BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009872
(523 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 228/483 (47%), Gaps = 32/483 (6%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSK-PHVSFWELSKKYGPLMSLRLGFVPSLVVSS 101
K+S K PPGP G P IG H + K PH++ +S++YG ++ +R+G P +V+S
Sbjct: 4 KTSSKGLKNPPGPWGWPLIG--HMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSG 61
Query: 102 AKMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSP-YDEYWREIRKICVIHL----L 156
++ L F RP L +S NG ++FSP W R++ L +
Sbjct: 62 LDTIRQALVRQGDDFKGRPDLYTFTLIS-NGQSMSFSPDSGPVWAARRRLAQNGLKSFSI 120
Query: 157 NSNKVQNFRPIREDEVSR----MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRY 212
S+ + E+ VS+ +I + + +A N ++ + +IC I FG+RY
Sbjct: 121 ASDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRY 180
Query: 213 DED-EATSARSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDR-- 269
D + + + E S D+ P + ++ + N F++L+
Sbjct: 181 DHNHQELLSLVNLNNNFGEVVG---SGNPADFIPILRYLPNPS------LNAFKDLNEKF 231
Query: 270 --FYQELIDEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAG 327
F Q+++ EH + +I+ + + D V L+ + I +++++F AG
Sbjct: 232 YSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAG 291
Query: 328 TDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMR 387
DT + W++ YL NPR +K+Q E+ ++IG ++ D L Y++A + ET R
Sbjct: 292 FDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRR-PRLSDRSHLPYMEAFILETFR 350
Query: 388 LQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFV--DS 445
VP +P + ++G+ IP VFVN W I D + W NP EF PERF+ D
Sbjct: 351 HSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDG 410
Query: 446 CIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLKSHDFDVLPG 505
ID K + ++I FG G+R C G + V L LA LL + ++ +P G+K D + G
Sbjct: 411 AID-KVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKV-DMTPIYG 468
Query: 506 LAM 508
L M
Sbjct: 469 LTM 471
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 223/468 (47%), Gaps = 23/468 (4%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K + + KLPPGP LP +GNL Q D SF L +KYG + ++ LG P +V+
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQ 162
+E L F R + + + G + F+ E WR +R+ + + + +
Sbjct: 63 DAIREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSLATMRDFGMGK 120
Query: 163 NFRPIREDEVSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSAR 221
R E +R ++E++ KS A L++ + + S+TS IIC I FGKR+D +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGA--LLDNTLLFHSITSNIICSIVFGKRFDYKDPVFL- 177
Query: 222 SRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEH--- 278
R L ++ +L SF + F G++ F G +++ N QE++ F + +++H
Sbjct: 178 -RLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRAT 236
Query: 279 LDPNRTKSKLPQQEDIIDV-LLQIRKDRGF-KVDLTLDNIKAVLMNVFVAGTDTSAATVV 336
LDP+ + D IDV LL++ KD+ + N+ ++++F AGT+T++ T+
Sbjct: 237 LDPSNPR-------DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLR 289
Query: 337 WAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLL 396
+ + K P ++VQ EI +IG ++ DD ++ Y AV+ E RL +P +
Sbjct: 290 YGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDLIPFGV 348
Query: 397 PREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFEL 456
P + GY IP T VF + DP ++ P F P F+D+ K +N
Sbjct: 349 PHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGF 407
Query: 457 IPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLKSHDFDVLP 504
+PF G+RIC G + + L +L F P + D D+ P
Sbjct: 408 MPFSLGKRICAGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLTP 453
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 225/470 (47%), Gaps = 27/470 (5%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K + + KLPPGP LP +GNL Q D SF L +KYG + ++ LG P +V+
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQ 162
+E L F R + + + G + F+ E WR +R+ + + + +
Sbjct: 63 DAIREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSLATMRDFGMGK 120
Query: 163 NFRPIREDEVSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSAR 221
R E +R ++E++ KS A L++ + + S+TS IIC I FGKR+D +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGA--LLDNTLLFHSITSNIICSIVFGKRFDYKDPVFL- 177
Query: 222 SRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEH--- 278
R L ++ +L SF + F G++ F G +++ N QE++ F + +++H
Sbjct: 178 -RLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRAT 236
Query: 279 LDPNRTKSKLPQQEDIIDV-LLQIRKDRGF-KVDLTLDNIKAVLMNVFVAGTDTSAATVV 336
LDP+ + D IDV LL++ KD+ + N+ ++++F AGT+T++ T+
Sbjct: 237 LDPSNPR-------DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLR 289
Query: 337 WAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLL 396
+ + K P ++VQ EI +IG ++ DD ++ Y AV+ E RL +P +
Sbjct: 290 YGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDLIPFGV 348
Query: 397 PREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFEL 456
P + GY IP T VF + DP ++ P F P F+D+ K +N
Sbjct: 349 PHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGF 407
Query: 457 IPFGAGRRICPGLNMGIVTVELAL--ANLLYKFDWEMPPGLKSHDFDVLP 504
+PF G+RIC L GI EL L +L F P + D D+ P
Sbjct: 408 MPFSLGKRIC--LGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLTP 453
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 225/470 (47%), Gaps = 27/470 (5%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K + + KLPPGP LP +GNL Q D SF L +KYG + ++ LG P +V+
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQ 162
+E L F R + + + G + F+ E WR +R+ + + + +
Sbjct: 63 DAIREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSLATMRDFGMGK 120
Query: 163 NFRPIREDEVSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSAR 221
R E +R ++E++ KS A L++ + + S+TS IIC I FGKR+D +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGA--LLDNTLLFHSITSNIICSIVFGKRFDYKDPVFL- 177
Query: 222 SRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEH--- 278
R L ++ +L SF + F G++ F G +++ N QE++ F + +++H
Sbjct: 178 -RLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRAT 236
Query: 279 LDPNRTKSKLPQQEDIIDV-LLQIRKDRGF-KVDLTLDNIKAVLMNVFVAGTDTSAATVV 336
LDP+ + D IDV LL++ KD+ + N+ ++++F AGT+T++ T+
Sbjct: 237 LDPSNPR-------DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLR 289
Query: 337 WAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLL 396
+ + K P ++VQ EI +IG ++ DD ++ Y AV+ E RL +P +
Sbjct: 290 YGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDLIPFGV 348
Query: 397 PREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFEL 456
P + GY IP T VF + DP ++ P F P F+D+ K +N
Sbjct: 349 PHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGF 407
Query: 457 IPFGAGRRICPGLNMGIVTVELAL--ANLLYKFDWEMPPGLKSHDFDVLP 504
+PF G+RIC L GI EL L +L F P + D D+ P
Sbjct: 408 MPFSLGKRIC--LGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLTP 453
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 225/470 (47%), Gaps = 27/470 (5%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K + + KLPPGP LP +GNL Q D SF L +KYG + ++ LG P +V+
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQ 162
+E L F R + + + G + F+ E WR +R+ + + + +
Sbjct: 63 DAIREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSLATMRDFGMGK 120
Query: 163 NFRPIREDEVSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSAR 221
R E +R ++E++ KS A L++ + + S+TS IIC I FGKR+D +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGA--LLDNTLLFHSITSNIICSIVFGKRFDYKDPVFL- 177
Query: 222 SRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEH--- 278
R L ++ +L SF + F G++ F G +++ N QE++ F + +++H
Sbjct: 178 -RLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRAT 236
Query: 279 LDPNRTKSKLPQQEDIIDV-LLQIRKDRGF-KVDLTLDNIKAVLMNVFVAGTDTSAATVV 336
LDP+ + D IDV LL++ KD+ + N+ ++++F AGT+T++ T+
Sbjct: 237 LDPSNPR-------DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLR 289
Query: 337 WAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLL 396
+ + K P ++VQ EI +IG ++ DD ++ Y AV+ E RL +P +
Sbjct: 290 YGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDLIPFGV 348
Query: 397 PREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFEL 456
P + GY IP T VF + DP ++ P F P F+D+ K +N
Sbjct: 349 PHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGF 407
Query: 457 IPFGAGRRICPGLNMGIVTVELAL--ANLLYKFDWEMPPGLKSHDFDVLP 504
+PF G+RIC L GI EL L +L F P + D D+ P
Sbjct: 408 MPFSLGKRIC--LGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLTP 453
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 225/470 (47%), Gaps = 27/470 (5%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K + + KLPPGP LP +GNL Q D SF L +KYG + ++ LG P +V+
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQ 162
+E L F R + + + G + F+ E WR +R+ + + + +
Sbjct: 63 DAIREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSLATMRDFGMGK 120
Query: 163 NFRPIREDEVSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSAR 221
R E +R ++E++ KS A L++ + + S+TS IIC I FGKR+D +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGA--LLDNTLLFHSITSNIICSIVFGKRFDYKDPVFL- 177
Query: 222 SRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEH--- 278
R L ++ +L SF + F G++ F G +++ N QE++ F + +++H
Sbjct: 178 -RLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRAT 236
Query: 279 LDPNRTKSKLPQQEDIIDV-LLQIRKDRGF-KVDLTLDNIKAVLMNVFVAGTDTSAATVV 336
LDP+ + D IDV LL++ KD+ + N+ ++++F AGT+T++ T+
Sbjct: 237 LDPSNPR-------DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLR 289
Query: 337 WAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLL 396
+ + K P ++VQ EI +IG ++ DD ++ Y AV+ E RL +P +
Sbjct: 290 YGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDLIPFGV 348
Query: 397 PREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFEL 456
P + GY IP T VF + DP ++ P F P F+D+ K +N
Sbjct: 349 PHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGF 407
Query: 457 IPFGAGRRICPGLNMGIVTVELAL--ANLLYKFDWEMPPGLKSHDFDVLP 504
+PF G+RIC L GI EL L +L F P + D D+ P
Sbjct: 408 MPFSLGKRIC--LGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLTP 453
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 214/449 (47%), Gaps = 15/449 (3%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K+S KLPPGP LP IGN+ Q + S LSK YGP+ +L G P +V+
Sbjct: 4 KTSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGY 63
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQ 162
+ KE L +F R + + + G + FS + W+EIR+ ++ L N +
Sbjct: 64 EAVKEALIDLGEEFSGR-GIFPLAERANRGFGIVFS-NGKKWKEIRRFSLMTLRNFGMGK 121
Query: 163 NFRPIREDEVSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSAR 221
R E +R ++E++ K+ A+ + + ++ +IC I F KR+D +
Sbjct: 122 RSIEDRVQEEARCLVEELRKTKASP--CDPTFILGCAPCNVICSIIFHKRFDYKDQQFL- 178
Query: 222 SRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEHLDP 281
LNE + S ++ F ID F G +L N + + E + EH
Sbjct: 179 -NLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEH--- 234
Query: 282 NRTKSKLPQQEDIIDV-LLQIRKDRGFK-VDLTLDNIKAVLMNVFVAGTDTSAATVVWAM 339
+ + +D ID L+++ K++ + + T+++++ +++F AGT+T++ T+ +A+
Sbjct: 235 -QESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYAL 293
Query: 340 TYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPRE 399
L K+P KVQ EI +IG N+ +D + Y AVV E R +P LP
Sbjct: 294 LLLLKHPEVTAKVQEEIERVIGRNRSPCMQDR-SHMPYTDAVVHEVQRYIDLLPTSLPHA 352
Query: 400 AIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPF 459
Y IP T + ++ ++ D + + NPE F P F+D +FK + +PF
Sbjct: 353 VTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPF 411
Query: 460 GAGRRICPGLNMGIVTVELALANLLYKFD 488
AG+RIC G + + + L L ++L F+
Sbjct: 412 SAGKRICVGEALAGMELFLFLTSILQNFN 440
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 223/453 (49%), Gaps = 22/453 (4%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K + + KLPPGP P IGN+ Q D S + S+ YGP+ ++ LG P++V+
Sbjct: 3 KKTSSKGKLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGY 62
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQ 162
+ KE L +F R ++ +K+S GL +AFS + W+E+R+ ++ L N +
Sbjct: 63 EAVKEALVDLGEEFAGRGSVPILEKVS-KGLGIAFS-NAKTWKEMRRFSLMTLRNFGMGK 120
Query: 163 NFRPIREDEVSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYD-EDEATSA 220
R E +R ++E++ K+ A+ + + ++ +IC + F R+D +DE
Sbjct: 121 RSIEDRIQEEARCLVEELRKTNASP--CDPTFILGCAPCNVICSVIFHNRFDYKDEEF-- 176
Query: 221 RSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEH-- 278
+ L+E L + ++ Y F +D F G + L N + F E + EH
Sbjct: 177 -LKLMESLHENVELLGTPWLQVYNNFPALLDYFPGIHKTLLKNADYIKNFIMEKVKEHQK 235
Query: 279 -LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVW 337
LD N + D ID L I+ ++ ++ TL+++ + ++F AGT+T++ T+ +
Sbjct: 236 LLDVNNPR-------DFIDCFL-IKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRY 287
Query: 338 AMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
++ L K+P +VQ EI +IG ++ +D + Y AV+ E R +P LP
Sbjct: 288 SLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDR-SRMPYTDAVIHEIQRFIDLLPTNLP 346
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELI 457
+ Y IP T + + ++ D +A+ NP+ F P F+D +FK ++ +
Sbjct: 347 HAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FM 405
Query: 458 PFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PF AG+R+C G + + + L L ++L F +
Sbjct: 406 PFSAGKRMCVGEGLARMELFLFLTSILQNFKLQ 438
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 221/468 (47%), Gaps = 24/468 (5%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K + + KLPPGP LP IGNL Q ++ SF L++++GP+ +L +G +V+
Sbjct: 3 KKTSSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGY 62
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQ 162
K KE L + +F R L G+ P W++IR+ + L N +
Sbjct: 63 KAVKEALLDYKDEFSGRGDLPAFHAHRDRGIIFNNGP---TWKDIRRFSLTTLRNYGMGK 119
Query: 163 NFRPIR-EDEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSAR 221
R + E ++E + K+ + + + ++ +I I F K +D ++ R
Sbjct: 120 QGNESRIQREAHFLLEALRKT--QGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFLR 177
Query: 222 SRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEH--- 278
+ L NE L + ++ Y F ++ G +++ N E+ + E + EH
Sbjct: 178 LMY--LFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQS 235
Query: 279 LDPNRTKSKLPQQEDIIDVLL-QIRKDRGFKVDL-TLDNIKAVLMNVFVAGTDTSAATVV 336
LDPN + D+ D LL ++ K++ L T+D I + ++F AGT+T++ T+
Sbjct: 236 LDPNCPR-------DLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLR 288
Query: 337 WAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLL 396
+ + L K P +K+ EI +IG ++ D QE+ Y+ AVV E R VP L
Sbjct: 289 YGLLILMKYPEIEEKLHEEIDRVIGPSR-IPAIKDRQEMPYMDAVVHEIQRFITLVPSNL 347
Query: 397 PREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFEL 456
P EA + I GY IP T V ++ D + + +PE+F PE F++ FK ++
Sbjct: 348 PHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY-F 406
Query: 457 IPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLKSHDFDVLP 504
PF G+R+C G + + + L L +L F+ + P + D D+ P
Sbjct: 407 KPFSTGKRVCAGEGLARMELFLLLCAILQHFNLK--PLVDPKDIDLSP 452
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 201/455 (44%), Gaps = 21/455 (4%)
Query: 52 PPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKT 111
PPGP P IGN + H+SF L+++YG + +RLG P +V++ + + L
Sbjct: 11 PPGPFAWPLIGNAAAVGQAA-HLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQ 69
Query: 112 HDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQ-NFRPIRE- 169
F RP+ + +S G +AF Y E+W+ R+ + N Q R + E
Sbjct: 70 QGSAFADRPSFASFRVVS-GGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEG 128
Query: 170 ---DEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQA 226
E ++ + + A ++ + + + ++ + FG RY D+ F+
Sbjct: 129 HVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDD-----PEFRE 183
Query: 227 LLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELI-DEHLDPNRTK 285
LL+ + + M W+ F ++ + F++L+R + I D+ L +
Sbjct: 184 LLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESL 243
Query: 286 SKLPQQEDIIDV-LLQIRK-----DRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAM 339
D++D +L K G L L+N+ A + ++F A DT + + W +
Sbjct: 244 RPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLL 303
Query: 340 TYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPRE 399
T+ P +VQ E+ ++G ++ D L Y+ A + E MR VP+ +P
Sbjct: 304 LLFTRYPDVQTRVQAELDQVVGRDR-LPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHA 362
Query: 400 AIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVD-SCIDFKGQNFELIP 458
V GY IP T VFVN W++ DP W NPE F P RF+D + K ++
Sbjct: 363 TTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMI 422
Query: 459 FGAGRRICPGLNMGIVTVELALANLLYKFDWEMPP 493
F G+R C G + + + L ++ L ++ D+ P
Sbjct: 423 FSVGKRRCIGEELSKMQLFLFISILAHQCDFRANP 457
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 210/440 (47%), Gaps = 15/440 (3%)
Query: 52 PPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKT 111
PPGP LP IGN+ Q + S LSK YGP+ +L G P +V+ + KE L
Sbjct: 11 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 112 HDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDE 171
+F R + + + G + FS + W+EIR+ ++ L N + R E
Sbjct: 71 LGEEFSGR-GIFPLAERANRGFGIVFS-NGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQE 128
Query: 172 VSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNE 230
+R ++E++ K+ A+ + + ++ +IC I F KR+D + LNE
Sbjct: 129 EARCLVEELRKTKASP--CDPTFILGCAPCNVICSIIFHKRFDYKDQQFL--NLMEKLNE 184
Query: 231 TQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQ 290
+ S ++ Y F +D F G +L N + + E + EH + +
Sbjct: 185 NIEILSSPWIQVYNNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKEH----QESMDMNN 240
Query: 291 QEDIIDV-LLQIRKDRGFK-VDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRA 348
+D ID L+++ K++ + + T+++++ +++F AGT+T++ T+ +A+ L K+P
Sbjct: 241 PQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEV 300
Query: 349 MKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEG 408
KVQ EI +IG N+ +D + Y AVV E R +P LP
Sbjct: 301 TAKVQEEIERVIGRNRSPCMQDR-SHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRN 359
Query: 409 YEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPG 468
Y IP T + ++ ++ D + + NPE F P F+D +FK + +PF AG+RIC G
Sbjct: 360 YLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVG 418
Query: 469 LNMGIVTVELALANLLYKFD 488
+ + + L L ++L F+
Sbjct: 419 EALAGMELFLFLTSILQNFN 438
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 224/489 (45%), Gaps = 33/489 (6%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K + + KLPPGP LP IGN+ Q DV SF SK YGP+ ++ G P +V
Sbjct: 3 KKTSSKGKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGY 62
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQ 162
+ KE L + +F R Q+++ GL + S + W+EIR+ + L N +
Sbjct: 63 EAVKEALIDNGEEFSGRGNSPISQRIT-KGLGI-ISSNGKRWKEIRRFSLTTLRNFGMGK 120
Query: 163 NFRPIR-EDEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEAT--S 219
R ++E ++E++ K+ A+ + + ++ +IC + F KR+D + +
Sbjct: 121 RSIEDRVQEEAHCLVEELRKTKASP--CDPTFILGCAPCNVICSVVFQKRFDYKDQNFLT 178
Query: 220 ARSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEH- 278
RF + ++ V + FP + ID F G ++ N + +E + EH
Sbjct: 179 LMKRFNENFRILNSPWIQ--VCNNFPLL--IDCFPGTHNKVLKNVALTRSYIREKVKEHQ 234
Query: 279 --LDPNRTKSKLPQQEDIIDVLL---QIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAA 333
LD N + D ID L + KD K + ++N+ + ++FVAGT+T++
Sbjct: 235 ASLDVNNPR-------DFIDCFLIKMEQEKDNQ-KSEFNIENLVGTVADLFVAGTETTST 286
Query: 334 TVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVP 393
T+ + + L K+P KVQ EI +IG ++ +D + Y AVV E R VP
Sbjct: 287 TLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDR-SHMPYTDAVVHEIQRYSDLVP 345
Query: 394 LLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQN 453
+P Y IP T + ++ D + + NP F P F+D +FK +
Sbjct: 346 TGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSD 405
Query: 454 FELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLKSHDFDVLPGLAMHKKNV 513
+ +PF AG+RIC G + + + L L +L F+ + LK+ + + K +
Sbjct: 406 Y-FMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKNLNTTAV------TKGI 458
Query: 514 LSLRAKYHV 522
+SL Y +
Sbjct: 459 VSLPPSYQI 467
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 210/449 (46%), Gaps = 15/449 (3%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K+S KLPPGP LP IGN+ Q D+ S LSK YGP+ +L G +V+
Sbjct: 4 KTSSGRGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGY 63
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQ 162
++ KE L +F R ++ + G + FS + W+EIR+ ++ L N +
Sbjct: 64 EVVKEALIDLGEEFSGRGHFPLAERAN-RGFGIVFS-NGKRWKEIRRFSLMTLRNFGMGK 121
Query: 163 NFRPIREDEVSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSAR 221
R E +R ++E++ K+ A+ + + ++ +IC I F KR+D +
Sbjct: 122 RSIEDRVQEEARCLVEELRKTKASP--CDPTFILGCAPCNVICSIIFQKRFDYKDQQFL- 178
Query: 222 SRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEHLDP 281
LNE + + ++ F ID F G +L N ++ E + EH
Sbjct: 179 -NLMEKLNENIRIVSTPWIQICNNFPTIIDYFPGTHNKLLKNLAFMESDILEKVKEH--- 234
Query: 282 NRTKSKLPQQEDIIDV-LLQIRKDR-GFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAM 339
+ + D ID L+++ K++ + + T++N+ ++ AGT+T++ T+ +A+
Sbjct: 235 -QESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYAL 293
Query: 340 TYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPRE 399
L K+P KVQ EI ++G N+ +D + Y AVV E R +P LP
Sbjct: 294 LLLLKHPEVTAKVQEEIERVVGRNRSPCMQDR-GHMPYTDAVVHEVQRYIDLIPTSLPHA 352
Query: 400 AIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPF 459
Y IP T + + ++ D + + NPE F P F+D +FK N+ +PF
Sbjct: 353 VTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY-FMPF 411
Query: 460 GAGRRICPGLNMGIVTVELALANLLYKFD 488
AG+RIC G + + + L L +L F+
Sbjct: 412 SAGKRICVGEGLARMELFLFLTFILQNFN 440
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 225/490 (45%), Gaps = 39/490 (7%)
Query: 50 KLPPGPRGLPFIGNLHQFDVSK-PHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEI 108
K PP P G P +G H + K PH++ +S++YG ++ +R+G P LV+S ++
Sbjct: 16 KSPPEPWGWPLLG--HVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQA 73
Query: 109 LKTHDLQFCSRPALVGQQKLSYNGLDLAFSP-YDEYWREIRKICVIHL----LNSNKVQN 163
L F RP L L +G L FS W R++ L + S+ +
Sbjct: 74 LVRQGDDFKGRPDLY-TSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASS 132
Query: 164 FRPIREDEVSR----MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDE--DEA 217
E+ VS+ +I ++ + +A + ++ + +I + FG+ + E DE
Sbjct: 133 SSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEM 192
Query: 218 TSARSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDE 277
S + ET + S D+FP + ++ +QR + Q F Q+ + E
Sbjct: 193 LSLVKNTHEFV-ETAS---SGNPLDFFPILRYLP--NPALQRFKAFNQRFLWFLQKTVQE 246
Query: 278 H---LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTL---DNIKAVLMNVFVAGTDTS 331
H D N + DI L + K +G + L + I ++ ++F AG DT
Sbjct: 247 HYQDFDKNSVR-------DITGALFKHSK-KGPRASGNLIPQEKIVNLVNDIFGAGFDTV 298
Query: 332 AATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPT 391
+ W++ YL P +K+Q E+ ++IG + D +L YL+A + ET R
Sbjct: 299 TTAISWSLMYLVTKPEIQRKIQKELDTVIGRERR-PRLSDRPQLPYLEAFILETFRHSSF 357
Query: 392 VPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFV--DSCIDF 449
+P +P + + G+ IP K VFVN W + DPE W++P EF PERF+ D
Sbjct: 358 LPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAIN 417
Query: 450 KGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLKSHDFDVLPGLAMH 509
K + +++ FG G+R C G + + L LA LL + ++ +PPG+K D + GL M
Sbjct: 418 KPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKV-DLTPIYGLTMK 476
Query: 510 KKNVLSLRAK 519
++A+
Sbjct: 477 HARCEHVQAR 486
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 216/461 (46%), Gaps = 24/461 (5%)
Query: 44 SSKNNTKLPPGPRGLPFIGNLHQFDV-SKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
+ K K P LP +G+L H +F++L KKYGP+ S+R+G +++V
Sbjct: 2 AKKTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHH 61
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHL-LNSNKV 161
++AKE+L F RP + S N +AF+ +W+ R++ + L +
Sbjct: 62 QLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGD 121
Query: 162 QNFRPIREDEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSAR 221
Q I E+S + + ++ S +++S + + +I I F Y +
Sbjct: 122 QKLEKIICQEISTLCDMLATHNGQS--IDISFPVFVAVTNVISLICFNTSYKNGDP---- 175
Query: 222 SRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGK-MQRLQNNFQELDRFYQELIDEHLD 280
+ N + + + + W+ F K +++L+++ + +L+++ L+
Sbjct: 176 -ELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHV----KIRNDLLNKILE 230
Query: 281 PNRTKSKLPQQEDIIDVLLQIR--KDRGF-----KVDLTLDN-IKAVLMNVFVAGTDTSA 332
+ K + +++D L+Q + D G +L DN I + ++F AG +T+
Sbjct: 231 NYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTT 290
Query: 333 ATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTV 392
+ V W + +L NP+ KK+ EI +G ++ D L L+A ++E +RL+P
Sbjct: 291 SVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRT-PTISDRNRLLLLEATIREVLRLRPVA 349
Query: 393 PLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVD-SCIDFKG 451
P+L+P +A + + + T V +N WA+ + + W P++F PERF++ +
Sbjct: 350 PMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLIS 409
Query: 452 QNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMP 492
+ +PFGAG R C G + + L +A LL +FD E+P
Sbjct: 410 PSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVP 450
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 224/499 (44%), Gaps = 47/499 (9%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K + + KLPPGP LPFIGN Q + + + S ++S++YGP+ ++ LG +V+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKLS---YNGLDLAFSPYDEYWREIRKICVIHLLNSN 159
KE L +F R G+Q + G +AFS E +++R+ + L
Sbjct: 63 DAVKEALVDQAEEFSGR----GEQATFDWLFKGYGVAFS-NGERAKQLRRFSIATLRGFG 117
Query: 160 KVQNFRPIRE---DEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDE 216
+ R I E +E +I+ + + A+ ++ + + S +I I FG R+D ++
Sbjct: 118 VGK--RGIEERIQEEAGFLIDALRGTHGAN--IDPTFFLSRTVSNVISSIVFGDRFDYED 173
Query: 217 ATSARSRFQALLNETQALFVSFFVTD----YFPFMGWIDKFTGKMQRLQNNFQELDRFYQ 272
F +LL F F T Y F + G Q+ Q L+ F
Sbjct: 174 -----KEFLSLLRMMLGSF-QFTATSTGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIA 227
Query: 273 ELIDEH---LDPNRTKSKLPQQEDIIDVLLQIR---KDRGFKVDLTLDNIKAVLMNVFVA 326
+ ++ + LDPN + D ID L IR +++ + L N+ +N+F A
Sbjct: 228 KKVEHNQRTLDPNSPR-------DFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLNLFFA 279
Query: 327 GTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETM 386
GT+T + T+ + L K+P KV EI +IG N+ ED + + Y +AV+ E
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYTEAVIHEIQ 338
Query: 387 RLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSC 446
R +P+ L + + +P T VF ++ RDP + NP +F P+ F+D
Sbjct: 339 RFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKK 398
Query: 447 IDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLKSHDFDVLP-- 504
FK + +PF G+R C G + + + L ++ F ++ P K D DV P
Sbjct: 399 GQFKKSD-AFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPK--DIDVSPKH 455
Query: 505 -GLAMHKKN-VLSLRAKYH 521
G A +N +S ++H
Sbjct: 456 VGFATIPRNYTMSFLPRHH 474
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 211/449 (46%), Gaps = 35/449 (7%)
Query: 72 PHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTHDLQFCSRPALVGQQKLSYN 131
PHV + S+ YG + SL LG + ++V++ + KE L F RP L K++
Sbjct: 36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKM 95
Query: 132 GLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEVSRMIEKI-----SKSVAAS 186
G L S Y W + R++ V N + F ++ S+++E+ +
Sbjct: 96 G-GLLNSRYGRGWVDHRRLAV------NSFRYFGYGQKSFESKILEETKFFNDAIETYKG 148
Query: 187 KLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALL-----NETQALFVSFFVT 241
+ + +++ + S I I FG+R+ T + FQ ++ N A S F+
Sbjct: 149 RPFDFKQLITNAVSNITNLIIFGERF-----TYEDTDFQHMIELFSENVELAASASVFLY 203
Query: 242 DYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQQ--EDIIDVLL 299
+ FP++G + GK Q+L N + F LI E NR K +LPQ + +D +
Sbjct: 204 NAFPWIGILP--FGKHQQLFRNAAVVYDFLSRLI-EKASVNR-KPQLPQHFVDAYLDEMD 259
Query: 300 QIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSL 359
Q + D + +N+ + + +AGT+T+ + WA+ ++ P +VQ EI L
Sbjct: 260 QGKNDPS--STFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEI-DL 316
Query: 360 IGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFV 419
I G G + DD ++ Y +AV+ E +R VPL + + +V GY IP T V
Sbjct: 317 IMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVIT 376
Query: 420 NAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELA 479
N +++ D + W++PE F+PERF+DS F + L+PF GRR C G ++ + + L
Sbjct: 377 NLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMFLF 435
Query: 480 LANLLYKFDWEMPPGLKSHDFDVLPGLAM 508
LL +F P L D+ P L M
Sbjct: 436 FTALLQRFHLHFPHELVP---DLKPRLGM 461
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 211/449 (46%), Gaps = 35/449 (7%)
Query: 72 PHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTHDLQFCSRPALVGQQKLSYN 131
PHV + S+ YG + SL LG + ++V++ + KE L F RP L K++
Sbjct: 36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKM 95
Query: 132 GLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEVSRMIEKI-----SKSVAAS 186
G L S Y W + R++ V N + F ++ S+++E+ +
Sbjct: 96 G-GLLNSRYGRGWVDHRRLAV------NSFRYFGYGQKSFESKILEETKFFNDAIETYKG 148
Query: 187 KLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALL-----NETQALFVSFFVT 241
+ + +++ + S I I FG+R+ T + FQ ++ N A S F+
Sbjct: 149 RPFDFKQLITNAVSNITNLIIFGERF-----TYEDTDFQHMIELFSENVELAASASVFLY 203
Query: 242 DYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQQ--EDIIDVLL 299
+ FP++G + GK Q+L N + F LI E NR K +LPQ + +D +
Sbjct: 204 NAFPWIGILP--FGKHQQLFRNAAVVYDFLSRLI-EKASVNR-KPQLPQHFVDAYLDEMD 259
Query: 300 QIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSL 359
Q + D + +N+ + + +AGT+T+ + WA+ ++ P +VQ EI L
Sbjct: 260 QGKNDPS--STFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEI-DL 316
Query: 360 IGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFV 419
I G G + DD ++ Y +AV+ E +R VPL + + +V GY IP T V
Sbjct: 317 IMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVIT 376
Query: 420 NAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELA 479
N +++ D + W++PE F+PERF+DS F + L+PF GRR C G ++ + + L
Sbjct: 377 NLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMFLF 435
Query: 480 LANLLYKFDWEMPPGLKSHDFDVLPGLAM 508
LL +F P L D+ P L M
Sbjct: 436 FTALLQRFHLHFPHELVP---DLKPRLGM 461
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 225/499 (45%), Gaps = 47/499 (9%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K + + KLPPGP LPFIGN Q + + + S ++S++YGP+ ++ LG +V+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKL---SYNGLDLAFSPYDEYWREIRKICVIHLLNSN 159
+E L +F R G+Q + G + FS E +++R+ + L +
Sbjct: 63 DAVREALVDQAEEFSGR----GEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFG 117
Query: 160 KVQNFRPIRE---DEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDE 216
+ R I E +E +I+ + + A+ ++ + + S +I I FG R+D +
Sbjct: 118 VGK--RGIEERIQEEAGFLIDALRGTGGAN--IDPTFFLSRTVSNVISSIVFGDRFDYKD 173
Query: 217 ATSARSRFQALLNETQALFVSFFVTD----YFPFMGWIDKFTGKMQRLQNNFQELDRFYQ 272
F +LL +F F T Y F + G Q+ Q L+ F
Sbjct: 174 -----KEFLSLLRMMLGIF-QFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 273 ELIDEH---LDPNRTKSKLPQQEDIIDVLLQIR---KDRGFKVDLTLDNIKAVLMNVFVA 326
+ ++ + LDPN + D ID L IR +++ + L N+ +N+F+
Sbjct: 228 KKVEHNQRTLDPNSPR-------DFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLNLFIG 279
Query: 327 GTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETM 386
GT+T + T+ + L K+P KV EI +IG N+ ED + + Y++AV+ E
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHEIQ 338
Query: 387 RLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSC 446
R +P+ L R + + +P T V+ ++ RDP + NP++F P+ F++
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 447 IDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLKSHDFDVLP-- 504
FK + +PF G+R C G G+ +EL L ++ + D DV P
Sbjct: 399 GQFKKSD-AFVPFSIGKRNCFG--EGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKH 455
Query: 505 -GLAMHKKN-VLSLRAKYH 521
G A +N +S ++H
Sbjct: 456 VGFATIPRNYTMSFLPRHH 474
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 226/501 (45%), Gaps = 51/501 (10%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K + + KLPPGP LPFIGN Q + + + S ++S++YGP+ ++ LG +V+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKL---SYNGLDLAFSPYDEYWREIRKICVIHLLNSN 159
+E L +F R G+Q + G + FS E +++R+ + L +
Sbjct: 63 DAVREALVDQAEEFSGR----GEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFG 117
Query: 160 KVQNFRPIRE---DEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDE 216
+ R I E +E +I+ + + A+ ++ + + S +I I FG R+D +
Sbjct: 118 VGK--RGIEERIQEEAGFLIDALRGTGGAN--IDPTFFLSRTVSNVISSIVFGDRFDYKD 173
Query: 217 ATSARSRFQALLNETQALFVSFFVTD------YFPFMGWIDKFTGKMQRLQNNFQELDRF 270
F +LL + + SF T Y F + G Q+ Q L+ F
Sbjct: 174 -----KEFLSLL---RMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDF 225
Query: 271 YQELIDEH---LDPNRTKSKLPQQEDIIDVLLQIR---KDRGFKVDLTLDNIKAVLMNVF 324
+ ++ + LDPN + D ID L IR +++ + L N+ +N+F
Sbjct: 226 IAKKVEHNQRTLDPNSPR-------DFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLNLF 277
Query: 325 VAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKE 384
AGT+T + T+ + L K+P KV EI +IG N+ ED + + Y++AV+ E
Sbjct: 278 FAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHE 336
Query: 385 TMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVD 444
R +P+ L R + + +P T V+ ++ RDP + NP++F P+ F++
Sbjct: 337 IQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLN 396
Query: 445 SCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLKSHDFDVLP 504
FK + +PF G+R C G G+ +EL L ++ + D DV P
Sbjct: 397 EKGQFKKSD-AFVPFSIGKRNCFG--EGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSP 453
Query: 505 ---GLAMHKKN-VLSLRAKYH 521
G A +N +S ++H
Sbjct: 454 KHVGFATIPRNYTMSFLPRHH 474
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 198/438 (45%), Gaps = 25/438 (5%)
Query: 62 GNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTHDLQFCSRPA 121
G LH + P + L++K GP+ LRLG +V++S + +E + + F RP
Sbjct: 36 GFLHLLQPNLP-IHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQ 94
Query: 122 LVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEVSRMIEKISK 181
+ + +S D++ Y W+ +K+ LL + + P + E++
Sbjct: 95 IPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTR-SSMEPWVDQLTQEFCERMR- 152
Query: 182 SVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQALFVSFFVT 241
V A V + + LT +IIC + FG + ED A L +T + S +
Sbjct: 153 -VQAGAPVTIQKEFSLLTCSIICYLTFGNK--EDTLVHAFHDCVQDLMKTWDHW-SIQIL 208
Query: 242 DYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQQEDIIDVLLQ- 300
D PF+ + + RL+ + D ++++ L ++ Q D+ D +LQ
Sbjct: 209 DMVPFLRFFP--NPGLWRLKQAIENRD----HMVEKQLRRHKESMVAGQWRDMTDYMLQG 262
Query: 301 ---IRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIR 357
R + G L ++ ++++F+ GT+T+A+T+ WA+ +L +P +++Q E+
Sbjct: 263 VGRQRVEEG-PGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELD 321
Query: 358 SLIG--GNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKT 415
+G + V D L L A + E +RL+P VPL LP + + GY+IP
Sbjct: 322 RELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGM 381
Query: 416 RVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVT 475
V N D W+ P EF P+RF++ G N + FG G R+C G ++ +
Sbjct: 382 VVIPNLQGAHLDETVWEQPHEFRPDRFLEP-----GANPSALAFGCGARVCLGESLARLE 436
Query: 476 VELALANLLYKFDWEMPP 493
+ + LA LL F PP
Sbjct: 437 LFVVLARLLQAFTLLPPP 454
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 224/499 (44%), Gaps = 47/499 (9%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K + + KLPPGP LPFIGN Q + + + S ++S++YGP+ ++ LG +V+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKL---SYNGLDLAFSPYDEYWREIRKICVIHLLNSN 159
+E L +F R G+Q + G + FS E +++R+ + L +
Sbjct: 63 DAVREALVDQAEEFSGR----GEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFG 117
Query: 160 KVQNFRPIRE---DEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDE 216
+ R I E +E +I+ + + A+ ++ + + S +I I FG R+D +
Sbjct: 118 VGK--RGIEERIQEEAGFLIDALRGTGGAN--IDPTFFLSRTVSNVISSIVFGDRFDYKD 173
Query: 217 ATSARSRFQALLNETQALFVSFFVTD----YFPFMGWIDKFTGKMQRLQNNFQELDRFYQ 272
F +LL +F F T Y F + G Q+ Q L+ F
Sbjct: 174 -----KEFLSLLRMMLGIF-QFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 273 ELIDEH---LDPNRTKSKLPQQEDIIDVLLQIR---KDRGFKVDLTLDNIKAVLMNVFVA 326
+ ++ + LDPN + D ID L IR +++ + L N+ + +FV
Sbjct: 228 KKVEHNQRTLDPNSPR-------DFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLQLFVG 279
Query: 327 GTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETM 386
GT+T + T+ + L K+P KV EI +IG N+ ED + + Y++AV+ E
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHEIQ 338
Query: 387 RLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSC 446
R +P+ L R + + +P T V+ ++ RDP + NP++F P+ F++
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 447 IDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLKSHDFDVLP-- 504
FK + +PF G+R C G G+ +EL L ++ + D DV P
Sbjct: 399 GQFKKSD-AFVPFSIGKRNCFG--EGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKH 455
Query: 505 -GLAMHKKN-VLSLRAKYH 521
G A +N +S ++H
Sbjct: 456 VGFATIPRNYTMSFLPRHH 474
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 208/453 (45%), Gaps = 33/453 (7%)
Query: 63 NLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTHDLQFCSRPAL 122
NL Q D SF +KYG + ++ LG P +++ + +E L F R +
Sbjct: 23 NLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKI 82
Query: 123 VGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIRE---DEVSRMIEKI 179
+ G + F+ + W+ +R+ V + + + R + E +E +IE++
Sbjct: 83 AMVDPF-FRGYGVIFANGNR-WKVLRRFSVTTMRDFGMGK--RSVEERIQEEAQCLIEEL 138
Query: 180 SKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLN---ETQALFV 236
KS A L++ + + S+T+ IIC I FGKR+ + F +LN +T +L
Sbjct: 139 RKSKGA--LMDPTFLFQSITANIICSIVFGKRFHYQD-----QEFLKMLNLFYQTFSLIS 191
Query: 237 SFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEH---LDPNRTKSKLPQQED 293
S F + F G++ F G +++ N QE++ + +++H LDP+ + D
Sbjct: 192 SVFGQLFELFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPR-------D 244
Query: 294 IIDV-LLQIRKDRG-FKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKK 351
+ID LL + K++ + + N+ +++F AGT+T++ T+ + + K P ++
Sbjct: 245 LIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAER 304
Query: 352 VQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEI 411
V EI +IG ++ D ++ Y +AV+ E R +P+ +P Q GY I
Sbjct: 305 VYREIEQVIGPHRP-PELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYII 363
Query: 412 PAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNM 471
P T VF+ DP ++ P+ F P+ F+D+ K IPF G+RIC G +
Sbjct: 364 PKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTE-AFIPFSLGKRICLGEGI 422
Query: 472 GIVTVELALANLLYKFDWEMPPGLKSHDFDVLP 504
+ L +L F P + D D+ P
Sbjct: 423 ARAELFLFFTTILQNFSMASP--VAPEDIDLTP 453
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 224/499 (44%), Gaps = 47/499 (9%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K + + KLPPGP LPFIGN Q + + + S ++S++YGP+ ++ LG +V+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKL---SYNGLDLAFSPYDEYWREIRKICVIHLLNSN 159
+E L +F R G+Q + G + FS E +++R+ + L +
Sbjct: 63 DAVREALVDQAEEFSGR----GEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFG 117
Query: 160 KVQNFRPIRE---DEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDE 216
+ R I E +E +I+ + + A+ ++ + + S +I I FG R+D +
Sbjct: 118 VGK--RGIEERIQEEAGFLIDALRGTGGAN--IDPTFFLSRTVSNVISSIVFGDRFDYKD 173
Query: 217 ATSARSRFQALLNETQALFVSFFVTD----YFPFMGWIDKFTGKMQRLQNNFQELDRFYQ 272
F +LL +F F T Y F + G Q+ Q L+ F
Sbjct: 174 -----KEFLSLLRMMLGIF-QFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIA 227
Query: 273 ELIDEH---LDPNRTKSKLPQQEDIIDVLLQIR---KDRGFKVDLTLDNIKAVLMNVFVA 326
+ ++ + LDPN + D ID L IR +++ + L N+ + +F+
Sbjct: 228 KKVEHNQRTLDPNSPR-------DFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLQLFIG 279
Query: 327 GTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETM 386
GT+T + T+ + L K+P KV EI +IG N+ ED + + Y++AV+ E
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHEIQ 338
Query: 387 RLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSC 446
R +P+ L R + + +P T V+ ++ RDP + NP++F P+ F++
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 447 IDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLKSHDFDVLP-- 504
FK + +PF G+R C G G+ +EL L ++ + D DV P
Sbjct: 399 GQFKKSD-AFVPFSIGKRNCFG--EGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKH 455
Query: 505 -GLAMHKKN-VLSLRAKYH 521
G A +N +S ++H
Sbjct: 456 VGFATIPRNYTMSFLPRHH 474
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 224/499 (44%), Gaps = 47/499 (9%)
Query: 43 KSSKNNTKLPPGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
K + + KLPPGP LPFIGN Q + + + S ++S++YGP+ ++ LG +V+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 103 KMAKEILKTHDLQFCSRPALVGQQKL---SYNGLDLAFSPYDEYWREIRKICVIHLLNSN 159
+E L +F R G+Q + G + FS E +++R+ + L +
Sbjct: 63 DAVREALVDQAEEFSGR----GEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFG 117
Query: 160 KVQNFRPIRE---DEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDE 216
+ R I E +E +I+ + + A+ ++ + + S +I I FG R+D +
Sbjct: 118 VGK--RGIEERIQEEAGFLIDALRGTGGAN--IDPTFFLSRTVSNVISSIVFGDRFDYKD 173
Query: 217 ATSARSRFQALLNETQALFVSFFVTD----YFPFMGWIDKFTGKMQRLQNNFQELDRFYQ 272
F +LL +F F T Y F + G Q+ Q L+ F
Sbjct: 174 -----KEFLSLLRMMLGIF-QFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 273 ELIDEH---LDPNRTKSKLPQQEDIIDVLLQIR---KDRGFKVDLTLDNIKAVLMNVFVA 326
+ ++ + LDPN + D ID L IR +++ + L N+ + +F+
Sbjct: 228 KKVEHNQRTLDPNSPR-------DFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLQLFIG 279
Query: 327 GTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETM 386
GT+T + T+ + L K+P KV EI +IG N+ ED + + Y++AV+ E
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHEIQ 338
Query: 387 RLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSC 446
R +P+ L R + + +P T V+ ++ RDP + NP++F P+ F++
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 447 IDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLKSHDFDVLP-- 504
FK + +PF G+R C G G+ +EL L ++ + D DV P
Sbjct: 399 GQFKKSD-AFVPFSIGKRNCFG--EGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKH 455
Query: 505 -GLAMHKKN-VLSLRAKYH 521
G A +N +S ++H
Sbjct: 456 VGFATIPRNYTMSFLPRHH 474
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 197/435 (45%), Gaps = 37/435 (8%)
Query: 76 FWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTHDLQFCSRPALVGQQKLSYN---- 131
F +L +++G + SL+L + P +V++ +E L TH RP + Q L +
Sbjct: 36 FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQ 95
Query: 132 GLDLAFSPYDEYWREIRKICVIHLLNSN-KVQNFRPIREDEVSRMIEKISKSVAASKLVN 190
G+ LA Y WRE R+ V L N ++ +E + + + + +
Sbjct: 96 GVFLAR--YGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANH--SGRPFR 151
Query: 191 LSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQALFV--SFF---VTDYFP 245
+ ++ S +I + G+R++ D+ RF LL+ Q S F V + P
Sbjct: 152 PNGLLDKAVSNVIASLTCGRRFEYDD-----PRFLRLLDLAQEGLKEESGFLREVLNAVP 206
Query: 246 FMGWIDKFTGKMQRLQNNF-QELDRFYQELIDEH---LDPNRTKSKLPQQEDIIDVLLQI 301
+ I GK+ R Q F +LD EL+ EH DP + L + L ++
Sbjct: 207 VLLHIPALAGKVLRFQKAFLTQLD----ELLTEHRMTWDPAQPPRDLTEA-----FLAEM 257
Query: 302 RKDRGF-KVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLI 360
K +G + +N++ V+ ++F AG T++ T+ W + + +P ++VQ EI +I
Sbjct: 258 EKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVI 317
Query: 361 GGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVN 420
G + D + Y AV+ E R VPL + + V+G+ IP T + N
Sbjct: 318 GQVRR-PEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITN 376
Query: 421 AWAIGRDPEAWQNPEEFYPERFVDSCIDF-KGQNFELIPFGAGRRICPGLNMGIVTVELA 479
++ +D W+ P F+PE F+D+ F K + F +PF AGRR C G + + + L
Sbjct: 377 LSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAF--LPFSAGRRACLGEPLARMELFLF 434
Query: 480 LANLLYKFDWEMPPG 494
+LL F + +P G
Sbjct: 435 FTSLLQHFSFSVPTG 449
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 196/435 (45%), Gaps = 37/435 (8%)
Query: 76 FWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTHDLQFCSRPALVGQQKLSYN---- 131
F +L +++G + SL+L + P +V++ +E L TH RP + Q L +
Sbjct: 36 FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQ 95
Query: 132 GLDLAFSPYDEYWREIRKICVIHLLNSN-KVQNFRPIREDEVSRMIEKISKSVAASKLVN 190
G+ LA Y WRE R+ V L N ++ +E + + + + +
Sbjct: 96 GVFLAR--YGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANH--SGRPFR 151
Query: 191 LSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQALFV--SFF---VTDYFP 245
+ ++ S +I + G+R++ D+ RF LL+ Q S F V + P
Sbjct: 152 PNGLLDKAVSNVIASLTCGRRFEYDD-----PRFLRLLDLAQEGLKEESGFLREVLNAVP 206
Query: 246 FMGWIDKFTGKMQRLQNNF-QELDRFYQELIDEH---LDPNRTKSKLPQQEDIIDVLLQI 301
I GK+ R Q F +LD EL+ EH DP + L + L ++
Sbjct: 207 VDRHIPALAGKVLRFQKAFLTQLD----ELLTEHRMTWDPAQPPRDLTEA-----FLAEM 257
Query: 302 RKDRGF-KVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLI 360
K +G + +N++ V+ ++F AG T++ T+ W + + +P ++VQ EI +I
Sbjct: 258 EKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVI 317
Query: 361 GGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVN 420
G + D + Y AV+ E R VPL + + V+G+ IP T + N
Sbjct: 318 GQVRR-PEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITN 376
Query: 421 AWAIGRDPEAWQNPEEFYPERFVDSCIDF-KGQNFELIPFGAGRRICPGLNMGIVTVELA 479
++ +D W+ P F+PE F+D+ F K + F +PF AGRR C G + + + L
Sbjct: 377 LSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAF--LPFSAGRRACLGEPLARMELFLF 434
Query: 480 LANLLYKFDWEMPPG 494
+LL F + +P G
Sbjct: 435 FTSLLQHFSFSVPTG 449
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 200/452 (44%), Gaps = 38/452 (8%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSF----WELSKKYGPLMSLRLGFVPSLVVSSAKMAKEI 108
PGP LPF+GN+ + H F E KKYG + G P L ++ M K +
Sbjct: 19 PGPTPLPFLGNILSY-----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTV 73
Query: 109 LKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIR 168
L + G + + +A DE W+ +R + + S K++ PI
Sbjct: 74 LVKECYSVFTNRRPFGPVGFMKSAISIA---EDEEWKRLRSL-LSPTFTSGKLKEMVPII 129
Query: 169 EDEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYD-----ED---EATSA 220
++ + + K V L +V + + +I FG D +D E T
Sbjct: 130 AQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKK 189
Query: 221 RSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEHLD 280
RF L F+S V FPF+ I ++ + +E+ F ++ + + +
Sbjct: 190 LLRFDFL----DPFFLSITV---FPFLIPI----LEVLNICVFPREVTNFLRKSV-KRMK 237
Query: 281 PNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFV--AGTDTSAATVVWA 338
+R + + D + +++ + + + L +++ V ++ AG +T+++ + +
Sbjct: 238 ESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFI 297
Query: 339 MTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPR 398
M L +P +K+Q EI +++ NK D V ++ YL VV ET+RL P + + L R
Sbjct: 298 MYELATHPDVQQKLQEEIDAVLP-NKAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLER 355
Query: 399 EAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIP 458
+ + G IP V + ++A+ RDP+ W PE+F PERF D + P
Sbjct: 356 VCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTP 414
Query: 459 FGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
FG+G R C G+ ++ ++LAL +L F ++
Sbjct: 415 FGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 446
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 200/452 (44%), Gaps = 38/452 (8%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSF----WELSKKYGPLMSLRLGFVPSLVVSSAKMAKEI 108
PGP LPF+GN+ + H F E KKYG + G P L ++ M K +
Sbjct: 17 PGPTPLPFLGNILSY-----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTV 71
Query: 109 LKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIR 168
L + G + + +A DE W+ +R + + S K++ PI
Sbjct: 72 LVKECYSVFTNRRPFGPVGFMKSAISIA---EDEEWKRLRSL-LSPTFTSGKLKEMVPII 127
Query: 169 EDEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYD-----ED---EATSA 220
++ + + K V L +V + + +I FG D +D E T
Sbjct: 128 AQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKK 187
Query: 221 RSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEHLD 280
RF L F+S V FPF+ I ++ + +E+ F ++ + + +
Sbjct: 188 LLRFDFL----DPFFLSITV---FPFLIPI----LEVLNICVFPREVTNFLRKSV-KRMK 235
Query: 281 PNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFV--AGTDTSAATVVWA 338
+R + + D + +++ + + + L +++ V ++ AG +T+++ + +
Sbjct: 236 ESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFI 295
Query: 339 MTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPR 398
M L +P +K+Q EI +++ NK D V ++ YL VV ET+RL P + + L R
Sbjct: 296 MYELATHPDVQQKLQEEIDAVLP-NKAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLER 353
Query: 399 EAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIP 458
+ + G IP V + ++A+ RDP+ W PE+F PERF D + P
Sbjct: 354 VCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTP 412
Query: 459 FGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
FG+G R C G+ ++ ++LAL +L F ++
Sbjct: 413 FGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 444
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 200/452 (44%), Gaps = 38/452 (8%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSF----WELSKKYGPLMSLRLGFVPSLVVSSAKMAKEI 108
PGP LPF+GN+ + H F E KKYG + G P L ++ M K +
Sbjct: 18 PGPTPLPFLGNILSY-----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTV 72
Query: 109 LKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIR 168
L + G + + +A DE W+ +R + + S K++ PI
Sbjct: 73 LVKECYSVFTNRRPFGPVGFMKSAISIA---EDEEWKRLRSL-LSPTFTSGKLKEMVPII 128
Query: 169 EDEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYD-----ED---EATSA 220
++ + + K V L +V + + +I FG D +D E T
Sbjct: 129 AQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKK 188
Query: 221 RSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEHLD 280
RF L F+S V FPF+ I ++ + +E+ F ++ + + +
Sbjct: 189 LLRFDFL----DPFFLSITV---FPFLIPI----LEVLNICVFPREVTNFLRKSV-KRMK 236
Query: 281 PNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFV--AGTDTSAATVVWA 338
+R + + D + +++ + + + L +++ V ++ AG +T+++ + +
Sbjct: 237 ESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFI 296
Query: 339 MTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPR 398
M L +P +K+Q EI +++ NK D V ++ YL VV ET+RL P + + L R
Sbjct: 297 MYELATHPDVQQKLQEEIDAVLP-NKAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLER 354
Query: 399 EAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIP 458
+ + G IP V + ++A+ RDP+ W PE+F PERF D + P
Sbjct: 355 VCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTP 413
Query: 459 FGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
FG+G R C G+ ++ ++LAL +L F ++
Sbjct: 414 FGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 445
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 199/465 (42%), Gaps = 53/465 (11%)
Query: 57 GLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTHDLQF 116
G+P +G H + +++ ++F + +G ++ ++LG V++ ++ + D
Sbjct: 30 GVPLLG--HGWRLARDPLAFMSQLRDHGDVVRIKLGPKTVYAVTNPELTGALALNPDYHI 87
Query: 117 CSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEVSRMI 176
+ L G+ A P + R+ R I L++ + + PI E+E +
Sbjct: 88 AGPLWESLEGLLGKEGVATANGPL--HRRQRRTIQPAFRLDA--IPAYGPIMEEEAHALT 143
Query: 177 EKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQALFV 236
E+ V + + + + R G+ DE R + L +F
Sbjct: 144 ERWQPGKTVDATSESFRVAVRVAARCLLR---GQYMDE--------RAERLCVALATVFR 192
Query: 237 SFFVTDYFPFMGWIDKFTGKMQRL----QNNFQELDRFYQELIDEHLDPNRTKSKLPQQE 292
+ P G + RL F + L+DE + R + P +
Sbjct: 193 GMYRRMVVPL--------GPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKP--D 242
Query: 293 DIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKV 352
D++ LL+ + D G + I ++ + G++T A+T++W + L +P ++
Sbjct: 243 DLLTALLEAKDDNGDPIGE--QEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRI 300
Query: 353 QLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIP 412
+ E+ ++ GG V +DV++L + V+ E MRL+P V +L R A+ + + GY IP
Sbjct: 301 RDEVEAVTGGRP--VAFEDVRKLRHTGNVIVEAMRLRPAV-WVLTRRAVAESELGGYRIP 357
Query: 413 AKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQN---FELIPFGAGRRICPGL 469
A + + +AI RDP+++ + EF P+R++ + N + + PF AG+R CP
Sbjct: 358 AGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPE----RAANVPKYAMKPFSAGKRKCPSD 413
Query: 470 NMGIVTVELALANLLYKFDWEMPPG----------LKSHDFDVLP 504
+ + + L A L K+ +E G L+ HD V P
Sbjct: 414 HFSMAQLTLITAALATKYRFEQVAGSNDAVRVGITLRPHDLLVRP 458
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 208/459 (45%), Gaps = 41/459 (8%)
Query: 45 SKNNTKLPPGPRGLPFIGNLHQF----DVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVS 100
++N T LP GP P +G+L + + K H + E KKYG + ++LG S+ +
Sbjct: 20 TRNVTDLP-GPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLG 78
Query: 101 SAKMAKEILKT---HDLQFCSRP--ALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHL 155
S + + + +T H + +P A + +Y + L + W+ +R L
Sbjct: 79 SPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILE----GQEWQRVRSAFQKKL 134
Query: 156 LNSNKVQNFRPIREDEVSRMIEKISKSV-AASKLVNLSEVMMSLTSTIICRIGFGKRYDE 214
+ ++ + ++ +E++ + ++ +L + + IC + + KR+
Sbjct: 135 MKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRF-- 192
Query: 215 DEATSARSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQEL 274
Q E F++ T F + +RL + +
Sbjct: 193 -------GLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDT 245
Query: 275 IDEHLDP---NRTK--SKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTD 329
I + + P NR + S+ P + + D+ Q L+ + A + + +A +
Sbjct: 246 IFKSVKPCIDNRLQRYSQQPGADFLCDIYQQDH--------LSKKELYAAVTELQLAAVE 297
Query: 330 TSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQ 389
T+A +++W + L++NP+A +++ E++S++ N+ +D++ + YLKA +KE+MRL
Sbjct: 298 TTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQT-PRAEDLRNMPYLKACLKESMRLT 356
Query: 390 PTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDF 449
P+VP R + ++ Y +P T + +N +G + +++ +F PER++ +
Sbjct: 357 PSVPFTT-RTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQK--EK 413
Query: 450 KGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFD 488
K F +PFG G+R+C G + + + LAL ++ K+D
Sbjct: 414 KINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYD 452
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 9/230 (3%)
Query: 263 NFQELDRFYQELIDEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVD--LTLDNIKAVL 320
+F+ DR ++E+ D + K Q ++ ID +LQ D +K LT D + +L
Sbjct: 201 SFRRRDRAHREIKDIFY---KAIQKRRQSQEKIDDILQTLLDATYKDGRPLTDDEVAGML 257
Query: 321 MNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKA 380
+ + +AG TS+ T W +L ++ KK LE +++ G N + D +++L+ L
Sbjct: 258 IGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDR 317
Query: 381 VVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPE 440
+KET+RL+P + +++ R A V GY IP +V V+ R ++W +F P+
Sbjct: 318 CIKETLRLRPPI-MIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPD 376
Query: 441 RFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANL--LYKFD 488
R++ G+ F +PFGAGR C G N V ++ + + LY+FD
Sbjct: 377 RYLQDN-PASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFD 425
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 201/444 (45%), Gaps = 38/444 (8%)
Query: 80 SKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTHDLQFCSR-PALVGQQKLSYNGLDLAFS 138
++ YG M + + +L++S + I+K + + SR + +G Q + + + F+
Sbjct: 78 NRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGSKLGLQCIGMHEKGIIFN 135
Query: 139 PYDEYWREIRKICVIHLLNSNKVQNFRPIRED---EVSRMIEKISKSVAASKLVNLSEVM 195
E W+ R + L V+ E + R+ E ++S L L VM
Sbjct: 136 NNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVM 195
Query: 196 MSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTG 255
+ ++T+ RI + ++ + Q + QAL + D F + W+ K
Sbjct: 196 LDTSNTLFLRIPL-------DESAIVVKIQGYFDAWQALLIK---PDIFFKISWLYK--- 242
Query: 256 KMQRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDN 315
+ + + ++L + LI E T+ KL + D L+ K RG DLT +N
Sbjct: 243 ---KYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEK-RG---DLTREN 295
Query: 316 IKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQEL 375
+ ++ + +A DT + ++ + + + K+P + + EI+++IG + DD+Q+L
Sbjct: 296 VNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD--IKIDDIQKL 353
Query: 376 HYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPE 435
++ + E+MR QP V L++ R+A++ +++GY + T + +N + R E + P
Sbjct: 354 KVMENFIYESMRYQPVVDLVM-RKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPN 411
Query: 436 EFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGL 495
EF E F + + F+ PFG G R C G + +V ++ L LL +F + G
Sbjct: 412 EFTLENFAK---NVPYRYFQ--PFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQ 466
Query: 496 KSHDFDVLPGLAMH---KKNVLSL 516
+ L++H KN+L +
Sbjct: 467 CVESIQKIHDLSLHPDETKNMLEM 490
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 200/430 (46%), Gaps = 39/430 (9%)
Query: 76 FWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKT----HDLQFCSRPALVGQQKLSYN 131
F + +KKYGP++ + + S++V+S + K+ L + D + V ++L
Sbjct: 16 FLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQ 75
Query: 132 GLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEVSRMIEKISKSVAASKLVNL 191
GL ++ Y E W + R++ + S+ V E + +++E + V++
Sbjct: 76 GL-VSECNY-ERWHKQRRVIDLAFSRSSLVSLMETFNE-KAEQLVEILEAKADGQTPVSM 132
Query: 192 SEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQALFVSFFVTDYFPFMGWID 251
+++ I+ + FG TS Q L++ L + ++
Sbjct: 133 QDMLTYTAMDILAKAAFGME------TSMLLGAQKPLSQAVKLMLEGITASRNTLAKFL- 185
Query: 252 KFTGKMQRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQQEDI-IDVLLQIRK-DRGFKV 309
GK ++L+ +E RF +++ + + R + L + E++ D+L QI K + G +
Sbjct: 186 --PGKRKQLRE-VRESIRFLRQVGRDWV--QRRREALKRGEEVPADILTQILKAEEGAQD 240
Query: 310 DLTL-DNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVN 368
D L DN + F+AG +TSA + + + L++ P + ++Q E+ +I G+K +++
Sbjct: 241 DEGLLDN----FVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVI-GSKRYLD 295
Query: 369 EDDVQELHYLKAVVKETMRLQP----TVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAI 424
+D+ L YL V+KE++RL P T LL ++ +++G +P T + + + +
Sbjct: 296 FEDLGRLQYLSQVLKESLRLYPPAWGTFRLL-----EEETLIDGVRVPGNTPLLFSTYVM 350
Query: 425 GRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLL 484
GR +++P F P+RF F PF G R C G + V++ +A LL
Sbjct: 351 GRMDTYFEDPLTFNPDRFGPGA---PKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLL 407
Query: 485 YKFDWEMPPG 494
+ ++ + PG
Sbjct: 408 QRLEFRLVPG 417
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 210/474 (44%), Gaps = 55/474 (11%)
Query: 43 KSSKNNTKLP-PGPRGLPFIGNLHQF----DVSKPHVSFWELSKKYGPLMSLRLGFVPSL 97
K+ + +++P PG G NL+ F + H E +KYGP+ +LG + S+
Sbjct: 5 KTPRPYSEIPSPGDNGW---LNLYHFWREKGSQRIHFRHIENFQKYGPIYREKLGNLESV 61
Query: 98 VVSSAKMAKEILKTHDLQFCSR---PALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIH 154
+ + + K + + R P + + + + F W++ R +
Sbjct: 62 YIIHPEDVAHLFK-FEGSYPERYDIPPWLAYHRYYQKPIGVLFKKSGT-WKKDRVVLNTE 119
Query: 155 LLNSNKVQNF----RPIREDEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGK 210
++ ++NF P+ +D VS + ++I + + + ++ E + I + FG+
Sbjct: 120 VMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFGE 179
Query: 211 RYDEDEAT---SARSRFQA----------LLNETQALFVSFFVTDYFPFMGWIDKFTGKM 257
R E T A+ A LLN L+ F + + D K
Sbjct: 180 RLGMLEETVNPEAQKFIDAVYKMFHTSVPLLNVPPELYRLFRTKTWRDHVAAWDTIFNKA 239
Query: 258 QRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIK 317
++ + E+ FYQ+L R K++ I+ LL+ K + L+++K
Sbjct: 240 EK----YTEI--FYQDL--------RRKTEFRNYPGILYCLLKSEK-------MLLEDVK 278
Query: 318 AVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHY 377
A + + G +T++ T+ W + + ++ + ++ E+ + +G +++ +Q +
Sbjct: 279 ANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKM-LQMVPL 337
Query: 378 LKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEF 437
LKA +KET+RL P + + L R +++ Y IPAKT V V +A+GRDP + +P++F
Sbjct: 338 LKASIKETLRLHP-ISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKF 396
Query: 438 YPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEM 491
P R++ D +F + FG G R C G + + + L L ++L F EM
Sbjct: 397 DPTRWLSKDKDLI--HFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEM 448
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 189/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 66
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 67 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 124
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 125 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 164
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 165 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 220
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 221 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 277
Query: 339 MTYLTKNPRAMKKVQLEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 278 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 334
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 335 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 390
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R CPG + L L +L FD+E
Sbjct: 391 FKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 191/456 (41%), Gaps = 56/456 (12%)
Query: 63 NLHQF----DVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKT---HDLQ 115
NL+ F K H+ + +KYGP+ +LG V S+ V + + K+ + +
Sbjct: 18 NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPER 77
Query: 116 FCSRPALVGQQKLSYN-GLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRP----IRED 170
F P + Q G+ L S W++ R ++ +NF P + D
Sbjct: 78 FLIPPWVAYHQYYQRPIGVLLKKS---AAWKKDRVALNQEVMAPEATKNFLPLLDAVSRD 134
Query: 171 EVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYD--EDEATSARSRF---- 224
VS + +I K+ + + ++S+ + I + FG+R E+ RF
Sbjct: 135 FVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAI 194
Query: 225 -------QALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDE 277
+LN LF F + + D K NF Y EL
Sbjct: 195 YQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNF------YWEL--- 245
Query: 278 HLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVW 337
+ K D +L ++ D ++ ++IKA + + G DT++ T+ W
Sbjct: 246 -------RQKGSVHHDYRGILYRLLGDS----KMSFEDIKANVTEMLAGGVDTTSMTLQW 294
Query: 338 AMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ + +N + ++ E+ + +G + +Q + LKA +KET+RL P + + L
Sbjct: 295 HLYEMARNLKVQDMLRAEVLAARHQAQGDM-ATMLQLVPLLKASIKETLRLHP-ISVTLQ 352
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFV--DSCIDFKGQNFE 455
R + ++ Y IPAKT V V +A+GR+P + +PE F P R++ D I + F
Sbjct: 353 RYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITY----FR 408
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEM 491
+ FG G R C G + + + + L N+L F E+
Sbjct: 409 NLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEI 444
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFARDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEYIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFM----GWIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFIISMIRALDEVMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L NI ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTQMLN-GKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++KV E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKVAEEATRVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW-QNPEEFYPERFVD-SCIDFKGQNFE 455
+ Y + V V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 182/440 (41%), Gaps = 56/440 (12%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLG---FVPSLVVSSAKMAKEIL 109
PG R L + + H+ + ++ GP+ LG V ++ + +++
Sbjct: 19 PGNRWLRLLQIWREQGYEHLHLEMHQTFQELGPIFRYNLGGPRMVCVMLPEDVEKLQQVD 78
Query: 110 KTHDLQFCSRPALVGQQKLSYN-GLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIR 168
H + P + +Q + G+ L P WR R +L+ VQ F P+
Sbjct: 79 SLHPCRMILEPWVAYRQHRGHKCGVFLLNGPE---WRFNRLRLNPDVLSPKAVQRFLPM- 134
Query: 169 EDEVSR-----MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSR 223
D V+R + +K+ ++ S +++ + T FG+R S
Sbjct: 135 VDAVARDFSQALKKKVLQNARGSLTLDVQPSIFHYTIEASNLALFGERL----GLVGHSP 190
Query: 224 FQALLNETQALFVSFFVTDYFPFMG-----WIDKFTGKMQRLQNNFQELDRFYQ------ 272
A LN AL V F T FM WI K +F+ D +Q
Sbjct: 191 SSASLNFLHALEVMFKSTVQLMFMPRSLSRWISPKVWK-----EHFEAWDCIFQYGDNCI 245
Query: 273 ELIDEHLDPNRTKSKLPQQ-EDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTS 331
+ I + L NR PQ I+ LL K +L+L+ IKA M + DT+
Sbjct: 246 QKIYQELAFNR-----PQHYTGIVAELL-------LKAELSLEAIKANSMELTAGSVDTT 293
Query: 332 AATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDD---VQELHYLKAVVKETMRL 388
A ++ + L +NP VQ +R ++E EL L+A +KET+RL
Sbjct: 294 AFPLLMTLFELARNP----DVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLRL 349
Query: 389 QPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCID 448
P V L L R +++ Y IPA T V V +++GR+ + PE + P+R++D I
Sbjct: 350 YP-VGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLD--IR 406
Query: 449 FKGQNFELIPFGAGRRICPG 468
G+NF +PFG G R C G
Sbjct: 407 GSGRNFHHVPFGFGMRQCLG 426
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 191/456 (41%), Gaps = 56/456 (12%)
Query: 63 NLHQF----DVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKT---HDLQ 115
NL+ F K H+ + +KYGP+ +LG V S+ V + + K+ + +
Sbjct: 21 NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPER 80
Query: 116 FCSRPALVGQQKLSYN-GLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRP----IRED 170
F P + Q G+ L S W++ R ++ +NF P + D
Sbjct: 81 FLIPPWVAYHQYYQRPIGVLLKKS---AAWKKDRVALNQEVMAPEATKNFLPLLDAVSRD 137
Query: 171 EVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYD--EDEATSARSRF---- 224
VS + +I K+ + + ++S+ + I + FG+R E+ RF
Sbjct: 138 FVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAI 197
Query: 225 -------QALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDE 277
+LN LF F + + D K NF Y EL
Sbjct: 198 YQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNF------YWEL--- 248
Query: 278 HLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVW 337
+ K D +L ++ D ++ ++IKA + + G DT++ T+ W
Sbjct: 249 -------RQKGSVHHDYRGILYRLLGDS----KMSFEDIKANVTEMLAGGVDTTSMTLQW 297
Query: 338 AMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ + +N + ++ E+ + +G + +Q + LKA +KET+RL P + + L
Sbjct: 298 HLYEMARNLKVQDMLRAEVLAARHQAQGDM-ATMLQLVPLLKASIKETLRLHP-ISVTLQ 355
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFV--DSCIDFKGQNFE 455
R + ++ Y IPAKT V V +A+GR+P + +PE F P R++ D I + F
Sbjct: 356 RYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITY----FR 411
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEM 491
+ FG G R C G + + + + L N+L F E+
Sbjct: 412 NLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEI 447
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 189/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 9 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 68
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 69 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 126
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 127 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 166
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 167 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 222
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 223 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 279
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PTVP
Sbjct: 280 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTVPAFSL 336
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 337 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 392
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 393 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYISSQRLVKEACDES 66
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
A + + +GL +++ +++ W++ R I ++ L+ ++ + + D
Sbjct: 67 RFDKNLSQARKFVRDFAGDGLATSWT-HEKNWKKARNI-LLPRLSQQAMKGYHAMMVDIA 124
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + + + + + E M LT I GF R +
Sbjct: 125 VQLVQKWER-LNSDEHIEVPEDMTRLTLDTIGLCGFNYRIN------------------- 164
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 165 ----SFYRDQPHPFITSMVRALDEVMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 220
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 221 IADRKASGE--QSDDLLTHMLH-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFA 277
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +R+ PT P
Sbjct: 278 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRIWPTAPAFSL 334
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 335 YAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAI----PQHA 390
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 5/203 (2%)
Query: 293 DIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKV 352
D++DVL+ ++ + G + D I + +++ AG TS+ T W + L ++ A V
Sbjct: 224 DMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 353 QLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIP 412
E+ L G + V+ ++++ L+ V+KET+RL P + +L+ R A + V+G+ I
Sbjct: 283 IDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIH 340
Query: 413 AKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMG 472
V + R PE + +P +F P R+ + + IPFGAGR C G
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFA 400
Query: 473 IVTVELALANLLYKFDWEM--PP 493
I+ ++ + LL ++++EM PP
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPP 423
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 5/203 (2%)
Query: 293 DIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKV 352
D++DVL+ ++ + G + D I + +++ AG TS+ T W + L ++ A V
Sbjct: 224 DMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 353 QLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIP 412
E+ L G + V+ ++++ L+ V+KET+RL P + +L+ R A + V+G+ I
Sbjct: 283 IDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIH 340
Query: 413 AKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMG 472
V + R PE + +P +F P R+ + + IPFGAGR C G
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFA 400
Query: 473 IVTVELALANLLYKFDWEM--PP 493
I+ ++ + LL ++++EM PP
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPP 423
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 5/203 (2%)
Query: 293 DIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKV 352
D++DVL+ ++ + G + D I + +++ AG TS+ T W + L ++ A V
Sbjct: 224 DMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 353 QLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIP 412
E+ L G + V+ ++++ L+ V+KET+RL P + +L+ R A + V+G+ I
Sbjct: 283 IDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIH 340
Query: 413 AKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMG 472
V + R PE + +P +F P R+ + + IPFGAGR C G
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFA 400
Query: 473 IVTVELALANLLYKFDWEM--PP 493
I+ ++ + LL ++++EM PP
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPP 423
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLATSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW-QNPEEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 5/203 (2%)
Query: 293 DIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKV 352
D++DVL+ ++ + G + D I + +++ AG TS+ T W + L ++ A V
Sbjct: 224 DMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 353 QLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIP 412
E+ L G + V+ ++++ L+ V+KET+RL P + +L+ R A + V+G+ I
Sbjct: 283 IDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIH 340
Query: 413 AKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMG 472
V + R PE + +P +F P R+ + + IPFGAGR C G
Sbjct: 341 EGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFA 400
Query: 473 IVTVELALANLLYKFDWEM--PP 493
I+ ++ + LL ++++EM PP
Sbjct: 401 IMQIKAIFSVLLREYEFEMAQPP 423
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW-QNPEEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 66
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 67 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 124
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 125 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 164
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 165 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 220
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 221 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 277
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 278 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 334
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 335 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 390
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 9 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 68
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 69 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 126
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 127 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 166
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 167 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 222
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 223 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 279
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 280 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 336
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 337 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 392
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 393 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW-QNPEEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFE 424
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 185/456 (40%), Gaps = 53/456 (11%)
Query: 47 NNTKLPPGPRGLPFIGNLHQF----DVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSA 102
N+ +PPG GLP++G F D K + +++GP+ RL F +++ S
Sbjct: 9 NSLPIPPGDFGLPWLGETLNFLNDGDFGK------KRQQQFGPIFKTRL-FGKNVIFISG 61
Query: 103 KMAKEILKTHDLQ-FCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKV 161
+A L T + + F + L + L N L E R RKI L +
Sbjct: 62 ALANRFLFTKEQETFQATWPLSTRILLGPNALATQMG---EIHRSRRKILYQAFL-PRTL 117
Query: 162 QNFRPIREDEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSA- 220
++ P + V +E+ K+ L + + +T+ G++ ++
Sbjct: 118 DSYLPKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLF----MGEKVSQNPQLFPW 173
Query: 221 -RSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNF-QELDRFYQELIDEH 278
+ Q L + L + F GK QR + EL++ +
Sbjct: 174 FETYIQGLFSLPIPLPNTLF---------------GKSQRARALLLAELEKIIKA----- 213
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + P +ED + +LL R D L+L +K ++ + AG +T + +
Sbjct: 214 -----RQQQPPSEEDALGILLAARDDN--NQPLSLPELKDQILLLLFAGHETLTSALSSF 266
Query: 339 MTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPR 398
L ++ ++V+ E L + + + ++++ YL V++E +RL P V R
Sbjct: 267 CLLLGQHSDIRERVRQEQNKLQLSQE--LTAETLKKMPYLDQVLQEVLRLIPPVGGGF-R 323
Query: 399 EAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIP 458
E IQ C +G+ P V DP+ + +PE+F PERF F +P
Sbjct: 324 ELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVP 383
Query: 459 FGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPG 494
FG G R C G + ++L L+ +FDW + PG
Sbjct: 384 FGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPG 419
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDES 66
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 67 RFDKNLSQALKFVRDFAGDGLLTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 124
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 125 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 164
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 165 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 220
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG ++++ + +A
Sbjct: 221 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFA 277
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 278 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 334
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW-QNPEEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 335 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 390
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLLTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG ++++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW-QNPEEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLLTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG ++++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLATSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG + ++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW-QNPEEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 66
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 67 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 124
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 125 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 164
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 165 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 220
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 221 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 277
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 278 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPPFSL 334
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 335 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 390
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 9 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 68
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 69 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 126
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 127 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 166
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 167 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 222
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 223 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 279
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 280 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTSPAFSL 336
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 337 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 392
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 393 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 12 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 71
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 72 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 129
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 130 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 169
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 170 ----SFYRDQPHPFITSMVRALDEAMNKLQRTNPDDPAYDENKRQFQEDIKVMNDLVDKI 225
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +
Sbjct: 226 IADRKASGE--QSDDLLTHMLH-GKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFT 282
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 283 LYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPAFSL 339
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 340 YAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 395
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 396 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 430
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW-QNPEEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
P+G G+R C G + L L +L FD+E
Sbjct: 390 FKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFFGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG + ++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW-QNPEEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ + G +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG + ++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW-QNPEEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 188/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW-QNPEEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
P+G G+R C G + L L +L FD+E
Sbjct: 390 FKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ + G +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG + ++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ + G +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW-QNPEEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ + G +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ + G +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ + G +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW-QNPEEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
P G G+R C G + L L +L FD+E
Sbjct: 390 FKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEAADES 66
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W + I ++ + ++ + + D
Sbjct: 67 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWCKAHNI-LLPSFSQQAMKGYHAMMVDIA 124
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 125 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLSGFNYRFN------------------- 164
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 165 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 220
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 221 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 277
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 278 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 334
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 335 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 390
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 188/457 (41%), Gaps = 57/457 (12%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 66
Query: 113 --DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIRED 170
D P V + L+ +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 67 RFDKNLSQAPKFV--RDLAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVD 122
Query: 171 EVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNE 230
++++K + + A + + + E M LT I GF R++
Sbjct: 123 IAVQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN----------------- 164
Query: 231 TQALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELID 276
SF+ PF+ +D+ K++R + FQE + +L+D
Sbjct: 165 ------SFYRDQPHPFITSMVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVD 218
Query: 277 EHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVV 336
+ + + + Q +D++ +L KD L +NI+ ++ AG + ++ +
Sbjct: 219 KIIADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLAAGHEATSGLLS 275
Query: 337 WAMTYLTKNPRAMKKVQLEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLL 395
+A+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 276 FALYFLVKNPHELQKAAEEAARVLV---DPVPSHKQVKQLKYVGMVLNEALRLWPTAPAF 332
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQN 453
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 333 SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAI----PQ 388
Query: 454 FELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 389 HAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +G +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGEFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ +AG +T++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW-QNPEEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
P G G+R C G + L L +L FD+E
Sbjct: 390 FKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 186/455 (40%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 123
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 124 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 164 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 219
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ AG + ++ + +A
Sbjct: 220 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFA 276
Query: 339 MTYLTKNPRAMKKVQLEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 277 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTGPAFSL 333
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 389
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 186/455 (40%), Gaps = 53/455 (11%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 66
Query: 113 DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEV 172
AL + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 67 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIA 124
Query: 173 SRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQ 232
++++K + + A + + + E M LT I GF R++
Sbjct: 125 VQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 164
Query: 233 ALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELIDEH 278
SF+ PF+ +D+ K+QR + FQE + +L+D+
Sbjct: 165 ----SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI 220
Query: 279 LDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWA 338
+ + + Q +D++ +L KD L +NI+ ++ AG + ++ + +A
Sbjct: 221 IADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFA 277
Query: 339 MTYLTKNPRAMKKVQLEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLP 397
+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 278 LYFLVKNPHVLQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTGPAFSL 334
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQNFE 455
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 335 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHA 390
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 185/447 (41%), Gaps = 34/447 (7%)
Query: 50 KLPPGPRGL-PFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEI 108
KLPP G PF+G++ QF P + KKYG + ++ + VV +
Sbjct: 3 KLPPVVHGTTPFVGHIIQFG-KDPLGFMLKAKKKYGGIFTMNICGNRITVVGDVHQHSKF 61
Query: 109 LKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIR 168
+ R + G+ A +PY ++ + L K QNF P
Sbjct: 62 FTPRNEILSPREVYSFMVPVFGEGVAYA-APYPRMREQLNFLA--EELTVAKFQNFAPSI 118
Query: 169 EDEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALL 228
+ EV + ++ +N+ + ++ C+ FG+ D + AR +F LL
Sbjct: 119 QHEVRKFMKANWNKDEGE--INILDDCSAMIINTACQCLFGE--DLRKRLDAR-QFAQLL 173
Query: 229 NETQALFVSFFVTDYFPFMGWIDKFT-GKMQRLQNNFQELDRFYQELIDEHLDPNRTKSK 287
+ ++ + V F+ WI K + R ++ EL E+I K
Sbjct: 174 AKMESCLIPAAV-----FLPWILKLPLPQSYRCRDARAELQDILSEIIIAREKEEAQKDT 228
Query: 288 LPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLT--KN 345
D++ LL G + ++ + +++ AG TS T W++ +L +N
Sbjct: 229 --NTSDLLAGLLGAVYRDGTR--MSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRN 284
Query: 346 PRAMKKVQLEIRSLIGGNKGFVNEDDV-QELHYLKAVVKETMRLQPTVPLLLPREAIQKC 404
R + K+ EI +N D+V +E+ + + +E++R P + +L+ R+ ++
Sbjct: 285 KRHLAKLHQEIDEF----PAQLNYDNVMEEMPFAEQCARESIRRDPPLVMLM-RKVLKPV 339
Query: 405 IVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRR 464
V Y +P + + +D EA+ NP E+ PER + K + FGAG
Sbjct: 340 QVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPER------NMKLVDGAFCGFGAGVH 393
Query: 465 ICPGLNMGIVTVELALANLLYKFDWEM 491
C G G++ V+ LA +L +D+E+
Sbjct: 394 KCIGEKFGLLQVKTVLATVLRDYDFEL 420
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 97/457 (21%), Positives = 187/457 (40%), Gaps = 57/457 (12%)
Query: 53 PGPRGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLVVSSAKMAKEILKTH 112
P P+ + NL + KP + +++ + G + + +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 113 --DLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIRED 170
D P V + + +GL +++ +++ W++ I ++ + ++ + + D
Sbjct: 66 RFDKNLSQAPKFV--RDFAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVD 121
Query: 171 EVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNE 230
++++K + + A + + + E M LT I GF R++
Sbjct: 122 IAVQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFN----------------- 163
Query: 231 TQALFVSFFVTDYFPFMG----WIDKFTGKMQRL----------QNNFQELDRFYQELID 276
SF+ PF+ +D+ K++R + FQE + +L+D
Sbjct: 164 ------SFYRDQPHPFITSMVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 277 EHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVV 336
+ + + + Q +D++ +L KD L +NI+ ++ AG + ++ +
Sbjct: 218 KIIADRKASGE--QSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLAAGHEATSGLLS 274
Query: 337 WAMTYLTKNPRAMKKVQLEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLL 395
+A+ +L KNP ++K E R L+ + V++L Y+ V+ E +RL PT P
Sbjct: 275 FALYFLVKNPHELQKAAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAF 331
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP-EEFYPERFVD-SCIDFKGQN 453
+ Y + + V + RD W + EEF PERF + S I
Sbjct: 332 SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQ 387
Query: 454 FELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWE 490
PFG G+R C G + L L +L FD+E
Sbjct: 388 HAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 188/454 (41%), Gaps = 38/454 (8%)
Query: 45 SKNNTKLPP-GPRGLPFIGNLHQFDVSKPHVSFWELSKK--YGPLMSLRLGFVPSLVVSS 101
+ KLPP P +PF+G++ QF K + F + K+ + ++ +G +V
Sbjct: 2 TSGKGKLPPVYPVTVPFLGHIVQF--GKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGD 59
Query: 102 AKMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKV 161
+ R + G+ A +PY ++ + L K
Sbjct: 60 PHEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYA-APYPRMREQLNFLA--EELTIAKF 116
Query: 162 QNFRPIREDEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSAR 221
QNF P + EV + + + K ++NL E ++ C+ FG+ D + +AR
Sbjct: 117 QNFVPAIQHEVRKFMAENWKE--DEGVINLLEDCGAMIINTACQCLFGE--DLRKRLNAR 172
Query: 222 SRFQALLNETQALFVSFFVTDYFPFMGWIDKFT-GKMQRLQNNFQELDRFYQELIDEHLD 280
F LL++ ++ + V FM W+ + + R + EL + E+I
Sbjct: 173 -HFAQLLSKMESSLIPAAV-----FMPWLLRLPLPQSARCREARAELQKILGEIIVAREK 226
Query: 281 PNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMT 340
+K D++ LL+ G + ++L + +++ AG TS T W+M
Sbjct: 227 EEASKDN--NTSDLLGGLLKAVYRDGTR--MSLHEVCGMIVAAMFAGQHTSTITTSWSML 282
Query: 341 YLT--KNPRAMKKVQLEIRSLIGGNKGFVNEDDV-QELHYLKAVVKETMRLQPTVPLLLP 397
+L KN + + K+ EI +N D+V E+ + + V+E++R P + L++
Sbjct: 283 HLMHPKNKKWLDKLHKEIDEF----PAQLNYDNVMDEMPFAERCVRESIRRDPPL-LMVM 337
Query: 398 REAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELI 457
R + V Y +P + + D EA+ NP + PER D +D I
Sbjct: 338 RMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA-----FI 390
Query: 458 PFGAGRRICPGLNMGIVTVELALANLLYKFDWEM 491
FGAG C G ++ V+ LA ++D+++
Sbjct: 391 GFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 424
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 149/341 (43%), Gaps = 32/341 (9%)
Query: 156 LNSNKVQNFRPIREDEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDED 215
L K QNF P + EV + + + K ++NL E ++ C+ FG+ D
Sbjct: 120 LTIAKFQNFVPAIQHEVRKFMAENWKE--DEGVINLLEDCGAMIINTACQCLFGE--DLR 175
Query: 216 EATSARSRFQALLNETQALFVSFFVTDYFPFMGWIDKFT-GKMQRLQNNFQELDRFYQEL 274
+ +AR F LL++ ++ + V FM W+ + + R + EL + E+
Sbjct: 176 KRLNAR-HFAQLLSKMESSLIPAAV-----FMPWLLRLPLPQSARCREARAELQKILGEI 229
Query: 275 IDEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAAT 334
I +K D++ LL+ G + ++L + +++ AG TS T
Sbjct: 230 IVAREKEEASKDN--NTSDLLGGLLKAVYRDGTR--MSLHEVCGMIVAAMFAGQHTSTIT 285
Query: 335 VVWAMTYLT--KNPRAMKKVQLEIRSLIGGNKGFVNEDDV-QELHYLKAVVKETMRLQPT 391
W+M +L KN + + K+ EI +N D+V E+ + + V+E++R P
Sbjct: 286 TSWSMLHLMHPKNKKWLDKLHKEIDEFPAQ----LNYDNVMDEMPFAERCVRESIRRDP- 340
Query: 392 VPLLLPREAIQKCI-VEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFK 450
PLL+ ++ + V Y +P + + D EA+ NP + PER D +D
Sbjct: 341 -PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA 397
Query: 451 GQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEM 491
I FGAG C G ++ V+ LA ++D+++
Sbjct: 398 -----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 433
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 149/341 (43%), Gaps = 32/341 (9%)
Query: 156 LNSNKVQNFRPIREDEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDED 215
L K QNF P + EV + + + K ++NL E ++ C+ FG+ D
Sbjct: 105 LTIAKFQNFVPAIQHEVRKFMAENWKE--DEGVINLLEDCGAMIINTACQCLFGE--DLR 160
Query: 216 EATSARSRFQALLNETQALFVSFFVTDYFPFMGWIDKFT-GKMQRLQNNFQELDRFYQEL 274
+ +AR F LL++ ++ + V FM W+ + + R + EL + E+
Sbjct: 161 KRLNAR-HFAQLLSKMESSLIPAAV-----FMPWLLRLPLPQSARCREARAELQKILGEI 214
Query: 275 IDEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAAT 334
I +K D++ LL+ G + ++L + +++ AG TS T
Sbjct: 215 IVAREKEEASKDN--NTSDLLGGLLKAVYRDGTR--MSLHEVCGMIVAAMFAGQHTSTIT 270
Query: 335 VVWAMTYLT--KNPRAMKKVQLEIRSLIGGNKGFVNEDDV-QELHYLKAVVKETMRLQPT 391
W+M +L KN + + K+ EI +N D+V E+ + + V+E++R P
Sbjct: 271 TSWSMLHLMHPKNKKWLDKLHKEIDEF----PAQLNYDNVMDEMPFAERCVRESIRRDP- 325
Query: 392 VPLLLPREAIQKCI-VEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFK 450
PLL+ ++ + V Y +P + + D EA+ NP + PER D +D
Sbjct: 326 -PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA 382
Query: 451 GQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEM 491
I FGAG C G ++ V+ LA ++D+++
Sbjct: 383 -----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 418
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 28/214 (13%)
Query: 273 ELIDEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSA 332
E + ++L P + ++ D+I +L + + L+ +I A+++NV +A T+ +
Sbjct: 219 EQLSQYLMPVIKERRVNPGSDLISILCTSEYE---GMALSDKDILALILNVLLAATEPAD 275
Query: 333 ATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTV 392
T+ + +L NP M V L RSL+ + ET+R +P V
Sbjct: 276 KTLALMIYHLLNNPEQMNDV-LADRSLV------------------PRAIAETLRYKPPV 316
Query: 393 PLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCID--FK 450
L+ PR+ Q +V G EI T VF A RDPEA++ P+ F R D I F
Sbjct: 317 QLI-PRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHR-EDLGIKSAFS 374
Query: 451 GQNFELIPFGAGRRICPGLNMGIVTVELALANLL 484
G L FG+G C G +E+ +AN++
Sbjct: 375 GAARHL-AFGSGIHNCVGTAFAKNEIEI-VANIV 406
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 34/342 (9%)
Query: 156 LNSNKVQNFRPIREDEVSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDE 214
L K QNF P + EV + M K +NL E ++ C+ FG+ D
Sbjct: 107 LTIAKFQNFVPAIQHEVRKFMAANWDKDEGE---INLLEDCSTMIINTACQCLFGE--DL 161
Query: 215 DEATSARSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQEL 274
+ AR RF LL + ++ + V + + R EL + E+
Sbjct: 162 RKRLDAR-RFAQLLAKMESSLIPAAVFL----PILLKLPLPQSARCHEARTELQKILSEI 216
Query: 275 I----DEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDT 330
I +E ++ + + S D++ LL G ++L + +++ AG T
Sbjct: 217 IIARKEEEVNKDSSTS------DLLSGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQHT 268
Query: 331 SAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDV-QELHYLKAVVKETMRLQ 389
S+ T W+M +L +P +K ++ +R I +N ++V E+ + + +E++R
Sbjct: 269 SSITTTWSMLHLM-HPANVKHLE-ALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRD 326
Query: 390 PTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDF 449
P + L+L R+ + V Y +P + + D EA+ P + PER D
Sbjct: 327 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DE 379
Query: 450 KGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEM 491
K + I FGAG C G G++ V+ LA +D+++
Sbjct: 380 KVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 34/342 (9%)
Query: 156 LNSNKVQNFRPIREDEVSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDE 214
L K QNF P + EV + M K +NL E ++ C+ FG+ D
Sbjct: 108 LTIAKFQNFVPAIQHEVRKFMAANWDKDEGE---INLLEDCSTMIINTACQCLFGE--DL 162
Query: 215 DEATSARSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQEL 274
+ AR RF LL + ++ + V + + R EL + E+
Sbjct: 163 RKRLDAR-RFAQLLAKMESSLIPAAVFL----PILLKLPLPQSARCHEARTELQKILSEI 217
Query: 275 I----DEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDT 330
I +E ++ + + S D++ LL G ++L + +++ AG T
Sbjct: 218 IIARKEEEVNKDSSTS------DLLSGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQHT 269
Query: 331 SAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDV-QELHYLKAVVKETMRLQ 389
S+ T W+M +L +P +K ++ +R I +N ++V E+ + + +E++R
Sbjct: 270 SSITTTWSMLHLM-HPANVKHLE-ALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRD 327
Query: 390 PTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDF 449
P + L+L R+ + V Y +P + + D EA+ P + PER D
Sbjct: 328 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DE 380
Query: 450 KGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEM 491
K + I FGAG C G G++ V+ LA +D+++
Sbjct: 381 KVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 421
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 34/342 (9%)
Query: 156 LNSNKVQNFRPIREDEVSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDE 214
L K QNF P + EV + M K +NL E ++ C+ FG+ D
Sbjct: 120 LTIAKFQNFVPAIQHEVRKFMAANWDKDEGE---INLLEDCSTMIINTACQCLFGE--DL 174
Query: 215 DEATSARSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQEL 274
+ AR RF LL + ++ + V + + R EL + E+
Sbjct: 175 RKRLDAR-RFAQLLAKMESSLIPAAVFL----PILLKLPLPQSARCHEARTELQKILSEI 229
Query: 275 I----DEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDT 330
I +E ++ + + S D++ LL G ++L + +++ AG T
Sbjct: 230 IIARKEEEVNKDSSTS------DLLSGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQHT 281
Query: 331 SAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDV-QELHYLKAVVKETMRLQ 389
S+ T W+M +L +P +K ++ +R I +N ++V E+ + + +E++R
Sbjct: 282 SSITTTWSMLHLM-HPANVKHLE-ALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRD 339
Query: 390 PTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDF 449
P + L+L R+ + V Y +P + + D EA+ P + PER D
Sbjct: 340 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DE 392
Query: 450 KGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEM 491
K + I FGAG C G G++ V+ LA +D+++
Sbjct: 393 KVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 34/342 (9%)
Query: 156 LNSNKVQNFRPIREDEVSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDE 214
L K QNF P + EV + M K +NL E ++ C+ FG+ D
Sbjct: 107 LTIAKFQNFVPAIQHEVRKFMAANWDKDEGE---INLLEDCSTMIINTACQCLFGE--DL 161
Query: 215 DEATSARSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQEL 274
+ AR RF LL + ++ + V + + R EL + E+
Sbjct: 162 RKRLDAR-RFAQLLAKMESSLIPAAVFL----PILLKLPLPQSARCHEARTELQKILSEI 216
Query: 275 I----DEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDT 330
I +E ++ + + S D++ LL G ++L + +++ AG T
Sbjct: 217 IIARKEEEVNKDSSTS------DLLSGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQHT 268
Query: 331 SAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDV-QELHYLKAVVKETMRLQ 389
S+ T W+M +L +P +K ++ +R I +N ++V E+ + + +E++R
Sbjct: 269 SSITTTWSMLHLM-HPANVKHLE-ALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRD 326
Query: 390 PTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDF 449
P + L+L R+ + V Y +P + + D EA+ P + PER D
Sbjct: 327 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DE 379
Query: 450 KGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEM 491
K + I FGAG C G G++ V+ LA +D+++
Sbjct: 380 KVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 34/342 (9%)
Query: 156 LNSNKVQNFRPIREDEVSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDE 214
L K QNF P + EV + M K +NL E ++ C+ FG+ D
Sbjct: 106 LTIAKFQNFVPAIQHEVRKFMAANWDKDEGE---INLLEDCSTMIINTACQCLFGE--DL 160
Query: 215 DEATSARSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQEL 274
+ AR RF LL + ++ + V + + R EL + E+
Sbjct: 161 RKRLDAR-RFAQLLAKMESSLIPAAVFLPI----LLKLPLPQSARCHEARTELQKILSEI 215
Query: 275 I----DEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDT 330
I +E ++ + + S D++ LL G ++L + +++ AG T
Sbjct: 216 IIARKEEEVNKDSSTS------DLLSGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQHT 267
Query: 331 SAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDV-QELHYLKAVVKETMRLQ 389
S+ T W+M +L +P +K ++ +R I +N ++V E+ + + +E++R
Sbjct: 268 SSITTTWSMLHLM-HPANVKHLE-ALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRD 325
Query: 390 PTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDF 449
P + L+L R+ + V Y +P + + D EA+ P + PER D
Sbjct: 326 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DE 378
Query: 450 KGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEM 491
K + I FGAG C G G++ V+ LA +D+++
Sbjct: 379 KVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 419
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 138/338 (40%), Gaps = 26/338 (7%)
Query: 156 LNSNKVQNFRPIREDEVSR-MIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDE 214
L K QNF P + EV + M K +NL E ++ C+ FG+ D
Sbjct: 120 LTIAKFQNFVPAIQHEVRKFMAANWDKDEGE---INLLEDCSTMIINTACQCLFGE--DL 174
Query: 215 DEATSARSRFQALLNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQEL 274
+ AR RF LL + ++ + V + + R EL + E+
Sbjct: 175 RKRLDAR-RFAQLLAKMESSLIPAAVFL----PILLKLPLPQSARCHEARTELQKILSEI 229
Query: 275 IDEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAAT 334
I K D++ LL G ++L + +++ AG TS+ T
Sbjct: 230 IIARKAAAVNKDS--STSDLLSGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQHTSSIT 285
Query: 335 VVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDV-QELHYLKAVVKETMRLQPTVP 393
W+M +L +P +K ++ +R I +N ++V E+ + + +E++R P +
Sbjct: 286 TTWSMLHLM-HPANVKHLE-ALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPL- 342
Query: 394 LLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQN 453
L+L R+ + V Y +P + + D EA+ P + PER D K +
Sbjct: 343 LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEG 396
Query: 454 FELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEM 491
I FGAG C G G++ V+ LA +D+++
Sbjct: 397 -AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 27/257 (10%)
Query: 251 DKFTGKMQRLQNNFQE--LDRFYQELIDEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFK 308
DK K+ R N +E + +E + + L P+ K P+++ + ++ +D G
Sbjct: 192 DKLLPKLARTTVNKEEKQIASAAREKLWKWLTPSGLDRK-PREQSWLGSYVKQLQDEGID 250
Query: 309 VDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVN 368
++ +A+L+ ++V + A W M YL +P A++ V+ EI+ G K
Sbjct: 251 AEM---QRRAMLLQLWVTQGNAGPA-AFWVMGYLLTHPEALRAVREEIQ----GGKHLRL 302
Query: 369 EDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQK---CIVEG--YEIPAKTRVFVNAWA 423
E+ + +V+ ET+RL T L+ R+ Q C+ G Y + R+ V +
Sbjct: 303 EERQKNTPVFDSVLWETLRL--TAAALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFI 360
Query: 424 IGR-DPEAWQNPEEFYPERFVDSCIDFKGQNFE--------LIPFGAGRRICPGLNMGIV 474
+ DP+ Q PE F +RF+++ K F+ +P+G +CPG + +
Sbjct: 361 SPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVH 420
Query: 475 TVELALANLLYKFDWEM 491
++ + +L +FD E+
Sbjct: 421 AIKELVFTILTRFDVEL 437
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 22/202 (10%)
Query: 313 LDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEI-RSL--------IGGN 363
L+ K L+ ++ + +T AT W++ + +NP AMK E+ R+L + GN
Sbjct: 256 LEKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGN 314
Query: 364 KGFVNEDDVQELHYLKAVVKETMRLQ-PTVPLLLPREAIQKCIVEG-YEIPAKTRVFVNA 421
+++ ++ +L L +++KE++RL ++ + +E + +G Y I + +
Sbjct: 315 PICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYP 374
Query: 422 WAIGRDPEAWQNPEEFYPERFVDS---------CIDFKGQNFELIPFGAGRRICPGLNMG 472
+ DPE + +P F +R++D C K + + +PFG+G ICPG
Sbjct: 375 QLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLK-YYYMPFGSGATICPGRLFA 433
Query: 473 IVTVELALANLLYKFDWEMPPG 494
I ++ L +L F+ E+ G
Sbjct: 434 IHEIKQFLILMLSYFELELIEG 455
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 107/500 (21%), Positives = 199/500 (39%), Gaps = 92/500 (18%)
Query: 40 QRHKSSKNNTKLPPGPRGL-PFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPSLV 98
++ S + T PP GL P++G QF + P +K+G + + +L
Sbjct: 3 KKTSSRRRQTGEPPLENGLIPYLGCALQFGAN-PLEFLRANQRKHGHVFTCKL------- 54
Query: 99 VSSAKMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPYDEYWREIRKICVIHLLNS 158
M K + F + P LSY+ + +D W++ H S
Sbjct: 55 -----MGKYV------HFITNP-------LSYHKVLCHGKYFD--WKKF------HFATS 88
Query: 159 NKVQNFR---PIREDEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDED 215
K R P+ + + + K++ L +L+E MM I+
Sbjct: 89 AKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIM-----------R 137
Query: 216 EATSARSRFQALLNETQALFVS--FFVTDYFPFMG--WIDKFTGKMQRLQN--NFQELDR 269
S+ S+ A + E F F Y G + T K L N NF++ D+
Sbjct: 138 PPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFDK 197
Query: 270 FYQELID--------------EHLDPNRTKSKLPQQEDIIDVL-LQIRKDRGFKVDLTLD 314
+ L+ E L + L ++E I +++ L++ + L+
Sbjct: 198 VFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELISLRMFLNDTLSTFDDLE 257
Query: 315 NIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEI-RSL--------IGGNKG 365
K L+ ++ + +T AT W++ + +NP AMK E+ R+L + GN
Sbjct: 258 KAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPI 316
Query: 366 FVNEDDVQELHYLKAVVKETMRLQ-PTVPLLLPREAIQKCIVEG-YEIPAKTRVFVNAWA 423
+++ ++ +L L +++KE++RL ++ + +E + +G Y I + +
Sbjct: 317 CLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQL 376
Query: 424 IGRDPEAWQNPEEFYPERFVDS---------CIDFKGQNFELIPFGAGRRICPGLNMGIV 474
+ DPE + +P F +R++D C K + + +PFG+G ICPG I
Sbjct: 377 MHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLK-YYYMPFGSGATICPGRLFAIH 435
Query: 475 TVELALANLLYKFDWEMPPG 494
++ L +L F+ E+ G
Sbjct: 436 EIKQFLILMLSYFELELIEG 455
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 372 VQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW 431
VQ+ Y + V+E R P P ++ R A Q EG P +V ++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 432 QNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRI----CPGLNMGIVTVELALANLLYKF 487
+P+EF PERF + +F IP G G CPG + + +++A L+
Sbjct: 327 ADPQEFRPERFR----AWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 488 DWEMPPGLKSHDFDVLPGL 506
+++P S DF LP L
Sbjct: 383 RYDVPDQDLSIDFARLPAL 401
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 372 VQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW 431
VQ+ Y + V+E R P P ++ R A Q EG P +V ++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 432 QNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRI----CPGLNMGIVTVELALANLLYKF 487
+P+EF PERF + +F IP G G CPG + + +++A L+
Sbjct: 319 ADPQEFRPERFR----AWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 488 DWEMPPGLKSHDFDVLPGL 506
+++P S DF LP L
Sbjct: 375 RYDVPDQDLSIDFARLPAL 393
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 372 VQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW 431
VQ+ Y + V+E R P P ++ R A Q EG P +V ++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 432 QNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRI----CPGLNMGIVTVELALANLLYKF 487
+P+EF PERF + +F IP G G CPG + + +++A L+
Sbjct: 327 ADPQEFRPERFR----AWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 488 DWEMPPGLKSHDFDVLPGL 506
+++P S DF LP L
Sbjct: 383 RYDVPDQDLSIDFARLPAL 401
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 372 VQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW 431
VQ+ Y + V+E R P P ++ R A Q EG P +V ++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 432 QNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRI----CPGLNMGIVTVELALANLLYKF 487
+P+EF PERF + +F IP G G CPG + + +++A L+
Sbjct: 319 ADPQEFRPERFR----AWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 488 DWEMPPGLKSHDFDVLPGL 506
+++P S DF LP L
Sbjct: 375 RYDVPDQDLSIDFARLPAL 393
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 372 VQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW 431
VQ+ Y + V+E R P P ++ R A Q EG P +V ++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 432 QNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRI----CPGLNMGIVTVELALANLLYKF 487
+P+EF PERF + +F IP G G CPG + + +++A L+
Sbjct: 319 ADPQEFRPERFR----AWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 488 DWEMPPGLKSHDFDVLPGL 506
+++P S DF LP L
Sbjct: 375 RYDVPDQDLSIDFARLPAL 393
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 372 VQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW 431
VQ+ Y + V+E R P P ++ R A Q EG P +V ++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 432 QNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRI----CPGLNMGIVTVELALANLLYKF 487
+P+EF PERF + +F IP G G CPG + + +++A L+
Sbjct: 327 ADPQEFRPERFR----AWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 488 DWEMPPGLKSHDFDVLPGL 506
+++P S DF LP L
Sbjct: 383 RYDVPDQDLSIDFARLPAL 401
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 168/415 (40%), Gaps = 72/415 (17%)
Query: 81 KKYGPLMSLRLGFVPSLVVSSAKMAKEILKTHDLQFCSR---PA---LVGQQKLS-YNGL 133
++ GP + + V + VS + K++L + D+ +R PA +VG L+ + +
Sbjct: 25 REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAV 84
Query: 134 DLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEVSRMIEKISKSVAASKLVNLSE 193
+ F+ Y R++R++ V ++ +V RP E V+ +++++++ A + E
Sbjct: 85 ENMFTAYGPNHRKLRRL-VAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQE 143
Query: 194 VMMSLTSTIICRIGFGKRYDEDEATSARSRFQALLNETQALFVSFFVTDYFPFMGWIDKF 253
+ L +I + G D R F+AL++ G D
Sbjct: 144 LAYPLPIAVIGHL-MGVPQDR------RDGFRALVD------------------GVFDTT 178
Query: 254 TGKMQRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTL 313
+ + N R Y E++D+ + R +D+ +L+ R D G L+
Sbjct: 179 LDQAEAQANTA----RLY-EVLDQLIAAKRATPG----DDMTSLLIAARDDEGDGDRLSP 229
Query: 314 DNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQ 373
+ ++ L+ + AG +T+ + A+ L P + V+ KG V DV
Sbjct: 230 EELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVR----------KGEVTWADV- 278
Query: 374 ELHYLKAVVKETMRLQPTVPLLLPREAIQK-CIVEGYEIPAKTRVFVNAWAIGRDPEAWQ 432
V+ET+R +P V L R A+ + +G I + + A R P+ +
Sbjct: 279 --------VEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHE 330
Query: 433 NPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+ + F R V E + FG G C G + + V LAL +L +F
Sbjct: 331 DADTFDATRTVK----------EHLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 382 VKETMRLQPTVPLLLPREAIQKCIV-EGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPE 440
V+E R P P L ++K V E T V ++ + DP W +P+EF PE
Sbjct: 280 VQEVRRYYPFGPFL--GALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPE 337
Query: 441 RFVDSCIDFKGQNFELIPFGAGR----RICPGLNMGIVTVELALANLLYKFDWEMPPGLK 496
RF + + F++IP G G CPG + I ++ +L L+++ ++++P
Sbjct: 338 RFAEREENL----FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSL 393
Query: 497 SHDFDVLPGL 506
+ +P L
Sbjct: 394 HYSLARMPSL 403
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 305 RGFKVDLTLDN--IKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGG 362
R F D LD+ ++ ++ V VAG +T+ + AM ++P K++
Sbjct: 231 RAFH-DGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK--------- 280
Query: 363 NKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAW 422
+ V+E +R PT+P+ R A + V G IP T VF+ A
Sbjct: 281 ----------ENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAH 330
Query: 423 AIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALAN 482
RDP + + + F D + + + I FG G C G + + + A+A
Sbjct: 331 VAHRDPRVFADADRF------DITVKREAPS---IAFGGGPHFCLGTALARLELTEAVAA 381
Query: 483 LLYKFD 488
L + D
Sbjct: 382 LATRLD 387
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 305 RGFKVDLTLDN--IKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGG 362
R F D LD+ ++ ++ V VAG +T+ + AM ++P K++
Sbjct: 221 RAFH-DGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK--------- 270
Query: 363 NKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAW 422
+ V+E +R PT+P+ R A + V G IP T VF+ A
Sbjct: 271 ----------ENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAH 320
Query: 423 AIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALAN 482
RDP + + + F D + + + I FG G C G + + + A+A
Sbjct: 321 VAHRDPRVFADADRF------DITVKREAPS---IAFGGGPHFCLGTALARLELTEAVAA 371
Query: 483 LLYKFD 488
L + D
Sbjct: 372 LATRLD 377
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 86/203 (42%), Gaps = 32/203 (15%)
Query: 285 KSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTK 344
+ + P + D++ +LLQ D G + L+ + A++ + AGTDT+ + +A+ L +
Sbjct: 216 RRRNPLENDVLTMLLQAEAD-GSR--LSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLR 272
Query: 345 NPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKC 404
+P A++ V+ E ++ + E +R + + + R A Q
Sbjct: 273 SPEALELVK-------------------AEPGLMRNALDEVLRFENILRIGTVRFARQDL 313
Query: 405 IVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRR 464
G I VF+ + RD + P+ F D + + +G G
Sbjct: 314 EYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF----------DVRRDTSASLAYGRGPH 363
Query: 465 ICPGLNMGIVTVELALANLLYKF 487
+CPG+++ + E+A+ + +F
Sbjct: 364 VCPGVSLARLEAEIAVGTIFRRF 386
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 32/203 (15%)
Query: 285 KSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTK 344
+ + P + D++ +LLQ D G + L+ + A++ + AGTDT+ + +A+ L +
Sbjct: 216 RRRNPLENDVLTMLLQAEAD-GSR--LSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLR 272
Query: 345 NPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKC 404
+P A++ V+ E ++ + E +R + + R A Q
Sbjct: 273 SPEALELVK-------------------AEPGLMRNALDEVLRFDNILRIGTVRFARQDL 313
Query: 405 IVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRR 464
G I VF+ + RD + P+ F D + + +G G
Sbjct: 314 EYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF----------DVRRDTSASLAYGRGPH 363
Query: 465 ICPGLNMGIVTVELALANLLYKF 487
+CPG+++ + E+A+ + +F
Sbjct: 364 VCPGVSLARLEAEIAVGTIFRRF 386
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 378 LKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIG--RDPEAWQNPE 435
+ A+V+E +R +P P + R + V G IPA V VN W + RD +A +P+
Sbjct: 274 IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPD 330
Query: 436 EFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
F P R K + FG G C G + + +AL ++ +F
Sbjct: 331 RFDPSR--------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 378 LKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIG--RDPEAWQNPE 435
+ A+V+E +R +P P + R + V G IPA V VN W + RD +A +P+
Sbjct: 294 IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPD 350
Query: 436 EFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
F P R K + FG G C G + + +AL ++ +F
Sbjct: 351 RFDPSR--------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 355 EIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAK 414
EIRS+I N G + ++++ K+VV E +R +P V R A + ++E ++ K
Sbjct: 324 EIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGR-AKKDLVIESHDAAFK 382
Query: 415 TRVFVNAWA----IGRDPEAWQNPEEFYPERFV 443
+ + RDP+ + +EF PERFV
Sbjct: 383 VKAGEMLYGYQPLATRDPKIFDRADEFVPERFV 415
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 355 EIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAK 414
EIRS+I N G + ++++ K+VV E +R +P V R A + ++E ++ K
Sbjct: 324 EIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGR-AKKDLVIESHDAAFK 382
Query: 415 TRVFVNAWA----IGRDPEAWQNPEEFYPERFV 443
+ + RDP+ + +EF PERFV
Sbjct: 383 VKAGEMLYGYQPLATRDPKIFDRADEFVPERFV 415
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 38/206 (18%)
Query: 291 QEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMK 350
++ ++D L+ + + G DL D + + + + VAG +T+ + L ++P +
Sbjct: 211 EDGLLDELIARQLEEG---DLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHP---E 264
Query: 351 KVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYE 410
++ + +R + G V+ VV+E +R +V + R A + V G
Sbjct: 265 QIDVLLR-----DPGAVS-----------GVVEELLRFT-SVSDHIVRMAKEDIEVGGAT 307
Query: 411 IPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLN 470
I A V V+ + RD +A++NP+ F D + + FG G C G N
Sbjct: 308 IKAGDAVLVSITLMNRDAKAYENPDIF----------DARRNARHHVGFGHGIHQCLGQN 357
Query: 471 MGIVTVELALANLLYKFDWEMPPGLK 496
+ +E+AL L + PGL+
Sbjct: 358 LARAELEIALGGLFARI-----PGLR 378
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 49/233 (21%)
Query: 270 FYQELIDEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTD 329
+++ELI K K Q+D+I +LL+ R+ K LT + + + + +AG +
Sbjct: 190 YFKELIQ--------KRKRHPQQDMISMLLKGRE----KDKLTEEEAASTCILLAIAGHE 237
Query: 330 TSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQ 389
T+ + ++ L ++P + K++ E LIG V+E +R +
Sbjct: 238 TTVNLISNSVLCLLQHPEQLLKLR-ENPDLIG------------------TAVEECLRYE 278
Query: 390 -PTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCID 448
PT + R A + + G I +V++ A RDP + NP+ F D
Sbjct: 279 SPTQ--MTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVF----------D 326
Query: 449 FKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLKSHDFD 501
+ FG G +C G ++ + ++A+ LL + P L DF+
Sbjct: 327 ITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRM-----PSLNLADFE 374
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 30/196 (15%)
Query: 292 EDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKK 351
+D+ L+Q ++ LT I + L + AG +T+ + +V A+ L+ +P
Sbjct: 211 DDLTSALIQASENGDH---LTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHP----- 262
Query: 352 VQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEI 411
E R+L+ + AVV+ET+R +L R A + V I
Sbjct: 263 ---EQRALVLSGEA-----------EWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVI 308
Query: 412 PAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNM 471
PA + V+ A+GRD A P +RF G I FG G +CPG +
Sbjct: 309 PAGDALIVSYGALGRDERA-HGPTA---DRF--DLTRTSGNRH--ISFGHGPHVCPGAAL 360
Query: 472 GIVTVELALANLLYKF 487
+ +AL L +F
Sbjct: 361 SRMEAGVALPALYARF 376
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 87/213 (40%), Gaps = 36/213 (16%)
Query: 291 QEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMK 350
++D++ +L + D + D I A + + AG DT++++ A+ L++NP +
Sbjct: 235 KDDVMSLLANSKLDGNYIDD---KYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLA 291
Query: 351 KVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYE 410
+ + + +V E +R V + R A+ V G
Sbjct: 292 LAK-------------------SDPALIPRLVDEAVRWTAPVKSFM-RTALADTEVRGQN 331
Query: 411 IPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLN 470
I R+ ++ + RD E + NP+EF RF + + FG G +C G +
Sbjct: 332 IKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPNRHLG----------FGWGAHMCLGQH 381
Query: 471 MGIVTVELALANLLYKF---DWEMPPGLKSHDF 500
+ + +++ LL K + PP L + +F
Sbjct: 382 LAKLEMKIFFEELLPKLKSVELSGPPRLVATNF 414
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 27/168 (16%)
Query: 321 MNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKA 380
+ + VAG +T A+ + W+ L+ P K+V + A
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRV-------------------AESEEAALA 256
Query: 381 VVKETMRLQPTVPLLLPREAIQKCIVEGYE-IPAKTRVFVNAWAIGRDPEAWQNPEEFYP 439
+E +RL P +L R +++ ++ G + +P T + ++ + R + + E F P
Sbjct: 257 AFQEALRLYPPAWILTRR--LERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRP 312
Query: 440 ERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
ERF++ G+ F PFG G+R+C G + ++ + L +F
Sbjct: 313 ERFLEERGTPSGRYF---PFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 90/248 (36%), Gaps = 43/248 (17%)
Query: 242 DYFPFMGWIDKFT--GKMQRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQQ-EDIIDVL 298
D F W D F + Q E+ + LID SK Q ED++ L
Sbjct: 187 DRAAFRVWTDAFVFPDDPAQAQTAMAEMSGYLSRLID---------SKRGQDGEDLLSAL 237
Query: 299 LQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRS 358
++ + G + LT + + + + VAG +T+ + M L +P + ++
Sbjct: 238 VRTSDEDGSR--LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALR----- 290
Query: 359 LIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVF 418
++ L V+E +R + V R ++ ++G IPA V
Sbjct: 291 --------------ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVL 336
Query: 419 VNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVEL 478
V R PE + +P F D + + FG G C G + + +
Sbjct: 337 VVLADAHRTPERFPDPHRF----------DIRRDTAGHLAFGHGIHFCIGAPLARLEARI 386
Query: 479 ALANLLYK 486
A+ LL +
Sbjct: 387 AVRALLER 394
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 90/248 (36%), Gaps = 43/248 (17%)
Query: 242 DYFPFMGWIDKFT--GKMQRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQQ-EDIIDVL 298
D F W D F + Q E+ + LID SK Q ED++ L
Sbjct: 187 DRAAFRVWTDAFVFPDDPAQAQTAMAEMSGYLSRLID---------SKRGQDGEDLLSAL 237
Query: 299 LQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRS 358
++ + G + LT + + + + VAG +T+ + M L +P + ++
Sbjct: 238 VRTSDEDGSR--LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALR----- 290
Query: 359 LIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVF 418
++ L V+E +R + V R ++ ++G IPA V
Sbjct: 291 --------------ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVL 336
Query: 419 VNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVEL 478
V R PE + +P F D + + FG G C G + + +
Sbjct: 337 VVLADAHRTPERFPDPHRF----------DIRRDTAGHLAFGHGIHFCIGAPLARLEARI 386
Query: 479 ALANLLYK 486
A+ LL +
Sbjct: 387 AVRALLER 394
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 94/252 (37%), Gaps = 45/252 (17%)
Query: 270 FYQELIDEHLDPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTD 329
+ + LIDE RT ED++ L+ + + LT D I A + +AG +
Sbjct: 211 YLRALIDER---RRTPG-----EDLMSGLVAVEESGD---QLTEDEIIATCNLLLIAGHE 259
Query: 330 TSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQ 389
T+ + A + + P + + G++ AV++ETMR
Sbjct: 260 TTVNLIANAALAMLRTPGQWAALAAD------GSRA-------------SAVIEETMRYD 300
Query: 390 PTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDF 449
P V L+ R A + + +P + + A RDP P+ F P+R
Sbjct: 301 PPV-QLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR-------- 351
Query: 450 KGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLKSHDFDVLPGLAMH 509
+ FG G C G + + +AL L +F P S + + L +
Sbjct: 352 --AQIRHLGFGKGAHFCLGAPLARLEATVALPALAARF----PEARLSGEPEYKRNLTLR 405
Query: 510 KKNVLSLRAKYH 521
+ LS+ +H
Sbjct: 406 GMSTLSIAVHHH 417
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 90/248 (36%), Gaps = 43/248 (17%)
Query: 242 DYFPFMGWIDKFT--GKMQRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQQ-EDIIDVL 298
D F W D F + Q E+ + LID SK Q ED++ L
Sbjct: 187 DRAAFRVWTDAFVFPDDPAQAQTAMAEMSGYLSRLID---------SKRGQDGEDLLSAL 237
Query: 299 LQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRS 358
++ + G + LT + + + + VAG +T+ + M L +P + ++
Sbjct: 238 VRTSDEDGSR--LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALR----- 290
Query: 359 LIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVF 418
++ L V+E +R + V R ++ ++G IPA V
Sbjct: 291 --------------ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVL 336
Query: 419 VNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVEL 478
V R PE + +P F D + + FG G C G + + +
Sbjct: 337 VVLADAHRTPERFPDPHRF----------DIRRDTAGHLAFGHGIHFCIGAPLARLEARI 386
Query: 479 ALANLLYK 486
A+ LL +
Sbjct: 387 AVRALLER 394
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 39/190 (20%)
Query: 310 DLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNE 369
DLT+D++ NV + G +T+ + A+ L P + ++ G +
Sbjct: 238 DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALR----------DGSADV 287
Query: 370 DDVQELHYLKAVVKETMR-LQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDP 428
D VV+E +R P + +L R + G ++P+ T V A RDP
Sbjct: 288 D---------TVVEEVLRWTSPAMHVL--RVTTADVTINGRDLPSGTPVVAWLPAANRDP 336
Query: 429 EAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELA-----LANL 483
+ +P+ F P R + I FG G C L + +EL+ LA
Sbjct: 337 AEFDDPDTFLPGR----------KPNRHITFGHGMHHC--LGSALARIELSVVLRVLAER 384
Query: 484 LYKFDWEMPP 493
+ + D E P
Sbjct: 385 VSRVDLEREP 394
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 321 MNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKA 380
+ + VAG +T A+ + W+ L+ P K+V + A
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRV-------------------AESEEAALA 256
Query: 381 VVKETMRLQPTVPLLLPREAIQKCIVEGYE-IPAKTRVFVNAWAIGRD--PEAWQNPEEF 437
+E +RL P +L R +++ ++ G + +P T + ++ + R PE E F
Sbjct: 257 AFQEALRLYPPAWILTRR--LERPLLLGEDRLPQGTTLVLSPYVTQRLYFPEG----EAF 310
Query: 438 YPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
PERF+ G+ F PFG G+R+C G + ++ + L +F
Sbjct: 311 QPERFLAERGTPSGRYF---PFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
L R A++ ++G I A V+V+ A RDPE + +P+ IDF+
Sbjct: 293 LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNP 342
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLK 496
+ FG G CPG + + EL + +L + PGLK
Sbjct: 343 HVSFGFGPHYCPGGMLARLESELLVDAVLDRV-----PGLK 378
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
L R A++ ++G I A V+V+ A RDPE + +P+ IDF+
Sbjct: 293 LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNP 342
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLK 496
+ FG G CPG + + EL + +L + PGLK
Sbjct: 343 HVSFGFGPHYCPGGMLARLESELLVDAVLDRV-----PGLK 378
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
L R A++ ++G I A V+V+ A RDPE + +P+ IDF+
Sbjct: 293 LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNP 342
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLK 496
+ FG G CPG + + EL + +L + PGLK
Sbjct: 343 HVSFGFGPHYCPGGMLARLESELLVDAVLDRV-----PGLK 378
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
L R A++ ++G I A V+V+ A RDPE + +P+ IDF+
Sbjct: 293 LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNP 342
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLK 496
+ FG G CPG + + EL + +L + PGLK
Sbjct: 343 HVSFGFGPHYCPGGMLARLESELLVDAVLDRV-----PGLK 378
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
L R A++ ++G I A V+V+ A RDPE + +P+ IDF+
Sbjct: 293 LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNP 342
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLK 496
+ FG G CPG + + EL + +L + PGLK
Sbjct: 343 HVSFGFGPHYCPGGMLARLESELLVDAVLDRV-----PGLK 378
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
L R A++ ++G I A V+V+ A RDPE + +P+ IDF+
Sbjct: 293 LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNP 342
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLK 496
+ FG G CPG + + EL + +L + PGLK
Sbjct: 343 HVSFGFGPHYCPGGMLARLESELLVDAVLDRV-----PGLK 378
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
L R A++ ++G I A V+V+ A RDPE + +P+ IDF+
Sbjct: 293 LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNP 342
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLK 496
+ FG G CPG + + EL + +L + PGLK
Sbjct: 343 HVSFGFGPHYCPGGMLARLESELLVDAVLDRV-----PGLK 378
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 355 EIRSLIGG-NKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEG----Y 409
EIR I G V + ++++ K+VV E++R++P VP + A +E +
Sbjct: 306 EIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGK-AKSNFTIESHDATF 364
Query: 410 EIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFV 443
E+ +F +DP+ + PEE+ P+RFV
Sbjct: 365 EVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFV 398
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 16/112 (14%)
Query: 378 LKAVVKETMRL---QPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNP 434
+ A V E +R+ ++PL + E I+ + G +PA V DPE + +P
Sbjct: 282 MPAAVDELLRVLSVADSIPLRVAAEDIE---LSGRTVPADDGVIALLAGANHDPEQFDDP 338
Query: 435 EEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYK 486
E +DF + + FG G C G ++ + +E+AL LL +
Sbjct: 339 ER----------VDFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRR 380
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 317 KAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDD----- 371
+A+++ ++ + A W + +L KNP A+ V+ E+ S++ + V++
Sbjct: 253 RALVLQLWATQGNMGPA-AFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQK 311
Query: 372 -VQELHYLKAVVKETMRLQPTVPLLLPREAIQKC---IVEGYEIPAK--TRVFVNAW-AI 424
+ L +V+ E++RL T + RE + + +G E + R+ + + +
Sbjct: 312 VLDSTPVLDSVLSESLRL--TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSP 369
Query: 425 GRDPEAWQNPEEFYPERFVD----SCIDFKGQNFEL----IPFGAGRRICPGLNMGIVTV 476
RDPE + +PE F RF++ DF L +P+GAG C G + + ++
Sbjct: 370 QRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSI 429
Query: 477 ELALANLLYKFDWEM 491
+ + +L D E+
Sbjct: 430 KQFVFLVLVHLDLEL 444
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 30/174 (17%)
Query: 311 LTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNED 370
L++D I +++ AG +T+ + A+ L RA + V E+R+
Sbjct: 239 LSVDGIVGTCVHLLTAGHETTTNFLAKAVLTL----RAHRDVLDELRTTPESTP------ 288
Query: 371 DVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEA 430
A V+E MR P V + R A + + ++IP +RV + RDP
Sbjct: 289 ---------AAVEELMRYDPPVQAVT-RWAYEDIRLGDHDIPRGSRVVALLGSANRDPAR 338
Query: 431 WQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLL 484
+ +P+ +D + FG G C G + E+ L LL
Sbjct: 339 FPDPD----------VLDVHRAAERQVGFGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 317 KAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDD----- 371
+A+++ ++ + A W + +L KNP A+ V+ E+ S++ + V++
Sbjct: 265 RALVLQLWATQGNMGPA-AFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQK 323
Query: 372 -VQELHYLKAVVKETMRLQPTVPLLLPREAIQKC---IVEGYEIPAK--TRVFVNAW-AI 424
+ L +V+ E++RL T + RE + + +G E + R+ + + +
Sbjct: 324 VLDSTPVLDSVLSESLRL--TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSP 381
Query: 425 GRDPEAWQNPEEFYPERFVD----SCIDFKGQNFEL----IPFGAGRRICPGLNMGIVTV 476
RDPE + +PE F RF++ DF L +P+GAG C G + + ++
Sbjct: 382 QRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSI 441
Query: 477 ELALANLLYKFDWEM 491
+ + +L D E+
Sbjct: 442 KQFVFLVLVHLDLEL 456
>pdb|1M5Y|A Chain A, Crystallographic Structure Of Sura, A Molecular Chaperone
That Facilitates Outer Membrane Porin Folding
pdb|1M5Y|B Chain B, Crystallographic Structure Of Sura, A Molecular Chaperone
That Facilitates Outer Membrane Porin Folding
pdb|1M5Y|C Chain C, Crystallographic Structure Of Sura, A Molecular Chaperone
That Facilitates Outer Membrane Porin Folding
pdb|1M5Y|D Chain D, Crystallographic Structure Of Sura, A Molecular Chaperone
That Facilitates Outer Membrane Porin Folding
Length = 408
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 127 KLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEVSRMIEKISKSVAAS 186
+L+Y+GL+ Y+ Y +IRK +I + +N+V+ I EV + +++ AS
Sbjct: 97 RLAYDGLN-----YNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDAS 151
Query: 187 KLVNLSEVMMSL 198
+NLS +++ L
Sbjct: 152 TELNLSHILIPL 163
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 12/118 (10%)
Query: 370 DDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPE 429
D V+E LKAV +E +R P V + R +K + I V V + RD E
Sbjct: 233 DYVREKGALKAV-EEALRFSPPV-MRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEE 290
Query: 430 AWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+++P+ F P+R + + FG+G +C G + + +AL KF
Sbjct: 291 VFKDPDSFIPDRTPNPH----------LSFGSGIHLCLGAPLARLEARIALEEFAKKF 338
>pdb|2PV3|A Chain A, Crystallographic Structure Of Sura Fragment Lacking The
Second Peptidyl-prolyl Isomerase Domain Complexed With
Peptide Nftlkfwdifrk
pdb|2PV3|B Chain B, Crystallographic Structure Of Sura Fragment Lacking The
Second Peptidyl-prolyl Isomerase Domain Complexed With
Peptide Nftlkfwdifrk
Length = 299
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 127 KLSYNGLDLAFSPYDEYWREIRKICVIHLLNSNKVQNFRPIREDEVSRMIEKISKSVAAS 186
+L+Y+GL+ Y+ Y +IRK +I + +N+V+ I EV + +++ AS
Sbjct: 97 RLAYDGLN-----YNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDAS 151
Query: 187 KLVNLSEVMMSL 198
+NLS +++ L
Sbjct: 152 TELNLSHILIPL 163
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 15/101 (14%)
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
L R A++ V G I A V+V+ A RDP+ + +P+ ID
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDR----------IDLDRDPNP 345
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLK 496
+ +G G C G + + EL + LL + PGL+
Sbjct: 346 HLAYGNGHHFCTGAVLARMQTELLVDTLLERL-----PGLR 381
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 11/111 (9%)
Query: 378 LKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEF 437
L +V+E +R V + R A + G +I A + +N A DP + P +F
Sbjct: 322 LPGIVEEAIRWTTPVQHFM-RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKF 380
Query: 438 YPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFD 488
P R + + FGAG C GL++ + + + L LL + D
Sbjct: 381 DPTRPANRHL----------AFGAGSHQCLGLHLARLEMRVLLDVLLDRVD 421
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 15/101 (14%)
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
L R A++ V G I A V+V+ A RDP+ + +P+ ID
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDR----------IDLDRDPNP 345
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLK 496
+ +G G C G + + EL + LL + PGL+
Sbjct: 346 HLAYGNGHHFCTGAVLARMQTELLVDTLLERL-----PGLR 381
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 77/208 (37%), Gaps = 37/208 (17%)
Query: 290 QQEDIIDVLL-QIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRA 348
Q+ D D LL I +D G V T + +K + + + G +T A + + + L NP
Sbjct: 210 QRADPDDGLLGMIVRDHGDNV--TDEELKGLCTALILGGVETVAGMIGFGVLALLDNP-- 265
Query: 349 MKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEG 408
+++L S + VV E +R V PR AI+ +++G
Sbjct: 266 -GQIELLFESPEKAER----------------VVNELVRYLSPVQAPNPRLAIKDVVIDG 308
Query: 409 YEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPG 468
I A V + RD +P+ +D + FG G C G
Sbjct: 309 QLIKAGDYVLCSILMANRDEALTPDPD----------VLDANRAAVSDVGFGHGIHYCVG 358
Query: 469 LNMGIVTVELALANLLYKFDWEMPPGLK 496
+ + +A Y+ W PGL+
Sbjct: 359 AALARSMLRMA-----YQTLWRRFPGLR 381
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 122/333 (36%), Gaps = 61/333 (18%)
Query: 165 RPIREDEVSRMIEKISKSVAASKLVNLSEVMMSLTSTIICRIGFGKRYDEDEATSARSRF 224
RP R DE + + I VA + L L + S + + G+ +D + S
Sbjct: 116 RP-RHDEQRKAVSPI---VAPANLAALEGTIRERVSKTLDGLPVGEEFDWVDRVSIEITT 171
Query: 225 QAL-------LNETQALFVSFFVTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDE 277
Q L E + L VT P G ++ + + L E ++Q L +E
Sbjct: 172 QMLATLFDFPFEERRKLTRWSDVTTAAPGGGVVESWDQRKTELL----ECAAYFQVLWNE 227
Query: 278 HL--DPNRTKSKLPQQEDIIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATV 335
+ DP D+I +L R + L N+ + + V G DT+ ++
Sbjct: 228 RVNKDPG---------NDLISMLAHSPATRNMTPEEYLGNV----LLLIVGGNDTTRNSM 274
Query: 336 VWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLL 395
+ L KNP K++ N V + +V E +R Q PL
Sbjct: 275 TGGVLALHKNPDQFAKLK--------ANPALV-----------ETMVPEIIRWQ--TPLA 313
Query: 396 -LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNF 454
+ R AI + G I +V + ++ RD E PEEF +R +
Sbjct: 314 HMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR---------PRPR 364
Query: 455 ELIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+ + FG G C G + + + + +L +F
Sbjct: 365 QHLSFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 33/177 (18%)
Query: 311 LTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNED 370
LT+D +M + + G +T+ + + + +NP + L+ RS GFV
Sbjct: 173 LTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDA-LKNRS------GFV--- 222
Query: 371 DVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEA 430
+ET+R + L R A + + +I +V V + RD
Sbjct: 223 ------------EETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETF 270
Query: 431 WQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+ P+ F G+ + FG G +C G + + +AL ++L F
Sbjct: 271 FDEPDLFKI-----------GRREMHLAFGIGIHMCLGAPLARLEASIALNDILNHF 316
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 21/130 (16%)
Query: 312 TLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLIGGNKGFVNEDD 371
T+D + + N+ G DT AA + +L ++P + ++
Sbjct: 220 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLR------------------ 261
Query: 372 VQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAW 431
+ + A E MR PTV + R A+ +G I V++ + DP ++
Sbjct: 262 -ERPDLIPAAADELMRRYPTV--AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASF 318
Query: 432 QNPEEFYPER 441
+ PEE +R
Sbjct: 319 EAPEEVRFDR 328
>pdb|1T85|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam Mutant (L358pC334A)
pdb|1T86|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
pdb|1T86|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
Length = 414
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
Query: 447 IDFKGQNFELIPFGAGRRICPGLNMGIVTVELALANLLYKFDWEMPPGLKSHDFDVLPGL 506
+DF Q FG G +CPG ++ + + L L + DF + PG
Sbjct: 338 VDFSRQKVSHTTFGHGSHLCPGQHLARREIIVTLKEWLTRIP----------DFSIAPGA 387
Query: 507 AM-HKKNVLS 515
+ HK ++S
Sbjct: 388 QIQHKSGIVS 397
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 93/257 (36%), Gaps = 42/257 (16%)
Query: 241 TDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQQEDIIDVLLQ 300
D+ F W F + QE + + +D R + +D++ L+Q
Sbjct: 176 ADHDRFTRWSGAFLSTAEVTAEEMQEAAEQAYAYMGDLIDRRRKEPT----DDLVSALVQ 231
Query: 301 IRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLI 360
R + L+ + + + + VAG + S T + YL +++ L+ LI
Sbjct: 232 ARDQQD---SLSEQELLDLAIGLLVAGYE-STTTQIADFVYLLMTRPELRRQLLDRPELI 287
Query: 361 GGNKGFVNEDDVQELHYLKAVVKETMRLQP-TVPLLLPREAIQKCIVEGYEIPAKTRVFV 419
+ V+E R P V +PR A++ + G I A V
Sbjct: 288 ------------------PSAVEELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPVLA 329
Query: 420 NAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELA 479
+ A RD + + + ID + + FG G C G + V +++A
Sbjct: 330 STGAANRDQAQFPDADR----------IDVDRTPNQHLGFGHGVHHCLGAPLARVELQVA 379
Query: 480 LANLLYKFDWEMPPGLK 496
L LL + PG++
Sbjct: 380 LEVLLQRL-----PGIR 391
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 24/152 (15%)
Query: 352 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 395
VQ+ L+ GN VN +L LKA V+E R V L
Sbjct: 230 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTAVALA 289
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
+ R A + ++ + A + + + RD E ++NP+EF R K +
Sbjct: 290 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 341
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+ FG G C ++ + + L KF
Sbjct: 342 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 24/152 (15%)
Query: 352 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 395
VQ+ L+ GN VN +L LKA V+E R V L
Sbjct: 229 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTAVALA 288
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
+ R A + ++ + A + + + RD E ++NP+EF R K +
Sbjct: 289 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 340
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+ FG G C ++ + + L KF
Sbjct: 341 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 92/257 (35%), Gaps = 42/257 (16%)
Query: 241 TDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQQEDIIDVLLQ 300
D+ F W F + QE + + +D R + +D++ L+Q
Sbjct: 176 ADHDRFTRWSGAFLSTAEVTAEEMQEAAEQAYAYMGDLIDRRRKEPT----DDLVSALVQ 231
Query: 301 IRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLI 360
R + L+ + + + + VAG + S T + YL +++ L+ LI
Sbjct: 232 ARDQQD---SLSEQELLDLAIGLLVAGYE-STTTQIADFVYLLMTRPELRRQLLDRPELI 287
Query: 361 GGNKGFVNEDDVQELHYLKAVVKETMRLQP-TVPLLLPREAIQKCIVEGYEIPAKTRVFV 419
+ V+E R P V PR A++ + G I A V
Sbjct: 288 ------------------PSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLA 329
Query: 420 NAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELA 479
+ A RD + + + ID + + FG G C G + V +++A
Sbjct: 330 STGAANRDQAQFPDADR----------IDVDRTPNQHLGFGHGVHHCLGAPLARVELQVA 379
Query: 480 LANLLYKFDWEMPPGLK 496
L LL + PG++
Sbjct: 380 LEVLLQRL-----PGIR 391
>pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp
pdb|4F96|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp
pdb|4F97|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Validoxylamine A 7'-Phosphate
pdb|4F97|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Validoxylamine A 7'-Phosphate
pdb|4F9F|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|C Chain C, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|D Chain D, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|E Chain E, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|F Chain F, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|3VDM|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase
Which Catalyzes Non-Glycosidic C-N Coupling In
Validamycin A Biosynthesis
pdb|3VDM|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase
Which Catalyzes Non-Glycosidic C-N Coupling In
Validamycin A Biosynthesis
pdb|3VDN|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp
Length = 497
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 93 FVPSLVVSSAKMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPY--DEYWR----E 146
F +++ SSA+ A + HD Q PAL+ +Q+ L P+ +YWR E
Sbjct: 138 FADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKE 197
Query: 147 IRKICVIHLLNSNKVQNF 164
IR + +L + + F
Sbjct: 198 IRTGILHGMLPATTIGFF 215
>pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form
pdb|3T5T|B Chain B, Vall From Streptomyces Hygroscopicus In Apo Form
Length = 496
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 93 FVPSLVVSSAKMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPY--DEYWR----E 146
F +++ SSA+ A + HD Q PAL+ +Q+ L P+ +YWR E
Sbjct: 137 FADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKE 196
Query: 147 IRKICVIHLLNSNKVQNF 164
IR + +L + + F
Sbjct: 197 IRTGILHGMLPATTIGFF 214
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 92/257 (35%), Gaps = 42/257 (16%)
Query: 241 TDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQQEDIIDVLLQ 300
D+ F W F + QE + + +D R + +D++ L+Q
Sbjct: 176 ADHDRFTRWSGAFLSTAEVTAEEMQEAAEQAYAYMGDLIDRRRKEPT----DDLVSALVQ 231
Query: 301 IRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQLEIRSLI 360
R + L+ + + + + VAG + S T + YL +++ L+ LI
Sbjct: 232 ARDQQD---SLSEQELLDLAIGLLVAGYE-STTTQIADFVYLLMTRPELRRQLLDRPELI 287
Query: 361 GGNKGFVNEDDVQELHYLKAVVKETMRLQP-TVPLLLPREAIQKCIVEGYEIPAKTRVFV 419
+ V+E R P V PR A++ + G I A V
Sbjct: 288 ------------------PSAVEELTRWVPLGVGTAAPRYAVEDVTLRGVTIRAGEPVLA 329
Query: 420 NAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGIVTVELA 479
+ A RD + + + ID + + FG G C G + V +++A
Sbjct: 330 STGAANRDQAQFPDADR----------IDVDRTPNQHLGFGHGVHHCLGAPLARVELQVA 379
Query: 480 LANLLYKFDWEMPPGLK 496
L LL + PG++
Sbjct: 380 LEVLLQRL-----PGIR 391
>pdb|1YDM|A Chain A, X-ray Structure Of Northeast Structural Genomics Target
Sr44
pdb|1YDM|B Chain B, X-ray Structure Of Northeast Structural Genomics Target
Sr44
pdb|1YDM|C Chain C, X-ray Structure Of Northeast Structural Genomics Target
Sr44
Length = 187
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 10/110 (9%)
Query: 132 GLDLAFSPY-DEYWREIRKICVIHLLNSNKVQNFRPIREDEVSRMIEK--ISKSVAASKL 188
GL++ P ++ W E +++C+ K FR + D+ + + + +K
Sbjct: 51 GLEIPTRPVIEQAWEEGKQVCIPKCHPDTKKXQFRTYQTDDQLETVYAGLLEPVIEKTKE 110
Query: 189 VNLSEVMMSLTSTIIC------RIGFGKRYDEDEATSARSRFQALLNETQ 232
VN S++ + + +C R+GFG Y + + + +LL E Q
Sbjct: 111 VNPSQIDLXIVPG-VCFDVNGFRVGFGGGYYDRYLSEYEGKTVSLLLECQ 159
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 24/152 (15%)
Query: 352 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 395
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 229 VQIAFLLLVAGNAAMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 288
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
+ R A + ++ + A + + + RD E ++NP+EF R K +
Sbjct: 289 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 340
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+ FG G C ++ + + L KF
Sbjct: 341 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 24/152 (15%)
Query: 352 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 395
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 230 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTATALA 289
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
+ R A + ++ + A + + + RD E ++NP+EF R K +
Sbjct: 290 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 341
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+ FG G C ++ + + L KF
Sbjct: 342 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|3TON|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|3TON|B Chain B, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|3TOP|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
pdb|3TOP|B Chain B, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
Length = 908
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 240 VTDYFPFMGWIDKFTGKMQRLQNNFQELDRFYQELIDEHLDPNRTKSKLPQQEDIIDVLL 299
VT YFP W D +TG + ++ L I+ H+ R LP QE ++ L
Sbjct: 722 VTAYFPRARWYDYYTGVDINARGEWKTLPAPLDH-INLHV---RGGYILPWQEPALNTHL 777
Query: 300 QIRKDRGFKVDL 311
+K GFK+ L
Sbjct: 778 SRQKFMGFKIAL 789
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 24/152 (15%)
Query: 352 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 395
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 229 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTATALA 288
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
+ R A + ++ + A + + + RD E ++NP+EF R K +
Sbjct: 289 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 340
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+ FG G C ++ + + L KF
Sbjct: 341 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With
Trehalose
pdb|3T7D|B Chain B, Vall From Streptomyces Hygroscopicus In Complex With
Trehalose
Length = 497
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 93 FVPSLVVSSAKMAKEILKTHDLQFCSRPALVGQQKLSYNGLDLAFSPY--DEYWR 145
F +++ SSA+ A + HD Q PAL+ +Q+ L P+ +YWR
Sbjct: 138 FADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWR 192
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 24/152 (15%)
Query: 352 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 395
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 229 VQIAFLLLVAGNANMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 288
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
+ R A + ++ + A + + + RD E ++NP+EF R K +
Sbjct: 289 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 340
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+ FG G C ++ + + L KF
Sbjct: 341 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 24/152 (15%)
Query: 352 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 395
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 229 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 288
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
+ R A + ++ + A + + + RD E ++NP+EF R K +
Sbjct: 289 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 340
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+ FG G C ++ + + L KF
Sbjct: 341 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 24/152 (15%)
Query: 352 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 395
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 230 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 289
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
+ R A + ++ + A + + + RD E ++NP+EF R K +
Sbjct: 290 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 341
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+ FG G C ++ + + L KF
Sbjct: 342 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 24/152 (15%)
Query: 352 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 395
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 231 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 290
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
+ R A + ++ + A + + + RD E ++NP+EF R K +
Sbjct: 291 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 342
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+ FG G C ++ + + L KF
Sbjct: 343 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 24/152 (15%)
Query: 352 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 395
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 230 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 289
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
+ R A + ++ + A + + + RD E ++NP+EF R K +
Sbjct: 290 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 341
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+ FG G C ++ + + L KF
Sbjct: 342 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 24/152 (15%)
Query: 352 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 395
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 229 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 288
Query: 396 LPREAIQKCIVEGYEIPAKTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFE 455
+ R A + ++ + A + + + RD E ++NP+EF R K +
Sbjct: 289 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 340
Query: 456 LIPFGAGRRICPGLNMGIVTVELALANLLYKF 487
+ FG G C ++ + + L KF
Sbjct: 341 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 31/190 (16%)
Query: 294 IIDVLLQIRKDRGFKVDLTLDNIKAVLMNVFVAGTDTSAATVVWAMTYLTKNPRAMKKVQ 353
++ LL + + G + L+ + + A+ M + +AG +T+ + + L +P +K+
Sbjct: 206 LLSSLLAVSDEDGDR--LSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKLL 262
Query: 354 LEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLLPREAIQKCIVEGYEIPA 413
E SLI + V+E +R V R + G IPA
Sbjct: 263 AEDPSLI------------------SSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPA 304
Query: 414 KTRVFVNAWAIGRDPEAWQNPEEFYPERFVDSCIDFKGQNFELIPFGAGRRICPGLNMGI 473
V + A RD + W PE P+R D D G F FG G C G +
Sbjct: 305 GEMVMLGLAAANRDAD-WM-PE---PDRL-DITRDASGGVF----FGHGIHFCLGAQLAR 354
Query: 474 VTVELALANL 483
+ +A+ L
Sbjct: 355 LEGRVAIGRL 364
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,374,613
Number of Sequences: 62578
Number of extensions: 641047
Number of successful extensions: 1896
Number of sequences better than 100.0: 171
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 1515
Number of HSP's gapped (non-prelim): 176
length of query: 523
length of database: 14,973,337
effective HSP length: 103
effective length of query: 420
effective length of database: 8,527,803
effective search space: 3581677260
effective search space used: 3581677260
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 54 (25.4 bits)