Query 009873
Match_columns 523
No_of_seqs 244 out of 2218
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 14:54:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009873.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009873hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ju2_A HydroxynitrIle lyase; f 100.0 1.6E-75 5.6E-80 620.2 38.3 466 41-521 14-520 (536)
2 3fim_B ARYL-alcohol oxidase; A 100.0 5E-75 1.7E-79 615.7 38.8 448 53-517 2-565 (566)
3 3qvp_A Glucose oxidase; oxidor 100.0 4.5E-75 1.5E-79 616.7 36.9 458 47-519 13-580 (583)
4 3q9t_A Choline dehydrogenase a 100.0 7.5E-72 2.6E-76 592.7 34.6 445 51-518 4-573 (577)
5 3t37_A Probable dehydrogenase; 100.0 4.9E-70 1.7E-74 580.8 38.4 445 51-516 15-522 (526)
6 1gpe_A Protein (glucose oxidas 100.0 7.5E-70 2.6E-74 582.0 35.7 455 49-519 20-584 (587)
7 2jbv_A Choline oxidase; alcoho 100.0 4.7E-68 1.6E-72 564.3 40.7 449 50-518 10-530 (546)
8 1kdg_A CDH, cellobiose dehydro 100.0 3.6E-58 1.2E-62 490.4 29.0 442 51-518 5-543 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 2.8E-57 9.7E-62 477.9 33.0 419 52-519 4-501 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 3.8E-57 1.3E-61 476.9 28.0 426 51-520 9-507 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 3.4E-46 1.2E-50 401.0 32.8 430 50-518 43-613 (623)
12 4at0_A 3-ketosteroid-delta4-5a 99.6 8.4E-16 2.9E-20 162.0 13.3 194 49-303 37-270 (510)
13 1qo8_A Flavocytochrome C3 fuma 99.5 1.7E-14 5.8E-19 153.9 11.8 190 50-304 118-318 (566)
14 1y0p_A Fumarate reductase flav 99.5 3.5E-14 1.2E-18 151.7 12.3 191 50-304 123-323 (571)
15 2h88_A Succinate dehydrogenase 99.4 3.7E-13 1.3E-17 143.9 13.5 55 227-299 163-218 (621)
16 2bs2_A Quinol-fumarate reducta 99.4 8.9E-13 3E-17 141.9 13.2 54 228-299 167-221 (660)
17 1d4d_A Flavocytochrome C fumar 99.4 6.9E-13 2.3E-17 141.4 11.4 59 227-303 263-323 (572)
18 2wdq_A Succinate dehydrogenase 99.4 1.1E-12 3.7E-17 140.1 11.6 56 227-299 151-207 (588)
19 4dgk_A Phytoene dehydrogenase; 99.3 2.7E-12 9.2E-17 134.9 11.8 57 227-305 229-285 (501)
20 1chu_A Protein (L-aspartate ox 99.3 2.5E-12 8.5E-17 135.9 11.2 35 51-85 6-40 (540)
21 1kf6_A Fumarate reductase flav 99.3 4.1E-11 1.4E-15 128.1 17.9 56 227-300 142-199 (602)
22 2i0z_A NAD(FAD)-utilizing dehy 99.3 1.1E-11 3.7E-16 128.3 11.3 35 51-85 24-59 (447)
23 3da1_A Glycerol-3-phosphate de 99.3 1.6E-11 5.4E-16 130.5 11.7 63 228-309 179-242 (561)
24 3dme_A Conserved exported prot 99.3 9.5E-12 3.2E-16 125.0 9.2 61 228-309 159-220 (369)
25 3gyx_A Adenylylsulfate reducta 99.2 1.3E-11 4.5E-16 132.8 9.6 52 233-299 182-234 (662)
26 3nyc_A D-arginine dehydrogenas 99.2 2.9E-11 9.8E-16 122.1 11.2 36 50-85 6-41 (381)
27 2rgh_A Alpha-glycerophosphate 99.2 1.3E-10 4.4E-15 123.7 16.4 63 227-308 196-259 (571)
28 1y56_B Sarcosine oxidase; dehy 99.2 4.6E-11 1.6E-15 120.8 9.4 35 51-85 3-38 (382)
29 1jnr_A Adenylylsulfate reducta 99.2 9E-11 3.1E-15 126.6 11.9 57 228-299 160-219 (643)
30 2qcu_A Aerobic glycerol-3-phos 99.1 4.9E-10 1.7E-14 117.6 15.4 57 228-304 158-215 (501)
31 2gag_B Heterotetrameric sarcos 99.1 8.1E-10 2.8E-14 112.4 16.2 57 228-308 183-239 (405)
32 3v76_A Flavoprotein; structura 99.1 5.7E-11 1.9E-15 121.3 6.8 37 49-85 23-60 (417)
33 2oln_A NIKD protein; flavoprot 99.1 5.3E-10 1.8E-14 113.7 13.6 34 52-85 3-37 (397)
34 3ps9_A TRNA 5-methylaminomethy 99.1 3.9E-10 1.3E-14 122.8 12.0 34 52-85 271-305 (676)
35 3dje_A Fructosyl amine: oxygen 99.0 2.3E-10 7.7E-15 118.1 7.9 37 51-87 4-42 (438)
36 2e5v_A L-aspartate oxidase; ar 99.0 2.2E-10 7.7E-15 119.1 7.2 30 55-84 1-31 (472)
37 3pvc_A TRNA 5-methylaminomethy 99.0 3.1E-10 1.1E-14 123.7 8.6 35 51-85 262-297 (689)
38 1rp0_A ARA6, thiazole biosynth 99.0 1.6E-09 5.4E-14 104.9 12.5 34 52-85 38-73 (284)
39 3axb_A Putative oxidoreductase 99.0 5.4E-10 1.9E-14 115.6 9.4 33 52-84 22-56 (448)
40 1pj5_A N,N-dimethylglycine oxi 99.0 7.8E-10 2.7E-14 123.2 10.9 57 228-308 160-216 (830)
41 1ryi_A Glycine oxidase; flavop 99.0 3.1E-10 1.1E-14 114.6 6.1 37 49-85 13-50 (382)
42 3cgv_A Geranylgeranyl reductas 99.0 2.5E-09 8.7E-14 108.4 12.1 60 228-308 111-170 (397)
43 3nlc_A Uncharacterized protein 99.0 1.6E-09 5.5E-14 113.8 10.7 36 50-85 104-140 (549)
44 3oz2_A Digeranylgeranylglycero 99.0 1.6E-09 5.3E-14 109.7 10.2 51 228-297 111-161 (397)
45 2gqf_A Hypothetical protein HI 98.9 1.6E-09 5.6E-14 110.0 8.9 33 53-85 4-37 (401)
46 3jsk_A Cypbp37 protein; octame 98.9 3.7E-09 1.3E-13 103.7 11.0 35 51-85 77-114 (344)
47 2gf3_A MSOX, monomeric sarcosi 98.9 4.3E-09 1.5E-13 106.5 11.4 33 53-85 3-36 (389)
48 3ka7_A Oxidoreductase; structu 98.9 3.6E-09 1.2E-13 108.4 10.0 54 228-304 205-258 (425)
49 3e1t_A Halogenase; flavoprotei 98.9 1.4E-09 4.8E-14 114.4 7.0 52 228-297 120-171 (512)
50 3atr_A Conserved archaeal prot 98.9 5.7E-09 1.9E-13 108.0 11.5 53 228-298 109-162 (453)
51 2uzz_A N-methyl-L-tryptophan o 98.9 3.5E-09 1.2E-13 106.5 8.9 34 53-86 2-36 (372)
52 3nix_A Flavoprotein/dehydrogen 98.8 3.5E-09 1.2E-13 108.4 6.8 34 52-85 4-38 (421)
53 3i3l_A Alkylhalidase CMLS; fla 98.7 1.1E-08 3.9E-13 108.8 8.0 51 228-297 137-187 (591)
54 3nrn_A Uncharacterized protein 98.7 2.3E-08 7.8E-13 102.4 10.0 35 55-89 2-37 (421)
55 2gmh_A Electron transfer flavo 98.7 1.8E-08 6.2E-13 107.4 8.0 37 50-86 32-75 (584)
56 2gjc_A Thiazole biosynthetic e 98.7 4.3E-08 1.5E-12 95.6 9.8 35 51-85 63-100 (326)
57 2zxi_A TRNA uridine 5-carboxym 98.7 4.3E-08 1.5E-12 103.5 10.3 34 52-85 26-60 (637)
58 3ces_A MNMG, tRNA uridine 5-ca 98.7 5.6E-08 1.9E-12 103.0 10.1 35 51-85 26-61 (651)
59 3ihg_A RDME; flavoenzyme, anth 98.7 1.4E-07 4.8E-12 99.7 13.2 35 51-85 3-38 (535)
60 3p1w_A Rabgdi protein; GDI RAB 98.6 5E-08 1.7E-12 100.3 8.9 41 49-89 16-57 (475)
61 2qa1_A PGAE, polyketide oxygen 98.6 1.7E-07 5.8E-12 98.0 12.6 38 48-85 6-44 (500)
62 3c4n_A Uncharacterized protein 98.6 3.4E-08 1.2E-12 100.6 6.8 35 51-85 34-71 (405)
63 2cul_A Glucose-inhibited divis 98.6 1.3E-07 4.3E-12 88.5 9.9 33 53-85 3-36 (232)
64 1yvv_A Amine oxidase, flavin-c 98.6 8.7E-08 3E-12 94.7 9.1 33 53-85 2-35 (336)
65 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 3.2E-08 1.1E-12 98.3 5.7 32 54-85 2-37 (342)
66 3rp8_A Flavoprotein monooxygen 98.6 1.1E-07 3.9E-12 96.7 9.9 39 47-85 17-56 (407)
67 2bry_A NEDD9 interacting prote 98.6 4.2E-08 1.4E-12 102.6 5.5 36 50-85 89-125 (497)
68 3cp8_A TRNA uridine 5-carboxym 98.5 1.1E-07 3.8E-12 100.7 8.6 37 49-85 17-54 (641)
69 2qa2_A CABE, polyketide oxygen 98.5 2.7E-07 9.3E-12 96.4 11.5 37 49-85 8-45 (499)
70 3fmw_A Oxygenase; mithramycin, 98.5 9.5E-08 3.3E-12 101.4 6.6 36 51-86 47-83 (570)
71 3cty_A Thioredoxin reductase; 98.5 7.7E-07 2.6E-11 87.2 12.6 62 229-308 200-262 (319)
72 2x3n_A Probable FAD-dependent 98.5 2.3E-07 8E-12 94.1 8.6 34 52-85 5-39 (399)
73 1k0i_A P-hydroxybenzoate hydro 98.5 4.9E-08 1.7E-12 98.9 3.4 33 53-85 2-35 (394)
74 3f8d_A Thioredoxin reductase ( 98.5 4.8E-06 1.7E-10 81.3 17.6 62 228-308 199-261 (323)
75 4a9w_A Monooxygenase; baeyer-v 98.4 1.6E-07 5.4E-12 93.4 6.1 33 53-85 3-36 (357)
76 2r0c_A REBC; flavin adenine di 98.4 1.3E-06 4.3E-11 92.6 12.4 34 52-85 25-59 (549)
77 2vou_A 2,6-dihydroxypyridine h 98.4 1.3E-06 4.6E-11 88.4 12.0 34 52-85 4-38 (397)
78 4ap3_A Steroid monooxygenase; 98.4 3.9E-07 1.3E-11 96.2 8.2 36 50-85 18-54 (549)
79 1w4x_A Phenylacetone monooxyge 98.4 5.3E-07 1.8E-11 95.3 8.8 35 51-85 14-49 (542)
80 3gwf_A Cyclohexanone monooxyge 98.4 5.5E-07 1.9E-11 94.9 8.5 34 52-85 7-42 (540)
81 3kkj_A Amine oxidase, flavin-c 98.4 1.3E-07 4.5E-12 89.8 3.4 35 53-87 2-37 (336)
82 3itj_A Thioredoxin reductase 1 98.3 1.7E-06 5.8E-11 85.2 10.5 37 49-85 18-55 (338)
83 3s5w_A L-ornithine 5-monooxyge 98.3 2.6E-06 8.9E-11 88.1 11.6 34 52-85 29-68 (463)
84 3lxd_A FAD-dependent pyridine 98.3 2.1E-06 7E-11 87.6 10.5 60 228-309 203-262 (415)
85 3r9u_A Thioredoxin reductase; 98.3 6.5E-06 2.2E-10 80.1 13.6 56 229-302 193-248 (315)
86 2xdo_A TETX2 protein; tetracyc 98.3 2.4E-06 8.3E-11 86.5 10.8 35 51-85 24-59 (398)
87 3lzw_A Ferredoxin--NADP reduct 98.3 6.6E-07 2.3E-11 88.0 5.5 34 52-85 6-40 (332)
88 2dkh_A 3-hydroxybenzoate hydro 98.2 1.5E-06 5.2E-11 93.6 8.5 35 51-85 30-66 (639)
89 2zbw_A Thioredoxin reductase; 98.2 1.4E-06 4.9E-11 85.8 7.6 34 52-85 4-38 (335)
90 3l8k_A Dihydrolipoyl dehydroge 98.2 3.2E-06 1.1E-10 87.6 10.4 34 52-85 3-37 (466)
91 3alj_A 2-methyl-3-hydroxypyrid 98.2 2.6E-06 9E-11 85.7 9.2 33 53-85 11-44 (379)
92 2xve_A Flavin-containing monoo 98.2 6.8E-06 2.3E-10 85.0 12.1 33 54-86 3-42 (464)
93 4gcm_A TRXR, thioredoxin reduc 98.2 5.5E-07 1.9E-11 88.0 3.4 35 51-85 4-39 (312)
94 3ab1_A Ferredoxin--NADP reduct 98.2 4.7E-06 1.6E-10 83.1 10.2 35 51-85 12-47 (360)
95 3uox_A Otemo; baeyer-villiger 98.2 2.7E-06 9.1E-11 89.8 8.2 34 52-85 8-42 (545)
96 4gde_A UDP-galactopyranose mut 98.2 6.9E-07 2.4E-11 93.7 3.3 39 51-89 8-48 (513)
97 4fk1_A Putative thioredoxin re 98.1 7.6E-07 2.6E-11 86.7 3.2 34 52-85 5-39 (304)
98 2bcg_G Secretory pathway GDP d 98.1 1.1E-06 3.6E-11 90.8 4.0 40 50-89 8-48 (453)
99 2gv8_A Monooxygenase; FMO, FAD 98.1 9.8E-06 3.4E-10 83.4 11.1 36 52-87 5-43 (447)
100 2q0l_A TRXR, thioredoxin reduc 98.1 1.2E-05 4.2E-10 78.1 11.2 31 54-84 2-34 (311)
101 3fpz_A Thiazole biosynthetic e 98.1 1.3E-06 4.5E-11 86.0 4.2 35 51-85 63-100 (326)
102 3fg2_P Putative rubredoxin red 98.1 2.4E-05 8E-10 79.4 13.6 60 228-309 193-252 (404)
103 4gut_A Lysine-specific histone 98.1 1.3E-05 4.3E-10 87.8 12.2 38 51-88 334-372 (776)
104 4a5l_A Thioredoxin reductase; 98.1 1.2E-06 4E-11 85.6 3.1 34 52-85 3-37 (314)
105 1fl2_A Alkyl hydroperoxide red 98.1 1.1E-05 3.6E-10 78.5 9.7 31 53-83 1-32 (310)
106 3k7m_X 6-hydroxy-L-nicotine ox 98.0 1.8E-06 6E-11 88.5 3.2 34 54-87 2-36 (431)
107 3iwa_A FAD-dependent pyridine 98.0 5.2E-05 1.8E-09 78.5 13.9 59 228-309 211-269 (472)
108 1c0p_A D-amino acid oxidase; a 98.0 2.8E-06 9.5E-11 84.9 3.9 35 51-85 4-39 (363)
109 3g3e_A D-amino-acid oxidase; F 98.0 3.8E-06 1.3E-10 83.5 4.0 31 55-85 2-39 (351)
110 2pyx_A Tryptophan halogenase; 98.0 2E-05 6.7E-10 83.0 9.6 34 52-85 6-52 (526)
111 1hyu_A AHPF, alkyl hydroperoxi 97.9 2.6E-05 8.9E-10 81.8 9.8 35 50-84 209-244 (521)
112 3hdq_A UDP-galactopyranose mut 97.9 6.4E-06 2.2E-10 82.9 3.8 39 50-88 26-65 (397)
113 3o0h_A Glutathione reductase; 97.8 6.3E-06 2.1E-10 85.8 3.5 35 51-85 24-59 (484)
114 1i8t_A UDP-galactopyranose mut 97.8 7.3E-06 2.5E-10 82.0 3.7 36 53-88 1-37 (367)
115 3urh_A Dihydrolipoyl dehydroge 97.8 4.7E-06 1.6E-10 87.0 1.9 34 52-85 24-58 (491)
116 3i6d_A Protoporphyrinogen oxid 97.8 6.4E-06 2.2E-10 85.1 3.0 36 53-88 5-47 (470)
117 1v0j_A UDP-galactopyranose mut 97.8 1E-05 3.4E-10 82.0 3.9 39 51-89 5-45 (399)
118 3qfa_A Thioredoxin reductase 1 97.8 9.5E-06 3.3E-10 85.2 3.3 38 48-85 27-65 (519)
119 3lad_A Dihydrolipoamide dehydr 97.8 1.1E-05 3.6E-10 83.9 3.5 34 52-85 2-36 (476)
120 1s3e_A Amine oxidase [flavin-c 97.8 1E-05 3.6E-10 84.9 3.5 37 52-88 3-40 (520)
121 1rsg_A FMS1 protein; FAD bindi 97.8 9.2E-06 3.1E-10 85.3 2.9 38 52-89 7-46 (516)
122 1y56_A Hypothetical protein PH 97.8 6.5E-05 2.2E-09 78.3 9.4 35 51-85 106-140 (493)
123 2jae_A L-amino acid oxidase; o 97.7 1.3E-05 4.4E-10 83.5 4.0 39 51-89 9-48 (489)
124 3ef6_A Toluene 1,2-dioxygenase 97.7 4.9E-05 1.7E-09 77.2 8.1 59 228-309 194-252 (410)
125 2vvm_A Monoamine oxidase N; FA 97.7 1.3E-05 4.5E-10 83.6 3.8 39 51-89 37-76 (495)
126 2ivd_A PPO, PPOX, protoporphyr 97.7 1.2E-05 4.2E-10 83.3 3.4 40 50-89 13-53 (478)
127 3dk9_A Grase, GR, glutathione 97.7 1E-05 3.6E-10 84.0 2.9 35 51-85 18-53 (478)
128 4dna_A Probable glutathione re 97.7 1.4E-05 4.8E-10 82.7 3.7 34 52-85 4-38 (463)
129 2b9w_A Putative aminooxidase; 97.7 1.5E-05 5.1E-10 81.3 3.9 38 52-89 5-44 (424)
130 3dgz_A Thioredoxin reductase 2 97.7 9.7E-06 3.3E-10 84.4 2.3 35 51-85 4-39 (488)
131 2e1m_A L-glutamate oxidase; L- 97.7 1.7E-05 5.9E-10 79.1 3.8 36 51-86 42-79 (376)
132 4b1b_A TRXR, thioredoxin reduc 97.7 9.9E-06 3.4E-10 85.1 2.1 34 52-85 41-75 (542)
133 3ic9_A Dihydrolipoamide dehydr 97.7 1.2E-05 4.2E-10 83.8 2.8 34 52-85 7-41 (492)
134 1pn0_A Phenol 2-monooxygenase; 97.7 8.5E-05 2.9E-09 80.2 9.2 34 52-85 7-46 (665)
135 3nks_A Protoporphyrinogen oxid 97.7 1.8E-05 6.1E-10 82.0 3.6 34 54-87 3-39 (477)
136 3c96_A Flavin-containing monoo 97.7 1.7E-05 5.7E-10 80.6 3.2 34 52-85 3-38 (410)
137 2yg5_A Putrescine oxidase; oxi 97.7 1.6E-05 5.4E-10 81.9 3.0 38 52-89 4-42 (453)
138 1d5t_A Guanine nucleotide diss 97.6 2.4E-05 8.1E-10 80.2 4.1 40 51-90 4-44 (433)
139 4b63_A L-ornithine N5 monooxyg 97.6 0.00021 7.1E-09 74.5 11.0 37 49-85 35-72 (501)
140 2q7v_A Thioredoxin reductase; 97.6 2.3E-05 8E-10 76.7 3.3 34 52-85 7-41 (325)
141 3dgh_A TRXR-1, thioredoxin red 97.6 2.3E-05 7.9E-10 81.5 3.2 34 51-84 7-41 (483)
142 3lov_A Protoporphyrinogen oxid 97.6 2.9E-05 1E-09 80.4 3.7 35 53-87 4-41 (475)
143 3fbs_A Oxidoreductase; structu 97.6 2.9E-05 9.8E-10 74.7 3.2 33 53-85 2-35 (297)
144 2ywl_A Thioredoxin reductase r 97.6 3.2E-05 1.1E-09 68.7 3.2 32 54-85 2-34 (180)
145 1sez_A Protoporphyrinogen oxid 97.6 3.5E-05 1.2E-09 80.5 3.9 39 51-89 11-50 (504)
146 3ihm_A Styrene monooxygenase A 97.5 2.5E-05 8.7E-10 79.9 2.7 33 53-85 22-55 (430)
147 2r9z_A Glutathione amide reduc 97.5 3.5E-05 1.2E-09 79.6 3.4 34 52-85 3-37 (463)
148 1ges_A Glutathione reductase; 97.5 3.7E-05 1.3E-09 79.2 3.3 34 52-85 3-37 (450)
149 2bi7_A UDP-galactopyranose mut 97.5 4.9E-05 1.7E-09 76.5 4.0 36 53-88 3-39 (384)
150 1mo9_A ORF3; nucleotide bindin 97.5 5E-05 1.7E-09 79.8 4.0 64 228-309 264-328 (523)
151 2hqm_A GR, grase, glutathione 97.5 4.2E-05 1.4E-09 79.4 3.3 34 52-85 10-44 (479)
152 4dsg_A UDP-galactopyranose mut 97.5 5.4E-05 1.8E-09 78.7 3.9 38 51-88 7-46 (484)
153 1ojt_A Surface protein; redox- 97.5 3.8E-05 1.3E-09 79.8 2.7 35 52-86 5-40 (482)
154 1zk7_A HGII, reductase, mercur 97.5 5E-05 1.7E-09 78.5 3.6 34 52-85 3-37 (467)
155 1dxl_A Dihydrolipoamide dehydr 97.5 6E-05 2E-09 78.0 4.2 36 52-87 5-41 (470)
156 2qae_A Lipoamide, dihydrolipoy 97.5 4.8E-05 1.6E-09 78.7 3.3 34 53-86 2-36 (468)
157 1v59_A Dihydrolipoamide dehydr 97.5 3.8E-05 1.3E-09 79.7 2.4 34 52-85 4-38 (478)
158 2yqu_A 2-oxoglutarate dehydrog 97.4 5E-05 1.7E-09 78.3 3.2 34 53-86 1-35 (455)
159 3d1c_A Flavin-containing putat 97.4 5E-05 1.7E-09 75.7 3.1 33 53-85 4-38 (369)
160 1onf_A GR, grase, glutathione 97.4 5.5E-05 1.9E-09 79.0 3.4 33 53-85 2-35 (500)
161 1ebd_A E3BD, dihydrolipoamide 97.4 5.5E-05 1.9E-09 78.0 3.1 34 52-85 2-36 (455)
162 1zmd_A Dihydrolipoyl dehydroge 97.4 5.8E-05 2E-09 78.2 3.2 35 52-86 5-40 (474)
163 3g5s_A Methylenetetrahydrofola 97.4 6.4E-05 2.2E-09 74.3 3.1 33 54-86 2-35 (443)
164 1trb_A Thioredoxin reductase; 97.4 5.4E-05 1.8E-09 73.8 2.6 33 52-84 4-37 (320)
165 2a87_A TRXR, TR, thioredoxin r 97.4 5.3E-05 1.8E-09 74.6 2.5 34 51-84 12-46 (335)
166 2aqj_A Tryptophan halogenase, 97.4 7.8E-05 2.7E-09 78.6 3.7 35 52-86 4-42 (538)
167 2iid_A L-amino-acid oxidase; f 97.4 7.9E-05 2.7E-09 77.7 3.7 39 51-89 31-70 (498)
168 2a8x_A Dihydrolipoyl dehydroge 97.4 6.7E-05 2.3E-09 77.5 2.9 33 53-85 3-36 (464)
169 1vdc_A NTR, NADPH dependent th 97.3 5.9E-05 2E-09 74.0 2.3 32 52-83 7-39 (333)
170 1lvl_A Dihydrolipoamide dehydr 97.3 7.8E-05 2.7E-09 76.9 3.2 34 52-85 4-38 (458)
171 2eq6_A Pyruvate dehydrogenase 97.3 9.6E-05 3.3E-09 76.3 3.2 33 53-85 6-39 (464)
172 3k30_A Histamine dehydrogenase 97.3 0.00012 4.3E-09 79.4 4.2 38 50-87 388-426 (690)
173 1b37_A Protein (polyamine oxid 97.3 0.0001 3.4E-09 76.4 3.2 37 52-88 3-41 (472)
174 4hb9_A Similarities with proba 97.3 0.00012 4E-09 73.9 3.6 31 55-85 3-34 (412)
175 1vg0_A RAB proteins geranylger 97.2 0.00015 5.1E-09 76.9 3.7 40 51-90 6-46 (650)
176 3c4a_A Probable tryptophan hyd 97.2 0.00013 4.6E-09 73.1 3.2 32 55-86 2-36 (381)
177 2e4g_A Tryptophan halogenase; 97.2 0.00018 6E-09 76.0 4.3 35 52-86 24-62 (550)
178 2vdc_G Glutamate synthase [NAD 97.2 0.00018 6E-09 74.1 4.1 37 51-87 120-157 (456)
179 2weu_A Tryptophan 5-halogenase 97.2 0.00011 3.6E-09 77.0 2.4 34 53-86 2-39 (511)
180 1fec_A Trypanothione reductase 97.2 0.00015 5.3E-09 75.3 3.6 31 52-82 2-34 (490)
181 2x8g_A Thioredoxin glutathione 97.2 0.00014 4.8E-09 77.7 3.0 34 51-84 105-139 (598)
182 2wpf_A Trypanothione reductase 97.2 0.00016 5.5E-09 75.3 3.2 32 52-83 6-39 (495)
183 1xdi_A RV3303C-LPDA; reductase 97.1 0.00018 6.2E-09 75.0 3.1 33 53-85 2-38 (499)
184 2v3a_A Rubredoxin reductase; a 97.1 0.00026 9E-09 71.0 3.5 34 52-85 3-39 (384)
185 1q1r_A Putidaredoxin reductase 97.0 0.0003 1E-08 71.8 3.5 60 228-309 200-261 (431)
186 1ps9_A 2,4-dienoyl-COA reducta 97.0 0.00043 1.5E-08 74.9 4.5 37 51-87 371-408 (671)
187 2bc0_A NADH oxidase; flavoprot 97.0 0.00029 9.9E-09 73.3 2.9 34 53-86 35-72 (490)
188 2v3a_A Rubredoxin reductase; a 97.0 0.004 1.4E-07 62.3 11.2 32 54-85 146-178 (384)
189 1xhc_A NADH oxidase /nitrite r 97.0 0.00034 1.2E-08 69.8 3.3 33 53-86 8-41 (367)
190 1o94_A Tmadh, trimethylamine d 96.9 0.00044 1.5E-08 75.5 4.2 37 51-87 387-424 (729)
191 2cdu_A NADPH oxidase; flavoenz 96.9 0.00036 1.2E-08 71.7 3.3 33 54-86 1-36 (452)
192 2z3y_A Lysine-specific histone 96.9 0.00045 1.5E-08 74.6 3.7 39 51-89 105-144 (662)
193 2gqw_A Ferredoxin reductase; f 96.9 0.00048 1.6E-08 69.8 3.5 35 52-86 6-43 (408)
194 2gag_A Heterotetrameric sarcos 96.8 0.00041 1.4E-08 78.1 3.1 36 52-87 127-163 (965)
195 1m6i_A Programmed cell death p 96.8 0.00051 1.7E-08 71.4 3.6 59 228-309 235-293 (493)
196 1fl2_A Alkyl hydroperoxide red 96.8 0.005 1.7E-07 59.3 10.4 54 232-303 193-247 (310)
197 2xag_A Lysine-specific histone 96.8 0.00073 2.5E-08 74.5 4.2 39 51-89 276-315 (852)
198 3ab1_A Ferredoxin--NADP reduct 96.8 0.0075 2.6E-07 59.6 11.3 59 231-307 214-272 (360)
199 3oc4_A Oxidoreductase, pyridin 96.8 0.00059 2E-08 70.1 3.2 34 54-87 3-39 (452)
200 3cgb_A Pyridine nucleotide-dis 96.7 0.00059 2E-08 70.7 3.2 35 53-87 36-73 (480)
201 3kd9_A Coenzyme A disulfide re 96.7 0.00065 2.2E-08 69.7 3.4 35 53-87 3-40 (449)
202 1nhp_A NADH peroxidase; oxidor 96.7 0.00065 2.2E-08 69.7 3.3 33 54-86 1-36 (447)
203 1q1r_A Putidaredoxin reductase 96.7 0.0032 1.1E-07 64.2 8.2 31 55-85 151-182 (431)
204 1trb_A Thioredoxin reductase; 96.7 0.0059 2E-07 59.1 9.7 54 231-302 196-251 (320)
205 1lqt_A FPRA; NADP+ derivative, 96.7 0.00084 2.9E-08 69.0 3.7 35 53-87 3-45 (456)
206 1cjc_A Protein (adrenodoxin re 96.7 0.00089 3E-08 68.9 3.7 36 52-87 5-43 (460)
207 1mo9_A ORF3; nucleotide bindin 96.7 0.011 3.9E-07 61.7 12.2 32 54-85 215-247 (523)
208 3h8l_A NADH oxidase; membrane 96.6 0.00095 3.2E-08 67.5 3.2 32 55-86 3-38 (409)
209 3h28_A Sulfide-quinone reducta 96.6 0.00094 3.2E-08 68.1 3.2 33 54-86 3-38 (430)
210 1gte_A Dihydropyrimidine dehyd 96.6 0.001 3.5E-08 75.3 3.8 36 52-87 186-223 (1025)
211 2eq6_A Pyruvate dehydrogenase 96.6 0.013 4.6E-07 60.1 11.8 32 54-85 170-202 (464)
212 3sx6_A Sulfide-quinone reducta 96.5 0.0015 5E-08 66.8 4.4 33 54-86 5-41 (437)
213 3ics_A Coenzyme A-disulfide re 96.5 0.0011 3.9E-08 70.4 3.5 36 52-87 35-73 (588)
214 2q0l_A TRXR, thioredoxin reduc 96.5 0.012 4.1E-07 56.7 10.1 56 231-304 191-247 (311)
215 2yqu_A 2-oxoglutarate dehydrog 96.4 0.011 3.7E-07 60.6 10.2 32 54-85 168-200 (455)
216 1nhp_A NADH peroxidase; oxidor 96.4 0.0095 3.2E-07 60.9 9.7 34 52-85 148-182 (447)
217 2qae_A Lipoamide, dihydrolipoy 96.3 0.011 3.7E-07 60.9 9.5 31 55-85 176-207 (468)
218 3ayj_A Pro-enzyme of L-phenyla 96.3 0.0014 4.8E-08 70.4 2.9 34 52-85 55-97 (721)
219 3ic9_A Dihydrolipoamide dehydr 96.3 0.012 4E-07 61.0 9.4 31 55-85 176-207 (492)
220 1v59_A Dihydrolipoamide dehydr 96.3 0.0084 2.9E-07 61.9 8.2 32 54-85 184-216 (478)
221 1hyu_A AHPF, alkyl hydroperoxi 96.2 0.013 4.6E-07 61.1 9.7 54 232-303 404-458 (521)
222 3urh_A Dihydrolipoyl dehydroge 96.2 0.016 5.4E-07 60.0 10.2 31 55-85 200-231 (491)
223 1ebd_A E3BD, dihydrolipoamide 96.2 0.0099 3.4E-07 60.9 8.4 32 54-85 171-203 (455)
224 4eqs_A Coenzyme A disulfide re 96.2 0.0029 9.8E-08 64.6 4.0 31 56-86 3-36 (437)
225 2q7v_A Thioredoxin reductase; 96.1 0.024 8.4E-07 54.9 10.4 53 231-302 200-253 (325)
226 3ntd_A FAD-dependent pyridine 96.1 0.0023 7.8E-08 67.7 3.1 34 54-87 2-38 (565)
227 2zbw_A Thioredoxin reductase; 96.1 0.025 8.5E-07 55.0 10.5 31 55-85 154-185 (335)
228 1ges_A Glutathione reductase; 96.1 0.016 5.3E-07 59.3 9.1 31 55-85 169-200 (450)
229 1vdc_A NTR, NADPH dependent th 96.1 0.03 1E-06 54.4 10.7 56 231-302 207-263 (333)
230 3vrd_B FCCB subunit, flavocyto 95.9 0.0034 1.2E-07 63.1 3.2 58 228-309 211-268 (401)
231 3cgb_A Pyridine nucleotide-dis 95.9 0.0045 1.5E-07 64.0 4.1 33 53-85 186-219 (480)
232 3dgh_A TRXR-1, thioredoxin red 95.9 0.022 7.5E-07 58.8 9.3 55 231-303 239-294 (483)
233 2cdu_A NADPH oxidase; flavoenz 95.9 0.015 5.1E-07 59.5 7.9 31 55-85 151-182 (452)
234 1zmd_A Dihydrolipoyl dehydroge 95.9 0.052 1.8E-06 55.8 12.0 31 55-85 180-211 (474)
235 3dgz_A Thioredoxin reductase 2 95.8 0.024 8.1E-07 58.6 9.3 54 231-302 237-291 (488)
236 2gqw_A Ferredoxin reductase; f 95.8 0.018 6.1E-07 58.1 8.1 32 54-85 146-178 (408)
237 1ojt_A Surface protein; redox- 95.8 0.023 7.9E-07 58.6 9.1 31 55-85 187-218 (482)
238 2hqm_A GR, grase, glutathione 95.8 0.017 5.9E-07 59.6 7.9 31 55-85 187-218 (479)
239 2a8x_A Dihydrolipoyl dehydroge 95.8 0.046 1.6E-06 56.0 11.1 31 55-85 173-204 (464)
240 3ntd_A FAD-dependent pyridine 95.7 0.036 1.2E-06 58.3 10.4 31 55-85 153-184 (565)
241 4g6h_A Rotenone-insensitive NA 95.7 0.0053 1.8E-07 63.8 3.8 34 52-85 41-75 (502)
242 3klj_A NAD(FAD)-dependent dehy 95.7 0.0052 1.8E-07 61.5 3.6 35 52-86 8-43 (385)
243 2r9z_A Glutathione amide reduc 95.7 0.049 1.7E-06 55.8 11.0 31 55-85 168-199 (463)
244 3s5w_A L-ornithine 5-monooxyge 95.7 0.056 1.9E-06 55.3 11.3 33 53-85 227-262 (463)
245 2bc0_A NADH oxidase; flavoprot 95.7 0.034 1.2E-06 57.5 9.6 31 55-85 196-227 (490)
246 1dxl_A Dihydrolipoamide dehydr 95.6 0.031 1.1E-06 57.4 9.1 31 55-85 179-210 (470)
247 1xdi_A RV3303C-LPDA; reductase 95.6 0.019 6.3E-07 59.6 7.2 31 55-85 184-215 (499)
248 1onf_A GR, grase, glutathione 95.5 0.036 1.2E-06 57.5 9.1 31 55-85 178-209 (500)
249 3hyw_A Sulfide-quinone reducta 95.4 0.0067 2.3E-07 61.7 3.1 58 228-309 209-266 (430)
250 3oc4_A Oxidoreductase, pyridin 95.4 0.041 1.4E-06 56.2 9.1 31 55-85 149-180 (452)
251 1m6i_A Programmed cell death p 95.3 0.04 1.4E-06 57.0 8.6 31 55-85 182-217 (493)
252 3lzw_A Ferredoxin--NADP reduct 95.3 0.042 1.4E-06 53.1 8.2 31 55-85 156-187 (332)
253 3dk9_A Grase, GR, glutathione 95.2 0.086 2.9E-06 54.2 10.8 31 55-85 189-220 (478)
254 2a87_A TRXR, TR, thioredoxin r 95.1 0.08 2.7E-06 51.5 9.6 32 54-85 156-188 (335)
255 3o0h_A Glutathione reductase; 95.0 0.089 3E-06 54.2 10.2 32 54-85 192-224 (484)
256 4dna_A Probable glutathione re 95.0 0.024 8.4E-07 58.1 5.8 32 54-85 171-203 (463)
257 3lad_A Dihydrolipoamide dehydr 95.0 0.14 4.9E-06 52.5 11.7 31 55-85 182-213 (476)
258 3ics_A Coenzyme A-disulfide re 94.9 0.078 2.7E-06 56.1 9.6 31 55-85 189-220 (588)
259 1fec_A Trypanothione reductase 94.9 0.042 1.4E-06 56.8 7.3 56 231-308 243-300 (490)
260 1zk7_A HGII, reductase, mercur 94.8 0.045 1.6E-06 56.1 7.3 31 55-85 178-209 (467)
261 3qfa_A Thioredoxin reductase 1 94.8 0.13 4.4E-06 53.6 10.7 30 55-84 212-242 (519)
262 3l8k_A Dihydrolipoyl dehydroge 94.7 0.065 2.2E-06 55.0 8.2 31 55-85 174-205 (466)
263 2wpf_A Trypanothione reductase 94.6 0.1 3.5E-06 53.9 9.5 57 230-308 246-304 (495)
264 2x8g_A Thioredoxin glutathione 94.0 0.19 6.5E-06 53.2 10.1 30 55-84 288-318 (598)
265 4b1b_A TRXR, thioredoxin reduc 93.9 0.19 6.5E-06 52.4 9.7 31 55-85 225-256 (542)
266 2gag_A Heterotetrameric sarcos 93.9 0.26 8.7E-06 55.4 11.3 59 231-307 328-392 (965)
267 1gte_A Dihydropyrimidine dehyd 93.1 0.14 4.8E-06 57.9 7.6 31 55-85 334-366 (1025)
268 4g6h_A Rotenone-insensitive NA 92.9 0.17 6E-06 52.3 7.5 31 55-85 219-264 (502)
269 3fwz_A Inner membrane protein 92.1 0.1 3.5E-06 43.6 3.6 31 55-85 9-40 (140)
270 2g1u_A Hypothetical protein TM 92.0 0.087 3E-06 44.9 3.1 32 54-85 20-52 (155)
271 3llv_A Exopolyphosphatase-rela 91.9 0.087 3E-06 44.0 2.9 31 55-85 8-39 (141)
272 4gcm_A TRXR, thioredoxin reduc 91.8 0.092 3.1E-06 50.4 3.4 31 55-85 147-178 (312)
273 1lss_A TRK system potassium up 91.6 0.1 3.5E-06 43.2 3.1 31 55-85 6-37 (140)
274 3klj_A NAD(FAD)-dependent dehy 91.3 0.1 3.4E-06 52.1 3.1 32 55-86 148-180 (385)
275 1id1_A Putative potassium chan 90.8 0.13 4.3E-06 43.8 2.9 30 55-84 5-35 (153)
276 1lvl_A Dihydrolipoamide dehydr 90.6 0.12 4.2E-06 52.7 3.1 31 55-85 173-204 (458)
277 3k30_A Histamine dehydrogenase 90.3 0.57 2E-05 50.5 8.2 31 55-85 525-558 (690)
278 4a5l_A Thioredoxin reductase; 90.2 0.16 5.5E-06 48.6 3.4 31 55-85 154-185 (314)
279 3ic5_A Putative saccharopine d 89.6 0.19 6.4E-06 40.1 2.8 31 55-85 7-39 (118)
280 1xhc_A NADH oxidase /nitrite r 89.5 0.15 5.2E-06 50.4 2.6 32 54-85 144-176 (367)
281 2hmt_A YUAA protein; RCK, KTN, 89.2 0.19 6.5E-06 41.7 2.7 31 55-85 8-39 (144)
282 3d1c_A Flavin-containing putat 87.1 0.29 1E-05 47.9 3.0 31 55-85 168-199 (369)
283 3hn2_A 2-dehydropantoate 2-red 86.9 0.43 1.5E-05 45.9 3.9 31 55-85 4-35 (312)
284 2xve_A Flavin-containing monoo 86.9 0.4 1.4E-05 48.9 3.9 31 55-85 199-230 (464)
285 3l4b_C TRKA K+ channel protien 86.7 0.27 9.4E-06 44.4 2.3 30 56-85 3-33 (218)
286 2gv8_A Monooxygenase; FMO, FAD 86.6 0.35 1.2E-05 49.1 3.3 31 55-85 214-246 (447)
287 4eqs_A Coenzyme A disulfide re 86.0 0.41 1.4E-05 48.5 3.3 31 55-85 149-180 (437)
288 3i83_A 2-dehydropantoate 2-red 86.0 0.41 1.4E-05 46.2 3.2 31 55-85 4-35 (320)
289 4fk1_A Putative thioredoxin re 85.8 0.78 2.7E-05 43.6 5.1 31 55-85 148-180 (304)
290 3ado_A Lambda-crystallin; L-gu 85.7 0.37 1.3E-05 46.3 2.7 31 55-85 8-39 (319)
291 3kd9_A Coenzyme A disulfide re 85.4 0.44 1.5E-05 48.3 3.3 31 55-85 150-181 (449)
292 3uox_A Otemo; baeyer-villiger 85.4 0.49 1.7E-05 49.4 3.6 32 55-86 187-219 (545)
293 3gwf_A Cyclohexanone monooxyge 85.1 0.51 1.8E-05 49.2 3.6 32 55-86 180-212 (540)
294 3ef6_A Toluene 1,2-dioxygenase 84.8 0.48 1.6E-05 47.5 3.1 32 54-85 144-176 (410)
295 4ap3_A Steroid monooxygenase; 84.4 0.54 1.8E-05 49.2 3.4 32 55-86 193-225 (549)
296 4g65_A TRK system potassium up 84.2 0.48 1.6E-05 48.3 2.9 31 55-85 5-36 (461)
297 3dfz_A SIRC, precorrin-2 dehyd 84.1 0.6 2E-05 42.4 3.1 30 55-84 33-63 (223)
298 3g17_A Similar to 2-dehydropan 84.0 0.48 1.6E-05 45.1 2.6 31 55-85 4-35 (294)
299 3oj0_A Glutr, glutamyl-tRNA re 83.9 0.59 2E-05 39.0 2.9 31 55-85 23-54 (144)
300 1kyq_A Met8P, siroheme biosynt 83.9 0.45 1.5E-05 44.7 2.3 30 55-84 15-45 (274)
301 1f0y_A HCDH, L-3-hydroxyacyl-C 83.8 0.63 2.1E-05 44.4 3.4 31 55-85 17-48 (302)
302 4e12_A Diketoreductase; oxidor 83.6 0.57 2E-05 44.3 3.0 31 55-85 6-37 (283)
303 3c85_A Putative glutathione-re 83.5 0.62 2.1E-05 40.6 3.0 31 55-85 41-73 (183)
304 1jw9_B Molybdopterin biosynthe 83.3 0.62 2.1E-05 43.2 3.0 32 54-85 32-65 (249)
305 3ghy_A Ketopantoate reductase 82.7 0.6 2.1E-05 45.3 2.8 30 55-84 5-35 (335)
306 3cty_A Thioredoxin reductase; 82.6 0.75 2.6E-05 44.0 3.4 31 55-85 157-188 (319)
307 1ks9_A KPA reductase;, 2-dehyd 82.5 0.73 2.5E-05 43.4 3.3 30 56-85 3-33 (291)
308 2bcg_G Secretory pathway GDP d 82.3 0.84 2.9E-05 46.3 3.8 48 227-297 250-299 (453)
309 3itj_A Thioredoxin reductase 1 82.2 0.77 2.6E-05 44.0 3.4 54 231-302 221-275 (338)
310 2raf_A Putative dinucleotide-b 82.1 0.81 2.8E-05 41.1 3.2 32 54-85 20-52 (209)
311 3lxd_A FAD-dependent pyridine 81.9 0.77 2.6E-05 45.9 3.3 34 54-87 153-187 (415)
312 3fg2_P Putative rubredoxin red 81.7 0.76 2.6E-05 45.8 3.1 33 54-86 143-176 (404)
313 3rui_A Ubiquitin-like modifier 81.3 1.1 3.6E-05 43.5 3.8 33 53-85 34-68 (340)
314 1lld_A L-lactate dehydrogenase 81.2 0.82 2.8E-05 43.9 3.1 31 55-85 9-42 (319)
315 3fbs_A Oxidoreductase; structu 81.1 1.2 4.2E-05 41.7 4.3 31 54-85 142-173 (297)
316 2ew2_A 2-dehydropantoate 2-red 80.4 0.86 2.9E-05 43.5 3.0 31 55-85 5-36 (316)
317 1zud_1 Adenylyltransferase THI 80.3 1.3 4.3E-05 41.1 3.9 33 53-85 28-62 (251)
318 2a9f_A Putative malic enzyme ( 80.1 0.95 3.2E-05 44.5 3.1 32 54-85 189-222 (398)
319 3l9w_A Glutathione-regulated p 80.1 0.87 3E-05 45.6 2.9 31 55-85 6-37 (413)
320 2y0c_A BCEC, UDP-glucose dehyd 80.0 0.88 3E-05 46.6 3.0 32 54-85 9-41 (478)
321 4dio_A NAD(P) transhydrogenase 79.2 1.1 3.7E-05 44.5 3.2 32 54-85 191-223 (405)
322 1mv8_A GMD, GDP-mannose 6-dehy 79.1 1.3 4.3E-05 44.8 3.8 30 56-85 3-33 (436)
323 3hwr_A 2-dehydropantoate 2-red 79.0 1 3.4E-05 43.4 2.9 29 55-84 21-50 (318)
324 3lk7_A UDP-N-acetylmuramoylala 78.9 1.5 5E-05 44.5 4.2 31 55-85 11-42 (451)
325 3ego_A Probable 2-dehydropanto 78.7 1.2 4.1E-05 42.6 3.3 31 55-85 4-34 (307)
326 3f8d_A Thioredoxin reductase ( 78.6 1.1 3.9E-05 42.4 3.2 34 54-87 155-189 (323)
327 1vl6_A Malate oxidoreductase; 78.6 1.1 3.9E-05 43.9 3.1 33 53-85 192-226 (388)
328 2dpo_A L-gulonate 3-dehydrogen 78.4 1 3.6E-05 43.3 2.8 31 55-85 8-39 (319)
329 1nyt_A Shikimate 5-dehydrogena 78.3 1.1 3.9E-05 41.9 3.0 31 55-85 121-152 (271)
330 3p2y_A Alanine dehydrogenase/p 78.3 1.1 3.7E-05 44.1 2.9 32 54-85 185-217 (381)
331 1txg_A Glycerol-3-phosphate de 78.3 1.1 3.8E-05 43.2 3.0 28 56-83 3-31 (335)
332 3h8v_A Ubiquitin-like modifier 78.1 1.1 3.9E-05 42.3 2.9 34 52-85 35-70 (292)
333 1zcj_A Peroxisomal bifunctiona 77.6 1.2 4.2E-05 45.3 3.2 31 55-85 39-70 (463)
334 1vg0_A RAB proteins geranylger 77.4 2.5 8.4E-05 44.8 5.5 49 227-296 386-435 (650)
335 2aef_A Calcium-gated potassium 77.3 1 3.5E-05 41.0 2.3 30 55-85 11-41 (234)
336 1bg6_A N-(1-D-carboxylethyl)-L 77.0 1.2 4.2E-05 43.3 3.0 31 55-85 6-37 (359)
337 1pzg_A LDH, lactate dehydrogen 76.7 1.5 5.3E-05 42.4 3.5 32 54-85 10-43 (331)
338 1jay_A Coenzyme F420H2:NADP+ o 76.7 1.5 5.2E-05 39.0 3.2 30 56-85 3-34 (212)
339 3k6j_A Protein F01G10.3, confi 76.6 2 6.7E-05 43.6 4.3 31 55-85 56-87 (460)
340 3ond_A Adenosylhomocysteinase; 76.6 1.3 4.4E-05 45.0 3.0 31 55-85 267-298 (488)
341 3gg2_A Sugar dehydrogenase, UD 76.3 1.3 4.5E-05 44.9 3.0 31 55-85 4-35 (450)
342 2v6b_A L-LDH, L-lactate dehydr 76.2 1.4 4.8E-05 42.1 3.0 30 56-85 3-35 (304)
343 1pjc_A Protein (L-alanine dehy 75.9 1.5 5E-05 43.1 3.1 31 55-85 169-200 (361)
344 2eez_A Alanine dehydrogenase; 75.9 1.5 5E-05 43.2 3.1 31 55-85 168-199 (369)
345 1z82_A Glycerol-3-phosphate de 75.7 1.4 4.9E-05 42.6 3.0 32 54-85 15-47 (335)
346 3r9u_A Thioredoxin reductase; 75.6 1.6 5.4E-05 41.3 3.2 33 54-86 148-181 (315)
347 4a9w_A Monooxygenase; baeyer-v 75.2 1.7 5.7E-05 41.9 3.3 31 54-85 164-195 (357)
348 3phh_A Shikimate dehydrogenase 75.1 1.6 5.4E-05 40.8 3.0 31 55-85 120-151 (269)
349 1x13_A NAD(P) transhydrogenase 75.1 1.5 5.1E-05 43.7 3.0 31 55-85 174-205 (401)
350 1evy_A Glycerol-3-phosphate de 75.1 1.4 4.7E-05 43.2 2.7 31 55-85 17-48 (366)
351 3k96_A Glycerol-3-phosphate de 74.9 1.6 5.3E-05 42.8 3.0 32 54-85 30-62 (356)
352 2ewd_A Lactate dehydrogenase,; 74.9 1.9 6.5E-05 41.4 3.6 31 55-85 6-38 (317)
353 1d5t_A Guanine nucleotide diss 74.9 0.96 3.3E-05 45.6 1.5 47 228-297 243-289 (433)
354 1cjc_A Protein (adrenodoxin re 74.8 1.7 5.9E-05 44.1 3.4 54 231-300 269-335 (460)
355 3h5n_A MCCB protein; ubiquitin 74.7 1.7 5.9E-05 42.4 3.2 33 53-85 118-152 (353)
356 2vns_A Metalloreductase steap3 74.7 1.7 5.7E-05 39.1 2.9 31 55-85 30-61 (215)
357 3vh1_A Ubiquitin-like modifier 74.6 2.2 7.4E-05 44.5 4.1 32 54-85 328-361 (598)
358 3qha_A Putative oxidoreductase 74.5 2.3 8E-05 40.3 4.1 32 54-85 16-48 (296)
359 4gsl_A Ubiquitin-like modifier 74.4 1.6 5.6E-05 45.5 3.1 32 54-85 327-360 (615)
360 2x5o_A UDP-N-acetylmuramoylala 74.4 1.3 4.6E-05 44.7 2.4 30 56-85 8-38 (439)
361 2vdc_G Glutamate synthase [NAD 74.3 1.6 5.3E-05 44.4 2.9 31 55-85 266-298 (456)
362 3dtt_A NADP oxidoreductase; st 73.6 1.9 6.5E-05 39.6 3.1 32 54-85 20-52 (245)
363 2hjr_A Malate dehydrogenase; m 73.6 1.8 6E-05 41.9 3.0 31 55-85 16-48 (328)
364 4dll_A 2-hydroxy-3-oxopropiona 73.4 2.6 8.8E-05 40.5 4.1 32 54-85 32-64 (320)
365 2vhw_A Alanine dehydrogenase; 73.3 1.9 6.4E-05 42.6 3.1 31 55-85 170-201 (377)
366 2egg_A AROE, shikimate 5-dehyd 73.2 2 6.7E-05 40.9 3.2 31 55-85 143-175 (297)
367 3pdu_A 3-hydroxyisobutyrate de 73.2 2.3 7.8E-05 40.1 3.6 31 55-85 3-34 (287)
368 2h78_A Hibadh, 3-hydroxyisobut 73.2 2.4 8.1E-05 40.2 3.8 31 55-85 5-36 (302)
369 1dlj_A UDP-glucose dehydrogena 72.9 2 6.7E-05 42.9 3.2 30 56-85 3-32 (402)
370 1p77_A Shikimate 5-dehydrogena 72.9 1.4 4.9E-05 41.3 2.1 31 55-85 121-152 (272)
371 1o94_A Tmadh, trimethylamine d 72.8 2 6.8E-05 46.5 3.5 31 55-85 530-563 (729)
372 1a5z_A L-lactate dehydrogenase 72.7 1.9 6.5E-05 41.4 3.0 30 56-85 3-35 (319)
373 3vtf_A UDP-glucose 6-dehydroge 72.7 2.1 7.3E-05 43.0 3.4 33 53-85 21-54 (444)
374 1nvt_A Shikimate 5'-dehydrogen 72.7 2 6.9E-05 40.5 3.1 29 55-84 130-159 (287)
375 3ojo_A CAP5O; rossmann fold, c 72.6 2.1 7.1E-05 43.0 3.3 31 55-85 13-44 (431)
376 3fbt_A Chorismate mutase and s 72.6 2.7 9.1E-05 39.6 3.9 31 55-85 124-156 (282)
377 3pid_A UDP-glucose 6-dehydroge 72.4 2.1 7E-05 43.0 3.2 31 55-85 38-68 (432)
378 1l7d_A Nicotinamide nucleotide 72.3 2.1 7E-05 42.4 3.2 32 54-85 173-205 (384)
379 2pv7_A T-protein [includes: ch 72.0 2.2 7.5E-05 40.5 3.2 31 55-85 23-55 (298)
380 3mog_A Probable 3-hydroxybutyr 71.9 1.9 6.4E-05 44.2 2.8 31 55-85 7-38 (483)
381 3tnl_A Shikimate dehydrogenase 71.3 2.3 7.8E-05 40.8 3.1 30 55-84 156-187 (315)
382 3o38_A Short chain dehydrogena 71.2 2.3 7.8E-05 39.4 3.1 30 56-85 25-57 (266)
383 1hyh_A L-hicdh, L-2-hydroxyiso 71.1 2.2 7.5E-05 40.8 3.0 30 56-85 4-36 (309)
384 3g0o_A 3-hydroxyisobutyrate de 71.1 2.2 7.4E-05 40.6 3.0 31 55-85 9-40 (303)
385 3doj_A AT3G25530, dehydrogenas 71.0 2.2 7.5E-05 40.8 3.0 31 55-85 23-54 (310)
386 3pef_A 6-phosphogluconate dehy 71.0 2.2 7.6E-05 40.1 3.0 31 55-85 3-34 (287)
387 1x0v_A GPD-C, GPDH-C, glycerol 70.8 2 6.7E-05 41.8 2.6 31 55-85 10-48 (354)
388 4a7p_A UDP-glucose dehydrogena 70.8 2.3 8E-05 42.9 3.2 33 53-85 8-41 (446)
389 1yj8_A Glycerol-3-phosphate de 70.8 2.1 7.1E-05 42.2 2.8 31 55-85 23-61 (375)
390 3dfu_A Uncharacterized protein 70.8 1.7 5.9E-05 39.5 2.0 29 55-83 8-37 (232)
391 3jyo_A Quinate/shikimate dehyd 70.7 2.3 7.9E-05 40.1 3.0 31 55-85 129-161 (283)
392 1tt5_B Ubiquitin-activating en 70.7 2.5 8.6E-05 42.4 3.4 33 53-85 40-74 (434)
393 1vpd_A Tartronate semialdehyde 70.5 3 0.0001 39.4 3.8 31 55-85 7-38 (299)
394 3d4o_A Dipicolinate synthase s 70.2 2.5 8.5E-05 40.0 3.1 31 55-85 157-188 (293)
395 1y8q_A Ubiquitin-like 1 activa 70.1 2.3 7.9E-05 41.4 2.9 33 53-85 36-70 (346)
396 1guz_A Malate dehydrogenase; o 70.1 2.6 8.9E-05 40.3 3.2 30 56-85 3-35 (310)
397 3tl2_A Malate dehydrogenase; c 70.0 2.4 8.2E-05 40.6 3.0 30 55-84 10-41 (315)
398 3don_A Shikimate dehydrogenase 70.0 2.3 7.8E-05 39.9 2.7 31 55-85 119-151 (277)
399 3gpi_A NAD-dependent epimerase 70.0 2.6 8.8E-05 39.4 3.2 30 56-85 6-36 (286)
400 1leh_A Leucine dehydrogenase; 70.0 2.4 8.2E-05 41.5 3.0 30 55-84 175-205 (364)
401 2hk9_A Shikimate dehydrogenase 70.0 2.4 8.3E-05 39.7 3.0 31 55-85 131-162 (275)
402 1t2d_A LDH-P, L-lactate dehydr 69.9 2.4 8.2E-05 40.8 3.0 31 55-85 6-38 (322)
403 1yqg_A Pyrroline-5-carboxylate 69.9 2.5 8.4E-05 39.1 3.0 30 56-85 3-34 (263)
404 1lu9_A Methylene tetrahydromet 69.8 2.5 8.5E-05 39.8 3.0 30 55-84 121-152 (287)
405 3ius_A Uncharacterized conserv 69.8 2.9 9.8E-05 39.0 3.5 30 56-85 8-38 (286)
406 2f1k_A Prephenate dehydrogenas 69.6 2.5 8.5E-05 39.5 3.0 30 56-85 3-33 (279)
407 3nks_A Protoporphyrinogen oxid 69.6 2 6.8E-05 43.6 2.5 53 228-303 243-295 (477)
408 2rir_A Dipicolinate synthase, 69.5 2.6 8.9E-05 40.0 3.1 31 55-85 159-190 (300)
409 2gf2_A Hibadh, 3-hydroxyisobut 69.4 3.4 0.00011 38.9 3.9 30 56-85 3-33 (296)
410 3u62_A Shikimate dehydrogenase 68.8 2.7 9.2E-05 38.9 2.9 31 55-85 110-142 (253)
411 3ew7_A LMO0794 protein; Q8Y8U8 68.7 3.1 0.0001 36.9 3.3 30 56-85 3-34 (221)
412 3eag_A UDP-N-acetylmuramate:L- 68.6 3.7 0.00013 39.5 4.0 31 55-85 6-38 (326)
413 3iwa_A FAD-dependent pyridine 68.3 2.7 9.3E-05 42.7 3.2 32 54-85 160-193 (472)
414 4ezb_A Uncharacterized conserv 68.2 2.9 0.0001 40.0 3.2 31 55-85 26-58 (317)
415 1zej_A HBD-9, 3-hydroxyacyl-CO 67.9 3.1 0.00011 39.4 3.2 31 55-85 14-44 (293)
416 3o8q_A Shikimate 5-dehydrogena 67.8 3.2 0.00011 39.0 3.3 31 55-85 128-160 (281)
417 3h2s_A Putative NADH-flavin re 67.7 3.1 0.0001 37.1 3.0 30 56-85 3-34 (224)
418 1w4x_A Phenylacetone monooxyge 67.6 3.1 0.00011 43.2 3.4 31 55-85 188-219 (542)
419 2uyy_A N-PAC protein; long-cha 67.4 2.7 9.4E-05 40.1 2.8 31 55-85 32-63 (316)
420 3t4e_A Quinate/shikimate dehyd 67.4 3.1 0.00011 39.8 3.1 30 55-84 150-181 (312)
421 3e8x_A Putative NAD-dependent 67.3 3.1 0.00011 37.6 3.0 30 56-85 24-55 (236)
422 3ggo_A Prephenate dehydrogenas 67.2 2.9 9.9E-05 40.0 2.9 31 55-85 35-68 (314)
423 3pwz_A Shikimate dehydrogenase 67.2 3.1 0.0001 39.0 3.0 31 55-85 122-154 (272)
424 2g5c_A Prephenate dehydrogenas 66.9 3 0.0001 39.0 2.9 30 56-85 4-36 (281)
425 2wtb_A MFP2, fatty acid multif 66.9 2.8 9.6E-05 45.2 3.0 31 55-85 314-345 (725)
426 1pjq_A CYSG, siroheme synthase 66.9 3 0.0001 42.3 3.1 30 55-84 14-44 (457)
427 1hdo_A Biliverdin IX beta redu 66.8 3.2 0.00011 36.3 3.0 30 56-85 6-37 (206)
428 3c7a_A Octopine dehydrogenase; 66.7 2.9 9.8E-05 41.6 2.9 28 55-82 4-33 (404)
429 3gvp_A Adenosylhomocysteinase 66.6 3.1 0.0001 41.5 3.0 31 55-85 222-253 (435)
430 1npy_A Hypothetical shikimate 66.6 3.9 0.00013 38.2 3.6 30 55-84 121-152 (271)
431 3qsg_A NAD-binding phosphogluc 66.6 3.1 0.00011 39.7 3.0 30 55-84 26-57 (312)
432 3cky_A 2-hydroxymethyl glutara 66.5 4.1 0.00014 38.4 3.9 31 55-85 6-37 (301)
433 4gx0_A TRKA domain protein; me 66.3 3.2 0.00011 43.4 3.2 33 54-86 349-382 (565)
434 1ur5_A Malate dehydrogenase; o 66.2 3.2 0.00011 39.6 3.0 31 55-85 4-36 (309)
435 3c24_A Putative oxidoreductase 66.0 3.2 0.00011 39.0 2.9 31 55-85 13-45 (286)
436 1y8q_B Anthracycline-, ubiquit 66.0 3.1 0.00011 43.8 3.0 33 53-85 17-51 (640)
437 4huj_A Uncharacterized protein 66.0 1.8 6E-05 39.1 1.0 31 55-85 25-57 (220)
438 3g79_A NDP-N-acetyl-D-galactos 65.8 4.4 0.00015 41.2 4.0 32 55-86 20-54 (478)
439 3abi_A Putative uncharacterize 65.7 3.6 0.00012 40.2 3.4 37 49-85 12-48 (365)
440 3pqe_A L-LDH, L-lactate dehydr 65.5 3.3 0.00011 39.8 3.0 30 55-84 7-39 (326)
441 3ce6_A Adenosylhomocysteinase; 65.5 3.2 0.00011 42.4 3.0 31 55-85 276-307 (494)
442 1ff9_A Saccharopine reductase; 65.3 4.6 0.00016 40.8 4.1 30 56-85 6-36 (450)
443 2pd4_A Enoyl-[acyl-carrier-pro 65.1 5.2 0.00018 37.2 4.2 30 56-85 9-42 (275)
444 1edz_A 5,10-methylenetetrahydr 65.1 5 0.00017 38.4 4.0 31 54-84 178-210 (320)
445 2dvm_A Malic enzyme, 439AA lon 64.6 3.3 0.00011 41.6 2.7 28 55-82 188-219 (439)
446 1lqt_A FPRA; NADP+ derivative, 64.6 3.9 0.00013 41.4 3.5 50 232-300 265-328 (456)
447 4g65_A TRK system potassium up 64.6 3.8 0.00013 41.6 3.3 31 55-85 237-267 (461)
448 2o7s_A DHQ-SDH PR, bifunctiona 64.4 3.1 0.00011 43.0 2.7 30 55-84 366-396 (523)
449 2cvz_A Dehydrogenase, 3-hydrox 64.3 5.2 0.00018 37.4 4.1 30 56-85 4-33 (289)
450 1oju_A MDH, malate dehydrogena 64.2 3.7 0.00013 38.8 3.0 30 56-85 3-35 (294)
451 2d5c_A AROE, shikimate 5-dehyd 64.0 3.6 0.00012 38.1 2.8 31 55-85 118-149 (263)
452 2zyd_A 6-phosphogluconate dehy 64.0 3.7 0.00013 41.9 3.1 32 54-85 16-48 (480)
453 3dqp_A Oxidoreductase YLBE; al 63.8 4.3 0.00015 36.1 3.2 30 56-85 3-34 (219)
454 2dkn_A 3-alpha-hydroxysteroid 63.7 4.3 0.00015 36.9 3.3 30 56-85 4-35 (255)
455 3l6d_A Putative oxidoreductase 63.7 3.6 0.00012 39.1 2.8 32 54-85 10-42 (306)
456 2ywl_A Thioredoxin reductase r 63.5 5.2 0.00018 34.3 3.6 54 228-308 65-118 (180)
457 1i36_A Conserved hypothetical 63.2 3.5 0.00012 38.1 2.6 28 56-83 3-31 (264)
458 3ldh_A Lactate dehydrogenase; 63.1 3.9 0.00013 39.3 2.9 30 55-84 23-55 (330)
459 2rcy_A Pyrroline carboxylate r 63.1 3.9 0.00013 37.7 2.9 31 55-85 6-41 (262)
460 2i6t_A Ubiquitin-conjugating e 63.0 4 0.00014 38.8 3.0 31 55-85 16-49 (303)
461 1pgj_A 6PGDH, 6-PGDH, 6-phosph 62.9 3.7 0.00013 41.9 2.9 31 55-85 3-34 (478)
462 1c1d_A L-phenylalanine dehydro 62.6 4 0.00014 39.7 2.9 30 55-84 177-207 (355)
463 3zwc_A Peroxisomal bifunctiona 62.6 4 0.00014 44.0 3.2 31 55-85 318-349 (742)
464 3ktd_A Prephenate dehydrogenas 62.6 3.9 0.00013 39.7 2.8 31 55-85 10-41 (341)
465 1gpj_A Glutamyl-tRNA reductase 62.5 4 0.00014 40.6 3.0 31 55-85 169-201 (404)
466 3gvi_A Malate dehydrogenase; N 62.3 4.2 0.00014 39.1 3.0 31 55-85 9-41 (324)
467 4ffl_A PYLC; amino acid, biosy 62.2 4.6 0.00016 39.3 3.3 30 56-85 4-34 (363)
468 2h7i_A Enoyl-[acyl-carrier-pro 62.1 5.2 0.00018 37.0 3.6 30 56-85 10-43 (269)
469 4e21_A 6-phosphogluconate dehy 62.1 4.2 0.00014 39.7 3.0 32 54-85 23-55 (358)
470 3tum_A Shikimate dehydrogenase 61.9 4.5 0.00015 37.8 3.0 30 55-84 127-158 (269)
471 3k31_A Enoyl-(acyl-carrier-pro 61.9 5.6 0.00019 37.5 3.8 30 56-85 33-66 (296)
472 3d1l_A Putative NADP oxidoredu 61.8 4.1 0.00014 37.7 2.8 31 55-85 12-44 (266)
473 3r6d_A NAD-dependent epimerase 61.8 4.6 0.00016 36.0 3.0 30 56-85 8-40 (221)
474 3vku_A L-LDH, L-lactate dehydr 61.5 4.4 0.00015 39.0 3.0 30 55-84 11-43 (326)
475 3n58_A Adenosylhomocysteinase; 61.5 4.4 0.00015 40.6 3.0 31 55-85 249-280 (464)
476 2wyu_A Enoyl-[acyl carrier pro 61.5 5.6 0.00019 36.6 3.7 30 56-85 11-44 (261)
477 2pgd_A 6-phosphogluconate dehy 61.5 4.4 0.00015 41.4 3.1 31 55-85 4-35 (482)
478 2yjz_A Metalloreductase steap4 65.6 1.7 5.8E-05 38.7 0.0 31 55-85 21-52 (201)
479 2o3j_A UDP-glucose 6-dehydroge 61.2 5.5 0.00019 40.6 3.8 31 55-85 11-44 (481)
480 1yb4_A Tartronic semialdehyde 61.2 4.4 0.00015 38.0 2.9 28 55-82 5-33 (295)
481 1tt5_A APPBP1, amyloid protein 60.9 4.5 0.00015 41.8 3.1 33 53-85 32-66 (531)
482 1wdk_A Fatty oxidation complex 60.9 3.3 0.00011 44.6 2.1 31 55-85 316-347 (715)
483 4aj2_A L-lactate dehydrogenase 60.8 4.6 0.00016 38.9 3.0 31 54-84 20-53 (331)
484 2weu_A Tryptophan 5-halogenase 60.6 5.9 0.0002 40.6 4.0 48 228-297 182-229 (511)
485 4fs3_A Enoyl-[acyl-carrier-pro 60.5 6.5 0.00022 36.2 3.9 30 56-85 9-42 (256)
486 1qsg_A Enoyl-[acyl-carrier-pro 60.4 5.8 0.0002 36.6 3.6 30 56-85 12-45 (265)
487 2p4q_A 6-phosphogluconate dehy 60.4 4.8 0.00016 41.2 3.2 33 53-85 10-43 (497)
488 2o2s_A Enoyl-acyl carrier redu 60.4 6.3 0.00022 37.5 3.9 28 56-83 12-43 (315)
489 2vvm_A Monoamine oxidase N; FA 60.2 10 0.00035 38.5 5.7 52 228-302 264-316 (495)
490 1pqw_A Polyketide synthase; ro 60.2 4.1 0.00014 35.7 2.3 30 56-85 42-73 (198)
491 3p7m_A Malate dehydrogenase; p 59.8 4.9 0.00017 38.6 3.0 31 55-85 7-39 (321)
492 3h9u_A Adenosylhomocysteinase; 59.6 4.9 0.00017 40.1 3.0 31 55-85 213-244 (436)
493 3nep_X Malate dehydrogenase; h 59.6 5 0.00017 38.4 3.0 30 56-85 3-35 (314)
494 1y6j_A L-lactate dehydrogenase 59.4 4.9 0.00017 38.5 2.9 32 54-85 8-42 (318)
495 3oig_A Enoyl-[acyl-carrier-pro 59.3 6.8 0.00023 36.1 3.8 30 56-85 10-43 (266)
496 2izz_A Pyrroline-5-carboxylate 59.2 4.8 0.00016 38.6 2.8 31 55-85 24-59 (322)
497 3qvo_A NMRA family protein; st 59.1 5.2 0.00018 36.1 2.9 31 55-85 25-58 (236)
498 1np3_A Ketol-acid reductoisome 58.8 5.3 0.00018 38.6 3.0 31 55-85 18-49 (338)
499 1mld_A Malate dehydrogenase; o 58.7 7.5 0.00026 37.1 4.1 30 56-85 3-36 (314)
500 2dbq_A Glyoxylate reductase; D 58.6 5.7 0.0002 38.3 3.3 31 55-85 152-183 (334)
No 1
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=1.6e-75 Score=620.23 Aligned_cols=466 Identities=41% Similarity=0.731 Sum_probs=369.6
Q ss_pred ccccccccccCCcccEEEECCCCchHHHHhhhhccCeeEEEecCCCCCCCCCccccchhccccCCCCCCccccccCcCCC
Q 009873 41 YMTSDVKEVAGKSFDYIVVGGGTTGCPLAATLSDNFSVLLVERGGSPFGNPLVTDKRFFGFSLLQTDEYTSVAQSFISTD 120 (523)
Q Consensus 41 ~~~~~~~~~~~~~~DvIIVGsG~aG~~~A~~Laeg~~VlvlE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (523)
++..........+|||||||||.+|+++|.+|+||.+|||||+|+....++....+..+...+.....|.+.+|.....+
T Consensus 14 ~~~~~~~~~~~~~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~t~~q~~~~~~ 93 (536)
T 1ju2_A 14 FAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKTPVERFVSED 93 (536)
T ss_dssp GEEEGGGSCSEEEEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCGGGSGGGGBGGGHHHHHHSCCCSSSSEEEEECTT
T ss_pred cccCcccccccCcccEEEECccHHHHHHHHHHhcCCcEEEEecCCCcCCCcceecchhHhhhccCCCcCcCCCccccCCC
Confidence 34444344456789999999999999999999999999999999865434444444444332222223566677666677
Q ss_pred ceeecCceecccccccCCccccCCChhhHhhCC--CCHHHHHHHhHhhhccccCCCCCChhHHHHHHHHHHcCCCCCCCC
Q 009873 121 GVQNHRGRVLGGSSAINGGFYSRAREDFVKKAG--WDEELVKKAYEWVESKVVFPPELTPWQSVVEFGLLEAGILPYNGY 198 (523)
Q Consensus 121 ~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~~~--w~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~ 198 (523)
.+.+.+|+++||+|.+|+|++.|+.+.+++..+ |+++++.+||+++|+.+.+.|...++...+.+++.+.|+.+.++.
T Consensus 94 ~~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~G~~W~~~~~~p~~~~~e~~~~~~~~~~~~~~~~~~a~~~~G~~~~~~~ 173 (536)
T 1ju2_A 94 GIDNVRGRVLGGTSIINAGVYARANTSIYSASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEAGVHPNHGF 173 (536)
T ss_dssp SCEEEEECBTTGGGGTSCCEECBCCTTSSTTSSSCCCHHHHHHHHHHHHHHHCBCCCCCHHHHHHHHHHHHTTCCCEEEE
T ss_pred cceeecceeccccccccCeEEEeCCHHHHhhccCCCChHHHHHHHHhhhcccCCCCCCCcHHHHHHHHHHHcCCCCCCCc
Confidence 788899999999999999999999887777667 999999999999999887777777888889999999998665543
Q ss_pred CcCCCCcceeeeeEEcCCCeeechHhhhhhCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEE-
Q 009873 199 SLEHIEGTKIGGTAFDQCGKRHTSADLLEAGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAY- 277 (523)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~- 277 (523)
..+...++..+.+.++.+|.|+++..+++.+++.|++|+++++|++|+++++++ .+++||++.+.+|+ .+++.
T Consensus 174 ~~~~~~g~~~g~~~~~~~g~r~s~~~~~~~~~~~~~~v~~~~~v~~i~~~~~~~---~~~~GV~~~~~~g~---~~~~~v 247 (536)
T 1ju2_A 174 SLDHEEGTRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIFSNAPG---LTATGVIYRDSNGT---PHQAFV 247 (536)
T ss_dssp CCBCCSEEEECEESBCTTSBBCCGGGGGGGSCTTTEEEEESCEEEEEEECCSSS---CBEEEEEEECTTSC---EEEEEE
T ss_pred ccCCCCCceeeeEEECCCCeEecHHHhhhhhcCCCcEEEeCCEEEEEEECCCCC---CEEEEEEEEeCCCc---eEEEEe
Confidence 333344444444445578889887776667788999999999999999987421 18999999875676 65663
Q ss_pred -ecCCCCCCCCCcEEEecCCchhHHHHHhhCCCChhhhhhCCCCceecCcccccccccCcCceEEEecCCCCCCCCCcce
Q 009873 278 -LNKPGNSSTWGDVILSAGALGSPQLLLLSGIGPHDHLKDLNIPTIVDLQEVGEGMQDNPCIAKLVDTMPQKRLPEPPEV 356 (523)
Q Consensus 278 -a~~~~~~~~~~~VILaaGa~~tp~lLl~SGig~~~~l~~~gi~~~~~~p~vG~~l~dh~~~~~~~~~~~~~~~~~~~~~ 356 (523)
+ ++.||||||+++||+||++||||+.++|+++||+++.++|+||+||+||+...+.+... .+......+.
T Consensus 248 ~a--------~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~~~~~~~-~~~~~~~~~~ 318 (536)
T 1ju2_A 248 RS--------KGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPP-NPIEPTIVTV 318 (536)
T ss_dssp EE--------EEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEEEEECCS-SCCCCCCCCE
T ss_pred cc--------CCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcceeEEEEeC-CCcccccchh
Confidence 3 59999999999999999999999999999999999999999999999999877665332 2221111111
Q ss_pred eee---ee-----------------cCCC-C---CCcccEEeeecCcCcceEEEe-cCCCCCCCCeeecCCCCChhhHHH
Q 009873 357 VAG---VL-----------------PISS-N---ASRMPIAAKLAFPISKGKLEL-DSTDPRQNPSIKFNYLAKEKDLHE 411 (523)
Q Consensus 357 ~g~---~~-----------------~~~~-~---~~~~~~~~~~~~p~s~g~v~l-~~~d~~~~p~i~~~~~~~~~D~~~ 411 (523)
.+. |+ +... . .....+...++.|.|||+|+| .++||.+.|.|+++|+.++.|++.
T Consensus 319 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~ 398 (536)
T 1ju2_A 319 LGISNDFYQCSFSSLPFTTPPFGFFPSSSYPLPNSTFAHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSH 398 (536)
T ss_dssp EEECSSEEEEEEEECCCSSCCBTTBSSSCCCCCSSCEEEEEEEESSCSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHH
T ss_pred hhHHHHHHHcCCCCCCCChhhheeecCcccCCCCcceEEEeeecCCCCcceEEEeCCCCCcccCceecccccCCccHHHH
Confidence 111 11 0000 0 001123455678999999999 788999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccccccCCCC------------CCCCCCCHHHHHHHHHcccccccccccceecccccCCCCcEec
Q 009873 412 CVKMVQLLDKVTKSQSVSSFLGIKP------------QEKLMSNSDELRKLCKNNVRTFYHYHGGCIVGSVVDKDYRVYG 479 (523)
Q Consensus 412 ~~~~~~~~~~i~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG~VvD~~~rv~g 479 (523)
+.++++.+++++++.++..+...+. .|....+++++++|++....+.+|++|||+||+|||+++||||
T Consensus 399 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrMG~VVD~~lrV~G 478 (536)
T 1ju2_A 399 CVSGMKKIGELLSTDALKPYKVEDLPGVEGFNILGIPLPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTG 478 (536)
T ss_dssp HHHHHHHHHHHHTSGGGGGGCSSCCSTTCSCCBSSSCCCSCTTCHHHHHHHHHHHCEECSCCEESSCBTTTBCTTSBBTT
T ss_pred HHHHHHHHHHHHcCccchhhhccccccCCCccccccCCCcccCCHHHHHHHHHhccCccccCcCccCCccEECCCCeEcC
Confidence 9999999999999998887764432 1222457899999999999999999999999999999999999
Q ss_pred cCCcEEeeccccCCCCCCCcHHHHHHHHHHHHHHHHHHHhhh
Q 009873 480 VKGLRVIDGSTFQESPGTNPMATVMMLGRYQGVKLVEERREI 521 (523)
Q Consensus 480 ~~nL~V~D~Sv~P~~~~~nPtlTi~Ala~r~a~~i~~~~~~~ 521 (523)
++||||+|+||||+++++||++|+||||+|+|+.|++++++.
T Consensus 479 v~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~~~~~ 520 (536)
T 1ju2_A 479 INALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQERSAS 520 (536)
T ss_dssp CBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999988764
No 2
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=5e-75 Score=615.70 Aligned_cols=448 Identities=26% Similarity=0.359 Sum_probs=354.8
Q ss_pred cccEEEECCCCchHHHHhhhhc--cCeeEEEecCCCCCCCCCccccchhccccC---CCCCCccccccCcCCCceeecCc
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD--NFSVLLVERGGSPFGNPLVTDKRFFGFSLL---QTDEYTSVAQSFISTDGVQNHRG 127 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae--g~~VlvlE~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g 127 (523)
+|||||||||.+||++|.||+| +.+|||||+|+....++....+..+..... ..+.|.+.+|....++.+.+.+|
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~~~~r~~~~~rG 81 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAGYNGRSIAYPRG 81 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGGGTTCCCBCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCCCCCceEeccCC
Confidence 6999999999999999999998 699999999986644444444444433322 23467888898888899999999
Q ss_pred eecccccccCCccccCCChhhHh-------hCCCCHHHHHHHhHhhhccccC-------------------------CCC
Q 009873 128 RVLGGSSAINGGFYSRAREDFVK-------KAGWDEELVKKAYEWVESKVVF-------------------------PPE 175 (523)
Q Consensus 128 ~~lGG~s~~~~~~~~r~~~~~~~-------~~~w~~~~~~~~~~~~~~~~~~-------------------------~p~ 175 (523)
++|||+|++|+|++.|+.+.+++ ..+|.++++.+||++.|+.... .+.
T Consensus 82 k~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~ 161 (566)
T 3fim_B 82 RMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGF 161 (566)
T ss_dssp CBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEBSCSS
T ss_pred cEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeeecCCC
Confidence 99999999999999999876654 2579999999999999876421 112
Q ss_pred CChhHHHHHHHHHHc--CCCCCCCCCcCCCCcceeeeeEEcCCCeeechHhh-hh-hCCCCCeEEEeccEEEEEEEc---
Q 009873 176 LTPWQSVVEFGLLEA--GILPYNGYSLEHIEGTKIGGTAFDQCGKRHTSADL-LE-AGNPKNLVVLLNATVNNIIFS--- 248 (523)
Q Consensus 176 ~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-l~-~~~~~g~~i~~~~~V~~l~~~--- 248 (523)
..+....+.+++.++ |++...+.......|.......++ +|.|+++... |. +..++|++|++++.|+||+++
T Consensus 162 ~~~~~~~~~~a~~~~~~G~~~~~d~n~~~~~G~~~~~~~~~-~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~ 240 (566)
T 3fim_B 162 PTPLDDRVLATTQEQSEEFFFNPDMGTGHPLGISWSIASVG-NGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTT 240 (566)
T ss_dssp CCTHHHHHHHHHHHTHHHHCBCSCGGGSCCCEEEECCBSEE-TTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECCEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCccCCCCCCCcceEEeeeeecC-CCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEeecCC
Confidence 356678888899988 874322211111222222112222 6888887654 54 667899999999999999998
Q ss_pred CCCCCCCceeeEEEEEecCC-CCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhCCCChhhhhhCCCCceecCcc
Q 009873 249 NNGKANESRAHGIRFIKSDG-SSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSGIGPHDHLKDLNIPTIVDLQE 327 (523)
Q Consensus 249 ~~g~~~~~~v~GV~~~~~~g-~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SGig~~~~l~~~gi~~~~~~p~ 327 (523)
++.+ +++||++.+.+| + .++++| +|+||||||+|+||+|||+||||++++|+++||+++.++|+
T Consensus 241 ~g~~----rA~GVe~~~~~g~~---~~~v~A--------~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPg 305 (566)
T 3fim_B 241 NGLP----AFRCVEYAEQEGAP---TTTVCA--------KKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPS 305 (566)
T ss_dssp TTEE----ECCEEEEESSTTSC---CEEEEE--------EEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTT
T ss_pred CCCC----EEEEEEEEECCCce---EEEEEe--------eeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcc
Confidence 2212 999999987556 6 778887 79999999999999999999999999999999999999999
Q ss_pred cccccccCcCceEEEecCCCCCCC--------------------------CCcceeeeeecCCC----------------
Q 009873 328 VGEGMQDNPCIAKLVDTMPQKRLP--------------------------EPPEVVAGVLPISS---------------- 365 (523)
Q Consensus 328 vG~~l~dh~~~~~~~~~~~~~~~~--------------------------~~~~~~g~~~~~~~---------------- 365 (523)
||+||+||+.+.+.|......... ...+. ..|+....
T Consensus 306 VG~NLqDH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~-~~f~~~~~~~~~~~~~~~~~~~~~ 384 (566)
T 3fim_B 306 VGRNLSDHLLLPAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALIANH-LAWLRLPSNSSIFQTFPDPAAGPN 384 (566)
T ss_dssp TTCSBBCCEEECCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCSCSE-EEEECCCTTCGGGGTSCCCSSSTT
T ss_pred hhhhhhcCccceEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccChhhh-eeeeccccchhhhhhhccccccCC
Confidence 999999999877665433211000 00000 11221110
Q ss_pred ---------------------CCCcccEEeeecCcCcceEEEecCCCCCCCCeeecCCCCChhhHHHHHHHHHHHHHHhc
Q 009873 366 ---------------------NASRMPIAAKLAFPISKGKLELDSTDPRQNPSIKFNYLAKEKDLHECVKMVQLLDKVTK 424 (523)
Q Consensus 366 ---------------------~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~ 424 (523)
....+++...+++|.|||+|+|.++||++.|.|+++|+.++.|++.+.++++.++++++
T Consensus 385 ~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~ 464 (566)
T 3fim_B 385 SAHWETIFSNQWFHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLS 464 (566)
T ss_dssp SCSEEEEEESSCCCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEecccchhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHh
Confidence 01123455677899999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCC--CCCCCHHHHHHHHHcccccccccccceecc------cccCCCCcEeccCCcEEeeccccCCCCC
Q 009873 425 SQSVSSFLGIKPQE--KLMSNSDELRKLCKNNVRTFYHYHGGCIVG------SVVDKDYRVYGVKGLRVIDGSTFQESPG 496 (523)
Q Consensus 425 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG------~VvD~~~rv~g~~nL~V~D~Sv~P~~~~ 496 (523)
..+++.+...+..| ....++++|++|+++...+.+|++|||+|| +|||+++||||++||||+|+||||++++
T Consensus 465 ~~~~~~~~~~~~~P~~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~ 544 (566)
T 3fim_B 465 GQAWADFVIRPFDPRLRDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVDGSILPFAPN 544 (566)
T ss_dssp SGGGTTTEEEESSGGGSCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEECSGGGCCSCCS
T ss_pred CcccCCccccccCCCcccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEEcccccCCCCCC
Confidence 98888776555555 356789999999999999999999999998 7999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHH
Q 009873 497 TNPMATVMMLGRYQGVKLVEE 517 (523)
Q Consensus 497 ~nPtlTi~Ala~r~a~~i~~~ 517 (523)
+||++|+||+|+|+||.|+++
T Consensus 545 ~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 545 AHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp SCTHHHHHHHHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999875
No 3
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=4.5e-75 Score=616.67 Aligned_cols=458 Identities=26% Similarity=0.370 Sum_probs=352.4
Q ss_pred ccccCCcccEEEECCCCchHHHHhhhhc--cCeeEEEecCCC-CCCCCCccccchhccccCC--CCCCccccccCcCCCc
Q 009873 47 KEVAGKSFDYIVVGGGTTGCPLAATLSD--NFSVLLVERGGS-PFGNPLVTDKRFFGFSLLQ--TDEYTSVAQSFISTDG 121 (523)
Q Consensus 47 ~~~~~~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvlE~G~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 121 (523)
....+.+|||||||||.+||++|.||+| +.+|||||+|+. ...++.+..+..+...+.. .+.|.+.+|. ..++.
T Consensus 13 ~~~~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-~~~r~ 91 (583)
T 3qvp_A 13 KDVSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-TNNQT 91 (583)
T ss_dssp GGTTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-TTSCC
T ss_pred hhcCCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-CCCCe
Confidence 4455678999999999999999999998 589999999983 3334444445444433322 2356666664 46677
Q ss_pred eeecCceecccccccCCccccCCChhhHhh------C-CCCHHHHHHHhHhhhcccc-----------------------
Q 009873 122 VQNHRGRVLGGSSAINGGFYSRAREDFVKK------A-GWDEELVKKAYEWVESKVV----------------------- 171 (523)
Q Consensus 122 ~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~------~-~w~~~~~~~~~~~~~~~~~----------------------- 171 (523)
+.+.+|++|||+|++|+|++.|+.+.+++. . +|.|+++.+||++.|+...
T Consensus 92 ~~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl 171 (583)
T 3qvp_A 92 ALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTV 171 (583)
T ss_dssp CEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSE
T ss_pred eeccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCE
Confidence 899999999999999999999998876653 3 8999999999999987631
Q ss_pred ---CC---CCCChhHHHHHHHHHHcCCCCCCCCCcCCCCcceeeeeEEcCCCeeechHh-hhh-hCCCCCeEEEeccEEE
Q 009873 172 ---FP---PELTPWQSVVEFGLLEAGILPYNGYSLEHIEGTKIGGTAFDQCGKRHTSAD-LLE-AGNPKNLVVLLNATVN 243 (523)
Q Consensus 172 ---~~---p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~l~-~~~~~g~~i~~~~~V~ 243 (523)
.. ....++.+.+.++++++|++...++......|........++.|.|+++.. +|. ..+++|++|++++.|+
T Consensus 172 ~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~ 251 (583)
T 3qvp_A 172 HAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVG 251 (583)
T ss_dssp EEBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEE
T ss_pred EecCCCCcccCCHHHHHHHHHHHHcCCCcCCCCCCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEE
Confidence 00 123567788889999999853322222222233222233345688887765 454 6678999999999999
Q ss_pred EEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhCCCChhhhhhCCCCcee
Q 009873 244 NIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSGIGPHDHLKDLNIPTIV 323 (523)
Q Consensus 244 ~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SGig~~~~l~~~gi~~~~ 323 (523)
||++++.+. +.+|+||++.+.+|+ .++++| +|+||||||+|+||+|||+||||++++|+++||+++.
T Consensus 252 rIl~d~~~~--~~ra~GV~~~~~~G~---~~~v~A--------~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~ 318 (583)
T 3qvp_A 252 KVLLSQNGT--TPRAVGVEFGTHKGN---THNVYA--------KHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVV 318 (583)
T ss_dssp EEEEECSSS--SCEEEEEEEESSTTC---EEEEEE--------EEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSB
T ss_pred EEEeccCCC--CCEEEEEEEEecCCc---EEEEEE--------CCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCcee
Confidence 999984200 019999999865788 788887 6799999999999999999999999999999999999
Q ss_pred cCcccccccccCcCceEEEecCCCCCCC-------CCcce-------------------------eeeeec---------
Q 009873 324 DLQEVGEGMQDNPCIAKLVDTMPQKRLP-------EPPEV-------------------------VAGVLP--------- 362 (523)
Q Consensus 324 ~~p~vG~~l~dh~~~~~~~~~~~~~~~~-------~~~~~-------------------------~g~~~~--------- 362 (523)
++| ||+||+||+...+.|......... ..... .+.|..
T Consensus 319 dLP-VG~NLqDH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (583)
T 3qvp_A 319 DLP-VGLNLQDQTTATVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQWAEEAVARGGFHNTTALLIQYE 397 (583)
T ss_dssp CCC-TTCCBBCCEEEEEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHHHHHHHHHTTSCSCHHHHHHHHH
T ss_pred eCc-cccchhhCccceEEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcchhhcccccccCccccHHHHhhhc
Confidence 999 999999999887776443210000 00000 000000
Q ss_pred --------CCC--------CCCcccEEeeecCcCcceEEEecCCCCCCCCee-ecCCCCChhhHHHHHHHHHHHHHHhcc
Q 009873 363 --------ISS--------NASRMPIAAKLAFPISKGKLELDSTDPRQNPSI-KFNYLAKEKDLHECVKMVQLLDKVTKS 425 (523)
Q Consensus 363 --------~~~--------~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i-~~~~~~~~~D~~~~~~~~~~~~~i~~~ 425 (523)
... ......+....+.|.|||+|+|+++||++.|.| +++|+.++.|++.+.++++.+++++++
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~~~i~~~ 477 (583)
T 3qvp_A 398 NYRDWIVNHNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNISNS 477 (583)
T ss_dssp HHHHHHHHSCCEEEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHHHHHHHHHTS
T ss_pred cchhhhccCCCCcceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 000 000112334457999999999999999999999 999999999999999999999999998
Q ss_pred cccccccCCCCCCC----CCCCHHHHHHHHHcccccccccccceecc-----cccCCCCcEeccCCcEEeeccccCCCCC
Q 009873 426 QSVSSFLGIKPQEK----LMSNSDELRKLCKNNVRTFYHYHGGCIVG-----SVVDKDYRVYGVKGLRVIDGSTFQESPG 496 (523)
Q Consensus 426 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG-----~VvD~~~rv~g~~nL~V~D~Sv~P~~~~ 496 (523)
.+++.+...+..|. ...++++|++|++....+.+|++|||+|| +|||+++||||++||||+|+||||+.++
T Consensus 478 ~~~~~~~~~~~~pg~~~~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~ 557 (583)
T 3qvp_A 478 GAMQTYFAGETIPGDNLAYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEMGGVVDNAARVYGVQGLRVIDGSIPPTQMS 557 (583)
T ss_dssp TTHHHHEEEEEESGGGSCTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEEECSTTCCSSCCS
T ss_pred cchhhccccccCCCcccccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCCCceECCCCeEecCCCeEEeecccCCCCCC
Confidence 88876654333332 23689999999999999999999999999 8999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHh
Q 009873 497 TNPMATVMMLGRYQGVKLVEERR 519 (523)
Q Consensus 497 ~nPtlTi~Ala~r~a~~i~~~~~ 519 (523)
+||++|+||+|+|+||.|++++.
T Consensus 558 ~n~~~t~~aiaeraAd~I~~~~~ 580 (583)
T 3qvp_A 558 SHVMTVFYAMALKISDAILEDYA 580 (583)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999988753
No 4
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=7.5e-72 Score=592.72 Aligned_cols=445 Identities=23% Similarity=0.339 Sum_probs=338.7
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-c-CeeEEEecCCCC-CCCCCccccchhccccCCC--CCCccccccCcCCCcee--
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGGSP-FGNPLVTDKRFFGFSLLQT--DEYTSVAQSFISTDGVQ-- 123 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-- 123 (523)
..+|||||||||.+||++|.||+| + .+|||||+|+.. ...+.+..+..+....... +.|.+. ..++...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~----~~~r~~~~~ 79 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT----MVRRDDYER 79 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE----EEEETTEEE
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE----ECCcccccc
Confidence 467999999999999999999999 5 799999999852 2223333333333222211 122222 2222333
Q ss_pred ----ecCceecccccccCCccccCCChhhHhh------CCCCHHHHHHHhHhhhccccCC--------------------
Q 009873 124 ----NHRGRVLGGSSAINGGFYSRAREDFVKK------AGWDEELVKKAYEWVESKVVFP-------------------- 173 (523)
Q Consensus 124 ----~~~g~~lGG~s~~~~~~~~r~~~~~~~~------~~w~~~~~~~~~~~~~~~~~~~-------------------- 173 (523)
+.+|++|||+|++|+|++.|+.+.+++. .+|.++++.+||++.|+.....
T Consensus 80 ~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~v~~ 159 (577)
T 3q9t_A 80 IEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISH 159 (577)
T ss_dssp EEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEEEEE
T ss_pred ccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEEeeC
Confidence 8899999999999999999998876654 4799999999999988754321
Q ss_pred CC----CChhHHHHHHHHHHcCCCCCCCCCcCCCCcceeeeeEEcCCCeeechHhhhhhCCCCCeEEEeccEEEEEEEcC
Q 009873 174 PE----LTPWQSVVEFGLLEAGILPYNGYSLEHIEGTKIGGTAFDQCGKRHTSADLLEAGNPKNLVVLLNATVNNIIFSN 249 (523)
Q Consensus 174 p~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~g~~i~~~~~V~~l~~~~ 249 (523)
+. ..++...+.+++.+.|++...+.......|....... ...|.|+++..+ ...++|++|++++.|++|++++
T Consensus 160 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~-~~~g~R~s~~~~--l~~r~Nl~v~~~a~v~ri~~~~ 236 (577)
T 3q9t_A 160 AELIDEMAPFRENLTKAWKSMGQPLIENIYDGEMDGLTHCCDT-IYRGQRSGSFLF--VKNKPNITIVPEVHSKRLIINE 236 (577)
T ss_dssp CCCCGGGHHHHHHHHHHHHHTTCCBCSCCSSSCCCEEEECEES-EETTEECCGGGG--SSSCTTEEEECSEEEEEEEEET
T ss_pred CCCCcccchHHHHHHHHHHHcCCCcCCCCCCCCcCeEEeecce-ecCCeEeeHHHH--HhcCCCeEEEcCcEEEEEEEeC
Confidence 01 1235667788889999853222211122222211111 135777765433 3568899999999999999985
Q ss_pred CCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhCCCChhhhhhCCCCceecCcccc
Q 009873 250 NGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSGIGPHDHLKDLNIPTIVDLQEVG 329 (523)
Q Consensus 250 ~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SGig~~~~l~~~gi~~~~~~p~vG 329 (523)
.++ +++||++.+.+|+ .+++++ +|+||||||+|+||+|||+|||||+++|+++||+++.++|+||
T Consensus 237 ~~~----~a~GV~~~~~~g~---~~~v~A--------~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG 301 (577)
T 3q9t_A 237 ADR----TCKGVTVVTAAGN---ELNFFA--------DREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVG 301 (577)
T ss_dssp TTT----EEEEEEEEETTSC---EEEEEE--------EEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTT
T ss_pred CCC----EEEEEEEEeCCCc---EEEEEe--------eeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhh
Confidence 322 9999999986687 788887 7899999999999999999999999999999999999999999
Q ss_pred cccccCcCceEEEecCCCCCC---------------------------CCCcceeeeee---------------------
Q 009873 330 EGMQDNPCIAKLVDTMPQKRL---------------------------PEPPEVVAGVL--------------------- 361 (523)
Q Consensus 330 ~~l~dh~~~~~~~~~~~~~~~---------------------------~~~~~~~g~~~--------------------- 361 (523)
+||+||+.+.+.|........ ....+..+ |.
T Consensus 302 ~nl~DH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 380 (577)
T 3q9t_A 302 QNLMDHPGVPFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGSGLLELVG-FPRIDKYLEKDAEYRKAKAANGG 380 (577)
T ss_dssp EEEBCCEEEEEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGCCSEEEEE-ECCCHHHHTTCHHHHHHHHHTTT
T ss_pred hhhhcCcceeEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCcccchhheeE-EeecChhhhcchhhhhhhhcccc
Confidence 999999988777644321100 00000001 11
Q ss_pred -----------------cCC-----------CCCCcccEEeeecCcCcce-EEEecCCCCCCCCeeecCCCCChhhHHHH
Q 009873 362 -----------------PIS-----------SNASRMPIAAKLAFPISKG-KLELDSTDPRQNPSIKFNYLAKEKDLHEC 412 (523)
Q Consensus 362 -----------------~~~-----------~~~~~~~~~~~~~~p~s~g-~v~l~~~d~~~~p~i~~~~~~~~~D~~~~ 412 (523)
+.. .....+++...+++|.||| +|+|.++||.+.|.|+++|+.+|.|++.+
T Consensus 381 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~ 460 (577)
T 3q9t_A 381 KDPFSPLGQPHFELDFVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAM 460 (577)
T ss_dssp SCSSCTTSCCSEEEEEESSCCGGGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHH
T ss_pred ccccCCCCCceEEEEecccccccccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHH
Confidence 000 0001234556778999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHh-cccccccccCCCCCCC-CCCCHHHHHHHHHcccccccccccceecc-----cccCCCCcEeccCCcEE
Q 009873 413 VKMVQLLDKVT-KSQSVSSFLGIKPQEK-LMSNSDELRKLCKNNVRTFYHYHGGCIVG-----SVVDKDYRVYGVKGLRV 485 (523)
Q Consensus 413 ~~~~~~~~~i~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG-----~VvD~~~rv~g~~nL~V 485 (523)
.++++.+++++ +..++..+...+..|+ ...++++|++|+++...+.+|++|||+|| +|||+++||||++||||
T Consensus 461 ~~~~~~~~~i~~~~~~~~~~~~~e~~p~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~VVD~~lrV~Gv~~LrV 540 (577)
T 3q9t_A 461 REGIRFSYDLLFKGEGFKDLVESEYPWEMPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNIDQGVVDPKLKVHGIKKLRV 540 (577)
T ss_dssp HHHHHHHHHHHHHSTTGGGTEEEEESSCCCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTTTCSBCTTCBBTTCBSEEE
T ss_pred HHHHHHHHHHHHhChhhhhccccccCCCCCcCCHHHHHHHHHhccccccccccceecCCCCCCceECCCCeEeCCCCcEE
Confidence 99999999999 8888887765554443 45789999999999999999999999999 69999999999999999
Q ss_pred eeccccCCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 009873 486 IDGSTFQESPGTNPMATVMMLGRYQGVKLVEER 518 (523)
Q Consensus 486 ~D~Sv~P~~~~~nPtlTi~Ala~r~a~~i~~~~ 518 (523)
+|+||||+.+++||++|+||+|+|+||.|++++
T Consensus 541 vDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~ 573 (577)
T 3q9t_A 541 ADASVIPIIPDCRIQNSVYAVGEKCADMIKAEH 573 (577)
T ss_dssp CSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred eecccccCCCCCccHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999998764
No 5
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=4.9e-70 Score=580.80 Aligned_cols=445 Identities=23% Similarity=0.337 Sum_probs=346.3
Q ss_pred CCcccEEEECCCCchHHHHhhhhc--cCeeEEEecCCCCCCCCCccccchhccccCC--CCCCccccccCcCCCceeecC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD--NFSVLLVERGGSPFGNPLVTDKRFFGFSLLQ--TDEYTSVAQSFISTDGVQNHR 126 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvlE~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 126 (523)
..+|||||||||++|+++|.||+| ++||||||+|+... ++....+..+...... ...|.+.+|....++.+.+.+
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~-~~~~~~p~~~~~~~~~~~dw~~~t~p~~~~~~~~~~~~r 93 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPT-DPDIWNPAAWPALQGRSYDWDYRTEAQAGTAGRAHHWAR 93 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCC-CGGGGSGGGGGGTTTSTTBCCEECCCBGGGTTBCCEECC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCC-CcchhChhhHhhccCCccccCccccccCCCCCCeEeccC
Confidence 348999999999999999999998 58999999997532 2333333333322211 235677788888888899999
Q ss_pred ceecccccccCCccccCCChhhHhh-------CCCCHHHHHHHhHhhhccccCC----------------CCCChhHHHH
Q 009873 127 GRVLGGSSAINGGFYSRAREDFVKK-------AGWDEELVKKAYEWVESKVVFP----------------PELTPWQSVV 183 (523)
Q Consensus 127 g~~lGG~s~~~~~~~~r~~~~~~~~-------~~w~~~~~~~~~~~~~~~~~~~----------------p~~~~~~~~~ 183 (523)
|++|||+|++|++++.|+.+.+++. ++|+++++.+||++.|+..... ....++.+.+
T Consensus 94 G~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~ 173 (526)
T 3t37_A 94 GRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGGDGIHGKGGPLPIHLPADEVSPLARAF 173 (526)
T ss_dssp BCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTTSSSSCSSCSEECBCCSTTSCHHHHHH
T ss_pred ccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCCccccCcCCCcCcccccccCCHHHHHH
Confidence 9999999999999999998766642 4699999999999998764321 1345677888
Q ss_pred HHHHHHcCCCCCCCCCcCCCCcceeeeeEEcCCCeeechHhh-h-h-hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeE
Q 009873 184 EFGLLEAGILPYNGYSLEHIEGTKIGGTAFDQCGKRHTSADL-L-E-AGNPKNLVVLLNATVNNIIFSNNGKANESRAHG 260 (523)
Q Consensus 184 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-l-~-~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~G 260 (523)
.++..+.|+............++... ...+..|.+.+.... + + ...++|++|++++.|++|+++++ +++|
T Consensus 174 ~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~------~a~g 246 (526)
T 3t37_A 174 IEAGASLGLPRLEGHNSGEMIGVTPN-SLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEGN------QVRS 246 (526)
T ss_dssp HHHHHHTTCCBCSSSCSSCCBSBCCC-CBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEETT------EEEE
T ss_pred HHHHHHcCCCcccCCCCCcccccccc-cccccCCcccccccccccccccCCCCeEEEeCCEEEEEEecCC------eEEE
Confidence 89999999854332222111121111 112235666665543 3 3 45689999999999999999987 9999
Q ss_pred EEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhCCCChhhhhhCCCCceecCcccccccccCcCceE
Q 009873 261 IRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSGIGPHDHLKDLNIPTIVDLQEVGEGMQDNPCIAK 340 (523)
Q Consensus 261 V~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SGig~~~~l~~~gi~~~~~~p~vG~~l~dh~~~~~ 340 (523)
|++.+. ++ ..++.+ +.||||||+|+||+|||+||||+.++|.++||+++.++|.||+||+||+....
T Consensus 247 v~~~~~-~~---~~~~~a---------~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~ 313 (526)
T 3t37_A 247 LEVVGR-QG---SAEVFA---------DQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAG 313 (526)
T ss_dssp EEEEET-TE---EEEEEE---------EEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEE
T ss_pred EEEEec-Cc---eEEEee---------cceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccce
Confidence 999884 44 566776 99999999999999999999999999999999999999999999999987554
Q ss_pred EEecCCCCCCCCCc---cee------------------eeee-cC-------CCCCCcccEEeeecCcCcceEEEecCCC
Q 009873 341 LVDTMPQKRLPEPP---EVV------------------AGVL-PI-------SSNASRMPIAAKLAFPISKGKLELDSTD 391 (523)
Q Consensus 341 ~~~~~~~~~~~~~~---~~~------------------g~~~-~~-------~~~~~~~~~~~~~~~p~s~g~v~l~~~d 391 (523)
.+.....+...... ... +... +. ......+.+...+.+|.|+|+|++++.|
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~srG~v~~~s~d 393 (526)
T 3t37_A 314 NLYAARKPVPPSRLQHSESMAYMRADSFTAAGQPEIVVGCGVAPIVSESFPAPAAGSAYSLLFGITHPTSRGSVRISGPE 393 (526)
T ss_dssp EEEEESSCCCCCSSCSEEEEEEECSSCSSCCSSCCEEEEEESSCCCCTTSCCCCTTSEEEEEEEESSCCCCBEEECSSSS
T ss_pred eEEeccCCcchHhhcchhhhhhhhcccccccCCcceeeecccccccccccccccCCcceeeeccccCccccCcceeccCC
Confidence 43222222211100 000 0000 00 0011123456778899999999999999
Q ss_pred CCCCCeeecCCCCChhhHHHHHHHHHHHHHHhcccccccccCCCCCCCCCCCHHHHHHHHHcccccccccccceecc---
Q 009873 392 PRQNPSIKFNYLAKEKDLHECVKMVQLLDKVTKSQSVSSFLGIKPQEKLMSNSDELRKLCKNNVRTFYHYHGGCIVG--- 468 (523)
Q Consensus 392 ~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG--- 468 (523)
+.+.|.|+++|+.++.|.+.+.++++.+++++.+..+..+...+..|....+++++++|++....+.+|++||||||
T Consensus 394 p~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~~~pg~~~~~~~~~~~ir~~~~t~~H~~GTcrMG~d~ 473 (526)
T 3t37_A 394 LGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWRERELLPGTPNSAAEMDDFIARSVITHHHPCGTCRMGKDP 473 (526)
T ss_dssp TTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEECSSCCCCSHHHHHHHHHHHEEECSCCBCTTCBCSST
T ss_pred CccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhccccccCCCCCCCHHHHHHHHHhcCccCcccCccccCCCCC
Confidence 99999999999999999999999999999999998888777666677777889999999999999999999999999
Q ss_pred -cccCCCCcEeccCCcEEeeccccCCCCCCCcHHHHHHHHHHHHHHHHH
Q 009873 469 -SVVDKDYRVYGVKGLRVIDGSTFQESPGTNPMATVMMLGRYQGVKLVE 516 (523)
Q Consensus 469 -~VvD~~~rv~g~~nL~V~D~Sv~P~~~~~nPtlTi~Ala~r~a~~i~~ 516 (523)
+|||++|||||++||||||+||||+++++||++|+||||||+||+.-.
T Consensus 474 ~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~~~ 522 (526)
T 3t37_A 474 DAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQYHH 522 (526)
T ss_dssp TCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHhhc
Confidence 799999999999999999999999999999999999999999998643
No 6
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=7.5e-70 Score=581.96 Aligned_cols=455 Identities=22% Similarity=0.324 Sum_probs=348.0
Q ss_pred ccCCcccEEEECCCCchHHHHhhhhc--cCeeEEEecCCCCCCCCCcc-ccchhccccCC--CCCCccccccCcCCCcee
Q 009873 49 VAGKSFDYIVVGGGTTGCPLAATLSD--NFSVLLVERGGSPFGNPLVT-DKRFFGFSLLQ--TDEYTSVAQSFISTDGVQ 123 (523)
Q Consensus 49 ~~~~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvlE~G~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 123 (523)
+...+|||||||+|.+|+++|.+|++ +.+|+|||+|.....++... .+..+...+.. .+.|.+.+ ...++.+.
T Consensus 20 ~~~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p--~~~~~~~~ 97 (587)
T 1gpe_A 20 VAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP--LINNRTNN 97 (587)
T ss_dssp TTTCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC--CTTSCCCE
T ss_pred cCcccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc--CCCCceee
Confidence 33568999999999999999999998 69999999998554333333 33333222211 12233333 34566788
Q ss_pred ecCceecccccccCCccccCCChhhHhh-------CCCCHHHHHHHhHhhhccccC-----------C--------C---
Q 009873 124 NHRGRVLGGSSAINGGFYSRAREDFVKK-------AGWDEELVKKAYEWVESKVVF-----------P--------P--- 174 (523)
Q Consensus 124 ~~~g~~lGG~s~~~~~~~~r~~~~~~~~-------~~w~~~~~~~~~~~~~~~~~~-----------~--------p--- 174 (523)
+.+|++|||+|++|+|++.|+.+.+++. .+|+++++.+||+++|+.... . |
T Consensus 98 ~~rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~v 177 (587)
T 1gpe_A 98 IKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQS 177 (587)
T ss_dssp ECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEEE
T ss_pred eeccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEEE
Confidence 9999999999999999999998866653 369999999999999987642 1 1
Q ss_pred -------CCChhHHHHHHHHHHcCCCCCCCCCcCCCCcceeeeeEEcCCCeeechHh-hhh-hCCCCCeEEEeccEEEEE
Q 009873 175 -------ELTPWQSVVEFGLLEAGILPYNGYSLEHIEGTKIGGTAFDQCGKRHTSAD-LLE-AGNPKNLVVLLNATVNNI 245 (523)
Q Consensus 175 -------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~l~-~~~~~g~~i~~~~~V~~l 245 (523)
...+..+.+.++++++|++...+.......|+....+..+..|.|+++.. ++. .++++|++|++++.|++|
T Consensus 178 ~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l 257 (587)
T 1gpe_A 178 GARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKV 257 (587)
T ss_dssp BCCCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEE
T ss_pred ccCCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEE
Confidence 23566788999999999865433322222333222222345688888765 454 667899999999999999
Q ss_pred EEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhCCCChhhhhhCCCCceecC
Q 009873 246 IFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSGIGPHDHLKDLNIPTIVDL 325 (523)
Q Consensus 246 ~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SGig~~~~l~~~gi~~~~~~ 325 (523)
+++++++ +.+|+||++.+.+|+ .+++.+ +|.||||||+++||+||++||||++++|+++||+++.++
T Consensus 258 ~~~~~~~--~~~~~GV~~~~~~g~---~~~v~A--------~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dl 324 (587)
T 1gpe_A 258 LFKQTAS--GPQAVGVNFGTNKAV---NFDVFA--------KHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDL 324 (587)
T ss_dssp EEEEETT--EEEEEEEEEEEETTE---EEEEEE--------EEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEEC
T ss_pred EECCCCC--CCEEEEEEEEeCCCc---EEEEEe--------cccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeC
Confidence 9985310 018999999865677 777876 699999999999999999999999999999999999999
Q ss_pred cccccccccCcCceEEEecCCCCCCCCCcce------------eee----------eecCC------CC-----------
Q 009873 326 QEVGEGMQDNPCIAKLVDTMPQKRLPEPPEV------------VAG----------VLPIS------SN----------- 366 (523)
Q Consensus 326 p~vG~~l~dh~~~~~~~~~~~~~~~~~~~~~------------~g~----------~~~~~------~~----------- 366 (523)
| ||+||+||+...+.+.............. .|. |.... ..
T Consensus 325 P-VG~nL~DH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (587)
T 1gpe_A 325 P-VGINMQDQTTTTVSSRASSAGAGQGQAVFFANFTETFGDYAPQARDLLNTKLDQWAEETVARGGFHNVTALKVQYENY 403 (587)
T ss_dssp C-TTCSBBCCEEEEEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHSHHHHHHHHHHTTSCSCHHHHHHHHHHH
T ss_pred C-CCcchhcCcccceEEEeCCCcccccchHHHHHHHHHHHhCCCCCccccccceeeEeecccccccccccccccccHHHH
Confidence 9 99999999988777544321110000000 000 11000 00
Q ss_pred ------------------CCcccEEeeecCcCcceEEEecCCCCCCCC-eeecCCCCChhhHHHHHHHHHHHHHHhcccc
Q 009873 367 ------------------ASRMPIAAKLAFPISKGKLELDSTDPRQNP-SIKFNYLAKEKDLHECVKMVQLLDKVTKSQS 427 (523)
Q Consensus 367 ------------------~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p-~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 427 (523)
...+.+...+++|.|||+|+|+++|+++.| .|+++|+.++.|++.+.++++.+++++++.+
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~ 483 (587)
T 1gpe_A 404 RNWLLDEDVAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGA 483 (587)
T ss_dssp HHHHHHSCCEEEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTT
T ss_pred hhhccCCCCcceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcc
Confidence 001234556679999999999999999999 9999999999999999999999999999988
Q ss_pred cccccCCCCCCC----CCCCHHHHHHHHHcccccccccccceecc-----cccCCCCcEeccCCcEEeeccccCCCCCCC
Q 009873 428 VSSFLGIKPQEK----LMSNSDELRKLCKNNVRTFYHYHGGCIVG-----SVVDKDYRVYGVKGLRVIDGSTFQESPGTN 498 (523)
Q Consensus 428 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG-----~VvD~~~rv~g~~nL~V~D~Sv~P~~~~~n 498 (523)
+..+...+..|. ...++++|++|++....+.+|++|||+|| +|||++|||||++||||+|+||||+++++|
T Consensus 484 ~~~~~~~~~~pg~~~~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~~sVVD~~lrV~Gv~nLrVvDaSv~P~~~~~N 563 (587)
T 1gpe_A 484 MKEYFAGETLPGYNLVQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRELGGVVDATAKVYGTQGLRVIDGSIPPTQVSSH 563 (587)
T ss_dssp HHHHEEEEEESGGGSCTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEEECSTTCCSSCCSSC
T ss_pred hhhhcccccCCCccccCCCCHHHHHHHHHHhcCcccCccCccccCCCCCCceECCCCEEECCCCcEEeeeccCCCCCCcc
Confidence 877653332232 12688999999999999999999999999 599999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHh
Q 009873 499 PMATVMMLGRYQGVKLVEERR 519 (523)
Q Consensus 499 PtlTi~Ala~r~a~~i~~~~~ 519 (523)
|++|+||||+|+||.|+++..
T Consensus 564 p~~ti~aiAeraAd~I~~~~~ 584 (587)
T 1gpe_A 564 VMTIFYGMALKVADAILDDYA 584 (587)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999998763
No 7
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=4.7e-68 Score=564.30 Aligned_cols=449 Identities=27% Similarity=0.392 Sum_probs=343.2
Q ss_pred cCCcccEEEECCCCchHHHHhhhhc--cCeeEEEecCCCCCCCCCccccchhccccC--CCCCCccccccCcCCCceeec
Q 009873 50 AGKSFDYIVVGGGTTGCPLAATLSD--NFSVLLVERGGSPFGNPLVTDKRFFGFSLL--QTDEYTSVAQSFISTDGVQNH 125 (523)
Q Consensus 50 ~~~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvlE~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 125 (523)
...+|||||||+|.+|+++|.+|++ +.+|+|||+|......+....+..+...+. ..+.|.+.++.. ..+.+.+.
T Consensus 10 ~~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-~~~~~~~~ 88 (546)
T 2jbv_A 10 SDREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-GNSFMRHA 88 (546)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-SCTTCEEC
T ss_pred ccCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-CCceEEee
Confidence 3467999999999999999999998 589999999975432122222222322221 122455566666 56778899
Q ss_pred CceecccccccCCccccCCChhhHhh-------CCCCHHHHHHHhHhhhcccc------C-----------CCCCChhHH
Q 009873 126 RGRVLGGSSAINGGFYSRAREDFVKK-------AGWDEELVKKAYEWVESKVV------F-----------PPELTPWQS 181 (523)
Q Consensus 126 ~g~~lGG~s~~~~~~~~r~~~~~~~~-------~~w~~~~~~~~~~~~~~~~~------~-----------~p~~~~~~~ 181 (523)
+|++|||+|.+|++.+.|+.+.+++. .+|.++++.+||+++|+... + .+...+..+
T Consensus 89 rGk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~~~~~~g~~Gpl~v~~~~~~~~~~~ 168 (546)
T 2jbv_A 89 RAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGPDAPHHGDSGPVHLMNVPPKDPTGV 168 (546)
T ss_dssp CBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBTTBTTSCBSCSEEEEECCSCCHHHH
T ss_pred cccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCCccccCCCCCCEEEecCCCCCHHHH
Confidence 99999999999999999998755532 36999999999999998654 1 113456778
Q ss_pred HHHHHHHHcCCCCCCCCCcCC--CCcceeeeeEEcC-CCeeechHhh-hh-hCCCCCeEEEeccEEEEEEEcCCCCCCCc
Q 009873 182 VVEFGLLEAGILPYNGYSLEH--IEGTKIGGTAFDQ-CGKRHTSADL-LE-AGNPKNLVVLLNATVNNIIFSNNGKANES 256 (523)
Q Consensus 182 ~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~-~g~~~~~~~~-l~-~~~~~g~~i~~~~~V~~l~~~~~g~~~~~ 256 (523)
.+.++++++|++.. +..... ..++..... .+. .|.|+++... +. +.++.|++|++++.|++|++++++
T Consensus 169 ~~~~a~~~~G~~~~-d~n~~~~~~~g~~~~~~-~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~----- 241 (546)
T 2jbv_A 169 ALLDACEQAGIPRA-KFNTGTTVVNGANFFQI-NRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDADR----- 241 (546)
T ss_dssp HHHHHHHHTTCCBC-CSSSSSCCSSEEEECEE-CBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTTS-----
T ss_pred HHHHHHHHCCCCcc-CCCCCCcCcceEEeeee-ecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCCC-----
Confidence 88899999998644 322111 222211111 134 7888876554 55 445789999999999999998732
Q ss_pred eeeEEEEEecC-CCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhCCCChhhhhhCCCCceecCcccccccccC
Q 009873 257 RAHGIRFIKSD-GSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSGIGPHDHLKDLNIPTIVDLQEVGEGMQDN 335 (523)
Q Consensus 257 ~v~GV~~~~~~-g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SGig~~~~l~~~gi~~~~~~p~vG~~l~dh 335 (523)
+++||++.+.. |+ .+++.+ +|.||||||+++||+||++||||+.++|+++||+++.++|+||+||+||
T Consensus 242 ~~~GV~~~~~~~g~---~~~i~A--------~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH 310 (546)
T 2jbv_A 242 RCTGVDIVDSAFGH---THRLTA--------RNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDH 310 (546)
T ss_dssp BEEEEEEESSTTSC---EEEEEE--------EEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCC
T ss_pred eEEEEEEEECCCCc---EEEEEe--------CccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhC
Confidence 89999998632 66 678887 4599999999999999999999999999999999999999999999999
Q ss_pred cCceEEEecCCCCCCC---CCcceee--------------e-eecCCC-------C----CCcccEEeeecCcCcceEEE
Q 009873 336 PCIAKLVDTMPQKRLP---EPPEVVA--------------G-VLPISS-------N----ASRMPIAAKLAFPISKGKLE 386 (523)
Q Consensus 336 ~~~~~~~~~~~~~~~~---~~~~~~g--------------~-~~~~~~-------~----~~~~~~~~~~~~p~s~g~v~ 386 (523)
+...+.+..... ... ......+ + +.+... + ...+.+...+..|.|+|+|+
T Consensus 311 ~~~~~~~~~~~~-~~~~~~~~~~~~~f~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~srG~V~ 389 (546)
T 2jbv_A 311 PEGVVQFEAKQP-MVAESTQWWEIGIFTPTEDGLDRPDLMMHYGSVPFDMNTLRHGYPTTENGFSLTPNVTHARSRGTVR 389 (546)
T ss_dssp EECCEEEEESSC-CCSCCSSSCCEEEEECSSTTCSSCSEEEEEESSCCCTTTGGGTCCCCSSEEEEEEEETTCCCCBEEE
T ss_pred ccceEEEEecCC-CcccccchhheEEEEecCCCCCCCceEEEeccccccccccccCccCCCCeEEEEEEEcccCcccEEE
Confidence 988776544321 111 0000000 1 111111 1 11234556778999999999
Q ss_pred ecCCCCCCCCeeecCCCCChh--hHHHHHHHHHHHHHHhcccccccccCCCCCCC-CCCCHHHHHHHHHccccccccccc
Q 009873 387 LDSTDPRQNPSIKFNYLAKEK--DLHECVKMVQLLDKVTKSQSVSSFLGIKPQEK-LMSNSDELRKLCKNNVRTFYHYHG 463 (523)
Q Consensus 387 l~~~d~~~~p~i~~~~~~~~~--D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~H~~G 463 (523)
|+++||++.|.|+++|+.++. |++.+.++++.+++++++.++..+...+..|. ...++++|++|++....+.+|++|
T Consensus 390 L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~p~~~~~sd~~~~~~ir~~~~~~~H~~G 469 (546)
T 2jbv_A 390 LRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGRELSPGVEAQTDEELQDYIRKTHNTVYHPVG 469 (546)
T ss_dssp CSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEEEESCTTCCSHHHHHHHHHHHCEECSCCBC
T ss_pred ecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhcccccccCCCCCCCHHHHHHHHHhcCCccccccc
Confidence 999999999999999999999 99999999999999999998877654333332 456889999999998899999999
Q ss_pred ceecc------cccCCCCcEeccCCcEEeeccccCCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 009873 464 GCIVG------SVVDKDYRVYGVKGLRVIDGSTFQESPGTNPMATVMMLGRYQGVKLVEER 518 (523)
Q Consensus 464 t~~MG------~VvD~~~rv~g~~nL~V~D~Sv~P~~~~~nPtlTi~Ala~r~a~~i~~~~ 518 (523)
||+|| +|||++|||||++||||+|+||||+++++||++|+||||+|+|+.|+++.
T Consensus 470 TcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~ 530 (546)
T 2jbv_A 470 TVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIRSAR 530 (546)
T ss_dssp TTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC----
T ss_pred ccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHhhc
Confidence 99999 79999999999999999999999999999999999999999999998764
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=3.6e-58 Score=490.42 Aligned_cols=442 Identities=21% Similarity=0.267 Sum_probs=303.4
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCCCCCccccchhc--cc---cCCCCCCc---cccccCcCCCc
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFGNPLVTDKRFFG--FS---LLQTDEYT---SVAQSFISTDG 121 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~~~~~~~~~~~~--~~---~~~~~~~~---~~~~~~~~~~~ 121 (523)
+.+|||||||||++|+++|.+|++ |++|+|||+|..............|. .. +.....+. ..+........
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 84 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNPFWWCKD 84 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCSCCTTBCTT
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcCCCccccccc
Confidence 457999999999999999999999 89999999997432100000000000 00 00000000 00000011123
Q ss_pred eeecCceecccccccCCccccCCChhhHhh---C--CCCHHHHHHHhHhhhccccCC--C------CCChhHHHHHHHHH
Q 009873 122 VQNHRGRVLGGSSAINGGFYSRAREDFVKK---A--GWDEELVKKAYEWVESKVVFP--P------ELTPWQSVVEFGLL 188 (523)
Q Consensus 122 ~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~---~--~w~~~~~~~~~~~~~~~~~~~--p------~~~~~~~~~~~~~~ 188 (523)
..+.+++.+||+|.+|++.+.|+.+.+++. + +|.+++ ++|++.++..... + ...+....+.++++
T Consensus 85 ~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~~~w~~~~--p~~~k~e~~~~~~~~~~~~g~~~~~~~~~~~~~a~~ 162 (546)
T 1kdg_A 85 ITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHA--PYTSKLSSRLPSTDHPSTDGQRYLEQSFNVVSQLLK 162 (546)
T ss_dssp BSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCCGGGSCCH--HHHHHHHHHSCCBSCCSTTSCCCSCHHHHHHHHHHH
T ss_pred cccccceeecccccccceEEecCChHHhcCcccCccccCccc--HHHHHHHhcCCCCccCCCCCCccCCHHHHHHHHHHH
Confidence 456789999999999999999988766543 2 355555 8888887743211 1 12345567778888
Q ss_pred HcCCCCCCCC-Cc-CCCCcceeeeeEEcCCCeeechHh-hhh-hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEE
Q 009873 189 EAGILPYNGY-SL-EHIEGTKIGGTAFDQCGKRHTSAD-LLE-AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFI 264 (523)
Q Consensus 189 ~~g~~~~~~~-~~-~~~~~~~~~~~~~~~~g~~~~~~~-~l~-~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~ 264 (523)
+.|++..... .. ....+.....+. +.+|.|+++.. ++. +.+++|++|++++.|++|+++++ +++||++.
T Consensus 163 ~~G~~~~~~~~~~~~~~~g~~~~~~~-~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~------~~~gV~~~ 235 (546)
T 1kdg_A 163 GQGYNQATINDNPNYKDHVFGYSAFD-FLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGS------QILGVQTN 235 (546)
T ss_dssp TTTCEECCGGGSTTCCTTEEEECCBC-EETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETT------EEEEEEES
T ss_pred HCCCCcCCccCCcCCCCcEEeeeeec-cCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCC------EEEEEEEE
Confidence 8887432100 00 011121111111 24678887654 455 45568999999999999999865 99999987
Q ss_pred ec-CCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhCCCChhhhhhC------CCCce-----ecCccccccc
Q 009873 265 KS-DGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSGIGPHDHLKDL------NIPTI-----VDLQEVGEGM 332 (523)
Q Consensus 265 ~~-~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SGig~~~~l~~~------gi~~~-----~~~p~vG~~l 332 (523)
+. +|+. ...++.+ ++.||||||+++||+||++||||+.++|+++ ||+++ .++| ||+||
T Consensus 236 ~~~~g~~-~~~~v~~--------~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlp-VG~nL 305 (546)
T 1kdg_A 236 DPTLGPN-GFIPVTP--------KGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLP-VGMNA 305 (546)
T ss_dssp CTTSSGG-GEEEEEE--------EEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCC-TTTTB
T ss_pred ecCCCce-eEEEEEe--------CCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCC-cccCc
Confidence 63 3540 0123433 5999999999999999999999999999999 58874 7999 99999
Q ss_pred ccCcCceEEEecCCCC---------CCCCC---------------cc---eeeeee--cCCC------------------
Q 009873 333 QDNPCIAKLVDTMPQK---------RLPEP---------------PE---VVAGVL--PISS------------------ 365 (523)
Q Consensus 333 ~dh~~~~~~~~~~~~~---------~~~~~---------------~~---~~g~~~--~~~~------------------ 365 (523)
+||+...+.+. .+.. ..... .. ..+++. +...
T Consensus 306 ~DH~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (546)
T 1kdg_A 306 QDNPSINLVFT-HPSIDAYENWADVWSNPRPADAAQYLANQSGVFAGASPKLNFWRAYSGSDGFTRYAQGTVRPGAASVN 384 (546)
T ss_dssp BCCCCEEEEEE-CTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGSCSCCEEEEEEEECTTSCEEEEEEEEEESCSCCC
T ss_pred ccCcceeEEEe-cCCcccccchhhhhcchhHHHHHHHHHcCCcccccCCcceEEEEccCCCCcchhhhhheecccccccc
Confidence 99998877754 2111 00000 00 001110 0000
Q ss_pred C------CCcccEEeeecCc-CcceEEEecCCCCCCCCeeecCCCCChhhHHHHHHHHHHHHHHhcccccccccCCCCCC
Q 009873 366 N------ASRMPIAAKLAFP-ISKGKLELDSTDPRQNPSIKFNYLAKEKDLHECVKMVQLLDKVTKSQSVSSFLGIKPQE 438 (523)
Q Consensus 366 ~------~~~~~~~~~~~~p-~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 438 (523)
+ ...+.+...+..| .|+|+|+|++.| ..|.++.+|+.++.|++.+.++++.+++++++.+...+. .|
T Consensus 385 ~~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~----~p 458 (546)
T 1kdg_A 385 SSLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQALHDVVSNIGSIPGLTMI----TP 458 (546)
T ss_dssp CSSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHHHHHHHTTTGGGSTTCEEE----ES
T ss_pred cccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHHHHHHHHHHhcCCCccccc----CC
Confidence 0 0112334455677 999999999876 456788899999999999999999999999887533211 12
Q ss_pred CCCCCHHHHHHHHHcccccccccccceecc-----cccCCCCcEeccCCcEEeeccccCCCCCCCcHHHHHHHHHHHHHH
Q 009873 439 KLMSNSDELRKLCKNNVRTFYHYHGGCIVG-----SVVDKDYRVYGVKGLRVIDGSTFQESPGTNPMATVMMLGRYQGVK 513 (523)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG-----~VvD~~~rv~g~~nL~V~D~Sv~P~~~~~nPtlTi~Ala~r~a~~ 513 (523)
....++++++++++....+.+|++|||+|| +|||++|||||++||||+|+||||+++++||++|+||||+|+||.
T Consensus 459 ~~~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~ 538 (546)
T 1kdg_A 459 DVTQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQSAVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAK 538 (546)
T ss_dssp CTTSCHHHHHHHSCGGGGCCSCCBCTTCBCSCTTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCSHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhcCcccccccceecCCCCCCeeECCCCeEccCCCcEEeEecccCCCCCccHHHHHHHHHHHHHHH
Confidence 223577888888888888999999999999 799999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 009873 514 LVEER 518 (523)
Q Consensus 514 i~~~~ 518 (523)
|+++.
T Consensus 539 I~~~~ 543 (546)
T 1kdg_A 539 ILALA 543 (546)
T ss_dssp HHHST
T ss_pred HHhhc
Confidence 98753
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=2.8e-57 Score=477.86 Aligned_cols=419 Identities=19% Similarity=0.219 Sum_probs=293.4
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCC-CCCCccccchhcccc-CCCCCCccccc--------------
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPF-GNPLVTDKRFFGFSL-LQTDEYTSVAQ-------------- 114 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~-------------- 114 (523)
.+|||||||+|.+|+++|.+|++ |.+|+|||+|.... ..+....+....... .....|.+.++
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~t~p~~~~~~l~~~~~~~~ 83 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNRN 83 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCCCCCTTSSSSCCTTSCCGGGSBSCSBCCCCTTCHHHHGGGCCB
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCCCCCcccccccccccCcccccccccccccccccccccccccc
Confidence 46999999999999999999999 89999999998433 122222221110000 00112333232
Q ss_pred --cCc------CCCceeecCceecccccccCCccccCCChhhHhh--CCCCHHHHH-HHhHhhhccccCCCCC-------
Q 009873 115 --SFI------STDGVQNHRGRVLGGSSAINGGFYSRAREDFVKK--AGWDEELVK-KAYEWVESKVVFPPEL------- 176 (523)
Q Consensus 115 --~~~------~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~--~~w~~~~~~-~~~~~~~~~~~~~p~~------- 176 (523)
.+. ..+.+.+.+|++|||+|.+|+|++.|+.+.+++. .+|.++++. +||+++|+.+...+..
T Consensus 84 ~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~~~~ 163 (504)
T 1n4w_A 84 IDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDT 163 (504)
T ss_dssp CCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHHC
T ss_pred ccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhccccchhhhhhHHHHHHHHHhCCCCCCcccccCC
Confidence 222 3456778899999999999999999999877764 468889999 9999999987643311
Q ss_pred --ChhHHHHHHHHHHcCCCCCCCCCcCC-----------CCcce-eeee-EEcCCCeeechHh-hhh-hCCCCCeEEEec
Q 009873 177 --TPWQSVVEFGLLEAGILPYNGYSLEH-----------IEGTK-IGGT-AFDQCGKRHTSAD-LLE-AGNPKNLVVLLN 239 (523)
Q Consensus 177 --~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~-~~~~-~~~~~g~~~~~~~-~l~-~~~~~g~~i~~~ 239 (523)
.+..+.+.++++++|+.+.......+ ...+. .+.| .-|..| |+++.. ++. +.++.|++|+++
T Consensus 164 ~~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~l~~a~~~~n~~i~~~ 242 (504)
T 1n4w_A 164 EWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTYLAAALGTGKVTIQTL 242 (504)
T ss_dssp GGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTHHHHHHHTTSEEEEES
T ss_pred CcchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHHHHHHHHHhcCCcEEEeC
Confidence 24567788889999984211100000 00000 0111 124677 877543 455 445668999999
Q ss_pred cEEEEEEEcCCCCCCCceeeEEEEEecCC---CCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC-CCChhhhh
Q 009873 240 ATVNNIIFSNNGKANESRAHGIRFIKSDG---SSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG-IGPHDHLK 315 (523)
Q Consensus 240 ~~V~~l~~~~~g~~~~~~v~GV~~~~~~g---~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG-ig~~~~l~ 315 (523)
+.|++|+++++++ +++||++.+.+| + .+++.+ +.||||||+++||+||++|| +|
T Consensus 243 ~~V~~i~~~~~g~----~~~gV~~~~~~g~~~~---~~~v~A---------~~VIlaaG~~~s~~lL~~Sg~ig------ 300 (504)
T 1n4w_A 243 HQVKTIRQTKDGG----YALTVEQKDTDGKLLA---TKEISC---------RYLFLGAGSLGSTELLVRARDTG------ 300 (504)
T ss_dssp EEEEEEEECTTSS----EEEEEEEECTTCCEEE---EEEEEE---------EEEEECSHHHHHHHHHHHHHHTT------
T ss_pred CEEEEEEECCCCC----EEEEEEEeCCCCccce---eEEEee---------CEEEEccCCCCCHHHHHhccccC------
Confidence 9999999986433 899999986556 4 567887 79999999999999999999 87
Q ss_pred hCCCCceecCcccccccccCcCceEEEecCC-CCCCC--CCcceeeeeecCC--------------CC-CCcccEEeeec
Q 009873 316 DLNIPTIVDLQEVGEGMQDNPCIAKLVDTMP-QKRLP--EPPEVVAGVLPIS--------------SN-ASRMPIAAKLA 377 (523)
Q Consensus 316 ~~gi~~~~~~p~vG~~l~dh~~~~~~~~~~~-~~~~~--~~~~~~g~~~~~~--------------~~-~~~~~~~~~~~ 377 (523)
+|+.+ ++.||+||+||+...+.+...+ ++... ......++ .... .. ...+.++..+.
T Consensus 301 --~i~~~--~~~VG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (504)
T 1n4w_A 301 --TLPNL--NSEVGAGWGPNGNIMTARANHMWNPTGAHQSSIPALGI-DAWDNSDSSVFAEIAPMPAGLETWVSLYLAIT 375 (504)
T ss_dssp --SSTTC--CTTTTCCBBCTTCEEEEEECCTTCCCCSCCCSSCCEEE-EECCSSTTCEEEEEECCCCSSCCCEEEEEEEE
T ss_pred --CCCCC--ChhhccccccCCcceeeeccCCCCcccCcCCCccEEEE-eccCCCCCceEEEeccCChHHHhhhhhheeee
Confidence 45543 4579999999998765533221 11000 00111111 1100 00 01233455667
Q ss_pred CcCcceEEEecCCCCCCCCeeecCCCCChhhHHHHHHHHH-HHHHHhcccccccccCCCCCCCCCCCHHHHHHHHHc---
Q 009873 378 FPISKGKLELDSTDPRQNPSIKFNYLAKEKDLHECVKMVQ-LLDKVTKSQSVSSFLGIKPQEKLMSNSDELRKLCKN--- 453 (523)
Q Consensus 378 ~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 453 (523)
.|.++|+|+|+++|+ .|+++|+.++ | +.+.++++ .++++++..+. +... +. ++++
T Consensus 376 ~p~srG~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~~~---~~----------~~~~~~~ 434 (504)
T 1n4w_A 376 KNPQRGTFVYDAATD----RAKLNWTRDQ-N-APAVNAAKALFDRINKANGT--IYRY---DL----------FGTQLKA 434 (504)
T ss_dssp CCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CBCC---SS----------SSSSCCS
T ss_pred ccCCCcEEEecCCCC----ceEeccCCCc-C-HHHHHHHHHHHHHHHhccCC--CcCC---ch----------hhhhhhh
Confidence 899999999998653 7899999999 8 77888888 88888887663 1100 00 1111
Q ss_pred -ccccccccccceecccccCCCCcEeccCCcEEeeccccCCCCCCCcHHHHHHHHHHHHHHHHHHHh
Q 009873 454 -NVRTFYHYHGGCIVGSVVDKDYRVYGVKGLRVIDGSTFQESPGTNPMATVMMLGRYQGVKLVEERR 519 (523)
Q Consensus 454 -~~~~~~H~~Gt~~MG~VvD~~~rv~g~~nL~V~D~Sv~P~~~~~nPtlTi~Ala~r~a~~i~~~~~ 519 (523)
...+.+|++|||+||+|||++|||||++||||+|+||||+++++||++|+||||+|+|+.|++++.
T Consensus 435 ~~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 435 FADDFCYHPLGGCVLGKATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDV 501 (504)
T ss_dssp EECSEESSCBCSSCTTTTBCTTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC
T ss_pred hccCccccccCCceeeeEECCCCeEeccCCeEEeeccccCCCCCcChHHHHHHHHHHHHHHHHHhhc
Confidence 456789999999999999999999999999999999999999999999999999999999998865
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=3.8e-57 Score=476.89 Aligned_cols=426 Identities=16% Similarity=0.200 Sum_probs=290.4
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCC-CCCccccchhcccc-C---CCCCCccccc----------
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFG-NPLVTDKRFFGFSL-L---QTDEYTSVAQ---------- 114 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~-~~~~~~~~~~~~~~-~---~~~~~~~~~~---------- 114 (523)
..+||+||||+|.+|+++|.+|++ +.+|+|||+|..... .+.. ..+.... . ..+.|.+.+|
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~p~~---~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~~ 85 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSWDTPGSDG---KIFCGMLNPDKRSMWLADKTDQPVSNFMGFGI 85 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCSCSCCTTS---CSSCCSSSCCTTSBBSCSBCCCSSCSBTTBSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCCCCcc---cccccccccccccccccccccccccccccccc
Confidence 457999999999999999999999 899999999974321 1100 0111111 0 1112334343
Q ss_pred -----cCc------CCCceeecCceecccccccCCccccCCChhhHhh--CCCCHHHHH-HHhHhhhccccCCCC-----
Q 009873 115 -----SFI------STDGVQNHRGRVLGGSSAINGGFYSRAREDFVKK--AGWDEELVK-KAYEWVESKVVFPPE----- 175 (523)
Q Consensus 115 -----~~~------~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~--~~w~~~~~~-~~~~~~~~~~~~~p~----- 175 (523)
.+. .++.+.+.+|++|||+|++|+|++.|+.+.+++. .+|.++++. +||+++|+.+...+.
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~ 165 (507)
T 1coy_A 86 NKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAWF 165 (507)
T ss_dssp CCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHH
T ss_pred ccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhCCccchhcchhHHHHHHHHHhCCCCCCCccc
Confidence 222 4456778899999999999999999999877764 368889999 999999998765431
Q ss_pred ----CChhHHHHHHHHHHcCCCCCCCCCcCC-----------CCcc-eeeee-EEcCCCeeechHh-hhh-hCCCCCeEE
Q 009873 176 ----LTPWQSVVEFGLLEAGILPYNGYSLEH-----------IEGT-KIGGT-AFDQCGKRHTSAD-LLE-AGNPKNLVV 236 (523)
Q Consensus 176 ----~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~-~~~~~-~~~~~g~~~~~~~-~l~-~~~~~g~~i 236 (523)
..+..+.+.++++++|+.+.......+ ...+ ..+.| .-|..| |+++.. ++. +.++.|++|
T Consensus 166 ~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc~~g-R~s~~~~~l~~a~~~~n~~i 244 (507)
T 1coy_A 166 ESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAG-KKSLDKTYLAQAAATGKLTI 244 (507)
T ss_dssp HHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCCSSS-BCCTTTTHHHHHHHTTCEEE
T ss_pred cccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccCCCC-CcChHHHHHHHHHhcCCcEE
Confidence 134567788889999984211100000 0000 00111 114567 877544 455 445678999
Q ss_pred EeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC-CCChhhhh
Q 009873 237 LLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG-IGPHDHLK 315 (523)
Q Consensus 237 ~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG-ig~~~~l~ 315 (523)
++++.|++|++++++. +++||++.+.+|+....+++.+ +.||||||+++||+||++|| +|..+
T Consensus 245 ~~~~~v~~i~~~~~g~----~~~gV~~~~~~g~~~~~~~~~A---------~~VIlaaGa~~sp~lL~~Sg~iG~lp--- 308 (507)
T 1coy_A 245 TTLHRVTKVAPATGSG----YSVTMEQIDEQGNVVATKVVTA---------DRVFFAAGSVGTSKLLVSMKAQGHLP--- 308 (507)
T ss_dssp ECSEEEEEEEECSSSS----EEEEEEEECTTSCEEEEEEEEE---------EEEEECSHHHHHHHHHHHHHHTTSST---
T ss_pred EeCCEEEEEEECCCCC----EEEEEEEeCCCCcccccEEEEe---------CEEEEccCccCCHHHHHhcccCCCCC---
Confidence 9999999999987432 7999999864452000467887 79999999999999999999 87421
Q ss_pred hCCCCceecCcccccccccCcCceEEEecCC-CCCCC--CCcceeee-eecC----------CC--C-CCcccEEeeecC
Q 009873 316 DLNIPTIVDLQEVGEGMQDNPCIAKLVDTMP-QKRLP--EPPEVVAG-VLPI----------SS--N-ASRMPIAAKLAF 378 (523)
Q Consensus 316 ~~gi~~~~~~p~vG~~l~dh~~~~~~~~~~~-~~~~~--~~~~~~g~-~~~~----------~~--~-~~~~~~~~~~~~ 378 (523)
...+.||+||++|+.....+.... ++... ......++ ++.. .. . ...+.++..+..
T Consensus 309 -------nl~d~VG~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (507)
T 1coy_A 309 -------NLSSQVGEGWGNNGNIMVGRANHMWDATGSKQATIPTMGIDNWADPTAPIFAEIAPLPAGLETYVSLYLAITK 381 (507)
T ss_dssp -------TSCTTTTCCBBCTTEEEEEEECCTTSCCCSCCCSSCCEEEECTTCTTSCEEEEEECCCCSSCCCEEEEEEEEC
T ss_pred -------ccChhhCCccccCCcccccccccccccccccCCCcceEEEeccCCCCCCcEEEeccCCHHHhhheeeeEEEee
Confidence 224579999999986433211111 11100 00111111 1100 00 0 012334456678
Q ss_pred cCcceEEEecCCCCCCCCeeecCCCCChhhHHHHHHHHH-HHHHHhcccccccccCCCCCCCCCCCHHHHHHHHHccccc
Q 009873 379 PISKGKLELDSTDPRQNPSIKFNYLAKEKDLHECVKMVQ-LLDKVTKSQSVSSFLGIKPQEKLMSNSDELRKLCKNNVRT 457 (523)
Q Consensus 379 p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (523)
|.++|+|+|+++|+ .|+++|+.++ | +.+.++++ .++++++..+. +...+. ..+++ ++| ...+
T Consensus 382 p~s~G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~~~~~----~~~d~--~~~---~~~~ 444 (507)
T 1coy_A 382 NPERARFQFNSGTG----KVDLTWAQSQ-N-QKGIDMAKKVFDKINQKEGT--IYRTDL----FGVYY--KTW---GDDF 444 (507)
T ss_dssp CCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CBCSSC----C--CC--CSS---BCSE
T ss_pred eCCCcEEEEccCCC----ceeeccCCCC-c-HHHHHHHHHHHHHHHhhcCC--cccCcc----cccch--hhh---cccc
Confidence 99999999998654 8999999999 8 45666666 88999988762 222111 01111 112 4567
Q ss_pred ccccccceecccccCCCCcEeccCCcEEeeccccCCCCCCCcHHHHHHHHHHHHHHHHHHHhh
Q 009873 458 FYHYHGGCIVGSVVDKDYRVYGVKGLRVIDGSTFQESPGTNPMATVMMLGRYQGVKLVEERRE 520 (523)
Q Consensus 458 ~~H~~Gt~~MG~VvD~~~rv~g~~nL~V~D~Sv~P~~~~~nPtlTi~Ala~r~a~~i~~~~~~ 520 (523)
.+|++|||+||+|||++|||||++||||+|+||||+++++||++|+||||+|+||.|++++++
T Consensus 445 ~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti~alAeraAd~I~~~~~~ 507 (507)
T 1coy_A 445 TYHPLGGVLLNKATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISSDIQ 507 (507)
T ss_dssp ESCCBCSSCTTTTSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHTC-
T ss_pred cccccCCcchhheECCCCeEeccCCeEEeechhccCCCCcChHHHHHHHHHHHHHHHHHHhcC
Confidence 899999999999999999999999999999999999999999999999999999999998764
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=3.4e-46 Score=400.99 Aligned_cols=430 Identities=17% Similarity=0.143 Sum_probs=277.0
Q ss_pred cCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCCCCCccc-cchh---------c----cccCC---------
Q 009873 50 AGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFGNPLVTD-KRFF---------G----FSLLQ--------- 105 (523)
Q Consensus 50 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~~~~~~~-~~~~---------~----~~~~~--------- 105 (523)
+..+|||||||||++|+++|+.|++ |++|+||||+....+...... ...+ . .....
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~~ 122 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLV 122 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCCC
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhccccccccc
Confidence 3467999999999999999999999 999999999985543110000 0000 0 00000
Q ss_pred -----------CCCC-ccccccC-cCCCce-eecCceecccccccCCccccCCChhhH--hhCCC---CHHHHHHHhHhh
Q 009873 106 -----------TDEY-TSVAQSF-ISTDGV-QNHRGRVLGGSSAINGGFYSRAREDFV--KKAGW---DEELVKKAYEWV 166 (523)
Q Consensus 106 -----------~~~~-~~~~~~~-~~~~~~-~~~~g~~lGG~s~~~~~~~~r~~~~~~--~~~~w---~~~~~~~~~~~~ 166 (523)
...+ ....... ...+.+ ....+..+||.+.+|.+...|...... ...+| ..+++.++|+..
T Consensus 123 ~~~~~~~~~~~~~v~l~~g~~~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e~~~~l~~~~v~~~~~l~~~~~~~ 202 (623)
T 3pl8_A 123 VDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKA 202 (623)
T ss_dssp CCCSCTTSCCCSSCCSCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGGSCCSSTTCHHHHHHHHHHHHHHH
T ss_pred cccccccccccCcEEeccCCCcccccchhhhhhcccccccCcceeeccccccCChHHhhhhhcccCccChhhHHHHHHHH
Confidence 0000 0000000 000000 112456789999999998887654321 01123 235666777766
Q ss_pred hccccCCCC--CChhH-HHHHHHHHHcCCCCCCCCCcCCCCcceeeeeEEcCCCeeechHh-hhh-h------CCCCCeE
Q 009873 167 ESKVVFPPE--LTPWQ-SVVEFGLLEAGILPYNGYSLEHIEGTKIGGTAFDQCGKRHTSAD-LLE-A------GNPKNLV 235 (523)
Q Consensus 167 ~~~~~~~p~--~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~l~-~------~~~~g~~ 235 (523)
+..+..... ..... ......+....... . .... .............++++.. ++. . .+++|++
T Consensus 203 ~~l~~vgg~~~~~~~~~~~~~~~l~~~~~~~-~--~~~~---~p~a~~~~~~~~~r~s~~~~~l~~~~~l~~~~~~~nv~ 276 (623)
T 3pl8_A 203 ESYFQTGTDQFKESIRHNLVLNKLTEEYKGQ-R--DFQQ---IPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFN 276 (623)
T ss_dssp HHHHTEESCTTTTCHHHHHHHHHHHHHTTTT-S--CCEE---CCEEEEEEETTEEEECCHHHHCCCCCEEETTEEEEEEE
T ss_pred HHhcccccccccCccccccchHHHHHhhhhc-c--cccc---cchhhccCCCCccccchHHhhhhhhhcchhhccCCCEE
Confidence 554432221 11111 11112222211100 0 0000 0011111122233444333 343 2 3456999
Q ss_pred EEeccEEEEEEEcCCCCCCCceeeEEEEEe-cCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhCCCChhhh
Q 009873 236 VLLNATVNNIIFSNNGKANESRAHGIRFIK-SDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSGIGPHDHL 314 (523)
Q Consensus 236 i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~-~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SGig~~~~l 314 (523)
|++++.|++|+++++++ +++||++.+ .+|+ .+++.+ +.||||+|++.||++|+.||+|+..++
T Consensus 277 v~~~~~V~~i~~~~~~~----~v~GV~~~~~~~g~---~~~i~A---------~~VIlaaG~~~s~~lL~~sgiG~~~~l 340 (623)
T 3pl8_A 277 LFPAVACERVVRNALNS----EIESLHIHDLISGD---RFEIKA---------DVYVLTAGAVHNTQLLVNSGFGQLGRP 340 (623)
T ss_dssp EECSEEEEEEEECTTSS----CEEEEEEEETTTCC---EEEECE---------EEEEECSCTTHHHHHHHTTTSSCCSSC
T ss_pred EEeCCEEEEEEEECCCC----EEEEEEEEEcCCCc---EEEEEC---------CEEEEcCCCcCCHHHHHhcCCCccccc
Confidence 99999999999986543 899999987 4577 777887 899999999999999999999999999
Q ss_pred hhCCCCceecCcccccccccCcCceEEEecCCC------------------CC----------CC---CCcc--------
Q 009873 315 KDLNIPTIVDLQEVGEGMQDNPCIAKLVDTMPQ------------------KR----------LP---EPPE-------- 355 (523)
Q Consensus 315 ~~~gi~~~~~~p~vG~~l~dh~~~~~~~~~~~~------------------~~----------~~---~~~~-------- 355 (523)
+.+||++ ++|+||+||+||+...+.+...++ .. .. .|..
T Consensus 341 ~~~~i~~--~l~~vG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~ 418 (623)
T 3pl8_A 341 NPANPPE--LLPSLGSYITEQSLVFCQTVMSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHPDWWNEKVKNHMMQ 418 (623)
T ss_dssp CTTSCCS--SCTTTTBSCBCCCEEEEEEEECHHHHHHHTTTCEEESCTTSTTCEEECCTTCTTCSSCHHHHHHHHHHHHH
T ss_pred cccCCCC--CCcccccchhhCcCceEEEEECCcccccccccccccccCCCcceecccccCcccccCCchhhhhhhhhhhc
Confidence 9999998 999999999999988776544321 00 00 0000
Q ss_pred ----ee---------eeeecC------------------CCCCC---c--c-cEEeeecCcCcceEEEecC--CCCCCCC
Q 009873 356 ----VV---------AGVLPI------------------SSNAS---R--M-PIAAKLAFPISKGKLELDS--TDPRQNP 396 (523)
Q Consensus 356 ----~~---------g~~~~~------------------~~~~~---~--~-~~~~~~~~p~s~g~v~l~~--~d~~~~p 396 (523)
.. -.+.+. .++.. . . -.......|.++|+|+|++ +|++|.|
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~n~v~L~~~~~D~~g~P 498 (623)
T 3pl8_A 419 HQEDPLPIPFEDPEPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRLIVDWRFFGRTEPKEENKLWFSDKITDAYNMP 498 (623)
T ss_dssp CTTCCCSSCTTCCCCEEECCCBTTBCEEEEEECCSCCCSCCCCSSCGGGEEEEEEEECCCCCTTCEEEEEEEEECTTSSE
T ss_pred ccccccccccccccccccccccccCcchhhhhhhhccccccccccccceEEEEEEEEeeccCCCCEEEECCCCcCCCCCc
Confidence 00 000000 00100 0 0 0224556899999999986 7999999
Q ss_pred eeecCCCCChh-hHHHHHHHHHHHHHHhcccccccccCCCCCCCCCCCHHHHHHHHHcccccccccccceecc------c
Q 009873 397 SIKFNYLAKEK-DLHECVKMVQLLDKVTKSQSVSSFLGIKPQEKLMSNSDELRKLCKNNVRTFYHYHGGCIVG------S 469 (523)
Q Consensus 397 ~i~~~~~~~~~-D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG------~ 469 (523)
.++++|..++. |++.+.++.+.+.++++.++........ . ....++++|++|||+|| +
T Consensus 499 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~~----------~-----~~~~~~~~H~~gt~~mg~~~~~~~ 563 (623)
T 3pl8_A 499 QPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGSLP----------Q-----FMEPGLVLHLGGTHRMGFDEKEDN 563 (623)
T ss_dssp EEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTSCS----------E-----ECCTTTTCCCBCTTCBCSSTTTTT
T ss_pred eEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCchh----------h-----ccCCCCcccCCCceeCCCCCCCCe
Confidence 99999999999 9999999999999999988764321100 0 01246789999999999 5
Q ss_pred cc-CCCCcEeccCCcEEeeccccCCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 009873 470 VV-DKDYRVYGVKGLRVIDGSTFQESPGTNPMATVMMLGRYQGVKLVEER 518 (523)
Q Consensus 470 Vv-D~~~rv~g~~nL~V~D~Sv~P~~~~~nPtlTi~Ala~r~a~~i~~~~ 518 (523)
|| |++|||||++||||+|+|+||+++++||++|+||||+|+|++|+++.
T Consensus 564 vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~ 613 (623)
T 3pl8_A 564 CCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNF 613 (623)
T ss_dssp CSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHC
T ss_pred eEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 87 99999999999999999999999999999999999999999998764
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.64 E-value=8.4e-16 Score=161.96 Aligned_cols=194 Identities=19% Similarity=0.209 Sum_probs=110.2
Q ss_pred ccCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCCCCCccccchhccccCCCCCCccccccCcCCCceeecCc
Q 009873 49 VAGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFGNPLVTDKRFFGFSLLQTDEYTSVAQSFISTDGVQNHRG 127 (523)
Q Consensus 49 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 127 (523)
.++.+|||||||||++|+++|++|++ |++|+||||++
T Consensus 37 ~~~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~------------------------------------------ 74 (510)
T 4at0_A 37 EWDYEADVVVAGYGIAGVAASIEAARAGADVLVLERTS------------------------------------------ 74 (510)
T ss_dssp CCSEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS------------------------------------------
T ss_pred ccCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC------------------------------------------
Confidence 34678999999999999999999999 99999999997
Q ss_pred eecccccccCCccccCC-ChhhHhhCC--CCHHHHHHHhHhhhccccCCCC----CChhHHHHHHHHHHcCCCCCCCC--
Q 009873 128 RVLGGSSAINGGFYSRA-REDFVKKAG--WDEELVKKAYEWVESKVVFPPE----LTPWQSVVEFGLLEAGILPYNGY-- 198 (523)
Q Consensus 128 ~~lGG~s~~~~~~~~r~-~~~~~~~~~--w~~~~~~~~~~~~~~~~~~~p~----~~~~~~~~~~~~~~~g~~~~~~~-- 198 (523)
.+||+|.++++.++.+ ....+...+ .+.+.+..++.+...... .+. +........+++.+.|+......
T Consensus 75 -~~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~ 152 (510)
T 4at0_A 75 -GWGGATALAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAALGPGA-DEEKITDYCEGSVEHYNWLVDCGVPFKESFWG 152 (510)
T ss_dssp -SSCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHHSCSSC-CHHHHHHHHHTHHHHHHHHHHTTCCCCSCEEC
T ss_pred -CCCCcchhcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHhhHHHHHHHHHcCCeecccccC
Confidence 4577777777765543 222222222 222333333222111100 000 00112334566677776321110
Q ss_pred ----CcCCCCcc------------------eeeeeEEc---CCCeee---chHh-hhhhCCCCCeEEEeccEEEEEEEcC
Q 009873 199 ----SLEHIEGT------------------KIGGTAFD---QCGKRH---TSAD-LLEAGNPKNLVVLLNATVNNIIFSN 249 (523)
Q Consensus 199 ----~~~~~~~~------------------~~~~~~~~---~~g~~~---~~~~-~l~~~~~~g~~i~~~~~V~~l~~~~ 249 (523)
......+. ..+..... ..+... .... ++..+++.|++|+++++|++|+.++
T Consensus 153 ~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~~~~~~~~g~~~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~ 232 (510)
T 4at0_A 153 EPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVPQMDGKRTGEKGGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDD 232 (510)
T ss_dssp SSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEECCCCSSCBTTTBCTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECT
T ss_pred CcccccCCcccccccCcccccccccccCcccceeeecccccccccCCCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECC
Confidence 00000000 00000000 011111 1112 2335566799999999999999984
Q ss_pred CCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchh-HHHH
Q 009873 250 NGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGS-PQLL 303 (523)
Q Consensus 250 ~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~t-p~lL 303 (523)
++ +|+||++.+ +++ .+++.+ +|.||||+|++.. +.++
T Consensus 233 ~g-----~v~GV~~~~-~g~---~~~i~A--------~k~VVlAtGG~~~n~~m~ 270 (510)
T 4at0_A 233 TG-----RVVGIVAKQ-YGK---EVAVRA--------RRGVVLATGSFAYNDKMI 270 (510)
T ss_dssp TC-----CEEEEEEEE-TTE---EEEEEE--------EEEEEECCCCCTTCHHHH
T ss_pred CC-----cEEEEEEEE-CCc---EEEEEe--------CCeEEEeCCChhhCHHHH
Confidence 43 899999987 455 567876 3499999999984 4444
No 13
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.54 E-value=1.7e-14 Score=153.90 Aligned_cols=190 Identities=18% Similarity=0.188 Sum_probs=109.7
Q ss_pred cCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCCCCCccccchhccccCCCCCCccccccCcCCCceeecCce
Q 009873 50 AGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFGNPLVTDKRFFGFSLLQTDEYTSVAQSFISTDGVQNHRGR 128 (523)
Q Consensus 50 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 128 (523)
...++||||||||++|+++|+.|++ |++|+||||++
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~------------------------------------------- 154 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAP------------------------------------------- 154 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS-------------------------------------------
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-------------------------------------------
Confidence 4578999999999999999999999 99999999997
Q ss_pred ecccccccCCccccCCChhhHhhCCCCHHHHHHHhHhhhccccCC--CC----CChhHHHHHHHHHHcCCCCCCCCCcCC
Q 009873 129 VLGGSSAINGGFYSRAREDFVKKAGWDEELVKKAYEWVESKVVFP--PE----LTPWQSVVEFGLLEAGILPYNGYSLEH 202 (523)
Q Consensus 129 ~lGG~s~~~~~~~~r~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~--p~----~~~~~~~~~~~~~~~g~~~~~~~~~~~ 202 (523)
.+||.|..+++.........+...+.. +..+.+++...+..... +. +........+++.+.|++ +.... .
T Consensus 155 ~~gg~s~~s~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~-~~~~~--~ 230 (566)
T 1qo8_A 155 FSGGNSMISAGGMNAVGTKQQTAHGVE-DKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGAN-LDDLK--R 230 (566)
T ss_dssp SSCTTGGGCCSCEECSSCHHHHHTTCC-CCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCC-CCEEE--C
T ss_pred CCCCcccccCceeEccCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHhccHHHHHHHHhcCCc-ccccc--c
Confidence 346666666555443333333222211 11122222221110000 00 001123345667777763 21100 0
Q ss_pred CCcceeeeeEEcCCCe--eechHhhh-hhCCCCCeEEEeccEEEEEEEcC-CCCCCCceeeEEEEEecCCCCCceeEEEe
Q 009873 203 IEGTKIGGTAFDQCGK--RHTSADLL-EAGNPKNLVVLLNATVNNIIFSN-NGKANESRAHGIRFIKSDGSSNHMHEAYL 278 (523)
Q Consensus 203 ~~~~~~~~~~~~~~g~--~~~~~~~l-~~~~~~g~~i~~~~~V~~l~~~~-~g~~~~~~v~GV~~~~~~g~~~~~~~i~a 278 (523)
..+...........+. .......| ..+++.|++|+++++|++|+.++ + +|+||++.+.+|+ ..++.+
T Consensus 231 ~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g------~v~Gv~~~~~~g~---~~~i~A 301 (566)
T 1qo8_A 231 SGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDH------SVVGAVVHGKHTG---YYMIGA 301 (566)
T ss_dssp CTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTS------BEEEEEEEETTTE---EEEEEE
T ss_pred cCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCC------cEEEEEEEeCCCc---EEEEEc
Confidence 0111111111111111 01111223 35556799999999999999987 5 8999999875676 667887
Q ss_pred cCCCCCCCCCcEEEecCCchhHHHHH
Q 009873 279 NKPGNSSTWGDVILSAGALGSPQLLL 304 (523)
Q Consensus 279 ~~~~~~~~~~~VILaaGa~~tp~lLl 304 (523)
+.||||+|++...+-|+
T Consensus 302 ---------~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 302 ---------KSVVLATGGYGMNKEMI 318 (566)
T ss_dssp ---------EEEEECCCCCTTCHHHH
T ss_pred ---------CEEEEecCCcccCHHHH
Confidence 99999999998654444
No 14
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.52 E-value=3.5e-14 Score=151.70 Aligned_cols=191 Identities=18% Similarity=0.203 Sum_probs=107.4
Q ss_pred cCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCCCCCccccchhccccCCCCCCccccccCcCCCceeecCce
Q 009873 50 AGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFGNPLVTDKRFFGFSLLQTDEYTSVAQSFISTDGVQNHRGR 128 (523)
Q Consensus 50 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 128 (523)
...++||||||||++|+++|+.|++ |++|+||||.+
T Consensus 123 ~~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~------------------------------------------- 159 (571)
T 1y0p_A 123 PHDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEP------------------------------------------- 159 (571)
T ss_dssp CSEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS-------------------------------------------
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-------------------------------------------
Confidence 3457999999999999999999999 99999999997
Q ss_pred ecccccccCCccccCCChhhHhhCCCCHHHHHHHhHhhhccccC--CCC----CChhHHHHHHHHHHcCCCCCCCCCcCC
Q 009873 129 VLGGSSAINGGFYSRAREDFVKKAGWDEELVKKAYEWVESKVVF--PPE----LTPWQSVVEFGLLEAGILPYNGYSLEH 202 (523)
Q Consensus 129 ~lGG~s~~~~~~~~r~~~~~~~~~~w~~~~~~~~~~~~~~~~~~--~p~----~~~~~~~~~~~~~~~g~~~~~~~~~~~ 202 (523)
.+||.|.+.++.........+...+.. +..+.++....+.-.. .+. +........+++.+.|++ +... ..
T Consensus 160 ~~gg~s~~a~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-~~~~--~~ 235 (571)
T 1y0p_A 160 VIGGNAKLAAGGMNAAWTDQQKAKKIT-DSPELMFEDTMKGGQNINDPALVKVLSSHSKDSVDWMTAMGAD-LTDV--GM 235 (571)
T ss_dssp SSCTTGGGCCSCEECSSCHHHHHTTCC-CCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCC-CCEE--EC
T ss_pred CCCCchhhcCceEEeCCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHHccHHHHHHHHhcCCC-CccC--cc
Confidence 345555555544433322222222211 1111222211110000 000 001122345666677763 2110 00
Q ss_pred CCcceeeeeEEcCCCeee--chHhhh-hhCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEec
Q 009873 203 IEGTKIGGTAFDQCGKRH--TSADLL-EAGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLN 279 (523)
Q Consensus 203 ~~~~~~~~~~~~~~g~~~--~~~~~l-~~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~ 279 (523)
..+...........|... .....| ..+++.|++|+++++|++|+.++++ +|+||++.+.+|+ ..++.+
T Consensus 236 ~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g-----~v~Gv~~~~~~g~---~~~i~a- 306 (571)
T 1y0p_A 236 MGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKG-----TVKGILVKGMYKG---YYWVKA- 306 (571)
T ss_dssp CTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTS-----CEEEEEEEETTTE---EEEEEC-
T ss_pred cCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCC-----eEEEEEEEeCCCc---EEEEEC-
Confidence 011111111111111111 111223 3556679999999999999997733 8999999875676 667886
Q ss_pred CCCCCCCCCcEEEecCCchhHHHHH
Q 009873 280 KPGNSSTWGDVILSAGALGSPQLLL 304 (523)
Q Consensus 280 ~~~~~~~~~~VILaaGa~~tp~lLl 304 (523)
+.||||+|++...+-|+
T Consensus 307 --------~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 307 --------DAVILATGGFAKNNERV 323 (571)
T ss_dssp --------SEEEECCCCCTTCHHHH
T ss_pred --------CeEEEeCCCcccCHHHH
Confidence 89999999997644433
No 15
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.45 E-value=3.7e-13 Score=143.88 Aligned_cols=55 Identities=13% Similarity=0.294 Sum_probs=46.8
Q ss_pred hhCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEe-cCCCCCceeEEEecCCCCCCCCCcEEEecCCchh
Q 009873 227 EAGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIK-SDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGS 299 (523)
Q Consensus 227 ~~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~-~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~t 299 (523)
..+.+.|++|++++.|++|+.+++ +|.||.+.+ .+|+ .+.+.+ +.||||+|+++.
T Consensus 163 ~~~~~~gv~i~~~~~v~~Li~~~g------~v~Gv~~~~~~~G~---~~~i~A---------~~VVlATGG~~~ 218 (621)
T 2h88_A 163 GRSLRYDTSYFVEYFALDLLMENG------ECRGVIALCIEDGT---IHRFRA---------KNTVIATGGYGR 218 (621)
T ss_dssp HHHTTSCCEEEETEEEEEEEEETT------EEEEEEEEETTTCC---EEEEEE---------EEEEECCCCCGG
T ss_pred HHHHhCCCEEEEceEEEEEEEECC------EEEEEEEEEcCCCc---EEEEEc---------CeEEECCCcccc
Confidence 355678999999999999999765 999999876 4577 677887 999999999875
No 16
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.41 E-value=8.9e-13 Score=141.94 Aligned_cols=54 Identities=9% Similarity=0.138 Sum_probs=45.4
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEe-cCCCCCceeEEEecCCCCCCCCCcEEEecCCchh
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIK-SDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGS 299 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~-~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~t 299 (523)
.+.+.|++|++++.|++|+.+++ +|.||.+.+ .+|+ .+.+.+ +.||||+|+++.
T Consensus 167 ~a~~~gv~i~~~~~v~~L~~~~g------~v~Gv~~~~~~~G~---~~~i~A---------~~VVlATGG~~~ 221 (660)
T 2bs2_A 167 ECLKLGVSIQDRKEAIALIHQDG------KCYGAVVRDLVTGD---IIAYVA---------KGTLIATGGYGR 221 (660)
T ss_dssp HHHHHTCEEECSEEEEEEEEETT------EEEEEEEEETTTCC---EEEEEC---------SEEEECCCCCGG
T ss_pred HHHhCCCEEEECcEEEEEEecCC------EEEEEEEEECCCCc---EEEEEc---------CEEEEccCcchh
Confidence 45567999999999999998765 999999876 4576 667886 999999999874
No 17
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.40 E-value=6.9e-13 Score=141.44 Aligned_cols=59 Identities=14% Similarity=0.180 Sum_probs=47.3
Q ss_pred hhCCCCCeEEEeccEEEEEEEcC-CCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchh-HHHH
Q 009873 227 EAGNPKNLVVLLNATVNNIIFSN-NGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGS-PQLL 303 (523)
Q Consensus 227 ~~~~~~g~~i~~~~~V~~l~~~~-~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~t-p~lL 303 (523)
..+++.|++|+++++|++|+.++ + +|+||++.+.+|+ ..++.+ +.||||+|++.. +.++
T Consensus 263 ~~~~~~gv~i~~~t~v~~l~~~~~g------~v~GV~~~~~~G~---~~~i~A---------~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 263 DNAVKRGTDIRLNSRVVRILEDASG------KVTGVLVKGEYTG---YYVIKA---------DAVVIAAGGFAKNNERV 323 (572)
T ss_dssp HHHHHTTCEEESSEEEEEEEEC--C------CEEEEEEEETTTE---EEEEEC---------SEEEECCCCCTTCHHHH
T ss_pred HHHHHcCCeEEecCEEEEEEECCCC------eEEEEEEEeCCCc---EEEEEc---------CEEEEeCCCCccCHHHH
Confidence 35556799999999999999877 5 8999999875676 667886 999999999975 4444
No 18
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.38 E-value=1.1e-12 Score=140.08 Aligned_cols=56 Identities=11% Similarity=0.170 Sum_probs=45.4
Q ss_pred hhCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEe-cCCCCCceeEEEecCCCCCCCCCcEEEecCCchh
Q 009873 227 EAGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIK-SDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGS 299 (523)
Q Consensus 227 ~~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~-~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~t 299 (523)
..+.+.|++|++++.|++|+.++++ ++.||.+.+ .+|+ .+++.+ +.||||+|+++.
T Consensus 151 ~~~~~~gv~i~~~~~v~~L~~~~~g-----~v~Gv~~~~~~~g~---~~~i~A---------~~VVlAtGg~~~ 207 (588)
T 2wdq_A 151 QQNLKNHTTIFSEWYALDLVKNQDG-----AVVGCTALCIETGE---VVYFKA---------RATVLATGGAGR 207 (588)
T ss_dssp HHHHHTTCEEEETEEEEEEEECTTS-----CEEEEEEEETTTCC---EEEEEE---------EEEEECCCCCGG
T ss_pred HHHHhCCCEEEeCcEEEEEEECCCC-----EEEEEEEEEcCCCe---EEEEEc---------CEEEECCCCCcc
Confidence 3445679999999999999997332 899999876 4576 677887 999999999865
No 19
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.35 E-value=2.7e-12 Score=134.92 Aligned_cols=57 Identities=19% Similarity=0.149 Sum_probs=40.2
Q ss_pred hhCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHh
Q 009873 227 EAGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLL 305 (523)
Q Consensus 227 ~~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~ 305 (523)
+.+++.|++|++++.|++|+.+++ +++||++.+ |+ ++.+ +.||.+++...+.+.|+-
T Consensus 229 ~~~~~~Gg~I~~~~~V~~I~~~~~------~~~gV~~~~--g~-----~~~a---------d~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 229 KLFQDLGGEVVLNARVSHMETTGN------KIEAVHLED--GR-----RFLT---------QAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETT------EEEEEEETT--SC-----EEEC---------SCEEECCC----------
T ss_pred HHHHHhCCceeeecceeEEEeeCC------eEEEEEecC--Cc-----EEEc---------CEEEECCCHHHHHHHhcc
Confidence 356788999999999999999988 999998754 66 4666 999999999888776664
No 20
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.34 E-value=2.5e-12 Score=135.93 Aligned_cols=35 Identities=31% Similarity=0.642 Sum_probs=33.0
Q ss_pred CCcccEEEECCCCchHHHHhhhhccCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSDNFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Laeg~~VlvlE~G~ 85 (523)
+.+|||||||||++|+++|++|++|++|+||||+.
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~G~~V~vlEk~~ 40 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGP 40 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTTTSCEEEECSSC
T ss_pred CCCCCEEEECccHHHHHHHHHHhcCCcEEEEECCC
Confidence 45799999999999999999999999999999997
No 21
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.30 E-value=4.1e-11 Score=128.10 Aligned_cols=56 Identities=13% Similarity=0.255 Sum_probs=45.1
Q ss_pred hhCCCCC-eEEEeccEEEEEEEcCCCCCCCceeeEEEEEe-cCCCCCceeEEEecCCCCCCCCCcEEEecCCchhH
Q 009873 227 EAGNPKN-LVVLLNATVNNIIFSNNGKANESRAHGIRFIK-SDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSP 300 (523)
Q Consensus 227 ~~~~~~g-~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~-~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp 300 (523)
..+.+.+ ++|++++.|++|+.+++ +|.||.+.+ .+|+ .+++.+ +.||||+|+++..
T Consensus 142 ~~~~~~gnv~i~~~~~v~~l~~~~g------~v~Gv~~~~~~~G~---~~~i~A---------~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 142 QTSLQFPQIQRFDEHFVLDILVDDG------HVRGLVAMNMMEGT---LVQIRA---------NAVVMATGGAGRV 199 (602)
T ss_dssp HHHTTCTTEEEEETEEEEEEEEETT------EEEEEEEEETTTTE---EEEEEC---------SCEEECCCCCGGG
T ss_pred HHHHhCCCcEEEeCCEEEEEEEeCC------EEEEEEEEEcCCCc---EEEEEc---------CeEEECCCCCccc
Confidence 3445555 99999999999999876 899998876 4566 567886 8999999998654
No 22
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.28 E-value=1.1e-11 Score=128.29 Aligned_cols=35 Identities=34% Similarity=0.655 Sum_probs=32.2
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..+|||||||||++|+++|+.|++ |.+|+||||.+
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~ 59 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGN 59 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 356999999999999999999999 99999999986
No 23
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.26 E-value=1.6e-11 Score=130.48 Aligned_cols=63 Identities=17% Similarity=0.221 Sum_probs=51.8
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEec-CCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhh
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKS-DGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLS 306 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~-~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~S 306 (523)
.+.+.|++|+++++|++|..+++ ++.||++.+. .|+ ...+.+ +.||+|+|++ +..++...
T Consensus 179 ~a~~~G~~i~~~~~V~~l~~~~g------~v~gV~~~d~~tg~---~~~i~A---------~~VV~AaG~~-s~~l~~~~ 239 (561)
T 3da1_A 179 EAVARGAVALNYMKVESFIYDQG------KVVGVVAKDRLTDT---THTIYA---------KKVVNAAGPW-VDTLREKD 239 (561)
T ss_dssp HHHHTTCEEEESEEEEEEEEETT------EEEEEEEEETTTCC---EEEEEE---------EEEEECCGGG-HHHHHHTT
T ss_pred HHHHcCCEEEcCCEEEEEEEcCC------eEEEEEEEEcCCCc---eEEEEC---------CEEEECCCcc-hHHHHHhc
Confidence 55678999999999999999877 8999999873 355 567887 9999999985 78887776
Q ss_pred CCC
Q 009873 307 GIG 309 (523)
Q Consensus 307 Gig 309 (523)
|+.
T Consensus 240 g~~ 242 (561)
T 3da1_A 240 RSK 242 (561)
T ss_dssp TCC
T ss_pred CCC
Confidence 654
No 24
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.25 E-value=9.5e-12 Score=124.96 Aligned_cols=61 Identities=13% Similarity=0.106 Sum_probs=47.0
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhh-
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLS- 306 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~S- 306 (523)
.+++.|++|+++++|++|..+++ .+..|.. .+|+ ..++.+ +.||+|+|++ |+.|+...
T Consensus 159 ~~~~~Gv~i~~~~~v~~i~~~~~------~~~~v~~--~~g~---~~~~~a---------~~VV~A~G~~-s~~l~~~~~ 217 (369)
T 3dme_A 159 DAESDGAQLVFHTPLIAGRVRPE------GGFELDF--GGAE---PMTLSC---------RVLINAAGLH-APGLARRIE 217 (369)
T ss_dssp HHHHTTCEEECSCCEEEEEECTT------SSEEEEE--CTTS---CEEEEE---------EEEEECCGGG-HHHHHHTEE
T ss_pred HHHHCCCEEECCCEEEEEEEcCC------ceEEEEE--CCCc---eeEEEe---------CEEEECCCcc-hHHHHHHhc
Confidence 56678999999999999998876 3334544 3465 566887 9999999985 88888777
Q ss_pred CCC
Q 009873 307 GIG 309 (523)
Q Consensus 307 Gig 309 (523)
|+.
T Consensus 218 g~~ 220 (369)
T 3dme_A 218 GIP 220 (369)
T ss_dssp TSC
T ss_pred CCC
Confidence 764
No 25
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.24 E-value=1.3e-11 Score=132.80 Aligned_cols=52 Identities=10% Similarity=0.144 Sum_probs=42.6
Q ss_pred CeEEEeccEEEEEEEcCCCCCCCceeeEEEEEe-cCCCCCceeEEEecCCCCCCCCCcEEEecCCchh
Q 009873 233 NLVVLLNATVNNIIFSNNGKANESRAHGIRFIK-SDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGS 299 (523)
Q Consensus 233 g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~-~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~t 299 (523)
|++|++++.|++|+.++++.+ +|.||.+.+ .+|+ .+.+.+ +.||||+|+++.
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g---~v~Gv~~~~~~~g~---~~~i~A---------k~VVLATGG~g~ 234 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPN---RIAGAVGFNLRANE---VHIFKA---------NAMVVACGGAVN 234 (662)
T ss_dssp TTTEECSEEECCCEECSSSTT---BEEEEEEEESSSSC---EEEEEC---------SEEEECCCCBCS
T ss_pred CcEEEEceEEEEEEEeCCccc---eEEEEEEEEcCCCc---EEEEEe---------CEEEECCCcccc
Confidence 999999999999999865111 899998876 3466 677886 999999999873
No 26
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.23 E-value=2.9e-11 Score=122.12 Aligned_cols=36 Identities=31% Similarity=0.449 Sum_probs=33.1
Q ss_pred cCCcccEEEECCCCchHHHHhhhhccCeeEEEecCC
Q 009873 50 AGKSFDYIVVGGGTTGCPLAATLSDNFSVLLVERGG 85 (523)
Q Consensus 50 ~~~~~DvIIVGsG~aG~~~A~~Laeg~~VlvlE~G~ 85 (523)
...++||||||||++|+++|++|++|++|+||||++
T Consensus 6 ~~~~~dv~IIGaGi~Gls~A~~La~G~~V~vlE~~~ 41 (381)
T 3nyc_A 6 HPIEADYLVIGAGIAGASTGYWLSAHGRVVVLEREA 41 (381)
T ss_dssp EEEECSEEEECCSHHHHHHHHHHTTTSCEEEECSSS
T ss_pred CCCcCCEEEECCcHHHHHHHHHHhCCCCEEEEECCC
Confidence 345789999999999999999999999999999985
No 27
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.22 E-value=1.3e-10 Score=123.72 Aligned_cols=63 Identities=10% Similarity=0.100 Sum_probs=50.2
Q ss_pred hhCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEec-CCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHh
Q 009873 227 EAGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKS-DGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLL 305 (523)
Q Consensus 227 ~~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~-~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~ 305 (523)
..+.+.|++|+++++|++|..+++ ++.||++.+. .|+ ..++.+ +.||+|||++ +..++..
T Consensus 196 ~~a~~~Ga~i~~~t~V~~l~~~~~------~v~gV~~~d~~tg~---~~~i~A---------~~VV~AaG~w-s~~l~~~ 256 (571)
T 2rgh_A 196 KKAAEDGAYLVSKMKAVGFLYEGD------QIVGVKARDLLTDE---VIEIKA---------KLVINTSGPW-VDKVRNL 256 (571)
T ss_dssp HHHHHTTCEEESSEEEEEEEEETT------EEEEEEEEETTTCC---EEEEEB---------SCEEECCGGG-HHHHHTT
T ss_pred HHHHHcCCeEEeccEEEEEEEeCC------EEEEEEEEEcCCCC---EEEEEc---------CEEEECCChh-HHHHHHh
Confidence 355678999999999999999876 8999998864 354 457887 9999999986 7777655
Q ss_pred hCC
Q 009873 306 SGI 308 (523)
Q Consensus 306 SGi 308 (523)
.|+
T Consensus 257 ~g~ 259 (571)
T 2rgh_A 257 NFT 259 (571)
T ss_dssp CCS
T ss_pred hcc
Confidence 443
No 28
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.17 E-value=4.6e-11 Score=120.82 Aligned_cols=35 Identities=26% Similarity=0.459 Sum_probs=32.7
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..++||||||||++|+++|++|++ |++|+||||+.
T Consensus 3 ~~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 3 PEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 457999999999999999999999 99999999985
No 29
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.17 E-value=9e-11 Score=126.62 Aligned_cols=57 Identities=14% Similarity=0.067 Sum_probs=44.0
Q ss_pred hCCCC-Ce-EEEeccEEEEEEEcCCCCCCCceeeEEEEEe-cCCCCCceeEEEecCCCCCCCCCcEEEecCCchh
Q 009873 228 AGNPK-NL-VVLLNATVNNIIFSNNGKANESRAHGIRFIK-SDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGS 299 (523)
Q Consensus 228 ~~~~~-g~-~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~-~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~t 299 (523)
.+++. |+ +|++++.|++|+.++++.+ +|+||.+.+ .+|+ .+.+.+ +.||||+|+++.
T Consensus 160 ~~~~~~gv~~i~~~~~v~~L~~~~~~~g---~v~Gv~~~~~~~g~---~~~i~A---------~~VVlAtGG~~~ 219 (643)
T 1jnr_A 160 AAKMAVGEENIYERVFIFELLKDNNDPN---AVAGAVGFSVREPK---FYVFKA---------KAVILATGGATL 219 (643)
T ss_dssp HHHHHHCGGGEECSEEEEEEEECTTCTT---BEEEEEEEESSSSC---EEEEEC---------SEEEECCCCBCS
T ss_pred HHHhcCCCcEEEecCEEEEEEEcCCccc---eeEEEEEEEecCCc---EEEEEc---------CEEEECCCcccc
Confidence 34444 89 9999999999998764111 899998865 4566 667876 999999999875
No 30
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.13 E-value=4.9e-10 Score=117.58 Aligned_cols=57 Identities=12% Similarity=-0.027 Sum_probs=45.2
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEe-cCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHH
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIK-SDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLL 304 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~-~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl 304 (523)
.+.+.|++|+++++|++|..++ ++.+|++.+ .+|+ ..++.+ +.||+|+|++ +..++.
T Consensus 158 ~a~~~Gv~i~~~~~V~~l~~~~-------~~~~V~~~d~~~G~---~~~i~A---------~~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 158 MVVRKGGEVLTRTRATSARREN-------GLWIVEAEDIDTGK---KYSWQA---------RGLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHHHTTCEEECSEEEEEEEEET-------TEEEEEEEETTTCC---EEEEEE---------SCEEECCGGG-HHHHHH
T ss_pred HHHHcCCEEEcCcEEEEEEEeC-------CEEEEEEEECCCCC---EEEEEC---------CEEEECCChh-HHHHHH
Confidence 5567799999999999999865 477888875 3466 567887 9999999986 666654
No 31
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.12 E-value=8.1e-10 Score=112.45 Aligned_cols=57 Identities=21% Similarity=0.354 Sum_probs=44.4
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG 307 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG 307 (523)
.+++.|++++++++|++|..+++ ++.+|++. +|. +.+ +.||+|+|+. ++.++...|
T Consensus 183 ~~~~~g~~i~~~~~v~~i~~~~~------~~~~v~~~--~g~------~~a---------~~vV~a~G~~-s~~l~~~~g 238 (405)
T 2gag_B 183 KANEMGVDIIQNCEVTGFIKDGE------KVTGVKTT--RGT------IHA---------GKVALAGAGH-SSVLAEMAG 238 (405)
T ss_dssp HHHHTTCEEECSCCEEEEEESSS------BEEEEEET--TCC------EEE---------EEEEECCGGG-HHHHHHHHT
T ss_pred HHHHCCCEEEcCCeEEEEEEeCC------EEEEEEeC--Cce------EEC---------CEEEECCchh-HHHHHHHcC
Confidence 55668999999999999998766 77787653 344 777 9999999985 667766666
Q ss_pred C
Q 009873 308 I 308 (523)
Q Consensus 308 i 308 (523)
+
T Consensus 239 ~ 239 (405)
T 2gag_B 239 F 239 (405)
T ss_dssp C
T ss_pred C
Confidence 5
No 32
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.11 E-value=5.7e-11 Score=121.32 Aligned_cols=37 Identities=19% Similarity=0.396 Sum_probs=31.2
Q ss_pred ccCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 49 VAGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 49 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++..+|||||||||++|+++|+.|++ |++|+|||+++
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~ 60 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHAR 60 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 45668999999999999999999999 99999999987
No 33
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.10 E-value=5.3e-10 Score=113.67 Aligned_cols=34 Identities=38% Similarity=0.660 Sum_probs=32.2
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++||||||||++|+++|+.|++ |++|+||||+.
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 46899999999999999999999 99999999986
No 34
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.08 E-value=3.9e-10 Score=122.79 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..+||||||||++|+++|++|++ |++|+||||..
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 45999999999999999999999 99999999975
No 35
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.04 E-value=2.3e-10 Score=118.05 Aligned_cols=37 Identities=30% Similarity=0.450 Sum_probs=33.6
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cC-eeEEEecCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NF-SVLLVERGGSP 87 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~~~ 87 (523)
..+|||||||||++|+++|++|++ |+ +|+||||+...
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVP 42 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 457999999999999999999999 89 99999998743
No 36
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.03 E-value=2.2e-10 Score=119.06 Aligned_cols=30 Identities=20% Similarity=0.365 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
||||||||++|+++|++|++ |++|+||||+
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 89999999999999999998 9999999998
No 37
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.03 E-value=3.1e-10 Score=123.73 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=32.6
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..++||||||||++|+++|++|++ |++|+||||+.
T Consensus 262 ~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 262 TRCDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp SCCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 456999999999999999999999 99999999985
No 38
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.02 E-value=1.6e-09 Score=104.90 Aligned_cols=34 Identities=32% Similarity=0.503 Sum_probs=31.8
Q ss_pred CcccEEEECCCCchHHHHhhhhc--cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD--NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvlE~G~ 85 (523)
.+|||||||+|++|+++|+.|++ |.+|+||||..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~ 73 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 73 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 56899999999999999999997 79999999986
No 39
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.01 E-value=5.4e-10 Score=115.55 Aligned_cols=33 Identities=45% Similarity=0.659 Sum_probs=31.2
Q ss_pred CcccEEEECCCCchHHHHhhhhc-c-CeeEEEecC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-N-FSVLLVERG 84 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G 84 (523)
.++||||||||++|+++|++|++ | .+|+||||.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 57999999999999999999999 8 999999993
No 40
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.01 E-value=7.8e-10 Score=123.18 Aligned_cols=57 Identities=21% Similarity=0.218 Sum_probs=44.6
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG 307 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG 307 (523)
.+++.|++|+++++|++|..+++ ++.+|++. +| ++.+ +.||+|+|++ ++.++...|
T Consensus 160 ~a~~~Gv~i~~~t~V~~i~~~~~------~v~~V~t~--~G------~i~A---------d~VV~AaG~~-s~~l~~~~g 215 (830)
T 1pj5_A 160 RTESAGVTYRGSTTVTGIEQSGG------RVTGVQTA--DG------VIPA---------DIVVSCAGFW-GAKIGAMIG 215 (830)
T ss_dssp HHHHTTCEEECSCCEEEEEEETT------EEEEEEET--TE------EEEC---------SEEEECCGGG-HHHHHHTTT
T ss_pred HHHHcCCEEECCceEEEEEEeCC------EEEEEEEC--Cc------EEEC---------CEEEECCccc-hHHHHHHhC
Confidence 55678999999999999998776 78887652 23 3776 9999999986 677766665
Q ss_pred C
Q 009873 308 I 308 (523)
Q Consensus 308 i 308 (523)
+
T Consensus 216 ~ 216 (830)
T 1pj5_A 216 M 216 (830)
T ss_dssp C
T ss_pred C
Confidence 4
No 41
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.99 E-value=3.1e-10 Score=114.63 Aligned_cols=37 Identities=30% Similarity=0.555 Sum_probs=33.6
Q ss_pred ccCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 49 VAGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 49 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..+.+|||||||||++|+++|++|++ |++|+|||++.
T Consensus 13 ~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 13 AMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp -CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 34567999999999999999999999 99999999985
No 42
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.97 E-value=2.5e-09 Score=108.40 Aligned_cols=60 Identities=13% Similarity=0.174 Sum_probs=45.2
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG 307 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG 307 (523)
.+.+.|++|+.+++|++|..+++ +++||.+.+ .+. ..++.+ +.||.|+|... .+....|
T Consensus 111 ~~~~~gv~i~~~~~v~~i~~~~~------~v~gv~~~~-~~~---~~~~~a---------~~vV~A~G~~s--~~~~~~g 169 (397)
T 3cgv_A 111 LAAKAGADVWVKSPALGVIKENG------KVAGAKIRH-NNE---IVDVRA---------KMVIAADGFES--EFGRWAG 169 (397)
T ss_dssp HHHHHTCEEESSCCEEEEEEETT------EEEEEEEEE-TTE---EEEEEE---------EEEEECCCTTC--HHHHHHT
T ss_pred HHHhCCCEEEECCEEEEEEEeCC------EEEEEEEEE-CCe---EEEEEc---------CEEEECCCcch--HhHHhcC
Confidence 45567999999999999999876 899998876 233 456887 99999999754 3334344
Q ss_pred C
Q 009873 308 I 308 (523)
Q Consensus 308 i 308 (523)
+
T Consensus 170 ~ 170 (397)
T 3cgv_A 170 L 170 (397)
T ss_dssp C
T ss_pred C
Confidence 4
No 43
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.96 E-value=1.6e-09 Score=113.79 Aligned_cols=36 Identities=31% Similarity=0.421 Sum_probs=33.2
Q ss_pred cCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 50 AGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 50 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
...++||||||||++|+++|+.|++ |++|+||||+.
T Consensus 104 ~~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp TTCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccC
Confidence 3456899999999999999999999 99999999996
No 44
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.96 E-value=1.6e-09 Score=109.69 Aligned_cols=51 Identities=14% Similarity=0.157 Sum_probs=41.3
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCc
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGAL 297 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~ 297 (523)
.+.+.|++++++++|+.+..+++ ++++|.... +++ ..++.+ +.||-|.|.-
T Consensus 111 ~a~~~G~~~~~~~~v~~~~~~~~------~~~~v~~~~-~~~---~~~~~a---------~~vIgAdG~~ 161 (397)
T 3oz2_A 111 LAAKAGADVWVKSPALGVIKENG------KVAGAKIRH-NNE---IVDVRA---------KMVIAADGFE 161 (397)
T ss_dssp HHHHHTCEEESSCCEEEEEEETT------EEEEEEEEE-TTE---EEEEEE---------EEEEECCCTT
T ss_pred HHHhcCcEEeeeeeeeeeeeccc------eeeeeeecc-ccc---ceEEEE---------eEEEeCCccc
Confidence 55678999999999999999887 898888765 455 567887 8888888863
No 45
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.93 E-value=1.6e-09 Score=110.03 Aligned_cols=33 Identities=30% Similarity=0.442 Sum_probs=31.7
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+|||||||+|++|+++|+.|++ |.+|+||||++
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~ 37 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGK 37 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 6999999999999999999999 99999999986
No 46
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.93 E-value=3.7e-09 Score=103.75 Aligned_cols=35 Identities=31% Similarity=0.510 Sum_probs=32.3
Q ss_pred CCcccEEEECCCCchHHHHhhhhc---cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD---NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~ 85 (523)
..+|||||||+|++|+++|+.|++ |++|+|||++.
T Consensus 77 ~~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 77 HAETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp HHBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 357999999999999999999998 79999999986
No 47
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.91 E-value=4.3e-09 Score=106.47 Aligned_cols=33 Identities=36% Similarity=0.541 Sum_probs=31.7
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+|||||||||++|+++|++|++ |++|+|||++.
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 6899999999999999999999 99999999986
No 48
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.89 E-value=3.6e-09 Score=108.44 Aligned_cols=54 Identities=20% Similarity=0.147 Sum_probs=44.2
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHH
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLL 304 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl 304 (523)
.+++.|++|++++.|++|..+++ +++||.+ +|+ ++.+ +.||+|+++..+.+||-
T Consensus 205 ~~~~~G~~i~~~~~V~~i~~~~~------~~~gv~~---~g~-----~~~a---------d~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 205 VISANGGKIHTGQEVSKILIENG------KAAGIIA---DDR-----IHDA---------DLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHTTCEEECSCCEEEEEEETT------EEEEEEE---TTE-----EEEC---------SEEEECSCHHHHHHHTT
T ss_pred HHHHcCCEEEECCceeEEEEECC------EEEEEEE---CCE-----EEEC---------CEEEECCCHHHHHHhcC
Confidence 55678999999999999999876 8888875 244 3676 99999999988887654
No 49
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.89 E-value=1.4e-09 Score=114.38 Aligned_cols=52 Identities=21% Similarity=0.300 Sum_probs=44.9
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCc
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGAL 297 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~ 297 (523)
.+++.|++|+++++|++|..+++ ++.||.+.+.+|+ ..++.+ +.||.|+|..
T Consensus 120 ~a~~~Gv~i~~~~~V~~v~~~~~------~v~gv~~~~~dG~---~~~i~a---------d~VI~AdG~~ 171 (512)
T 3e1t_A 120 NSERKGVDVRERHEVIDVLFEGE------RAVGVRYRNTEGV---ELMAHA---------RFIVDASGNR 171 (512)
T ss_dssp HHHHTTCEEESSCEEEEEEEETT------EEEEEEEECSSSC---EEEEEE---------EEEEECCCTT
T ss_pred HHHhCCCEEEcCCEEEEEEEECC------EEEEEEEEeCCCC---EEEEEc---------CEEEECCCcc
Confidence 45568999999999999999876 8999999877786 677887 9999999975
No 50
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.89 E-value=5.7e-09 Score=108.02 Aligned_cols=53 Identities=13% Similarity=0.149 Sum_probs=43.3
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEec-CCCCCceeEEEecCCCCCCCCCcEEEecCCch
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKS-DGSSNHMHEAYLNKPGNSSTWGDVILSAGALG 298 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~-~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~ 298 (523)
.+.+.|++|+++++|+++..+++ +++||++.+. +|+ ..++.+ +.||.|+|+..
T Consensus 109 ~a~~~gv~i~~~~~v~~i~~~~~------~v~gv~~~~~~~G~---~~~~~a---------d~VV~AdG~~s 162 (453)
T 3atr_A 109 EAQDRGVEIWDLTTAMKPIFEDG------YVKGAVLFNRRTNE---ELTVYS---------KVVVEATGYSR 162 (453)
T ss_dssp HHHHTTCEEESSEEEEEEEEETT------EEEEEEEEETTTTE---EEEEEC---------SEEEECCGGGC
T ss_pred HHHHcCCEEEeCcEEEEEEEECC------EEEEEEEEEcCCCc---eEEEEc---------CEEEECcCCch
Confidence 44558999999999999998776 8999988764 565 567886 99999999753
No 51
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.87 E-value=3.5e-09 Score=106.49 Aligned_cols=34 Identities=21% Similarity=0.480 Sum_probs=32.0
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
+|||||||||++|+++|++|++ |++|+||||+..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 5899999999999999999999 999999999863
No 52
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.82 E-value=3.5e-09 Score=108.40 Aligned_cols=34 Identities=29% Similarity=0.554 Sum_probs=32.2
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+|||||||||++|+++|+.|++ |.+|+||||..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 46999999999999999999999 99999999986
No 53
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.74 E-value=1.1e-08 Score=108.82 Aligned_cols=51 Identities=14% Similarity=0.118 Sum_probs=41.5
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCc
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGAL 297 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~ 297 (523)
.+++.|++++++++|++|..+++ .+.+|.+.+ +|+ ..++.+ +.||.|+|..
T Consensus 137 ~a~~~Gv~i~~g~~V~~v~~~~g------~~~~V~~~~-~G~---~~~i~A---------dlVV~AdG~~ 187 (591)
T 3i3l_A 137 EARSRGITVHEETPVTDVDLSDP------DRVVLTVRR-GGE---SVTVES---------DFVIDAGGSG 187 (591)
T ss_dssp HHHHTTCEEETTCCEEEEECCST------TCEEEEEEE-TTE---EEEEEE---------SEEEECCGGG
T ss_pred HHHhCCCEEEeCCEEEEEEEcCC------CEEEEEEec-CCc---eEEEEc---------CEEEECCCCc
Confidence 55568999999999999998755 678888875 565 567887 9999999973
No 54
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.74 E-value=2.3e-08 Score=102.40 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=32.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFG 89 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~ 89 (523)
||||||||++|+++|++|++ |++|+||||.+...+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG 37 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGG 37 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 89999999999999999999 999999999875544
No 55
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.70 E-value=1.8e-08 Score=107.43 Aligned_cols=37 Identities=30% Similarity=0.518 Sum_probs=32.8
Q ss_pred cCCcccEEEECCCCchHHHHhhhhc-------cCeeEEEecCCC
Q 009873 50 AGKSFDYIVVGGGTTGCPLAATLSD-------NFSVLLVERGGS 86 (523)
Q Consensus 50 ~~~~~DvIIVGsG~aG~~~A~~Lae-------g~~VlvlE~G~~ 86 (523)
+..+|||||||||++|+++|++|++ |++|+||||++.
T Consensus 32 ~~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~ 75 (584)
T 2gmh_A 32 FAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 75 (584)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred cccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCC
Confidence 3456999999999999999999986 799999999963
No 56
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.70 E-value=4.3e-08 Score=95.63 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=32.2
Q ss_pred CCcccEEEECCCCchHHHHhhhhc---cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD---NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~ 85 (523)
..+|||+|||+|++|+++|+.|++ |++|+|+|+..
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 457899999999999999999987 69999999986
No 57
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.69 E-value=4.3e-08 Score=103.49 Aligned_cols=34 Identities=24% Similarity=0.422 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+|||||||||.+|+.+|+.|++ |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 47999999999999999999999 99999999984
No 58
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.66 E-value=5.6e-08 Score=103.02 Aligned_cols=35 Identities=29% Similarity=0.484 Sum_probs=32.5
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+.+|||||||||.+|+.+|+.|++ |.+|+|||++.
T Consensus 26 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 26 PDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp SSCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 357999999999999999999999 99999999974
No 59
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.66 E-value=1.4e-07 Score=99.67 Aligned_cols=35 Identities=37% Similarity=0.502 Sum_probs=32.8
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..++||||||||++|+++|+.|++ |.+|+||||.+
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~ 38 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRP 38 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 357999999999999999999999 99999999986
No 60
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.64 E-value=5e-08 Score=100.35 Aligned_cols=41 Identities=29% Similarity=0.533 Sum_probs=36.2
Q ss_pred ccCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCC
Q 009873 49 VAGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFG 89 (523)
Q Consensus 49 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~ 89 (523)
.+.++|||||||+|.+|+++|++|++ |++|+||||++..++
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGG 57 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCC
Confidence 34568999999999999999999999 999999999986554
No 61
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.63 E-value=1.7e-07 Score=98.01 Aligned_cols=38 Identities=32% Similarity=0.341 Sum_probs=34.1
Q ss_pred cccCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 48 EVAGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 48 ~~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..+++++||||||+|++|+++|+.|++ |.+|+||||.+
T Consensus 6 ~~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 44 (500)
T 2qa1_A 6 HHHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLV 44 (500)
T ss_dssp --CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred CCccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 345678999999999999999999999 99999999986
No 62
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.62 E-value=3.4e-08 Score=100.62 Aligned_cols=35 Identities=43% Similarity=0.701 Sum_probs=32.0
Q ss_pred CCcccEEEECCCCchHHHHhhhhc---cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD---NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~ 85 (523)
..++||||||||++|+++|+.|++ |++|+|||++.
T Consensus 34 ~~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 34 EEAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred cCcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 456999999999999999999986 69999999985
No 63
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.61 E-value=1.3e-07 Score=88.50 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=31.4
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+|||||||+|++|+.+|..|++ |.+|+|||++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 6899999999999999999999 99999999984
No 64
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.60 E-value=8.7e-08 Score=94.66 Aligned_cols=33 Identities=21% Similarity=0.414 Sum_probs=31.3
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++||||||||++|+++|+.|++ |.+|+||||.+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 4799999999999999999999 99999999986
No 65
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.59 E-value=3.2e-08 Score=98.27 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=29.9
Q ss_pred ccEEEECCCCchHHHHhhhhc----cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD----NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae----g~~VlvlE~G~ 85 (523)
+||+|||||++|+++|+.|++ |++|+|+||++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 599999999999999999987 58999999986
No 66
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.59 E-value=1.1e-07 Score=96.73 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=32.0
Q ss_pred ccccCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 47 KEVAGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 47 ~~~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+....+.|||||||||++|+++|+.|++ |.+|+||||.+
T Consensus 17 ~~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 17 NLYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3445667999999999999999999999 99999999986
No 67
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.55 E-value=4.2e-08 Score=102.57 Aligned_cols=36 Identities=33% Similarity=0.371 Sum_probs=33.2
Q ss_pred cCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 50 AGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 50 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
....+||||||||++|+++|..|++ |.+|+|||+.+
T Consensus 89 ~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~ 125 (497)
T 2bry_A 89 ACTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRI 125 (497)
T ss_dssp TTTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred ccCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEecc
Confidence 3457899999999999999999999 99999999986
No 68
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.55 E-value=1.1e-07 Score=100.71 Aligned_cols=37 Identities=30% Similarity=0.551 Sum_probs=32.2
Q ss_pred ccCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 49 VAGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 49 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+..+|||||||||.+|+.+|+.|++ |.+|+|||+..
T Consensus 17 ~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 17 RGSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 34567999999999999999999999 99999999974
No 69
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.55 E-value=2.7e-07 Score=96.43 Aligned_cols=37 Identities=30% Similarity=0.346 Sum_probs=32.6
Q ss_pred ccCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 49 VAGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 49 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..+.++||||||+|++|+++|+.|++ |.+|+||||.+
T Consensus 8 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 45 (499)
T 2qa2_A 8 HHRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLP 45 (499)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34568999999999999999999999 99999999986
No 70
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.50 E-value=9.5e-08 Score=101.44 Aligned_cols=36 Identities=33% Similarity=0.478 Sum_probs=30.6
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
..+|||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~ 83 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVE 83 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 457999999999999999999999 999999999863
No 71
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.50 E-value=7.7e-07 Score=87.20 Aligned_cols=62 Identities=19% Similarity=0.339 Sum_probs=46.2
Q ss_pred CCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEec-CCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC
Q 009873 229 GNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKS-DGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG 307 (523)
Q Consensus 229 ~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~-~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG 307 (523)
+.+.|++++++++|++|..+++ ++.+|++.+. +|+ ..++.+ +.||+|+|...++.+|..+|
T Consensus 200 l~~~gv~i~~~~~v~~i~~~~~------~v~~v~~~~~~~g~---~~~i~~---------D~vi~a~G~~p~~~~l~~~g 261 (319)
T 3cty_A 200 IKKRNIPYIMNAQVTEIVGDGK------KVTGVKYKDRTTGE---EKLIET---------DGVFIYVGLIPQTSFLKDSG 261 (319)
T ss_dssp HHHTTCCEECSEEEEEEEESSS------SEEEEEEEETTTCC---EEEECC---------SEEEECCCEEECCGGGTTSC
T ss_pred HhcCCcEEEcCCeEEEEecCCc------eEEEEEEEEcCCCc---eEEEec---------CEEEEeeCCccChHHHhhcc
Confidence 3468999999999999987654 7889988752 465 556776 99999999765555555444
Q ss_pred C
Q 009873 308 I 308 (523)
Q Consensus 308 i 308 (523)
+
T Consensus 262 l 262 (319)
T 3cty_A 262 V 262 (319)
T ss_dssp C
T ss_pred c
Confidence 3
No 72
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.48 E-value=2.3e-07 Score=94.09 Aligned_cols=34 Identities=29% Similarity=0.444 Sum_probs=32.1
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++||||||||++|+++|+.|++ |.+|+||||.+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~ 39 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQAR 39 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 46899999999999999999999 99999999986
No 73
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.48 E-value=4.9e-08 Score=98.94 Aligned_cols=33 Identities=21% Similarity=0.413 Sum_probs=31.4
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+|||||||||++|+++|+.|++ |.+|+||||.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 5899999999999999999999 99999999986
No 74
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.47 E-value=4.8e-06 Score=81.28 Aligned_cols=62 Identities=18% Similarity=0.224 Sum_probs=48.1
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEe-cCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhh
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIK-SDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLS 306 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~-~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~S 306 (523)
..++.|+++++++.|+++..+ + ++.+|++.+ .+|+ ..++.+ +.||+|+|...+..+|..+
T Consensus 199 ~~~~~gv~~~~~~~v~~i~~~-~------~~~~v~~~~~~~g~---~~~~~~---------D~vv~a~G~~p~~~~~~~~ 259 (323)
T 3f8d_A 199 VKKKPNVEFVLNSVVKEIKGD-K------VVKQVVVENLKTGE---IKELNV---------NGVFIEIGFDPPTDFAKSN 259 (323)
T ss_dssp HHTCTTEEEECSEEEEEEEES-S------SEEEEEEEETTTCC---EEEEEC---------SEEEECCCEECCHHHHHHT
T ss_pred HHhCCCcEEEeCCEEEEEecc-C------ceeEEEEEECCCCc---eEEEEc---------CEEEEEECCCCChhHHhhc
Confidence 345669999999999999865 3 678888876 3366 566776 9999999987766777776
Q ss_pred CC
Q 009873 307 GI 308 (523)
Q Consensus 307 Gi 308 (523)
|+
T Consensus 260 g~ 261 (323)
T 3f8d_A 260 GI 261 (323)
T ss_dssp TC
T ss_pred Ce
Confidence 65
No 75
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.44 E-value=1.6e-07 Score=93.36 Aligned_cols=33 Identities=27% Similarity=0.530 Sum_probs=31.5
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+|||||||+|++|+++|..|++ |++|+|||+.+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 5899999999999999999999 99999999986
No 76
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.41 E-value=1.3e-06 Score=92.56 Aligned_cols=34 Identities=32% Similarity=0.553 Sum_probs=32.3
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++||||||||++|+++|+.|++ |.+|+||||.+
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~ 59 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTD 59 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 57999999999999999999999 99999999986
No 77
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.41 E-value=1.3e-06 Score=88.44 Aligned_cols=34 Identities=32% Similarity=0.373 Sum_probs=31.9
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..+||+|||||++|+++|+.|++ |.+|+|+||.+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 45899999999999999999999 99999999986
No 78
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.40 E-value=3.9e-07 Score=96.22 Aligned_cols=36 Identities=25% Similarity=0.401 Sum_probs=32.3
Q ss_pred cCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 50 AGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 50 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
...++||||||||++|+.+|.+|++ |.+|+|||+++
T Consensus 18 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 54 (549)
T 4ap3_A 18 GTTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAAS 54 (549)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3457999999999999999999999 99999999986
No 79
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.39 E-value=5.3e-07 Score=95.35 Aligned_cols=35 Identities=31% Similarity=0.440 Sum_probs=32.8
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..++||||||||++|+++|.+|++ |.+|+|||+++
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 49 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAG 49 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 457999999999999999999999 99999999986
No 80
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.38 E-value=5.5e-07 Score=94.94 Aligned_cols=34 Identities=18% Similarity=0.386 Sum_probs=31.9
Q ss_pred CcccEEEECCCCchHHHHhhhh-c-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLS-D-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~La-e-g~~VlvlE~G~ 85 (523)
.++||||||||++|+.+|.+|+ + |.+|+|||+.+
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 4689999999999999999999 7 89999999986
No 81
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.37 E-value=1.3e-07 Score=89.77 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=32.5
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSP 87 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~ 87 (523)
++||+|||||++|+++|+.|++ |++|+||||.+.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5899999999999999999999 9999999998744
No 82
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.33 E-value=1.7e-06 Score=85.23 Aligned_cols=37 Identities=16% Similarity=0.135 Sum_probs=32.0
Q ss_pred ccCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 49 VAGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 49 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.....+||||||||++|+++|+.|++ |++|+|||+.+
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~ 55 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMM 55 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 34567999999999999999999999 99999999964
No 83
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.31 E-value=2.6e-06 Score=88.14 Aligned_cols=34 Identities=32% Similarity=0.514 Sum_probs=32.3
Q ss_pred CcccEEEECCCCchHHHHhhhhc-c-----CeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-N-----FSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g-----~~VlvlE~G~ 85 (523)
..|||||||+|++|+++|..|++ | .+|+|||+.+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~ 68 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQG 68 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCC
Confidence 57999999999999999999999 8 8999999987
No 84
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.30 E-value=2.1e-06 Score=87.61 Aligned_cols=60 Identities=18% Similarity=0.215 Sum_probs=48.6
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG 307 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG 307 (523)
..++.|++|++++.|++|..+++ ++.+|+..+ |+ ++.+ +.||+|+|..-+..++..+|
T Consensus 203 ~l~~~GV~i~~~~~v~~i~~~~~------~v~~v~l~d--G~-----~i~a---------D~Vv~a~G~~p~~~l~~~~g 260 (415)
T 3lxd_A 203 EHRAHGVDLRTGAAMDCIEGDGT------KVTGVRMQD--GS-----VIPA---------DIVIVGIGIVPCVGALISAG 260 (415)
T ss_dssp HHHHTTCEEEETCCEEEEEESSS------BEEEEEESS--SC-----EEEC---------SEEEECSCCEESCHHHHHTT
T ss_pred HHHhCCCEEEECCEEEEEEecCC------cEEEEEeCC--CC-----EEEc---------CEEEECCCCccChHHHHhCC
Confidence 55678999999999999987765 788888743 65 4666 99999999887777887777
Q ss_pred CC
Q 009873 308 IG 309 (523)
Q Consensus 308 ig 309 (523)
+.
T Consensus 261 l~ 262 (415)
T 3lxd_A 261 AS 262 (415)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 85
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.29 E-value=6.5e-06 Score=80.07 Aligned_cols=56 Identities=13% Similarity=0.233 Sum_probs=44.4
Q ss_pred CCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHH
Q 009873 229 GNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQL 302 (523)
Q Consensus 229 ~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~l 302 (523)
.++.|+++++++.|.+|..+++ ++.+|++...+|+ ..++.+ +.||+|+|...++.+
T Consensus 193 ~~~~gv~~~~~~~v~~i~~~~~------~~~~v~~~~~~g~---~~~~~~---------D~vv~a~G~~p~~~~ 248 (315)
T 3r9u_A 193 KKNEKIELITSASVDEVYGDKM------GVAGVKVKLKDGS---IRDLNV---------PGIFTFVGLNVRNEI 248 (315)
T ss_dssp HHCTTEEEECSCEEEEEEEETT------EEEEEEEECTTSC---EEEECC---------SCEEECSCEEECCGG
T ss_pred HhcCCeEEEeCcEEEEEEcCCC------cEEEEEEEcCCCC---eEEeec---------CeEEEEEcCCCCchh
Confidence 3578999999999999988776 8899988854576 566776 999999997544433
No 86
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.29 E-value=2.4e-06 Score=86.52 Aligned_cols=35 Identities=26% Similarity=0.437 Sum_probs=32.7
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..++||||||||++|+++|+.|++ |.+|+||||.+
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 356899999999999999999999 99999999986
No 87
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.26 E-value=6.6e-07 Score=87.96 Aligned_cols=34 Identities=29% Similarity=0.327 Sum_probs=31.9
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..+||||||||++|+++|+.|++ |++|+|+|+.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 35899999999999999999999 89999999986
No 88
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.25 E-value=1.5e-06 Score=93.62 Aligned_cols=35 Identities=31% Similarity=0.508 Sum_probs=32.5
Q ss_pred CCcccEEEECCCCchHHHHhhhhc--cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD--NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvlE~G~ 85 (523)
..++||||||||++|+++|+.|++ |.+|+||||.+
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 457999999999999999999998 79999999986
No 89
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.24 E-value=1.4e-06 Score=85.83 Aligned_cols=34 Identities=24% Similarity=0.262 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++||||||||++|+++|+.|++ |++|+|+|+.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 38 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLP 38 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 46899999999999999999998 99999999986
No 90
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.24 E-value=3.2e-06 Score=87.58 Aligned_cols=34 Identities=29% Similarity=0.589 Sum_probs=31.7
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+|||||||||++|+++|.+|++ |++|+||||.+
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~ 37 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKG 37 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 46999999999999999999999 99999999765
No 91
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.23 E-value=2.6e-06 Score=85.66 Aligned_cols=33 Identities=30% Similarity=0.413 Sum_probs=31.6
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+||||||||++|+++|+.|++ |.+|+||||..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~ 44 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSS 44 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 5899999999999999999999 99999999986
No 92
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.21 E-value=6.8e-06 Score=85.03 Aligned_cols=33 Identities=12% Similarity=0.293 Sum_probs=29.9
Q ss_pred ccEEEECCCCchHHHHhhhhc----cCe---eEEEecCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD----NFS---VLLVERGGS 86 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae----g~~---VlvlE~G~~ 86 (523)
+||+|||||++|+++|..|++ |.+ |+|+|+.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~ 42 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQAD 42 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCC
Confidence 699999999999999999986 688 999999863
No 93
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.20 E-value=5.5e-07 Score=87.99 Aligned_cols=35 Identities=31% Similarity=0.556 Sum_probs=32.5
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+.+|||||||||++|+++|.+|++ |++|+|+||+.
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 357999999999999999999999 99999999975
No 94
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.19 E-value=4.7e-06 Score=83.05 Aligned_cols=35 Identities=29% Similarity=0.313 Sum_probs=32.1
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
...+||||||+|++|+++|+.|++ |++|+|||+.+
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 47 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMP 47 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 346999999999999999999998 99999999986
No 95
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.17 E-value=2.7e-06 Score=89.78 Aligned_cols=34 Identities=32% Similarity=0.511 Sum_probs=32.1
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++||||||||++|+.+|.+|++ |.+|+|||+++
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 46899999999999999999998 99999999986
No 96
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.16 E-value=6.9e-07 Score=93.66 Aligned_cols=39 Identities=33% Similarity=0.490 Sum_probs=34.6
Q ss_pred CCcccEEEECCCCchHHHHhhhhc--cCeeEEEecCCCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD--NFSVLLVERGGSPFG 89 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvlE~G~~~~~ 89 (523)
+.++||||||||++|++||++|++ |++|+|||+.+..++
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 457999999999999999999986 799999999986544
No 97
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.15 E-value=7.6e-07 Score=86.71 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=31.5
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++|||||||||++|++||++|++ |++|+|+|++.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 57999999999999999999998 99999999975
No 98
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.13 E-value=1.1e-06 Score=90.83 Aligned_cols=40 Identities=33% Similarity=0.467 Sum_probs=35.8
Q ss_pred cCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCC
Q 009873 50 AGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFG 89 (523)
Q Consensus 50 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~ 89 (523)
+..++||||||||.+|+++|..|++ |++|+||||.+..++
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGG 48 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 3467999999999999999999999 999999999986554
No 99
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.12 E-value=9.8e-06 Score=83.40 Aligned_cols=36 Identities=33% Similarity=0.468 Sum_probs=32.4
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cC--eeEEEecCCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NF--SVLLVERGGSP 87 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G~~~ 87 (523)
..+||+|||||++|+++|..|++ |. +|+|+|+.+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~ 43 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSP 43 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCC
Confidence 46899999999999999999999 88 99999998633
No 100
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.12 E-value=1.2e-05 Score=78.11 Aligned_cols=31 Identities=26% Similarity=0.572 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHHhhhhc-cC-eeEEEecC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NF-SVLLVERG 84 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G 84 (523)
|||+|||+|++|+++|..|++ |+ +|+|||+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 799999999999999999998 89 99999996
No 101
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.11 E-value=1.3e-06 Score=85.99 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=32.1
Q ss_pred CCcccEEEECCCCchHHHHhhhhc---cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD---NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~ 85 (523)
..++||+|||||++|+++|++|++ |++|+|+||+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~ 100 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 457999999999999999999974 79999999986
No 102
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.11 E-value=2.4e-05 Score=79.41 Aligned_cols=60 Identities=13% Similarity=0.244 Sum_probs=48.5
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG 307 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG 307 (523)
..++.|+++++++.|++|..+++ ++.+|+.. +|+ ++.+ +.||+|+|..-+..++..+|
T Consensus 193 ~l~~~GV~i~~~~~v~~i~~~~~------~v~~V~~~--dG~-----~i~a---------D~Vv~a~G~~p~~~l~~~~g 250 (404)
T 3fg2_P 193 RHSGAGIRMHYGVRATEIAAEGD------RVTGVVLS--DGN-----TLPC---------DLVVVGVGVIPNVEIAAAAG 250 (404)
T ss_dssp HHHHTTCEEECSCCEEEEEEETT------EEEEEEET--TSC-----EEEC---------SEEEECCCEEECCHHHHHTT
T ss_pred HHHhCCcEEEECCEEEEEEecCC------cEEEEEeC--CCC-----EEEc---------CEEEECcCCccCHHHHHhCC
Confidence 55678999999999999988766 88888764 365 4666 99999999877777887777
Q ss_pred CC
Q 009873 308 IG 309 (523)
Q Consensus 308 ig 309 (523)
+.
T Consensus 251 l~ 252 (404)
T 3fg2_P 251 LP 252 (404)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 103
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.11 E-value=1.3e-05 Score=87.79 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=33.9
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPF 88 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~ 88 (523)
...+||||||||++|+++|+.|++ |++|+|||+++...
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~g 372 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIG 372 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeccccee
Confidence 346899999999999999999999 99999999987443
No 104
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.08 E-value=1.2e-06 Score=85.56 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+.|||||||||++|+++|.+|++ |++|+|+|++.
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 46999999999999999999999 99999999975
No 105
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.07 E-value=1.1e-05 Score=78.54 Aligned_cols=31 Identities=23% Similarity=0.431 Sum_probs=29.3
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEec
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVER 83 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~ 83 (523)
+|||||||+|++|+++|.+|++ |++|+|||+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC
Confidence 4899999999999999999999 899999985
No 106
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.03 E-value=1.8e-06 Score=88.47 Aligned_cols=34 Identities=44% Similarity=0.653 Sum_probs=31.6
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSP 87 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~ 87 (523)
|||||||||++|+++|++|++ |++|+|||+.+..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 799999999999999999999 9999999997633
No 107
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.00 E-value=5.2e-05 Score=78.54 Aligned_cols=59 Identities=22% Similarity=0.146 Sum_probs=44.3
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG 307 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG 307 (523)
..++.|++++++++|++|..+++ ++. |+.. +|+ ++.+ +.||+|+|..-++.++..+|
T Consensus 211 ~l~~~GV~i~~~~~v~~i~~~~~------~v~-v~~~--~g~-----~i~a---------D~Vv~a~G~~p~~~l~~~~g 267 (472)
T 3iwa_A 211 DLEKNDVVVHTGEKVVRLEGENG------KVA-RVIT--DKR-----TLDA---------DLVILAAGVSPNTQLARDAG 267 (472)
T ss_dssp HHHHTTCEEECSCCEEEEEESSS------BEE-EEEE--SSC-----EEEC---------SEEEECSCEEECCHHHHHHT
T ss_pred HHHhcCCEEEeCCEEEEEEccCC------eEE-EEEe--CCC-----EEEc---------CEEEECCCCCcCHHHHHhCC
Confidence 55678999999999999987555 555 5543 355 4666 99999999876666777777
Q ss_pred CC
Q 009873 308 IG 309 (523)
Q Consensus 308 ig 309 (523)
+.
T Consensus 268 l~ 269 (472)
T 3iwa_A 268 LE 269 (472)
T ss_dssp CC
T ss_pred cc
Confidence 63
No 108
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.99 E-value=2.8e-06 Score=84.89 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=32.8
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..++||||||+|++|+++|++|++ |++|+||||..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 457899999999999999999999 99999999986
No 109
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.96 E-value=3.8e-06 Score=83.50 Aligned_cols=31 Identities=16% Similarity=0.300 Sum_probs=29.8
Q ss_pred cEEEECCCCchHHHHhhhhc-c------CeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-N------FSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g------~~VlvlE~G~ 85 (523)
||||||||++|+++|++|++ | .+|+|||++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 89999999999999999999 8 8999999986
No 110
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.95 E-value=2e-05 Score=82.97 Aligned_cols=34 Identities=32% Similarity=0.524 Sum_probs=30.9
Q ss_pred CcccEEEECCCCchHHHHhhhhc-------------cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-------------NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-------------g~~VlvlE~G~ 85 (523)
..+||||||||++|+++|..|++ |.+|+|||+..
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 46899999999999999999987 59999999975
No 111
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.92 E-value=2.6e-05 Score=81.83 Aligned_cols=35 Identities=20% Similarity=0.373 Sum_probs=31.6
Q ss_pred cCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 50 AGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 50 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
....|||+|||||++|+++|..|++ |++|+|+|+.
T Consensus 209 ~~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~ 244 (521)
T 1hyu_A 209 KRDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER 244 (521)
T ss_dssp TSCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred ccCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 3457999999999999999999999 9999999863
No 112
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.86 E-value=6.4e-06 Score=82.92 Aligned_cols=39 Identities=38% Similarity=0.595 Sum_probs=34.8
Q ss_pred cCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCC
Q 009873 50 AGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPF 88 (523)
Q Consensus 50 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~ 88 (523)
...++||+|||||++|+++|++|++ |++|+|||+.+..+
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIG 65 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCC
Confidence 4568999999999999999999999 89999999987443
No 113
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.85 E-value=6.3e-06 Score=85.81 Aligned_cols=35 Identities=26% Similarity=0.341 Sum_probs=32.4
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..+|||||||||++|+++|++|++ |++|+||||+.
T Consensus 24 ~~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 59 (484)
T 3o0h_A 24 SFDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR 59 (484)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCC
Confidence 457999999999999999999999 99999999953
No 114
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.83 E-value=7.3e-06 Score=82.03 Aligned_cols=36 Identities=36% Similarity=0.536 Sum_probs=32.7
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPF 88 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~ 88 (523)
+|||+|||||++|+++|++|++ |++|+|+|+++..+
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 4799999999999999999999 89999999987443
No 115
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.81 E-value=4.7e-06 Score=86.95 Aligned_cols=34 Identities=29% Similarity=0.521 Sum_probs=30.9
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+|||||||||++|+++|.+|++ |++|+||||.+
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 58 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRS 58 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 46999999999999999999999 99999999975
No 116
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.81 E-value=6.4e-06 Score=85.12 Aligned_cols=36 Identities=25% Similarity=0.325 Sum_probs=32.8
Q ss_pred cccEEEECCCCchHHHHhhhhc-c------CeeEEEecCCCCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-N------FSVLLVERGGSPF 88 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g------~~VlvlE~G~~~~ 88 (523)
.+||||||||++|+++|++|++ | ++|+|||+.+...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCC
Confidence 5899999999999999999999 8 9999999986443
No 117
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.79 E-value=1e-05 Score=82.01 Aligned_cols=39 Identities=33% Similarity=0.463 Sum_probs=34.3
Q ss_pred CCcccEEEECCCCchHHHHhhhhc--cCeeEEEecCCCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD--NFSVLLVERGGSPFG 89 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvlE~G~~~~~ 89 (523)
..++||||||||++|+++|++|++ |++|+|||+.+..++
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG 45 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGG 45 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 457999999999999999999987 699999999975543
No 118
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.76 E-value=9.5e-06 Score=85.17 Aligned_cols=38 Identities=21% Similarity=0.378 Sum_probs=33.8
Q ss_pred cccCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 48 EVAGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 48 ~~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..+..+|||||||||++|+++|.+|++ |++|+||||.+
T Consensus 27 ~~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 27 LPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CCSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred cCcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 344567999999999999999999999 99999999964
No 119
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.76 E-value=1.1e-05 Score=83.90 Aligned_cols=34 Identities=29% Similarity=0.488 Sum_probs=32.3
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+|||||||||++|+++|++|++ |++|+||||+.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 47999999999999999999999 99999999986
No 120
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.76 E-value=1e-05 Score=84.92 Aligned_cols=37 Identities=32% Similarity=0.499 Sum_probs=33.5
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPF 88 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~ 88 (523)
.++||||||||++|+++|++|++ |++|+|||+.+..+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~G 40 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVG 40 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSB
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 46899999999999999999999 99999999987553
No 121
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.75 E-value=9.2e-06 Score=85.28 Aligned_cols=38 Identities=26% Similarity=0.362 Sum_probs=34.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc-c-CeeEEEecCCCCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGGSPFG 89 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~~~~~ 89 (523)
.++||||||||++|+++|++|++ | ++|+|||+.+..++
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGG 46 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCC
Confidence 46899999999999999999999 9 99999999875543
No 122
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.75 E-value=6.5e-05 Score=78.26 Aligned_cols=35 Identities=31% Similarity=0.532 Sum_probs=31.7
Q ss_pred CCcccEEEECCCCchHHHHhhhhccCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSDNFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Laeg~~VlvlE~G~ 85 (523)
...+||||||+|++|+++|++|++.++|+|||+++
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~ 140 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQYLTVALIEERG 140 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTTCCEEEECTTS
T ss_pred cccCCEEEECccHHHHHHHHHHHhcCCEEEEeCCC
Confidence 34689999999999999999998669999999986
No 123
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.75 E-value=1.3e-05 Score=83.50 Aligned_cols=39 Identities=31% Similarity=0.460 Sum_probs=34.6
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFG 89 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~ 89 (523)
...+||+|||||++|+++|++|++ |++|+|+|+.+...+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 346899999999999999999999 999999999975544
No 124
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.74 E-value=4.9e-05 Score=77.22 Aligned_cols=59 Identities=17% Similarity=0.124 Sum_probs=45.4
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG 307 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG 307 (523)
..++.|+++++++.|++|..++ ++.+|+.. +|+ ++.+ +.||+|+|..-+..++..+|
T Consensus 194 ~l~~~GV~i~~~~~v~~i~~~~-------~~~~v~~~--dg~-----~i~a---------D~Vv~a~G~~p~~~l~~~~g 250 (410)
T 3ef6_A 194 LLTELGVQVELGTGVVGFSGEG-------QLEQVMAS--DGR-----SFVA---------DSALICVGAEPADQLARQAG 250 (410)
T ss_dssp HHHHHTCEEECSCCEEEEECSS-------SCCEEEET--TSC-----EEEC---------SEEEECSCEEECCHHHHHTT
T ss_pred HHHHCCCEEEeCCEEEEEeccC-------cEEEEEEC--CCC-----EEEc---------CEEEEeeCCeecHHHHHhCC
Confidence 4567899999999999997533 56677664 365 4666 99999999887777888877
Q ss_pred CC
Q 009873 308 IG 309 (523)
Q Consensus 308 ig 309 (523)
+.
T Consensus 251 l~ 252 (410)
T 3ef6_A 251 LA 252 (410)
T ss_dssp CC
T ss_pred Cc
Confidence 64
No 125
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.74 E-value=1.3e-05 Score=83.57 Aligned_cols=39 Identities=33% Similarity=0.506 Sum_probs=34.0
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFG 89 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~ 89 (523)
++++||||||||++|+++|++|++ |++|+|||+.+..++
T Consensus 37 ~~~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 76 (495)
T 2vvm_A 37 DGPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGG 76 (495)
T ss_dssp -CCEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBT
T ss_pred ccCCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 345899999999999999999999 999999999875543
No 126
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.73 E-value=1.2e-05 Score=83.34 Aligned_cols=40 Identities=28% Similarity=0.423 Sum_probs=33.0
Q ss_pred cCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCC
Q 009873 50 AGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFG 89 (523)
Q Consensus 50 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~ 89 (523)
....+||||||||++|+++|+.|++ |++|+|||+.+..++
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGG 53 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBT
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc
Confidence 3457899999999999999999999 999999999875543
No 127
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.73 E-value=1e-05 Score=83.96 Aligned_cols=35 Identities=31% Similarity=0.534 Sum_probs=32.5
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..+|||||||||++|+++|++|++ |++|+|||++.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 457999999999999999999999 99999999875
No 128
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.72 E-value=1.4e-05 Score=82.67 Aligned_cols=34 Identities=24% Similarity=0.360 Sum_probs=31.6
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+|||||||||++|+++|++|++ |++|+||||+.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~ 38 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFR 38 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 46999999999999999999999 99999999953
No 129
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.72 E-value=1.5e-05 Score=81.30 Aligned_cols=38 Identities=21% Similarity=0.322 Sum_probs=34.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc-c-CeeEEEecCCCCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGGSPFG 89 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~~~~~ 89 (523)
.++||||||||++|+++|++|++ | ++|+|+|+.+..++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGG 44 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCC
Confidence 46899999999999999999999 8 89999999875543
No 130
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.71 E-value=9.7e-06 Score=84.44 Aligned_cols=35 Identities=29% Similarity=0.464 Sum_probs=32.3
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..+|||||||||++|+++|.+|++ |++|+||||..
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 457999999999999999999999 99999999854
No 131
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.70 E-value=1.7e-05 Score=79.12 Aligned_cols=36 Identities=22% Similarity=0.394 Sum_probs=33.1
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecC-CC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERG-GS 86 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G-~~ 86 (523)
...+||+|||||++|+++|++|++ |++|+|+|+. +.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANR 79 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccc
Confidence 457899999999999999999999 9999999998 63
No 132
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.70 E-value=9.9e-06 Score=85.07 Aligned_cols=34 Identities=32% Similarity=0.547 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+||+||||||++|.++|.++++ |+||+|||+..
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 46999999999999999999999 99999999875
No 133
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.69 E-value=1.2e-05 Score=83.77 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+|||||||||++|+++|.+|++ |++|+|||++.
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 46999999999999999999999 99999999975
No 134
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.68 E-value=8.5e-05 Score=80.21 Aligned_cols=34 Identities=26% Similarity=0.521 Sum_probs=31.5
Q ss_pred CcccEEEECCCCchHHHHhhhhc------cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD------NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae------g~~VlvlE~G~ 85 (523)
.++||||||||++|+++|+.|++ |.+|+||||.+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 36899999999999999999987 79999999975
No 135
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.67 E-value=1.8e-05 Score=82.05 Aligned_cols=34 Identities=32% Similarity=0.441 Sum_probs=31.4
Q ss_pred ccEEEECCCCchHHHHhhhhc-cC--eeEEEecCCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NF--SVLLVERGGSP 87 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G~~~ 87 (523)
+||||||||++|+++|++|++ |. +|+|||+.+..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 699999999999999999999 88 99999998644
No 136
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.66 E-value=1.7e-05 Score=80.64 Aligned_cols=34 Identities=26% Similarity=0.481 Sum_probs=31.4
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCe-eEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFS-VLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~-VlvlE~G~ 85 (523)
.++||||||||++|+++|+.|++ |.+ |+||||.+
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 35899999999999999999999 999 99999986
No 137
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.66 E-value=1.6e-05 Score=81.87 Aligned_cols=38 Identities=29% Similarity=0.394 Sum_probs=34.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFG 89 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~ 89 (523)
.++||||||||++|+++|++|++ |++|+|||+.+...+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 42 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGG 42 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCC
Confidence 46899999999999999999999 999999999875543
No 138
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.65 E-value=2.4e-05 Score=80.16 Aligned_cols=40 Identities=33% Similarity=0.465 Sum_probs=35.6
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFGN 90 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~~ 90 (523)
..++||||||+|.+|+++|.+|++ |++|+|+|+.+..++.
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 44 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGE 44 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccc
Confidence 457999999999999999999999 9999999999765543
No 139
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.63 E-value=0.00021 Score=74.53 Aligned_cols=37 Identities=22% Similarity=0.182 Sum_probs=29.2
Q ss_pred ccCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 49 VAGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 49 ~~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+.++-|||||||+|++|+++|..|.+ +...+++|+..
T Consensus 35 p~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~ 72 (501)
T 4b63_A 35 PQDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASN 72 (501)
T ss_dssp CTTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC--
T ss_pred CCCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccc
Confidence 34566999999999999999999988 66666666654
No 140
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.61 E-value=2.3e-05 Score=76.74 Aligned_cols=34 Identities=29% Similarity=0.638 Sum_probs=31.9
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..+||+|||+|++|+++|..|++ |++|+|||+..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 41 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM 41 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 46999999999999999999999 99999999983
No 141
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.60 E-value=2.3e-05 Score=81.48 Aligned_cols=34 Identities=26% Similarity=0.366 Sum_probs=31.5
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
..+|||||||||++|+++|++|++ |++|+||||+
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 457999999999999999999999 9999999964
No 142
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.58 E-value=2.9e-05 Score=80.43 Aligned_cols=35 Identities=31% Similarity=0.428 Sum_probs=32.1
Q ss_pred cccEEEECCCCchHHHHhhhhc-c--CeeEEEecCCCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-N--FSVLLVERGGSP 87 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g--~~VlvlE~G~~~ 87 (523)
.+||||||||++|+++|++|++ | ++|+|||+.+..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 5799999999999999999999 8 999999997643
No 143
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.57 E-value=2.9e-05 Score=74.74 Aligned_cols=33 Identities=36% Similarity=0.638 Sum_probs=31.0
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.|||+|||||++|+++|..|++ |++|+|+|++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3899999999999999999999 89999999975
No 144
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.56 E-value=3.2e-05 Score=68.73 Aligned_cols=32 Identities=41% Similarity=0.712 Sum_probs=30.8
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
||++|||+|++|+.+|..|++ |.+|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999 99999999986
No 145
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.56 E-value=3.5e-05 Score=80.52 Aligned_cols=39 Identities=26% Similarity=0.348 Sum_probs=34.0
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFG 89 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~ 89 (523)
...+||||||||++|+++|++|++ |++|+|+|+.+...+
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 50 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGG 50 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCC
Confidence 356899999999999999999999 999999999986544
No 146
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.55 E-value=2.5e-05 Score=79.86 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=30.8
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+||||||||++|+++|+.|++ |++|+||||..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4799999999999999999999 99999999985
No 147
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.53 E-value=3.5e-05 Score=79.65 Aligned_cols=34 Identities=32% Similarity=0.576 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++|||||||||++|+++|.+|++ |++|+|+|++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 46999999999999999999999 99999999984
No 148
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.51 E-value=3.7e-05 Score=79.17 Aligned_cols=34 Identities=29% Similarity=0.513 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++|||||||||++|+++|++|++ |++|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 46999999999999999999999 99999999984
No 149
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.50 E-value=4.9e-05 Score=76.47 Aligned_cols=36 Identities=19% Similarity=0.372 Sum_probs=32.7
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPF 88 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~ 88 (523)
++||+|||||++|+++|++|++ |++|+|+|+.+...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 4799999999999999999999 89999999987443
No 150
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.49 E-value=5e-05 Score=79.77 Aligned_cols=64 Identities=17% Similarity=0.242 Sum_probs=46.6
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHH-HHHhh
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQ-LLLLS 306 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~-lLl~S 306 (523)
..++.|++|+++++|++|..++++ ++.++.+...+|+ .++.+ +.||+|+|..-+.. +|..+
T Consensus 264 ~l~~~GV~i~~~~~V~~i~~~~~~-----~v~~~~v~~~~G~----~~i~a---------D~Vv~A~G~~p~~~~~l~~~ 325 (523)
T 1mo9_A 264 RMKEQGMEIISGSNVTRIEEDANG-----RVQAVVAMTPNGE----MRIET---------DFVFLGLGEQPRSAELAKIL 325 (523)
T ss_dssp HHHHTTCEEESSCEEEEEEECTTS-----BEEEEEEEETTEE----EEEEC---------SCEEECCCCEECCHHHHHHH
T ss_pred HHHhCCcEEEECCEEEEEEEcCCC-----ceEEEEEEECCCc----EEEEc---------CEEEECcCCccCCccCHHHc
Confidence 556789999999999999875543 6655555543442 24776 99999999876666 67777
Q ss_pred CCC
Q 009873 307 GIG 309 (523)
Q Consensus 307 Gig 309 (523)
|+.
T Consensus 326 gl~ 328 (523)
T 1mo9_A 326 GLD 328 (523)
T ss_dssp TCC
T ss_pred CCc
Confidence 763
No 151
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.48 E-value=4.2e-05 Score=79.37 Aligned_cols=34 Identities=38% Similarity=0.676 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+|||||||||++|+++|.+|++ |++|+|||++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 47999999999999999999999 99999999974
No 152
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.47 E-value=5.4e-05 Score=78.66 Aligned_cols=38 Identities=24% Similarity=0.279 Sum_probs=33.6
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-c-CeeEEEecCCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGGSPF 88 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~~~~ 88 (523)
...+||+|||||++|+++|++|++ | .+|+|+|+.+..+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPG 46 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 346899999999999999999999 7 8999999997443
No 153
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.47 E-value=3.8e-05 Score=79.80 Aligned_cols=35 Identities=34% Similarity=0.589 Sum_probs=32.2
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
.+|||||||||++|+++|.+|++ |++|+|||+.+.
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~ 40 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT 40 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 46999999999999999999999 999999999653
No 154
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.47 E-value=5e-05 Score=78.54 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=31.9
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+|||||||||++|+++|.+|++ |++|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46899999999999999999999 99999999984
No 155
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.47 E-value=6e-05 Score=78.02 Aligned_cols=36 Identities=25% Similarity=0.495 Sum_probs=33.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSP 87 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~ 87 (523)
.+|||||||+|++|+++|.+|++ |++|+|+|+.+..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 46999999999999999999999 9999999998643
No 156
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.46 E-value=4.8e-05 Score=78.74 Aligned_cols=34 Identities=26% Similarity=0.565 Sum_probs=31.9
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
+|||||||||++|+++|.+|++ |++|+|+|+.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 36 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGA 36 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5899999999999999999999 999999999863
No 157
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.45 E-value=3.8e-05 Score=79.71 Aligned_cols=34 Identities=35% Similarity=0.640 Sum_probs=31.8
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+|||||||+|++|+++|.+|++ |++|+|+|+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 38 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 46999999999999999999999 99999999965
No 158
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.44 E-value=5e-05 Score=78.29 Aligned_cols=34 Identities=26% Similarity=0.467 Sum_probs=31.7
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
+|||||||||++|+++|.+|++ |++|+|||+++.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 35 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKA 35 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4899999999999999999999 999999999853
No 159
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.44 E-value=5e-05 Score=75.68 Aligned_cols=33 Identities=30% Similarity=0.642 Sum_probs=31.3
Q ss_pred cccEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
+|||||||||++|+++|.+|++ |. +|+|||+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 5899999999999999999998 88 999999986
No 160
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.44 E-value=5.5e-05 Score=78.99 Aligned_cols=33 Identities=39% Similarity=0.631 Sum_probs=31.4
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+|||||||||++|+++|.+|++ |++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5899999999999999999999 99999999985
No 161
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.42 E-value=5.5e-05 Score=77.98 Aligned_cols=34 Identities=29% Similarity=0.431 Sum_probs=31.6
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+|||||||||++|+++|.+|++ |++|+|+|+..
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 36 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN 36 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 36899999999999999999999 99999999983
No 162
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.41 E-value=5.8e-05 Score=78.22 Aligned_cols=35 Identities=23% Similarity=0.402 Sum_probs=32.5
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
.+|||||||||++|+++|.+|++ |++|+|||+.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNET 40 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 46999999999999999999999 999999999863
No 163
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.40 E-value=6.4e-05 Score=74.29 Aligned_cols=33 Identities=33% Similarity=0.256 Sum_probs=31.1
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
+||||||+|.+|+.+|+.|++ |.+|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 699999999999999999999 999999999863
No 164
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.39 E-value=5.4e-05 Score=73.81 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=30.7
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
..+||+|||+|++|+++|+.|++ |++|+|+|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC
Confidence 35899999999999999999999 8999999975
No 165
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.39 E-value=5.3e-05 Score=74.59 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=31.5
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
...+||||||+|++|+++|..|++ |++|+|+|+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 457999999999999999999999 9999999975
No 166
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.37 E-value=7.8e-05 Score=78.56 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=31.6
Q ss_pred CcccEEEECCCCchHHHHhhhhc----cCeeEEEecCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD----NFSVLLVERGGS 86 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae----g~~VlvlE~G~~ 86 (523)
..+||||||||++|+++|+.|++ |.+|+|||+...
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 42 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI 42 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 46899999999999999999987 699999999753
No 167
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.37 E-value=7.9e-05 Score=77.67 Aligned_cols=39 Identities=26% Similarity=0.413 Sum_probs=34.5
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFG 89 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~ 89 (523)
...+||||||||++|+++|+.|++ |.+|+|||+.+...+
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 456899999999999999999999 999999999875443
No 168
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.35 E-value=6.7e-05 Score=77.51 Aligned_cols=33 Identities=27% Similarity=0.425 Sum_probs=31.2
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+|||||||||++|+++|.+|++ |++|+|+|+..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 36 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY 36 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 5899999999999999999999 99999999983
No 169
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.35 E-value=5.9e-05 Score=74.02 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=30.3
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEec
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVER 83 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~ 83 (523)
..+||||||+|++|+++|+.|++ |++|+|||+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 36899999999999999999999 999999998
No 170
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.34 E-value=7.8e-05 Score=76.87 Aligned_cols=34 Identities=24% Similarity=0.407 Sum_probs=31.5
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+|||||||||++|+++|.+|++ |++|+|+|++.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCC
Confidence 46999999999999999999999 99999999953
No 171
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.29 E-value=9.6e-05 Score=76.34 Aligned_cols=33 Identities=36% Similarity=0.605 Sum_probs=31.6
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+|||||||+|++|+++|.+|++ |++|+|+|+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 6999999999999999999999 99999999986
No 172
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.29 E-value=0.00012 Score=79.41 Aligned_cols=38 Identities=29% Similarity=0.440 Sum_probs=34.2
Q ss_pred cCCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCC
Q 009873 50 AGKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSP 87 (523)
Q Consensus 50 ~~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~ 87 (523)
....+||||||||++|+++|+.|++ |++|+|+|+++..
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4567899999999999999999999 9999999998643
No 173
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.28 E-value=0.0001 Score=76.35 Aligned_cols=37 Identities=30% Similarity=0.367 Sum_probs=32.1
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cC-eeEEEecCCCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NF-SVLLVERGGSPF 88 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~~~~ 88 (523)
..+||+|||+|++|+++|++|++ |. +|+|+|+++...
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~g 41 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIG 41 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSB
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCC
Confidence 46899999999999999999999 88 899999987543
No 174
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.28 E-value=0.00012 Score=73.94 Aligned_cols=31 Identities=29% Similarity=0.423 Sum_probs=29.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.|+|||||++|+++|+.|++ |.+|+|+||.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 59999999999999999999 99999999976
No 175
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.22 E-value=0.00015 Score=76.93 Aligned_cols=40 Identities=35% Similarity=0.375 Sum_probs=36.4
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFGN 90 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~~ 90 (523)
..+|||||||+|..|+++|..|++ |++||+|||.+..+++
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGN 46 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCc
Confidence 458999999999999999999999 9999999999877654
No 176
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.21 E-value=0.00013 Score=73.11 Aligned_cols=32 Identities=25% Similarity=0.535 Sum_probs=29.8
Q ss_pred cEEEECCCCchHHHHhhhhc---cCeeEEEecCCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD---NFSVLLVERGGS 86 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~~ 86 (523)
||||||||++|+++|+.|++ |.+|+|+||.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 89999999999999999986 799999999863
No 177
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.21 E-value=0.00018 Score=76.05 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=31.7
Q ss_pred CcccEEEECCCCchHHHHhhhhc----cCeeEEEecCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD----NFSVLLVERGGS 86 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae----g~~VlvlE~G~~ 86 (523)
..+||||||||++|+++|..|++ |.+|+|||+...
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 57899999999999999999987 589999999753
No 178
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.21 E-value=0.00018 Score=74.06 Aligned_cols=37 Identities=22% Similarity=0.309 Sum_probs=33.4
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSP 87 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~ 87 (523)
...+||+|||||++|+++|+.|++ |++|+|+|+.+..
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 356899999999999999999999 9999999998643
No 179
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.20 E-value=0.00011 Score=77.00 Aligned_cols=34 Identities=38% Similarity=0.539 Sum_probs=29.0
Q ss_pred cccEEEECCCCchHHHHhhhhc----cCeeEEEecCCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD----NFSVLLVERGGS 86 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae----g~~VlvlE~G~~ 86 (523)
.+||||||||++|+++|+.|++ |.+|+|||+...
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 3799999999999999999987 599999999763
No 180
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.20 E-value=0.00015 Score=75.32 Aligned_cols=31 Identities=19% Similarity=0.491 Sum_probs=29.3
Q ss_pred CcccEEEECCCCchHHHHhhhhc--cCeeEEEe
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD--NFSVLLVE 82 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvlE 82 (523)
.+|||||||||++|+++|++|++ |++|+|||
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 46999999999999999999988 89999999
No 181
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.18 E-value=0.00014 Score=77.71 Aligned_cols=34 Identities=21% Similarity=0.399 Sum_probs=31.8
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
...|||||||||++|+++|.+|++ |++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 467999999999999999999999 9999999984
No 182
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.16 E-value=0.00016 Score=75.29 Aligned_cols=32 Identities=28% Similarity=0.474 Sum_probs=29.9
Q ss_pred CcccEEEECCCCchHHHHhhhhc--cCeeEEEec
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD--NFSVLLVER 83 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae--g~~VlvlE~ 83 (523)
.+|||||||||++|+++|++|++ |++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 47999999999999999999988 899999993
No 183
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.12 E-value=0.00018 Score=74.97 Aligned_cols=33 Identities=21% Similarity=0.430 Sum_probs=30.5
Q ss_pred cccEEEECCCCchHHHHhhhhc----cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD----NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae----g~~VlvlE~G~ 85 (523)
+|||||||||++|+++|++|++ |++|+|||++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 4899999999999999999986 68999999986
No 184
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.05 E-value=0.00026 Score=71.04 Aligned_cols=34 Identities=18% Similarity=0.401 Sum_probs=30.1
Q ss_pred CcccEEEECCCCchHHHHhhhhc-c--CeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-N--FSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g--~~VlvlE~G~ 85 (523)
.+|||||||||++|+++|.+|++ | .+|+|+|+..
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 35899999999999999999998 7 5799999875
No 185
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.01 E-value=0.0003 Score=71.81 Aligned_cols=60 Identities=13% Similarity=0.144 Sum_probs=45.4
Q ss_pred hCCCCCeEEEeccEEEEEEE--cCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHh
Q 009873 228 AGNPKNLVVLLNATVNNIIF--SNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLL 305 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~--~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~ 305 (523)
..++.|+++++++.|++|.. +++ ++.+|++. +|+ ++.+ +.||+|+|..-+..++..
T Consensus 200 ~l~~~GV~i~~~~~v~~i~~~~~~~------~v~~v~~~--~G~-----~i~~---------D~Vv~a~G~~p~~~l~~~ 257 (431)
T 1q1r_A 200 LHREAGVDIRTGTQVCGFEMSTDQQ------KVTAVLCE--DGT-----RLPA---------DLVIAGIGLIPNCELASA 257 (431)
T ss_dssp HHHHHTCEEECSCCEEEEEECTTTC------CEEEEEET--TSC-----EEEC---------SEEEECCCEEECCHHHHH
T ss_pred HHHhCCeEEEeCCEEEEEEeccCCC------cEEEEEeC--CCC-----EEEc---------CEEEECCCCCcCcchhhc
Confidence 45567999999999999986 344 67777653 465 3666 999999998766677777
Q ss_pred hCCC
Q 009873 306 SGIG 309 (523)
Q Consensus 306 SGig 309 (523)
+|+.
T Consensus 258 ~gl~ 261 (431)
T 1q1r_A 258 AGLQ 261 (431)
T ss_dssp TTCC
T ss_pred cCCC
Confidence 7764
No 186
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.97 E-value=0.00043 Score=74.92 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=33.6
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSP 87 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~ 87 (523)
...+||||||||++|+.+|..|++ |++|+|+|+.+..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 456899999999999999999999 9999999998644
No 187
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.96 E-value=0.00029 Score=73.27 Aligned_cols=34 Identities=15% Similarity=0.300 Sum_probs=31.7
Q ss_pred cccEEEECCCCchHHHHhhhhc-c---CeeEEEecCCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-N---FSVLLVERGGS 86 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g---~~VlvlE~G~~ 86 (523)
++||||||+|++|+++|.+|++ | .+|+|||+.+.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 5899999999999999999998 7 99999999863
No 188
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.95 E-value=0.004 Score=62.34 Aligned_cols=32 Identities=25% Similarity=0.490 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-+++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE 178 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc
Confidence 469999999999999999999 99999999986
No 189
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.95 E-value=0.00034 Score=69.76 Aligned_cols=33 Identities=27% Similarity=0.460 Sum_probs=30.2
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
--||||||+|++|+++|.+|++ | +|+|+|++..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 3599999999999999999998 9 9999999874
No 190
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.94 E-value=0.00044 Score=75.54 Aligned_cols=37 Identities=22% Similarity=0.394 Sum_probs=33.6
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSP 87 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~ 87 (523)
...+||+|||||++|+.+|..|++ |++|+|+|+.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 456899999999999999999999 9999999998744
No 191
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.94 E-value=0.00036 Score=71.75 Aligned_cols=33 Identities=21% Similarity=0.169 Sum_probs=30.5
Q ss_pred ccEEEECCCCchHHHHhhhhc---cCeeEEEecCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD---NFSVLLVERGGS 86 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~~ 86 (523)
+||||||||++|+++|.+|++ |.+|+|||+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 599999999999999999987 799999999873
No 192
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.89 E-value=0.00045 Score=74.61 Aligned_cols=39 Identities=28% Similarity=0.392 Sum_probs=34.5
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFG 89 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~ 89 (523)
...+||+|||||++|+++|+.|++ |++|+|+|+.+..++
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 456899999999999999999999 999999999875443
No 193
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.86 E-value=0.00048 Score=69.79 Aligned_cols=35 Identities=17% Similarity=0.328 Sum_probs=31.6
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cC--eeEEEecCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NF--SVLLVERGGS 86 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G~~ 86 (523)
.++||||||+|++|+++|.+|++ |. +|+|+|+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAE 43 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCC
Confidence 46899999999999999999998 75 6999999874
No 194
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.85 E-value=0.00041 Score=78.13 Aligned_cols=36 Identities=28% Similarity=0.400 Sum_probs=33.1
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSP 87 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~ 87 (523)
..|||||||+|++|+.+|.+|++ |++|+|||+.+..
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~ 163 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 46899999999999999999999 9999999998644
No 195
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.85 E-value=0.00051 Score=71.44 Aligned_cols=59 Identities=19% Similarity=0.258 Sum_probs=44.1
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG 307 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG 307 (523)
..++.|+++++++.|++|..+++ ++ .|+. .+|+ ++.+ +.||+|+|..-++.++..+|
T Consensus 235 ~l~~~GV~v~~~~~V~~i~~~~~------~~-~v~l--~dG~-----~i~a---------D~Vv~a~G~~pn~~l~~~~g 291 (493)
T 1m6i_A 235 KVRREGVKVMPNAIVQSVGVSSG------KL-LIKL--KDGR-----KVET---------DHIVAAVGLEPNVELAKTGG 291 (493)
T ss_dssp HHHTTTCEEECSCCEEEEEEETT------EE-EEEE--TTSC-----EEEE---------SEEEECCCEEECCTTHHHHT
T ss_pred HHHhcCCEEEeCCEEEEEEecCC------eE-EEEE--CCCC-----EEEC---------CEEEECCCCCccHHHHHHcC
Confidence 55678999999999999986554 43 4544 3465 4676 99999999876666777777
Q ss_pred CC
Q 009873 308 IG 309 (523)
Q Consensus 308 ig 309 (523)
+.
T Consensus 292 l~ 293 (493)
T 1m6i_A 292 LE 293 (493)
T ss_dssp CC
T ss_pred Cc
Confidence 63
No 196
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.83 E-value=0.005 Score=59.31 Aligned_cols=54 Identities=22% Similarity=0.438 Sum_probs=41.5
Q ss_pred CCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEec-CCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHH
Q 009873 232 KNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKS-DGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLL 303 (523)
Q Consensus 232 ~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~-~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lL 303 (523)
.|++++++++|++|..+++ ++.+|++.+. +|+ ..++.+ +.||+|+|...++.+|
T Consensus 193 ~gv~v~~~~~v~~i~~~~~------~v~~v~~~~~~~g~---~~~i~~---------D~vi~a~G~~p~~~~l 247 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDGS------KVVGLEYRDRVSGD---IHNIEL---------AGIFVQIGLLPNTNWL 247 (310)
T ss_dssp TTEEEESSEEEEEEEESSS------SEEEEEEEETTTCC---EEEEEC---------SEEEECSCEEESCGGG
T ss_pred CCeEEecCCceEEEEcCCC------cEEEEEEEECCCCc---EEEEEc---------CEEEEeeCCccCchHH
Confidence 6899999999999986655 7889998863 365 567776 9999999865444443
No 197
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.76 E-value=0.00073 Score=74.49 Aligned_cols=39 Identities=28% Similarity=0.392 Sum_probs=34.5
Q ss_pred CCcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCCCC
Q 009873 51 GKSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSPFG 89 (523)
Q Consensus 51 ~~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~~~ 89 (523)
...+||+|||+|++|+++|+.|++ |++|+|+|+.+..++
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 456799999999999999999999 999999999875543
No 198
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.76 E-value=0.0075 Score=59.56 Aligned_cols=59 Identities=20% Similarity=0.133 Sum_probs=43.7
Q ss_pred CCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC
Q 009873 231 PKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG 307 (523)
Q Consensus 231 ~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG 307 (523)
+.|++++++++|++|..+++ ++.+|++...+|+ ..++.+ +.||+|+|.-.++.+|..+|
T Consensus 214 ~~gv~i~~~~~v~~i~~~~~------~v~~v~~~~~~g~---~~~i~~---------D~vi~a~G~~p~~~~l~~~~ 272 (360)
T 3ab1_A 214 NGTIDVYLETEVASIEESNG------VLTRVHLRSSDGS---KWTVEA---------DRLLILIGFKSNLGPLARWD 272 (360)
T ss_dssp HTSEEEESSEEEEEEEEETT------EEEEEEEEETTCC---EEEEEC---------SEEEECCCBCCSCGGGGGSS
T ss_pred cCceEEEcCcCHHHhccCCC------ceEEEEEEecCCC---eEEEeC---------CEEEECCCCCCCHHHHHhhc
Confidence 46789999999999988765 8888888744575 566776 99999999644434444333
No 199
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.75 E-value=0.00059 Score=70.08 Aligned_cols=34 Identities=12% Similarity=0.329 Sum_probs=31.0
Q ss_pred ccEEEECCCCchHHHHhhhhc---cCeeEEEecCCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD---NFSVLLVERGGSP 87 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~~~ 87 (523)
.||||||||++|+++|.+|++ +.+|+|||+++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 599999999999999999987 6899999999744
No 200
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.75 E-value=0.00059 Score=70.70 Aligned_cols=35 Identities=29% Similarity=0.581 Sum_probs=31.1
Q ss_pred cccEEEECCCCchHHHHhhhhc---cCeeEEEecCCCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD---NFSVLLVERGGSP 87 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~~~ 87 (523)
.+||||||+|++|+++|.+|++ |.+|+|||+.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 3699999999999999999987 6899999998743
No 201
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.74 E-value=0.00065 Score=69.72 Aligned_cols=35 Identities=20% Similarity=0.366 Sum_probs=31.5
Q ss_pred cccEEEECCCCchHHHHhhhhc---cCeeEEEecCCCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD---NFSVLLVERGGSP 87 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~~~ 87 (523)
.+||||||||++|+++|.+|++ +.+|+|+|+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 4799999999999999999987 5899999999744
No 202
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.73 E-value=0.00065 Score=69.67 Aligned_cols=33 Identities=21% Similarity=0.352 Sum_probs=30.3
Q ss_pred ccEEEECCCCchHHHHhhhhc---cCeeEEEecCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD---NFSVLLVERGGS 86 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~~ 86 (523)
.||||||+|++|+++|.+|++ |.+|+|||+.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDF 36 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCc
Confidence 389999999999999999987 699999999874
No 203
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.70 E-value=0.0032 Score=64.15 Aligned_cols=31 Identities=35% Similarity=0.586 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+.+
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~ 182 (431)
T 1q1r_A 151 RLVVIGGGYIGLEVAATAIKANMHVTLLDTAA 182 (431)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 59999999999999999999 99999999986
No 204
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.68 E-value=0.0059 Score=59.08 Aligned_cols=54 Identities=11% Similarity=0.261 Sum_probs=41.2
Q ss_pred CCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEec-C-CCCCceeEEEecCCCCCCCCCcEEEecCCchhHHH
Q 009873 231 PKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKS-D-GSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQL 302 (523)
Q Consensus 231 ~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~-~-g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~l 302 (523)
+.|++++++++|++|..+++ ++.+|++.+. + |+ ..++.+ +.||+|+|.-.++.+
T Consensus 196 ~~gv~i~~~~~v~~i~~~~~------~v~~v~~~~~~~~g~---~~~i~~---------D~vv~a~G~~p~~~~ 251 (320)
T 1trb_A 196 NGNIILHTNRTLEEVTGDQM------GVTGVRLRDTQNSDN---IESLDV---------AGLFVAIGHSPNTAI 251 (320)
T ss_dssp TSSEEEECSCEEEEEEECSS------SEEEEEEECCTTCCC---CEEEEC---------SEEEECSCEEESCGG
T ss_pred cCCeEEEcCceeEEEEcCCC------ceEEEEEEeccCCCc---eEEEEc---------CEEEEEeCCCCChHH
Confidence 57899999999999987765 7888988752 2 44 456776 999999997544443
No 205
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.67 E-value=0.00084 Score=68.98 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=31.7
Q ss_pred cccEEEECCCCchHHHHhhhhc--------cCeeEEEecCCCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD--------NFSVLLVERGGSP 87 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae--------g~~VlvlE~G~~~ 87 (523)
.+||+|||||++|+.+|..|++ +.+|+|+|+.+..
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 4799999999999999999987 7999999998644
No 206
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.66 E-value=0.00089 Score=68.88 Aligned_cols=36 Identities=28% Similarity=0.301 Sum_probs=32.2
Q ss_pred CcccEEEECCCCchHHHHhhhhc-c--CeeEEEecCCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-N--FSVLLVERGGSP 87 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g--~~VlvlE~G~~~ 87 (523)
..+||||||+|++|+.+|..|++ + .+|+|+|+.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 35799999999999999999998 7 999999998754
No 207
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.65 E-value=0.011 Score=61.70 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=29.7
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.++|||+|..|+-+|..|++ |.+|.++|+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~ 247 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE 247 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC
Confidence 469999999999999999998 99999999986
No 208
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.58 E-value=0.00095 Score=67.53 Aligned_cols=32 Identities=22% Similarity=0.273 Sum_probs=29.6
Q ss_pred cEEEECCCCchHHHHhhhhc----cCeeEEEecCCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD----NFSVLLVERGGS 86 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae----g~~VlvlE~G~~ 86 (523)
||||||||++|+++|.+|++ |.+|+|||+.+.
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 79999999999999999987 599999999973
No 209
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.57 E-value=0.00094 Score=68.10 Aligned_cols=33 Identities=24% Similarity=0.446 Sum_probs=30.4
Q ss_pred ccEEEECCCCchHHHHhhhhc---cCeeEEEecCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD---NFSVLLVERGGS 86 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~~ 86 (523)
.||||||||++|+++|.+|++ +.+|+|||+.+.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCC
Confidence 589999999999999999988 589999999874
No 210
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.57 E-value=0.001 Score=75.35 Aligned_cols=36 Identities=17% Similarity=0.285 Sum_probs=32.4
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cC-eeEEEecCCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NF-SVLLVERGGSP 87 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~~~ 87 (523)
..+||+|||||++|+++|..|++ |+ +|+|+|+.+..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 46899999999999999999999 88 79999998643
No 211
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.55 E-value=0.013 Score=60.09 Aligned_cols=32 Identities=28% Similarity=0.404 Sum_probs=29.7
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 202 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP 202 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 369999999999999999998 99999999986
No 212
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.54 E-value=0.0015 Score=66.81 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=30.3
Q ss_pred ccEEEECCCCchHHHHhhhhc----cCeeEEEecCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD----NFSVLLVERGGS 86 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae----g~~VlvlE~G~~ 86 (523)
.||||||||++|+++|..|++ +.+|+|||+.+.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 689999999999999999987 589999999873
No 213
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.52 E-value=0.0011 Score=70.44 Aligned_cols=36 Identities=36% Similarity=0.489 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc---cCeeEEEecCCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD---NFSVLLVERGGSP 87 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~~~ 87 (523)
...||||||||++|+++|.+|++ +.+|+|+|+.+..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 45799999999999999999987 5899999999743
No 214
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.46 E-value=0.012 Score=56.66 Aligned_cols=56 Identities=11% Similarity=0.064 Sum_probs=42.2
Q ss_pred CCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEec-CCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHH
Q 009873 231 PKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKS-DGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLL 304 (523)
Q Consensus 231 ~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~-~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl 304 (523)
+.|+++++++.|+++..+++ ++.+|++.+. +|+ ..++.+ +.||+|+|..-+..+|.
T Consensus 191 ~~gv~v~~~~~v~~i~~~~~------~v~~v~~~~~~~g~---~~~i~~---------D~vi~a~G~~p~~~~l~ 247 (311)
T 2q0l_A 191 NDKIEFLTPYVVEEIKGDAS------GVSSLSIKNTATNE---KRELVV---------PGFFIFVGYDVNNAVLK 247 (311)
T ss_dssp CTTEEEETTEEEEEEEEETT------EEEEEEEEETTTCC---EEEEEC---------SEEEECSCEEECCGGGB
T ss_pred CCCeEEEeCCEEEEEECCCC------cEeEEEEEecCCCc---eEEEec---------CEEEEEecCccChhhhh
Confidence 46899999999999987655 7888888752 465 566776 99999999754444443
No 215
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.44 E-value=0.011 Score=60.58 Aligned_cols=32 Identities=31% Similarity=0.427 Sum_probs=29.5
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~ 200 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD 200 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC
Confidence 359999999999999999998 99999999986
No 216
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.43 E-value=0.0095 Score=60.89 Aligned_cols=34 Identities=18% Similarity=0.291 Sum_probs=31.3
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
...+++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 182 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc
Confidence 35689999999999999999998 99999999986
No 217
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.34 E-value=0.011 Score=60.86 Aligned_cols=31 Identities=29% Similarity=0.472 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 176 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 207 (468)
T 2qae_A 176 TMVVIGGGVIGLELGSVWARLGAEVTVVEFAP 207 (468)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhCCEEEEEecCC
Confidence 58999999999999999998 99999999986
No 218
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.33 E-value=0.0014 Score=70.39 Aligned_cols=34 Identities=24% Similarity=0.396 Sum_probs=31.4
Q ss_pred CcccEEEECCCCchHHHHhhhhc-c--------CeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-N--------FSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g--------~~VlvlE~G~ 85 (523)
...+|+|||||++|+++|++|++ | ++|+|+|+.+
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 35789999999999999999998 8 9999999986
No 219
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.27 E-value=0.012 Score=61.02 Aligned_cols=31 Identities=32% Similarity=0.445 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 176 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 207 (492)
T 3ic9_A 176 SVAVFGPGVIGLELGQALSRLGVIVKVFGRSG 207 (492)
T ss_dssp EEEEESSCHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred eEEEECCCHHHHHHHHHHHHcCCeEEEEEECC
Confidence 59999999999999999999 99999999986
No 220
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.25 E-value=0.0084 Score=61.85 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=29.5
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 216 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP 216 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC
Confidence 369999999999999999999 99999999986
No 221
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.24 E-value=0.013 Score=61.07 Aligned_cols=54 Identities=22% Similarity=0.445 Sum_probs=41.9
Q ss_pred CCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEec-CCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHH
Q 009873 232 KNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKS-DGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLL 303 (523)
Q Consensus 232 ~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~-~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lL 303 (523)
.|+++++++.|++|.-+++ ++++|++.+. +|+ ..++.+ +.||+|+|...++.+|
T Consensus 404 ~gV~v~~~~~v~~i~~~~~------~v~~v~~~~~~~g~---~~~i~~---------D~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDGS------KVVGLEYRDRVSGD---IHSVAL---------AGIFVQIGLLPNTHWL 458 (521)
T ss_dssp TTEEEECSEEEEEEEECSS------SEEEEEEEETTTCC---EEEEEC---------SEEEECCCEEESCGGG
T ss_pred CCcEEEeCCEEEEEEcCCC------cEEEEEEEeCCCCc---eEEEEc---------CEEEECcCCCCCchHH
Confidence 6899999999999986655 8899998873 466 667877 9999999965444433
No 222
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=96.23 E-value=0.016 Score=60.03 Aligned_cols=31 Identities=35% Similarity=0.455 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 200 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 231 (491)
T 3urh_A 200 SMIVVGGGVIGLELGSVWARLGAKVTVVEFLD 231 (491)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEEEEeccc
Confidence 58999999999999999998 99999999886
No 223
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.21 E-value=0.0099 Score=60.91 Aligned_cols=32 Identities=28% Similarity=0.551 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 203 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAG 203 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Confidence 469999999999999999998 99999999985
No 224
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.16 E-value=0.0029 Score=64.62 Aligned_cols=31 Identities=19% Similarity=0.416 Sum_probs=28.3
Q ss_pred EEEECCCCchHHHHhhhhc-c--CeeEEEecCCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-N--FSVLLVERGGS 86 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g--~~VlvlE~G~~ 86 (523)
|||||||++|+++|.+|++ | .+|+|+|+++.
T Consensus 3 VvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~ 36 (437)
T 4eqs_A 3 IVVVGAVAGGATCASQIRRLDKESDIIIFEKDRD 36 (437)
T ss_dssp EEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSC
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCC
Confidence 8999999999999999988 6 68999999863
No 225
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.12 E-value=0.024 Score=54.86 Aligned_cols=53 Identities=13% Similarity=0.276 Sum_probs=40.0
Q ss_pred CCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEe-cCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHH
Q 009873 231 PKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIK-SDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQL 302 (523)
Q Consensus 231 ~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~-~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~l 302 (523)
+.|++++++++|++|..+ + ++.+|++.+ .+|+ ..++.+ +.||+|+|.-.++.+
T Consensus 200 ~~gv~i~~~~~v~~i~~~-~------~v~~v~~~~~~~g~---~~~i~~---------D~vi~a~G~~p~~~~ 253 (325)
T 2q7v_A 200 NPKMKFIWDTAVEEIQGA-D------SVSGVKLRNLKTGE---VSELAT---------DGVFIFIGHVPNTAF 253 (325)
T ss_dssp CTTEEEECSEEEEEEEES-S------SEEEEEEEETTTCC---EEEEEC---------SEEEECSCEEESCGG
T ss_pred cCCceEecCCceEEEccC-C------cEEEEEEEECCCCc---EEEEEc---------CEEEEccCCCCChHH
Confidence 468999999999999864 3 688898875 2466 567776 999999986544444
No 226
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.12 E-value=0.0023 Score=67.67 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=30.5
Q ss_pred ccEEEECCCCchHHHHhhhhc---cCeeEEEecCCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD---NFSVLLVERGGSP 87 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~~~ 87 (523)
.||+|||||++|+++|.+|++ +.+|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 379999999999999999987 5899999999743
No 227
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.12 E-value=0.025 Score=54.98 Aligned_cols=31 Identities=29% Similarity=0.477 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.|+|||+|..|+-+|..|++ +.+|.++++++
T Consensus 154 ~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 154 RVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp EEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 69999999999999999999 89999999875
No 228
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.09 E-value=0.016 Score=59.34 Aligned_cols=31 Identities=26% Similarity=0.302 Sum_probs=28.9
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 169 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 200 (450)
T 1ges_A 169 RVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 200 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 69999999999999999998 99999999885
No 229
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.06 E-value=0.03 Score=54.37 Aligned_cols=56 Identities=11% Similarity=0.207 Sum_probs=41.7
Q ss_pred CCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEec-CCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHH
Q 009873 231 PKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKS-DGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQL 302 (523)
Q Consensus 231 ~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~-~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~l 302 (523)
+.|+++++++.|+++..++++. ++.+|++.+. +|+ ..++.+ +.||+|+|.-.+..+
T Consensus 207 ~~gv~i~~~~~v~~i~~~~~~~----~v~~v~~~~~~~g~---~~~i~~---------D~vi~a~G~~p~~~~ 263 (333)
T 1vdc_A 207 NPKIDVIWNSSVVEAYGDGERD----VLGGLKVKNVVTGD---VSDLKV---------SGLFFAIGHEPATKF 263 (333)
T ss_dssp CTTEEEECSEEEEEEEESSSSS----SEEEEEEEETTTCC---EEEEEC---------SEEEECSCEEESCGG
T ss_pred CCCeeEecCCceEEEeCCCCcc----ceeeEEEEecCCCc---eEEEec---------CEEEEEeCCccchHH
Confidence 5789999999999998765422 5778888753 465 566776 999999997655444
No 230
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.92 E-value=0.0034 Score=63.15 Aligned_cols=58 Identities=5% Similarity=-0.066 Sum_probs=41.4
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG 307 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG 307 (523)
..++.++++++++++..+..+.+. ..|+ ..+|+ ++.+ +.||+++|-- .+.++..||
T Consensus 211 ~l~~~gi~v~~~~~v~~v~~~~~~-------~~v~--~~~g~-----~i~~---------D~vi~~~g~~-~~~~~~~~g 266 (401)
T 3vrd_B 211 GTENALIEWHPGPDAAVVKTDTEA-------MTVE--TSFGE-----TFKA---------AVINLIPPQR-AGKIAQSAS 266 (401)
T ss_dssp TSTTCSEEEECTTTTCEEEEETTT-------TEEE--ETTSC-----EEEC---------SEEEECCCEE-ECHHHHHTT
T ss_pred HHHhcCcEEEeCceEEEEEecccc-------eEEE--cCCCc-----EEEe---------eEEEEecCcC-CchhHhhcc
Confidence 456789999999999998876652 2233 33566 4666 8999988853 456788888
Q ss_pred CC
Q 009873 308 IG 309 (523)
Q Consensus 308 ig 309 (523)
+.
T Consensus 267 l~ 268 (401)
T 3vrd_B 267 LT 268 (401)
T ss_dssp CC
T ss_pred cc
Confidence 74
No 231
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.91 E-value=0.0045 Score=64.03 Aligned_cols=33 Identities=30% Similarity=0.538 Sum_probs=30.2
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.-+++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 219 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERND 219 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 3479999999999999999998 99999999985
No 232
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=95.90 E-value=0.022 Score=58.78 Aligned_cols=55 Identities=15% Similarity=0.239 Sum_probs=38.4
Q ss_pred CCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecC-CCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHH
Q 009873 231 PKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSD-GSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLL 303 (523)
Q Consensus 231 ~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~-g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lL 303 (523)
+.|++|++++.|+++..++++ + ..|++.+.. |+ ..++.+ +.||+|+|---+..+|
T Consensus 239 ~~Gv~i~~~~~v~~i~~~~~~-----~-~~v~~~~~~~~~---~~~~~~---------D~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 239 ERGIPFLRKTVPLSVEKQDDG-----K-LLVKYKNVETGE---ESEDVY---------DTVLWAIGRKGLVDDL 294 (483)
T ss_dssp HTTCCEEETEEEEEEEECTTS-----C-EEEEEEETTTCC---EEEEEE---------SEEEECSCEEECCGGG
T ss_pred hCCCEEEeCCEEEEEEEcCCC-----c-EEEEEecCCCCc---eeEEEc---------CEEEECcccccCcCcC
Confidence 456789999999999876552 3 346666643 44 556777 9999999975444443
No 233
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.89 E-value=0.015 Score=59.52 Aligned_cols=31 Identities=29% Similarity=0.547 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 182 (452)
T 2cdu_A 151 TITIIGSGYIGAELAEAYSNQNYNVNLIDGHE 182 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred eEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 59999999999999999998 99999999986
No 234
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.86 E-value=0.052 Score=55.75 Aligned_cols=31 Identities=29% Similarity=0.425 Sum_probs=28.9
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 180 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 211 (474)
T 1zmd_A 180 KMVVIGAGVIGVELGSVWQRLGADVTAVEFLG 211 (474)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEEEEeccC
Confidence 59999999999999999998 99999999986
No 235
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=95.84 E-value=0.024 Score=58.63 Aligned_cols=54 Identities=9% Similarity=0.108 Sum_probs=37.4
Q ss_pred CCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecC-CCCCceeEEEecCCCCCCCCCcEEEecCCchhHHH
Q 009873 231 PKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSD-GSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQL 302 (523)
Q Consensus 231 ~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~-g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~l 302 (523)
+.|+++++++.|+++...++ ....|++.+.+ |+ ..++.+ +.||+|+|-.-+..+
T Consensus 237 ~~gv~~~~~~~v~~i~~~~~------~~~~v~~~~~~~g~---~~~~~~---------D~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 237 SHGTQFLKGCVPSHIKKLPT------NQLQVTWEDHASGK---EDTGTF---------DTVLWAIGRVPETRT 291 (488)
T ss_dssp HTTCEEEETEEEEEEEECTT------SCEEEEEEETTTTE---EEEEEE---------SEEEECSCEEESCGG
T ss_pred HCCCEEEeCCEEEEEEEcCC------CcEEEEEEeCCCCe---eEEEEC---------CEEEEcccCCcccCc
Confidence 45788999999999987554 23346665533 44 456777 999999997654444
No 236
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.83 E-value=0.018 Score=58.07 Aligned_cols=32 Identities=41% Similarity=0.518 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 178 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQP 178 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 469999999999999999999 99999999986
No 237
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=95.83 E-value=0.023 Score=58.61 Aligned_cols=31 Identities=23% Similarity=0.407 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.|+|+.+
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~ 218 (482)
T 1ojt_A 187 KLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD 218 (482)
T ss_dssp EEEEESCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCeEEEEEECC
Confidence 69999999999999999998 99999999986
No 238
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.79 E-value=0.017 Score=59.56 Aligned_cols=31 Identities=35% Similarity=0.489 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (479)
T 2hqm_A 187 KVVVVGAGYIGIELAGVFHGLGSETHLVIRGE 218 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEeCC
Confidence 58999999999999999988 89999999885
No 239
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=95.78 E-value=0.046 Score=56.04 Aligned_cols=31 Identities=26% Similarity=0.390 Sum_probs=28.9
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 173 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 204 (464)
T 2a8x_A 173 SIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP 204 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 59999999999999999998 99999999986
No 240
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.75 E-value=0.036 Score=58.34 Aligned_cols=31 Identities=29% Similarity=0.450 Sum_probs=29.4
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+.+
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 184 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELAD 184 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 69999999999999999998 99999999986
No 241
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.74 E-value=0.0053 Score=63.77 Aligned_cols=34 Identities=9% Similarity=0.301 Sum_probs=30.8
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++..|||||||.+|+.+|.+|++ +++|+|||+.+
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 34579999999999999999998 89999999986
No 242
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.73 E-value=0.0052 Score=61.53 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=31.0
Q ss_pred CcccEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
++.-|||||+|++|+.+|.+|.. +.+|+|+|+.+.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~ 43 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKY 43 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCC
Confidence 34569999999999999999976 799999999873
No 243
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.71 E-value=0.049 Score=55.82 Aligned_cols=31 Identities=26% Similarity=0.349 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.|+|+.+
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~ 199 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALED 199 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 59999999999999999998 99999999885
No 244
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.69 E-value=0.056 Score=55.26 Aligned_cols=33 Identities=18% Similarity=0.408 Sum_probs=29.5
Q ss_pred cccEEEECCCCchHHHHhhhhc---cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD---NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~ 85 (523)
.-.|+|||+|..|+=+|..|++ +.+|.++++.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~ 262 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRAS 262 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCC
Confidence 3479999999999999999987 58999999986
No 245
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.67 E-value=0.034 Score=57.51 Aligned_cols=31 Identities=29% Similarity=0.409 Sum_probs=29.3
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 196 ~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 227 (490)
T 2bc0_A 196 RVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD 227 (490)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 59999999999999999998 99999999986
No 246
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.64 E-value=0.031 Score=57.42 Aligned_cols=31 Identities=23% Similarity=0.389 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 179 ~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 210 (470)
T 1dxl_A 179 KLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS 210 (470)
T ss_dssp EEEESCCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Confidence 59999999999999999998 99999999986
No 247
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.56 E-value=0.019 Score=59.64 Aligned_cols=31 Identities=29% Similarity=0.513 Sum_probs=27.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 184 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 215 (499)
T 1xdi_A 184 HLIVVGSGVTGAEFVDAYTELGVPVTVVASQD 215 (499)
T ss_dssp SEEEESCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 58899999999999988888 88999998875
No 248
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.50 E-value=0.036 Score=57.46 Aligned_cols=31 Identities=19% Similarity=0.366 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 178 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 209 (500)
T 1onf_A 178 KIGIVGSGYIAVELINVIKRLGIDSYIFARGN 209 (500)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred eEEEECChHHHHHHHHHHHHcCCeEEEEecCC
Confidence 58999999999999999998 89999999876
No 249
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.43 E-value=0.0067 Score=61.73 Aligned_cols=58 Identities=17% Similarity=0.217 Sum_probs=42.5
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG 307 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG 307 (523)
..++.|+++++++.|+++. .+ ++.+.+.+|+ ..++.+ +.||+++|.-. +.++..+|
T Consensus 209 ~l~~~GV~~~~~~~v~~v~--~~---------~~~~~~~~g~---~~~i~~---------d~vi~~~G~~~-~~~~~~~~ 264 (430)
T 3hyw_A 209 LFAERNIDWIANVAVKAIE--PD---------KVIYEDLNGN---THEVPA---------KFTMFMPSFQG-PEVVASAG 264 (430)
T ss_dssp HHHHTTCEEECSCEEEEEC--SS---------EEEEECTTSC---EEEEEC---------SEEEEECEEEC-CHHHHTTC
T ss_pred HHHhCCeEEEeCceEEEEe--CC---------ceEEEeeCCC---ceEeec---------ceEEEeccCCC-chHHHhcc
Confidence 4567899999999999983 33 2455565676 677887 99999999644 46677776
Q ss_pred CC
Q 009873 308 IG 309 (523)
Q Consensus 308 ig 309 (523)
..
T Consensus 265 ~~ 266 (430)
T 3hyw_A 265 DK 266 (430)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 250
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.43 E-value=0.041 Score=56.21 Aligned_cols=31 Identities=23% Similarity=0.245 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 149 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 180 (452)
T 3oc4_A 149 TVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE 180 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEEccC
Confidence 59999999999999999999 99999999986
No 251
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.30 E-value=0.04 Score=56.99 Aligned_cols=31 Identities=26% Similarity=0.405 Sum_probs=27.0
Q ss_pred cEEEECCCCchHHHHhhhhc-----cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-----NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-----g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+.+
T Consensus 182 ~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~ 217 (493)
T 1m6i_A 182 SITIIGGGFLGSELACALGRKARALGTEVIQLFPEK 217 (493)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc
Confidence 59999999999999999875 47899999874
No 252
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.25 E-value=0.042 Score=53.10 Aligned_cols=31 Identities=23% Similarity=0.380 Sum_probs=28.9
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ +.+|.++++++
T Consensus 156 ~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 156 RVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp EEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred EEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 59999999999999999999 89999999875
No 253
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=95.22 E-value=0.086 Score=54.19 Aligned_cols=31 Identities=26% Similarity=0.340 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (478)
T 3dk9_A 189 RSVIVGAGYIAVEMAGILSALGSKTSLMIRHD 220 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC
Confidence 58999999999999999998 89999999875
No 254
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=95.06 E-value=0.08 Score=51.46 Aligned_cols=32 Identities=38% Similarity=0.450 Sum_probs=29.3
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.++|||+|..|+-+|..|++ +.+|.++++++
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 369999999999999999999 89999999875
No 255
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.00 E-value=0.089 Score=54.20 Aligned_cols=32 Identities=28% Similarity=0.540 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 224 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD 224 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC
Confidence 369999999999999999988 89999999885
No 256
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.99 E-value=0.024 Score=58.09 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=28.6
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~ 203 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 368999999999999999988 89999999875
No 257
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.98 E-value=0.14 Score=52.47 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 182 ~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 213 (476)
T 3lad_A 182 KLGVIGAGVIGLELGSVWARLGAEVTVLEAMD 213 (476)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Confidence 59999999999999999998 89999999986
No 258
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.89 E-value=0.078 Score=56.13 Aligned_cols=31 Identities=32% Similarity=0.549 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 189 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 220 (588)
T 3ics_A 189 HATVIGGGFIGVEMVENLRERGIEVTLVEMAN 220 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 59999999999999999999 99999999886
No 259
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.88 E-value=0.042 Score=56.79 Aligned_cols=56 Identities=21% Similarity=0.319 Sum_probs=38.0
Q ss_pred CCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHH-H-HHhhCC
Q 009873 231 PKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQ-L-LLLSGI 308 (523)
Q Consensus 231 ~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~-l-Ll~SGi 308 (523)
+.|++|++++.|++|..+++ ....|++ .+|+ ++.+ +.||+|+|..-+.. | |..+|+
T Consensus 243 ~~GV~i~~~~~v~~i~~~~~------~~~~v~~--~~G~-----~i~~---------D~vv~a~G~~p~~~~L~l~~~gl 300 (490)
T 1fec_A 243 ANGINVRTHENPAKVTKNAD------GTRHVVF--ESGA-----EADY---------DVVMLAIGRVPRSQTLQLEKAGV 300 (490)
T ss_dssp HTTEEEEETCCEEEEEECTT------SCEEEEE--TTSC-----EEEE---------SEEEECSCEEESCTTSCGGGGTC
T ss_pred hCCCEEEeCCEEEEEEEcCC------CEEEEEE--CCCc-----EEEc---------CEEEEccCCCcCccccCchhcCc
Confidence 56789999999999987654 2334544 3464 4676 99999999754443 3 444554
No 260
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.80 E-value=0.045 Score=56.11 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=27.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 178 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 209 (467)
T 1zk7_A 178 RLAVIGSSVVALELAQAFARLGSKVTVLARNT 209 (467)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEEECC
Confidence 58899999999999988888 88999999875
No 261
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=94.77 E-value=0.13 Score=53.55 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=25.3
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
.++|||+|..|+-+|..|++ |.+|.++|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 48888888888888888888 8888888874
No 262
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=94.71 E-value=0.065 Score=54.96 Aligned_cols=31 Identities=19% Similarity=0.382 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 174 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 205 (466)
T 3l8k_A 174 DMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD 205 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC
Confidence 59999999999999999988 89999999875
No 263
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=94.62 E-value=0.1 Score=53.93 Aligned_cols=57 Identities=14% Similarity=0.323 Sum_probs=38.5
Q ss_pred CCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHH-H-HHhhC
Q 009873 230 NPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQ-L-LLLSG 307 (523)
Q Consensus 230 ~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~-l-Ll~SG 307 (523)
++.|++++++++|++|..+++ ....|++ .+|+ ++.+ +.||+|+|..-+.. | |..+|
T Consensus 246 ~~~GV~i~~~~~v~~i~~~~~------~~~~v~~--~~G~-----~i~~---------D~vv~a~G~~p~~~~L~l~~~g 303 (495)
T 2wpf_A 246 TANGIEIMTNENPAKVSLNTD------GSKHVTF--ESGK-----TLDV---------DVVMMAIGRIPRTNDLQLGNVG 303 (495)
T ss_dssp HHTTCEEEESCCEEEEEECTT------SCEEEEE--TTSC-----EEEE---------SEEEECSCEEECCGGGTGGGTT
T ss_pred HhCCCEEEeCCEEEEEEEcCC------ceEEEEE--CCCc-----EEEc---------CEEEECCCCcccccccchhhcC
Confidence 356788999999999987654 3344544 2464 4676 99999999765444 3 34445
Q ss_pred C
Q 009873 308 I 308 (523)
Q Consensus 308 i 308 (523)
+
T Consensus 304 l 304 (495)
T 2wpf_A 304 V 304 (495)
T ss_dssp C
T ss_pred c
Confidence 4
No 264
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=93.97 E-value=0.19 Score=53.21 Aligned_cols=30 Identities=20% Similarity=0.237 Sum_probs=24.8
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
.++|||+|..|+-+|..|++ |.+|.|+|++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 48888888888888888887 7888888876
No 265
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=93.94 E-value=0.19 Score=52.44 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+=.|..++. |.+|.|+++..
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~ 256 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSLGYDVTVAVRSI 256 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEecccc
Confidence 49999999999999999999 99999998753
No 266
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=93.89 E-value=0.26 Score=55.39 Aligned_cols=59 Identities=12% Similarity=0.039 Sum_probs=42.9
Q ss_pred CCCeEEEeccEEEEEEEc-CCCCCCCceeeEEEEEe--c---CCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHH
Q 009873 231 PKNLVVLLNATVNNIIFS-NNGKANESRAHGIRFIK--S---DGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLL 304 (523)
Q Consensus 231 ~~g~~i~~~~~V~~l~~~-~~g~~~~~~v~GV~~~~--~---~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl 304 (523)
+.|++|++++.|++|.-+ ++ ++.+|++.+ . +|+ ..++.+ +.||+|+|-.-+..++.
T Consensus 328 ~~GV~v~~~~~v~~i~~~~~~------~v~~v~~~~~~~~~~~G~---~~~i~~---------D~Vv~a~G~~P~~~l~~ 389 (965)
T 2gag_A 328 ADGVQVISGSVVVDTEADENG------ELSAIVVAELDEARELGG---TQRFEA---------DVLAVAGGFNPVVHLHS 389 (965)
T ss_dssp HTTCCEEETEEEEEEEECTTS------CEEEEEEEEECTTCCEEE---EEEEEC---------SEEEEECCEEECCHHHH
T ss_pred hCCeEEEeCCEeEEEeccCCC------CEEEEEEEeccccCCCCc---eEEEEc---------CEEEECCCcCcChHHHH
Confidence 356778899999999864 33 788888875 2 243 456776 99999999776667766
Q ss_pred hhC
Q 009873 305 LSG 307 (523)
Q Consensus 305 ~SG 307 (523)
..|
T Consensus 390 ~~~ 392 (965)
T 2gag_A 390 QRQ 392 (965)
T ss_dssp HTT
T ss_pred hCC
Confidence 554
No 267
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=93.11 E-value=0.14 Score=57.94 Aligned_cols=31 Identities=35% Similarity=0.425 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
.|+|||+|..|+=+|..|++ |. +|.|+|+.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 79999999999999999988 85 899999875
No 268
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=92.94 E-value=0.17 Score=52.26 Aligned_cols=31 Identities=42% Similarity=0.564 Sum_probs=26.7
Q ss_pred cEEEECCCCchHHHHhhhhc-c--------------CeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-N--------------FSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g--------------~~VlvlE~G~ 85 (523)
.++|||+|+.|+-+|..|++ . .+|.|+|+++
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~ 264 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALP 264 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSS
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccc
Confidence 49999999999999988875 2 5799999986
No 269
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.10 E-value=0.1 Score=43.65 Aligned_cols=31 Identities=23% Similarity=0.439 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||.|..|..+|..|.+ |++|+++|+.+
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 59999999999999999998 99999999875
No 270
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.96 E-value=0.087 Score=44.92 Aligned_cols=32 Identities=25% Similarity=0.382 Sum_probs=29.0
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.|+|||+|..|..+|..|.+ |.+|+++++..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 359999999999999999988 89999999864
No 271
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.89 E-value=0.087 Score=44.02 Aligned_cols=31 Identities=32% Similarity=0.576 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|+|+|..|..+|..|.+ |++|+++|+.+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 49999999999999999998 99999999864
No 272
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=91.82 E-value=0.092 Score=50.39 Aligned_cols=31 Identities=26% Similarity=0.414 Sum_probs=29.4
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 59999999999999999999 99999999986
No 273
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.60 E-value=0.1 Score=43.19 Aligned_cols=31 Identities=29% Similarity=0.505 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|..+|..|++ |.+|.++|+..
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999998 89999999853
No 274
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=91.29 E-value=0.1 Score=52.09 Aligned_cols=32 Identities=22% Similarity=0.260 Sum_probs=30.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
.|+|||+|..|+-+|..|++ |.+|.|+|+.+.
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~ 180 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPASIGIILEY 180 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 69999999999999999999 999999999874
No 275
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.83 E-value=0.13 Score=43.76 Aligned_cols=30 Identities=17% Similarity=0.217 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
.++|+|+|..|..+|..|.+ |.+|+++|+.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 48999999999999999988 9999999986
No 276
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.62 E-value=0.12 Score=52.69 Aligned_cols=31 Identities=32% Similarity=0.461 Sum_probs=29.6
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 173 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 204 (458)
T 1lvl_A 173 HLVVVGGGYIGLELGIAYRKLGAQVSVVEARE 204 (458)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred eEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 69999999999999999999 99999999986
No 277
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=90.30 E-value=0.57 Score=50.46 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=28.7
Q ss_pred cEEEEC--CCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVG--GGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVG--sG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.|+||| +|..|+-+|..|++ |.+|.++|+.+
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~ 558 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA 558 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc
Confidence 499999 99999999999999 99999999875
No 278
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=90.21 E-value=0.16 Score=48.56 Aligned_cols=31 Identities=29% Similarity=0.460 Sum_probs=29.3
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.|+|+..
T Consensus 154 ~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 154 VLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp EEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred eEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 59999999999999999999 99999999875
No 279
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.60 E-value=0.19 Score=40.12 Aligned_cols=31 Identities=32% Similarity=0.472 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
.++|+|+|..|..+|..|.+ | .+|.++++..
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 49999999999999999988 8 8999999864
No 280
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.50 E-value=0.15 Score=50.35 Aligned_cols=32 Identities=38% Similarity=0.711 Sum_probs=29.9
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 176 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 176 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 369999999999999999999 99999999986
No 281
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.22 E-value=0.19 Score=41.71 Aligned_cols=31 Identities=26% Similarity=0.421 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|+|+|..|..+|..|.+ |.+|.++++..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 39999999999999999988 89999999863
No 282
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=87.13 E-value=0.29 Score=47.89 Aligned_cols=31 Identities=26% Similarity=0.468 Sum_probs=27.8
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.|+|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 59999999999999999998 89999999986
No 283
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=86.87 E-value=0.43 Score=45.88 Aligned_cols=31 Identities=26% Similarity=0.308 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+.|||+|..|+..|..|++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 48999999999999999998 89999999864
No 284
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=86.86 E-value=0.4 Score=48.94 Aligned_cols=31 Identities=10% Similarity=0.084 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.|+|||+|..|+=+|..|++ +.+|.++++.+
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred EEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 59999999999999999999 99999999875
No 285
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.70 E-value=0.27 Score=44.43 Aligned_cols=30 Identities=27% Similarity=0.578 Sum_probs=28.1
Q ss_pred EEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
|+|||+|..|..+|..|.+ |++|+++|+.+
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 8999999999999999988 89999999864
No 286
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=86.61 E-value=0.35 Score=49.06 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cCe-eEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFS-VLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~-VlvlE~G~ 85 (523)
.|+|||+|..|+=+|..|++ +.+ |.|+++++
T Consensus 214 ~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 214 SVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp CEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred EEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 69999999999999999999 888 99999985
No 287
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=85.98 E-value=0.41 Score=48.48 Aligned_cols=31 Identities=23% Similarity=0.398 Sum_probs=29.6
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 180 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSD 180 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeec
Confidence 69999999999999999999 99999999986
No 288
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=85.95 E-value=0.41 Score=46.20 Aligned_cols=31 Identities=29% Similarity=0.488 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+.|||+|..|+..|..|++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 48999999999999999999 89999999864
No 289
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=85.80 E-value=0.78 Score=43.62 Aligned_cols=31 Identities=6% Similarity=0.243 Sum_probs=23.1
Q ss_pred cEEEECCCCc-hHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTT-GCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~a-G~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|.. +.-+|..+.. +.+|++++++.
T Consensus 148 ~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 148 PLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred ceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 5788888865 5567777777 78999988764
No 290
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=85.72 E-value=0.37 Score=46.35 Aligned_cols=31 Identities=29% Similarity=0.459 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|.|||+|..|...|..++. |++|+|+|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 48999999999999999998 99999999753
No 291
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=85.41 E-value=0.44 Score=48.33 Aligned_cols=31 Identities=26% Similarity=0.602 Sum_probs=29.6
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 181 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE 181 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 79999999999999999998 99999999986
No 292
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=85.36 E-value=0.49 Score=49.42 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=30.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
.|+|||+|..|+-+|..|++ +.+|.|+++.+.
T Consensus 187 rV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 187 RVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp EEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred eEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 59999999999999999999 899999999974
No 293
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=85.07 E-value=0.51 Score=49.20 Aligned_cols=32 Identities=22% Similarity=0.258 Sum_probs=30.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
.|+|||+|..|+-+|..|++ +.+|.|+++.+.
T Consensus 180 rV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 180 RVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred eEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 59999999999999999999 899999999974
No 294
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=84.80 E-value=0.48 Score=47.47 Aligned_cols=32 Identities=38% Similarity=0.726 Sum_probs=29.9
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.++|||+|..|+-+|..|++ |.+|.++|+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~ 176 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGD 176 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 369999999999999999998 99999999986
No 295
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=84.41 E-value=0.54 Score=49.15 Aligned_cols=32 Identities=16% Similarity=0.359 Sum_probs=30.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
.|+|||+|..|+-+|..|++ +.+|.|++|.+.
T Consensus 193 rV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 193 RVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp EEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred EEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 59999999999999999999 899999999973
No 296
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.24 E-value=0.48 Score=48.33 Aligned_cols=31 Identities=32% Similarity=0.628 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-+||+|+|-.|..+|..|++ |++|+|||+.+
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 39999999999999999987 99999999875
No 297
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=84.06 E-value=0.6 Score=42.38 Aligned_cols=30 Identities=23% Similarity=0.338 Sum_probs=27.6
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
-|+|||+|-.|...|..|.+ |.+|.|++..
T Consensus 33 ~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 33 SVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 59999999999999999998 9999999864
No 298
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=84.05 E-value=0.48 Score=45.10 Aligned_cols=31 Identities=23% Similarity=0.356 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+.|||+|..|+..|..|++ |.+|.++.|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 48999999999999999998 89999999874
No 299
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=83.89 E-value=0.59 Score=39.02 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=27.8
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-+.|||+|..|..+|..|.+ |.+|.+.++..
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 49999999999999999988 88899998864
No 300
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=83.86 E-value=0.45 Score=44.66 Aligned_cols=30 Identities=23% Similarity=0.390 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
-|+|||+|-.|...|..|.+ |++|+|++..
T Consensus 15 ~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 15 RILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp EEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 49999999999999999999 9999999875
No 301
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=83.76 E-value=0.63 Score=44.42 Aligned_cols=31 Identities=29% Similarity=0.537 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|.|||+|..|..+|..|++ |++|+++++..
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 39999999999999999998 89999999864
No 302
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=83.58 E-value=0.57 Score=44.27 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|.|||+|..|..+|..|++ |++|++.++..
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 38999999999999999998 99999999864
No 303
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=83.52 E-value=0.62 Score=40.64 Aligned_cols=31 Identities=19% Similarity=0.185 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHHhhhhc--cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD--NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae--g~~VlvlE~G~ 85 (523)
.++|||.|..|..+|..|.+ |.+|+++|+..
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 59999999999999999975 79999999864
No 304
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=83.27 E-value=0.62 Score=43.16 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
..|+|||+|..|+.+|..|+. | .++.|+++..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 469999999999999999999 8 4899999875
No 305
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=82.72 E-value=0.6 Score=45.33 Aligned_cols=30 Identities=30% Similarity=0.452 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
-+.|||+|..|+..|..|++ |.+|.++.+.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 48999999999999999999 8999999985
No 306
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=82.64 E-value=0.75 Score=43.95 Aligned_cols=31 Identities=26% Similarity=0.440 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|||+|..|+-+|..|++ +.+|.++++.+
T Consensus 157 ~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 157 RVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp EEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 59999999999999999999 89999999976
No 307
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=82.48 E-value=0.73 Score=43.40 Aligned_cols=30 Identities=23% Similarity=0.141 Sum_probs=28.0
Q ss_pred EEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+.|||+|..|...|..|++ |++|.++++..
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 7899999999999999998 89999999875
No 308
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=82.26 E-value=0.84 Score=46.34 Aligned_cols=48 Identities=8% Similarity=0.136 Sum_probs=38.2
Q ss_pred hhCCCCCeEEEeccEEEEEEEc--CCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCc
Q 009873 227 EAGNPKNLVVLLNATVNNIIFS--NNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGAL 297 (523)
Q Consensus 227 ~~~~~~g~~i~~~~~V~~l~~~--~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~ 297 (523)
..+++.|++|++++.|++|..+ ++ ++++|.. +|+ ++.+ +.||+|+|.+
T Consensus 250 ~~~~~~G~~i~~~~~V~~i~~~~~~~------~~~~V~~---~g~-----~~~a---------d~VV~a~~~~ 299 (453)
T 2bcg_G 250 RLSAIYGGTYMLDTPIDEVLYKKDTG------KFEGVKT---KLG-----TFKA---------PLVIADPTYF 299 (453)
T ss_dssp HHHHHTTCEEECSCCCCEEEEETTTT------EEEEEEE---TTE-----EEEC---------SCEEECGGGC
T ss_pred HHHHHcCCEEECCCEEEEEEEECCCC------eEEEEEE---CCe-----EEEC---------CEEEECCCcc
Confidence 3556679999999999999988 55 8888875 344 3666 9999999986
No 309
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=82.24 E-value=0.77 Score=44.04 Aligned_cols=54 Identities=7% Similarity=0.145 Sum_probs=41.3
Q ss_pred CCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEec-CCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHH
Q 009873 231 PKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKS-DGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQL 302 (523)
Q Consensus 231 ~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~-~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~l 302 (523)
..|+++++++.|++|..+++ ++.+|++.+. +|+ ..++.+ +.||+|+|...++.+
T Consensus 221 ~~gv~i~~~~~v~~i~~~~~------~~~~v~~~~~~~g~---~~~i~~---------D~vi~a~G~~p~~~~ 275 (338)
T 3itj_A 221 NEKIEILYNTVALEAKGDGK------LLNALRIKNTKKNE---ETDLPV---------SGLFYAIGHTPATKI 275 (338)
T ss_dssp CTTEEEECSEEEEEEEESSS------SEEEEEEEETTTTE---EEEEEC---------SEEEECSCEEECCGG
T ss_pred cCCeEEeecceeEEEEcccC------cEEEEEEEECCCCc---eEEEEe---------CEEEEEeCCCCChhH
Confidence 35789999999999988765 7889998873 344 456776 999999997544443
No 310
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=82.14 E-value=0.81 Score=41.05 Aligned_cols=32 Identities=13% Similarity=0.248 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.+.|||+|..|...|..|++ |.+|.++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 359999999999999999998 89999998865
No 311
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=81.90 E-value=0.77 Score=45.93 Aligned_cols=34 Identities=32% Similarity=0.414 Sum_probs=30.6
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSP 87 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~ 87 (523)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 359999999999999999998 9999999998743
No 312
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=81.68 E-value=0.76 Score=45.84 Aligned_cols=33 Identities=30% Similarity=0.365 Sum_probs=30.1
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
-.++|||+|..|+-+|..|++ |.+|.++|+.+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~ 176 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPR 176 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 359999999999999999998 999999999873
No 313
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=81.28 E-value=1.1 Score=43.47 Aligned_cols=33 Identities=24% Similarity=0.528 Sum_probs=29.4
Q ss_pred cccEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
..-|+|||+|..|+.+|..|+. | .++.|++...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 3459999999999999999999 8 6899999875
No 314
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=81.23 E-value=0.82 Score=43.94 Aligned_cols=31 Identities=23% Similarity=0.443 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cC--eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF--SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G~ 85 (523)
-|.|||+|..|..+|..|++ |+ +|.++++..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 49999999999999999998 77 999999864
No 315
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=81.12 E-value=1.2 Score=41.68 Aligned_cols=31 Identities=16% Similarity=0.081 Sum_probs=28.6
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.++|||+|..|+-+|..|++ | +|.+++++.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 369999999999999999999 8 999999885
No 316
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=80.43 E-value=0.86 Score=43.46 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-+.|||+|..|...|..|++ |++|.++++..
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 48999999999999999998 89999998753
No 317
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=80.27 E-value=1.3 Score=41.10 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=28.9
Q ss_pred cccEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
..-|+|||+|..|+.+|..|+. | .++.|++...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3469999999999999999999 8 5899998764
No 318
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=80.13 E-value=0.95 Score=44.54 Aligned_cols=32 Identities=28% Similarity=0.505 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
.-|||+|+|.+|..+|.-|.. |. +|.++|+..
T Consensus 189 ~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 189 VSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred cEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 459999999999999999888 86 999999975
No 319
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=80.09 E-value=0.87 Score=45.61 Aligned_cols=31 Identities=16% Similarity=0.239 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.|||||.|-.|..+|..|.+ |.+|++||+.+
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 59999999999999999988 99999999875
No 320
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=79.98 E-value=0.88 Score=46.57 Aligned_cols=32 Identities=22% Similarity=0.470 Sum_probs=29.1
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.-+.|||+|..|+..|..|++ |++|+++++..
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 458999999999999999999 89999999864
No 321
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=79.24 E-value=1.1 Score=44.53 Aligned_cols=32 Identities=22% Similarity=0.202 Sum_probs=29.0
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
--|+|||+|..|..+|..|.. |.+|+++++..
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 459999999999999999887 99999999875
No 322
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=79.09 E-value=1.3 Score=44.83 Aligned_cols=30 Identities=27% Similarity=0.300 Sum_probs=27.7
Q ss_pred EEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+.|||+|..|+..|..|++ |++|+++++..
T Consensus 3 I~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7899999999999999999 89999998754
No 323
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=78.99 E-value=1 Score=43.38 Aligned_cols=29 Identities=24% Similarity=0.575 Sum_probs=26.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
.+.|||+|..|+..|..|++ |.+|.++ +.
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 48999999999999999999 8999999 54
No 324
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=78.89 E-value=1.5 Score=44.54 Aligned_cols=31 Identities=19% Similarity=0.187 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|.|||.|.+|+++|..|.+ |++|.+.|+..
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 48999999999999999988 99999999875
No 325
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=78.69 E-value=1.2 Score=42.63 Aligned_cols=31 Identities=32% Similarity=0.361 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHHhhhhccCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSDNFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Laeg~~VlvlE~G~ 85 (523)
.+.|||+|..|+..|..|+.|.+|.++.|..
T Consensus 4 kI~IiGaGa~G~~~a~~L~~g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhcCCceEEEECCH
Confidence 4899999999999999999668999999874
No 326
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=78.59 E-value=1.1 Score=42.44 Aligned_cols=34 Identities=29% Similarity=0.331 Sum_probs=30.7
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGSP 87 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~~ 87 (523)
-.++|||+|..|+-+|..|++ +.+|.++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTF 189 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCC
Confidence 469999999999999999999 9999999998743
No 327
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=78.57 E-value=1.1 Score=43.91 Aligned_cols=33 Identities=30% Similarity=0.483 Sum_probs=29.1
Q ss_pred cccEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
+.-|+|+|+|.+|..+|..|.. |. +|.|+++.+
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 3459999999999999999988 85 899999974
No 328
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=78.38 E-value=1 Score=43.29 Aligned_cols=31 Identities=29% Similarity=0.459 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|.|||+|..|...|..|++ |++|.+.++.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 38899999999999999998 89999999864
No 329
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=78.33 E-value=1.1 Score=41.92 Aligned_cols=31 Identities=16% Similarity=0.292 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-++|+|+|..|..+|..|++ |.+|.++.|..
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 49999999999999999998 89999998763
No 330
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=78.33 E-value=1.1 Score=44.12 Aligned_cols=32 Identities=19% Similarity=0.106 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
--|+|||+|..|..+|..|.. |.+|+++++..
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 359999999999999999988 99999999875
No 331
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=78.26 E-value=1.1 Score=43.23 Aligned_cols=28 Identities=25% Similarity=0.401 Sum_probs=26.7
Q ss_pred EEEECCCCchHHHHhhhhc-cCeeEEEec
Q 009873 56 YIVVGGGTTGCPLAATLSD-NFSVLLVER 83 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~~VlvlE~ 83 (523)
+.|||+|..|...|..|++ |++|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 7899999999999999998 899999998
No 332
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=78.14 E-value=1.1 Score=42.33 Aligned_cols=34 Identities=26% Similarity=0.393 Sum_probs=29.9
Q ss_pred CcccEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 52 KSFDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 52 ~~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
...-|+|||+|..|+.+|..|+. | -++.|+|...
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 34579999999999999999999 8 6899998764
No 333
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=77.57 E-value=1.2 Score=45.31 Aligned_cols=31 Identities=32% Similarity=0.380 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|.|||+|..|..+|..|++ |++|+++|+..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999998 89999998864
No 334
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=77.40 E-value=2.5 Score=44.80 Aligned_cols=49 Identities=8% Similarity=0.087 Sum_probs=37.6
Q ss_pred hhCCCCCeEEEeccEEEEEEEcCC-CCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCC
Q 009873 227 EAGNPKNLVVLLNATVNNIIFSNN-GKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGA 296 (523)
Q Consensus 227 ~~~~~~g~~i~~~~~V~~l~~~~~-g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa 296 (523)
+.++..|.+|++++.|.+|+.+++ + +++||. ..+|+ ++.+ +.||..+..
T Consensus 386 r~~~~~Gg~i~l~~~V~~I~~~~~~g-----~v~gV~--~~~Ge-----~i~A---------~~VVs~~~~ 435 (650)
T 1vg0_A 386 RMCAVFGGIYCLRHSVQCLVVDKESR-----KCKAVI--DQFGQ-----RIIS---------KHFIIEDSY 435 (650)
T ss_dssp HHHHHTTCEEESSCCEEEEEEETTTC-----CEEEEE--ETTSC-----EEEC---------SEEEEEGGG
T ss_pred HHHHHcCCEEEeCCEeeEEEEeCCCC-----eEEEEE--eCCCC-----EEEc---------CEEEEChhh
Confidence 466788999999999999999873 2 899987 33576 3666 888875553
No 335
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=77.33 E-value=1 Score=41.00 Aligned_cols=30 Identities=13% Similarity=0.193 Sum_probs=27.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.++|+|+|-.|..+|..|.+ |. |+++|+.+
T Consensus 11 ~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 11 HVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp EEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred EEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 49999999999999999988 89 99999864
No 336
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=77.01 E-value=1.2 Score=43.30 Aligned_cols=31 Identities=35% Similarity=0.394 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+.|||+|..|...|..|++ |.+|.++++..
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 59999999999999999998 89999998753
No 337
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=76.72 E-value=1.5 Score=42.35 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=28.6
Q ss_pred ccEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
.-|.|||+|..|..+|..|+. |+ +|.++|+..
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 359999999999999999998 76 999999864
No 338
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=76.66 E-value=1.5 Score=39.04 Aligned_cols=30 Identities=23% Similarity=0.360 Sum_probs=27.4
Q ss_pred EEEEC-CCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVG-GGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVG-sG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+.||| +|..|..+|..|++ |.+|.++++..
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 78999 99999999999998 89999998863
No 339
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=76.59 E-value=2 Score=43.56 Aligned_cols=31 Identities=29% Similarity=0.499 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|.|||+|..|..+|..|++ |++|++.|+..
T Consensus 56 kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 49999999999999999999 99999999875
No 340
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=76.59 E-value=1.3 Score=45.01 Aligned_cols=31 Identities=29% Similarity=0.296 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-++|+|+|..|..+|.+|+. |.+|++.|+.+
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 38999999999999999998 99999998753
No 341
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=76.27 E-value=1.3 Score=44.85 Aligned_cols=31 Identities=26% Similarity=0.321 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+.|||+|..|+..|..|++ |++|+++++..
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 48899999999999999999 89999999864
No 342
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=76.15 E-value=1.4 Score=42.09 Aligned_cols=30 Identities=33% Similarity=0.356 Sum_probs=27.2
Q ss_pred EEEECCCCchHHHHhhhhc-cC--eeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NF--SVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G~ 85 (523)
|.|||+|..|.++|..|+. |+ +|.++|+..
T Consensus 3 I~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 7899999999999999998 77 899999863
No 343
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=75.93 E-value=1.5 Score=43.11 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|+|+|+|.+|..+|..|.. |.+|+++++..
T Consensus 169 ~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 169 KVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 59999999999999999988 89999999864
No 344
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=75.89 E-value=1.5 Score=43.25 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|+|+|+|..|..+|..|.. |.+|+++++..
T Consensus 168 ~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 168 SVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999988 99999999864
No 345
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=75.75 E-value=1.4 Score=42.59 Aligned_cols=32 Identities=28% Similarity=0.476 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.-+.|||+|..|+..|..|++ |.+|.++.+..
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 459999999999999999998 89999998853
No 346
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=75.61 E-value=1.6 Score=41.30 Aligned_cols=33 Identities=27% Similarity=0.379 Sum_probs=30.0
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
-.++|||+|..|+-+|..|++ +.+|.++++++.
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 359999999999999999999 899999999863
No 347
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=75.17 E-value=1.7 Score=41.91 Aligned_cols=31 Identities=19% Similarity=0.457 Sum_probs=27.9
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.|+|||+|..|+-+|..|++ + +|.++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 369999999999999999999 6 799999884
No 348
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=75.15 E-value=1.6 Score=40.82 Aligned_cols=31 Identities=23% Similarity=0.486 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-++|+|+|.+|..+|..|++ |.+|.|+.|..
T Consensus 120 ~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 120 NALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999998 99999998874
No 349
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=75.11 E-value=1.5 Score=43.70 Aligned_cols=31 Identities=16% Similarity=0.257 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|+|||+|.+|..+|..|.. |.+|+++++..
T Consensus 174 ~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 174 KVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 59999999999999999887 99999999864
No 350
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=75.09 E-value=1.4 Score=43.25 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.|.|||+|..|...|..|++ |++|.++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999998 89999998763
No 351
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=74.94 E-value=1.6 Score=42.80 Aligned_cols=32 Identities=25% Similarity=0.306 Sum_probs=29.1
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.+.|||+|..|.+.|..|++ |++|.+.++.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 359999999999999999999 89999998864
No 352
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=74.93 E-value=1.9 Score=41.37 Aligned_cols=31 Identities=26% Similarity=0.462 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
-|.|||+|..|..+|..|+. |+ +|.++++..
T Consensus 6 kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 6 KIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 48999999999999999998 87 999999864
No 353
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=74.86 E-value=0.96 Score=45.61 Aligned_cols=47 Identities=21% Similarity=0.308 Sum_probs=37.7
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCc
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGAL 297 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~ 297 (523)
.+++.|++|++++.|++|..+++ ++++|.. +|+ ++.+ +.||+|+|..
T Consensus 243 ~~~~~G~~i~~~~~V~~I~~~~~------~v~~v~~---~g~-----~~~a---------d~VV~a~~~~ 289 (433)
T 1d5t_A 243 LSAIYGGTYMLNKPVDDIIMENG------KVVGVKS---EGE-----VARC---------KQLICDPSYV 289 (433)
T ss_dssp HHHHHTCCCBCSCCCCEEEEETT------EEEEEEE---TTE-----EEEC---------SEEEECGGGC
T ss_pred HHHHcCCEEECCCEEEEEEEeCC------EEEEEEE---CCe-----EEEC---------CEEEECCCCC
Confidence 45567899999999999998876 8888763 354 3676 9999999976
No 354
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=74.79 E-value=1.7 Score=44.14 Aligned_cols=54 Identities=24% Similarity=0.369 Sum_probs=37.8
Q ss_pred CCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEec-------------CCCCCceeEEEecCCCCCCCCCcEEEecCCc
Q 009873 231 PKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKS-------------DGSSNHMHEAYLNKPGNSSTWGDVILSAGAL 297 (523)
Q Consensus 231 ~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~-------------~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~ 297 (523)
+.|+++++++.+++|.-++++. ++.+|++.+. +|+ ..++.+ +.||+|+|.-
T Consensus 269 ~~gv~~~~~~~~~~i~~~~~~~----~v~~v~~~~~~l~~~~~~~~~~~~g~---~~~i~~---------d~Vi~a~G~~ 332 (460)
T 1cjc_A 269 SRAWGLRFFRSPQQVLPSPDGR----RAAGIRLAVTRLEGIGEATRAVPTGD---VEDLPC---------GLVLSSIGYK 332 (460)
T ss_dssp SEEEEEECSEEEEEEEECTTSS----SEEEEEEEEEEEESSGGGCEEEEEEE---EEEEEC---------SEEEECCCEE
T ss_pred CceEEEECCCChheEEcCCCCc----eEEEEEEEEEEEccccCCCcccCCCc---eEEEEc---------CEEEECCCCC
Confidence 4789999999999997653221 5777776531 243 456776 9999999976
Q ss_pred hhH
Q 009873 298 GSP 300 (523)
Q Consensus 298 ~tp 300 (523)
.++
T Consensus 333 p~~ 335 (460)
T 1cjc_A 333 SRP 335 (460)
T ss_dssp CCC
T ss_pred CCC
Confidence 555
No 355
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=74.74 E-value=1.7 Score=42.43 Aligned_cols=33 Identities=15% Similarity=0.377 Sum_probs=29.3
Q ss_pred cccEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
..-|+|||+|..|+.+|..|+. | .++.|++...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 4569999999999999999999 8 6899999764
No 356
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=74.68 E-value=1.7 Score=39.10 Aligned_cols=31 Identities=26% Similarity=0.374 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-+.|||+|..|...|..|++ |++|.++++..
T Consensus 30 ~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 30 KVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999988 89999998864
No 357
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=74.61 E-value=2.2 Score=44.49 Aligned_cols=32 Identities=25% Similarity=0.535 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
.-|+|||+|..|+.+|..|+. | .++.|+|...
T Consensus 328 ~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 328 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 459999999999999999999 8 6899999775
No 358
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=74.52 E-value=2.3 Score=40.26 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=29.3
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.+.|||.|..|...|..|++ |++|.+.++..
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 359999999999999999999 89999999875
No 359
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=74.42 E-value=1.6 Score=45.48 Aligned_cols=32 Identities=25% Similarity=0.535 Sum_probs=29.0
Q ss_pred ccEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
.-|+|||+|..|+.+|..|+. | .++.|++...
T Consensus 327 arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 327 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 459999999999999999999 8 6899999875
No 360
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=74.40 E-value=1.3 Score=44.66 Aligned_cols=30 Identities=13% Similarity=0.211 Sum_probs=28.0
Q ss_pred EEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
|.|||.|.+|+++|..|++ |++|.+.|...
T Consensus 8 v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~ 38 (439)
T 2x5o_A 8 VVIIGLGLTGLSCVDFFLARGVTPRVMDTRM 38 (439)
T ss_dssp EEEECCHHHHHHHHHHHHTTTCCCEEEESSS
T ss_pred EEEEeecHHHHHHHHHHHhCCCEEEEEECCC
Confidence 8999999999999988888 99999999875
No 361
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=74.34 E-value=1.6 Score=44.41 Aligned_cols=31 Identities=29% Similarity=0.313 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
.|+|||+|..|+=+|..|.+ |. +|.++++.+
T Consensus 266 ~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 266 HVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred EEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 59999999999999999887 75 699999986
No 362
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=73.56 E-value=1.9 Score=39.59 Aligned_cols=32 Identities=31% Similarity=0.482 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
--+.|||+|..|..+|..|++ |++|++.++..
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 348999999999999999998 89999999864
No 363
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=73.56 E-value=1.8 Score=41.87 Aligned_cols=31 Identities=19% Similarity=0.411 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
-|.|||+|..|..+|..|+. |+ +|.++|...
T Consensus 16 kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 59999999999999999998 77 999999864
No 364
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=73.39 E-value=2.6 Score=40.50 Aligned_cols=32 Identities=22% Similarity=0.456 Sum_probs=29.0
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.|.|||.|..|...|..|++ |++|.+.++..
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 359999999999999999998 89999998864
No 365
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=73.25 E-value=1.9 Score=42.62 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|+|||+|..|..+|..|.. |.+|+++++..
T Consensus 170 ~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 170 DVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 49999999999999999988 99999999764
No 366
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=73.18 E-value=2 Score=40.88 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
.++|+|+|.+|..+|..|++ |. +|.|..|..
T Consensus 143 ~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 143 RILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred EEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 49999999999999999998 86 999998763
No 367
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=73.17 E-value=2.3 Score=40.06 Aligned_cols=31 Identities=35% Similarity=0.532 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.|.|||.|..|...|..|++ |++|.+.++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 37899999999999999999 99999998864
No 368
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=73.16 E-value=2.4 Score=40.22 Aligned_cols=31 Identities=19% Similarity=0.369 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|.|||.|..|...|..|++ |++|.+.++..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 48899999999999999999 89999998864
No 369
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=72.90 E-value=2 Score=42.87 Aligned_cols=30 Identities=30% Similarity=0.281 Sum_probs=27.6
Q ss_pred EEEECCCCchHHHHhhhhccCeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSDNFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Laeg~~VlvlE~G~ 85 (523)
+.|||.|..|+..|..|++|++|+++++..
T Consensus 3 I~VIG~G~vG~~~A~~La~G~~V~~~d~~~ 32 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSLQNEVTIVDILP 32 (402)
T ss_dssp EEEECCSHHHHHHHHHHTTTSEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHhCCCEEEEEECCH
Confidence 789999999999999999999999998864
No 370
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=72.90 E-value=1.4 Score=41.25 Aligned_cols=31 Identities=16% Similarity=0.263 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-++|+|+|.+|..+|..|++ |.+|.|..|..
T Consensus 121 ~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 121 HVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp EEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 49999999999999999998 89999998863
No 371
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=72.83 E-value=2 Score=46.51 Aligned_cols=31 Identities=16% Similarity=0.129 Sum_probs=29.0
Q ss_pred cEEEEC--CCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVG--GGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVG--sG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.|+||| +|..|+-+|..|++ |.+|.|+|+++
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred eEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 599998 99999999999999 99999999986
No 372
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=72.72 E-value=1.9 Score=41.45 Aligned_cols=30 Identities=27% Similarity=0.369 Sum_probs=27.3
Q ss_pred EEEECCCCchHHHHhhhhc-cC--eeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NF--SVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G~ 85 (523)
+.|||+|..|..+|..|++ |+ +|.++++..
T Consensus 3 I~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 7899999999999999998 87 999999863
No 373
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=72.70 E-value=2.1 Score=43.00 Aligned_cols=33 Identities=18% Similarity=0.101 Sum_probs=29.6
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
...+.|||.|..|+++|..||+ |++|+.+|...
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4579999999999999999998 99999998754
No 374
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=72.67 E-value=2 Score=40.54 Aligned_cols=29 Identities=21% Similarity=0.504 Sum_probs=26.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
-++|+|+|..|..+|..|++ | +|.+..|.
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 39999999999999999998 9 99999875
No 375
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=72.57 E-value=2.1 Score=43.00 Aligned_cols=31 Identities=29% Similarity=0.375 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
..-|||.|..|+..|..|++ |++|+++++..
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 47899999999999999999 89999999875
No 376
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=72.56 E-value=2.7 Score=39.58 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=27.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
.++|+|+|.+|..+|..|++ |. +|.|+.|-.
T Consensus 124 ~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 124 ICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp EEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred EEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 59999999999999999998 86 899998763
No 377
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=72.36 E-value=2.1 Score=43.03 Aligned_cols=31 Identities=16% Similarity=0.258 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHhhhhccCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSDNFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Laeg~~VlvlE~G~ 85 (523)
.+.|||.|..|+..|..|++|++|+++++..
T Consensus 38 kIaVIGlG~mG~~lA~~La~G~~V~~~D~~~ 68 (432)
T 3pid_A 38 KITISGTGYVGLSNGVLIAQNHEVVALDIVQ 68 (432)
T ss_dssp EEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHcCCeEEEEecCH
Confidence 5999999999999999999999999999864
No 378
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=72.34 E-value=2.1 Score=42.42 Aligned_cols=32 Identities=22% Similarity=0.229 Sum_probs=28.3
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.|+|+|+|..|..+|..|.. |.+|++.++..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 359999999999999998877 98999999864
No 379
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=71.99 E-value=2.2 Score=40.50 Aligned_cols=31 Identities=23% Similarity=0.467 Sum_probs=28.1
Q ss_pred cEEEEC-CCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVG-GGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVG-sG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-+.||| .|..|.+.|..|++ |++|.++++..
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 499999 99999999999998 89999998754
No 380
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=71.92 E-value=1.9 Score=44.16 Aligned_cols=31 Identities=29% Similarity=0.465 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|.|||+|..|..+|..|++ |++|++.|+..
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 38899999999999999998 99999999864
No 381
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=71.31 E-value=2.3 Score=40.78 Aligned_cols=30 Identities=10% Similarity=0.266 Sum_probs=27.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G 84 (523)
-++|+|+|.+|..+|..|++ |. +|.|+.|.
T Consensus 156 ~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 156 KMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred EEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 49999999999999999998 86 89999886
No 382
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=71.21 E-value=2.3 Score=39.39 Aligned_cols=30 Identities=17% Similarity=0.170 Sum_probs=26.9
Q ss_pred EEEECC-C-CchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGG-G-TTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGs-G-~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++|.|+ | ..|..+|.+|++ |.+|+++.+..
T Consensus 25 vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 25 VLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp EEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 899998 7 699999999998 99999998764
No 383
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=71.15 E-value=2.2 Score=40.76 Aligned_cols=30 Identities=17% Similarity=0.288 Sum_probs=27.3
Q ss_pred EEEECCCCchHHHHhhhhc-c--CeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-N--FSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g--~~VlvlE~G~ 85 (523)
+.|||+|..|..+|..|++ | .+|.++++..
T Consensus 4 I~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 4 IGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 8899999999999999998 7 6899999863
No 384
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=71.13 E-value=2.2 Score=40.60 Aligned_cols=31 Identities=19% Similarity=0.133 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+.|||.|..|...|..|++ |++|.+.++..
T Consensus 9 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 9 HVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 58999999999999999999 89999998764
No 385
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=71.00 E-value=2.2 Score=40.75 Aligned_cols=31 Identities=23% Similarity=0.278 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.|.|||.|..|...|..|++ |++|.+.++..
T Consensus 23 ~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 23 EVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 59999999999999999999 89999998864
No 386
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=70.96 E-value=2.2 Score=40.13 Aligned_cols=31 Identities=26% Similarity=0.390 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-+.|||.|..|...|..|++ |++|.+.++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 37899999999999999999 89999998864
No 387
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=70.77 E-value=2 Score=41.84 Aligned_cols=31 Identities=19% Similarity=0.219 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHhhhhc-c-------CeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-N-------FSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g-------~~VlvlE~G~ 85 (523)
-|.|||+|..|...|..|++ | .+|.++++..
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 49999999999999999998 8 8999999875
No 388
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=70.76 E-value=2.3 Score=42.88 Aligned_cols=33 Identities=27% Similarity=0.420 Sum_probs=30.3
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+.-+-|||.|..|+..|..|++ |++|+++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~ 41 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDA 41 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4568999999999999999999 89999999875
No 389
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=70.76 E-value=2.1 Score=42.17 Aligned_cols=31 Identities=13% Similarity=0.213 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHhhhhc-c-------CeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-N-------FSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g-------~~VlvlE~G~ 85 (523)
-|.|||+|..|+..|..|++ | .+|.++++..
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECCh
Confidence 49999999999999999998 8 8999999875
No 390
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=70.75 E-value=1.7 Score=39.54 Aligned_cols=29 Identities=14% Similarity=0.224 Sum_probs=26.9
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEec
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVER 83 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~ 83 (523)
.+.|||.|..|.+.|..|++ |++|.++.+
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 48999999999999999998 899999877
No 391
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=70.71 E-value=2.3 Score=40.08 Aligned_cols=31 Identities=19% Similarity=0.323 Sum_probs=27.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
-++|+|+|.+|..+|..|++ |. +|.|+.|..
T Consensus 129 ~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 129 SVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 49999999999999999998 86 799997763
No 392
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=70.70 E-value=2.5 Score=42.44 Aligned_cols=33 Identities=21% Similarity=0.464 Sum_probs=29.2
Q ss_pred cccEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
..-|+|||+|..|+.+|..|+. | .++.|+|...
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 4579999999999999999998 8 6899998764
No 393
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=70.47 E-value=3 Score=39.38 Aligned_cols=31 Identities=23% Similarity=0.450 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+.|||+|..|...|..|++ |.+|.++++..
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 48999999999999999998 89999998763
No 394
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=70.21 E-value=2.5 Score=40.04 Aligned_cols=31 Identities=23% Similarity=0.313 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-+.|||.|..|..+|..|.. |.+|++.++..
T Consensus 157 ~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 157 NVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999988 99999999864
No 395
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=70.13 E-value=2.3 Score=41.37 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=29.0
Q ss_pred cccEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
...|+|||+|..|+.+|..|+. | .++.|+|-..
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 3569999999999999999999 8 5899998664
No 396
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=70.06 E-value=2.6 Score=40.29 Aligned_cols=30 Identities=23% Similarity=0.398 Sum_probs=27.2
Q ss_pred EEEECCCCchHHHHhhhhc---cCeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD---NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae---g~~VlvlE~G~ 85 (523)
|.|||+|..|..+|..|++ +.+|.++|+..
T Consensus 3 I~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 3 ITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 7899999999999999987 58999999864
No 397
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=70.05 E-value=2.4 Score=40.64 Aligned_cols=30 Identities=33% Similarity=0.484 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G 84 (523)
-|.|||+|..|..+|..|+. |+ +|.++|..
T Consensus 10 kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 10 KVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 49999999999999999998 78 99999986
No 398
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=69.99 E-value=2.3 Score=39.95 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
-++|+|+|.+|..+|..|++ |. +|.|+.|..
T Consensus 119 ~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 119 YILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred EEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 49999999999999999998 86 899998764
No 399
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=69.98 E-value=2.6 Score=39.41 Aligned_cols=30 Identities=27% Similarity=0.408 Sum_probs=28.1
Q ss_pred EEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
|+|.|+|..|..++.+|.+ |.+|.++.|..
T Consensus 6 ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 6 ILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 8999999999999999988 89999999875
No 400
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=69.96 E-value=2.4 Score=41.54 Aligned_cols=30 Identities=17% Similarity=0.222 Sum_probs=27.3
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
-|+|+|+|..|..+|..|.+ |.+|++.++.
T Consensus 175 tV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 175 AVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 38999999999999999999 9999998854
No 401
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=69.95 E-value=2.4 Score=39.68 Aligned_cols=31 Identities=23% Similarity=0.333 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-++|||+|..|..+|..|.+ |.+|.+.+|..
T Consensus 131 ~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 131 SILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 49999999999999999998 88999998763
No 402
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=69.91 E-value=2.4 Score=40.79 Aligned_cols=31 Identities=26% Similarity=0.453 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
-|.|||+|..|..+|..|+. |+ +|.++|...
T Consensus 6 kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 49999999999999999998 76 899999754
No 403
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=69.89 E-value=2.5 Score=39.11 Aligned_cols=30 Identities=23% Similarity=0.581 Sum_probs=27.4
Q ss_pred EEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
+.|||+|..|...|..|++ | .+|.+.++..
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 7899999999999999998 8 9999998763
No 404
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=69.83 E-value=2.5 Score=39.84 Aligned_cols=30 Identities=30% Similarity=0.383 Sum_probs=27.2
Q ss_pred cEEEEC-CCCchHHHHhhhhc-cCeeEEEecC
Q 009873 55 DYIVVG-GGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 55 DvIIVG-sG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
-++|+| +|..|..+|..|++ |.+|.++.|.
T Consensus 121 ~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 489999 99999999999998 8899999875
No 405
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=69.79 E-value=2.9 Score=39.02 Aligned_cols=30 Identities=20% Similarity=0.327 Sum_probs=27.9
Q ss_pred EEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
|+|.|+|..|..++.+|.+ |++|.++.|..
T Consensus 8 ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 8 LLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp EEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred EEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 9999999999999999988 89999998864
No 406
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=69.59 E-value=2.5 Score=39.50 Aligned_cols=30 Identities=33% Similarity=0.349 Sum_probs=27.2
Q ss_pred EEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+.|||+|..|...|..|++ |++|.++++..
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7899999999999999988 89999998763
No 407
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=69.56 E-value=2 Score=43.58 Aligned_cols=53 Identities=17% Similarity=0.121 Sum_probs=38.5
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHH
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLL 303 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lL 303 (523)
.+.+.|++|++++.|++|..+++ ++..|.+ ++. ++.+ +.||+|+++....+||
T Consensus 243 ~l~~~g~~i~~~~~V~~i~~~~~------~~~~v~~---~~~-----~~~a---------d~vv~a~p~~~~~~ll 295 (477)
T 3nks_A 243 HLTSRGVSVLRGQPVCGLSLQAE------GRWKVSL---RDS-----SLEA---------DHVISAIPASVLSELL 295 (477)
T ss_dssp HHHHTTCEEECSCCCCEEEECGG------GCEEEEC---SSC-----EEEE---------SEEEECSCHHHHHHHS
T ss_pred HHHhcCCEEEeCCEEEEEEEcCC------ceEEEEE---CCe-----EEEc---------CEEEECCCHHHHHHhc
Confidence 44566999999999999998766 4344532 343 3676 9999999986666653
No 408
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=69.47 E-value=2.6 Score=40.02 Aligned_cols=31 Identities=29% Similarity=0.381 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-+.|||.|..|..+|..|.. |.+|++.++..
T Consensus 159 ~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 159 QVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 49999999999999999988 99999999764
No 409
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=69.41 E-value=3.4 Score=38.94 Aligned_cols=30 Identities=20% Similarity=0.370 Sum_probs=27.4
Q ss_pred EEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+.|||.|..|...|..|++ |.+|.+.++..
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 3 VGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred EEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 7899999999999999988 89999998764
No 410
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=68.82 E-value=2.7 Score=38.87 Aligned_cols=31 Identities=23% Similarity=0.332 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
-++|||+|.+|..+|..|.+ |. +|.|..|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 69999999999999999998 86 899998864
No 411
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=68.66 E-value=3.1 Score=36.94 Aligned_cols=30 Identities=17% Similarity=0.354 Sum_probs=27.1
Q ss_pred EEEECC-CCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGG-GTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGs-G~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
|+|.|+ |..|..++.+|++ |++|.++.|..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 789995 9999999999988 99999999874
No 412
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=68.58 E-value=3.7 Score=39.50 Aligned_cols=31 Identities=26% Similarity=0.194 Sum_probs=27.1
Q ss_pred cEEEECCCCchHH-HHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCP-LAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~-~A~~Lae-g~~VlvlE~G~ 85 (523)
-|.|||.|.+|++ +|.-|.+ |++|.+.|+..
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3899999999997 7777777 99999999875
No 413
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=68.30 E-value=2.7 Score=42.68 Aligned_cols=32 Identities=31% Similarity=0.533 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHHhhhhc--cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD--NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae--g~~VlvlE~G~ 85 (523)
-.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~ 193 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD 193 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC
Confidence 369999999999999999986 89999999986
No 414
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=68.21 E-value=2.9 Score=40.04 Aligned_cols=31 Identities=16% Similarity=0.128 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
.+.|||.|..|...|..|++ | ++|.+.++..
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 49999999999999999999 9 9999999874
No 415
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=67.87 E-value=3.1 Score=39.41 Aligned_cols=31 Identities=23% Similarity=0.429 Sum_probs=27.5
Q ss_pred cEEEECCCCchHHHHhhhhccCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSDNFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Laeg~~VlvlE~G~ 85 (523)
-|-|||+|..|...|..|+.|++|++.++.+
T Consensus 14 ~V~vIG~G~MG~~iA~~laaG~~V~v~d~~~ 44 (293)
T 1zej_A 14 KVFVIGAGLMGRGIAIAIASKHEVVLQDVSE 44 (293)
T ss_dssp EEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHcCCEEEEEECCH
Confidence 4899999999999999988669999999864
No 416
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=67.78 E-value=3.2 Score=38.99 Aligned_cols=31 Identities=19% Similarity=0.295 Sum_probs=27.3
Q ss_pred cEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
-++|+|+|.+|..+|..|++ | .+|.|+.|..
T Consensus 128 ~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 128 TILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred EEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 48999999999999999998 8 4999998853
No 417
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=67.70 E-value=3.1 Score=37.13 Aligned_cols=30 Identities=30% Similarity=0.442 Sum_probs=27.3
Q ss_pred EEEECC-CCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGG-GTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGs-G~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
|+|.|+ |..|..+|.+|++ |.+|.++.|..
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 889997 9999999999988 99999998864
No 418
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=67.60 E-value=3.1 Score=43.22 Aligned_cols=31 Identities=16% Similarity=0.384 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.|+|||+|..|+-+|..|++ +.+|.+++|.+
T Consensus 188 ~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 188 RVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred EEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 58999999999999999999 89999999986
No 419
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=67.44 E-value=2.7 Score=40.09 Aligned_cols=31 Identities=19% Similarity=0.262 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+.|||+|..|...|..|++ |.+|.++++..
T Consensus 32 ~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 32 KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred eEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 59999999999999999988 89999998764
No 420
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=67.42 E-value=3.1 Score=39.79 Aligned_cols=30 Identities=17% Similarity=0.368 Sum_probs=27.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G 84 (523)
-++|+|+|.+|..+|..|++ |. +|.|+-|.
T Consensus 150 ~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 150 TMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 49999999999999999998 85 89999886
No 421
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=67.26 E-value=3.1 Score=37.55 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=27.6
Q ss_pred EEEECC-CCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGG-GTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGs-G~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++|.|+ |..|..+|.+|++ |++|.++.|..
T Consensus 24 ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 24 VLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 899997 9999999999988 99999999874
No 422
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=67.22 E-value=2.9 Score=40.03 Aligned_cols=31 Identities=23% Similarity=0.385 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cC--eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF--SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G~ 85 (523)
-|.|||.|..|.+.|..|++ |. +|.+.++..
T Consensus 35 kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 49999999999999999998 87 999998764
No 423
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=67.18 E-value=3.1 Score=38.97 Aligned_cols=31 Identities=10% Similarity=0.162 Sum_probs=27.1
Q ss_pred cEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
-++|+|+|.+|..+|..|++ | .+|.|+.|..
T Consensus 122 ~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 122 RVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 48999999999999999998 8 5999997753
No 424
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=66.91 E-value=3 Score=39.01 Aligned_cols=30 Identities=23% Similarity=0.373 Sum_probs=26.9
Q ss_pred EEEECCCCchHHHHhhhhc-cC--eeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NF--SVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G~ 85 (523)
+.|||+|..|...|..|++ |. +|++.++..
T Consensus 4 I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 7899999999999999998 77 899998753
No 425
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=66.90 E-value=2.8 Score=45.23 Aligned_cols=31 Identities=32% Similarity=0.553 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|-|||+|..|..+|..|++ |++|++.++..
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 39999999999999999999 99999999864
No 426
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=66.86 E-value=3 Score=42.31 Aligned_cols=30 Identities=23% Similarity=0.308 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
-|+|||+|-.|...|..|.+ |.+|.|++..
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 38999999999999999998 9999999974
No 427
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=66.83 E-value=3.2 Score=36.29 Aligned_cols=30 Identities=23% Similarity=0.406 Sum_probs=27.5
Q ss_pred EEEECC-CCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGG-GTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGs-G~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++|+|+ |..|..+|.+|.+ |.+|.++.|..
T Consensus 6 ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 6 IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 899998 9999999999988 89999999864
No 428
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=66.72 E-value=2.9 Score=41.58 Aligned_cols=28 Identities=21% Similarity=0.362 Sum_probs=25.6
Q ss_pred cEEEECCCCchHHHHhhhhc--cCeeEEEe
Q 009873 55 DYIVVGGGTTGCPLAATLSD--NFSVLLVE 82 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae--g~~VlvlE 82 (523)
.|.|||+|..|+..|..|++ |.+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 48899999999999999975 79999998
No 429
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=66.65 E-value=3.1 Score=41.53 Aligned_cols=31 Identities=26% Similarity=0.261 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-++|||.|..|..+|..|.. |.+|++.|+.+
T Consensus 222 tV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 222 QVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 49999999999999999988 99999999753
No 430
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=66.58 E-value=3.9 Score=38.23 Aligned_cols=30 Identities=23% Similarity=0.422 Sum_probs=27.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G 84 (523)
.++|+|+|.+|..+|..|++ |. +|.|+-|-
T Consensus 121 ~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 121 KVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp CEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred EEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 59999999999999999998 84 89999775
No 431
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=66.57 E-value=3.1 Score=39.75 Aligned_cols=30 Identities=13% Similarity=0.200 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G 84 (523)
.|.|||.|..|...|..|++ |+ +|.+.++.
T Consensus 26 ~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 26 KLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred EEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 59999999999999999999 88 99999985
No 432
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=66.51 E-value=4.1 Score=38.41 Aligned_cols=31 Identities=23% Similarity=0.286 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+.|||+|..|...|..|++ |++|.+.++..
T Consensus 6 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 6 KIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp EEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 58999999999999999988 89999998753
No 433
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=66.34 E-value=3.2 Score=43.37 Aligned_cols=33 Identities=30% Similarity=0.516 Sum_probs=30.3
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGGS 86 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~~ 86 (523)
-.+||||.|-.|..+|..|.+ |.+|+++|+.+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 469999999999999999998 999999999863
No 434
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=66.21 E-value=3.2 Score=39.65 Aligned_cols=31 Identities=19% Similarity=0.371 Sum_probs=27.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
-|.|||+|..|..+|..|+. |. +|.++|...
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 38999999999999999988 75 899999753
No 435
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=66.05 E-value=3.2 Score=38.97 Aligned_cols=31 Identities=16% Similarity=0.373 Sum_probs=28.1
Q ss_pred cEEEECC-CCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGG-GTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGs-G~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-+.|||+ |..|...|..|++ |++|.+.++..
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4999999 9999999999988 89999998763
No 436
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=66.00 E-value=3.1 Score=43.79 Aligned_cols=33 Identities=27% Similarity=0.385 Sum_probs=29.3
Q ss_pred cccEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
..-|+|||+|..|+.+|..|+. | .++.|++...
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~ 51 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDT 51 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 3469999999999999999999 8 6899999775
No 437
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=65.96 E-value=1.8 Score=39.07 Aligned_cols=31 Identities=26% Similarity=0.633 Sum_probs=27.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEE-EecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLL-VERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~Vlv-lE~G~ 85 (523)
-+.|||+|..|...|..|++ |.+|.+ .++..
T Consensus 25 kI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 25 TYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 59999999999999999998 899988 77654
No 438
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=65.79 E-value=4.4 Score=41.23 Aligned_cols=32 Identities=34% Similarity=0.469 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHhhhhc--cC-eeEEEecCCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD--NF-SVLLVERGGS 86 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae--g~-~VlvlE~G~~ 86 (523)
.|.|||+|..|+.+|..|++ |+ +|+++++...
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 59999999999999999987 58 9999998763
No 439
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=65.73 E-value=3.6 Score=40.23 Aligned_cols=37 Identities=24% Similarity=0.563 Sum_probs=28.8
Q ss_pred ccCCcccEEEECCCCchHHHHhhhhccCeeEEEecCC
Q 009873 49 VAGKSFDYIVVGGGTTGCPLAATLSDNFSVLLVERGG 85 (523)
Q Consensus 49 ~~~~~~DvIIVGsG~aG~~~A~~Laeg~~VlvlE~G~ 85 (523)
+..++--|+|+|+|..|..+|..|++..+|.+.++..
T Consensus 12 ~~g~~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~ 48 (365)
T 3abi_A 12 IEGRHMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNN 48 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred ccCCccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCH
Confidence 3444556999999999999999999988899887653
No 440
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=65.55 E-value=3.3 Score=39.82 Aligned_cols=30 Identities=17% Similarity=0.428 Sum_probs=26.8
Q ss_pred cEEEECCCCchHHHHhhhhc-cC--eeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF--SVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G 84 (523)
-|.|||+|..|.++|..|+. +. +|.++|..
T Consensus 7 kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 7 KVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 48999999999999999998 65 89999974
No 441
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=65.46 E-value=3.2 Score=42.36 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|+|||.|..|..+|..|.. |.+|++.|+.+
T Consensus 276 tV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 276 KVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 49999999999999999987 99999999864
No 442
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=65.27 E-value=4.6 Score=40.78 Aligned_cols=30 Identities=23% Similarity=0.334 Sum_probs=27.2
Q ss_pred EEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
|+|+|+|..|..+|..|++ |.+|.++.|..
T Consensus 6 VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 6 VLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp EEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred EEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 8899999999999999998 89999998753
No 443
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=65.11 E-value=5.2 Score=37.17 Aligned_cols=30 Identities=10% Similarity=0.092 Sum_probs=26.8
Q ss_pred EEEECC---CCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGG---GTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGs---G~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++|.|+ |..|..+|.+|++ |.+|+++.|..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 889997 6899999999998 99999998864
No 444
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=65.07 E-value=5 Score=38.35 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=27.0
Q ss_pred ccEEEECCC-CchHHHHhhhhc-cCeeEEEecC
Q 009873 54 FDYIVVGGG-TTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 54 ~DvIIVGsG-~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
-.++|||+| ..|..+|..|.. |.+|.+++|.
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 469999999 569999999988 8999999775
No 445
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=64.63 E-value=3.3 Score=41.58 Aligned_cols=28 Identities=25% Similarity=0.453 Sum_probs=26.0
Q ss_pred cEEEECCCCchHHHHhhhhc-cC---eeEEEe
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF---SVLLVE 82 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~---~VlvlE 82 (523)
-++|+|+|.+|..+|..|.+ |. +|.|++
T Consensus 188 rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 188 TLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred EEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 49999999999999999998 86 899999
No 446
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=64.63 E-value=3.9 Score=41.38 Aligned_cols=50 Identities=20% Similarity=0.185 Sum_probs=36.7
Q ss_pred CCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEec--------------CCCCCceeEEEecCCCCCCCCCcEEEecCCc
Q 009873 232 KNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKS--------------DGSSNHMHEAYLNKPGNSSTWGDVILSAGAL 297 (523)
Q Consensus 232 ~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~--------------~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~ 297 (523)
.|+++++++.+++|.-+ + ++.+|++.+. +|+ ..++.+ +.||+|.|.-
T Consensus 265 ~gv~i~~~~~~~~i~~~-~------~v~~v~~~~~~~~~~~~~~~~~~~~g~---~~~i~~---------d~vi~a~G~~ 325 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK-R------KVERIVLGRNELVSDGSGRVAAKDTGE---REELPA---------QLVVRSVGYR 325 (456)
T ss_dssp EEEEEECSEEEEEEECS-S------SCCEEEEEEEEEEECSSSSEEEEEEEE---EEEEEC---------SEEEECSCEE
T ss_pred ceEEEEeCCCCeEEecC-C------cEeEEEEEEEEecCCCcccccccCCCc---eEEEEc---------CEEEEccccc
Confidence 68999999999999754 3 6777776531 243 456776 9999999976
Q ss_pred hhH
Q 009873 298 GSP 300 (523)
Q Consensus 298 ~tp 300 (523)
.++
T Consensus 326 p~~ 328 (456)
T 1lqt_A 326 GVP 328 (456)
T ss_dssp CCC
T ss_pred cCC
Confidence 555
No 447
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=64.56 E-value=3.8 Score=41.55 Aligned_cols=31 Identities=42% Similarity=0.716 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHhhhhccCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSDNFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Laeg~~VlvlE~G~ 85 (523)
.++|+|+|-.|..+|..|.++.+|-++|+..
T Consensus 237 ~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~ 267 (461)
T 4g65_A 237 RIMIVGGGNIGASLAKRLEQTYSVKLIERNL 267 (461)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred EEEEEcchHHHHHHHHHhhhcCceEEEecCH
Confidence 6999999999999999997789999999975
No 448
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=64.40 E-value=3.1 Score=42.98 Aligned_cols=30 Identities=27% Similarity=0.460 Sum_probs=26.4
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
-++|+|+|.+|..+|..|++ |.+|.++.|.
T Consensus 366 ~vlV~GaGGig~aia~~L~~~G~~V~i~~R~ 396 (523)
T 2o7s_A 366 TVVVIGAGGAGKALAYGAKEKGAKVVIANRT 396 (523)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCC-CEEEESS
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 49999999999999999998 8999999875
No 449
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=64.34 E-value=5.2 Score=37.35 Aligned_cols=30 Identities=30% Similarity=0.492 Sum_probs=26.7
Q ss_pred EEEECCCCchHHHHhhhhccCeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSDNFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Laeg~~VlvlE~G~ 85 (523)
+.|||+|..|...|..|++|++|.++++..
T Consensus 4 i~iiG~G~~G~~~a~~l~~g~~V~~~~~~~ 33 (289)
T 2cvz_A 4 VAFIGLGAMGYPMAGHLARRFPTLVWNRTF 33 (289)
T ss_dssp EEEECCSTTHHHHHHHHHTTSCEEEECSST
T ss_pred EEEEcccHHHHHHHHHHhCCCeEEEEeCCH
Confidence 789999999999999987788999998764
No 450
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=64.23 E-value=3.7 Score=38.85 Aligned_cols=30 Identities=27% Similarity=0.160 Sum_probs=26.9
Q ss_pred EEEECCCCchHHHHhhhhc-cC--eeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NF--SVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G~ 85 (523)
+.|||+|..|.++|..|+. +. +|.++++..
T Consensus 3 I~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 7899999999999999998 65 899999864
No 451
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=64.01 E-value=3.6 Score=38.15 Aligned_cols=31 Identities=26% Similarity=0.425 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+.|||+|..|..+|..|.+ |.+|.+.++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999988 88999998763
No 452
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=63.99 E-value=3.7 Score=41.93 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=29.0
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-++.|||.|..|...|..|++ |++|.+.+|..
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 369999999999999999999 89999998764
No 453
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=63.83 E-value=4.3 Score=36.09 Aligned_cols=30 Identities=27% Similarity=0.439 Sum_probs=27.4
Q ss_pred EEEEC-CCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVG-GGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVG-sG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
|+|.| +|..|..++.+|++ |.+|.++.|..
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 78999 79999999999998 89999999875
No 454
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=63.73 E-value=4.3 Score=36.89 Aligned_cols=30 Identities=23% Similarity=0.462 Sum_probs=26.6
Q ss_pred EEEECC-CCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGG-GTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGs-G~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++|.|+ |..|..+|.+|++ |.+|+++.|..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 788886 8899999999998 99999998864
No 455
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=63.65 E-value=3.6 Score=39.14 Aligned_cols=32 Identities=31% Similarity=0.404 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.+.|||.|..|...|..|++ |++|.+.++..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 359999999999999999998 89999998764
No 456
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=63.47 E-value=5.2 Score=34.26 Aligned_cols=54 Identities=15% Similarity=0.100 Sum_probs=37.0
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHHHHhhC
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQLLLLSG 307 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~lLl~SG 307 (523)
.+++.|++++++ +|+++..+++ . +.+...+| ++.+ +.||+|+|.. |.++...|
T Consensus 65 ~~~~~gv~v~~~-~v~~i~~~~~------~---~~v~~~~g------~i~a---------d~vI~A~G~~--~~~~~~~g 117 (180)
T 2ywl_A 65 HARRYGAEVRPG-VVKGVRDMGG------V---FEVETEEG------VEKA---------ERLLLCTHKD--PTLPSLLG 117 (180)
T ss_dssp HHHHTTCEEEEC-CCCEEEECSS------S---EEEECSSC------EEEE---------EEEEECCTTC--CHHHHHHT
T ss_pred HHHHcCCEEEeC-EEEEEEEcCC------E---EEEEECCC------EEEE---------CEEEECCCCC--CCccccCC
Confidence 455678999999 9999987655 2 22222223 3776 9999999975 45555555
Q ss_pred C
Q 009873 308 I 308 (523)
Q Consensus 308 i 308 (523)
+
T Consensus 118 ~ 118 (180)
T 2ywl_A 118 L 118 (180)
T ss_dssp C
T ss_pred C
Confidence 4
No 457
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=63.16 E-value=3.5 Score=38.09 Aligned_cols=28 Identities=21% Similarity=0.198 Sum_probs=25.4
Q ss_pred EEEECCCCchHHHHhhhhc-cCeeEEEec
Q 009873 56 YIVVGGGTTGCPLAATLSD-NFSVLLVER 83 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~~VlvlE~ 83 (523)
+.|||.|..|...|..|++ |++|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 7799999999999999998 899998765
No 458
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=63.15 E-value=3.9 Score=39.35 Aligned_cols=30 Identities=27% Similarity=0.272 Sum_probs=26.8
Q ss_pred cEEEECCCCchHHHHhhhhc-cC--eeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF--SVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G 84 (523)
-|.|||+|..|..+|..|+. +. .|.++|..
T Consensus 23 kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 23 KITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp EEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 49999999999999999988 75 89999974
No 459
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=63.09 E-value=3.9 Score=37.67 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHHhhhhc-c----CeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-N----FSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g----~~VlvlE~G~ 85 (523)
-+.|||+|..|...|..|++ | .+|.+.++..
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 48999999999999999988 8 6899998764
No 460
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=62.96 E-value=4 Score=38.81 Aligned_cols=31 Identities=26% Similarity=0.475 Sum_probs=27.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cC--eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF--SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G~ 85 (523)
-|.|||+|..|..+|+.|+. ++ .|.|+|...
T Consensus 16 kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 16 KITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 49999999999999999988 76 899999865
No 461
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=62.93 E-value=3.7 Score=41.88 Aligned_cols=31 Identities=35% Similarity=0.482 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.+.|||+|..|...|..|++ |++|.+.++..
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58899999999999999998 89999998753
No 462
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=62.62 E-value=4 Score=39.72 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=27.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G 84 (523)
-|+|+|.|..|..+|..|.+ |.+|++.|..
T Consensus 177 tV~I~G~GnVG~~~A~~l~~~GakVvvsD~~ 207 (355)
T 1c1d_A 177 TVLVQGLGAVGGSLASLAAEAGAQLLVADTD 207 (355)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 49999999999999999998 9999998753
No 463
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=62.62 E-value=4 Score=44.02 Aligned_cols=31 Identities=32% Similarity=0.380 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|-|||+|..|.-+|..++. |++|+|+|...
T Consensus 318 ~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 318 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 38999999999999999999 99999999764
No 464
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=62.59 E-value=3.9 Score=39.66 Aligned_cols=31 Identities=29% Similarity=0.328 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-+.|||.|..|.+.|..|.+ |.+|.+.++..
T Consensus 10 kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 38999999999999999998 89999998764
No 465
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=62.50 E-value=4 Score=40.62 Aligned_cols=31 Identities=35% Similarity=0.536 Sum_probs=27.8
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
-|+|||+|..|..+|..|.. |. +|+++++..
T Consensus 169 ~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 169 TVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 49999999999999999988 86 999998764
No 466
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=62.33 E-value=4.2 Score=39.10 Aligned_cols=31 Identities=23% Similarity=0.358 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
-+.|||+|..|.++|..|+. ++ +|.++|...
T Consensus 9 kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 9 KIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 49999999999999999988 77 999999864
No 467
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=62.21 E-value=4.6 Score=39.33 Aligned_cols=30 Identities=27% Similarity=0.386 Sum_probs=27.4
Q ss_pred EEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++|+|||.-|..+|+.+.+ |++|++++..+
T Consensus 4 I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 4 ICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 7899999999999998888 99999998765
No 468
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=62.12 E-value=5.2 Score=37.02 Aligned_cols=30 Identities=13% Similarity=0.206 Sum_probs=26.5
Q ss_pred EEEEC---CCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVG---GGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVG---sG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++|.| +|..|..+|.+|++ |.+|+++.+..
T Consensus 10 vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 10 ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred EEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 89999 48889999999998 99999998764
No 469
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=62.07 E-value=4.2 Score=39.73 Aligned_cols=32 Identities=13% Similarity=0.245 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-.|.|||.|..|...|..|++ |++|.+.++..
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999 89999998864
No 470
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=61.88 E-value=4.5 Score=37.75 Aligned_cols=30 Identities=27% Similarity=0.485 Sum_probs=26.5
Q ss_pred cEEEECCCCchHHHHhhhhc-c-CeeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-N-FSVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G 84 (523)
.++|+|+|.++-++++.|++ | .+|.|+.|-
T Consensus 127 ~~lilGaGGaarai~~aL~~~g~~~i~i~nRt 158 (269)
T 3tum_A 127 RALVIGCGGVGSAIAYALAEAGIASITLCDPS 158 (269)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred eEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC
Confidence 49999999999999999988 7 688898764
No 471
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=61.86 E-value=5.6 Score=37.53 Aligned_cols=30 Identities=13% Similarity=0.151 Sum_probs=26.3
Q ss_pred EEEECCC---CchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGGG---TTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG---~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++|.|++ ..|..+|.+|++ |.+|+++.+..
T Consensus 33 vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 33 GVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 8889985 789999999998 99999998763
No 472
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=61.81 E-value=4.1 Score=37.65 Aligned_cols=31 Identities=26% Similarity=0.428 Sum_probs=27.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cCe-eEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFS-VLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~-VlvlE~G~ 85 (523)
-+.|||+|..|...|..|++ |++ |.+.++..
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred eEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 49999999999999999998 888 88988753
No 473
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=61.79 E-value=4.6 Score=35.96 Aligned_cols=30 Identities=27% Similarity=0.349 Sum_probs=26.8
Q ss_pred EEEEC-CCCchHHHHhhhh-c-cCeeEEEecCC
Q 009873 56 YIVVG-GGTTGCPLAATLS-D-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVG-sG~aG~~~A~~La-e-g~~VlvlE~G~ 85 (523)
++|.| +|..|..+|.+|+ + |++|.++.|..
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 89999 5999999999999 6 89999998864
No 474
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=61.53 E-value=4.4 Score=38.96 Aligned_cols=30 Identities=23% Similarity=0.333 Sum_probs=26.6
Q ss_pred cEEEECCCCchHHHHhhhhc-cC--eeEEEecC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF--SVLLVERG 84 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G 84 (523)
-|.|||+|..|.++|..|+. +. ++.++|..
T Consensus 11 kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 11 KVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 48999999999999999988 64 89999974
No 475
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=61.49 E-value=4.4 Score=40.60 Aligned_cols=31 Identities=26% Similarity=0.224 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-++|||.|..|..+|.+|.. |.+|++.|+.+
T Consensus 249 TVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 249 VAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 49999999999999999987 99999999754
No 476
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=61.45 E-value=5.6 Score=36.59 Aligned_cols=30 Identities=27% Similarity=0.343 Sum_probs=26.5
Q ss_pred EEEECC---CCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGG---GTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGs---G~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++|.|+ |..|..+|.+|++ |.+|+++.|..
T Consensus 11 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 44 (261)
T 2wyu_A 11 ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE 44 (261)
T ss_dssp EEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 899997 5899999999998 99999998753
No 477
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=61.45 E-value=4.4 Score=41.36 Aligned_cols=31 Identities=26% Similarity=0.354 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
.|.|||.|..|...|..|++ |++|.+.++..
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 58999999999999999998 89999998864
No 478
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=65.58 E-value=1.7 Score=38.65 Aligned_cols=31 Identities=23% Similarity=0.351 Sum_probs=27.8
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-+.|||+|..|...|..|.+ |.+|.+.++..
T Consensus 21 ~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 21 VVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 48899999999999999998 89999998764
No 479
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=61.25 E-value=5.5 Score=40.64 Aligned_cols=31 Identities=26% Similarity=0.469 Sum_probs=27.6
Q ss_pred cEEEECCCCchHHHHhhhhc-c--CeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-N--FSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g--~~VlvlE~G~ 85 (523)
.+.|||.|..|+..|..|++ | ++|+++++..
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 49999999999999999998 4 8999998753
No 480
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=61.20 E-value=4.4 Score=38.04 Aligned_cols=28 Identities=21% Similarity=0.393 Sum_probs=25.9
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEe
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVE 82 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE 82 (523)
-+.|||+|..|...|..|++ |++|.+.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT 33 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc
Confidence 38899999999999999998 89999987
No 481
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=60.94 E-value=4.5 Score=41.76 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=28.9
Q ss_pred cccEEEECCCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
..-|+|||+|..|+.+|..|+. | .++.|+|-..
T Consensus 32 ~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~ 66 (531)
T 1tt5_A 32 SAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQ 66 (531)
T ss_dssp HCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 3569999999999999999999 8 6899998654
No 482
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=60.89 E-value=3.3 Score=44.63 Aligned_cols=31 Identities=19% Similarity=0.301 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|-|||+|..|..+|..|++ |++|++.|+..
T Consensus 316 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 39999999999999999998 99999999864
No 483
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=60.78 E-value=4.6 Score=38.91 Aligned_cols=31 Identities=26% Similarity=0.295 Sum_probs=26.9
Q ss_pred ccEEEECCCCchHHHHhhhhc-cC--eeEEEecC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NF--SVLLVERG 84 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G 84 (523)
--|.|||+|..|..+|+.|+. +. .|.|+|..
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 359999999999999999987 64 89999874
No 484
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=60.56 E-value=5.9 Score=40.57 Aligned_cols=48 Identities=10% Similarity=0.072 Sum_probs=36.5
Q ss_pred hCCCCCeEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCc
Q 009873 228 AGNPKNLVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGAL 297 (523)
Q Consensus 228 ~~~~~g~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~ 297 (523)
.+.+.|++++.+ +|++|..++++ ++.+|+.. +|+ ++.+ +.||.|+|+.
T Consensus 182 ~a~~~gv~~~~~-~v~~i~~~~~~-----~~~~v~~~--~g~-----~~~a---------d~vV~A~G~~ 229 (511)
T 2weu_A 182 YAIARGVRHVVD-DVQHVGQDERG-----WISGVHTK--QHG-----EISG---------DLFVDCTGFR 229 (511)
T ss_dssp HHHHTTCEEEEC-CEEEEEECTTS-----CEEEEEES--SSC-----EEEC---------SEEEECCGGG
T ss_pred HHHHCCCEEEEC-eEeEEEEcCCC-----CEEEEEEC--CCC-----EEEc---------CEEEECCCcc
Confidence 455689999999 99999986553 67777653 354 3676 9999999974
No 485
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=60.46 E-value=6.5 Score=36.17 Aligned_cols=30 Identities=17% Similarity=0.338 Sum_probs=25.7
Q ss_pred EEEECCC---CchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGGG---TTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG---~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+||-|++ ..|..+|.+|++ |.+|++..+..
T Consensus 9 alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~ 42 (256)
T 4fs3_A 9 YVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE 42 (256)
T ss_dssp EEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEECCCCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 7888863 589999999998 99999998864
No 486
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=60.45 E-value=5.8 Score=36.56 Aligned_cols=30 Identities=10% Similarity=0.133 Sum_probs=26.4
Q ss_pred EEEECC---CCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGG---GTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGs---G~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++|.|+ |..|..+|.+|++ |.+|+++.|..
T Consensus 12 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 12 ILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp EEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred EEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 888897 5899999999998 99999998764
No 487
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=60.43 E-value=4.8 Score=41.23 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=29.7
Q ss_pred cccEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 53 SFDYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 53 ~~DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
+..+.|||.|..|...|..|++ |++|.+.++..
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3569999999999999999999 89999998864
No 488
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=60.38 E-value=6.3 Score=37.47 Aligned_cols=28 Identities=25% Similarity=0.196 Sum_probs=24.9
Q ss_pred EEEECC---CCchHHHHhhhhc-cCeeEEEec
Q 009873 56 YIVVGG---GTTGCPLAATLSD-NFSVLLVER 83 (523)
Q Consensus 56 vIIVGs---G~aG~~~A~~Lae-g~~VlvlE~ 83 (523)
+||.|+ |..|..+|.+|++ |.+|+++.+
T Consensus 12 ~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r 43 (315)
T 2o2s_A 12 AFVAGVADSHGYGWAIAKHLASAGARVALGTW 43 (315)
T ss_dssp EEEECCSSSSSHHHHHHHHHHTTTCEEEEEEC
T ss_pred EEEeCCCCCCChHHHHHHHHHHCCCEEEEEec
Confidence 889996 7889999999998 999999964
No 489
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=60.21 E-value=10 Score=38.52 Aligned_cols=52 Identities=15% Similarity=0.167 Sum_probs=36.1
Q ss_pred hCCCCC-eEEEeccEEEEEEEcCCCCCCCceeeEEEEEecCCCCCceeEEEecCCCCCCCCCcEEEecCCchhHHH
Q 009873 228 AGNPKN-LVVLLNATVNNIIFSNNGKANESRAHGIRFIKSDGSSNHMHEAYLNKPGNSSTWGDVILSAGALGSPQL 302 (523)
Q Consensus 228 ~~~~~g-~~i~~~~~V~~l~~~~~g~~~~~~v~GV~~~~~~g~~~~~~~i~a~~~~~~~~~~~VILaaGa~~tp~l 302 (523)
.+.+.| ++|+++++|++|..+++ .+ .+...+|+ ++.+ +.||+|+|.-...+|
T Consensus 264 ~l~~~g~~~i~~~~~V~~i~~~~~------~v---~v~~~~g~-----~~~a---------d~vI~a~~~~~l~~i 316 (495)
T 2vvm_A 264 EAAGTGRLGYVFGCPVRSVVNERD------AA---RVTARDGR-----EFVA---------KRVVCTIPLNVLSTI 316 (495)
T ss_dssp HHHTTTCEEEESSCCEEEEEECSS------SE---EEEETTCC-----EEEE---------EEEEECCCGGGGGGS
T ss_pred HhhhcCceEEEeCCEEEEEEEcCC------EE---EEEECCCC-----EEEc---------CEEEECCCHHHHhhe
Confidence 444556 99999999999998665 33 23333465 3666 999999997544443
No 490
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=60.16 E-value=4.1 Score=35.68 Aligned_cols=30 Identities=7% Similarity=0.092 Sum_probs=25.7
Q ss_pred EEEEC-CCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVG-GGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVG-sG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
|+|+| +|..|..++..+.. |.+|+++++..
T Consensus 42 vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 73 (198)
T 1pqw_A 42 VLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 73 (198)
T ss_dssp EEETTTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred EEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH
Confidence 88999 58899999988877 99999998753
No 491
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=59.84 E-value=4.9 Score=38.56 Aligned_cols=31 Identities=26% Similarity=0.348 Sum_probs=27.5
Q ss_pred cEEEECCCCchHHHHhhhhc-cC-eeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NF-SVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~-~VlvlE~G~ 85 (523)
-|.|||+|..|.++|..|+. +. +|.++|...
T Consensus 7 kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 7 KITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 48999999999999999988 66 999999864
No 492
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=59.64 E-value=4.9 Score=40.13 Aligned_cols=31 Identities=29% Similarity=0.263 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|+|||.|..|..+|..|.. |.+|++.|+.+
T Consensus 213 tVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 213 TACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 49999999999999999988 99999999753
No 493
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=59.63 E-value=5 Score=38.36 Aligned_cols=30 Identities=23% Similarity=0.509 Sum_probs=26.8
Q ss_pred EEEECCCCchHHHHhhhhc-cC--eeEEEecCC
Q 009873 56 YIVVGGGTTGCPLAATLSD-NF--SVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G~ 85 (523)
|.|||+|..|.++|..|+. +. .|.++|...
T Consensus 3 v~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 3 VTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 7899999999999999988 65 899999864
No 494
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=59.43 E-value=4.9 Score=38.50 Aligned_cols=32 Identities=19% Similarity=0.273 Sum_probs=27.8
Q ss_pred ccEEEECCCCchHHHHhhhhc-cC--eeEEEecCC
Q 009873 54 FDYIVVGGGTTGCPLAATLSD-NF--SVLLVERGG 85 (523)
Q Consensus 54 ~DvIIVGsG~aG~~~A~~Lae-g~--~VlvlE~G~ 85 (523)
.-|.|||+|..|.++|..|+. +. +|.++|...
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 469999999999999999998 65 899999754
No 495
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=59.33 E-value=6.8 Score=36.05 Aligned_cols=30 Identities=17% Similarity=0.315 Sum_probs=25.4
Q ss_pred EEEECCC-C--chHHHHhhhhc-cCeeEEEecCC
Q 009873 56 YIVVGGG-T--TGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 56 vIIVGsG-~--aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
++|.|++ . .|..+|.+|++ |.+|+++.+..
T Consensus 10 vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 10 IVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 8889974 4 79999999998 99999997753
No 496
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=59.22 E-value=4.8 Score=38.60 Aligned_cols=31 Identities=13% Similarity=0.202 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHhhhhc-c----CeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-N----FSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g----~~VlvlE~G~ 85 (523)
.+.|||+|..|...|..|++ | .+|.+.++..
T Consensus 24 kI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 24 SVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 49999999999999999988 7 7899998764
No 497
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=59.10 E-value=5.2 Score=36.11 Aligned_cols=31 Identities=23% Similarity=0.441 Sum_probs=27.6
Q ss_pred cEEEEC-CCCchHHHHhhhhc-c-CeeEEEecCC
Q 009873 55 DYIVVG-GGTTGCPLAATLSD-N-FSVLLVERGG 85 (523)
Q Consensus 55 DvIIVG-sG~aG~~~A~~Lae-g-~~VlvlE~G~ 85 (523)
-|+|.| +|..|..+|.+|++ | .+|.++.|..
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 389999 69999999999998 8 8999999875
No 498
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=58.77 E-value=5.3 Score=38.61 Aligned_cols=31 Identities=29% Similarity=0.452 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-|.|||.|..|.+.|..|++ |.+|++.++..
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred EEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 39999999999999999988 89999988753
No 499
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=58.71 E-value=7.5 Score=37.09 Aligned_cols=30 Identities=27% Similarity=0.389 Sum_probs=26.6
Q ss_pred EEEECC-CCchHHHHhhhhc-c--CeeEEEecCC
Q 009873 56 YIVVGG-GTTGCPLAATLSD-N--FSVLLVERGG 85 (523)
Q Consensus 56 vIIVGs-G~aG~~~A~~Lae-g--~~VlvlE~G~ 85 (523)
|.|||+ |..|.++|..|++ + ..|.++|...
T Consensus 3 I~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 3 VAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 789998 9999999999998 6 6899998754
No 500
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=58.63 E-value=5.7 Score=38.30 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHhhhhc-cCeeEEEecCC
Q 009873 55 DYIVVGGGTTGCPLAATLSD-NFSVLLVERGG 85 (523)
Q Consensus 55 DvIIVGsG~aG~~~A~~Lae-g~~VlvlE~G~ 85 (523)
-+.|||.|..|..+|.+|+. |.+|++.++..
T Consensus 152 ~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 152 TIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 49999999999999999988 99999998764
Done!