLG--YE----- 142 (215)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT----TEEEEESCGGGC--CG-----
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----CeEEEECCcccC--CC-----
Confidence 455788999999999988888888753 68999999999999999999887653 366655554221 10
Q ss_pred cCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 009871 410 NNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 462 (523)
Q Consensus 410 ~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r 462 (523)
..++||+|+++.++++.. +.+.++| +|||.+++.....
T Consensus 143 ~~~~fD~v~~~~~~~~~~------~~~~~~L---------~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 143 PLAPYDRIYTTAAGPKIP------EPLIRQL---------KDGGKLLMPVGRY 180 (215)
T ss_dssp GGCCEEEEEESSBBSSCC------HHHHHTE---------EEEEEEEEEESSS
T ss_pred CCCCeeEEEECCchHHHH------HHHHHHc---------CCCcEEEEEECCC
Confidence 135899999998877543 5778888 6799998887553
No 310
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.08 E-value=6.9e-11 Score=126.20 Aligned_cols=75 Identities=15% Similarity=0.205 Sum_probs=64.0
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
..+.+|||||||.|.++..|++. ++.|+|||+|+.+|+.|+.++...+ .+++|.+++++++ ...+.+++||+|+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEV--IAALEEGEFDLAIG 140 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHH--HHHCCTTSCSEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHH--hhhccCCCccEEEE
Confidence 45689999999999999999999 6789999999999999999876543 6899999999854 22345789999999
No 311
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.08 E-value=6.1e-10 Score=119.26 Aligned_cols=111 Identities=11% Similarity=0.070 Sum_probs=84.1
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCC--CEEEEEcCChHHHHHHHHHHHhcCC--CCCCCceEEEeeecCCCCcchhhhhh
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSA--DLVVATDGDSIALDLLAQNVTANLK--PPFLAKLITKRLEWGNRDHIEAIKEE 409 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~--~~V~~~D~~~~~l~~~~~n~~~n~~--~~~~~~v~~~~ldw~~~~~~~~~~~~ 409 (523)
.++.+|||||||+|.++..++..++ .+|+++|+++.|++.|++++..... .....++.+...|..+. +.
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dL-------p~ 792 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEF-------DS 792 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSC-------CT
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhC-------Cc
Confidence 3778999999999988888888873 6899999999999999987764311 11224677776665543 22
Q ss_pred cCCCccEEEEccccCCCCChH--HHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 410 NNEGFEVILGTDVSYIPEAIL--PLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 410 ~~~~fD~Ii~~d~~y~~~~~~--~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
..++||+|++.+++.+..... .+++.+.++| +|| .++++...
T Consensus 793 ~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvL---------KPG-~LIISTPN 836 (950)
T 3htx_A 793 RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLF---------HPK-LLIVSTPN 836 (950)
T ss_dssp TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTT---------CCS-EEEEEECB
T ss_pred ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHc---------CCC-EEEEEecC
Confidence 357899999999998866533 5889999999 678 77766543
No 312
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.08 E-value=2.1e-09 Score=107.87 Aligned_cols=140 Identities=8% Similarity=-0.038 Sum_probs=105.8
Q ss_pred HHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCC-EEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcc
Q 009871 325 AVLARNPTIVAGKKVLELGCGCGGICSMVAAGSAD-LVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 403 (523)
Q Consensus 325 ~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~-~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~ 403 (523)
..+....+.....+|||||||+|.++..++++.+. +++..|. |.+++.+++++...+ ..+|.+...|..+.
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~----~~rv~~~~gD~~~~--- 240 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE----EEQIDFQEGDFFKD--- 240 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEESCTTTS---
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc----cCceeeecCccccC---
Confidence 33444445556789999999999998888888654 8999998 899999998875433 36788888776543
Q ss_pred hhhhhhcCCCccEEEEccccCCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC------------------
Q 009871 404 EAIKEENNEGFEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ------------------ 463 (523)
Q Consensus 404 ~~~~~~~~~~fD~Ii~~d~~y~~~~--~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~------------------ 463 (523)
+...+|+|+...++++..+ ...+++.+.+.| +|||.++++...-.
T Consensus 241 ------~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al---------~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~ 305 (353)
T 4a6d_A 241 ------PLPEADLYILARVLHDWADGKCSHLLERIYHTC---------KPGGGILVIESLLDEDRRGPLLTQLYSLNMLV 305 (353)
T ss_dssp ------CCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHC---------CTTCEEEEEECCCCTTSCCCHHHHHHHHHHHH
T ss_pred ------CCCCceEEEeeeecccCCHHHHHHHHHHHHhhC---------CCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHH
Confidence 1346899999999988654 467899999999 77999998765311
Q ss_pred ------CChhHHHHHHHHcCCEEEEEcCCC
Q 009871 464 ------VDEPSMLSAATQCGFRLVDKWPSK 487 (523)
Q Consensus 464 ------~~~~~~~~~~~~~gf~~~~~~~~~ 487 (523)
.+..++.+.++++||+..++++..
T Consensus 306 ~~~g~ert~~e~~~ll~~AGf~~v~v~~~~ 335 (353)
T 4a6d_A 306 QTEGQERTPTHYHMLLSSAGFRDFQFKKTG 335 (353)
T ss_dssp SSSCCCCCHHHHHHHHHHHTCEEEEEECCS
T ss_pred hCCCcCCCHHHHHHHHHHCCCceEEEEEcC
Confidence 133567788899999999998853
No 313
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.08 E-value=2.6e-10 Score=110.57 Aligned_cols=119 Identities=14% Similarity=0.158 Sum_probs=87.2
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhh-CCCCEEEEEeCCHHHHHHHHhccccC----CCcEEEEEeeccCCccCCCCCC
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFT----ETRVSTFVCDLISDDLSRQISP 144 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~gvD~S~~~l~~a~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~ 144 (523)
.+...++.+|||+|||+|.++..+++. .|+.+|+|+|+|+.+++.|+++.... ..++++.++|+.+. ++++
T Consensus 94 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~----~~~~ 169 (280)
T 1i9g_A 94 EGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS----ELPD 169 (280)
T ss_dssp HTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC----CCCT
T ss_pred HcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc----CCCC
Confidence 344467889999999999999999986 66789999999999999999976433 36799999999876 5567
Q ss_pred CceeEEEEc-----cccccceeeecceEEecCCeEEEee-CHH---HHHHHHHh-CCCcEEEE
Q 009871 145 SSIDIVTME-----RLTGKDQKISENFYVRGDGTRAFYF-SND---FLTSLFKE-NGFDVEEL 197 (523)
Q Consensus 145 ~~fD~V~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~-~~~---~l~~ll~~-~Gf~~~~~ 197 (523)
++||+|++. .++....+ .++++|.++++. +.+ ++...+.+ .||...+.
T Consensus 170 ~~~D~v~~~~~~~~~~l~~~~~-----~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~~~~~ 227 (280)
T 1i9g_A 170 GSVDRAVLDMLAPWEVLDAVSR-----LLVAGGVLMVYVATVTQLSRIVEALRAKQCWTEPRA 227 (280)
T ss_dssp TCEEEEEEESSCGGGGHHHHHH-----HEEEEEEEEEEESSHHHHHHHHHHHHHHSSBCCCEE
T ss_pred CceeEEEECCcCHHHHHHHHHH-----hCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcCCcEE
Confidence 889999981 22222222 577888876644 333 34445555 78875443
No 314
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.08 E-value=9.2e-11 Score=110.58 Aligned_cols=76 Identities=12% Similarity=0.248 Sum_probs=64.1
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCC-CCCCceeEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQ-ISPSSIDIV 150 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~-~~~~~fD~V 150 (523)
.++.+|||||||+|..+..+++..++.+|+|+|+|+.|++.|+++....+ .+++++++|+.+. + + ..+++||+|
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--~~~~~~~fD~V 146 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQ-F--ENVNDKVYDMI 146 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC-H--HHHTTSCEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH-H--HhhccCCccEE
Confidence 46789999999999999999997778999999999999999999765433 4799999999754 1 1 226789999
Q ss_pred EE
Q 009871 151 TM 152 (523)
Q Consensus 151 ~~ 152 (523)
++
T Consensus 147 ~~ 148 (232)
T 3ntv_A 147 FI 148 (232)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 315
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.08 E-value=4.5e-10 Score=105.54 Aligned_cols=102 Identities=16% Similarity=0.102 Sum_probs=78.5
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
...++.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++++..++ ++.+...|..+. . ...
T Consensus 67 ~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~------~v~~~~~d~~~~--~-----~~~ 132 (231)
T 1vbf_A 67 DLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN------NIKLILGDGTLG--Y-----EEE 132 (231)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS------SEEEEESCGGGC--C-----GGG
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC------CeEEEECCcccc--c-----ccC
Confidence 44578899999999998888888876 789999999999999999987653 456665555431 1 024
Q ss_pred CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 009871 412 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 462 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r 462 (523)
++||+|++..++++.. ..+.++| +|||.+++.....
T Consensus 133 ~~fD~v~~~~~~~~~~------~~~~~~L---------~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 133 KPYDRVVVWATAPTLL------CKPYEQL---------KEGGIMILPIGVG 168 (231)
T ss_dssp CCEEEEEESSBBSSCC------HHHHHTE---------EEEEEEEEEECSS
T ss_pred CCccEEEECCcHHHHH------HHHHHHc---------CCCcEEEEEEcCC
Confidence 6899999998887543 4677888 6799998887653
No 316
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.08 E-value=1e-10 Score=114.84 Aligned_cols=123 Identities=15% Similarity=0.178 Sum_probs=87.5
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccc-----cCCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKD-----FTETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
+++.+|||||||+|..+..+++..+..+|+|+|+|+.|++.|+++.. ....+++++++|+.+... ..++++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~--~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVR--QTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH--SSCTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHH--hccCCcee
Confidence 56789999999999999999988667799999999999999998752 134689999999975411 11467899
Q ss_pred EEEEccccc--cceee------ec-ceEEecCCeEEEee--------CHHHHHHHHHhCCCcEEEEE
Q 009871 149 IVTMERLTG--KDQKI------SE-NFYVRGDGTRAFYF--------SNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 149 ~V~~~~~~~--~~~~~------~~-~~~~~~~g~~~~~~--------~~~~l~~ll~~~Gf~~~~~~ 198 (523)
+|++..... +...+ .. ...++++|.++... ..+++.+.++++||..+...
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEE
Confidence 999911100 00000 00 12577888877631 35678889999999976553
No 317
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.08 E-value=2.6e-10 Score=114.45 Aligned_cols=118 Identities=14% Similarity=0.228 Sum_probs=84.2
Q ss_pred CCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCceeEEEE-
Q 009871 76 RKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDIVTM- 152 (523)
Q Consensus 76 ~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~- 152 (523)
+.+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+++.... ..+++++.+|+.+.. ++.++.||+|++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDAR---NFEGGAADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGG---GGTTCCEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCc---ccCCCCccEEEEe
Confidence 78999999999999999999999999999999 88999999875432 247999999998652 123567999999
Q ss_pred ------------------ccccccceeeecceEEecC-Ce-E----------------EEeeCHHHHHHHHHhCCCcEEE
Q 009871 153 ------------------ERLTGKDQKISENFYVRGD-GT-R----------------AFYFSNDFLTSLFKENGFDVEE 196 (523)
Q Consensus 153 ------------------~~~~~~~~~~~~~~~~~~~-g~-~----------------~~~~~~~~l~~ll~~~Gf~~~~ 196 (523)
.+.+++++++.-.....++ +. . ...++.+++.++|+++||.+++
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 256 DCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred cccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceee
Confidence 2222333333211111111 00 0 0124789999999999999877
Q ss_pred E
Q 009871 197 L 197 (523)
Q Consensus 197 ~ 197 (523)
.
T Consensus 336 ~ 336 (352)
T 3mcz_A 336 R 336 (352)
T ss_dssp E
T ss_pred e
Confidence 3
No 318
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.08 E-value=2.6e-10 Score=109.41 Aligned_cols=110 Identities=15% Similarity=0.105 Sum_probs=81.2
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCc
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDH 402 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~ 402 (523)
+.+++..... ++.+|||||||+|.++..++..+ .+|+++|+|+.+++.++++... . +...|..+.
T Consensus 44 ~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~--------~--~~~~d~~~~-- 108 (260)
T 2avn_A 44 IGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQERG-FEVVLVDPSKEMLEVAREKGVK--------N--VVEAKAEDL-- 108 (260)
T ss_dssp HHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTTT-CEEEEEESCHHHHHHHHHHTCS--------C--EEECCTTSC--
T ss_pred HHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcC-CeEEEEeCCHHHHHHHHhhcCC--------C--EEECcHHHC--
Confidence 3445544332 67899999999998888888775 5899999999999999887431 1 333333321
Q ss_pred chhhhhhcCCCccEEEEccccC-CCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 403 IEAIKEENNEGFEVILGTDVSY-IPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~~y-~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
++++++||+|++..+++ .......+++.+.++| +|||.+++....
T Consensus 109 -----~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~l~~~~~~ 154 (260)
T 2avn_A 109 -----PFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVL---------VPDGLLIATVDN 154 (260)
T ss_dssp -----CSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHE---------EEEEEEEEEEEB
T ss_pred -----CCCCCCEEEEEEcchhhhccccHHHHHHHHHHHc---------CCCeEEEEEeCC
Confidence 23456899999987554 3466999999999999 679999987655
No 319
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.07 E-value=2e-10 Score=107.48 Aligned_cols=108 Identities=11% Similarity=0.052 Sum_probs=82.4
Q ss_pred CCCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
.++.+|||||||+|..+..++... ..+|+++|+++.+++.+++|+..++.. .++.+...|..+. +..+..
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-----~~~~~~ 134 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS---DKIGLRLSPAKDT-----LAELIH 134 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT---TTEEEEESCHHHH-----HHHHHT
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC---CceEEEeCCHHHH-----HHHhhh
Confidence 367799999999998888888763 569999999999999999999998775 4577765544221 111211
Q ss_pred ----CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 412 ----EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 412 ----~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
++||+|+.. ........+++.+.++| +|||.+++....
T Consensus 135 ~~~~~~fD~v~~~---~~~~~~~~~l~~~~~~L---------~pgG~lv~~~~~ 176 (225)
T 3tr6_A 135 AGQAWQYDLIYID---ADKANTDLYYEESLKLL---------REGGLIAVDNVL 176 (225)
T ss_dssp TTCTTCEEEEEEC---SCGGGHHHHHHHHHHHE---------EEEEEEEEECSS
T ss_pred ccCCCCccEEEEC---CCHHHHHHHHHHHHHhc---------CCCcEEEEeCCC
Confidence 689999964 23556788999999999 679999886554
No 320
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.07 E-value=2e-11 Score=114.96 Aligned_cols=119 Identities=18% Similarity=0.308 Sum_probs=72.1
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEE-EeeccC---CccCC-CCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTF-VCDLIS---DDLSR-QISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~-~~d~~~---~~~~~-~~~~~~fD 148 (523)
..+.+|||||||+|.++..+++.+ ..+|+|+|+|+.|++.|+++.. ++... ..++.. .+++. .+...+||
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~~~~D 110 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDE----RVVVMEQFNFRNAVLADFEQGRPSFTSID 110 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCT----TEEEECSCCGGGCCGGGCCSCCCSEEEEC
T ss_pred CCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCc----cccccccceEEEeCHhHcCcCCCCEEEEE
Confidence 456799999999999999999883 2489999999999999887542 11111 111211 11111 12345677
Q ss_pred EEEE---------ccccccceeeecceEEec-----------CCe----EEEeeCHHHHHHHHHhCCCcEEEEEe
Q 009871 149 IVTM---------ERLTGKDQKISENFYVRG-----------DGT----RAFYFSNDFLTSLFKENGFDVEELGL 199 (523)
Q Consensus 149 ~V~~---------~~~~~~~~~~~~~~~~~~-----------~g~----~~~~~~~~~l~~ll~~~Gf~~~~~~~ 199 (523)
++++ .+++++++.+.- ..++ .|. ..+..+.+++.++++++||.+..+..
T Consensus 111 ~v~~~l~~~l~~i~rvLkpgG~lv~--~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 111 VSFISLDLILPPLYEILEKNGEVAA--LIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTF 183 (232)
T ss_dssp CSSSCGGGTHHHHHHHSCTTCEEEE--EECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred EEhhhHHHHHHHHHHhccCCCEEEE--EECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEE
Confidence 7766 333444444321 0000 010 01123667899999999999877654
No 321
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.07 E-value=5.6e-10 Score=111.22 Aligned_cols=120 Identities=18% Similarity=0.186 Sum_probs=84.9
Q ss_pred cCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCceeE
Q 009871 72 SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDI 149 (523)
Q Consensus 72 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~ 149 (523)
+... .+|||||||+|..+..+++.+|+.+++++|+ +.|++.|+++.... ..+++++.+|+.+ +++ ++||+
T Consensus 165 ~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~~-~~~D~ 236 (334)
T 2ip2_A 165 DFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-----EVP-SNGDI 236 (334)
T ss_dssp CCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-----CCC-SSCSE
T ss_pred CCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-----CCC-CCCCE
Confidence 3344 8999999999999999999999999999999 99999999875322 3579999999975 233 57999
Q ss_pred EEE-------------------ccccccceeeecceEEecC-CeE---------------EEeeCHHHHHHHHHhCCCcE
Q 009871 150 VTM-------------------ERLTGKDQKISENFYVRGD-GTR---------------AFYFSNDFLTSLFKENGFDV 194 (523)
Q Consensus 150 V~~-------------------~~~~~~~~~~~~~~~~~~~-g~~---------------~~~~~~~~l~~ll~~~Gf~~ 194 (523)
|++ .+.+++++.+.-.....++ +.. -..++.+++.++++++||.+
T Consensus 237 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 316 (334)
T 2ip2_A 237 YLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAV 316 (334)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEE
T ss_pred EEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCce
Confidence 999 1222333332211011111 000 01247899999999999998
Q ss_pred EEEEe
Q 009871 195 EELGL 199 (523)
Q Consensus 195 ~~~~~ 199 (523)
+++..
T Consensus 317 ~~~~~ 321 (334)
T 2ip2_A 317 ERIVD 321 (334)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 77653
No 322
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.07 E-value=5e-10 Score=112.78 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=86.1
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCcee
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
++..++.+|||||||+|..+..+++.+|+.+++++|+ +.|++.|+++.... ..+++++++|+.+ +++. .||
T Consensus 179 ~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~~~-~~D 251 (360)
T 1tw3_A 179 YDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-----PLPR-KAD 251 (360)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-----CCSS-CEE
T ss_pred CCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-----CCCC-Ccc
Confidence 3445678999999999999999999999999999999 99999999876432 2479999999974 2333 499
Q ss_pred EEEE-------------------ccccccceeeecceEE-ecCCe-E---------------EEeeCHHHHHHHHHhCCC
Q 009871 149 IVTM-------------------ERLTGKDQKISENFYV-RGDGT-R---------------AFYFSNDFLTSLFKENGF 192 (523)
Q Consensus 149 ~V~~-------------------~~~~~~~~~~~~~~~~-~~~g~-~---------------~~~~~~~~l~~ll~~~Gf 192 (523)
+|++ .+.+++++.+.-.... .++.. . ...++.+++.++|+++||
T Consensus 252 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 331 (360)
T 1tw3_A 252 AIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGL 331 (360)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTE
T ss_pred EEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCC
Confidence 9999 1222333332210001 01100 0 012478999999999999
Q ss_pred cEEEEEeE
Q 009871 193 DVEELGLC 200 (523)
Q Consensus 193 ~~~~~~~~ 200 (523)
+++++...
T Consensus 332 ~~~~~~~~ 339 (360)
T 1tw3_A 332 VVEEVRQL 339 (360)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEeC
Confidence 98877543
No 323
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.07 E-value=7.8e-10 Score=110.27 Aligned_cols=155 Identities=15% Similarity=0.149 Sum_probs=84.5
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhh-CCCCEEEEEeCCHHHHHHHHhcccc------------CCCcEEEEEeeccCC
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDF------------TETRVSTFVCDLISD 136 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~gvD~S~~~l~~a~~~~~~------------~~~~v~~~~~d~~~~ 136 (523)
.+...++.+|||+|||+|.++..+++. ++..+|+|+|+|+.+++.|+++... ...++++.++|+.+.
T Consensus 100 ~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~ 179 (336)
T 2b25_A 100 MMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGA 179 (336)
T ss_dssp HHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCC
T ss_pred hcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHc
Confidence 344567889999999999999999998 6778999999999999999997642 125799999999864
Q ss_pred ccCCCCCCCceeEEEEc-----cccccceeeecceEEecCCeEEEee-CHHHHHHHHH---h--CCCcEEEEEeEeeeee
Q 009871 137 DLSRQISPSSIDIVTME-----RLTGKDQKISENFYVRGDGTRAFYF-SNDFLTSLFK---E--NGFDVEELGLCCKQVE 205 (523)
Q Consensus 137 ~~~~~~~~~~fD~V~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~l~~ll~---~--~Gf~~~~~~~~~~~~~ 205 (523)
. .++++++||+|++. .++....+ .++++|.++.+. +.+++..+++ + .+|....+..
T Consensus 180 ~--~~~~~~~fD~V~~~~~~~~~~l~~~~~-----~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------ 246 (336)
T 2b25_A 180 T--EDIKSLTFDAVALDMLNPHVTLPVFYP-----HLKHGGVCAVYVVNITQVIELLDGIRTCELALSCEKISE------ 246 (336)
T ss_dssp C---------EEEEEECSSSTTTTHHHHGG-----GEEEEEEEEEEESSHHHHHHHHHHHHHHTCCEEEEEEEC------
T ss_pred c--cccCCCCeeEEEECCCCHHHHHHHHHH-----hcCCCcEEEEEeCCHHHHHHHHHHHHhcCCCcccceEEE------
Confidence 1 13456789999981 11122222 577888877543 4555554444 3 3343322110
Q ss_pred ecccCccceeEEEEEEEEecCCCCCCccccchhhhhccccc
Q 009871 206 NRARELVMNRRWVQAVFCSSGGATSSSEEASVRVDIFNQAI 246 (523)
Q Consensus 206 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (523)
...+.|.....++..+ .+...+-++||...++
T Consensus 247 ------~~~~~w~~~~~~~~~g---~y~~~l~~aGF~~v~~ 278 (336)
T 2b25_A 247 ------VIVRDWLVCLAKQKNG---ILAQKVESKINTDVQL 278 (336)
T ss_dssp ------CCCCCEEECC-------------------------
T ss_pred ------ecccceEEEeeccccc---chhhhhcccccccccc
Confidence 1124455444443332 3434566677777665
No 324
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.06 E-value=7e-11 Score=109.46 Aligned_cols=65 Identities=17% Similarity=0.101 Sum_probs=57.2
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCC-EEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDV-FVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
++.+|||||||+|..+..+ +. +|+|+|+|+.|++.|+++. .++.+.++|+.++ ++++++||+|++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~----~~~~~~fD~v~~ 101 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEAL----PFPGESFDVVLL 101 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSC----CSCSSCEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccC----CCCCCcEEEEEE
Confidence 6789999999999998776 34 7999999999999999875 5688999999877 677889999999
No 325
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.06 E-value=5.9e-10 Score=110.18 Aligned_cols=110 Identities=16% Similarity=0.041 Sum_probs=82.7
Q ss_pred HHhcCCCCCCCCeEEEECCCccHHHHHHHhcCC--CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcc
Q 009871 326 VLARNPTIVAGKKVLELGCGCGGICSMVAAGSA--DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 403 (523)
Q Consensus 326 ~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~--~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~ 403 (523)
.+.......++.+|||+|||+|.++..++..++ .+|+++|+++.+++.+++|+..++.. ++.+...|..+..
T Consensus 66 ~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~----~v~~~~~d~~~~~-- 139 (317)
T 1dl5_A 66 LFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE----NVIFVCGDGYYGV-- 139 (317)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC----SEEEEESCGGGCC--
T ss_pred HHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CeEEEECChhhcc--
Confidence 333333455788999999999988888887753 47999999999999999999987764 3677666654321
Q ss_pred hhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 404 EAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 404 ~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
...++||+|++..++.+.. +.+.++| +|||.+++....
T Consensus 140 -----~~~~~fD~Iv~~~~~~~~~------~~~~~~L---------kpgG~lvi~~~~ 177 (317)
T 1dl5_A 140 -----PEFSPYDVIFVTVGVDEVP------ETWFTQL---------KEGGRVIVPINL 177 (317)
T ss_dssp -----GGGCCEEEEEECSBBSCCC------HHHHHHE---------EEEEEEEEEBCB
T ss_pred -----ccCCCeEEEEEcCCHHHHH------HHHHHhc---------CCCcEEEEEECC
Confidence 1135899999998876543 5778899 679999887543
No 326
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.05 E-value=3.7e-10 Score=112.73 Aligned_cols=113 Identities=12% Similarity=0.114 Sum_probs=80.1
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHH-------hcCCCCCCCceEEEeeecCCCCcc
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVT-------ANLKPPFLAKLITKRLEWGNRDHI 403 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~-------~n~~~~~~~~v~~~~ldw~~~~~~ 403 (523)
.+.++.+|||||||+|.++..+|.. ++.+|+|+|+++.+++.|++|++ .+++. ..++.+...|..+.. .
T Consensus 170 ~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~--~~rVefi~GD~~~lp-~ 246 (438)
T 3uwp_A 170 KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK--HAEYTLERGDFLSEE-W 246 (438)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC--CCEEEEEECCTTSHH-H
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC--CCCeEEEECcccCCc-c
Confidence 4557889999999999888888765 55579999999999999988763 33432 146777766654421 1
Q ss_pred hhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 404 EAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 404 ~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
.. .+ ..||+|+++.+++ .......+..+.+.| +|||.++++...
T Consensus 247 ~d--~~--~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvL---------KPGGrIVssE~f 290 (438)
T 3uwp_A 247 RE--RI--ANTSVIFVNNFAF-GPEVDHQLKERFANM---------KEGGRIVSSKPF 290 (438)
T ss_dssp HH--HH--HTCSEEEECCTTC-CHHHHHHHHHHHTTS---------CTTCEEEESSCS
T ss_pred cc--cc--CCccEEEEccccc-CchHHHHHHHHHHcC---------CCCcEEEEeecc
Confidence 00 01 3799999987655 445556666777778 789999876544
No 327
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.05 E-value=1.8e-09 Score=106.55 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=61.3
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc--------CCCcEEEEEeeccCCccCCCCC--C
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF--------TETRVSTFVCDLISDDLSRQIS--P 144 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~--------~~~~v~~~~~d~~~~~~~~~~~--~ 144 (523)
++.+|||||||+|.++..+++. +..+|+|+|+|+.|++.|+++... ...+++++++|+..+.+..+++ +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 6789999999999999999875 467899999999999999987532 2247899999998764322243 4
Q ss_pred CceeEEEE
Q 009871 145 SSIDIVTM 152 (523)
Q Consensus 145 ~~fD~V~~ 152 (523)
++||+|++
T Consensus 113 ~~fD~V~~ 120 (313)
T 3bgv_A 113 MCFDICSC 120 (313)
T ss_dssp CCEEEEEE
T ss_pred CCEEEEEE
Confidence 59999999
No 328
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.05 E-value=2.7e-10 Score=112.44 Aligned_cols=114 Identities=18% Similarity=0.128 Sum_probs=83.5
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCC---CCCCceEEEeeecCCCCcchhhhhh--
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKP---PFLAKLITKRLEWGNRDHIEAIKEE-- 409 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~---~~~~~v~~~~ldw~~~~~~~~~~~~-- 409 (523)
++.+|||||||+|.++..+++.+..+|+++|+++.|++.++++...+... ....++.+...|..+..... ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~---~~~~ 110 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLID---KFRD 110 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTT---TCSS
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhh---hccc
Confidence 66799999999998888888776779999999999999999988764210 01135667666665432100 12
Q ss_pred cCCCccEEEEccccCCC-C---ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 009871 410 NNEGFEVILGTDVSYIP-E---AILPLFATAKELTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 410 ~~~~fD~Ii~~d~~y~~-~---~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
..++||+|+++.++++. + ....+++.+.++| +|||.++++..
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L---------kpgG~li~~~~ 156 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFESYEQADMMLRNACERL---------SPGGYFIGTTP 156 (313)
T ss_dssp TTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTE---------EEEEEEEEEEE
T ss_pred CCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHh---------CCCcEEEEecC
Confidence 23489999999988765 3 3568889999999 67999988765
No 329
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.05 E-value=3.6e-10 Score=109.19 Aligned_cols=78 Identities=22% Similarity=0.244 Sum_probs=61.5
Q ss_pred CCCCeEEEECCCc---cccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccC-------CCCC
Q 009871 74 AGRKDVLEVGCGA---GNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLS-------RQIS 143 (523)
Q Consensus 74 ~~~~~iLDiGcG~---G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-------~~~~ 143 (523)
....+|||||||+ |..+..+.+.+|+.+|+|+|+|+.|++.|+++... ..+++++++|+.+.+.. ..++
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-DPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-CTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-CCCeEEEEeeCCCchhhhccchhhccCC
Confidence 3457999999999 99887777778889999999999999999997632 36799999999753210 0133
Q ss_pred CCceeEEEE
Q 009871 144 PSSIDIVTM 152 (523)
Q Consensus 144 ~~~fD~V~~ 152 (523)
..+||+|++
T Consensus 155 ~~~~d~v~~ 163 (274)
T 2qe6_A 155 FSRPAAIML 163 (274)
T ss_dssp TTSCCEEEE
T ss_pred CCCCEEEEE
Confidence 358999998
No 330
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.05 E-value=3.2e-10 Score=113.66 Aligned_cols=119 Identities=16% Similarity=0.158 Sum_probs=81.0
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccc--cCCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKD--FTETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
++..+..+|||||||+|..+..+++++|+.+++++|+ +.++. +++.. ....+++++.+|+. . +++ +||
T Consensus 180 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~-~----~~p--~~D 249 (348)
T 3lst_A 180 GDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFL-R----EVP--HAD 249 (348)
T ss_dssp SCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTT-T----CCC--CCS
T ss_pred CCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCC-C----CCC--CCc
Confidence 3445678999999999999999999999999999999 45555 33322 22467999999996 3 344 899
Q ss_pred EEEE-------------------ccccccceeeecceEEecCC-eEE---------------EeeCHHHHHHHHHhCCCc
Q 009871 149 IVTM-------------------ERLTGKDQKISENFYVRGDG-TRA---------------FYFSNDFLTSLFKENGFD 193 (523)
Q Consensus 149 ~V~~-------------------~~~~~~~~~~~~~~~~~~~g-~~~---------------~~~~~~~l~~ll~~~Gf~ 193 (523)
+|++ .+.+++++++.-.....++. ... ..++.+++.++++++||+
T Consensus 250 ~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~ 329 (348)
T 3lst_A 250 VHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLR 329 (348)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEE
T ss_pred EEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCc
Confidence 9999 22234444332110111110 000 024789999999999999
Q ss_pred EEEEEe
Q 009871 194 VEELGL 199 (523)
Q Consensus 194 ~~~~~~ 199 (523)
++++..
T Consensus 330 ~~~~~~ 335 (348)
T 3lst_A 330 LDRVVG 335 (348)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 887753
No 331
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.05 E-value=7.8e-10 Score=105.14 Aligned_cols=106 Identities=13% Similarity=0.035 Sum_probs=80.9
Q ss_pred CCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhh---
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE--- 409 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~--- 409 (523)
++++|||||||+|..+..++... ..+|+++|+++.+++.+++|+..+++. .++.+...|..+ .+..+
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~---~~i~~~~gda~~-----~l~~l~~~ 150 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD---HKIDFREGPALP-----VLDEMIKD 150 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG---GGEEEEESCHHH-----HHHHHHHS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CCeEEEECCHHH-----HHHHHHhc
Confidence 56799999999998888887763 469999999999999999999987763 467666544321 11112
Q ss_pred --cCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 009871 410 --NNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 410 --~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
..++||+|++. ........+++.+.++| +|||.+++...
T Consensus 151 ~~~~~~fD~V~~d---~~~~~~~~~l~~~~~~L---------kpGG~lv~d~~ 191 (247)
T 1sui_A 151 EKNHGSYDFIFVD---ADKDNYLNYHKRLIDLV---------KVGGVIGYDNT 191 (247)
T ss_dssp GGGTTCBSEEEEC---SCSTTHHHHHHHHHHHB---------CTTCCEEEECT
T ss_pred cCCCCCEEEEEEc---CchHHHHHHHHHHHHhC---------CCCeEEEEecC
Confidence 14689999985 23567889999999999 77999887543
No 332
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.04 E-value=4.3e-10 Score=105.70 Aligned_cols=79 Identities=14% Similarity=0.093 Sum_probs=64.7
Q ss_pred HhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCc
Q 009871 67 WGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSS 146 (523)
Q Consensus 67 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 146 (523)
+.+.+...++.+|||||||+|..+..+++.+ .+|+|+|+|+.|++.|+++....+ +++++++|+.+. ...+++
T Consensus 62 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~----~~~~~~ 134 (231)
T 1vbf_A 62 MLDELDLHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLG----YEEEKP 134 (231)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGC----CGGGCC
T ss_pred HHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcccc----cccCCC
Confidence 3344455678899999999999999999885 689999999999999999865443 799999999863 224578
Q ss_pred eeEEEE
Q 009871 147 IDIVTM 152 (523)
Q Consensus 147 fD~V~~ 152 (523)
||+|++
T Consensus 135 fD~v~~ 140 (231)
T 1vbf_A 135 YDRVVV 140 (231)
T ss_dssp EEEEEE
T ss_pred ccEEEE
Confidence 999998
No 333
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.04 E-value=2.1e-09 Score=110.85 Aligned_cols=143 Identities=15% Similarity=0.099 Sum_probs=96.7
Q ss_pred HHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCC
Q 009871 320 AHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGN 399 (523)
Q Consensus 320 a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~ 399 (523)
+..+.+++.......++.+|||||||+|.++..++.. ..+|+++|+|+.+++.|++|+..|++. ++.+...|+.+
T Consensus 271 ~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~----~v~f~~~d~~~ 345 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ----NVTFYHENLEE 345 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC----SEEEEECCTTS
T ss_pred HHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC----ceEEEECCHHH
Confidence 4445555544333446789999999999998888887 568999999999999999999998763 57787777765
Q ss_pred CCcchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCCE
Q 009871 400 RDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGFR 479 (523)
Q Consensus 400 ~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~ 479 (523)
... . .++...+||+|++ |.-|... ..+++.+.. + +|++.+|++..... ...-...+.+.||+
T Consensus 346 ~l~--~-~~~~~~~fD~Vv~-dPPr~g~--~~~~~~l~~-~---------~p~~ivyvsc~p~t--lard~~~l~~~Gy~ 407 (433)
T 1uwv_A 346 DVT--K-QPWAKNGFDKVLL-DPARAGA--AGVMQQIIK-L---------EPIRIVYVSCNPAT--LARDSEALLKAGYT 407 (433)
T ss_dssp CCS--S-SGGGTTCCSEEEE-CCCTTCC--HHHHHHHHH-H---------CCSEEEEEESCHHH--HHHHHHHHHHTTCE
T ss_pred Hhh--h-hhhhcCCCCEEEE-CCCCccH--HHHHHHHHh-c---------CCCeEEEEECChHH--HHhhHHHHHHCCcE
Confidence 311 0 0133468999998 4444432 356665554 3 46788877653321 12224455678999
Q ss_pred EEEEcC
Q 009871 480 LVDKWP 485 (523)
Q Consensus 480 ~~~~~~ 485 (523)
+..+..
T Consensus 408 ~~~~~~ 413 (433)
T 1uwv_A 408 IARLAM 413 (433)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 988643
No 334
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.04 E-value=2.3e-10 Score=115.47 Aligned_cols=80 Identities=20% Similarity=0.288 Sum_probs=67.1
Q ss_pred hhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC----CcEEEEEeeccCCccCCCCC
Q 009871 68 GRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE----TRVSTFVCDLISDDLSRQIS 143 (523)
Q Consensus 68 ~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~~~~~ 143 (523)
.+.++...+.+|||+|||+|.++..+++.+|+.+|+|+|+|+.|++.|+++...++ .++++.++|+.+ +++
T Consensus 215 l~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-----~~~ 289 (375)
T 4dcm_A 215 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-----GVE 289 (375)
T ss_dssp HHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-----TCC
T ss_pred HHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-----cCC
Confidence 34455455689999999999999999999989999999999999999999765432 358999999975 356
Q ss_pred CCceeEEEE
Q 009871 144 PSSIDIVTM 152 (523)
Q Consensus 144 ~~~fD~V~~ 152 (523)
+++||+|++
T Consensus 290 ~~~fD~Ii~ 298 (375)
T 4dcm_A 290 PFRFNAVLC 298 (375)
T ss_dssp TTCEEEEEE
T ss_pred CCCeeEEEE
Confidence 789999999
No 335
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.04 E-value=8.1e-10 Score=112.53 Aligned_cols=112 Identities=15% Similarity=0.113 Sum_probs=80.4
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHH-------HHHHHhcCCCCCCCceEEEee-ecCCCCc
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLL-------AQNVTANLKPPFLAKLITKRL-EWGNRDH 402 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~-------~~n~~~n~~~~~~~~v~~~~l-dw~~~~~ 402 (523)
...++.+|||||||+|.++..++.. ++.+|+++|+++.+++.| +.|+..+++. ..++.+... ++...
T Consensus 239 ~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~--~~nV~~i~gD~~~~~-- 314 (433)
T 1u2z_A 239 QLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR--LNNVEFSLKKSFVDN-- 314 (433)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC--CCCEEEEESSCSTTC--
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC--CCceEEEEcCccccc--
Confidence 4557889999999999988888886 556899999999999988 8898887642 134555432 12111
Q ss_pred chhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEE
Q 009871 403 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCH 459 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~ 459 (523)
..+.. ...+||+|+++.+++. ..+...++.+.+.| +|||.+++..
T Consensus 315 -~~~~~-~~~~FDvIvvn~~l~~-~d~~~~L~el~r~L---------KpGG~lVi~d 359 (433)
T 1u2z_A 315 -NRVAE-LIPQCDVILVNNFLFD-EDLNKKVEKILQTA---------KVGCKIISLK 359 (433)
T ss_dssp -HHHHH-HGGGCSEEEECCTTCC-HHHHHHHHHHHTTC---------CTTCEEEESS
T ss_pred -ccccc-ccCCCCEEEEeCcccc-ccHHHHHHHHHHhC---------CCCeEEEEee
Confidence 00100 1358999999877743 55677778888888 7799998864
No 336
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.04 E-value=1.5e-09 Score=100.07 Aligned_cols=116 Identities=20% Similarity=0.250 Sum_probs=78.8
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
..++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.|++.|+++....+.+++++++|+.++ +++||+|++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~-------~~~~D~v~~ 118 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-------NSRVDIVIM 118 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-------CCCCSEEEE
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHc-------CCCCCEEEE
Confidence 3467899999999999999999884 24799999999999999998754444799999999865 248999999
Q ss_pred -cccc--ccc--ee-eecce-EEecCCeEEEee----CHHHHHHHHHhCCCcEEEEE
Q 009871 153 -ERLT--GKD--QK-ISENF-YVRGDGTRAFYF----SNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 153 -~~~~--~~~--~~-~~~~~-~~~~~g~~~~~~----~~~~l~~ll~~~Gf~~~~~~ 198 (523)
..+. ... .. +.... .+ ++...... +.+.+.+.+.+.||....+.
T Consensus 119 ~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 173 (207)
T 1wy7_A 119 NPPFGSQRKHADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTHRL 173 (207)
T ss_dssp CCCCSSSSTTTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEEEE
T ss_pred cCCCccccCCchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEEEE
Confidence 1110 000 00 00000 11 22222221 24567788899999875554
No 337
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.03 E-value=4.6e-10 Score=105.75 Aligned_cols=106 Identities=12% Similarity=0.052 Sum_probs=81.4
Q ss_pred CCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc-C
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN-N 411 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~-~ 411 (523)
.++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++|+..++.. .++.+...|..+. . .... +
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~--~---~~~~~~ 124 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLE---SRIELLFGDALQL--G---EKLELY 124 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCT---TTEEEECSCGGGS--H---HHHTTS
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEECCHHHH--H---HhcccC
Confidence 367799999999998888888774 469999999999999999999988764 4566665554321 1 1111 4
Q ss_pred CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEE
Q 009871 412 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCH 459 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~ 459 (523)
++||+|++.... .....+++.+.++| +|||.+++..
T Consensus 125 ~~fD~I~~~~~~---~~~~~~l~~~~~~L---------~pgG~lv~~~ 160 (233)
T 2gpy_A 125 PLFDVLFIDAAK---GQYRRFFDMYSPMV---------RPGGLILSDN 160 (233)
T ss_dssp CCEEEEEEEGGG---SCHHHHHHHHGGGE---------EEEEEEEEET
T ss_pred CCccEEEECCCH---HHHHHHHHHHHHHc---------CCCeEEEEEc
Confidence 689999986443 46788999999999 6799998863
No 338
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.03 E-value=9.4e-10 Score=109.67 Aligned_cols=133 Identities=11% Similarity=0.071 Sum_probs=86.4
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhc-CC-CEEEEEcCChHHHHHHHHHHHh-------cCCCCCCCceEEEeeecCCCCc
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAG-SA-DLVVATDGDSIALDLLAQNVTA-------NLKPPFLAKLITKRLEWGNRDH 402 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~-~~-~~V~~~D~~~~~l~~~~~n~~~-------n~~~~~~~~v~~~~ldw~~~~~ 402 (523)
...++.+|||+|||+|.++..++.. ++ .+|+++|+++.+++.|++|+.. |+......++.+...|..+..
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~- 180 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT- 180 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc-
Confidence 3457889999999999998888886 55 6999999999999999999984 433222246777666654421
Q ss_pred chhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHH--cCCEE
Q 009871 403 IEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQ--CGFRL 480 (523)
Q Consensus 403 ~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~--~gf~~ 480 (523)
.++..++||+|++.- .....+++.+.++| +|||.+++..... .....+++.+++ .+|..
T Consensus 181 ----~~~~~~~fD~V~~~~-----~~~~~~l~~~~~~L---------kpgG~lv~~~~~~-~~~~~~~~~l~~~~~~~~~ 241 (336)
T 2b25_A 181 ----EDIKSLTFDAVALDM-----LNPHVTLPVFYPHL---------KHGGVCAVYVVNI-TQVIELLDGIRTCELALSC 241 (336)
T ss_dssp -----------EEEEEECS-----SSTTTTHHHHGGGE---------EEEEEEEEEESSH-HHHHHHHHHHHHHTCCEEE
T ss_pred ----cccCCCCeeEEEECC-----CCHHHHHHHHHHhc---------CCCcEEEEEeCCH-HHHHHHHHHHHhcCCCccc
Confidence 122345799999842 22334788889999 6799988765431 122234454443 34444
Q ss_pred EEEc
Q 009871 481 VDKW 484 (523)
Q Consensus 481 ~~~~ 484 (523)
..++
T Consensus 242 ~~~~ 245 (336)
T 2b25_A 242 EKIS 245 (336)
T ss_dssp EEEE
T ss_pred ceEE
Confidence 4433
No 339
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.03 E-value=2.5e-10 Score=114.76 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=85.3
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhhC-CCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCCcee
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
....++.+|||+|||+|.++..++... ++.+|+|+|+|+.|++.|+++....+ .++++.++|+.++ +.+.+.||
T Consensus 199 ~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~----~~~~~~~D 274 (354)
T 3tma_A 199 ADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHL----PRFFPEVD 274 (354)
T ss_dssp TTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGG----GGTCCCCS
T ss_pred hCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhC----ccccCCCC
Confidence 344567899999999999999999986 77889999999999999999875433 3799999999976 44556799
Q ss_pred EEEE-----ccccccc------eeeec--ceEEecCCeEEEeeCH-HHHHHHHHhCCCcEEEE
Q 009871 149 IVTM-----ERLTGKD------QKISE--NFYVRGDGTRAFYFSN-DFLTSLFKENGFDVEEL 197 (523)
Q Consensus 149 ~V~~-----~~~~~~~------~~~~~--~~~~~~~g~~~~~~~~-~~l~~ll~~~Gf~~~~~ 197 (523)
+|++ .++.... ..+.. .-.++++|..++.... +.+..+++ .||...+.
T Consensus 275 ~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~~~~~~-~g~~~~~~ 336 (354)
T 3tma_A 275 RILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALLKRALP-PGFALRHA 336 (354)
T ss_dssp EEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHHHHHCC-TTEEEEEE
T ss_pred EEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHhh-cCcEEEEE
Confidence 9999 1221000 00000 1145678887776543 34555555 78876443
No 340
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.03 E-value=1.1e-09 Score=105.77 Aligned_cols=134 Identities=13% Similarity=0.070 Sum_probs=90.1
Q ss_pred CCCCeEEEECCCccHHHHHHHhc--CCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAG--SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~--~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
.++.+|||+|||+|+.+..+++. +..+|+++|+++.+++.+++|+..++.. ++.+...|..+ .........
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~----~v~~~~~D~~~---~~~~~~~~~ 154 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL----NTIIINADMRK---YKDYLLKNE 154 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC----SEEEEESCHHH---HHHHHHHTT
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC----cEEEEeCChHh---cchhhhhcc
Confidence 47889999999999999888874 3469999999999999999999998763 45555443321 100000024
Q ss_pred CCccEEEEccccCC------------------CCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCC-hhHHHHH
Q 009871 412 EGFEVILGTDVSYI------------------PEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD-EPSMLSA 472 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~------------------~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~-~~~~~~~ 472 (523)
++||+|++...... ......+++.+.++| +|||.++++...-... .+..++.
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~lv~stcs~~~~ene~~v~~ 225 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLL---------KKDGELVYSTCSMEVEENEEVIKY 225 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHE---------EEEEEEEEEESCCCTTSSHHHHHH
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhC---------CCCCEEEEEECCCChHHhHHHHHH
Confidence 68999997522211 135578899999999 6799998866543222 2334443
Q ss_pred -HHH-cCCEEEEE
Q 009871 473 -ATQ-CGFRLVDK 483 (523)
Q Consensus 473 -~~~-~gf~~~~~ 483 (523)
+++ .+|++..+
T Consensus 226 ~l~~~~~~~~~~~ 238 (274)
T 3ajd_A 226 ILQKRNDVELIII 238 (274)
T ss_dssp HHHHCSSEEEECC
T ss_pred HHHhCCCcEEecC
Confidence 434 46777654
No 341
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.03 E-value=7.7e-10 Score=110.88 Aligned_cols=129 Identities=12% Similarity=0.053 Sum_probs=95.1
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhcCCC-EEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAGSAD-LVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN 410 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~~~~-~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~ 410 (523)
...++.+|||||||+|.++..+++..+. +++++|+ +.++. +.++...+. ..++.+...|..+. +
T Consensus 181 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~---~~~v~~~~~d~~~~--------~- 245 (348)
T 3lst_A 181 DFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDV---AGRWKVVEGDFLRE--------V- 245 (348)
T ss_dssp CCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGG---TTSEEEEECCTTTC--------C-
T ss_pred CccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCC---CCCeEEEecCCCCC--------C-
Confidence 3446789999999999888888887544 8999999 55554 322222222 25688877766421 2
Q ss_pred CCCccEEEEccccCCCCCh--HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-----------------------CC
Q 009871 411 NEGFEVILGTDVSYIPEAI--LPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-----------------------VD 465 (523)
Q Consensus 411 ~~~fD~Ii~~d~~y~~~~~--~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-----------------------~~ 465 (523)
+ +||+|++..++++.... ..+++.+.++| +|||.+++...... .+
T Consensus 246 p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L---------kpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t 315 (348)
T 3lst_A 246 P-HADVHVLKRILHNWGDEDSVRILTNCRRVM---------PAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERT 315 (348)
T ss_dssp C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTC---------CTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCB
T ss_pred C-CCcEEEEehhccCCCHHHHHHHHHHHHHhc---------CCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCC
Confidence 3 89999999999887765 69999999999 77999998764321 13
Q ss_pred hhHHHHHHHHcCCEEEEEcC
Q 009871 466 EPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 466 ~~~~~~~~~~~gf~~~~~~~ 485 (523)
..++.+.++++||++.+++.
T Consensus 316 ~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 316 AAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp HHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHCCCceEEEEE
Confidence 45677888999999999987
No 342
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.02 E-value=2.9e-10 Score=104.08 Aligned_cols=76 Identities=17% Similarity=0.197 Sum_probs=63.7
Q ss_pred CCCCeEEEECCCccccHHHHHhhC-CCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
.++.+|||+|||+|..+..+++.. ++.+|+|+|+|+.|++.|+++....+ .+++++++|+.++. .+.+++||+|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~~fD~v 97 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD---KYIDCPVKAV 97 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG---GTCCSCEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh---hhccCCceEE
Confidence 467899999999999999999884 56799999999999999999865432 57999999987652 1456899999
Q ss_pred EE
Q 009871 151 TM 152 (523)
Q Consensus 151 ~~ 152 (523)
++
T Consensus 98 ~~ 99 (197)
T 3eey_A 98 MF 99 (197)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 343
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.02 E-value=3.8e-10 Score=113.98 Aligned_cols=73 Identities=16% Similarity=0.226 Sum_probs=63.5
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++.......++++++|+.+. +.++++||+|++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~----~~~~~~fD~Ii~ 304 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEA----LTEEARFDIIVT 304 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT----SCTTCCEEEEEE
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhc----cccCCCeEEEEE
Confidence 46789999999999999999988 56899999999999999998765555689999999876 444689999999
No 344
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.02 E-value=1.9e-10 Score=107.47 Aligned_cols=76 Identities=12% Similarity=0.105 Sum_probs=61.7
Q ss_pred CCCeEEEECCCccccHHHHHhhC-CCCEEEEEeCCHHHHHHHHhccccCC---CcEEEEEeeccCCccCCCCCCCceeEE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFTE---TRVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
++.+|||||||+|..+..+++.. ++++|+|+|+|+.|++.|+++....+ .+++++++|+.+. ++ .+++++||+|
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~-l~-~~~~~~fD~V 133 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV-MS-RLANDSYQLV 133 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH-GG-GSCTTCEEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH-HH-HhcCCCcCeE
Confidence 34599999999999999999985 47899999999999999999865332 4799999998753 11 2336899999
Q ss_pred EE
Q 009871 151 TM 152 (523)
Q Consensus 151 ~~ 152 (523)
++
T Consensus 134 ~~ 135 (221)
T 3dr5_A 134 FG 135 (221)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 345
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.01 E-value=8.4e-10 Score=111.40 Aligned_cols=115 Identities=17% Similarity=0.254 Sum_probs=82.6
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
..+..+|||||||+|..+..+++++|+.+++++|+ +.|++.|+++ .+++++.+|+.+ +++++ |+|++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~p~~--D~v~~ 267 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-----SGVEHLGGDMFD-----GVPKG--DAIFI 267 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-----CCCCC--SEEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-----CCCEEEecCCCC-----CCCCC--CEEEE
Confidence 34578999999999999999999999999999999 9999887654 579999999974 23443 99999
Q ss_pred -------------------ccccccceeeecceEEecCCe---------------------EEEeeCHHHHHHHHHhCCC
Q 009871 153 -------------------ERLTGKDQKISENFYVRGDGT---------------------RAFYFSNDFLTSLFKENGF 192 (523)
Q Consensus 153 -------------------~~~~~~~~~~~~~~~~~~~g~---------------------~~~~~~~~~l~~ll~~~Gf 192 (523)
.+.+++++++.-.....++.. .-..++.+++.++|+++||
T Consensus 268 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF 347 (368)
T 3reo_A 268 KWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGF 347 (368)
T ss_dssp ESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTC
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCC
Confidence 223344444321111111100 0012478999999999999
Q ss_pred cEEEEEeE
Q 009871 193 DVEELGLC 200 (523)
Q Consensus 193 ~~~~~~~~ 200 (523)
..+++...
T Consensus 348 ~~v~~~~~ 355 (368)
T 3reo_A 348 RGFKVASC 355 (368)
T ss_dssp CEEEEEEE
T ss_pred eeeEEEEe
Confidence 99887654
No 346
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.01 E-value=1.5e-09 Score=111.51 Aligned_cols=143 Identities=16% Similarity=0.126 Sum_probs=96.8
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhc--CCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEee
Q 009871 318 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAG--SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 395 (523)
Q Consensus 318 ~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~--~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~l 395 (523)
+++.+++..+. ..++.+|||+|||+|+.+..+|+. +..+|+++|+++.+++.+++|++.+++. ++.+...
T Consensus 92 ~ss~l~~~~L~----~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~----nv~v~~~ 163 (456)
T 3m4x_A 92 PSAMIVGTAAA----AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS----NAIVTNH 163 (456)
T ss_dssp TTTHHHHHHHC----CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS----SEEEECC
T ss_pred HHHHHHHHHcC----CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----ceEEEeC
Confidence 34566666663 346889999999999999988876 3468999999999999999999998874 3555433
Q ss_pred ecCCCCcchhhhhhcCCCccEEEEccccCC---------------CCC-------hHHHHHHHHHHhhccCCCCCCCCCc
Q 009871 396 EWGNRDHIEAIKEENNEGFEVILGTDVSYI---------------PEA-------ILPLFATAKELTASSNKSLREDQQP 453 (523)
Q Consensus 396 dw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~---------------~~~-------~~~l~~~l~~ll~~~~~~~~~~~~g 453 (523)
|. ..+....+++||+|++...... .+. ...++..+.++| +|||
T Consensus 164 Da------~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~L---------kpGG 228 (456)
T 3m4x_A 164 AP------AELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKML---------KNKG 228 (456)
T ss_dssp CH------HHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTE---------EEEE
T ss_pred CH------HHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhc---------CCCc
Confidence 22 1121223568999997432110 111 126777888888 6799
Q ss_pred EEEEEEeecC--CChhHHHHHHHHcCCEEEEE
Q 009871 454 AFILCHIFRQ--VDEPSMLSAATQCGFRLVDK 483 (523)
Q Consensus 454 ~~~l~~~~r~--~~~~~~~~~~~~~gf~~~~~ 483 (523)
.++.+...-. ..+..+...+++++|++..+
T Consensus 229 ~LvYsTCs~~~eEne~vv~~~l~~~~~~l~~~ 260 (456)
T 3m4x_A 229 QLIYSTCTFAPEENEEIISWLVENYPVTIEEI 260 (456)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHSSEEEECC
T ss_pred EEEEEEeecccccCHHHHHHHHHhCCCEEEec
Confidence 9887654432 23334555667888877665
No 347
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.01 E-value=3.1e-09 Score=101.01 Aligned_cols=131 Identities=8% Similarity=0.050 Sum_probs=86.7
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCC-EEEEEcCChHHHHHHHHHHHhcCCCC----CCCceEEEeeecCCCCcchhhhh
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSAD-LVVATDGDSIALDLLAQNVTANLKPP----FLAKLITKRLEWGNRDHIEAIKE 408 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~-~V~~~D~~~~~l~~~~~n~~~n~~~~----~~~~v~~~~ldw~~~~~~~~~~~ 408 (523)
.++.+|||||||+|.++..++..++. +|+++|+++.+++.+++|+..+.... ...++.+...|..+. +.. .
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~--l~~--~ 123 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKF--LPN--F 123 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSC--GGG--T
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHH--HHH--h
Confidence 36679999999999999988888754 89999999999999999998761110 113566666655432 111 1
Q ss_pred hcCCCccEEEEcc--ccCCCC------ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcCC
Q 009871 409 ENNEGFEVILGTD--VSYIPE------AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCGF 478 (523)
Q Consensus 409 ~~~~~fD~Ii~~d--~~y~~~------~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf 478 (523)
+..+.+|.|+... ..+... ....+++.+.++| +|||.+++...... -.+.+.+.+...|+
T Consensus 124 ~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~L---------kpgG~l~~~td~~~-~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 124 FEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVL---------KEGGVVYTITDVKD-LHEWMVKHLEEHPL 191 (246)
T ss_dssp SCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHE---------EEEEEEEEEESCHH-HHHHHHHHHHHSTT
T ss_pred ccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHc---------CCCCEEEEEeccHH-HHHHHHHHHHhCcC
Confidence 3456899998652 111100 1258999999999 67999988653321 01234455667775
No 348
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.01 E-value=2.5e-09 Score=100.75 Aligned_cols=132 Identities=11% Similarity=-0.014 Sum_probs=86.7
Q ss_pred CCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcC--CCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANL--KPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~--~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
++.+|||||||+|.++..+|... ...|+++|+++.|++.|++|+.... ......++.+...|..+. +.. .+..
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~--l~~--~~~~ 121 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKH--LPN--FFYK 121 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTC--HHH--HCCT
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHh--hhh--hCCC
Confidence 45689999999999888888875 4589999999999999998876410 001124577766655431 110 1446
Q ss_pred CCccEEEEccccCCC--------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhHHHHHHHHcC-CEE
Q 009871 412 EGFEVILGTDVSYIP--------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPSMLSAATQCG-FRL 480 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~--------~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~g-f~~ 480 (523)
++||.|+..-.--+. -....+++.+.++| +|||.+++...... -...+.+.+.+.| |..
T Consensus 122 ~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~L---------kpGG~l~~~td~~~-~~~~~~~~l~~~~~f~~ 189 (235)
T 3ckk_A 122 GQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVL---------RVGGLVYTITDVLE-LHDWMCTHFEEHPLFER 189 (235)
T ss_dssp TCEEEEEEESCC-----------CCCHHHHHHHHHHE---------EEEEEEEEEESCHH-HHHHHHHHHHTSTTEEE
T ss_pred cCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHC---------CCCCEEEEEeCCHH-HHHHHHHHHHHCCCccc
Confidence 799999865211110 01257999999999 67999998764421 1123456666776 443
No 349
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.00 E-value=4.9e-10 Score=104.99 Aligned_cols=129 Identities=12% Similarity=0.123 Sum_probs=83.2
Q ss_pred CCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCC-hHHHHHH---HHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhh
Q 009871 335 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGD-SIALDLL---AQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE 409 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~-~~~l~~~---~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~ 409 (523)
++.+|||||||+|.++..+++. ...+|+++|+| +.|++.| ++++..++. .++.+...+..+. .. .+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~----~~v~~~~~d~~~l---~~--~~ 94 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL----SNVVFVIAAAESL---PF--EL 94 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC----SSEEEECCBTTBC---CG--GG
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC----CCeEEEEcCHHHh---hh--hc
Confidence 6679999999999888888764 34589999999 6777766 777666554 3466655554332 10 01
Q ss_pred cCCCccEEEEccccCCC--------CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC--------------CChh
Q 009871 410 NNEGFEVILGTDVSYIP--------EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ--------------VDEP 467 (523)
Q Consensus 410 ~~~~fD~Ii~~d~~y~~--------~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~--------------~~~~ 467 (523)
...+|.|.++ +.. .....+++.+.++| +|||.++++..... ....
T Consensus 95 -~d~v~~i~~~---~~~~~~~~~~~~~~~~~l~~~~r~L---------kpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 161 (225)
T 3p2e_A 95 -KNIADSISIL---FPWGTLLEYVIKPNRDILSNVADLA---------KKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKA 161 (225)
T ss_dssp -TTCEEEEEEE---SCCHHHHHHHHTTCHHHHHHHHTTE---------EEEEEEEEEECCCC--------------CCHH
T ss_pred -cCeEEEEEEe---CCCcHHhhhhhcchHHHHHHHHHhc---------CCCcEEEEEEeccccchhchhhhcCCCCCChh
Confidence 1344444443 321 12356889999999 67999988332110 1111
Q ss_pred -----HHHHHHHHcCCEEEEEcC
Q 009871 468 -----SMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 468 -----~~~~~~~~~gf~~~~~~~ 485 (523)
++.+.+++.||++..+..
T Consensus 162 ~~~~~el~~~l~~aGf~v~~~~~ 184 (225)
T 3p2e_A 162 YFLSEQYKAELSNSGFRIDDVKE 184 (225)
T ss_dssp HHHSHHHHHHHHHHTCEEEEEEE
T ss_pred hcchHHHHHHHHHcCCCeeeeee
Confidence 266778899999988754
No 350
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.00 E-value=1.5e-09 Score=105.58 Aligned_cols=133 Identities=14% Similarity=0.111 Sum_probs=86.5
Q ss_pred CCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHHhcCC-CCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLK-PPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~~n~~-~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
+.++|||||||+|.++..+++. +..+|+++|+|+.+++.+++|+...+. .....++.+...|..+. + ....+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~--l----~~~~~ 156 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF--V----NQTSQ 156 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---------CCCC
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHH--H----hhcCC
Confidence 4679999999999988888887 456899999999999999999875421 11124666666554432 1 11246
Q ss_pred CccEEEEc--cccCCCCCh--HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCC---hhHHHHHHHHcCCEEEEE
Q 009871 413 GFEVILGT--DVSYIPEAI--LPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD---EPSMLSAATQCGFRLVDK 483 (523)
Q Consensus 413 ~fD~Ii~~--d~~y~~~~~--~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~---~~~~~~~~~~~gf~~~~~ 483 (523)
+||+|++. |.......+ ..+++.+.++| +|||.+++........ ...+.+.+++. |.....
T Consensus 157 ~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~L---------kpgG~lv~~~~s~~~~~~~~~~~~~~l~~~-F~~v~~ 224 (294)
T 3adn_A 157 TFDVIISDCTDPIGPGESLFTSAFYEGCKRCL---------NPGGIFVAQNGVCFLQQEEAIDSHRKLSHY-FSDVGF 224 (294)
T ss_dssp CEEEEEECC----------CCHHHHHHHHHTE---------EEEEEEEEEEEECSSCCHHHHHHHHHHHHH-CSEEEE
T ss_pred CccEEEECCCCccCcchhccHHHHHHHHHHhc---------CCCCEEEEecCCcccchHHHHHHHHHHHHH-CCCeEE
Confidence 89999983 222111222 77999999999 6799988865432222 23455666665 444443
No 351
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.00 E-value=1.1e-09 Score=103.33 Aligned_cols=105 Identities=12% Similarity=0.052 Sum_probs=78.3
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
...++.+|||+|||+|.++..++..++.+|+++|+++.+++.+++|+..++.. .+.+...|... ... ..
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~v~~~~~d~~~--~~~-----~~ 156 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK----NVHVILGDGSK--GFP-----PK 156 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC----SEEEEESCGGG--CCG-----GG
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC----CcEEEECCccc--CCC-----CC
Confidence 34578899999999998888888875478999999999999999999987663 36666555411 111 12
Q ss_pred CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 009871 412 EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 462 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r 462 (523)
.+||+|+++.++.+.. +.+.++| +|||.+++.....
T Consensus 157 ~~fD~Ii~~~~~~~~~------~~~~~~L---------~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 157 APYDVIIVTAGAPKIP------EPLIEQL---------KIGGKLIIPVGSY 192 (235)
T ss_dssp CCEEEEEECSBBSSCC------HHHHHTE---------EEEEEEEEEECSS
T ss_pred CCccEEEECCcHHHHH------HHHHHhc---------CCCcEEEEEEecC
Confidence 3599999987765432 4677888 6799999887653
No 352
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.00 E-value=3.2e-10 Score=113.57 Aligned_cols=73 Identities=18% Similarity=0.161 Sum_probs=62.1
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
.++.+|||||||+|.++..+++. +..+|+|+|+|+ |++.|+++.... ..+++++++|+.++ ++++++||+|+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~fD~Ii 138 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEV----ELPVEKVDIII 138 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC----CCSSSCEEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHc----cCCCCceEEEE
Confidence 46789999999999999999988 345899999995 999999876543 24599999999987 56778999999
Q ss_pred E
Q 009871 152 M 152 (523)
Q Consensus 152 ~ 152 (523)
+
T Consensus 139 s 139 (349)
T 3q7e_A 139 S 139 (349)
T ss_dssp E
T ss_pred E
Confidence 8
No 353
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.00 E-value=4.1e-10 Score=111.08 Aligned_cols=124 Identities=10% Similarity=0.064 Sum_probs=87.1
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCCCce
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
++...++.+|||+|||+|..+..+++..+ +.+|+|+|+|+.|++.++++.... ..++.++++|+..+ +..+++|
T Consensus 113 ~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~----~~~~~~f 188 (315)
T 1ixk_A 113 ALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHI----GELNVEF 188 (315)
T ss_dssp HHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGG----GGGCCCE
T ss_pred HhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhc----ccccccC
Confidence 34556788999999999999999998854 589999999999999999986433 24799999999865 2235689
Q ss_pred eEEEE-cc------ccc-cc-----------------eee-ec-ceEEecCCeEEEee-------CHHHHHHHHHhCCCc
Q 009871 148 DIVTM-ER------LTG-KD-----------------QKI-SE-NFYVRGDGTRAFYF-------SNDFLTSLFKENGFD 193 (523)
Q Consensus 148 D~V~~-~~------~~~-~~-----------------~~~-~~-~~~~~~~g~~~~~~-------~~~~l~~ll~~~Gf~ 193 (523)
|+|++ .. +.. +. ..+ .. .-+++++|.+++.. ..+.+..++++.||+
T Consensus 189 D~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~ 268 (315)
T 1ixk_A 189 DKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVE 268 (315)
T ss_dssp EEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred CEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCE
Confidence 99998 11 100 00 000 00 12578889887731 233467778888887
Q ss_pred EEEE
Q 009871 194 VEEL 197 (523)
Q Consensus 194 ~~~~ 197 (523)
.+.+
T Consensus 269 ~~~~ 272 (315)
T 1ixk_A 269 LLPL 272 (315)
T ss_dssp EECC
T ss_pred EecC
Confidence 6544
No 354
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.99 E-value=7.7e-10 Score=103.63 Aligned_cols=76 Identities=17% Similarity=0.059 Sum_probs=63.1
Q ss_pred CCCCCeEEEECCCccccHHHHHhh-CCCCEEEEEeCCHHHHHHHHhccccC------CCcEEEEEeeccCCccCCCCCCC
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFT------ETRVSTFVCDLISDDLSRQISPS 145 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~gvD~S~~~l~~a~~~~~~~------~~~v~~~~~d~~~~~~~~~~~~~ 145 (523)
..++.+|||||||+|..+..+++. .+..+|+|+|+|+.|++.|+++.... ..++++.++|+... +..++
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~~~ 150 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG----YAEEA 150 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC----CGGGC
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC----cccCC
Confidence 357889999999999999999988 45578999999999999999876432 24799999999754 33467
Q ss_pred ceeEEEE
Q 009871 146 SIDIVTM 152 (523)
Q Consensus 146 ~fD~V~~ 152 (523)
+||+|++
T Consensus 151 ~fD~i~~ 157 (226)
T 1i1n_A 151 PYDAIHV 157 (226)
T ss_dssp CEEEEEE
T ss_pred CcCEEEE
Confidence 8999988
No 355
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.99 E-value=4.4e-10 Score=106.33 Aligned_cols=110 Identities=11% Similarity=0.041 Sum_probs=81.8
Q ss_pred CCCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhh----
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIK---- 407 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~---- 407 (523)
.++.+|||||||+|..+..++... ..+|+++|+++.+++.+++|+..++.. .++.+...|..+. ...+.
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~---~~v~~~~~d~~~~--~~~~~~~~~ 133 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE---NKIFLKLGSALET--LQVLIDSKS 133 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG---GGEEEEESCHHHH--HHHHHHCSS
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CCEEEEECCHHHH--HHHHHhhcc
Confidence 367899999999998888888774 469999999999999999999987764 3566665443211 11110
Q ss_pred ------hhcC--CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 009871 408 ------EENN--EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 408 ------~~~~--~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
.++. ++||+|++. ........+++.+.++| +|||.+++...
T Consensus 134 ~~~~~~~f~~~~~~fD~I~~~---~~~~~~~~~l~~~~~~L---------~pgG~lv~~~~ 182 (239)
T 2hnk_A 134 APSWASDFAFGPSSIDLFFLD---ADKENYPNYYPLILKLL---------KPGGLLIADNV 182 (239)
T ss_dssp CCGGGTTTCCSTTCEEEEEEC---SCGGGHHHHHHHHHHHE---------EEEEEEEEECS
T ss_pred cccccccccCCCCCcCEEEEe---CCHHHHHHHHHHHHHHc---------CCCeEEEEEcc
Confidence 0111 689999986 44566778999999999 67999998653
No 356
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.99 E-value=1.2e-10 Score=110.33 Aligned_cols=108 Identities=17% Similarity=0.098 Sum_probs=82.2
Q ss_pred CCCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhh--
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE-- 409 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~-- 409 (523)
.++++|||||||+|..+..++... ..+|+++|+++.+++.+++|+..+++. .++.+...|..+ .+..+
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~---~~i~~~~gda~~-----~l~~~~~ 130 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE---HKIKLRLGPALD-----TLHSLLN 130 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT---TTEEEEESCHHH-----HHHHHHH
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEEcCHHH-----HHHHHhh
Confidence 356799999999998888888753 469999999999999999999998775 467776544321 11111
Q ss_pred --cCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 410 --NNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 410 --~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
..++||+|+... .......+++.+.++| +|||.+++....
T Consensus 131 ~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~L---------kpGG~lv~d~~~ 172 (242)
T 3r3h_A 131 EGGEHQFDFIFIDA---DKTNYLNYYELALKLV---------TPKGLIAIDNIF 172 (242)
T ss_dssp HHCSSCEEEEEEES---CGGGHHHHHHHHHHHE---------EEEEEEEEECSS
T ss_pred ccCCCCEeEEEEcC---ChHHhHHHHHHHHHhc---------CCCeEEEEECCc
Confidence 146899999852 3566788899999999 679999886554
No 357
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.99 E-value=8.2e-10 Score=102.22 Aligned_cols=104 Identities=11% Similarity=0.000 Sum_probs=79.4
Q ss_pred CCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
++++|||+|||+|..+..++... ..+|+++|+++.+++.+++|+..++.. .++.+...|..+. + +..++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~-----~-~~~~~ 126 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI---DRVELQVGDPLGI-----A-AGQRD 126 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG---GGEEEEESCHHHH-----H-TTCCS
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC---ceEEEEEecHHHH-----h-ccCCC
Confidence 56799999999998888887763 469999999999999999999887663 4566665443211 1 11235
Q ss_pred CccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 009871 413 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
||+|++. ........+++.+.++| +|||.+++...
T Consensus 127 -fD~v~~~---~~~~~~~~~l~~~~~~L---------kpgG~lv~~~~ 161 (210)
T 3c3p_A 127 -IDILFMD---CDVFNGADVLERMNRCL---------AKNALLIAVNA 161 (210)
T ss_dssp -EEEEEEE---TTTSCHHHHHHHHGGGE---------EEEEEEEEESS
T ss_pred -CCEEEEc---CChhhhHHHHHHHHHhc---------CCCeEEEEECc
Confidence 9999986 34567889999999999 67999887543
No 358
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.99 E-value=1.3e-09 Score=109.91 Aligned_cols=115 Identities=17% Similarity=0.178 Sum_probs=82.8
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
..+..+|||||||+|..+..+++++|+.+++++|+ +.|++.|++. .+++++.+|+.+ +++.+ |+|++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~D~~~-----~~p~~--D~v~~ 265 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-----PGVTHVGGDMFK-----EVPSG--DTILM 265 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-----CCCCC--SEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-----CCeEEEeCCcCC-----CCCCC--CEEEe
Confidence 35678999999999999999999999999999999 9998877653 579999999975 23443 99999
Q ss_pred -------------------ccccccceeeecceEEecCC-e---------------E-----EEeeCHHHHHHHHHhCCC
Q 009871 153 -------------------ERLTGKDQKISENFYVRGDG-T---------------R-----AFYFSNDFLTSLFKENGF 192 (523)
Q Consensus 153 -------------------~~~~~~~~~~~~~~~~~~~g-~---------------~-----~~~~~~~~l~~ll~~~Gf 192 (523)
.+.+++++++.-.....++. . . -..++.+++.++|+++||
T Consensus 266 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF 345 (364)
T 3p9c_A 266 KWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGF 345 (364)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTC
T ss_pred hHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCC
Confidence 22234444432111111110 0 0 012478999999999999
Q ss_pred cEEEEEeE
Q 009871 193 DVEELGLC 200 (523)
Q Consensus 193 ~~~~~~~~ 200 (523)
+.+++...
T Consensus 346 ~~v~~~~~ 353 (364)
T 3p9c_A 346 TGVKSTYI 353 (364)
T ss_dssp CEEEEEEE
T ss_pred ceEEEEEc
Confidence 99887654
No 359
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.98 E-value=1.8e-09 Score=101.19 Aligned_cols=111 Identities=12% Similarity=0.108 Sum_probs=80.0
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcCC------CEEEEEcCChHHHHHHHHHHHhcCCC-CCCCceEEEeeecCCCCcchh
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGSA------DLVVATDGDSIALDLLAQNVTANLKP-PFLAKLITKRLEWGNRDHIEA 405 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~~------~~V~~~D~~~~~l~~~~~n~~~n~~~-~~~~~v~~~~ldw~~~~~~~~ 405 (523)
..++.+|||+|||+|.++..++.... .+|+++|+++.+++.+++|+..++.. ....++.+...|..+... ..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~ 156 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE-EE 156 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH-HH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccc-cc
Confidence 34788999999999988888887653 48999999999999999999887620 001356666665543210 00
Q ss_pred hhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 406 IKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 406 ~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
.....+||+|++...+.+ +++.+.++| +|||.+++....
T Consensus 157 --~~~~~~fD~I~~~~~~~~------~~~~~~~~L---------kpgG~lv~~~~~ 195 (227)
T 2pbf_A 157 --KKELGLFDAIHVGASASE------LPEILVDLL---------AENGKLIIPIEE 195 (227)
T ss_dssp --HHHHCCEEEEEECSBBSS------CCHHHHHHE---------EEEEEEEEEEEE
T ss_pred --CccCCCcCEEEECCchHH------HHHHHHHhc---------CCCcEEEEEEcc
Confidence 012358999999876653 357888899 679999988765
No 360
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.98 E-value=2.9e-09 Score=106.83 Aligned_cols=121 Identities=17% Similarity=0.154 Sum_probs=85.2
Q ss_pred cCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc-CCCcEEEEEeeccCCccCCCCCCCceeEE
Q 009871 72 SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-TETRVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 72 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
+.....+|||||||+|..+..+++++|+.+++..|. |.+++.|+++... ...+++++.+|+... +. ..+|+|
T Consensus 176 ~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~----~~--~~~D~~ 248 (353)
T 4a6d_A 176 DLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKD----PL--PEADLY 248 (353)
T ss_dssp CGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTS----CC--CCCSEE
T ss_pred CcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccC----CC--CCceEE
Confidence 335667999999999999999999999999999997 8899999987643 347899999999754 33 347999
Q ss_pred EE-------------------ccccccceeeecce-EEecCCeEE----------------EeeCHHHHHHHHHhCCCcE
Q 009871 151 TM-------------------ERLTGKDQKISENF-YVRGDGTRA----------------FYFSNDFLTSLFKENGFDV 194 (523)
Q Consensus 151 ~~-------------------~~~~~~~~~~~~~~-~~~~~g~~~----------------~~~~~~~l~~ll~~~Gf~~ 194 (523)
++ .+.+++++++.-.. ++.+++... .-+|.+++.++|+++||+.
T Consensus 249 ~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~ 328 (353)
T 4a6d_A 249 ILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRD 328 (353)
T ss_dssp EEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEE
T ss_pred EeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCce
Confidence 99 11223333322110 111111100 0147899999999999998
Q ss_pred EEEEe
Q 009871 195 EELGL 199 (523)
Q Consensus 195 ~~~~~ 199 (523)
+++..
T Consensus 329 v~v~~ 333 (353)
T 4a6d_A 329 FQFKK 333 (353)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 87753
No 361
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.98 E-value=5.3e-10 Score=100.42 Aligned_cols=75 Identities=12% Similarity=0.149 Sum_probs=61.0
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
.++.+|||+|||+|..+..+++. +..+|+|+|+|+.|++.|+++....+ .+++++++|+.+. + +..+++||+|+
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~--~~~~~~fD~i~ 105 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA-I--DCLTGRFDLVF 105 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH-H--HHBCSCEEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh-H--HhhcCCCCEEE
Confidence 56789999999999999999887 34689999999999999999875443 4699999998752 1 22346799998
Q ss_pred E
Q 009871 152 M 152 (523)
Q Consensus 152 ~ 152 (523)
+
T Consensus 106 ~ 106 (177)
T 2esr_A 106 L 106 (177)
T ss_dssp E
T ss_pred E
Confidence 8
No 362
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.98 E-value=7.6e-10 Score=109.40 Aligned_cols=84 Identities=14% Similarity=0.116 Sum_probs=67.4
Q ss_pred HHHhhhhcCCCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCC
Q 009871 65 KEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQI 142 (523)
Q Consensus 65 ~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~ 142 (523)
..+.+.+...++.+|||||||+|.++..+++.++ +.+|+|+|+|+.|++.|+++.... ..++++.++|+.+. +.
T Consensus 65 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~----~~ 140 (317)
T 1dl5_A 65 ALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG----VP 140 (317)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----CG
T ss_pred HHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc----cc
Confidence 3334445556788999999999999999999865 478999999999999999976433 24699999999864 23
Q ss_pred CCCceeEEEE
Q 009871 143 SPSSIDIVTM 152 (523)
Q Consensus 143 ~~~~fD~V~~ 152 (523)
++++||+|++
T Consensus 141 ~~~~fD~Iv~ 150 (317)
T 1dl5_A 141 EFSPYDVIFV 150 (317)
T ss_dssp GGCCEEEEEE
T ss_pred cCCCeEEEEE
Confidence 4578999998
No 363
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.98 E-value=7e-10 Score=100.88 Aligned_cols=76 Identities=12% Similarity=0.074 Sum_probs=61.5
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++....+ .+++++++|+.+.. ..+++++||+|++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~~fD~i~~ 119 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVV--AAGTTSPVDLVLA 119 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHH--HHCCSSCCSEEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHH--hhccCCCccEEEE
Confidence 467899999999999999887763 4579999999999999999865433 57999999997541 1134679999998
No 364
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.98 E-value=1.7e-09 Score=101.49 Aligned_cols=108 Identities=16% Similarity=0.083 Sum_probs=81.4
Q ss_pred CCCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
.++++|||+|||+|..+..++... ..+|+++|+++.+++.+++|+..++.. .++.+...|..+ .+..+..
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~---~~i~~~~~d~~~-----~~~~~~~ 139 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE---HKIDLRLKPALE-----TLDELLA 139 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT---TTEEEEESCHHH-----HHHHHHH
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC---CeEEEEEcCHHH-----HHHHHHh
Confidence 367899999999998888888763 469999999999999999999988764 456666544321 1111211
Q ss_pred ----CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 412 ----EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 412 ----~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
++||+|++.. .......+++.+.++| +|||.+++....
T Consensus 140 ~~~~~~~D~v~~d~---~~~~~~~~l~~~~~~L---------~pgG~lv~~~~~ 181 (229)
T 2avd_A 140 AGEAGTFDVAVVDA---DKENCSAYYERCLQLL---------RPGGILAVLRVL 181 (229)
T ss_dssp TTCTTCEEEEEECS---CSTTHHHHHHHHHHHE---------EEEEEEEEECCS
T ss_pred cCCCCCccEEEECC---CHHHHHHHHHHHHHHc---------CCCeEEEEECCC
Confidence 6899999853 2556788999999999 679999886544
No 365
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.97 E-value=8.3e-10 Score=102.50 Aligned_cols=81 Identities=16% Similarity=0.052 Sum_probs=64.3
Q ss_pred hhhhcCCCCCeEEEECCCccccHHHHHhhC-CCCEEEEEeCCHHHHHHHHhcccc-CCCcEEEEEeeccCCccCCCCCCC
Q 009871 68 GRYFSGAGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDF-TETRVSTFVCDLISDDLSRQISPS 145 (523)
Q Consensus 68 ~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~gvD~S~~~l~~a~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~ 145 (523)
.+.+...++.+|||||||+|..+..+++.. +..+|+|+|+|+.+++.|+++... ...++++.++|+... ...++
T Consensus 70 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~~~~~ 145 (215)
T 2yxe_A 70 CELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLG----YEPLA 145 (215)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGC----CGGGC
T ss_pred HHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC----CCCCC
Confidence 334455678899999999999999999885 557899999999999999987643 224699999998542 12257
Q ss_pred ceeEEEE
Q 009871 146 SIDIVTM 152 (523)
Q Consensus 146 ~fD~V~~ 152 (523)
+||+|++
T Consensus 146 ~fD~v~~ 152 (215)
T 2yxe_A 146 PYDRIYT 152 (215)
T ss_dssp CEEEEEE
T ss_pred CeeEEEE
Confidence 8999998
No 366
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.97 E-value=1e-09 Score=106.52 Aligned_cols=90 Identities=16% Similarity=0.158 Sum_probs=70.5
Q ss_pred ccccchhhhHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeecc
Q 009871 55 RFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLI 134 (523)
Q Consensus 55 ~f~~~~~~l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~ 134 (523)
+|..+...+ ..+-+.+...++.+|||||||+|.++..|++. +.+|+|||+++.|++.++++.. ...+++++++|+.
T Consensus 31 nfL~d~~i~-~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~-~~~~v~vi~gD~l 106 (295)
T 3gru_A 31 CFLIDKNFV-NKAVESANLTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKE-LYNNIEIIWGDAL 106 (295)
T ss_dssp CEECCHHHH-HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHH-HCSSEEEEESCTT
T ss_pred cccCCHHHH-HHHHHhcCCCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhc-cCCCeEEEECchh
Confidence 354444443 33334455567889999999999999999998 5679999999999999998764 3467999999999
Q ss_pred CCccCCCCCCCceeEEEE
Q 009871 135 SDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 135 ~~~~~~~~~~~~fD~V~~ 152 (523)
+. ++++.+||+|++
T Consensus 107 ~~----~~~~~~fD~Iv~ 120 (295)
T 3gru_A 107 KV----DLNKLDFNKVVA 120 (295)
T ss_dssp TS----CGGGSCCSEEEE
T ss_pred hC----CcccCCccEEEE
Confidence 87 455567999977
No 367
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.97 E-value=7.2e-10 Score=106.89 Aligned_cols=117 Identities=13% Similarity=0.195 Sum_probs=74.0
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEE-EEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVST-FVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~-~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
.++.+|||||||||.++..|++.. ..+|+|||+|+.|++.+.++. .++.. ...|+..+... .++..+||+|++
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~g-a~~V~aVDvs~~mL~~a~r~~----~rv~~~~~~ni~~l~~~-~l~~~~fD~v~~ 157 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNG-AKLVYAVDVGTNQLVWKLRQD----DRVRSMEQYNFRYAEPV-DFTEGLPSFASI 157 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSSSCSCHHHHTC----TTEEEECSCCGGGCCGG-GCTTCCCSEEEE
T ss_pred ccccEEEecCCCccHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhC----cccceecccCceecchh-hCCCCCCCEEEE
Confidence 467799999999999999998873 458999999999999855432 23322 23445433211 234456999998
Q ss_pred --------------ccccccceeeecceEEec-----------CCeE----EEeeCHHHHHHHHHhCCCcEEEEE
Q 009871 153 --------------ERLTGKDQKISENFYVRG-----------DGTR----AFYFSNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 153 --------------~~~~~~~~~~~~~~~~~~-----------~g~~----~~~~~~~~l~~ll~~~Gf~~~~~~ 198 (523)
.+++++++.+.- ..+| .|.. .+....+++..++.++||.+..+.
T Consensus 158 d~sf~sl~~vL~e~~rvLkpGG~lv~--lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~ 230 (291)
T 3hp7_A 158 DVSFISLNLILPALAKILVDGGQVVA--LVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLD 230 (291)
T ss_dssp CCSSSCGGGTHHHHHHHSCTTCEEEE--EECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred EeeHhhHHHHHHHHHHHcCcCCEEEE--EECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 333444444321 1111 1110 012356788999999999976654
No 368
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.97 E-value=2.7e-09 Score=109.75 Aligned_cols=143 Identities=24% Similarity=0.205 Sum_probs=94.0
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEee
Q 009871 318 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 395 (523)
Q Consensus 318 ~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~l 395 (523)
+++.+++.++. ..++.+|||+|||+|+.+..+|+.. ..+|+++|+++.+++.+++|++.+++. +.+...
T Consensus 88 ~ss~l~a~~L~----~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-----v~~~~~ 158 (464)
T 3m6w_A 88 PSAQAVGVLLD----PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-----LAVTQA 158 (464)
T ss_dssp TTTHHHHHHHC----CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-----CEEECS
T ss_pred HHHHHHHHhcC----cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-----EEEEEC
Confidence 34555666653 3478899999999999999988763 358999999999999999999998763 444433
Q ss_pred ecCCCCcchhhhhhcCCCccEEEEccc------cCC-CC--------Ch-------HHHHHHHHHHhhccCCCCCCCCCc
Q 009871 396 EWGNRDHIEAIKEENNEGFEVILGTDV------SYI-PE--------AI-------LPLFATAKELTASSNKSLREDQQP 453 (523)
Q Consensus 396 dw~~~~~~~~~~~~~~~~fD~Ii~~d~------~y~-~~--------~~-------~~l~~~l~~ll~~~~~~~~~~~~g 453 (523)
|. ..+.....++||+|++... +.. ++ .+ ..+++.+.++| +|||
T Consensus 159 Da------~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~L---------kpGG 223 (464)
T 3m6w_A 159 PP------RALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLL---------GPGG 223 (464)
T ss_dssp CH------HHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTE---------EEEE
T ss_pred CH------HHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhc---------CCCc
Confidence 22 1122223568999996321 111 11 11 56777777888 6799
Q ss_pred EEEEEEeecC--CChhHHHHHHHHc-CCEEEEEc
Q 009871 454 AFILCHIFRQ--VDEPSMLSAATQC-GFRLVDKW 484 (523)
Q Consensus 454 ~~~l~~~~r~--~~~~~~~~~~~~~-gf~~~~~~ 484 (523)
.++.+...-. ..+..+...++++ +|++..+.
T Consensus 224 ~LvysTCs~~~eEne~vv~~~l~~~~~~~l~~~~ 257 (464)
T 3m6w_A 224 VLVYSTCTFAPEENEGVVAHFLKAHPEFRLEDAR 257 (464)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHCTTEEEECCC
T ss_pred EEEEEeccCchhcCHHHHHHHHHHCCCcEEEecc
Confidence 9987654422 2233344445566 68877653
No 369
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.97 E-value=4.9e-09 Score=101.23 Aligned_cols=131 Identities=12% Similarity=0.097 Sum_probs=88.6
Q ss_pred CCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHHh--cCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 335 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTA--NLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~~--n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
.+++|||||||+|.++..+++. +..+|+++|+|+.+++.+++|+.. ++. ...++.+...|.. .-+ ....
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~--~~~rv~v~~~D~~-----~~l-~~~~ 146 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL--DDPRVDVQVDDGF-----MHI-AKSE 146 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT--TSTTEEEEESCSH-----HHH-HTCC
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc--CCCceEEEECcHH-----HHH-hhCC
Confidence 5689999999999888888887 567999999999999999998754 222 2246766654321 111 1124
Q ss_pred CCccEEEEccccCCCC-----ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCCh---hHHHHHHHHcCCEEEEE
Q 009871 412 EGFEVILGTDVSYIPE-----AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDE---PSMLSAATQCGFRLVDK 483 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~-----~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~---~~~~~~~~~~gf~~~~~ 483 (523)
++||+|++ |..+... ....+++.+.++| +|+|.+++......... ..+.+.+++. |.....
T Consensus 147 ~~fD~Ii~-d~~~~~~~~~~l~~~~~~~~~~~~L---------~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 215 (275)
T 1iy9_A 147 NQYDVIMV-DSTEPVGPAVNLFTKGFYAGIAKAL---------KEDGIFVAQTDNPWFTPELITNVQRDVKEI-FPITKL 215 (275)
T ss_dssp SCEEEEEE-SCSSCCSCCCCCSTTHHHHHHHHHE---------EEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEEEE
T ss_pred CCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhc---------CCCcEEEEEcCCccccHHHHHHHHHHHHHh-CCCeEE
Confidence 68999998 5544211 1367999999999 67999988654322222 3455666666 554444
Q ss_pred c
Q 009871 484 W 484 (523)
Q Consensus 484 ~ 484 (523)
+
T Consensus 216 ~ 216 (275)
T 1iy9_A 216 Y 216 (275)
T ss_dssp E
T ss_pred E
Confidence 4
No 370
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.96 E-value=2e-09 Score=100.72 Aligned_cols=107 Identities=14% Similarity=0.035 Sum_probs=78.5
Q ss_pred CCCCCeEEEECCCccHHHHHHHhc-CC-CEEEEEcCChHHHHHHHHHHHhcCCCC-CCCceEEEeeecCCCCcchhhhhh
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAG-SA-DLVVATDGDSIALDLLAQNVTANLKPP-FLAKLITKRLEWGNRDHIEAIKEE 409 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~-~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~-~~~~v~~~~ldw~~~~~~~~~~~~ 409 (523)
..++.+|||+|||+|.++..++.. +. .+|+++|+++.+++.+++|+..++... ...++.+...|..... .
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-------~ 147 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY-------A 147 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC-------G
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc-------c
Confidence 357889999999999888888876 33 489999999999999999998765300 0135666665554221 1
Q ss_pred cCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 410 NNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 410 ~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
...+||+|++..++. .+++.+.++| +|||.++++...
T Consensus 148 ~~~~fD~i~~~~~~~------~~~~~~~~~L---------kpgG~lv~~~~~ 184 (226)
T 1i1n_A 148 EEAPYDAIHVGAAAP------VVPQALIDQL---------KPGGRLILPVGP 184 (226)
T ss_dssp GGCCEEEEEECSBBS------SCCHHHHHTE---------EEEEEEEEEESC
T ss_pred cCCCcCEEEECCchH------HHHHHHHHhc---------CCCcEEEEEEec
Confidence 245899999886653 2456788899 679999988755
No 371
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.96 E-value=7.2e-10 Score=110.68 Aligned_cols=79 Identities=11% Similarity=0.186 Sum_probs=63.1
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccc-------c---CCCcEEEEEeeccCCccC
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKD-------F---TETRVSTFVCDLISDDLS 139 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~-------~---~~~~v~~~~~d~~~~~~~ 139 (523)
.+...++.+|||||||+|.++..++...+..+|+|||+|+.|++.|+++.. . ...+++++++|+.++
T Consensus 168 ~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~l--- 244 (438)
T 3uwp_A 168 EIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSE--- 244 (438)
T ss_dssp HHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSH---
T ss_pred hcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCC---
Confidence 345578899999999999999999987655569999999999999987431 1 136899999999876
Q ss_pred CCCCC--CceeEEEE
Q 009871 140 RQISP--SSIDIVTM 152 (523)
Q Consensus 140 ~~~~~--~~fD~V~~ 152 (523)
++++ ..||+|++
T Consensus 245 -p~~d~~~~aDVVf~ 258 (438)
T 3uwp_A 245 -EWRERIANTSVIFV 258 (438)
T ss_dssp -HHHHHHHTCSEEEE
T ss_pred -ccccccCCccEEEE
Confidence 3333 47999998
No 372
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.96 E-value=2.2e-09 Score=102.16 Aligned_cols=91 Identities=14% Similarity=0.212 Sum_probs=68.7
Q ss_pred cccchhhhHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccC
Q 009871 56 FFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLIS 135 (523)
Q Consensus 56 f~~~~~~l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~ 135 (523)
|..+...+ ..+-+.+...++.+|||||||+|.++..|+++. .+|+|+|+++.|++.++++... ..+++++++|+.+
T Consensus 11 FL~d~~i~-~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~-~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 11 FLHDSFVL-QKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQ-QKNITIYQNDALQ 86 (255)
T ss_dssp EECCHHHH-HHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTT-CTTEEEEESCTTT
T ss_pred cccCHHHH-HHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhh-CCCcEEEEcchHh
Confidence 44444433 333344555678899999999999999999884 6799999999999999987643 4689999999998
Q ss_pred CccCCCCCCCceeEE
Q 009871 136 DDLSRQISPSSIDIV 150 (523)
Q Consensus 136 ~~~~~~~~~~~fD~V 150 (523)
.+++..+.++.||+|
T Consensus 87 ~~~~~~~~~~~~~vv 101 (255)
T 3tqs_A 87 FDFSSVKTDKPLRVV 101 (255)
T ss_dssp CCGGGSCCSSCEEEE
T ss_pred CCHHHhccCCCeEEE
Confidence 865432334578855
No 373
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.96 E-value=1.7e-09 Score=102.17 Aligned_cols=109 Identities=11% Similarity=0.007 Sum_probs=80.9
Q ss_pred CCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhh--c
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE--N 410 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~--~ 410 (523)
++++|||||||+|..+..++... ..+|+++|+++.+++.+++|+..++.. .++.+...|..+. +..+... .
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~---~~i~~~~gda~~~--l~~l~~~~~~ 144 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE---HKINFIESDAMLA--LDNLLQGQES 144 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG---GGEEEEESCHHHH--HHHHHHSTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEEcCHHHH--HHHHHhccCC
Confidence 56799999999998888887763 469999999999999999999987764 4677765544221 1111000 1
Q ss_pred CCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 009871 411 NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 411 ~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
.++||+|+.. ........+++.+.++| +|||.+++...
T Consensus 145 ~~~fD~I~~d---~~~~~~~~~l~~~~~~L---------~pGG~lv~d~~ 182 (237)
T 3c3y_A 145 EGSYDFGFVD---ADKPNYIKYHERLMKLV---------KVGGIVAYDNT 182 (237)
T ss_dssp TTCEEEEEEC---SCGGGHHHHHHHHHHHE---------EEEEEEEEECT
T ss_pred CCCcCEEEEC---CchHHHHHHHHHHHHhc---------CCCeEEEEecC
Confidence 4689999975 34556788999999999 67998887543
No 374
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.96 E-value=2.7e-10 Score=107.62 Aligned_cols=115 Identities=6% Similarity=0.055 Sum_probs=79.6
Q ss_pred CCCeEEEECCCccccHHHHHhh----CCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCc-cCCCCCCCceeE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAA----YPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDD-LSRQISPSSIDI 149 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~----~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~-~~~~~~~~~fD~ 149 (523)
++.+|||||||+|..+..|++. .++++|+|||+|+.|++.|+.. ..+++++++|+.+.. ++ .....+||+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~----~~~v~~~~gD~~~~~~l~-~~~~~~fD~ 155 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD----MENITLHQGDCSDLTTFE-HLREMAHPL 155 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG----CTTEEEEECCSSCSGGGG-GGSSSCSSE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc----CCceEEEECcchhHHHHH-hhccCCCCE
Confidence 4679999999999999999987 6788999999999999888732 367999999998631 11 122347999
Q ss_pred EEEccccc-cceeeecce--EEecCCeEEEe--------eCHHHHHHHHHhC--CCcE
Q 009871 150 VTMERLTG-KDQKISENF--YVRGDGTRAFY--------FSNDFLTSLFKEN--GFDV 194 (523)
Q Consensus 150 V~~~~~~~-~~~~~~~~~--~~~~~g~~~~~--------~~~~~l~~ll~~~--Gf~~ 194 (523)
|++..... ....+.... .++++|.+++. +..+.+.+++++. +|..
T Consensus 156 I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 156 IFIDNAHANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp EEEESSCSSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred EEECCchHhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 99811100 001111111 57788887772 3556788888877 4654
No 375
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.96 E-value=4.4e-10 Score=109.43 Aligned_cols=76 Identities=13% Similarity=0.159 Sum_probs=62.8
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc------CCCcEEEEEeeccCCccCCCCCCCce
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF------TETRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~------~~~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
+++.+|||||||+|..+..+++..+..+|++||+|+.|++.|+++... ..++++++++|+... + ...+++|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~-l--~~~~~~f 158 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF-V--NQTSQTF 158 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC------CCCCCE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHH-H--hhcCCCc
Confidence 567899999999999999999887678899999999999999997532 246899999998753 1 2246789
Q ss_pred eEEEE
Q 009871 148 DIVTM 152 (523)
Q Consensus 148 D~V~~ 152 (523)
|+|++
T Consensus 159 DvIi~ 163 (294)
T 3adn_A 159 DVIIS 163 (294)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99999
No 376
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.95 E-value=9.9e-10 Score=102.93 Aligned_cols=76 Identities=11% Similarity=0.120 Sum_probs=63.2
Q ss_pred CCCCCeEEEECCCccccHHHHHhhC-----CCCEEEEEeCCHHHHHHHHhccccC------CCcEEEEEeeccCCccCCC
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAY-----PDVFVYACDFSPRAVNLVMTHKDFT------ETRVSTFVCDLISDDLSRQ 141 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~-----~~~~v~gvD~S~~~l~~a~~~~~~~------~~~v~~~~~d~~~~~~~~~ 141 (523)
..++.+|||||||+|..+..+++.. |..+|+|+|+|+.+++.|+++.... ..++++.++|+... .
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~ 153 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQV----N 153 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGC----C
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhc----c
Confidence 3567899999999999999999885 4578999999999999999876432 35799999999864 2
Q ss_pred ----CCCCceeEEEE
Q 009871 142 ----ISPSSIDIVTM 152 (523)
Q Consensus 142 ----~~~~~fD~V~~ 152 (523)
...++||+|++
T Consensus 154 ~~~~~~~~~fD~I~~ 168 (227)
T 2pbf_A 154 EEEKKELGLFDAIHV 168 (227)
T ss_dssp HHHHHHHCCEEEEEE
T ss_pred cccCccCCCcCEEEE
Confidence 34578999988
No 377
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.95 E-value=1.1e-09 Score=117.42 Aligned_cols=78 Identities=14% Similarity=0.243 Sum_probs=65.5
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhhC-CCCEEEEEeCCHHHHHHHHhccc-------cCCCcEEEEEeeccCCccCCCC
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKD-------FTETRVSTFVCDLISDDLSRQI 142 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~gvD~S~~~l~~a~~~~~-------~~~~~v~~~~~d~~~~~~~~~~ 142 (523)
+...++.+|||||||+|.++..|++.+ +..+|+|||+|+.|++.|+++.. ....+++++++|+.++ ++
T Consensus 717 L~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dL----p~ 792 (950)
T 3htx_A 717 IRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEF----DS 792 (950)
T ss_dssp HHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSC----CT
T ss_pred hcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhC----Cc
Confidence 333578899999999999999999986 45789999999999999988432 1235799999999987 66
Q ss_pred CCCceeEEEE
Q 009871 143 SPSSIDIVTM 152 (523)
Q Consensus 143 ~~~~fD~V~~ 152 (523)
++++||+|++
T Consensus 793 ~d~sFDlVV~ 802 (950)
T 3htx_A 793 RLHDVDIGTC 802 (950)
T ss_dssp TSCSCCEEEE
T ss_pred ccCCeeEEEE
Confidence 7889999999
No 378
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.95 E-value=8.7e-10 Score=107.37 Aligned_cols=91 Identities=15% Similarity=0.236 Sum_probs=71.2
Q ss_pred hhHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCcc-CC
Q 009871 62 YLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDL-SR 140 (523)
Q Consensus 62 ~l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~-~~ 140 (523)
.+..+..+.+...++.+|||+|||+|.++..+++++++.+|+|+|+|+.|++.|+++....+.+++++++|+.++.. ..
T Consensus 13 vLl~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 13 VMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLK 92 (301)
T ss_dssp TTHHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHH
Confidence 45556656666667889999999999999999999877899999999999999999875444689999999976520 00
Q ss_pred CCCCCceeEEEE
Q 009871 141 QISPSSIDIVTM 152 (523)
Q Consensus 141 ~~~~~~fD~V~~ 152 (523)
....++||.|++
T Consensus 93 ~~g~~~~D~Vl~ 104 (301)
T 1m6y_A 93 TLGIEKVDGILM 104 (301)
T ss_dssp HTTCSCEEEEEE
T ss_pred hcCCCCCCEEEE
Confidence 011157999976
No 379
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.95 E-value=1.1e-08 Score=93.80 Aligned_cols=141 Identities=13% Similarity=0.175 Sum_probs=88.8
Q ss_pred hHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcC---CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEee
Q 009871 319 SAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS---ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 395 (523)
Q Consensus 319 ~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~---~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~l 395 (523)
++..|.+.+.....+.++.+|||||||+|.++..++... ..+|+++|+++.+ . ..++.+...
T Consensus 6 ~~~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~----~~~v~~~~~ 70 (201)
T 2plw_A 6 AAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P----IPNVYFIQG 70 (201)
T ss_dssp THHHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C----CTTCEEEEC
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C----CCCceEEEc
Confidence 455566665554444577899999999999999888874 3689999999831 0 134566666
Q ss_pred ecCCCC-----------------cchhhh-hhcCCCccEEEEccccCCCC----Ch-------HHHHHHHHHHhhccCCC
Q 009871 396 EWGNRD-----------------HIEAIK-EENNEGFEVILGTDVSYIPE----AI-------LPLFATAKELTASSNKS 446 (523)
Q Consensus 396 dw~~~~-----------------~~~~~~-~~~~~~fD~Ii~~d~~y~~~----~~-------~~l~~~l~~ll~~~~~~ 446 (523)
|+.+.. ....+. .++..+||+|++.-.+.... .. ..+++.+.++|
T Consensus 71 d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~L------ 144 (201)
T 2plw_A 71 EIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYI------ 144 (201)
T ss_dssp CTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHE------
T ss_pred cccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHc------
Confidence 665432 000011 13456899999865544321 11 23778888999
Q ss_pred CCCCCCcEEEEEEeecCCChhHHHHHHHHcCCEEEEEcC
Q 009871 447 LREDQQPAFILCHIFRQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 447 ~~~~~~g~~~l~~~~r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
+|||.+++.... ......+...++. .|....+..
T Consensus 145 ---kpgG~lv~~~~~-~~~~~~l~~~l~~-~f~~v~~~~ 178 (201)
T 2plw_A 145 ---NIGGTYIVKMYL-GSQTNNLKTYLKG-MFQLVHTTK 178 (201)
T ss_dssp ---EEEEEEEEEEEC-STTHHHHHHHHHT-TEEEEEECC
T ss_pred ---cCCCEEEEEEeC-CCCHHHHHHHHHH-HHheEEEEC
Confidence 679998875433 3344556666655 466555544
No 380
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.95 E-value=6.4e-10 Score=102.33 Aligned_cols=75 Identities=12% Similarity=0.109 Sum_probs=60.4
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC---CcEEEEEeeccCCccCCCCCCCc-eeEE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE---TRVSTFVCDLISDDLSRQISPSS-IDIV 150 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~-fD~V 150 (523)
++.+|||+|||+|.++..+++++ ..+|+|+|+|+.|++.|+++....+ .+++++++|+.+. ...+++++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDF--LKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHH--TTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHH--HHhhccCCCCCEE
Confidence 56899999999999999877774 2579999999999999999875443 5899999998753 11123578 9999
Q ss_pred EE
Q 009871 151 TM 152 (523)
Q Consensus 151 ~~ 152 (523)
++
T Consensus 130 ~~ 131 (201)
T 2ift_A 130 FL 131 (201)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 381
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.95 E-value=2.2e-09 Score=108.07 Aligned_cols=125 Identities=14% Similarity=0.068 Sum_probs=86.6
Q ss_pred CCCeEEEECCCccHHHHHHHhc--CCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCc-eEEEeeecCCCCcchhhh-hhc
Q 009871 335 AGKKVLELGCGCGGICSMVAAG--SADLVVATDGDSIALDLLAQNVTANLKPPFLAK-LITKRLEWGNRDHIEAIK-EEN 410 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~--~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~-v~~~~ldw~~~~~~~~~~-~~~ 410 (523)
+|.+|||++||+|.+++.+++. ++.+|+++|+++.+++.+++|++.|++. .+ +.+...|-. .-+. .+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~---~~~v~v~~~Da~-----~~l~~~~- 122 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP---EDRYEIHGMEAN-----FFLRKEW- 122 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC---GGGEEEECSCHH-----HHHHSCC-
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC---CceEEEEeCCHH-----HHHHHhh-
Confidence 5789999999999999998885 4579999999999999999999999875 33 665543321 1111 11
Q ss_pred CCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-CChhHHHHHHHHcCCEEE
Q 009871 411 NEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-VDEPSMLSAATQCGFRLV 481 (523)
Q Consensus 411 ~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-~~~~~~~~~~~~~gf~~~ 481 (523)
...||+|+.. . | .....+++.+.++| +++|.++++..... .........++++|....
T Consensus 123 ~~~fD~V~lD-P-~--g~~~~~l~~a~~~L---------k~gGll~~t~t~~~~l~g~~~~~~~rkYg~~p~ 181 (392)
T 3axs_A 123 GFGFDYVDLD-P-F--GTPVPFIESVALSM---------KRGGILSLTATDTAPLSGTYPKTCMRRYMARPL 181 (392)
T ss_dssp SSCEEEEEEC-C-S--SCCHHHHHHHHHHE---------EEEEEEEEEECCHHHHTTSSHHHHHHHHSSBCC
T ss_pred CCCCcEEEEC-C-C--cCHHHHHHHHHHHh---------CCCCEEEEEecchhhhccccHHHHHHHhCCccc
Confidence 4589999985 4 4 33467888888889 56888877663211 000133455566666543
No 382
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.95 E-value=6.9e-10 Score=102.17 Aligned_cols=74 Identities=11% Similarity=0.090 Sum_probs=60.4
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
++.+|||+|||+|.++..+++++. .+|+|+|+|+.|++.|+++....+ .+++++++|+.+. + +..+++||+|++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~-~--~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSF-L--AQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHH-H--SSCCCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHH-H--hhcCCCCCEEEE
Confidence 468999999999999998877742 479999999999999999875433 5899999998752 1 334678999988
No 383
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.95 E-value=7.9e-09 Score=99.18 Aligned_cols=114 Identities=18% Similarity=0.241 Sum_probs=84.1
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
.++.+|||+|||+|.++..+++.+ .++|+|+|+||.+++.++++...+ ..+++++++|+.+. .+.+.||.|+
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~-----~~~~~~D~Vi 197 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF-----PGENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC-----CCCSCEEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHh-----ccccCCCEEE
Confidence 478999999999999999999885 468999999999999999987654 35799999999865 2467899999
Q ss_pred E------ccccccceeeecceEEecCCeEEEe-e---------CHHHHHHHHHhCCCcEEEEE
Q 009871 152 M------ERLTGKDQKISENFYVRGDGTRAFY-F---------SNDFLTSLFKENGFDVEELG 198 (523)
Q Consensus 152 ~------~~~~~~~~~~~~~~~~~~~g~~~~~-~---------~~~~l~~ll~~~Gf~~~~~~ 198 (523)
+ ..|+...-. .++++|...++ + ..+.+.++.++.|+.+..+.
T Consensus 198 ~~~p~~~~~~l~~a~~-----~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~~ 255 (278)
T 3k6r_A 198 MGYVVRTHEFIPKALS-----IAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLN 255 (278)
T ss_dssp ECCCSSGGGGHHHHHH-----HEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred ECCCCcHHHHHHHHHH-----HcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEEEE
Confidence 8 222221111 45666654332 1 24567888889999865443
No 384
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.94 E-value=1.5e-09 Score=105.30 Aligned_cols=123 Identities=17% Similarity=0.190 Sum_probs=77.4
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeC-CHHHHHHHHhcc-----ccCC------CcEEEEEeeccCC--ccC
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDF-SPRAVNLVMTHK-----DFTE------TRVSTFVCDLISD--DLS 139 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~-S~~~l~~a~~~~-----~~~~------~~v~~~~~d~~~~--~~~ 139 (523)
.++.+|||||||+|.++..+++.+ ..+|+|+|+ |+.|++.|+++. ...+ .++++...|..+. ++.
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 467899999999999999888874 348999999 899999999986 3221 2577777666532 010
Q ss_pred CCCCCCceeEEEEcccccc---ceeeec--ceEEe---c--CCeEEEeeC---------HHHHHHHHHhCC-CcEEEE
Q 009871 140 RQISPSSIDIVTMERLTGK---DQKISE--NFYVR---G--DGTRAFYFS---------NDFLTSLFKENG-FDVEEL 197 (523)
Q Consensus 140 ~~~~~~~fD~V~~~~~~~~---~~~~~~--~~~~~---~--~g~~~~~~~---------~~~l~~ll~~~G-f~~~~~ 197 (523)
..+++++||+|++...... ...+.. ...++ + +|..+..++ ..++.+.+++.| |.+..+
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEPW 234 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEEE
T ss_pred hhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEEe
Confidence 0013578999998111000 000000 01355 6 665443322 345667888999 998766
No 385
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.94 E-value=4.7e-09 Score=101.29 Aligned_cols=113 Identities=10% Similarity=0.054 Sum_probs=83.4
Q ss_pred CCCeEEEECCCc---cHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcc---hhh-
Q 009871 335 AGKKVLELGCGC---GGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI---EAI- 406 (523)
Q Consensus 335 ~~~~VLElG~G~---G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~---~~~- 406 (523)
...+|||||||+ |.+...+.+.. ..+|+++|+|+.|++.+++++.. ..++.+...|..+.... ..+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------DPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT------CTTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC------CCCeEEEEeeCCCchhhhccchhh
Confidence 347999999999 96665555543 45899999999999999998743 14577777766543111 000
Q ss_pred hhhcCCCccEEEEccccCCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 009871 407 KEENNEGFEVILGTDVSYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFR 462 (523)
Q Consensus 407 ~~~~~~~fD~Ii~~d~~y~~~~--~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r 462 (523)
..+...+||+|+++.++++... ...+++.+.++| +|||.++++....
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L---------~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDAL---------APGSYLFMTSLVD 199 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHS---------CTTCEEEEEEEBC
T ss_pred ccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhC---------CCCcEEEEEEecC
Confidence 1123358999999999987554 899999999999 7899999988764
No 386
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.94 E-value=3.4e-09 Score=100.53 Aligned_cols=115 Identities=16% Similarity=0.164 Sum_probs=82.6
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCcee
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++..... .++++.++|+.+. .+++++||
T Consensus 87 ~~~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~D 160 (248)
T 2yvl_A 87 LNLNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDA----EVPEGIFH 160 (248)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTS----CCCTTCBS
T ss_pred cCCCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhc----ccCCCccc
Confidence 34457889999999999999999988 6789999999999999999764332 5799999999764 22567899
Q ss_pred EEEEc-----cccccceeeecceEEecCCeEEEeeC-HH---HHHHHHHhCCCcEEEE
Q 009871 149 IVTME-----RLTGKDQKISENFYVRGDGTRAFYFS-ND---FLTSLFKENGFDVEEL 197 (523)
Q Consensus 149 ~V~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~-~~---~l~~ll~~~Gf~~~~~ 197 (523)
+|++. .++....+ .++++|.++.... .+ ++.+.+.+. |..++.
T Consensus 161 ~v~~~~~~~~~~l~~~~~-----~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~~~~~ 212 (248)
T 2yvl_A 161 AAFVDVREPWHYLEKVHK-----SLMEGAPVGFLLPTANQVIKLLESIENY-FGNLEV 212 (248)
T ss_dssp EEEECSSCGGGGHHHHHH-----HBCTTCEEEEEESSHHHHHHHHHHSTTT-EEEEEE
T ss_pred EEEECCcCHHHHHHHHHH-----HcCCCCEEEEEeCCHHHHHHHHHHHHhh-CCcceE
Confidence 99981 22222222 5788888877553 33 445555555 654433
No 387
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.94 E-value=1.7e-09 Score=108.49 Aligned_cols=113 Identities=19% Similarity=0.263 Sum_probs=81.7
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE-
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM- 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~- 152 (523)
.+..+|||||||+|..+..+++++|+.+++|+|+ +.|++.|++. .+++++.+|+.+ +++ .||+|++
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~p--~~D~v~~~ 253 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-----NNLTYVGGDMFT-----SIP--NADAVLLK 253 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-----TTEEEEECCTTT-----CCC--CCSEEEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-----CCcEEEeccccC-----CCC--CccEEEee
Confidence 4568999999999999999999999999999999 9999888763 359999999964 233 3999999
Q ss_pred ------------------cccccc---ceeeecceEEec-CCeE------------------EEeeCHHHHHHHHHhCCC
Q 009871 153 ------------------ERLTGK---DQKISENFYVRG-DGTR------------------AFYFSNDFLTSLFKENGF 192 (523)
Q Consensus 153 ------------------~~~~~~---~~~~~~~~~~~~-~g~~------------------~~~~~~~~l~~ll~~~Gf 192 (523)
.+.+++ ++++.-.....+ .+.. -..++.+++.++++++||
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf 333 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGF 333 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTC
T ss_pred hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCC
Confidence 233344 444321111111 1100 012478999999999999
Q ss_pred cEEEEEe
Q 009871 193 DVEELGL 199 (523)
Q Consensus 193 ~~~~~~~ 199 (523)
..+++..
T Consensus 334 ~~~~~~~ 340 (352)
T 1fp2_A 334 QHYKISP 340 (352)
T ss_dssp CEEEEEE
T ss_pred CeeEEEe
Confidence 9887754
No 388
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.94 E-value=2.6e-09 Score=103.11 Aligned_cols=75 Identities=20% Similarity=0.262 Sum_probs=64.3
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
..++.+|||+|||+|.++..+++.+++.+|+|+|+|+.|++.|+++...++ .++.++++|+.+. +. .++||+|+
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~----~~-~~~~D~Vi 191 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV----EL-KDVADRVI 191 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC----CC-TTCEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc----Cc-cCCceEEE
Confidence 356789999999999999999999777789999999999999999875443 5789999999865 22 56899999
Q ss_pred E
Q 009871 152 M 152 (523)
Q Consensus 152 ~ 152 (523)
+
T Consensus 192 ~ 192 (272)
T 3a27_A 192 M 192 (272)
T ss_dssp E
T ss_pred E
Confidence 9
No 389
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.93 E-value=3.2e-09 Score=104.76 Aligned_cols=132 Identities=14% Similarity=0.093 Sum_probs=88.1
Q ss_pred CCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHHh--cCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 335 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTA--NLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~~--n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
++++|||||||+|.++..+++. +..+|+++|+|+.+++.+++|+.. ++.. ..++.+...|+.+. + ...+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~--~~~v~~~~~D~~~~-----l-~~~~ 187 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYE--DKRVNVFIEDASKF-----L-ENVT 187 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG--STTEEEEESCHHHH-----H-HHCC
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC--CCcEEEEEccHHHH-----H-hhcC
Confidence 4579999999999888888877 457999999999999999999765 2221 24677765554321 1 1124
Q ss_pred CCccEEEEcccc-CC-CCCh--HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCCh---hHHHHHHHHcCCEEEEEc
Q 009871 412 EGFEVILGTDVS-YI-PEAI--LPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDE---PSMLSAATQCGFRLVDKW 484 (523)
Q Consensus 412 ~~fD~Ii~~d~~-y~-~~~~--~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~---~~~~~~~~~~gf~~~~~~ 484 (523)
++||+|++.-.- +. .... ..+++.+.++| +|||.+++......... ..+.+.+++. |.....+
T Consensus 188 ~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~L---------kpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~ 257 (321)
T 2pt6_A 188 NTYDVIIVDSSDPIGPAETLFNQNFYEKIYNAL---------KPNGYCVAQCESLWIHVGTIKNMIGYAKKL-FKKVEYA 257 (321)
T ss_dssp SCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHE---------EEEEEEEEEECCTTTCHHHHHHHHHHHHTT-CSEEEEE
T ss_pred CCceEEEECCcCCCCcchhhhHHHHHHHHHHhc---------CCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CCCeEEE
Confidence 689999984211 11 1111 78899999999 67999988754433333 2445556555 4444443
No 390
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.93 E-value=2.3e-09 Score=106.84 Aligned_cols=74 Identities=19% Similarity=0.193 Sum_probs=62.5
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
..++.+|||||||+|.++..+++.+ ..+|+|+|+|+ |++.|+++....+ .+++++++|+.++ ++++++||+|
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~~~~~~~D~I 135 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV----HLPVEKVDVI 135 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS----CCSCSCEEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh----cCCCCcEEEE
Confidence 3567899999999999999998873 45899999997 9999998764332 6899999999977 5667899999
Q ss_pred EE
Q 009871 151 TM 152 (523)
Q Consensus 151 ~~ 152 (523)
++
T Consensus 136 vs 137 (340)
T 2fyt_A 136 IS 137 (340)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 391
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.93 E-value=2.7e-09 Score=107.86 Aligned_cols=115 Identities=15% Similarity=0.139 Sum_probs=83.9
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccC-CccCCCC-CCCceeEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLIS-DDLSRQI-SPSSIDIV 150 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~-~~~~~~~-~~~~fD~V 150 (523)
.++.+|||+| |+|.++..++..+++.+|+|+|+|+.|++.|+++....+ .+++++++|+.+ + +. .+++||+|
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l----~~~~~~~fD~V 245 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPL----PDYALHKFDTF 245 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCC----CTTTSSCBSEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhc----hhhccCCccEE
Confidence 3578999999 999999999988776799999999999999999875332 379999999986 3 22 35689999
Q ss_pred EEc-cc--------cccceeeecceEEecCCeE-EEee-----CH---HHHHHHHH-hCCCcEEEEE
Q 009871 151 TME-RL--------TGKDQKISENFYVRGDGTR-AFYF-----SN---DFLTSLFK-ENGFDVEELG 198 (523)
Q Consensus 151 ~~~-~~--------~~~~~~~~~~~~~~~~g~~-~~~~-----~~---~~l~~ll~-~~Gf~~~~~~ 198 (523)
++. .+ +....+ .++++|.. ++-. +. .++.+.+. ..||....+.
T Consensus 246 i~~~p~~~~~~~~~l~~~~~-----~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 307 (373)
T 2qm3_A 246 ITDPPETLEAIRAFVGRGIA-----TLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVITDII 307 (373)
T ss_dssp EECCCSSHHHHHHHHHHHHH-----TBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred EECCCCchHHHHHHHHHHHH-----HcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcchhhhh
Confidence 992 11 111112 56778843 3322 34 67778887 8898775443
No 392
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.93 E-value=1.6e-09 Score=103.39 Aligned_cols=77 Identities=12% Similarity=0.084 Sum_probs=62.1
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCC---CCceeE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQIS---PSSIDI 149 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~---~~~fD~ 149 (523)
++.+|||+|||+|.++..++++.++.+|+|+|+|+.|++.|+++....+ .+++++++|+.+. +..+++ +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL-LMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS-STTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhh-hhhhhhcccCCcccE
Confidence 5679999999999999999988777899999999999999999875432 3599999998652 111233 368999
Q ss_pred EEE
Q 009871 150 VTM 152 (523)
Q Consensus 150 V~~ 152 (523)
|++
T Consensus 144 i~~ 146 (254)
T 2h00_A 144 CMC 146 (254)
T ss_dssp EEE
T ss_pred EEE
Confidence 999
No 393
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.93 E-value=7.6e-10 Score=103.37 Aligned_cols=120 Identities=13% Similarity=0.174 Sum_probs=78.1
Q ss_pred CCCCeEEEECCCccccHHHHHhhC-CCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCC--ccCCCCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAY-PDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISD--DLSRQISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~--~~~~~~~~~~fD 148 (523)
.++.+|||||||+|..+..+++.. ++++|+|+|+|+.|++.|+++....+ .+++++++|+.+. .+...+..++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 457899999999999999999875 47899999999999999999764332 4699999998542 111112237899
Q ss_pred EEEEc----cccccceeeecceEEecCCeEEEe----eCHHHHHHHHHhC-CCc
Q 009871 149 IVTME----RLTGKDQKISENFYVRGDGTRAFY----FSNDFLTSLFKEN-GFD 193 (523)
Q Consensus 149 ~V~~~----~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~l~~ll~~~-Gf~ 193 (523)
+|++. .+......+...-.++++|.+++. ....++.+.+.+. +|.
T Consensus 137 ~V~~d~~~~~~~~~~~~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~ 190 (221)
T 3u81_A 137 MVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLADNVIVPGTPDFLAYVRGSSSFE 190 (221)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCCCTTCEEEESCCCCCCCHHHHHHHHHCTTEE
T ss_pred EEEEcCCcccchHHHHHHHhccccCCCeEEEEeCCCCcchHHHHHHHhhCCCce
Confidence 99991 110000000000157788877652 1234555555544 344
No 394
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.92 E-value=5.4e-10 Score=106.38 Aligned_cols=78 Identities=14% Similarity=0.203 Sum_probs=62.9
Q ss_pred CCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCceeEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
.++.+|||||||+|..+..+++..| +.+|+|+|+|+.+++.|+++.... ..+++++++|+.+. ++.....++||+|
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-l~~~~~~~~fD~V 140 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQS-LESLGECPAFDLI 140 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH-HHTCCSCCCCSEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH-HHhcCCCCCeEEE
Confidence 4678999999999999999999876 789999999999999999986433 24799999998752 1111123589999
Q ss_pred EE
Q 009871 151 TM 152 (523)
Q Consensus 151 ~~ 152 (523)
++
T Consensus 141 ~~ 142 (248)
T 3tfw_A 141 FI 142 (248)
T ss_dssp EE
T ss_pred EE
Confidence 97
No 395
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.92 E-value=4.4e-09 Score=106.33 Aligned_cols=113 Identities=15% Similarity=0.239 Sum_probs=81.8
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE-
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM- 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~- 152 (523)
.+..+|||||||+|..+..+++++|+.+++++|+ +.|++.|++. .+++++.+|+.+ +++. ||+|++
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~~~--~D~v~~~ 274 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-----SGIEHVGGDMFA-----SVPQ--GDAMILK 274 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-----CCCC--EEEEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-----CCCEEEeCCccc-----CCCC--CCEEEEe
Confidence 4678999999999999999999999999999999 9999887763 469999999975 2333 999999
Q ss_pred ------------------ccccccceeeecceEEecCCeE--------------------EEeeCHHHHHHHHHhCCCcE
Q 009871 153 ------------------ERLTGKDQKISENFYVRGDGTR--------------------AFYFSNDFLTSLFKENGFDV 194 (523)
Q Consensus 153 ------------------~~~~~~~~~~~~~~~~~~~g~~--------------------~~~~~~~~l~~ll~~~Gf~~ 194 (523)
.+.+++++++.-.....++... -..++.+++.++|+++||.+
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 354 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSK 354 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCce
Confidence 2223444433221111111100 01247899999999999998
Q ss_pred EEEEe
Q 009871 195 EELGL 199 (523)
Q Consensus 195 ~~~~~ 199 (523)
+++..
T Consensus 355 ~~~~~ 359 (372)
T 1fp1_D 355 FQVAC 359 (372)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87754
No 396
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.92 E-value=2.4e-09 Score=100.84 Aligned_cols=107 Identities=14% Similarity=0.111 Sum_probs=80.4
Q ss_pred CCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhc--
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEEN-- 410 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~-- 410 (523)
++++|||+|||+|..+..++... ..+|+++|+++.+++.+++|+..++.. .++.+...+..+ .+..+.
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~---~~i~~~~~d~~~-----~l~~l~~~ 143 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA---EKISLRLGPALA-----TLEQLTQG 143 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG---GGEEEEESCHHH-----HHHHHHTS
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEEcCHHH-----HHHHHHhc
Confidence 56799999999998888887763 358999999999999999999987764 456665544321 111221
Q ss_pred C--CCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 411 N--EGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 411 ~--~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
+ ++||+|++.. .......+++.+.++| +|||.+++....
T Consensus 144 ~~~~~fD~V~~d~---~~~~~~~~l~~~~~~L---------kpgG~lv~~~~~ 184 (232)
T 3cbg_A 144 KPLPEFDLIFIDA---DKRNYPRYYEIGLNLL---------RRGGLMVIDNVL 184 (232)
T ss_dssp SSCCCEEEEEECS---CGGGHHHHHHHHHHTE---------EEEEEEEEECTT
T ss_pred CCCCCcCEEEECC---CHHHHHHHHHHHHHHc---------CCCeEEEEeCCC
Confidence 2 6899999752 2456788899999999 679999886544
No 397
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.92 E-value=8.5e-10 Score=106.03 Aligned_cols=111 Identities=14% Similarity=0.080 Sum_probs=77.8
Q ss_pred CCCeEEEECCCccH----HHHHHHhc-C----CCEEEEEcCChHHHHHHHHHHHhc----CCC-------------C-C-
Q 009871 335 AGKKVLELGCGCGG----ICSMVAAG-S----ADLVVATDGDSIALDLLAQNVTAN----LKP-------------P-F- 386 (523)
Q Consensus 335 ~~~~VLElG~G~G~----l~~~~a~~-~----~~~V~~~D~~~~~l~~~~~n~~~n----~~~-------------~-~- 386 (523)
++.+|||+|||||. ++..++.. + ..+|+|||+|+.||+.|++++... +++ . .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35699999999996 55555554 3 248999999999999999875210 000 0 0
Q ss_pred --------CCceEEEeeecCCCCcchhhhhhc-CCCccEEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEE
Q 009871 387 --------LAKLITKRLEWGNRDHIEAIKEEN-NEGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAF 455 (523)
Q Consensus 387 --------~~~v~~~~ldw~~~~~~~~~~~~~-~~~fD~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~ 455 (523)
...|.+...|+.+. +++ .++||+|+|..++.+.+ ....+++.+.+.| +|||.+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~-------~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L---------~pgG~L 248 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK-------QYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLL---------KPDGLL 248 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS-------SCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGE---------EEEEEE
T ss_pred ceeechhhcccCeEEecccCCC-------CCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHh---------CCCcEE
Confidence 02577777777652 111 35899999998875433 4478999999999 679999
Q ss_pred EEEEee
Q 009871 456 ILCHIF 461 (523)
Q Consensus 456 ~l~~~~ 461 (523)
++.+..
T Consensus 249 ~lg~sE 254 (274)
T 1af7_A 249 FAGHSE 254 (274)
T ss_dssp EECTTC
T ss_pred EEEecc
Confidence 986543
No 398
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.91 E-value=1.1e-08 Score=93.34 Aligned_cols=140 Identities=16% Similarity=0.109 Sum_probs=86.0
Q ss_pred HHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhc-CC---------CEEEEEcCChHHHHHHHHHHHhcCCCCCCCc
Q 009871 320 AHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAG-SA---------DLVVATDGDSIALDLLAQNVTANLKPPFLAK 389 (523)
Q Consensus 320 a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~-~~---------~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~ 389 (523)
+..|.+.......+.++.+|||||||+|.++..++.. +. .+|+++|+++.+ .. ..
T Consensus 7 ~~kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~----~~ 71 (196)
T 2nyu_A 7 AFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL----EG 71 (196)
T ss_dssp HHHHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC----TT
T ss_pred HHHHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC----CC
Confidence 3445555544444557889999999999999888887 43 689999999831 11 23
Q ss_pred eEEE-eeecCCCCcchhhh-hhcCCCccEEEEccccCCCCCh-----------HHHHHHHHHHhhccCCCCCCCCCcEEE
Q 009871 390 LITK-RLEWGNRDHIEAIK-EENNEGFEVILGTDVSYIPEAI-----------LPLFATAKELTASSNKSLREDQQPAFI 456 (523)
Q Consensus 390 v~~~-~ldw~~~~~~~~~~-~~~~~~fD~Ii~~d~~y~~~~~-----------~~l~~~l~~ll~~~~~~~~~~~~g~~~ 456 (523)
+.+. ..|+.+......+. .++..+||+|++.-........ ..+++.+.++| +|||.++
T Consensus 72 ~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L---------kpgG~lv 142 (196)
T 2nyu_A 72 ATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDIL---------QPGGTFL 142 (196)
T ss_dssp CEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHE---------EEEEEEE
T ss_pred CeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHh---------cCCCEEE
Confidence 4554 44443321111110 1234589999986433322111 47888899999 6799998
Q ss_pred EEEeecCCChhHHHHHHHHcCCEEEEEcC
Q 009871 457 LCHIFRQVDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 457 l~~~~r~~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
+.... ......+...+... |....++.
T Consensus 143 ~~~~~-~~~~~~~~~~l~~~-f~~v~~~~ 169 (196)
T 2nyu_A 143 CKTWA-GSQSRRLQRRLTEE-FQNVRIIK 169 (196)
T ss_dssp EEECC-SGGGHHHHHHHHHH-EEEEEEEC
T ss_pred EEecC-CccHHHHHHHHHHH-hcceEEEC
Confidence 87543 23344566666654 55555544
No 399
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.91 E-value=7.3e-09 Score=107.25 Aligned_cols=145 Identities=17% Similarity=0.083 Sum_probs=97.0
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcC-C-CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEee
Q 009871 318 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS-A-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 395 (523)
Q Consensus 318 ~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~-~-~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~l 395 (523)
.++.+++..+. ..++.+|||+|||+|+.+..++... . .+|+++|+++.+++.+++|+..++.. ++.+...
T Consensus 246 ~~s~l~~~~l~----~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~----~v~~~~~ 317 (450)
T 2yxl_A 246 EASAVASIVLD----PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK----IVKPLVK 317 (450)
T ss_dssp HHHHHHHHHHC----CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC----SEEEECS
T ss_pred chhHHHHHhcC----CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC----cEEEEEc
Confidence 45555566552 3467899999999999999888863 3 68999999999999999999998763 4666655
Q ss_pred ecCCCCcchhhhhhcCCCccEEEEc------cccCCC---------CCh-------HHHHHHHHHHhhccCCCCCCCCCc
Q 009871 396 EWGNRDHIEAIKEENNEGFEVILGT------DVSYIP---------EAI-------LPLFATAKELTASSNKSLREDQQP 453 (523)
Q Consensus 396 dw~~~~~~~~~~~~~~~~fD~Ii~~------d~~y~~---------~~~-------~~l~~~l~~ll~~~~~~~~~~~~g 453 (523)
|..+... .+.+++||+|++. .++... +.+ ..+++.+.++| +|||
T Consensus 318 D~~~~~~-----~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~L---------kpGG 383 (450)
T 2yxl_A 318 DARKAPE-----IIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLV---------KPGG 383 (450)
T ss_dssp CTTCCSS-----SSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTE---------EEEE
T ss_pred Chhhcch-----hhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhc---------CCCc
Confidence 5443211 1223689999962 222211 122 56788888888 6799
Q ss_pred EEEEEEeecCCC--hhHHHHHHHHc-CCEEEEEc
Q 009871 454 AFILCHIFRQVD--EPSMLSAATQC-GFRLVDKW 484 (523)
Q Consensus 454 ~~~l~~~~r~~~--~~~~~~~~~~~-gf~~~~~~ 484 (523)
.++++...-... +..+...++++ +|++..+.
T Consensus 384 ~lvy~tcs~~~~ene~~v~~~l~~~~~~~~~~~~ 417 (450)
T 2yxl_A 384 RLLYTTCSIFKEENEKNIRWFLNVHPEFKLVPLK 417 (450)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHCSSCEECCCC
T ss_pred EEEEEeCCCChhhHHHHHHHHHHhCCCCEEeecc
Confidence 998765543222 23344455665 78876554
No 400
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.91 E-value=6e-10 Score=111.39 Aligned_cols=78 Identities=22% Similarity=0.365 Sum_probs=64.3
Q ss_pred hhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 69 ~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
+.+....+.+|||+|||+|.++..+++.+|+.+|+|+|+|+.|++.|+++.......++++.+|+... .+++||
T Consensus 190 ~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~------~~~~fD 263 (343)
T 2pjd_A 190 STLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE------VKGRFD 263 (343)
T ss_dssp HHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT------CCSCEE
T ss_pred HhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc------ccCCee
Confidence 33433456799999999999999999998888999999999999999998755545567888888643 367899
Q ss_pred EEEE
Q 009871 149 IVTM 152 (523)
Q Consensus 149 ~V~~ 152 (523)
+|++
T Consensus 264 ~Iv~ 267 (343)
T 2pjd_A 264 MIIS 267 (343)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9999
No 401
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.91 E-value=3.9e-09 Score=98.43 Aligned_cols=127 Identities=13% Similarity=0.077 Sum_probs=87.3
Q ss_pred CCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
...+|||||||+|.++..++.. ...+|+++|+|+.|++.++.|+..|++. ..+...|.... .++.+
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~-----~~~~v~D~~~~--------~p~~~ 198 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP-----HRTNVADLLED--------RLDEP 198 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC-----EEEEECCTTTS--------CCCSC
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-----ceEEEeeeccc--------CCCCC
Confidence 3569999999999888877776 5669999999999999999999998874 34444333322 24679
Q ss_pred ccEEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec-----CCCh-----hHHHHHHHHcCCEEE
Q 009871 414 FEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFR-----QVDE-----PSMLSAATQCGFRLV 481 (523)
Q Consensus 414 fD~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r-----~~~~-----~~~~~~~~~~gf~~~ 481 (523)
||+|++..++.+-+ .-..++ .+.+.| +++ .+++++..| .... ..|.+.+.+.|+.+.
T Consensus 199 ~DvaL~lkti~~Le~q~kg~g~-~ll~aL---------~~~-~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~ 267 (281)
T 3lcv_B 199 ADVTLLLKTLPCLETQQRGSGW-EVIDIV---------NSP-NIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQ 267 (281)
T ss_dssp CSEEEETTCHHHHHHHSTTHHH-HHHHHS---------SCS-EEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEE
T ss_pred cchHHHHHHHHHhhhhhhHHHH-HHHHHh---------CCC-CEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCcee
Confidence 99999998877632 223445 455555 334 455666663 3333 234555677899877
Q ss_pred EEcC
Q 009871 482 DKWP 485 (523)
Q Consensus 482 ~~~~ 485 (523)
++.-
T Consensus 268 ~~~~ 271 (281)
T 3lcv_B 268 RLEI 271 (281)
T ss_dssp EEEE
T ss_pred eeee
Confidence 7643
No 402
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.89 E-value=6.9e-10 Score=104.54 Aligned_cols=78 Identities=15% Similarity=0.216 Sum_probs=63.0
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
.++.+|||||||+|..+..+++..|+.+|+|+|+|+.+++.|+++....+ .++++.++|+... ++....+++||+|+
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQL-GEKLELYPLFDVLF 131 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS-HHHHTTSCCEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH-HHhcccCCCccEEE
Confidence 46789999999999999999999888899999999999999999764332 4699999998753 11001157899999
Q ss_pred E
Q 009871 152 M 152 (523)
Q Consensus 152 ~ 152 (523)
+
T Consensus 132 ~ 132 (233)
T 2gpy_A 132 I 132 (233)
T ss_dssp E
T ss_pred E
Confidence 8
No 403
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.89 E-value=7.9e-10 Score=107.80 Aligned_cols=75 Identities=19% Similarity=0.218 Sum_probs=63.0
Q ss_pred CCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 76 RKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 76 ~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
..+|||||||+|.++..+++++|+.+|++||+++.|++.|+++.... ..+++++++|+.+. ...+++++||+|++
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~--l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMV--AESFTPASRDVIIR 165 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHH--HHTCCTTCEEEEEE
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHH--HhhccCCCCCEEEE
Confidence 34999999999999999999888899999999999999999986432 46899999998753 11234678999999
No 404
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.89 E-value=4.5e-08 Score=100.16 Aligned_cols=114 Identities=15% Similarity=0.114 Sum_probs=82.1
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeec
Q 009871 318 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEW 397 (523)
Q Consensus 318 ~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw 397 (523)
..+..|.+++.. ..++.+|||+|||+|.++..++.. +.+|+++|+++.|++.|++|+..|++ . +.+...|.
T Consensus 276 ~~~e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl----~-v~~~~~d~ 346 (425)
T 2jjq_A 276 YQAVNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNV----D-AEFEVASD 346 (425)
T ss_dssp HHHHHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTC----C-EEEEECCT
T ss_pred HHHHHHHHHhhc---cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCC----c-EEEEECCh
Confidence 344455555554 347789999999999888888776 46899999999999999999999876 2 56666555
Q ss_pred CCCCcchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 398 GNRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 398 ~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
.+. ...+||+|++... +. .....+++.+.. | +|+|.+|++...
T Consensus 347 ~~~---------~~~~fD~Vv~dPP-r~-g~~~~~~~~l~~-l---------~p~givyvsc~p 389 (425)
T 2jjq_A 347 REV---------SVKGFDTVIVDPP-RA-GLHPRLVKRLNR-E---------KPGVIVYVSCNP 389 (425)
T ss_dssp TTC---------CCTTCSEEEECCC-TT-CSCHHHHHHHHH-H---------CCSEEEEEESCH
T ss_pred HHc---------CccCCCEEEEcCC-cc-chHHHHHHHHHh-c---------CCCcEEEEECCh
Confidence 432 1227999998533 32 233456777764 6 579999887543
No 405
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.89 E-value=5.1e-09 Score=101.65 Aligned_cols=79 Identities=24% Similarity=0.300 Sum_probs=63.6
Q ss_pred HHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCC
Q 009871 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQIS 143 (523)
Q Consensus 66 ~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~ 143 (523)
.+.+.+...++.+|||||||+|.++..|++. +.+|+|+|+|+.|++.|+++....+ .+++++++|+.+. +++
T Consensus 19 ~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~----~~~ 92 (285)
T 1zq9_A 19 SIIDKAALRPTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT----DLP 92 (285)
T ss_dssp HHHHHTCCCTTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS----CCC
T ss_pred HHHHhcCCCCCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc----cch
Confidence 3334455567889999999999999999998 4579999999999999998764322 5799999999876 333
Q ss_pred CCceeEEEE
Q 009871 144 PSSIDIVTM 152 (523)
Q Consensus 144 ~~~fD~V~~ 152 (523)
+||+|++
T Consensus 93 --~fD~vv~ 99 (285)
T 1zq9_A 93 --FFDTCVA 99 (285)
T ss_dssp --CCSEEEE
T ss_pred --hhcEEEE
Confidence 6999988
No 406
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.88 E-value=6.1e-10 Score=104.06 Aligned_cols=77 Identities=18% Similarity=0.248 Sum_probs=62.0
Q ss_pred CCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCC---CCce
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQIS---PSSI 147 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~---~~~f 147 (523)
.++.+|||||||+|..+..+++..| +++|+|+|+|+.+++.|+++.... ..+++++++|+.+. ++ .++ .++|
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~-~~~~~~~~~f 134 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDS-LQ-QIENEKYEPF 134 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH-HH-HHHHTTCCCC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH-HH-HHHhcCCCCc
Confidence 4678999999999999999999977 789999999999999999876432 24699999998642 10 011 2579
Q ss_pred eEEEE
Q 009871 148 DIVTM 152 (523)
Q Consensus 148 D~V~~ 152 (523)
|+|++
T Consensus 135 D~v~~ 139 (223)
T 3duw_A 135 DFIFI 139 (223)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99998
No 407
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.88 E-value=3.1e-09 Score=105.31 Aligned_cols=120 Identities=14% Similarity=0.030 Sum_probs=79.4
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-C--cEEEEEeeccCCccCCCCCCCceeEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-T--RVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~--~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
.++.+|||+|||+|.++..+++.+ ++|+|||+|+.|++.|+++...++ . +++++++|+.+.........++||+|
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 456799999999999999999874 489999999999999999875332 2 49999999975310000014689999
Q ss_pred EE--ccccc--cc---------eeeec--ceEEecCCeEEEe------eCHHHHHHHHH----hCCCcEE
Q 009871 151 TM--ERLTG--KD---------QKISE--NFYVRGDGTRAFY------FSNDFLTSLFK----ENGFDVE 195 (523)
Q Consensus 151 ~~--~~~~~--~~---------~~~~~--~~~~~~~g~~~~~------~~~~~l~~ll~----~~Gf~~~ 195 (523)
++ ..+.. .. ..+.. .-.++++|.+++. .+.+.+.+++. ++|+.+.
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 99 11210 00 00000 1247888885442 24556666655 6787754
No 408
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.88 E-value=2.3e-09 Score=101.92 Aligned_cols=77 Identities=19% Similarity=0.325 Sum_probs=55.3
Q ss_pred hhhhHHHHhhhhcCCCCCeEEEECCCc--cccHHHHHhh-CCCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccC
Q 009871 60 RHYLDKEWGRYFSGAGRKDVLEVGCGA--GNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLIS 135 (523)
Q Consensus 60 ~~~l~~~~~~~~~~~~~~~iLDiGcG~--G~~~~~l~~~-~~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~ 135 (523)
|.|+.+....+.......+|||||||+ +.++..++++ .|+++|+|||.|+.||+.|+++.... ..++.|+++|+.+
T Consensus 63 r~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~ 142 (277)
T 3giw_A 63 RDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLD 142 (277)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTC
T ss_pred HHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccC
Confidence 444444333333223457899999997 4455555554 78999999999999999999876432 2479999999986
Q ss_pred C
Q 009871 136 D 136 (523)
Q Consensus 136 ~ 136 (523)
.
T Consensus 143 ~ 143 (277)
T 3giw_A 143 P 143 (277)
T ss_dssp H
T ss_pred h
Confidence 4
No 409
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.88 E-value=1.2e-09 Score=98.92 Aligned_cols=78 Identities=10% Similarity=0.010 Sum_probs=60.9
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
.++.+|||+|||+|..+..+++. +..+|+|+|+|+.|++.|+++..... .+++++++|+.+.....++++++||+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 46789999999999999988875 34689999999999999999764432 4799999998753100012267899999
Q ss_pred E
Q 009871 152 M 152 (523)
Q Consensus 152 ~ 152 (523)
+
T Consensus 122 ~ 122 (187)
T 2fhp_A 122 L 122 (187)
T ss_dssp E
T ss_pred E
Confidence 8
No 410
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.88 E-value=3.1e-09 Score=97.42 Aligned_cols=68 Identities=22% Similarity=0.241 Sum_probs=58.6
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
..++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|+++.. +++++++|+.++ + ++||+|++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~~----~---~~~D~v~~ 116 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSEI----S---GKYDTWIM 116 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGGC----C---CCEEEEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHHC----C---CCeeEEEE
Confidence 346789999999999999999887 33479999999999999999864 689999999865 2 68999999
No 411
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.88 E-value=1.3e-08 Score=102.61 Aligned_cols=123 Identities=14% Similarity=0.080 Sum_probs=92.1
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcCC-CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
..++.+|||||||+|.++..+++..+ .+++++|+ +.+++.++.+ .++.+...|..+. ++.
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~--------~p~ 261 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF----------SGVEHLGGDMFDG--------VPK 261 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTC--------CCC
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc----------CCCEEEecCCCCC--------CCC
Confidence 45678999999999998888888754 48999999 8888766531 4677777766532 222
Q ss_pred CCccEEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC--------------------------
Q 009871 412 EGFEVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------------------- 463 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-------------------------- 463 (523)
. |+|++..++++.. ....+++.+.+.| +|||.+++......
T Consensus 262 -~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L---------~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g 330 (368)
T 3reo_A 262 -G-DAIFIKWICHDWSDEHCLKLLKNCYAAL---------PDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGG 330 (368)
T ss_dssp -C-SEEEEESCGGGBCHHHHHHHHHHHHHHS---------CTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBC
T ss_pred -C-CEEEEechhhcCCHHHHHHHHHHHHHHc---------CCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCC
Confidence 3 9999999998654 3458899999999 77999988754321
Q ss_pred --CChhHHHHHHHHcCCEEEEEcC
Q 009871 464 --VDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 464 --~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
.+..++.+.++++||+..++..
T Consensus 331 ~~rt~~e~~~ll~~AGF~~v~~~~ 354 (368)
T 3reo_A 331 KERTEKEFQALAMASGFRGFKVAS 354 (368)
T ss_dssp CCCCHHHHHHHHHHTTCCEEEEEE
T ss_pred ccCCHHHHHHHHHHCCCeeeEEEE
Confidence 1234567778899999988866
No 412
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.88 E-value=4.2e-09 Score=98.68 Aligned_cols=107 Identities=11% Similarity=0.048 Sum_probs=76.8
Q ss_pred CCCCCeEEEECCCccHHHHHHHhc-CC------CEEEEEcCChHHHHHHHHHHHhcCCC-CCCCceEEEeeecCCCCcch
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAG-SA------DLVVATDGDSIALDLLAQNVTANLKP-PFLAKLITKRLEWGNRDHIE 404 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~-~~------~~V~~~D~~~~~l~~~~~n~~~n~~~-~~~~~v~~~~ldw~~~~~~~ 404 (523)
..++.+|||+|||+|.++..++.. +. .+|+++|+++.+++.+++|+..++.. ....++.+...|..+. ..
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--~~ 159 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG--YP 159 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC--CG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccC--CC
Confidence 357889999999999888888875 32 58999999999999999998765410 0003466665554431 10
Q ss_pred hhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 405 AIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 405 ~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
..++||+|++...+.+ +.+.+.++| +|||.+++....
T Consensus 160 -----~~~~fD~I~~~~~~~~------~~~~~~~~L---------kpgG~lvi~~~~ 196 (227)
T 1r18_A 160 -----PNAPYNAIHVGAAAPD------TPTELINQL---------ASGGRLIVPVGP 196 (227)
T ss_dssp -----GGCSEEEEEECSCBSS------CCHHHHHTE---------EEEEEEEEEESC
T ss_pred -----cCCCccEEEECCchHH------HHHHHHHHh---------cCCCEEEEEEec
Confidence 1258999999876654 237788889 679999987754
No 413
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.88 E-value=2.2e-09 Score=101.26 Aligned_cols=81 Identities=17% Similarity=0.187 Sum_probs=63.4
Q ss_pred HHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCC
Q 009871 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISP 144 (523)
Q Consensus 66 ~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~ 144 (523)
.+.+.+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.|+++.... ..++++.++|+. . ++++
T Consensus 82 ~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~-~----~~~~ 155 (235)
T 1jg1_A 82 IMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS-K----GFPP 155 (235)
T ss_dssp HHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG-G----CCGG
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcc-c----CCCC
Confidence 333445556788999999999999999999865 77999999999999999976432 246899999983 3 2333
Q ss_pred -CceeEEEE
Q 009871 145 -SSIDIVTM 152 (523)
Q Consensus 145 -~~fD~V~~ 152 (523)
..||+|++
T Consensus 156 ~~~fD~Ii~ 164 (235)
T 1jg1_A 156 KAPYDVIIV 164 (235)
T ss_dssp GCCEEEEEE
T ss_pred CCCccEEEE
Confidence 35999998
No 414
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.87 E-value=6.7e-10 Score=103.90 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=61.9
Q ss_pred CCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCc--cCCCCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDD--LSRQISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~--~~~~~~~~~fD 148 (523)
.++.+|||||||+|..+..+++..+ +.+|+|+|+|+.|++.|+++.... ..+++++++|+.+.- +......++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 3577999999999999999999876 789999999999999999976433 246999999986420 11011117899
Q ss_pred EEEE
Q 009871 149 IVTM 152 (523)
Q Consensus 149 ~V~~ 152 (523)
+|++
T Consensus 143 ~v~~ 146 (225)
T 3tr6_A 143 LIYI 146 (225)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 415
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.87 E-value=3.9e-09 Score=98.46 Aligned_cols=74 Identities=19% Similarity=0.251 Sum_probs=65.3
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
....+|||||||.|-++..++...|..+|+|+|+++.|++.++++....+...++.+.|.... .+.+.||+|++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~-----~p~~~~DvaL~ 204 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLED-----RLDEPADVTLL 204 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTS-----CCCSCCSEEEE
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeeccc-----CCCCCcchHHH
Confidence 457799999999999999999988999999999999999999999876667788999888754 35678999999
No 416
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.87 E-value=9.6e-09 Score=105.84 Aligned_cols=82 Identities=20% Similarity=0.273 Sum_probs=65.5
Q ss_pred hhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCCce
Q 009871 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 69 ~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
+.+...++.+|||+|||+|.++..|++. ..+|+|+|+|+.|++.|+++...++ .+++|+++|+.+.--..++++++|
T Consensus 280 ~~l~~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~f 357 (433)
T 1uwv_A 280 EWLDVQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGF 357 (433)
T ss_dssp HHHTCCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCC
T ss_pred HhhcCCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCC
Confidence 3444456789999999999999999988 5689999999999999999875433 479999999986311113456789
Q ss_pred eEEEE
Q 009871 148 DIVTM 152 (523)
Q Consensus 148 D~V~~ 152 (523)
|+|++
T Consensus 358 D~Vv~ 362 (433)
T 1uwv_A 358 DKVLL 362 (433)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99999
No 417
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.87 E-value=6.7e-09 Score=96.03 Aligned_cols=71 Identities=13% Similarity=0.217 Sum_probs=61.9
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
..+.+|||||||+|.++.+++ ++.+|+|+|+|+.|++.++++....+.+..+.++|.... + ++++||+|++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~----~-~~~~~DvvLl 174 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCA----P-PAEAGDLALI 174 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTS----C-CCCBCSEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccC----C-CCCCcchHHH
Confidence 568899999999999998887 678999999999999999998766668889999999865 3 3458999988
No 418
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.86 E-value=4.4e-09 Score=102.03 Aligned_cols=133 Identities=13% Similarity=0.068 Sum_probs=86.9
Q ss_pred CCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
++++|||||||+|.++..+++.. ..+|+++|+++.+++.+++++..++......++.+...|..+ .+ ....++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~-----~l-~~~~~~ 151 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK-----FL-ENVTNT 151 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH-----HH-HHCCSC
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHH-----HH-HhCCCC
Confidence 56899999999998888888764 569999999999999999987653211112456665544321 11 112568
Q ss_pred ccEEEEcc--ccCCCCCh--HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCCh---hHHHHHHHHcCCEEEEE
Q 009871 414 FEVILGTD--VSYIPEAI--LPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDE---PSMLSAATQCGFRLVDK 483 (523)
Q Consensus 414 fD~Ii~~d--~~y~~~~~--~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~---~~~~~~~~~~gf~~~~~ 483 (523)
||+|++.- .......+ ..+++.+.++| +|+|.+++......... ..+.+.+++. |.....
T Consensus 152 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L---------~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 218 (283)
T 2i7c_A 152 YDVIIVDSSDPIGPAETLFNQNFYEKIYNAL---------KPNGYCVAQCESLWIHVGTIKNMIGYAKKL-FKKVEY 218 (283)
T ss_dssp EEEEEEECCCTTTGGGGGSSHHHHHHHHHHE---------EEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEEEE
T ss_pred ceEEEEcCCCCCCcchhhhHHHHHHHHHHhc---------CCCcEEEEECCCcccCHHHHHHHHHHHHHH-CCceEE
Confidence 99999832 11111122 68999999999 67999988754433333 2344555554 554444
No 419
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.86 E-value=1.9e-08 Score=101.43 Aligned_cols=72 Identities=22% Similarity=0.183 Sum_probs=54.2
Q ss_pred hHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeee
Q 009871 319 SAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 396 (523)
Q Consensus 319 ~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ld 396 (523)
.+..+..++.+.... .+.+|||||||+|.++..+|. ++.+|+++|+++.+++.|++|+..|++. ++.+...|
T Consensus 198 ~~~~l~~~~~~~~~~-~~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~n~~~ng~~----~v~~~~~d 269 (369)
T 3bt7_A 198 MNIQMLEWALDVTKG-SKGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQYNIAANHID----NVQIIRMA 269 (369)
T ss_dssp HHHHHHHHHHHHTTT-CCSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHHHHHHTTCC----SEEEECCC
T ss_pred HHHHHHHHHHHHhhc-CCCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEECC
Confidence 334555555544332 367899999999988887766 4678999999999999999999999873 45665443
No 420
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.86 E-value=7.6e-09 Score=103.76 Aligned_cols=122 Identities=11% Similarity=0.072 Sum_probs=92.0
Q ss_pred CCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
.++.+|||||||+|.++..+++.. ..+|+++|+ +.+++.+++. ..+.+...|..+. + +
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~--------~-p- 245 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----------NNLTYVGGDMFTS--------I-P- 245 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----------TTEEEEECCTTTC--------C-C-
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----------CCcEEEeccccCC--------C-C-
Confidence 356799999999998888888774 458999999 9998877531 2367766655431 1 2
Q ss_pred CccEEEEccccCCCCChH--HHHHHHHHHhhccCCCCCCCC---CcEEEEEEeecCC-----------------------
Q 009871 413 GFEVILGTDVSYIPEAIL--PLFATAKELTASSNKSLREDQ---QPAFILCHIFRQV----------------------- 464 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~~~~--~l~~~l~~ll~~~~~~~~~~~---~g~~~l~~~~r~~----------------------- 464 (523)
.||+|+++.++++..... .+++.+.++| +| ||.++++......
T Consensus 246 ~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L---------~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g 316 (352)
T 1fp2_A 246 NADAVLLKYILHNWTDKDCLRILKKCKEAV---------TNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNG 316 (352)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHH---------SGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTC
T ss_pred CccEEEeehhhccCCHHHHHHHHHHHHHhC---------CCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccC
Confidence 499999999999877666 9999999999 67 9998887644221
Q ss_pred ---ChhHHHHHHHHcCCEEEEEcC
Q 009871 465 ---DEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 465 ---~~~~~~~~~~~~gf~~~~~~~ 485 (523)
+..++.+.++++||+..+++.
T Consensus 317 ~~~t~~e~~~ll~~aGf~~~~~~~ 340 (352)
T 1fp2_A 317 KERNEEEWKKLFIEAGFQHYKISP 340 (352)
T ss_dssp CCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCHHHHHHHHHHCCCCeeEEEe
Confidence 124566778889999888765
No 421
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.86 E-value=1e-09 Score=101.51 Aligned_cols=75 Identities=21% Similarity=0.074 Sum_probs=60.7
Q ss_pred CCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCceeEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
.++.+|||||||+|..+..+++..+ +.+|+|+|+|+.|++.|+++.... ..+++++++|+.+. + +..++ ||+|
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--~~~~~-fD~v 130 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI-A--AGQRD-IDIL 130 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH-H--TTCCS-EEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH-h--ccCCC-CCEE
Confidence 3567999999999999999999876 789999999999999999876432 24699999998642 1 22245 9999
Q ss_pred EE
Q 009871 151 TM 152 (523)
Q Consensus 151 ~~ 152 (523)
++
T Consensus 131 ~~ 132 (210)
T 3c3p_A 131 FM 132 (210)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 422
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.86 E-value=4.4e-09 Score=104.15 Aligned_cols=111 Identities=14% Similarity=0.081 Sum_probs=78.5
Q ss_pred CCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhc--CCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTAN--LKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n--~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
..++|||||||+|.++..+++.. ..+|+++|+|+.+++.+++|+... +.. ..++.+...|+.+. +..+..
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~--~~rv~~~~~D~~~~-----l~~~~~ 192 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE--DPRVNLVIGDGVAF-----LKNAAE 192 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG--STTEEEEESCHHHH-----HHTSCT
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC--CCcEEEEECCHHHH-----HHhccC
Confidence 56799999999998888888774 469999999999999999998652 221 24677766554321 112234
Q ss_pred CCccEEEEccc--cCCCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 412 EGFEVILGTDV--SYIPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 412 ~~fD~Ii~~d~--~y~~~~--~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
++||+|++.-. ...... ...+++.+.++| +|||.+++....
T Consensus 193 ~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~L---------kpgG~lv~~~~~ 237 (334)
T 1xj5_A 193 GSYDAVIVDSSDPIGPAKELFEKPFFQSVARAL---------RPGGVVCTQAES 237 (334)
T ss_dssp TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHE---------EEEEEEEEECCC
T ss_pred CCccEEEECCCCccCcchhhhHHHHHHHHHHhc---------CCCcEEEEecCC
Confidence 68999998422 211121 478999999999 679999886433
No 423
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.86 E-value=7.7e-10 Score=98.51 Aligned_cols=76 Identities=13% Similarity=0.039 Sum_probs=59.2
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
++.+|||+|||+|.++..+++.++. |+|+|+|+.|++.|+++......+++++++|+.+.....+..+++||+|++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~ 116 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEE
Confidence 6789999999999999999998654 999999999999999976543337899999987520000011348999998
No 424
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.86 E-value=8.9e-09 Score=104.09 Aligned_cols=123 Identities=7% Similarity=-0.020 Sum_probs=92.2
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcCC-CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
..++.+|||||||+|.++..++..++ .+++++|+ +.+++.+++. .++.+...|..+. + +
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~--------~-~ 266 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL----------SGIEHVGGDMFAS--------V-P 266 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTC--------C-C
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc----------CCCEEEeCCcccC--------C-C
Confidence 44678999999999998888888764 48999999 9888776531 3477776665431 1 2
Q ss_pred CCccEEEEccccCCCCChH--HHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC--------------------------
Q 009871 412 EGFEVILGTDVSYIPEAIL--PLFATAKELTASSNKSLREDQQPAFILCHIFRQ-------------------------- 463 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~~~~~--~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-------------------------- 463 (523)
.||+|+++.++++..... .+++.+.++| +|||.++++.....
T Consensus 267 -~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L---------~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 336 (372)
T 1fp1_D 267 -QGDAMILKAVCHNWSDEKCIEFLSNCHKAL---------SPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGR 336 (372)
T ss_dssp -CEEEEEEESSGGGSCHHHHHHHHHHHHHHE---------EEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCC
T ss_pred -CCCEEEEecccccCCHHHHHHHHHHHHHhc---------CCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCc
Confidence 399999999999877666 9999999999 67999988743311
Q ss_pred -CChhHHHHHHHHcCCEEEEEcC
Q 009871 464 -VDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 464 -~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
.+..++.+.++++||++.+++.
T Consensus 337 ~~t~~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 337 ERTEKQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp CEEHHHHHHHHHHTTCSEEEEEE
T ss_pred cCCHHHHHHHHHHCCCceEEEEE
Confidence 1223556677889999888766
No 425
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.85 E-value=1e-09 Score=104.39 Aligned_cols=77 Identities=17% Similarity=0.234 Sum_probs=62.3
Q ss_pred CCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCC-----CCC
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQI-----SPS 145 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~-----~~~ 145 (523)
.++.+|||||||+|..+..+++..| +.+|+++|+|+.|++.|+++....+ .+++++++|+.+. ++ .+ +++
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~-l~-~l~~~~~~~~ 155 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPV-LD-EMIKDEKNHG 155 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHH-HH-HHHHSGGGTT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH-HH-HHHhccCCCC
Confidence 4678999999999999999999876 7899999999999999999764332 4799999998642 11 11 257
Q ss_pred ceeEEEE
Q 009871 146 SIDIVTM 152 (523)
Q Consensus 146 ~fD~V~~ 152 (523)
+||+|++
T Consensus 156 ~fD~V~~ 162 (247)
T 1sui_A 156 SYDFIFV 162 (247)
T ss_dssp CBSEEEE
T ss_pred CEEEEEE
Confidence 8999987
No 426
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.84 E-value=1.3e-08 Score=99.25 Aligned_cols=130 Identities=13% Similarity=0.081 Sum_probs=86.1
Q ss_pred CCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHHh--cCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 335 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTA--NLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~~--n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
.+++|||||||+|.++..+++. +..+|+++|+|+.+++.+++|+.. ++.. ..++.+...|..+. + ....
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~--~~~v~~~~~D~~~~-----l-~~~~ 161 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFD--DPRAEIVIANGAEY-----V-RKFK 161 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGG--CTTEEEEESCHHHH-----G-GGCS
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccC--CCceEEEECcHHHH-----H-hhCC
Confidence 4579999999999988888887 457999999999999999999754 2221 24566665443211 1 1124
Q ss_pred CCccEEEEccccCC-CC-----ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCCh---hHHHHHHHHcCCEEEE
Q 009871 412 EGFEVILGTDVSYI-PE-----AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDE---PSMLSAATQCGFRLVD 482 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~-~~-----~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~---~~~~~~~~~~gf~~~~ 482 (523)
++||+|++. +... .. ....+++.+.++| +|||.+++......... ..+.+.+++. |....
T Consensus 162 ~~fD~Ii~d-~~~~~~~~~~~l~~~~~l~~~~~~L---------kpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~ 230 (296)
T 1inl_A 162 NEFDVIIID-STDPTAGQGGHLFTEEFYQACYDAL---------KEDGVFSAETEDPFYDIGWFKLAYRRISKV-FPITR 230 (296)
T ss_dssp SCEEEEEEE-C----------CCSHHHHHHHHHHE---------EEEEEEEEECCCTTTTHHHHHHHHHHHHHH-CSEEE
T ss_pred CCceEEEEc-CCCcccCchhhhhHHHHHHHHHHhc---------CCCcEEEEEccCcccCHHHHHHHHHHHHHH-CCceE
Confidence 689999973 3221 11 2378899999999 67999988644322222 3455666666 44333
Q ss_pred E
Q 009871 483 K 483 (523)
Q Consensus 483 ~ 483 (523)
.
T Consensus 231 ~ 231 (296)
T 1inl_A 231 V 231 (296)
T ss_dssp E
T ss_pred E
Confidence 3
No 427
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.84 E-value=5.5e-09 Score=102.12 Aligned_cols=78 Identities=22% Similarity=0.266 Sum_probs=59.4
Q ss_pred HhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCCC
Q 009871 67 WGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPS 145 (523)
Q Consensus 67 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~ 145 (523)
+.+.+...++.+|||||||+|.++..|++. +.+|+|+|+|+.|++.|+++.... ..+++++++|+.+. ++ .
T Consensus 34 i~~~~~~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~----~~--~ 105 (299)
T 2h1r_A 34 IIYAAKIKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKT----VF--P 105 (299)
T ss_dssp HHHHHCCCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSS----CC--C
T ss_pred HHHhcCCCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhC----Cc--c
Confidence 334455567889999999999999999987 567999999999999999876422 25799999999865 22 3
Q ss_pred ceeEEEE
Q 009871 146 SIDIVTM 152 (523)
Q Consensus 146 ~fD~V~~ 152 (523)
+||+|++
T Consensus 106 ~~D~Vv~ 112 (299)
T 2h1r_A 106 KFDVCTA 112 (299)
T ss_dssp CCSEEEE
T ss_pred cCCEEEE
Confidence 7999987
No 428
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.84 E-value=3.3e-09 Score=102.92 Aligned_cols=71 Identities=20% Similarity=0.345 Sum_probs=60.9
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCce---eE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSI---DI 149 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~f---D~ 149 (523)
++.+|||+|||+|.++..+++. |+++|+|+|+|+.|++.|+++....+ .+++++++|+.+. ++ ++| |+
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-----~~-~~f~~~D~ 195 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-----FK-EKFASIEM 195 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-----GG-GGTTTCCE
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-----cc-cccCCCCE
Confidence 5679999999999999999999 88999999999999999999875433 3599999999752 22 478 99
Q ss_pred EEE
Q 009871 150 VTM 152 (523)
Q Consensus 150 V~~ 152 (523)
|++
T Consensus 196 Ivs 198 (284)
T 1nv8_A 196 ILS 198 (284)
T ss_dssp EEE
T ss_pred EEE
Confidence 999
No 429
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.83 E-value=2e-09 Score=107.21 Aligned_cols=67 Identities=24% Similarity=0.344 Sum_probs=54.6
Q ss_pred CCCCeEEEECCC------ccccHHHHHhh-CCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCC---
Q 009871 74 AGRKDVLEVGCG------AGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQIS--- 143 (523)
Q Consensus 74 ~~~~~iLDiGcG------~G~~~~~l~~~-~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~--- 143 (523)
.++.+||||||| +|..+..+++. +|+++|+|||+|+.|. . ...+++++++|+.++ ++.
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~----~----~~~rI~fv~GDa~dl----pf~~~l 282 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH----V----DELRIRTIQGDQNDA----EFLDRI 282 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG----G----CBTTEEEEECCTTCH----HHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh----h----cCCCcEEEEeccccc----chhhhh
Confidence 357899999999 77777777766 6889999999999983 1 236799999999876 444
Q ss_pred ---CCceeEEEE
Q 009871 144 ---PSSIDIVTM 152 (523)
Q Consensus 144 ---~~~fD~V~~ 152 (523)
+++||+|++
T Consensus 283 ~~~d~sFDlVis 294 (419)
T 3sso_A 283 ARRYGPFDIVID 294 (419)
T ss_dssp HHHHCCEEEEEE
T ss_pred hcccCCccEEEE
Confidence 689999988
No 430
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.83 E-value=2.2e-08 Score=103.92 Aligned_cols=139 Identities=15% Similarity=0.112 Sum_probs=91.7
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcC--CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEee
Q 009871 318 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS--ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRL 395 (523)
Q Consensus 318 ~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~--~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~l 395 (523)
.++.+++..+... ..++.+|||+|||+|+.+..+|+.. ...|+++|+++.+++.+++|++.+++. ++.+...
T Consensus 102 ~~s~l~~~~L~~~--~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~----nv~~~~~ 175 (479)
T 2frx_A 102 ASSMLPVAALFAD--GNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS----NVALTHF 175 (479)
T ss_dssp HHHHHHHHHHTTT--TCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC----SEEEECC
T ss_pred HHHHHHHHHhCcc--cCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----cEEEEeC
Confidence 4455556666322 1267899999999999999888863 368999999999999999999998763 3555544
Q ss_pred ecCCCCcchhhhhhcCCCccEEEEccc------cC-CCCC---------------hHHHHHHHHHHhhccCCCCCCCCCc
Q 009871 396 EWGNRDHIEAIKEENNEGFEVILGTDV------SY-IPEA---------------ILPLFATAKELTASSNKSLREDQQP 453 (523)
Q Consensus 396 dw~~~~~~~~~~~~~~~~fD~Ii~~d~------~y-~~~~---------------~~~l~~~l~~ll~~~~~~~~~~~~g 453 (523)
|..+ + ....+++||+|++... +. +++. ...+++.+.++| +|||
T Consensus 176 D~~~---~---~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~L---------kpGG 240 (479)
T 2frx_A 176 DGRV---F---GAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHAL---------RPGG 240 (479)
T ss_dssp CSTT---H---HHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHE---------EEEE
T ss_pred CHHH---h---hhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhc---------CCCC
Confidence 4322 1 1113468999997321 11 1111 246788888899 6799
Q ss_pred EEEEEEeecCCC--hhHHHHHHHHcC
Q 009871 454 AFILCHIFRQVD--EPSMLSAATQCG 477 (523)
Q Consensus 454 ~~~l~~~~r~~~--~~~~~~~~~~~g 477 (523)
.++++...-... +..+...+++++
T Consensus 241 ~LvysTcs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 241 TLVYSTCTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp EEEEEESCCSSTTTHHHHHHHHHHST
T ss_pred EEEEecccCCcccCHHHHHHHHHHCC
Confidence 998876543322 223344455664
No 431
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.83 E-value=7.9e-09 Score=92.18 Aligned_cols=113 Identities=15% Similarity=0.205 Sum_probs=75.1
Q ss_pred CCCCeEEEECCCccccHHHHHhh-CCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCc----cCCCCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAA-YPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDD----LSRQISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~----~~~~~~~~~fD 148 (523)
.++.+|||+|||+|..+..+++. .++.+|+|+|+|+ |++. .++++.++|+.+.+ ++..+++++||
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D 90 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------VGVDFLQGDFRDELVMKALLERVGDSKVQ 90 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------TTEEEEESCTTSHHHHHHHHHHHTTCCEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------CcEEEEEcccccchhhhhhhccCCCCcee
Confidence 56789999999999999999998 5678999999999 7532 46899999998652 00005678999
Q ss_pred EEEEcc---cccc------------ceeeec-ceEEecCCeEEEe-e---CHHHHHHHHHhCCCcEEEE
Q 009871 149 IVTMER---LTGK------------DQKISE-NFYVRGDGTRAFY-F---SNDFLTSLFKENGFDVEEL 197 (523)
Q Consensus 149 ~V~~~~---~~~~------------~~~~~~-~~~~~~~g~~~~~-~---~~~~l~~ll~~~Gf~~~~~ 197 (523)
+|++.. .... ...+.. .-.++++|.++.. + ...++...+... |..+.+
T Consensus 91 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~ 158 (180)
T 1ej0_A 91 VVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSL-FTKVKV 158 (180)
T ss_dssp EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHH-EEEEEE
T ss_pred EEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHh-hhhEEe
Confidence 999911 1000 000100 1257788877653 2 455667777663 655443
No 432
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.83 E-value=7e-09 Score=99.77 Aligned_cols=108 Identities=13% Similarity=0.051 Sum_probs=77.3
Q ss_pred HHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCC
Q 009871 322 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNR 400 (523)
Q Consensus 322 ~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~ 400 (523)
.+.+++..... .++.+|||+|||+|.++..++... ..+|+++|+++.+++.++++. .++.+...|+.+.
T Consensus 73 ~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~ 142 (269)
T 1p91_A 73 AIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------PQVTFCVASSHRL 142 (269)
T ss_dssp HHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTSC
T ss_pred HHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcchhhC
Confidence 34455543221 367899999999998888888773 568999999999999998763 2345555554432
Q ss_pred CcchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec
Q 009871 401 DHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFR 462 (523)
Q Consensus 401 ~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r 462 (523)
++.+++||+|++..+ ...++.+.++| +|||.+++.....
T Consensus 143 -------~~~~~~fD~v~~~~~-------~~~l~~~~~~L---------~pgG~l~~~~~~~ 181 (269)
T 1p91_A 143 -------PFSDTSMDAIIRIYA-------PCKAEELARVV---------KPGGWVITATPGP 181 (269)
T ss_dssp -------SBCTTCEEEEEEESC-------CCCHHHHHHHE---------EEEEEEEEEEECT
T ss_pred -------CCCCCceeEEEEeCC-------hhhHHHHHHhc---------CCCcEEEEEEcCH
Confidence 234568999998754 23578899999 6799998877653
No 433
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.82 E-value=3.2e-08 Score=95.87 Aligned_cols=130 Identities=18% Similarity=0.092 Sum_probs=84.5
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCC-------CCCceEEEeeecCCCCcchhhh
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPP-------FLAKLITKRLEWGNRDHIEAIK 407 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~-------~~~~v~~~~ldw~~~~~~~~~~ 407 (523)
.+++|||||||+|.++..+++.+..+|+++|+|+.+++.+++|+ ...... ...++.+...|.. .-+.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~-----~~l~ 148 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGF-----EFIK 148 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHH-----HHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchH-----HHhc
Confidence 56799999999998888888876669999999999999999988 321000 1245666543321 1111
Q ss_pred hhcCCCccEEEEccccCCC---CC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCCh---hHHHHHHHHcCCE
Q 009871 408 EENNEGFEVILGTDVSYIP---EA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDE---PSMLSAATQCGFR 479 (523)
Q Consensus 408 ~~~~~~fD~Ii~~d~~y~~---~~--~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~---~~~~~~~~~~gf~ 479 (523)
. .++||+|++. ..... .. ...+++.+.++| +|||.+++......... ..+.+.+++. |.
T Consensus 149 ~--~~~fD~Ii~d-~~~~~~~~~~l~~~~~l~~~~~~L---------~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-f~ 215 (281)
T 1mjf_A 149 N--NRGFDVIIAD-STDPVGPAKVLFSEEFYRYVYDAL---------NNPGIYVTQAGSVYLFTDELISAYKEMKKV-FD 215 (281)
T ss_dssp H--CCCEEEEEEE-CCCCC-----TTSHHHHHHHHHHE---------EEEEEEEEEEEETTTSHHHHHHHHHHHHHH-CS
T ss_pred c--cCCeeEEEEC-CCCCCCcchhhhHHHHHHHHHHhc---------CCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CC
Confidence 1 5689999984 33221 12 377899999999 67999988654322222 2344455554 54
Q ss_pred EEEE
Q 009871 480 LVDK 483 (523)
Q Consensus 480 ~~~~ 483 (523)
....
T Consensus 216 ~v~~ 219 (281)
T 1mjf_A 216 RVYY 219 (281)
T ss_dssp EEEE
T ss_pred ceEE
Confidence 4444
No 434
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.82 E-value=7.6e-09 Score=104.60 Aligned_cols=74 Identities=18% Similarity=0.168 Sum_probs=61.8
Q ss_pred cCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCceeE
Q 009871 72 SGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDI 149 (523)
Q Consensus 72 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~ 149 (523)
...++.+|||||||+|.++..+++.+ ..+|+|+|+| .|++.|+++.... ..+++++++|+.+. +++ ++||+
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~-~~~D~ 132 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDI----SLP-EKVDV 132 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGC----CCS-SCEEE
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhc----CcC-CcceE
Confidence 34578899999999999999999884 2389999999 9999999876543 25699999999877 344 78999
Q ss_pred EEE
Q 009871 150 VTM 152 (523)
Q Consensus 150 V~~ 152 (523)
|++
T Consensus 133 Iv~ 135 (376)
T 3r0q_C 133 IIS 135 (376)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 435
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.82 E-value=2.3e-08 Score=100.58 Aligned_cols=130 Identities=15% Similarity=0.057 Sum_probs=94.8
Q ss_pred HHhcCCCCCCCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcch
Q 009871 326 VLARNPTIVAGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIE 404 (523)
Q Consensus 326 ~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~ 404 (523)
++...+...++.+|||||||+|.++..+++.. ..+++++|+ +.+++.++. ..++.+...|..+.
T Consensus 192 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~D~~~~---- 256 (364)
T 3p9c_A 192 LLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----------FPGVTHVGGDMFKE---- 256 (364)
T ss_dssp HHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTC----
T ss_pred HHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----------cCCeEEEeCCcCCC----
Confidence 33333334467899999999999888888875 348999999 888876653 14678877776542
Q ss_pred hhhhhcCCCccEEEEccccCCC--CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-------------------
Q 009871 405 AIKEENNEGFEVILGTDVSYIP--EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ------------------- 463 (523)
Q Consensus 405 ~~~~~~~~~fD~Ii~~d~~y~~--~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~------------------- 463 (523)
++. . |+|++..++++. +....+++.+.+.| +|||.+++......
T Consensus 257 ----~p~-~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L---------~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m 321 (364)
T 3p9c_A 257 ----VPS-G-DTILMKWILHDWSDQHCATLLKNCYDAL---------PAHGKVVLVQCILPVNPEANPSSQGVFHVDMIM 321 (364)
T ss_dssp ----CCC-C-SEEEEESCGGGSCHHHHHHHHHHHHHHS---------CTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHH
T ss_pred ----CCC-C-CEEEehHHhccCCHHHHHHHHHHHHHHc---------CCCCEEEEEEeccCCCCCcchhhhhHHHhHHHH
Confidence 222 3 999999999865 44668999999999 77999988654321
Q ss_pred ---------CChhHHHHHHHHcCCEEEEEcC
Q 009871 464 ---------VDEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 464 ---------~~~~~~~~~~~~~gf~~~~~~~ 485 (523)
.+..++.+.++++||+..++..
T Consensus 322 ~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~ 352 (364)
T 3p9c_A 322 LAHNPGGRERYEREFQALARGAGFTGVKSTY 352 (364)
T ss_dssp HHHCSSCCCCBHHHHHHHHHHTTCCEEEEEE
T ss_pred HhcccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 1134566778899999988876
No 436
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.82 E-value=1.5e-08 Score=93.77 Aligned_cols=103 Identities=13% Similarity=0.043 Sum_probs=71.1
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCc
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGF 414 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~f 414 (523)
+..+|||||||+|.++..+. +..+|+++|+|+.+++.+++++..++.. ..+...|.... .++++|
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~-----~~~~v~D~~~~--------~~~~~~ 169 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWD-----FTFALQDVLCA--------PPAEAG 169 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCE-----EEEEECCTTTS--------CCCCBC
T ss_pred CCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCC-----ceEEEeecccC--------CCCCCc
Confidence 56799999999997766655 6779999999999999999999987643 34444443322 235699
Q ss_pred cEEEEccccCCCC--ChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC
Q 009871 415 EVILGTDVSYIPE--AILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ 463 (523)
Q Consensus 415 D~Ii~~d~~y~~~--~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~ 463 (523)
|+|++..++.+-+ .-..+++.+ +.| + .+.++++.+.|.
T Consensus 170 DvvLllk~lh~LE~q~~~~~~~ll-~aL---------~-~~~vvVsfPtks 209 (253)
T 3frh_A 170 DLALIFKLLPLLEREQAGSAMALL-QSL---------N-TPRMAVSFPTRS 209 (253)
T ss_dssp SEEEEESCHHHHHHHSTTHHHHHH-HHC---------B-CSEEEEEEECC-
T ss_pred chHHHHHHHHHhhhhchhhHHHHH-HHh---------c-CCCEEEEcChHH
Confidence 9999998776622 222344333 355 2 346667777554
No 437
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.82 E-value=6.2e-09 Score=104.22 Aligned_cols=71 Identities=25% Similarity=0.256 Sum_probs=58.3
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
++++|||||||+|.++..+++.+ ..+|+|||.|+ |++.|++....+ ..+++++++|++++++ + ++||+|++
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l----p-e~~Dvivs 155 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL----P-EQVDAIVS 155 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC----S-SCEEEEEC
T ss_pred CCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC----C-ccccEEEe
Confidence 57899999999999998777764 35799999996 889998876443 3679999999998743 3 57999999
No 438
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.82 E-value=3e-10 Score=107.69 Aligned_cols=77 Identities=19% Similarity=0.267 Sum_probs=62.2
Q ss_pred CCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCC----CCCc
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQI----SPSS 146 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~----~~~~ 146 (523)
.++.+|||||||+|..+..+++..+ +++|+|+|+|+.|++.|+++.... ..+++++++|+.+. ++ .+ .+++
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~-l~-~~~~~~~~~~ 136 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDT-LH-SLLNEGGEHQ 136 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHH-HH-HHHHHHCSSC
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH-HH-HHhhccCCCC
Confidence 4578999999999999999999865 789999999999999999876433 25799999998653 11 01 1478
Q ss_pred eeEEEE
Q 009871 147 IDIVTM 152 (523)
Q Consensus 147 fD~V~~ 152 (523)
||+|++
T Consensus 137 fD~V~~ 142 (242)
T 3r3h_A 137 FDFIFI 142 (242)
T ss_dssp EEEEEE
T ss_pred EeEEEE
Confidence 999988
No 439
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.80 E-value=8.6e-09 Score=98.76 Aligned_cols=89 Identities=17% Similarity=0.067 Sum_probs=66.3
Q ss_pred ccccchhhhHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeecc
Q 009871 55 RFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLI 134 (523)
Q Consensus 55 ~f~~~~~~l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~ 134 (523)
+|..+...+ ..+-+.+...++ +|||||||+|.++..|++.. .+|+|+|+++.|++.++++.. ..+++++++|+.
T Consensus 28 nfL~d~~i~-~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~--~~~v~vi~~D~l 101 (271)
T 3fut_A 28 NFLVSEAHL-RRIVEAARPFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLS--GLPVRLVFQDAL 101 (271)
T ss_dssp CEECCHHHH-HHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTT--TSSEEEEESCGG
T ss_pred cccCCHHHH-HHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcC--CCCEEEEECChh
Confidence 344444443 333344444567 99999999999999999984 569999999999999998764 257999999999
Q ss_pred CCccCCCCCCCceeEEEE
Q 009871 135 SDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 135 ~~~~~~~~~~~~fD~V~~ 152 (523)
+.+++. ...+|.|++
T Consensus 102 ~~~~~~---~~~~~~iv~ 116 (271)
T 3fut_A 102 LYPWEE---VPQGSLLVA 116 (271)
T ss_dssp GSCGGG---SCTTEEEEE
T ss_pred hCChhh---ccCccEEEe
Confidence 874432 125788866
No 440
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.80 E-value=3.6e-09 Score=99.12 Aligned_cols=75 Identities=12% Similarity=0.120 Sum_probs=60.7
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCC------CCEEEEEeCCHHHHHHHHhccccC------CCcEEEEEeeccCCccCC
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYP------DVFVYACDFSPRAVNLVMTHKDFT------ETRVSTFVCDLISDDLSR 140 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~------~~~v~gvD~S~~~l~~a~~~~~~~------~~~v~~~~~d~~~~~~~~ 140 (523)
..++.+|||||||+|..+..+++..+ ..+|+|+|+|+.+++.|+++.... ..++++.++|+...
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---- 157 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG---- 157 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC----
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccC----
Confidence 35678999999999999999988643 258999999999999999876432 35799999999752
Q ss_pred CCCC-CceeEEEE
Q 009871 141 QISP-SSIDIVTM 152 (523)
Q Consensus 141 ~~~~-~~fD~V~~ 152 (523)
+++ ++||+|++
T Consensus 158 -~~~~~~fD~I~~ 169 (227)
T 1r18_A 158 -YPPNAPYNAIHV 169 (227)
T ss_dssp -CGGGCSEEEEEE
T ss_pred -CCcCCCccEEEE
Confidence 233 78999988
No 441
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.80 E-value=1.8e-08 Score=100.69 Aligned_cols=75 Identities=21% Similarity=0.252 Sum_probs=60.7
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCcee
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ |++.|+++....+ .+++++++|+.+. +++ ++||
T Consensus 46 l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~----~~~-~~~D 118 (348)
T 2y1w_A 46 HTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV----SLP-EQVD 118 (348)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC----CCS-SCEE
T ss_pred cccCCcCEEEEcCCCccHHHHHHHhCC-CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhC----CCC-Ccee
Confidence 333578899999999999999988863 46899999996 8899988764332 6799999999876 333 5799
Q ss_pred EEEE
Q 009871 149 IVTM 152 (523)
Q Consensus 149 ~V~~ 152 (523)
+|++
T Consensus 119 ~Ivs 122 (348)
T 2y1w_A 119 IIIS 122 (348)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9999
No 442
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.80 E-value=2.1e-08 Score=100.96 Aligned_cols=102 Identities=19% Similarity=0.090 Sum_probs=76.4
Q ss_pred CCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHHhc---------------CCCCCCCceEEEeeecC
Q 009871 335 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTAN---------------LKPPFLAKLITKRLEWG 398 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~~n---------------~~~~~~~~v~~~~ldw~ 398 (523)
++.+|||+|||+|.+++.+++. ++.+|+++|+++.+++.+++|++.| ++. .+.+...|..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~----~i~v~~~Da~ 122 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK----TIVINHDDAN 122 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS----EEEEEESCHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC----ceEEEcCcHH
Confidence 5789999999999999998887 5668999999999999999999999 542 2555444332
Q ss_pred CCCcchhhhhhcCCCccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEE
Q 009871 399 NRDHIEAIKEENNEGFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCH 459 (523)
Q Consensus 399 ~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~ 459 (523)
+ +.......||+|+. |..+ ....+++.+.++| +++|.++++.
T Consensus 123 ~------~~~~~~~~fD~I~l-DP~~---~~~~~l~~a~~~l---------k~gG~l~vt~ 164 (378)
T 2dul_A 123 R------LMAERHRYFHFIDL-DPFG---SPMEFLDTALRSA---------KRRGILGVTA 164 (378)
T ss_dssp H------HHHHSTTCEEEEEE-CCSS---CCHHHHHHHHHHE---------EEEEEEEEEE
T ss_pred H------HHHhccCCCCEEEe-CCCC---CHHHHHHHHHHhc---------CCCCEEEEEe
Confidence 1 11111357999995 6533 2467888888899 5688887764
No 443
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.80 E-value=5.3e-08 Score=94.90 Aligned_cols=128 Identities=12% Similarity=0.038 Sum_probs=85.1
Q ss_pred CeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCcc
Q 009871 337 KKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFE 415 (523)
Q Consensus 337 ~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD 415 (523)
.+|||||||+|.++..+++. ...+|+++|+|+.+++.+++++..+. ..++++...|..+ -+..+..++||
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~----~~rv~v~~~Da~~-----~l~~~~~~~fD 161 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR----APRVKIRVDDARM-----VAESFTPASRD 161 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC----TTTEEEEESCHHH-----HHHTCCTTCEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC----CCceEEEECcHHH-----HHhhccCCCCC
Confidence 49999999999999888884 34589999999999999999875432 2466665443221 11223356899
Q ss_pred EEEEccccC---CCCC--hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCC--hhHHHHHHHHcCCEEEEEc
Q 009871 416 VILGTDVSY---IPEA--ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVD--EPSMLSAATQCGFRLVDKW 484 (523)
Q Consensus 416 ~Ii~~d~~y---~~~~--~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~--~~~~~~~~~~~gf~~~~~~ 484 (523)
+|++. +.. .... ...+++.++++| +|+|.+++........ ...+...+++. |....++
T Consensus 162 vIi~D-~~~~~~~~~~L~t~efl~~~~r~L---------kpgGvlv~~~~~~~~~~~~~~~~~tL~~v-F~~v~~~ 226 (317)
T 3gjy_A 162 VIIRD-VFAGAITPQNFTTVEFFEHCHRGL---------APGGLYVANCGDHSDLRGAKSELAGMMEV-FEHVAVI 226 (317)
T ss_dssp EEEEC-CSTTSCCCGGGSBHHHHHHHHHHE---------EEEEEEEEEEEECTTCHHHHHHHHHHHHH-CSEEEEE
T ss_pred EEEEC-CCCccccchhhhHHHHHHHHHHhc---------CCCcEEEEEecCCcchHHHHHHHHHHHHH-CCceEEE
Confidence 99984 321 1222 268999999999 6799988766543211 12455666555 4433433
No 444
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.79 E-value=1.9e-08 Score=95.35 Aligned_cols=88 Identities=15% Similarity=0.231 Sum_probs=64.9
Q ss_pred cccchhhhHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccC
Q 009871 56 FFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLIS 135 (523)
Q Consensus 56 f~~~~~~l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~ 135 (523)
|..+...+ ..+.+.+...++.+|||||||+|.++..+++++ .+|+|+|+|+.|++.++++... ..+++++++|+.+
T Consensus 12 fl~d~~~~-~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~-~~~v~~~~~D~~~ 87 (244)
T 1qam_A 12 FITSKHNI-DKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD-HDNFQVLNKDILQ 87 (244)
T ss_dssp BCCCHHHH-HHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT-CCSEEEECCCGGG
T ss_pred ccCCHHHH-HHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc-CCCeEEEEChHHh
Confidence 44333333 333334444678899999999999999999984 6799999999999999987643 2579999999998
Q ss_pred CccCCCCC-CCceeEEE
Q 009871 136 DDLSRQIS-PSSIDIVT 151 (523)
Q Consensus 136 ~~~~~~~~-~~~fD~V~ 151 (523)
.+ ++ ...|++|.
T Consensus 88 ~~----~~~~~~~~vv~ 100 (244)
T 1qam_A 88 FK----FPKNQSYKIFG 100 (244)
T ss_dssp CC----CCSSCCCEEEE
T ss_pred CC----cccCCCeEEEE
Confidence 73 33 24565443
No 445
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.79 E-value=8.6e-09 Score=102.52 Aligned_cols=113 Identities=19% Similarity=0.264 Sum_probs=79.2
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
.++.+|||+|||+|.++.. ++. ..+|+|+|+|+.|++.|+++...++ .+++++++|+.+. . ++||+|+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~--~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~----~---~~fD~Vi 263 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKN--AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV----D---VKGNRVI 263 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTT--SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC----C---CCEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-ccC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh----c---CCCcEEE
Confidence 3678999999999999999 763 6789999999999999999875443 4799999999865 2 7899999
Q ss_pred Ec--cccccceeeec-ceEEecCCeEEEe-e--CHHHHHHHHHhC-CCcEEEEE
Q 009871 152 ME--RLTGKDQKISE-NFYVRGDGTRAFY-F--SNDFLTSLFKEN-GFDVEELG 198 (523)
Q Consensus 152 ~~--~~~~~~~~~~~-~~~~~~~g~~~~~-~--~~~~l~~ll~~~-Gf~~~~~~ 198 (523)
+. .+.. ..+.. .-.++++|.+.+. + ..+.+.+.+.++ |+++..+.
T Consensus 264 ~dpP~~~~--~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 315 (336)
T 2yx1_A 264 MNLPKFAH--KFIDKALDIVEEGGVIHYYTIGKDFDKAIKLFEKKCDCEVLEKR 315 (336)
T ss_dssp ECCTTTGG--GGHHHHHHHEEEEEEEEEEEEESSSHHHHHHHHHHSEEEEEEEE
T ss_pred ECCcHhHH--HHHHHHHHHcCCCCEEEEEEeecCchHHHHHHHHhcCCcEEEEE
Confidence 91 1111 10000 1145667766542 2 245666777766 66654443
No 446
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.79 E-value=4.6e-08 Score=100.69 Aligned_cols=142 Identities=16% Similarity=0.076 Sum_probs=94.3
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCC-CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeee
Q 009871 318 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLE 396 (523)
Q Consensus 318 ~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ld 396 (523)
.++.+++..+. ..++.+|||+|||+|+.+..++..+. .+|+++|+++.+++.+++|+..++.. +.+...|
T Consensus 233 ~~s~~~~~~l~----~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~-----~~~~~~D 303 (429)
T 1sqg_A 233 ASAQGCMTWLA----PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK-----ATVKQGD 303 (429)
T ss_dssp HHHHTHHHHHC----CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCC-----CEEEECC
T ss_pred HHHHHHHHHcC----CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCC-----eEEEeCc
Confidence 45555666663 24678999999999999999988754 69999999999999999999988763 3454444
Q ss_pred cCCCCcchhhhhhcCCCccEEEEcc------ccCCCCC---------h-------HHHHHHHHHHhhccCCCCCCCCCcE
Q 009871 397 WGNRDHIEAIKEENNEGFEVILGTD------VSYIPEA---------I-------LPLFATAKELTASSNKSLREDQQPA 454 (523)
Q Consensus 397 w~~~~~~~~~~~~~~~~fD~Ii~~d------~~y~~~~---------~-------~~l~~~l~~ll~~~~~~~~~~~~g~ 454 (523)
..+.. ..+..++||+|++.. ++..... + ..+++.+.++| +|||.
T Consensus 304 ~~~~~-----~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~L---------kpGG~ 369 (429)
T 1sqg_A 304 GRYPS-----QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL---------KTGGT 369 (429)
T ss_dssp TTCTH-----HHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGE---------EEEEE
T ss_pred hhhch-----hhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhc---------CCCCE
Confidence 43321 013346899999732 1211111 1 46677777888 67999
Q ss_pred EEEEEeecC--CChhHHHHHHHHc-CCEEEE
Q 009871 455 FILCHIFRQ--VDEPSMLSAATQC-GFRLVD 482 (523)
Q Consensus 455 ~~l~~~~r~--~~~~~~~~~~~~~-gf~~~~ 482 (523)
++++...-. ..+..+...++++ +|++..
T Consensus 370 lvystcs~~~~ene~~v~~~l~~~~~~~~~~ 400 (429)
T 1sqg_A 370 LVYATCSVLPEENSLQIKAFLQRTADAELCE 400 (429)
T ss_dssp EEEEESCCCGGGTHHHHHHHHHHCTTCEECS
T ss_pred EEEEECCCChhhHHHHHHHHHHhCCCCEEeC
Confidence 988764432 2233344455554 677653
No 447
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.78 E-value=6.5e-09 Score=102.94 Aligned_cols=78 Identities=19% Similarity=0.215 Sum_probs=63.7
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc-----CCCcEEEEEeeccCCccCCCCCCCce
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-----TETRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
...+.+|||||||+|..+..+++..+..+|++||+|+.|++.|+++... ...+++++++|+.+. ++ ..++++|
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~-l~-~~~~~~f 195 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAF-LK-NAAEGSY 195 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHH-HH-TSCTTCE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHH-HH-hccCCCc
Confidence 3567899999999999999999887778999999999999999997632 246899999998642 11 1245789
Q ss_pred eEEEE
Q 009871 148 DIVTM 152 (523)
Q Consensus 148 D~V~~ 152 (523)
|+|++
T Consensus 196 DlIi~ 200 (334)
T 1xj5_A 196 DAVIV 200 (334)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99998
No 448
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.78 E-value=1e-08 Score=101.66 Aligned_cols=73 Identities=19% Similarity=0.271 Sum_probs=60.7
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
.++.+|||||||+|.++..+++.+ ..+|+|+|+| .|++.|+++...+ ..+++++++|+.+. ++++++||+|+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~~~~~~~D~Iv 110 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHG-AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDV----HLPFPKVDIII 110 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTC-CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTS----CCSSSCEEEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHCC-CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhc----cCCCCcccEEE
Confidence 357899999999999999988873 3589999999 5999999876433 35799999999877 55668999999
Q ss_pred E
Q 009871 152 M 152 (523)
Q Consensus 152 ~ 152 (523)
+
T Consensus 111 s 111 (328)
T 1g6q_1 111 S 111 (328)
T ss_dssp E
T ss_pred E
Confidence 8
No 449
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.78 E-value=1e-08 Score=106.20 Aligned_cols=80 Identities=15% Similarity=0.130 Sum_probs=65.5
Q ss_pred hcCCCCCeEEEECCCccccHHHHHhhCCC-CEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCCCcee
Q 009871 71 FSGAGRKDVLEVGCGAGNTIFPLIAAYPD-VFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 71 ~~~~~~~~iLDiGcG~G~~~~~l~~~~~~-~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
+...++.+|||+|||+|..+..+++..++ .+|+|+|+|+.+++.++++.... ..++.++++|+.... ..+++++||
T Consensus 255 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~--~~~~~~~fD 332 (450)
T 2yxl_A 255 LDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAP--EIIGEEVAD 332 (450)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCS--SSSCSSCEE
T ss_pred cCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcc--hhhccCCCC
Confidence 34467789999999999999999998765 79999999999999999986543 347999999998652 114557899
Q ss_pred EEEE
Q 009871 149 IVTM 152 (523)
Q Consensus 149 ~V~~ 152 (523)
+|++
T Consensus 333 ~Vl~ 336 (450)
T 2yxl_A 333 KVLL 336 (450)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 450
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.77 E-value=3.2e-09 Score=100.31 Aligned_cols=79 Identities=22% Similarity=0.237 Sum_probs=62.2
Q ss_pred CCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCC--ccC-CCCCCCce
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISD--DLS-RQISPSSI 147 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~--~~~-~~~~~~~f 147 (523)
.++.+|||||||+|..+..+++..| +.+|+++|+|+.+++.|+++....+ .+++++++|+.+. .+. ..+++++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 4678999999999999999999866 7899999999999999998764332 4699999998642 010 00125789
Q ss_pred eEEEE
Q 009871 148 DIVTM 152 (523)
Q Consensus 148 D~V~~ 152 (523)
|+|++
T Consensus 149 D~I~~ 153 (237)
T 3c3y_A 149 DFGFV 153 (237)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 99987
No 451
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.77 E-value=1.4e-08 Score=99.68 Aligned_cols=108 Identities=18% Similarity=0.141 Sum_probs=73.7
Q ss_pred CCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHhc--CCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTAN--LKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~n--~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
..++|||||||+|.++..+++.. ..+|+++|+|+.+++.|++|+... +. ...++.+...|..+ .+ ....
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~--~~~rv~~~~~D~~~-----~l-~~~~ 179 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGF--SHPKLDLFCGDGFE-----FL-KNHK 179 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGG--GCTTEEEECSCHHH-----HH-HHCT
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhcccc--CCCCEEEEEChHHH-----HH-HhcC
Confidence 45799999999998888888774 569999999999999999987643 21 12456665443321 11 1135
Q ss_pred CCccEEEEccccCC---CCC-h-HHHHHHHHHHhhccCCCCCCCCCcEEEEEEe
Q 009871 412 EGFEVILGTDVSYI---PEA-I-LPLFATAKELTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~---~~~-~-~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
++||+|++. .... ... . ..+++.+.++| +|||.+++...
T Consensus 180 ~~fD~Ii~d-~~~~~~~~~~l~t~~~l~~~~~~L---------kpgG~lv~~~~ 223 (314)
T 2b2c_A 180 NEFDVIITD-SSDPVGPAESLFGQSYYELLRDAL---------KEDGILSSQGE 223 (314)
T ss_dssp TCEEEEEEC-CC-------------HHHHHHHHE---------EEEEEEEEECC
T ss_pred CCceEEEEc-CCCCCCcchhhhHHHHHHHHHhhc---------CCCeEEEEECC
Confidence 689999974 3211 111 2 68899999999 67999988653
No 452
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.77 E-value=1.2e-08 Score=91.36 Aligned_cols=112 Identities=14% Similarity=0.046 Sum_probs=83.7
Q ss_pred CCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 333 IVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 333 ~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
..+|.+|||||||. +.+|+++.|++.++++... .+.+...|..+... ..++++
T Consensus 10 ~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~--------~~~~~~~d~~~~~~----~~~~~~ 62 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN--------EGRVSVENIKQLLQ----SAHKES 62 (176)
T ss_dssp CCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT--------TSEEEEEEGGGGGG----GCCCSS
T ss_pred CCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc--------CcEEEEechhcCcc----ccCCCC
Confidence 45789999999996 2399999999999987532 24555555543210 012467
Q ss_pred CccEEEEccccCCC-CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC--------CChhHHHHHHHHcCCEEE
Q 009871 413 GFEVILGTDVSYIP-EAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ--------VDEPSMLSAATQCGFRLV 481 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~-~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~--------~~~~~~~~~~~~~gf~~~ 481 (523)
+||+|+++.++++. .....+++.+.++| +|||.+++.+.... .+...+.+.++++|| +.
T Consensus 63 ~fD~V~~~~~l~~~~~~~~~~l~~~~r~L---------kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 63 SFDIILSGLVPGSTTLHSAEILAEIARIL---------RPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp CEEEEEECCSTTCCCCCCHHHHHHHHHHE---------EEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred CEeEEEECChhhhcccCHHHHHHHHHHHC---------CCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cE
Confidence 89999999999887 88899999999999 67999999765321 124578889999999 55
No 453
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.76 E-value=6.6e-09 Score=105.84 Aligned_cols=84 Identities=12% Similarity=0.173 Sum_probs=62.0
Q ss_pred hhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHH-------HhccccCC---CcEEEEEeeccCCcc
Q 009871 69 RYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLV-------MTHKDFTE---TRVSTFVCDLISDDL 138 (523)
Q Consensus 69 ~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a-------~~~~~~~~---~~v~~~~~d~~~~~~ 138 (523)
+.+...++.+|||||||+|.++..+++.++..+|+|||+|+.|++.| +++....+ .+++++++|......
T Consensus 236 ~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~ 315 (433)
T 1u2z_A 236 QQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNN 315 (433)
T ss_dssp HHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCH
T ss_pred HhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccc
Confidence 34455678899999999999999999986566899999999999998 76654322 679999876542210
Q ss_pred CCCCCCCceeEEEE
Q 009871 139 SRQISPSSIDIVTM 152 (523)
Q Consensus 139 ~~~~~~~~fD~V~~ 152 (523)
+.+...++||+|++
T Consensus 316 ~~~~~~~~FDvIvv 329 (433)
T 1u2z_A 316 RVAELIPQCDVILV 329 (433)
T ss_dssp HHHHHGGGCSEEEE
T ss_pred ccccccCCCCEEEE
Confidence 00012468999998
No 454
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.76 E-value=2.5e-08 Score=100.21 Aligned_cols=121 Identities=13% Similarity=0.062 Sum_probs=90.9
Q ss_pred CCCeEEEECCCccHHHHHHHhcCC-CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSA-DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEG 413 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~-~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~ 413 (523)
++.+|||||||+|.++..+++..+ .+++++|+ +.+++.++. . ..+.+...|..+. + + .
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~----~~v~~~~~d~~~~--------~-~-~ 251 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N----ENLNFVGGDMFKS--------I-P-S 251 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C----SSEEEEECCTTTC--------C-C-C
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C----CCcEEEeCccCCC--------C-C-C
Confidence 567999999999998888888754 48999999 788876543 1 2377766665431 1 2 5
Q ss_pred ccEEEEccccCCCCChH--HHHHHHHHHhhccCCCCCCCC---CcEEEEEEeecCC------------------------
Q 009871 414 FEVILGTDVSYIPEAIL--PLFATAKELTASSNKSLREDQ---QPAFILCHIFRQV------------------------ 464 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~~~--~l~~~l~~ll~~~~~~~~~~~---~g~~~l~~~~r~~------------------------ 464 (523)
||+|+++.++++..... .+++.+.+.| +| ||.+++.......
T Consensus 252 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L---------~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g 322 (358)
T 1zg3_A 252 ADAVLLKWVLHDWNDEQSLKILKNSKEAI---------SHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLG 322 (358)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHT---------GGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSC
T ss_pred ceEEEEcccccCCCHHHHHHHHHHHHHhC---------CCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCC
Confidence 99999999999877655 9999999999 67 8988886543210
Q ss_pred ---ChhHHHHHHHHcCCEEEEEcC
Q 009871 465 ---DEPSMLSAATQCGFRLVDKWP 485 (523)
Q Consensus 465 ---~~~~~~~~~~~~gf~~~~~~~ 485 (523)
+..++.+.++++||++.+++.
T Consensus 323 ~~~t~~e~~~ll~~aGf~~~~~~~ 346 (358)
T 1zg3_A 323 KERTKQEWEKLIYDAGFSSYKITP 346 (358)
T ss_dssp CCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCHHHHHHHHHHcCCCeeEEEe
Confidence 234566777889999988876
No 455
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.76 E-value=1.7e-08 Score=97.30 Aligned_cols=82 Identities=15% Similarity=0.172 Sum_probs=62.7
Q ss_pred ccccchhhhHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCC--CEEEEEeCCHHHHHHHHhccccCCCcEEEEEee
Q 009871 55 RFFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPD--VFVYACDFSPRAVNLVMTHKDFTETRVSTFVCD 132 (523)
Q Consensus 55 ~f~~~~~~l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d 132 (523)
+|..+..++ ..+-+.+...++.+|||||||+|.++..|+++.+. .+|+|+|+|+.|++.++++. ..+++++++|
T Consensus 23 ~fL~d~~i~-~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~~~v~~i~~D 98 (279)
T 3uzu_A 23 NFLVDHGVI-DAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---GELLELHAGD 98 (279)
T ss_dssp CEECCHHHH-HHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---GGGEEEEESC
T ss_pred cccCCHHHH-HHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---CCCcEEEECC
Confidence 344444433 33444455567889999999999999999988432 45999999999999999883 4679999999
Q ss_pred ccCCccCC
Q 009871 133 LISDDLSR 140 (523)
Q Consensus 133 ~~~~~~~~ 140 (523)
+.+.+++.
T Consensus 99 ~~~~~~~~ 106 (279)
T 3uzu_A 99 ALTFDFGS 106 (279)
T ss_dssp GGGCCGGG
T ss_pred hhcCChhH
Confidence 99886543
No 456
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.76 E-value=1.6e-08 Score=101.73 Aligned_cols=112 Identities=17% Similarity=0.213 Sum_probs=80.6
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE--
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM-- 152 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~-- 152 (523)
...+|||||||+|..+..+++++|+.+++++|+ +.|++.|++. .+++++.+|+.+ +++ +||+|++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~~--~~D~v~~~~ 259 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN-----ENLNFVGGDMFK-----SIP--SADAVLLKW 259 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC-----SSEEEEECCTTT-----CCC--CCSEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC-----CCcEEEeCccCC-----CCC--CceEEEEcc
Confidence 568999999999999999999999999999999 7998777652 459999999974 233 4999999
Q ss_pred -----------------cccccc---ceeeecceEEec-CCeE-------------------EEeeCHHHHHHHHHhCCC
Q 009871 153 -----------------ERLTGK---DQKISENFYVRG-DGTR-------------------AFYFSNDFLTSLFKENGF 192 (523)
Q Consensus 153 -----------------~~~~~~---~~~~~~~~~~~~-~g~~-------------------~~~~~~~~l~~ll~~~Gf 192 (523)
.+.+++ ++++.-.....+ .+.. -..++.+++.++|+++||
T Consensus 260 vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf 339 (358)
T 1zg3_A 260 VLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGF 339 (358)
T ss_dssp CGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTC
T ss_pred cccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCC
Confidence 233344 444332111111 1110 012488999999999999
Q ss_pred cEEEEEe
Q 009871 193 DVEELGL 199 (523)
Q Consensus 193 ~~~~~~~ 199 (523)
..+++..
T Consensus 340 ~~~~~~~ 346 (358)
T 1zg3_A 340 SSYKITP 346 (358)
T ss_dssp CEEEEEE
T ss_pred CeeEEEe
Confidence 9887754
No 457
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.76 E-value=3.5e-09 Score=100.84 Aligned_cols=47 Identities=21% Similarity=0.253 Sum_probs=41.6
Q ss_pred CCCCeEEEECCCccccHHHHHhh--CCCCEEEEEeCCHHHHHHHHhccc
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAA--YPDVFVYACDFSPRAVNLVMTHKD 120 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~--~~~~~v~gvD~S~~~l~~a~~~~~ 120 (523)
.++.+|||+|||+|.++..+++. .++.+|+|+|+|+.|++.|+++..
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLA 98 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHH
Confidence 35679999999999999999987 667789999999999999998653
No 458
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.76 E-value=7.5e-09 Score=101.29 Aligned_cols=76 Identities=13% Similarity=0.243 Sum_probs=63.1
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc-----CCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-----TETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
..+.+|||||||+|..+..++++.+..+|++||+|+.|++.|+++... ...+++++++|+.+. + +..+++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~-l--~~~~~~fD 170 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEF-M--KQNQDAFD 170 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH-H--HTCSSCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH-H--hhCCCCce
Confidence 567899999999999999999887778999999999999999997532 257899999998642 1 12357899
Q ss_pred EEEE
Q 009871 149 IVTM 152 (523)
Q Consensus 149 ~V~~ 152 (523)
+|++
T Consensus 171 ~Ii~ 174 (304)
T 2o07_A 171 VIIT 174 (304)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
No 459
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.75 E-value=3.8e-08 Score=96.25 Aligned_cols=109 Identities=18% Similarity=0.129 Sum_probs=75.5
Q ss_pred CCCeEEEECCCccHHHHHHHhcC-CCEEEEEcCChHHHHHHHHHHHh--cCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGS-ADLVVATDGDSIALDLLAQNVTA--NLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~-~~~V~~~D~~~~~l~~~~~n~~~--n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
.+++|||||||+|.++..+++.. ..+|+++|+|+.+++.+++|+.. ++.. ..++.+...|.. ..+ ....
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~--~~rv~v~~~Da~-----~~l-~~~~ 166 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYS--SSKLTLHVGDGF-----EFM-KQNQ 166 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG--CTTEEEEESCHH-----HHH-HTCS
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccC--CCcEEEEECcHH-----HHH-hhCC
Confidence 56899999999998888888774 46999999999999999999765 3321 145666543321 111 1235
Q ss_pred CCccEEEEccccCCC-----CChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEee
Q 009871 412 EGFEVILGTDVSYIP-----EAILPLFATAKELTASSNKSLREDQQPAFILCHIF 461 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~~-----~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~ 461 (523)
++||+|++. ..... .....+++.+.++| +|+|.+++....
T Consensus 167 ~~fD~Ii~d-~~~~~~~~~~l~~~~~l~~~~~~L---------kpgG~lv~~~~~ 211 (304)
T 2o07_A 167 DAFDVIITD-SSDPMGPAESLFKESYYQLMKTAL---------KEDGVLCCQGEC 211 (304)
T ss_dssp SCEEEEEEE-CC-----------CHHHHHHHHHE---------EEEEEEEEEEEC
T ss_pred CCceEEEEC-CCCCCCcchhhhHHHHHHHHHhcc---------CCCeEEEEecCC
Confidence 689999984 33211 12356899999999 679999886543
No 460
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.75 E-value=1.6e-08 Score=95.26 Aligned_cols=125 Identities=12% Similarity=0.105 Sum_probs=84.5
Q ss_pred CCCeEEEECCCccHHHHHHHhc----C-CCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhh
Q 009871 335 AGKKVLELGCGCGGICSMVAAG----S-ADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEE 409 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~----~-~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~ 409 (523)
++.+|||||||+|..+..++.. + ..+|+++|+++.+++.++ +. ..++.+...|..+...+. ..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~---~~~v~~~~gD~~~~~~l~---~~ 148 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SD---MENITLHQGDCSDLTTFE---HL 148 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GG---CTTEEEEECCSSCSGGGG---GG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------cc---CCceEEEECcchhHHHHH---hh
Confidence 4679999999999888888876 2 468999999999988876 11 146777776665431111 12
Q ss_pred cCCCccEEEEccccCCCCChHHHHHHHHH-HhhccCCCCCCCCCcEEEEEEee---cCCChhHHHHHHHHc--CCEEEEE
Q 009871 410 NNEGFEVILGTDVSYIPEAILPLFATAKE-LTASSNKSLREDQQPAFILCHIF---RQVDEPSMLSAATQC--GFRLVDK 483 (523)
Q Consensus 410 ~~~~fD~Ii~~d~~y~~~~~~~l~~~l~~-ll~~~~~~~~~~~~g~~~l~~~~---r~~~~~~~~~~~~~~--gf~~~~~ 483 (523)
...+||+|+.... + .....++..+.+ +| +|||.+++.... .......+.+.+++. +|++...
T Consensus 149 ~~~~fD~I~~d~~-~--~~~~~~l~~~~r~~L---------kpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~~~ 216 (236)
T 2bm8_A 149 REMAHPLIFIDNA-H--ANTFNIMKWAVDHLL---------EEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMDML 216 (236)
T ss_dssp SSSCSSEEEEESS-C--SSHHHHHHHHHHHTC---------CTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEETT
T ss_pred ccCCCCEEEECCc-h--HhHHHHHHHHHHhhC---------CCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEcch
Confidence 2337999997543 2 367888998886 99 779999985421 011223556666665 6777543
No 461
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.75 E-value=4.1e-09 Score=108.39 Aligned_cols=80 Identities=10% Similarity=0.059 Sum_probs=64.3
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
.+...++.+|||+|||+|..+..+++..+ ..+|+|+|+|+.|++.++++....+..+.+.++|+..+. ...+++||
T Consensus 96 ~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~---~~~~~~FD 172 (464)
T 3m6w_A 96 LLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALA---EAFGTYFH 172 (464)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHH---HHHCSCEE
T ss_pred hcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhh---hhccccCC
Confidence 34556789999999999999999998864 378999999999999999987543333889999987541 12357899
Q ss_pred EEEE
Q 009871 149 IVTM 152 (523)
Q Consensus 149 ~V~~ 152 (523)
+|++
T Consensus 173 ~Il~ 176 (464)
T 3m6w_A 173 RVLL 176 (464)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 462
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.75 E-value=1.2e-08 Score=98.51 Aligned_cols=120 Identities=17% Similarity=0.174 Sum_probs=82.1
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccc-----cCCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKD-----FTETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
+.+.+|||||||+|.++..++++.+..+|++||+++.|++.|+++.. ...++++++++|+.+. + +..+++||
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~-l--~~~~~~fD 150 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMH-I--AKSENQYD 150 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHH-H--HTCCSCEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH-H--hhCCCCee
Confidence 46789999999999999999987666799999999999999999752 2246899999998742 1 12357899
Q ss_pred EEEEccccc--ccee------eec-ceEEecCCeEEEee-----CH---HHHHHHHHhCCCcEEEE
Q 009871 149 IVTMERLTG--KDQK------ISE-NFYVRGDGTRAFYF-----SN---DFLTSLFKENGFDVEEL 197 (523)
Q Consensus 149 ~V~~~~~~~--~~~~------~~~-~~~~~~~g~~~~~~-----~~---~~l~~ll~~~Gf~~~~~ 197 (523)
+|++.-... .... +.. .-.++++|.++... .. ..+.+.+++. |..+..
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 215 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI-FPITKL 215 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh-CCCeEE
Confidence 999911110 0000 000 12577888877642 22 3455667666 766544
No 463
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.75 E-value=2.8e-08 Score=100.50 Aligned_cols=119 Identities=16% Similarity=0.112 Sum_probs=86.1
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCC---------------------------------------CEEEE
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSA---------------------------------------DLVVA 363 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~---------------------------------------~~V~~ 363 (523)
|+..|.......++.+|||+|||+|.+++.+|..+. .+|++
T Consensus 183 lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 183 LAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 666666555556788999999999988887776532 36999
Q ss_pred EcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCccEEEEccccCCC-----CChHHHHHHHHH
Q 009871 364 TDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIP-----EAILPLFATAKE 438 (523)
Q Consensus 364 ~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~-----~~~~~l~~~l~~ 438 (523)
+|+|+.|++.|+.|+..+++. ..+.+...|..+.. .+.+||+|+++.. |.. ..+..+.+.+.+
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~---~~i~~~~~D~~~l~--------~~~~~D~Iv~NPP-yg~rl~~~~~l~~ly~~lg~ 330 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVD---EYIEFNVGDATQFK--------SEDEFGFIITNPP-YGERLEDKDSVKQLYKELGY 330 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCG---GGEEEEECCGGGCC--------CSCBSCEEEECCC-CCCSHHHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCC---CceEEEECChhhcC--------cCCCCcEEEECCC-CcCccCCHHHHHHHHHHHHH
Confidence 999999999999999999875 46777766654421 1358999999765 442 345667777777
Q ss_pred HhhccCCCCCCCCCcEEEEEEe
Q 009871 439 LTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 439 ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
.|+. -+++.+++...
T Consensus 331 ~lk~-------~~g~~~~iit~ 345 (385)
T 3ldu_A 331 AFRK-------LKNWSYYLITS 345 (385)
T ss_dssp HHHT-------SBSCEEEEEES
T ss_pred HHhh-------CCCCEEEEEEC
Confidence 7832 13666666543
No 464
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.74 E-value=2.1e-08 Score=98.66 Aligned_cols=132 Identities=14% Similarity=0.144 Sum_probs=85.3
Q ss_pred CCCeEEEECCCccHHHHHHHhc-CCCEEEEEcCChHHHHHHHHHHHh-cCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAG-SADLVVATDGDSIALDLLAQNVTA-NLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~-~~~~V~~~D~~~~~l~~~~~n~~~-n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
.+++|||||||+|.++..+++. +..+|+++|+|+.+++.+++++.. |.......++.+...|..+ .+ ....+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~-----~l-~~~~~ 150 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARA-----YL-ERTEE 150 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHH-----HH-HHCCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHH-----HH-HhcCC
Confidence 4579999999999888888877 356999999999999999998764 2210012456665544321 11 12356
Q ss_pred CccEEEEccccCC-C-CC-----hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC-CC---hhHHHHHHHHcCCEEE
Q 009871 413 GFEVILGTDVSYI-P-EA-----ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ-VD---EPSMLSAATQCGFRLV 481 (523)
Q Consensus 413 ~fD~Ii~~d~~y~-~-~~-----~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~-~~---~~~~~~~~~~~gf~~~ 481 (523)
+||+|++.-.... . .. ...+++.+.++| +|||.+++...... .. ...+.+.+++. |...
T Consensus 151 ~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~L---------kpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~-F~~v 220 (314)
T 1uir_A 151 RYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHL---------NPGGVMGMQTGMILLTHHRVHPVVHRTVREA-FRYV 220 (314)
T ss_dssp CEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTE---------EEEEEEEEEEEEECC---CHHHHHHHHHHTT-CSEE
T ss_pred CccEEEECCCCcccccCcchhccHHHHHHHHHHhc---------CCCcEEEEEccCccccCHHHHHHHHHHHHHH-CCce
Confidence 8999998532221 0 11 478899999999 67999887654322 11 23455556555 4433
Q ss_pred E
Q 009871 482 D 482 (523)
Q Consensus 482 ~ 482 (523)
.
T Consensus 221 ~ 221 (314)
T 1uir_A 221 R 221 (314)
T ss_dssp E
T ss_pred E
Confidence 3
No 465
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.72 E-value=8.3e-09 Score=110.08 Aligned_cols=84 Identities=18% Similarity=0.155 Sum_probs=64.1
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhh-hhcCCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIK-EENNEG 413 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~-~~~~~~ 413 (523)
++.+|||||||.|.++..+|++|+ .|+|+|.++.+|+.|+..+..++.. .+.+...+. +.+. ...+++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~----~~~~~~~~~------~~~~~~~~~~~ 134 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDF----AAEFRVGRI------EEVIAALEEGE 134 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTS----EEEEEECCH------HHHHHHCCTTS
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCC----ceEEEECCH------HHHhhhccCCC
Confidence 567999999999999988988875 7999999999999999988876532 355544332 2221 234578
Q ss_pred ccEEEEccccCCCCCh
Q 009871 414 FEVILGTDVSYIPEAI 429 (523)
Q Consensus 414 fD~Ii~~d~~y~~~~~ 429 (523)
||+|++.+++++..+.
T Consensus 135 fD~v~~~e~~ehv~~~ 150 (569)
T 4azs_A 135 FDLAIGLSVFHHIVHL 150 (569)
T ss_dssp CSEEEEESCHHHHHHH
T ss_pred ccEEEECcchhcCCCH
Confidence 9999999999985543
No 466
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.72 E-value=6e-09 Score=98.03 Aligned_cols=78 Identities=22% Similarity=0.365 Sum_probs=60.8
Q ss_pred CCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCCccCC-CCCC--Cce
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISDDLSR-QISP--SSI 147 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~-~~~~--~~f 147 (523)
.++.+|||||||+|..+..+++..+ +++|+|+|+|+.+++.|+++.... ..+++++++|+.+. ++. +..+ ++|
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-l~~l~~~~~~~~f 149 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALAT-LEQLTQGKPLPEF 149 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH-HHHHHTSSSCCCE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH-HHHHHhcCCCCCc
Confidence 3567999999999999999999865 689999999999999999875332 24699999997531 000 1223 789
Q ss_pred eEEEE
Q 009871 148 DIVTM 152 (523)
Q Consensus 148 D~V~~ 152 (523)
|+|++
T Consensus 150 D~V~~ 154 (232)
T 3cbg_A 150 DLIFI 154 (232)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 99987
No 467
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.72 E-value=1.1e-08 Score=100.98 Aligned_cols=120 Identities=18% Similarity=0.211 Sum_probs=81.6
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc-----CCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-----TETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
+.+.+|||||||+|..+..+++..+..+|+++|+|+.|++.|+++... ...+++++++|+.+. + +..+++||
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~-l--~~~~~~fD 191 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF-L--ENVTNTYD 191 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH-H--HHCCSCEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHH-H--hhcCCCce
Confidence 467899999999999999999887778999999999999999997643 146899999998642 1 12357899
Q ss_pred EEEEcccc--ccceee------ec-ceEEecCCeEEEe-----eCHH---HHHHHHHhCCCcEEEE
Q 009871 149 IVTMERLT--GKDQKI------SE-NFYVRGDGTRAFY-----FSND---FLTSLFKENGFDVEEL 197 (523)
Q Consensus 149 ~V~~~~~~--~~~~~~------~~-~~~~~~~g~~~~~-----~~~~---~l~~ll~~~Gf~~~~~ 197 (523)
+|++.... .+...+ .. .-.++++|.++.. +..+ .+.+.+++. |..+..
T Consensus 192 vIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 256 (321)
T 2pt6_A 192 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL-FKKVEY 256 (321)
T ss_dssp EEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTT-CSEEEE
T ss_pred EEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CCCeEE
Confidence 99982110 111000 00 1257888887763 2333 344555554 665544
No 468
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.71 E-value=1e-08 Score=100.64 Aligned_cols=76 Identities=16% Similarity=0.235 Sum_probs=63.2
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc-----CCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-----TETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
..+.+|||||||+|..+..+++..+..+|+++|+|+.|++.|+++... ...+++++++|+.+. + +..+++||
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~-l--~~~~~~fD 183 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEF-L--KNHKNEFD 183 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHH-H--HHCTTCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHH-H--HhcCCCce
Confidence 466899999999999999999887778999999999999999997643 246899999998752 1 12467899
Q ss_pred EEEE
Q 009871 149 IVTM 152 (523)
Q Consensus 149 ~V~~ 152 (523)
+|++
T Consensus 184 ~Ii~ 187 (314)
T 2b2c_A 184 VIIT 187 (314)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
No 469
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.71 E-value=4.1e-08 Score=99.41 Aligned_cols=119 Identities=16% Similarity=0.148 Sum_probs=83.4
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCC---------------------------------------CEEEE
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSA---------------------------------------DLVVA 363 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~---------------------------------------~~V~~ 363 (523)
||..|.......++..|||++||+|.+++.+|..+. .+|++
T Consensus 189 lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 189 MAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 444444434445778999999999988877776532 35999
Q ss_pred EcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCccEEEEccccCCC-----CChHHHHHHHHH
Q 009871 364 TDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYIP-----EAILPLFATAKE 438 (523)
Q Consensus 364 ~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~-----~~~~~l~~~l~~ 438 (523)
+|+|+.|++.|+.|+..+++. ..+.+...|+.+.. .+.+||+|+++.. |.. ..+..+.+.+.+
T Consensus 269 vDid~~al~~Ar~Na~~~gl~---~~I~~~~~D~~~~~--------~~~~fD~Iv~NPP-Yg~rl~~~~~l~~ly~~lg~ 336 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLG---DLITFRQLQVADFQ--------TEDEYGVVVANPP-YGERLEDEEAVRQLYREMGI 336 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCT---TCSEEEECCGGGCC--------CCCCSCEEEECCC-CCCSHHHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCC---CceEEEECChHhCC--------CCCCCCEEEECCC-CccccCCchhHHHHHHHHHH
Confidence 999999999999999999886 45677666554321 1358999999754 442 345567777777
Q ss_pred HhhccCCCCCCCCCcEEEEEEe
Q 009871 439 LTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 439 ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
.|+. -+++.+++...
T Consensus 337 ~lk~-------~~g~~~~iit~ 351 (393)
T 3k0b_A 337 VYKR-------MPTWSVYVLTS 351 (393)
T ss_dssp HHHT-------CTTCEEEEEEC
T ss_pred HHhc-------CCCCEEEEEEC
Confidence 7732 24777766554
No 470
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.71 E-value=1.1e-08 Score=100.78 Aligned_cols=76 Identities=21% Similarity=0.217 Sum_probs=63.2
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc------CCCcEEEEEeeccCCccCCCCCCCce
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF------TETRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~------~~~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
+.+.+|||||||+|..+..++++.+..+|++||+|+.|++.|+++... ...+++++++|+.+. + +..+++|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~-l--~~~~~~f 152 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAY-L--ERTEERY 152 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHH-H--HHCCCCE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHH-H--HhcCCCc
Confidence 467899999999999999999887778999999999999999987532 246899999998752 1 1236789
Q ss_pred eEEEE
Q 009871 148 DIVTM 152 (523)
Q Consensus 148 D~V~~ 152 (523)
|+|++
T Consensus 153 D~Ii~ 157 (314)
T 1uir_A 153 DVVII 157 (314)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99999
No 471
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.71 E-value=6.5e-09 Score=99.59 Aligned_cols=69 Identities=13% Similarity=0.082 Sum_probs=52.1
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccc---cCCCcEEEE--EeeccCCccCCCCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKD---FTETRVSTF--VCDLISDDLSRQISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~---~~~~~v~~~--~~d~~~~~~~~~~~~~~fD 148 (523)
.++.+|||||||+|.++..++++ .+|+|||+|+ |+..+++... ..+.++.++ ++|+.++ ++++||
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l------~~~~fD 142 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTL------PVERTD 142 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTS------CCCCCS
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHC------CCCCCc
Confidence 56789999999999999999887 4599999999 6443332211 111268888 8999865 367899
Q ss_pred EEEE
Q 009871 149 IVTM 152 (523)
Q Consensus 149 ~V~~ 152 (523)
+|+|
T Consensus 143 ~V~s 146 (265)
T 2oxt_A 143 VIMC 146 (265)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
No 472
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.71 E-value=1.3e-08 Score=98.37 Aligned_cols=83 Identities=8% Similarity=0.019 Sum_probs=65.1
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCCC-CEEEEEeCCHHHHHHHHhccccCC-CcEEEEEeeccCCccCCCCCCCce
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYPD-VFVYACDFSPRAVNLVMTHKDFTE-TRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
++...++.+|||+|||+|..+..+++..++ .+|+|+|+|+.+++.++++....+ .+++++++|+..........+++|
T Consensus 78 ~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 78 VLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp HHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCE
T ss_pred HhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccC
Confidence 345567889999999999999999997655 899999999999999999865433 479999999976411000025689
Q ss_pred eEEEE
Q 009871 148 DIVTM 152 (523)
Q Consensus 148 D~V~~ 152 (523)
|+|++
T Consensus 158 D~Vl~ 162 (274)
T 3ajd_A 158 DKILL 162 (274)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 99998
No 473
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.71 E-value=2.6e-08 Score=103.54 Aligned_cols=72 Identities=22% Similarity=0.267 Sum_probs=59.8
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCCccCCCCCCCceeEEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISDDLSRQISPSSIDIVT 151 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 151 (523)
.++.+|||||||+|.++..+++. +..+|+|+|+|+ |++.|+++....+ .+++++++|+.+. +++ ++||+|+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~----~~~-~~fD~Iv 229 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV----SLP-EQVDIII 229 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC----CCS-SCEEEEE
T ss_pred cCCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC----ccC-CCeEEEE
Confidence 46789999999999999988875 456899999999 9999998764432 6799999999876 333 5899999
Q ss_pred E
Q 009871 152 M 152 (523)
Q Consensus 152 ~ 152 (523)
+
T Consensus 230 s 230 (480)
T 3b3j_A 230 S 230 (480)
T ss_dssp C
T ss_pred E
Confidence 9
No 474
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.71 E-value=1.5e-08 Score=98.92 Aligned_cols=120 Identities=12% Similarity=0.194 Sum_probs=80.9
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc-----CCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-----TETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
+.+.+|||||||+|..+..+++..+..+|+++|+|+.|++.|+++... ...+++++++|+.+. + +..+++||
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~-l--~~~~~~fD 165 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEY-V--RKFKNEFD 165 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH-G--GGCSSCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH-H--hhCCCCce
Confidence 456899999999999999999886678999999999999999997531 246899999998642 1 12357899
Q ss_pred EEEEcccc---ccceee------ec-ceEEecCCeEEEe-----eCH---HHHHHHHHhCCCcEEEE
Q 009871 149 IVTMERLT---GKDQKI------SE-NFYVRGDGTRAFY-----FSN---DFLTSLFKENGFDVEEL 197 (523)
Q Consensus 149 ~V~~~~~~---~~~~~~------~~-~~~~~~~g~~~~~-----~~~---~~l~~ll~~~Gf~~~~~ 197 (523)
+|++.-.. .....+ .. .-.++++|.++.. +.. ..+.+.+++. |..+..
T Consensus 166 ~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 231 (296)
T 1inl_A 166 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKV-FPITRV 231 (296)
T ss_dssp EEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHH-CSEEEE
T ss_pred EEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHH-CCceEE
Confidence 99982110 110000 00 1257888888764 222 3445556655 665544
No 475
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.70 E-value=9.1e-09 Score=111.93 Aligned_cols=140 Identities=13% Similarity=0.148 Sum_probs=90.3
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCC---CcEEEEEeeccCCccCCCCCCCceeEE
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTE---TRVSTFVCDLISDDLSRQISPSSIDIV 150 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~fD~V 150 (523)
.++.+|||+|||+|.++..++..+ ..+|+|||+|+.|++.|+++...++ .+++++++|+.+. + +...++||+|
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~-l--~~~~~~fD~I 613 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW-L--REANEQFDLI 613 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHH-H--HHCCCCEEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHH-H--HhcCCCccEE
Confidence 367899999999999999998864 3469999999999999999875443 3799999999752 1 2235789999
Q ss_pred EE--cccccccee-------------ee-c-ceEEecCCeEEEeeCH---HHHHHHHHhCCCcEEEEEeEeeeeeecccC
Q 009871 151 TM--ERLTGKDQK-------------IS-E-NFYVRGDGTRAFYFSN---DFLTSLFKENGFDVEELGLCCKQVENRARE 210 (523)
Q Consensus 151 ~~--~~~~~~~~~-------------~~-~-~~~~~~~g~~~~~~~~---~~l~~ll~~~Gf~~~~~~~~~~~~~~~~~~ 210 (523)
++ ..| ..... +. . .-.++++|.+++.... ..-.+.+.+.||+...+...... ......
T Consensus 614 i~DPP~f-~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~~~~~i~~~~lp-~df~~~ 691 (703)
T 3v97_A 614 FIDPPTF-SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLS-QDFARN 691 (703)
T ss_dssp EECCCSB-C-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTEEEEECTTTTCC-GGGTTC
T ss_pred EECCccc-cCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCCceeeeeeccCC-CCCCCC
Confidence 99 222 11110 00 0 1257788888764322 22356777888875444322211 122233
Q ss_pred ccceeEEEE
Q 009871 211 LVMNRRWVQ 219 (523)
Q Consensus 211 ~~~~r~~~~ 219 (523)
..+.++|.-
T Consensus 692 ~~ih~~w~i 700 (703)
T 3v97_A 692 RQIHNCWLI 700 (703)
T ss_dssp SSCCEEEEE
T ss_pred CcceEEEEE
Confidence 345677754
No 476
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.70 E-value=1.3e-07 Score=95.33 Aligned_cols=121 Identities=16% Similarity=0.081 Sum_probs=84.6
Q ss_pred HHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCC---------------------------------------CEEE
Q 009871 322 LMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSA---------------------------------------DLVV 362 (523)
Q Consensus 322 ~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~---------------------------------------~~V~ 362 (523)
.||..|.......++..|||.+||+|.+++.+|..+. .+|+
T Consensus 181 ~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~ 260 (384)
T 3ldg_A 181 NMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDIS 260 (384)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEE
Confidence 3555544444445788999999999988877776432 3599
Q ss_pred EEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCCCccEEEEccccCC----CCChHHHHHHHHH
Q 009871 363 ATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNEGFEVILGTDVSYI----PEAILPLFATAKE 438 (523)
Q Consensus 363 ~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~----~~~~~~l~~~l~~ 438 (523)
++|+|+.|++.|+.|+..+++. ..+.+...|..+.. .+.+||+|+++..... ...+..+.+.+.+
T Consensus 261 GvDid~~al~~Ar~Na~~~gl~---~~I~~~~~D~~~l~--------~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~ 329 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREVGLE---DVVKLKQMRLQDFK--------TNKINGVLISNPPYGERLLDDKAVDILYNEMGE 329 (384)
T ss_dssp EEESCHHHHHHHHHHHHHTTCT---TTEEEEECCGGGCC--------CCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHcCCC---CceEEEECChHHCC--------ccCCcCEEEECCchhhccCCHHHHHHHHHHHHH
Confidence 9999999999999999999886 45777666554321 1358999998654332 1345667777777
Q ss_pred HhhccCCCCCCCCCcEEEEEEe
Q 009871 439 LTASSNKSLREDQQPAFILCHI 460 (523)
Q Consensus 439 ll~~~~~~~~~~~~g~~~l~~~ 460 (523)
.|+. -+|+.+++...
T Consensus 330 ~lk~-------~~g~~~~iit~ 344 (384)
T 3ldg_A 330 TFAP-------LKTWSQFILTN 344 (384)
T ss_dssp HHTT-------CTTSEEEEEES
T ss_pred HHhh-------CCCcEEEEEEC
Confidence 8832 24777776654
No 477
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.70 E-value=7e-09 Score=106.55 Aligned_cols=126 Identities=11% Similarity=0.115 Sum_probs=88.2
Q ss_pred hhcCCCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccC-CCcEEEEEeeccCCccCCCCCCCce
Q 009871 70 YFSGAGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFT-ETRVSTFVCDLISDDLSRQISPSSI 147 (523)
Q Consensus 70 ~~~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~f 147 (523)
.+...++.+|||+|||+|..+..+++..+ ..+|+|+|+|+.+++.++++.... ..++.+.++|+..+. ...+++|
T Consensus 100 ~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~---~~~~~~F 176 (456)
T 3m4x_A 100 AAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELV---PHFSGFF 176 (456)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHH---HHHTTCE
T ss_pred HcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhh---hhccccC
Confidence 34556789999999999999999998743 478999999999999999987543 356899999987541 1235789
Q ss_pred eEEEE-cc-----ccccc--------------------eeeec-ceEEecCCeEEEee-------CHHHHHHHHHhCCCc
Q 009871 148 DIVTM-ER-----LTGKD--------------------QKISE-NFYVRGDGTRAFYF-------SNDFLTSLFKENGFD 193 (523)
Q Consensus 148 D~V~~-~~-----~~~~~--------------------~~~~~-~~~~~~~g~~~~~~-------~~~~l~~ll~~~Gf~ 193 (523)
|+|++ .. ..... ..+.. ..+++++|.++|-. ..+.+..++++.||+
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~~~ 256 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYPVT 256 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCCCE
Confidence 99998 10 00000 00000 12578899888732 345577888888877
Q ss_pred EEEEE
Q 009871 194 VEELG 198 (523)
Q Consensus 194 ~~~~~ 198 (523)
++.+.
T Consensus 257 l~~~~ 261 (456)
T 3m4x_A 257 IEEIP 261 (456)
T ss_dssp EECCC
T ss_pred EEecc
Confidence 66553
No 478
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.69 E-value=3.6e-08 Score=93.47 Aligned_cols=79 Identities=18% Similarity=0.177 Sum_probs=61.1
Q ss_pred cccchhhhHHHHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccC
Q 009871 56 FFKDRHYLDKEWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLIS 135 (523)
Q Consensus 56 f~~~~~~l~~~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~ 135 (523)
|..+...+ ..+-+.+...++.+|||||||+|.++..++++. ..+|+|+|+|+.|++.++++ . ..+++++++|+.+
T Consensus 13 fl~d~~i~-~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~-~--~~~v~~i~~D~~~ 87 (249)
T 3ftd_A 13 LLVSEGVL-KKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI-G--DERLEVINEDASK 87 (249)
T ss_dssp CEECHHHH-HHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS-C--CTTEEEECSCTTT
T ss_pred ccCCHHHH-HHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc-c--CCCeEEEEcchhh
Confidence 44343333 333344555678899999999999999999883 47899999999999999987 2 4679999999998
Q ss_pred CccC
Q 009871 136 DDLS 139 (523)
Q Consensus 136 ~~~~ 139 (523)
.+++
T Consensus 88 ~~~~ 91 (249)
T 3ftd_A 88 FPFC 91 (249)
T ss_dssp CCGG
T ss_pred CChh
Confidence 8544
No 479
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.69 E-value=3e-08 Score=96.16 Aligned_cols=86 Identities=17% Similarity=0.135 Sum_probs=63.3
Q ss_pred HHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcc
Q 009871 324 AAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 403 (523)
Q Consensus 324 a~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~ 403 (523)
++.+.......++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.+++++..++.. .++.+...|..+.
T Consensus 17 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~---~~v~~~~~D~~~~--- 89 (285)
T 1zq9_A 17 INSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA-KKVVACELDPRLVAELHKRVQGTPVA---SKLQVLVGDVLKT--- 89 (285)
T ss_dssp HHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTSTTG---GGEEEEESCTTTS---
T ss_pred HHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC-CEEEEEECCHHHHHHHHHHHHhcCCC---CceEEEEcceecc---
Confidence 3344443344578899999999999998888885 48999999999999999998765442 3567766655432
Q ss_pred hhhhhhcCCCccEEEEccc
Q 009871 404 EAIKEENNEGFEVILGTDV 422 (523)
Q Consensus 404 ~~~~~~~~~~fD~Ii~~d~ 422 (523)
+...||+|+++-.
T Consensus 90 ------~~~~fD~vv~nlp 102 (285)
T 1zq9_A 90 ------DLPFFDTCVANLP 102 (285)
T ss_dssp ------CCCCCSEEEEECC
T ss_pred ------cchhhcEEEEecC
Confidence 1237999999533
No 480
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.69 E-value=5.5e-08 Score=97.14 Aligned_cols=124 Identities=10% Similarity=0.020 Sum_probs=86.1
Q ss_pred CCCeEEEECCCccHHHHHHHhcCC------CEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhh
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSA------DLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKE 408 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~------~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~ 408 (523)
++.+|||+|||+|.++..++.... .+|+++|+++.+++.|+.|+..++. .+.+...|....
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-----~~~i~~~D~l~~-------- 196 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-----KMTLLHQDGLAN-------- 196 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-----CCEEEESCTTSC--------
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-----CceEEECCCCCc--------
Confidence 567999999999988888776542 5899999999999999999988765 234444443321
Q ss_pred hcCCCccEEEEccccCCCCC-----------------h-HHHHHHHHHHhhccCCCCCCCCCcEEEEEEeec---CCChh
Q 009871 409 ENNEGFEVILGTDVSYIPEA-----------------I-LPLFATAKELTASSNKSLREDQQPAFILCHIFR---QVDEP 467 (523)
Q Consensus 409 ~~~~~fD~Ii~~d~~y~~~~-----------------~-~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r---~~~~~ 467 (523)
....+||+|+++.++..... . ..++..+.++| +|+|.+++..+.. .....
T Consensus 197 ~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~L---------k~gG~~~~v~p~~~~~~~~~~ 267 (344)
T 2f8l_A 197 LLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYT---------KPGGYLFFLVPDAMFGTSDFA 267 (344)
T ss_dssp CCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTE---------EEEEEEEEEEEGGGGGSTTHH
T ss_pred cccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHh---------CCCCEEEEEECchhcCCchHH
Confidence 12468999999977421110 1 25788888888 5688887776442 22345
Q ss_pred HHHHHHHHcCCEE
Q 009871 468 SMLSAATQCGFRL 480 (523)
Q Consensus 468 ~~~~~~~~~gf~~ 480 (523)
.+.+.+.+.|+..
T Consensus 268 ~ir~~l~~~~~~~ 280 (344)
T 2f8l_A 268 KVDKFIKKNGHIE 280 (344)
T ss_dssp HHHHHHHHHEEEE
T ss_pred HHHHHHHhCCeEE
Confidence 6677777777643
No 481
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.69 E-value=1.9e-08 Score=91.59 Aligned_cols=67 Identities=16% Similarity=0.222 Sum_probs=51.5
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCC----CCC---CCc
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSR----QIS---PSS 146 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~----~~~---~~~ 146 (523)
.++.+|||+|||+|..+..++++ +.+|+|+|+++.+ ...+++++++|+.+..... .+. .++
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~----------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME----------EIAGVRFIRCDIFKETIFDDIDRALREEGIEK 91 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC----------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSS
T ss_pred CCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc----------cCCCeEEEEccccCHHHHHHHHHHhhcccCCc
Confidence 56889999999999999999988 6789999999852 1257899999998652100 011 148
Q ss_pred eeEEEE
Q 009871 147 IDIVTM 152 (523)
Q Consensus 147 fD~V~~ 152 (523)
||+|++
T Consensus 92 ~D~Vls 97 (191)
T 3dou_A 92 VDDVVS 97 (191)
T ss_dssp EEEEEE
T ss_pred ceEEec
Confidence 999998
No 482
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.68 E-value=1.9e-08 Score=97.56 Aligned_cols=120 Identities=18% Similarity=0.210 Sum_probs=81.7
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhcccc-----CCCcEEEEEeeccCCccCCCCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDF-----TETRVSTFVCDLISDDLSRQISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~fD 148 (523)
+++.+|||||||+|..+..+++..+..+|+++|+++.|++.|+++... ..++++++++|+.+. + +..+++||
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~-l--~~~~~~fD 153 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF-L--ENVTNTYD 153 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH-H--HHCCSCEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHH-H--HhCCCCce
Confidence 567899999999999999999887778999999999999999997643 247899999998752 1 11257899
Q ss_pred EEEEccc--cccceee------ec-ceEEecCCeEEEe-----eCHH---HHHHHHHhCCCcEEEE
Q 009871 149 IVTMERL--TGKDQKI------SE-NFYVRGDGTRAFY-----FSND---FLTSLFKENGFDVEEL 197 (523)
Q Consensus 149 ~V~~~~~--~~~~~~~------~~-~~~~~~~g~~~~~-----~~~~---~l~~ll~~~Gf~~~~~ 197 (523)
+|++... ......+ .. .-.++++|.++.. +..+ .+.+.+++. |..+..
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 218 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL-FKKVEY 218 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEEEE
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHH-CCceEE
Confidence 9999111 0111110 00 1257888888753 2333 344555554 765544
No 483
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.68 E-value=1e-08 Score=98.70 Aligned_cols=69 Identities=17% Similarity=0.138 Sum_probs=52.8
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccc---cCCCcEEEE--EeeccCCccCCCCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKD---FTETRVSTF--VCDLISDDLSRQISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~---~~~~~v~~~--~~d~~~~~~~~~~~~~~fD 148 (523)
.++.+|||+|||+|.++..++++ .+|+|||+|+ |+..++++.. ..+.++.++ ++|+..+ ++++||
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l------~~~~fD 150 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKM------EPFQAD 150 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGC------CCCCCS
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhC------CCCCcC
Confidence 46789999999999999999887 3599999999 7544433221 111268899 8999865 367899
Q ss_pred EEEE
Q 009871 149 IVTM 152 (523)
Q Consensus 149 ~V~~ 152 (523)
+|+|
T Consensus 151 ~Vvs 154 (276)
T 2wa2_A 151 TVLC 154 (276)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
No 484
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.67 E-value=5.1e-08 Score=95.26 Aligned_cols=79 Identities=22% Similarity=0.232 Sum_probs=57.8
Q ss_pred CCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcC
Q 009871 332 TIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENN 411 (523)
Q Consensus 332 ~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~ 411 (523)
...++.+|||+|||+|.++..++.. +.+|+++|+|+.+++.+++|+..++. .++.+...|..+. +.
T Consensus 39 ~~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~----~~v~~~~~D~~~~---------~~ 104 (299)
T 2h1r_A 39 KIKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGY----NNLEVYEGDAIKT---------VF 104 (299)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTC----CCEEC----CCSS---------CC
T ss_pred CCCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC----CceEEEECchhhC---------Cc
Confidence 3457789999999999888888877 45899999999999999999987654 3455555554332 12
Q ss_pred CCccEEEEccccCC
Q 009871 412 EGFEVILGTDVSYI 425 (523)
Q Consensus 412 ~~fD~Ii~~d~~y~ 425 (523)
.+||+|+++ ..|+
T Consensus 105 ~~~D~Vv~n-~py~ 117 (299)
T 2h1r_A 105 PKFDVCTAN-IPYK 117 (299)
T ss_dssp CCCSEEEEE-CCGG
T ss_pred ccCCEEEEc-CCcc
Confidence 489999985 4444
No 485
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.67 E-value=2.7e-08 Score=91.07 Aligned_cols=112 Identities=15% Similarity=0.186 Sum_probs=73.3
Q ss_pred CCCCeEEEECCCccccHHHHHhhCC--CCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccC------------
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYP--DVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLS------------ 139 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~--~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~------------ 139 (523)
.++.+|||+|||+|..+..++++.+ +.+|+|+|+|+.+ ...+++++++|+.+....
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------CCCCceEEEccccchhhhhhcccccccccc
Confidence 4678999999999999999999976 6899999999931 124689999999865200
Q ss_pred ---------CCCCCCceeEEEEc---ccc-----ccce-------eee-cceEEecCCeEEEe-e---CHHHHHHHHHhC
Q 009871 140 ---------RQISPSSIDIVTME---RLT-----GKDQ-------KIS-ENFYVRGDGTRAFY-F---SNDFLTSLFKEN 190 (523)
Q Consensus 140 ---------~~~~~~~fD~V~~~---~~~-----~~~~-------~~~-~~~~~~~~g~~~~~-~---~~~~l~~ll~~~ 190 (523)
..+++++||+|++. ... .... .+. -...++++|.++.. + +..++...+..
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~- 169 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKG- 169 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHT-
T ss_pred chhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHH-
Confidence 00456799999981 110 0000 000 01257888887652 2 34567777765
Q ss_pred CCcEEE
Q 009871 191 GFDVEE 196 (523)
Q Consensus 191 Gf~~~~ 196 (523)
.|..+.
T Consensus 170 ~f~~v~ 175 (201)
T 2plw_A 170 MFQLVH 175 (201)
T ss_dssp TEEEEE
T ss_pred HHheEE
Confidence 465443
No 486
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.67 E-value=6.6e-08 Score=98.95 Aligned_cols=115 Identities=10% Similarity=0.056 Sum_probs=76.7
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEEc
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTME 153 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 153 (523)
.++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|+++...++..++|+++|+.+. . + .+||+|++.
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~----~-~-~~fD~Vv~d 360 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREV----S-V-KGFDTVIVD 360 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTC----C-C-TTCSEEEEC
T ss_pred CCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHc----C-c-cCCCEEEEc
Confidence 46789999999999999999987 45799999999999999998754332399999999865 1 2 289999991
Q ss_pred cccc-cceee-ecceEEecCCeEEEeeCHHHHHHHHHhCCCcEEE
Q 009871 154 RLTG-KDQKI-SENFYVRGDGTRAFYFSNDFLTSLFKENGFDVEE 196 (523)
Q Consensus 154 ~~~~-~~~~~-~~~~~~~~~g~~~~~~~~~~l~~ll~~~Gf~~~~ 196 (523)
.-.. ....+ .....++++|..+.-..+..+.+-+....|.+.+
T Consensus 361 PPr~g~~~~~~~~l~~l~p~givyvsc~p~tlarDl~~l~y~l~~ 405 (425)
T 2jjq_A 361 PPRAGLHPRLVKRLNREKPGVIVYVSCNPETFARDVKMLDYRIDE 405 (425)
T ss_dssp CCTTCSCHHHHHHHHHHCCSEEEEEESCHHHHHHHHHHSSCCEEE
T ss_pred CCccchHHHHHHHHHhcCCCcEEEEECChHHHHhHHhhCeEEEEE
Confidence 1100 00001 0011245666665555666665544433244443
No 487
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.66 E-value=1.6e-08 Score=97.96 Aligned_cols=74 Identities=14% Similarity=0.166 Sum_probs=61.2
Q ss_pred CCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccc----c-------CCCcEEEEEeeccCCccCCCC
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKD----F-------TETRVSTFVCDLISDDLSRQI 142 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~----~-------~~~~v~~~~~d~~~~~~~~~~ 142 (523)
..+.+|||||||+|..+..+++. +..+|++||+++.|++.|+++.. . ...+++++++|+.+. + +.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~-l--~~ 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEF-I--KN 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHH-H--HH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHH-h--cc
Confidence 46789999999999999999988 67799999999999999998761 1 246899999998642 1 11
Q ss_pred CCCceeEEEE
Q 009871 143 SPSSIDIVTM 152 (523)
Q Consensus 143 ~~~~fD~V~~ 152 (523)
+++||+|++
T Consensus 150 -~~~fD~Ii~ 158 (281)
T 1mjf_A 150 -NRGFDVIIA 158 (281)
T ss_dssp -CCCEEEEEE
T ss_pred -cCCeeEEEE
Confidence 578999999
No 488
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.66 E-value=1.5e-08 Score=102.64 Aligned_cols=73 Identities=15% Similarity=0.106 Sum_probs=57.5
Q ss_pred CCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 75 GRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 75 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
++.+|||+|||+|..+..+++. ++.|+|+|+|+.|++.|+++...++...++.++|+.+. ++ .. .+.||+|++
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~-l~-~~-~~~fD~Ii~ 286 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPT-LR-GL-EGPFHHVLL 286 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHH-HH-TC-CCCEEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHH-HH-Hh-cCCCCEEEE
Confidence 4889999999999999999987 45599999999999999998755443346778888753 11 12 334999998
No 489
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.65 E-value=3.5e-08 Score=95.04 Aligned_cols=116 Identities=14% Similarity=0.084 Sum_probs=72.1
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCC--CCCCceEEE--
Q 009871 318 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKP--PFLAKLITK-- 393 (523)
Q Consensus 318 ~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~--~~~~~v~~~-- 393 (523)
.++..|.+.+.. ..+.++.+|||||||+|.++..++.. .+|+++|+++ |+..++++ ... ....++.+.
T Consensus 66 R~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~----~~~~~~~~~~v~~~~~ 137 (276)
T 2wa2_A 66 RGTAKLAWIDER-GGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEK----PRLVETFGWNLITFKS 137 (276)
T ss_dssp HHHHHHHHHHHT-TSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCC----CCCCCCTTGGGEEEEC
T ss_pred hHHHHHHHHHHc-CCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhc----hhhhhhcCCCeEEEec
Confidence 455556666655 44457889999999999998888887 5799999998 53332211 110 000134443
Q ss_pred eeecCCCCcchhhhhhcCCCccEEEEccccCCCCCh----H---HHHHHHHHHhhccCCCCCCCCCc--EEEEEEe
Q 009871 394 RLEWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAI----L---PLFATAKELTASSNKSLREDQQP--AFILCHI 460 (523)
Q Consensus 394 ~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~----~---~l~~~l~~ll~~~~~~~~~~~~g--~~~l~~~ 460 (523)
..|.. .+++++||+|++.-. ...... . .+++.+.++| +||| .+++...
T Consensus 138 ~~D~~---------~l~~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~L---------kpGG~~~~v~~~~ 194 (276)
T 2wa2_A 138 KVDVT---------KMEPFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWL---------EYNQGCGFCVKVL 194 (276)
T ss_dssp SCCGG---------GCCCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHH---------HHSTTCEEEEEES
T ss_pred cCcHh---------hCCCCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHh---------ccCCCcEEEEEeC
Confidence 32221 234578999999644 332221 1 3678888999 6799 8777443
No 490
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.65 E-value=7.9e-09 Score=98.09 Aligned_cols=78 Identities=18% Similarity=0.164 Sum_probs=61.9
Q ss_pred HhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCC-CC
Q 009871 67 WGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQIS-PS 145 (523)
Q Consensus 67 ~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~ 145 (523)
+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.|+++.. ...+++++++|+.+. +++ ++
T Consensus 21 i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~----~~~~~~ 93 (245)
T 1yub_A 21 IIKQLNLKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQF----QFPNKQ 93 (245)
T ss_dssp HHHHCCCCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTTT----TCCCSS
T ss_pred HHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhhc----CcccCC
Confidence 3344455677899999999999999999984 789999999999999988764 346799999999877 344 36
Q ss_pred ceeEEEE
Q 009871 146 SIDIVTM 152 (523)
Q Consensus 146 ~fD~V~~ 152 (523)
+| .|++
T Consensus 94 ~f-~vv~ 99 (245)
T 1yub_A 94 RY-KIVG 99 (245)
T ss_dssp EE-EEEE
T ss_pred Cc-EEEE
Confidence 78 4555
No 491
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.65 E-value=3.6e-08 Score=88.29 Aligned_cols=102 Identities=18% Similarity=0.027 Sum_probs=70.1
Q ss_pred CCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCCCCceeEEEE
Q 009871 73 GAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQISPSSIDIVTM 152 (523)
Q Consensus 73 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 152 (523)
..++.+|||||||. +++|+|+.|++.|+++.. .++++.++|+.++.+. ++++++||+|++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~---~~~~~~~~d~~~~~~~-~~~~~~fD~V~~ 69 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG---NEGRVSVENIKQLLQS-AHKESSFDIILS 69 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT---TTSEEEEEEGGGGGGG-CCCSSCEEEEEE
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc---cCcEEEEechhcCccc-cCCCCCEeEEEE
Confidence 46789999999996 238999999999998753 2489999999976211 127889999999
Q ss_pred ---cccc-ccce-eeec-ceEEecCCeEEEe-------------eCHHHHHHHHHhCCCcEE
Q 009871 153 ---ERLT-GKDQ-KISE-NFYVRGDGTRAFY-------------FSNDFLTSLFKENGFDVE 195 (523)
Q Consensus 153 ---~~~~-~~~~-~~~~-~~~~~~~g~~~~~-------------~~~~~l~~ll~~~Gf~~~ 195 (523)
.... .... .+.+ ...++++|.+++. ++.+++.++|+++|| +.
T Consensus 70 ~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 70 GLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp CCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred CChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cE
Confidence 1111 1111 1100 1246666665541 258899999999999 44
No 492
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.64 E-value=6.7e-08 Score=93.67 Aligned_cols=87 Identities=16% Similarity=0.126 Sum_probs=64.1
Q ss_pred HHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcc
Q 009871 324 AAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHI 403 (523)
Q Consensus 324 a~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~ 403 (523)
.+.+.+.....++.+|||||||+|.++..++.. +.+|+++|+|+.+++.+++++.. ..++.+...|..+.+
T Consensus 39 ~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~------~~~v~vi~gD~l~~~-- 109 (295)
T 3gru_A 39 VNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKEL------YNNIEIIWGDALKVD-- 109 (295)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHH------CSSEEEEESCTTTSC--
T ss_pred HHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhcc------CCCeEEEECchhhCC--
Confidence 333434344557889999999999999988887 56899999999999999999873 145777766665431
Q ss_pred hhhhhhcCCCccEEEEccccCC
Q 009871 404 EAIKEENNEGFEVILGTDVSYI 425 (523)
Q Consensus 404 ~~~~~~~~~~fD~Ii~~d~~y~ 425 (523)
++...||+|+++ +.|+
T Consensus 110 -----~~~~~fD~Iv~N-lPy~ 125 (295)
T 3gru_A 110 -----LNKLDFNKVVAN-LPYQ 125 (295)
T ss_dssp -----GGGSCCSEEEEE-CCGG
T ss_pred -----cccCCccEEEEe-Cccc
Confidence 223479999987 4443
No 493
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.64 E-value=2.1e-08 Score=95.87 Aligned_cols=128 Identities=12% Similarity=0.049 Sum_probs=83.6
Q ss_pred CCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHh--cCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 335 AGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTA--NLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 335 ~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~--n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
.+++|||||||+|.++..+++.+ .+|+++|+++.+++.+++++.. ++.. ..++.+...|-.+ +. +
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~--~~rv~~~~~D~~~---------~~-~ 138 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKN--NKNFTHAKQLLDL---------DI-K 138 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHT--CTTEEEESSGGGS---------CC-C
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccC--CCeEEEEechHHH---------HH-h
Confidence 45799999999998888888775 8999999999999999876532 1111 2456554322211 11 5
Q ss_pred CccEEEEccccCCCCChHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecCCChhH---HHHHHHHcCCEEEEEcCCCCC
Q 009871 413 GFEVILGTDVSYIPEAILPLFATAKELTASSNKSLREDQQPAFILCHIFRQVDEPS---MLSAATQCGFRLVDKWPSKNS 489 (523)
Q Consensus 413 ~fD~Ii~~d~~y~~~~~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~~~~~~---~~~~~~~~gf~~~~~~~~~~~ 489 (523)
+||+|++. . .....+++.+.++| +|||.+++........... +...+++. |.....+....|
T Consensus 139 ~fD~Ii~d-~----~dp~~~~~~~~~~L---------~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~~~~~~~~vP 203 (262)
T 2cmg_A 139 KYDLIFCL-Q----EPDIHRIDGLKRML---------KEDGVFISVAKHPLLEHVSMQNALKNMGGV-FSVAMPFVAPLR 203 (262)
T ss_dssp CEEEEEES-S----CCCHHHHHHHHTTE---------EEEEEEEEEEECTTTCHHHHHHHHHHHHTT-CSEEEEECCTTC
T ss_pred hCCEEEEC-C----CChHHHHHHHHHhc---------CCCcEEEEEcCCcccCHHHHHHHHHHHHHh-CCceEEEEEccC
Confidence 89999985 2 22335899999999 6799998865443333222 33344443 666666554333
Q ss_pred C
Q 009871 490 A 490 (523)
Q Consensus 490 ~ 490 (523)
.
T Consensus 204 ~ 204 (262)
T 2cmg_A 204 I 204 (262)
T ss_dssp T
T ss_pred C
Confidence 3
No 494
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.64 E-value=2e-08 Score=94.09 Aligned_cols=79 Identities=18% Similarity=0.244 Sum_probs=61.5
Q ss_pred CCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccC--CCcEEEEEeeccCC--ccCCCCCCCcee
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFT--ETRVSTFVCDLISD--DLSRQISPSSID 148 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~--~~~v~~~~~d~~~~--~~~~~~~~~~fD 148 (523)
.++.+|||||||+|..+..+++..+ +.+|+|+|+|+.+++.|+++.... ..+++++++|+.+. .++.....++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 4678999999999999999998865 689999999999999999876433 25799999998642 111000116899
Q ss_pred EEEE
Q 009871 149 IVTM 152 (523)
Q Consensus 149 ~V~~ 152 (523)
+|++
T Consensus 148 ~v~~ 151 (229)
T 2avd_A 148 VAVV 151 (229)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9988
No 495
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.63 E-value=2.9e-08 Score=94.25 Aligned_cols=84 Identities=8% Similarity=-0.008 Sum_probs=59.5
Q ss_pred HHhhhhcCCCCCeEEEECCCccccHHHHHhhCCCCEEEEEeCCHHHHHHHHhccccCCCcEEEEEeeccCCccCCCCC-C
Q 009871 66 EWGRYFSGAGRKDVLEVGCGAGNTIFPLIAAYPDVFVYACDFSPRAVNLVMTHKDFTETRVSTFVCDLISDDLSRQIS-P 144 (523)
Q Consensus 66 ~~~~~~~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~-~ 144 (523)
.+-+.+...++.+|||||||+|.++. +. +.+..+|+|+|+++.|++.++++.... .+++++++|+.+.+++..+. +
T Consensus 12 ~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~-~~v~~i~~D~~~~~~~~~~~~~ 88 (252)
T 1qyr_A 12 SIVSAINPQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLG-PKLTIYQQDAMTFNFGELAEKM 88 (252)
T ss_dssp HHHHHHCCCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTG-GGEEEECSCGGGCCHHHHHHHH
T ss_pred HHHHhcCCCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccC-CceEEEECchhhCCHHHhhccc
Confidence 33344455677899999999999999 64 443334999999999999999876432 57999999999874432110 1
Q ss_pred CceeEEEE
Q 009871 145 SSIDIVTM 152 (523)
Q Consensus 145 ~~fD~V~~ 152 (523)
+..|.|++
T Consensus 89 ~~~~~vvs 96 (252)
T 1qyr_A 89 GQPLRVFG 96 (252)
T ss_dssp TSCEEEEE
T ss_pred CCceEEEE
Confidence 23466666
No 496
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.63 E-value=7.9e-08 Score=98.73 Aligned_cols=126 Identities=19% Similarity=0.150 Sum_probs=84.5
Q ss_pred HHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhc--CCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCC
Q 009871 323 MAAVLARNPTIVAGKKVLELGCGCGGICSMVAAG--SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNR 400 (523)
Q Consensus 323 la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~--~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~ 400 (523)
+++++.+.....++.+|||+|||+|.++..++.. ...+|+++|+++.+++.| .++.+...|..+.
T Consensus 27 l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------~~~~~~~~D~~~~ 93 (421)
T 2ih2_A 27 VVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------PWAEGILADFLLW 93 (421)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------------TTEEEEESCGGGC
T ss_pred HHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------------CCCcEEeCChhhc
Confidence 4455544333335679999999999888888875 356899999999998766 2345555444322
Q ss_pred CcchhhhhhcCCCccEEEEccccCCCCC-----------------------------hHHHHHHHHHHhhccCCCCCCCC
Q 009871 401 DHIEAIKEENNEGFEVILGTDVSYIPEA-----------------------------ILPLFATAKELTASSNKSLREDQ 451 (523)
Q Consensus 401 ~~~~~~~~~~~~~fD~Ii~~d~~y~~~~-----------------------------~~~l~~~l~~ll~~~~~~~~~~~ 451 (523)
...++||+|+++........ ...++..+.++| ++
T Consensus 94 --------~~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~L---------k~ 156 (421)
T 2ih2_A 94 --------EPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLL---------KP 156 (421)
T ss_dssp --------CCSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHE---------EE
T ss_pred --------CccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHh---------CC
Confidence 12358999999865543221 225678888888 56
Q ss_pred CcEEEEEEeecCC---ChhHHHHHHHHcCC
Q 009871 452 QPAFILCHIFRQV---DEPSMLSAATQCGF 478 (523)
Q Consensus 452 ~g~~~l~~~~r~~---~~~~~~~~~~~~gf 478 (523)
+|.+.+....... ....+.+.+.+.|+
T Consensus 157 ~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 157 GGVLVFVVPATWLVLEDFALLREFLAREGK 186 (421)
T ss_dssp EEEEEEEEEGGGGTCGGGHHHHHHHHHHSE
T ss_pred CCEEEEEEChHHhcCccHHHHHHHHHhcCC
Confidence 8988877765422 23467777777776
No 497
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.62 E-value=4.3e-08 Score=93.86 Aligned_cols=116 Identities=15% Similarity=0.127 Sum_probs=72.2
Q ss_pred hhHHHHHHHHhcCCCCCCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCChHHHHHHHHHHHhcCCCC--CCCceEEE--
Q 009871 318 ESAHLMAAVLARNPTIVAGKKVLELGCGCGGICSMVAAGSADLVVATDGDSIALDLLAQNVTANLKPP--FLAKLITK-- 393 (523)
Q Consensus 318 ~~a~~la~~l~~~~~~~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~~~l~~~~~n~~~n~~~~--~~~~v~~~-- 393 (523)
.++..|.+.+.. ..+.++.+|||||||+|+++..++.. .+|+++|+++ |+..++++ .... ....+.+.
T Consensus 58 R~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~----~~~~~~~~~~v~~~~~ 129 (265)
T 2oxt_A 58 RGTAKLAWMEER-GYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEV----PRITESYGWNIVKFKS 129 (265)
T ss_dssp THHHHHHHHHHH-TSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCC----CCCCCBTTGGGEEEEC
T ss_pred hHHHHHHHHHHc-CCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhh----hhhhhccCCCeEEEec
Confidence 456667666665 44457889999999999998888877 5799999998 53222211 1100 00134443
Q ss_pred eeecCCCCcchhhhhhcCCCccEEEEccccCCCCCh----H---HHHHHHHHHhhccCCCCCCCCCc--EEEEEEe
Q 009871 394 RLEWGNRDHIEAIKEENNEGFEVILGTDVSYIPEAI----L---PLFATAKELTASSNKSLREDQQP--AFILCHI 460 (523)
Q Consensus 394 ~ldw~~~~~~~~~~~~~~~~fD~Ii~~d~~y~~~~~----~---~l~~~l~~ll~~~~~~~~~~~~g--~~~l~~~ 460 (523)
..|.. .+++.+||+|++.-. ...... . .+++.+.++| +||| .+++...
T Consensus 130 ~~D~~---------~l~~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~L---------kpGG~~~fv~kv~ 186 (265)
T 2oxt_A 130 RVDIH---------TLPVERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWK---------VKNPSADFVVKVL 186 (265)
T ss_dssp SCCTT---------TSCCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHH---------HHCTTCEEEEEES
T ss_pred ccCHh---------HCCCCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHh---------ccCCCeEEEEEeC
Confidence 33322 133568999999544 322221 1 2678888999 6799 7777443
No 498
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.62 E-value=3.1e-08 Score=93.51 Aligned_cols=79 Identities=22% Similarity=0.314 Sum_probs=61.9
Q ss_pred CCCCeEEEECCCccccHHHHHhhCC-CCEEEEEeCCHHHHHHHHhccccCC--CcEEEEEeeccCC-c-c---------C
Q 009871 74 AGRKDVLEVGCGAGNTIFPLIAAYP-DVFVYACDFSPRAVNLVMTHKDFTE--TRVSTFVCDLISD-D-L---------S 139 (523)
Q Consensus 74 ~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~--~~v~~~~~d~~~~-~-~---------~ 139 (523)
.++.+|||||||+|..+..+++..+ +.+|+|+|+|+.+++.|+++....+ .++++.++|+.+. . + .
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 4678999999999999999999876 6899999999999999999764322 3599999998642 0 0 1
Q ss_pred CCCCC--CceeEEEE
Q 009871 140 RQISP--SSIDIVTM 152 (523)
Q Consensus 140 ~~~~~--~~fD~V~~ 152 (523)
..|++ ++||+|++
T Consensus 139 ~~f~~~~~~fD~I~~ 153 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFL 153 (239)
T ss_dssp TTTCCSTTCEEEEEE
T ss_pred ccccCCCCCcCEEEE
Confidence 12333 78999987
No 499
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.60 E-value=5e-08 Score=92.96 Aligned_cols=81 Identities=11% Similarity=-0.009 Sum_probs=60.4
Q ss_pred CCCCeEEEECCCccHHHHHHHhcCCCEEEEEcCCh-------HHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhh
Q 009871 334 VAGKKVLELGCGCGGICSMVAAGSADLVVATDGDS-------IALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAI 406 (523)
Q Consensus 334 ~~~~~VLElG~G~G~l~~~~a~~~~~~V~~~D~~~-------~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~ 406 (523)
.++.+|||+|||+|.++..++..+ .+|+++|+++ .+++.+++|++.|+.. .++.+...|..+. +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g-~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~---~ri~~~~~d~~~~-----l 152 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLG-LTVTAFEQHPAVACLLSDGIRRALLNPETQDTA---ARINLHFGNAAEQ-----M 152 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTT-CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH---TTEEEEESCHHHH-----H
T ss_pred CCcCeEEEeeCccCHHHHHHHHhC-CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCc---cCeEEEECCHHHH-----H
Confidence 467899999999999988888875 4799999999 9999999999888764 3466665443221 1
Q ss_pred hhhcC--CCccEEEEcccc
Q 009871 407 KEENN--EGFEVILGTDVS 423 (523)
Q Consensus 407 ~~~~~--~~fD~Ii~~d~~ 423 (523)
..+.+ .+||+|+...+.
T Consensus 153 ~~~~~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 153 PALVKTQGKPDIVYLDPMY 171 (258)
T ss_dssp HHHHHHHCCCSEEEECCCC
T ss_pred HhhhccCCCccEEEECCCC
Confidence 12222 589999985443
No 500
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.59 E-value=1.3e-07 Score=89.78 Aligned_cols=113 Identities=12% Similarity=0.085 Sum_probs=77.4
Q ss_pred CeEEEECCCc--cHHHHHHHhc--CCCEEEEEcCChHHHHHHHHHHHhcCCCCCCCceEEEeeecCCCCcchhhhhhcCC
Q 009871 337 KKVLELGCGC--GGICSMVAAG--SADLVVATDGDSIALDLLAQNVTANLKPPFLAKLITKRLEWGNRDHIEAIKEENNE 412 (523)
Q Consensus 337 ~~VLElG~G~--G~l~~~~a~~--~~~~V~~~D~~~~~l~~~~~n~~~n~~~~~~~~v~~~~ldw~~~~~~~~~~~~~~~ 412 (523)
.+|||||||+ ++....+++. ...+|+++|.|+.||+.++.++..+. ..++.+...|..+...+-. .+....
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~----~~~~~~v~aD~~~~~~~l~-~~~~~~ 154 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP----EGRTAYVEADMLDPASILD-APELRD 154 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS----SSEEEEEECCTTCHHHHHT-CHHHHT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC----CCcEEEEEecccChhhhhc-cccccc
Confidence 6899999997 3344444443 34689999999999999998876432 2467777777655321000 000012
Q ss_pred Ccc-----EEEEccccCCCCC---hHHHHHHHHHHhhccCCCCCCCCCcEEEEEEeecC
Q 009871 413 GFE-----VILGTDVSYIPEA---ILPLFATAKELTASSNKSLREDQQPAFILCHIFRQ 463 (523)
Q Consensus 413 ~fD-----~Ii~~d~~y~~~~---~~~l~~~l~~ll~~~~~~~~~~~~g~~~l~~~~r~ 463 (523)
.|| .|+++-++++... ...+++.+.+.| +|||.+++++....
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L---------~PGG~Lvls~~~~d 204 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPL---------PSGSYLAMSIGTAE 204 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTS---------CTTCEEEEEEECCT
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhC---------CCCcEEEEEeccCC
Confidence 344 5778888888665 467999999999 78999999987754
Done!