BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009875
(523 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P95245|PHLC_MYCTU Phospholipase C 3 OS=Mycobacterium tuberculosis GN=plcC PE=3 SV=2
Length = 517
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 175/450 (38%), Gaps = 121/450 (26%)
Query: 39 IKTIVVLVMENRSFDHMLGWMKKAINPRINGVTGNECNSVSTKTPKSQTICFTDDAEFVD 98
I+ IV+ + ENRSFDH G T + + T TP Q + + + +D
Sbjct: 52 IEHIVLCLQENRSFDHYFG-------------TLSAVDGFDTPTPLFQQKGWNPETQALD 98
Query: 99 P-----------------------DPGHSFEAVEQQVFGS---GVIPSMSGFVEQALSMS 132
P DP H + A G G +P+ QA + S
Sbjct: 99 PTGITLPYRINTTGGPNGVGECVNDPDHQWIAAHLSWNGGANDGWLPA------QARTRS 152
Query: 133 PNLSETVMKGFSAEAVPVYAALIREFALYDRWFSSIPGPTQPNRLFVYSATSHGSTSHVK 192
+ VM ++ +P++ L F + D++FSS+ G T PNRL+ SAT V
Sbjct: 153 VANTPVVMGYYARPDIPIHYLLADTFTICDQYFSSLLGGTMPNRLYWISAT-------VN 205
Query: 193 KLLAQGYPQ--------------KTIFDSLHENGIDFGIYFQTIPSTLFYRNLRKLKYIF 238
QG PQ + + +L + GI + +Y + L +L + Y+
Sbjct: 206 PDGDQGGPQIVEPAIQPKLTFTWRIMPQNLSDAGISWKVYNSKLLGGLNDTSLSRNGYVG 265
Query: 239 KFHQ----------------YDLKFKRDARKGNLPSLTVIEPRYFDLKGFPANDDHPSHD 282
F Q Y F RD LP ++ + P +HPS
Sbjct: 266 SFKQAADPRSDLARYGIAPAYPWDFIRDVINNTLPQVSWVVP-------LTVESEHPSFP 318
Query: 283 VANGQKLVKEVYETLRASPQ-WNETLLVITYDEHGGFYDHVETPYVNVPNPDGNTGP-AP 340
VA G + + L +P W +T L+I YDEHGGF+DHV TP P+G G P
Sbjct: 319 VAVGAVTIVNLIRVLLRNPAVWEKTALIIAYDEHGGFFDHV-TPLT---APEGTPGEWIP 374
Query: 341 SFFKFDR------------LGVRVPTIMVSPWIKKGTVMSGPKGPTPNSEFEHSSIPATI 388
+ D+ LG RVP ++SP+ + G ++ + F+H+S I
Sbjct: 375 NSVDIDKVDGSGGIRGPIGLGFRVPCFVISPYSRGGLMV--------HDRFDHTSQLQLI 426
Query: 389 KKMFNLSSNFLTHRDAWAGTFEEVVGQLTS 418
K F + LT A V G +TS
Sbjct: 427 GKRFGVPVPNLTPWRA------SVTGDMTS 450
>sp|P0A5R8|PHLD_MYCTU Phospholipase C 4 OS=Mycobacterium tuberculosis GN=plcD PE=3 SV=1
Length = 514
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 179/436 (41%), Gaps = 95/436 (21%)
Query: 39 IKTIVVLVMENRSFDHMLG--------------WMKKAINPRINGVTGNECNSV----ST 80
I+ V + ENRSFDH G + +K NP + +T
Sbjct: 50 IEHFVFFMQENRSFDHYFGTLSGTDGFNTVSPLFQQKGWNPMTQALDATGVTMPYRFDTT 109
Query: 81 KTPKSQTICFTDDAEFVDPDPGHSFEAVEQQVFGSGVIPSMSGFVEQALSMSPNLSETVM 140
+ P F D A DPD HS+ A+ + + GV + + QA + S + TVM
Sbjct: 110 RGP------FLDGACVNDPD--HSWVAMHES-WNGGV--NDNWLPAQAKTRSAAHTPTVM 158
Query: 141 KGFSAEAVPVYAALIREFALYDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKKLL----- 195
++ + +P++ L F + DR+F S+ GPT PNRL+ SAT + L
Sbjct: 159 GYYTRQDIPIHYLLADAFTVCDRYFCSVLGPTLPNRLYWLSATIDPDGQNGGPELQSPTF 218
Query: 196 --AQGYPQKTIFDSLHENGIDFGIY----FQTIPSTLFYRNL-----------RKLKYIF 238
+ + + + +L + G+ + +Y I S L Y +L L
Sbjct: 219 QPVRRFGWRIMPQNLSDAGVSWKVYRNKTLGPISSVLTYGSLVTSFKQSADPRSDLVRFG 278
Query: 239 KFHQYDLKFKRDARKGNLPSLTVIEPRYFDLKGFPANDDHPSHDVANGQKLVKEVYETLR 298
Y F D LP ++ + P + +HP+ A G + + L
Sbjct: 279 VAPSYPASFAADVLANRLPRVSWVIPNVLE-------SEHPAVPAAAGAFAIVNILRILL 331
Query: 299 ASPQ-WNETLLVITYDEHGGFYDHV-------ETP--YVNVPNPD------GNTGPAPSF 342
A+P W +T L+++YDE+GGF+DHV TP YV VP+ D G GP
Sbjct: 332 ANPAVWEKTALIVSYDENGGFFDHVVPATAPAGTPGEYVTVPDIDQVPGSGGIRGPI--- 388
Query: 343 FKFDRLGVRVPTIMVSPWIKKGTVMSGPKGPTPNSEFEHSSIPATIKKMFNLSSNFLTHR 402
LG RVP ++SP+ + GP+ + F+H+S ++ F + LT
Sbjct: 389 ----GLGFRVPCFVISPYSR------GPQ--MVHDTFDHTSQLRLLETRFGVPVPNLT-- 434
Query: 403 DAWAGTFEEVVGQLTS 418
AW V G +TS
Sbjct: 435 -AWR---RSVTGDMTS 446
>sp|P0A5R9|PHLD_MYCBO Phospholipase C 4 OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=plcD PE=3 SV=1
Length = 514
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 179/436 (41%), Gaps = 95/436 (21%)
Query: 39 IKTIVVLVMENRSFDHMLG--------------WMKKAINPRINGVTGNECNSV----ST 80
I+ V + ENRSFDH G + +K NP + +T
Sbjct: 50 IEHFVFFMQENRSFDHYFGTLSGTDGFNTVSPLFQQKGWNPMTQALDATGVTMPYRFDTT 109
Query: 81 KTPKSQTICFTDDAEFVDPDPGHSFEAVEQQVFGSGVIPSMSGFVEQALSMSPNLSETVM 140
+ P F D A DPD HS+ A+ + + GV + + QA + S + TVM
Sbjct: 110 RGP------FLDGACVNDPD--HSWVAMHES-WNGGV--NDNWLPAQAKTRSAAHTPTVM 158
Query: 141 KGFSAEAVPVYAALIREFALYDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKKLL----- 195
++ + +P++ L F + DR+F S+ GPT PNRL+ SAT + L
Sbjct: 159 GYYTRQDIPIHYLLADAFTVCDRYFCSVLGPTLPNRLYWLSATIDPDGQNGGPELQSPTF 218
Query: 196 --AQGYPQKTIFDSLHENGIDFGIY----FQTIPSTLFYRNL-----------RKLKYIF 238
+ + + + +L + G+ + +Y I S L Y +L L
Sbjct: 219 QPVRRFGWRIMPQNLSDAGVSWKVYRNKTLGPISSVLTYGSLVTSFKQSADPRSDLVRFG 278
Query: 239 KFHQYDLKFKRDARKGNLPSLTVIEPRYFDLKGFPANDDHPSHDVANGQKLVKEVYETLR 298
Y F D LP ++ + P + +HP+ A G + + L
Sbjct: 279 VAPSYPASFAADVLANRLPRVSWVIPNVLE-------SEHPAVPAAAGAFAIVNILRILL 331
Query: 299 ASPQ-WNETLLVITYDEHGGFYDHV-------ETP--YVNVPNPD------GNTGPAPSF 342
A+P W +T L+++YDE+GGF+DHV TP YV VP+ D G GP
Sbjct: 332 ANPAVWEKTALIVSYDENGGFFDHVVPATAPAGTPGEYVTVPDIDQVPGSGGIRGPI--- 388
Query: 343 FKFDRLGVRVPTIMVSPWIKKGTVMSGPKGPTPNSEFEHSSIPATIKKMFNLSSNFLTHR 402
LG RVP ++SP+ + GP+ + F+H+S ++ F + LT
Sbjct: 389 ----GLGFRVPCFVISPYSR------GPQ--MVHDTFDHTSQLRLLETRFGVPVPNLT-- 434
Query: 403 DAWAGTFEEVVGQLTS 418
AW V G +TS
Sbjct: 435 -AWR---RSVTGDMTS 446
>sp|Q9RGS8|PHLN_BURPS Non-hemolytic phospholipase C OS=Burkholderia pseudomallei (strain
K96243) GN=plcN PE=1 SV=2
Length = 700
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 181/461 (39%), Gaps = 102/461 (22%)
Query: 39 IKTIVVLVMENRSFDHMLGWMKKAINPRINGVTG-NECNSVSTKTPKS-----------Q 86
++ IV+L+ ENRSFDH G ++ GV G + ++ + KS +
Sbjct: 47 VEHIVILMQENRSFDHYFG--------KLRGVRGFGDPRPLALQNGKSVFHQPVLLGPAE 98
Query: 87 TICFTDDAEFVDPDPGHSFEAVEQQVFGSGVIPSMSGFVEQALSMSPNLSETVMKGFSAE 146
+ F DA + Q + G+ G ++ ++ N T M +
Sbjct: 99 LLPFHPDASNLGMQFLQDLPHGWQDMHGA----WNKGRYDRWIA---NKGTTTMAYLERD 151
Query: 147 AVPVYAALIREFALYDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKKLLAQ---GYPQKT 203
+P + L F + D + SIP T PNR ++++ + +L GY T
Sbjct: 152 DIPFHYQLADAFTICDAYHCSIPSSTDPNRYYMWTGYVGNDGAGGGPVLGNEEAGYGWST 211
Query: 204 IFDSLHENGIDFGIYFQTIPSTL-------FYRNLRKLKY----IFKFHQYDLK------ 246
++L + G+ + IY Q I + L + +N Y + F+QY
Sbjct: 212 YPETLEQAGVSWKIY-QDIGTGLDAAGSWGWTQNPYIGNYGDNSLLYFNQYRNAQPGSPL 270
Query: 247 -------------------FKRDARKGNLPSLTVI-EPRYFDLKGFPANDDHPSHDVANG 286
++D + G LP ++ I P A +HP+ G
Sbjct: 271 YDKARTGTNVSAGGTLFDVLQQDVKNGTLPQVSWICAPE--------AYSEHPNWPANYG 322
Query: 287 QKLVKEVYETLRASPQ-WNETLLVITYDEHGGFYDHVETPYVNVPNPDG--NTGPAPSFF 343
V++V + L ++P W++T L ITYDE+ GF+DHV P+ +G A F
Sbjct: 323 AWYVEQVLKALTSNPDVWSKTALFITYDENDGFFDHVAPPFAPQSRENGLSTVSTAGEIF 382
Query: 344 KFDR--------LGVRVPTIMVSPWIKKGTVMSGPKGPTPNSEFEHSSIPATIKKMFN-- 393
D LG RVP ++VSPW K G V S F+H+S+ I+ FN
Sbjct: 383 AGDATHMAGPYGLGPRVPMLVVSPWTKGGWVCS--------QTFDHTSLLQFIEARFNDR 434
Query: 394 ---LSSNFLTHRDAWAGTFEEVVGQLTSPRTDCPETLPDVA 431
+ N R A G +SP P+ LPD +
Sbjct: 435 YSVRAPNVTPWRRAVCGDLTSAF-NFSSPDGSWPQ-LPDTS 473
>sp|P95246|PHLB_MYCTU Phospholipase C 2 OS=Mycobacterium tuberculosis GN=plcB PE=1 SV=2
Length = 521
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 172/435 (39%), Gaps = 89/435 (20%)
Query: 39 IKTIVVLVMENRSFDHMLGWMKKA-----INPRINGVTGNECNSVSTKTPKSQTICFTDD 93
I+ IV+L+ ENRSFDH G + P + P T+ + D
Sbjct: 52 IEHIVLLMQENRSFDHYFGTLSDTRGFDDTTPPVVFAQSGWNPMTQAVDPAGVTLPYRFD 111
Query: 94 --------AEFVDPDPGHSFEAVEQQVFGSGVIPSMSGFVEQALSMSP---NLSETVMKG 142
E V+ DP HS+ + G + ++ + SP N+ T M
Sbjct: 112 TTRGPLVAGECVN-DPDHSWIGMHNSWNGG----ANDNWLPAQVPFSPLQGNVPVT-MGF 165
Query: 143 FSAEAVPVYAALIREFALYDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKKLLA------ 196
++ +P++ L F + D +F S+ G T PNRL+ SA + +L
Sbjct: 166 YTRRDLPIHYLLADTFTVCDGYFCSLLGGTTPNRLYWMSAWIDPDGTDGGPVLIEPNIQP 225
Query: 197 -QGYPQKTIFDSLHENGIDFGIYFQTIPSTLFYRNLRKLKYIFKFHQ------------- 242
Q Y + + ++L + G+ + +Y + L + + F Q
Sbjct: 226 LQHYSWRIMPENLEDAGVSWKVYQNKLLGALNNTVVGYNGLVNDFKQAADPRSNLARFGI 285
Query: 243 ---YDLKFKRDARKGNLPSLTVIEPRYFDLKGFPANDDHPSHDVANGQKLVKEVYETLRA 299
Y L F D R LP ++ + P + +HP+ V G + + L +
Sbjct: 286 SPTYPLDFAADVRNNRLPKVSWVLPGFL-------LSEHPAFPVNVGAVAIVDALRILLS 338
Query: 300 SPQ-WNETLLVITYDEHGGFYDH--------------VETPYVN-VPNPDGNTGPAPSFF 343
+P W +T L++ YDE+GGF+DH V P ++ VP G GP
Sbjct: 339 NPAVWEKTALIVNYDENGGFFDHVVPPTPPPGTPGEFVTVPDIDSVPGSGGIRGPI---- 394
Query: 344 KFDRLGVRVPTIMVSPWIKKGTVMSGPKGPTPNSEFEHSSIPATIKKMFNLSSNFLTHRD 403
LG RVP +++SP+ +G +M + F+H+S I+ F + LT
Sbjct: 395 ---GLGFRVPCLVISPY-SRGPLMV-------HDTFDHTSTLKLIRARFGVPVPNLT--- 440
Query: 404 AWAGTFEEVVGQLTS 418
AW + VG +TS
Sbjct: 441 AWR---DATVGDMTS 452
>sp|Q04001|PHLA_MYCTU Phospholipase C 1 OS=Mycobacterium tuberculosis GN=plcA PE=1 SV=3
Length = 520
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 170/425 (40%), Gaps = 72/425 (16%)
Query: 39 IKTIVVLVMENRSFDHMLGWMK-----KAINPRINGVTGNECNSVSTKTPKSQTICF--- 90
I+ IV+L+ ENRSFDH G + A +P + N P TI F
Sbjct: 51 IEHIVLLMQENRSFDHYFGTLSSTNGFNAASPAFQQMGWNPM--TQALDPAGVTIPFRLD 108
Query: 91 TDDAEFVDP----DPGHSFEAVEQQVFGSGVIPSMSGFVEQALSMSPNLSETVMKGFSAE 146
T F+D DP H + + G + + QA + + M ++ +
Sbjct: 109 TTRGPFLDGECVNDPEHQWVGMHLAWNGGA---NDNWLPAQATTRAGPYVPLTMGYYTRQ 165
Query: 147 AVPVYAALIREFALYDRWFSSIPGPTQPNRLFVYSAT-----SHGSTSHVKK--LLAQGY 199
+P++ L F + D + S+ T PNRL+ SA + G V+ L Q +
Sbjct: 166 DIPIHYLLADTFTICDGYHCSLLTGTLPNRLYWLSANIDPAGTDGGPQLVEPGFLPLQQF 225
Query: 200 PQKTIFDSLHENGIDFGIYFQTIPSTLFYRNLRKLKYIFKFHQ----------------Y 243
+ + ++L + G+ + +Y + + F Q Y
Sbjct: 226 SWRIMPENLEDAGVSWKVYQNKGLGRFINTPISNNGLVQAFRQAADPRSNLARYGIAPTY 285
Query: 244 DLKFKRDARKGNLPSLTVIEPRYFDLKGFPANDDHPSHDVANGQKLVKEVYETLRASPQ- 302
F D R LP ++ + P +HP+ VA G + L ++P
Sbjct: 286 PGDFAADVRANRLPKVSWLVPNIL-------QSEHPALPVALGAVSMVTALRILLSNPAV 338
Query: 303 WNETLLVITYDEHGGFYDHVETP---------YVNVPNPDGNTGPAPSFFKFDRLGVRVP 353
W +T L+++YDE+GGF+DHV P +V VPN D G LG RVP
Sbjct: 339 WEKTALIVSYDENGGFFDHVTPPTAPPGTPGEFVTVPNIDAVPGSGGIRGPLG-LGFRVP 397
Query: 354 TIMVSPWIKKGTVMSGPKGPTPNSEFEHSSIPATIKKMFNLSSNFLTHRDAWAGTFEEVV 413
I++SP+ +G +M + F+H+S I+ F + +T AW + VV
Sbjct: 398 CIVISPY-SRGPLMV-------SDTFDHTSQLKLIRARFGVPVPNMT---AWR---DGVV 443
Query: 414 GQLTS 418
G +TS
Sbjct: 444 GDMTS 448
>sp|P15713|PHLN_PSEAE Non-hemolytic phospholipase C OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=plcN
PE=3 SV=2
Length = 692
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 176/428 (41%), Gaps = 84/428 (19%)
Query: 39 IKTIVVLVMENRSFDHMLGWMK--KAINPRINGVTGNECNSVSTKTPKSQTICF-----T 91
++ +V+L+ ENRSFDH G +K + R+ + K K + + + T
Sbjct: 48 VEHVVILMQENRSFDHYFGTLKGVRGFGDRMAIPLPDGQRVWHQKGSKGEILPYHFDTST 107
Query: 92 DDAEFVDPDPGHSFEAVEQQVFGSGVIPSMSGFVEQALSMSPNLSETVMKGFSAEAVPVY 151
A+ VD P H++ QQ + G M ++ P +E + + + +
Sbjct: 108 TSAQRVDGTP-HTWPDA-QQAWNEG---RMDKWL-------PAKTERSLGYYKEQDIAFQ 155
Query: 152 AALIREFALYDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKKL----------LAQGYPQ 201
A+ F + D + S G T PNRLF+++ T+ H + + QGY
Sbjct: 156 FAMANAFTICDAYHCSFQGGTNPNRLFLWTGTNDPLGQHGGPVTTNDHDSNGPVEQGYTW 215
Query: 202 KTIFDSLHENGIDFGIY------FQTIPSTLFYRNLRKLK-----YIFKFHQYDLK-FKR 249
T + L GI + +Y F P + +R R + + L KR
Sbjct: 216 TTYPERLQAAGITWRVYQDMADNFSDNP-LIGFRQYRAAAPDSPLIVNGLSTWKLDALKR 274
Query: 250 DARKGNLPSLT-VIEP-RYFDLKGFPANDDHPSHDVANGQKLVKEVYETLRASPQ-WNET 306
D +LP ++ ++ P +Y + G PS + G + V + L A+P+ W++T
Sbjct: 275 DVLANSLPQVSWIVAPAKYSEHPG-------PSSPIW-GAEYTSWVLDALTANPEVWSKT 326
Query: 307 LLVITYDEHGGFYDHVETPYVNVPNPDG---NTGPAPSFFKFDR------------LGVR 351
L++ +DE+ GF+DHV P N DG A + ++ LG R
Sbjct: 327 ALLVMFDENDGFFDHVAPPAAPSLNKDGTLRGKTTADATLEWHTKGDIRYRNQPYGLGPR 386
Query: 352 VPTIMVSPWIKKGTVMSGPKGPTPNSEFEHSSIPATIKKMFN-LSSNFLTHRDAWAGTFE 410
VP ++SPW K G V S F+H+S+ +++ F + N R A
Sbjct: 387 VPMYVISPWSKGGWVNS--------QVFDHTSVIRFLEQRFGVMEPNISPWRRA------ 432
Query: 411 EVVGQLTS 418
V G LTS
Sbjct: 433 -VCGDLTS 439
>sp|P06200|PHLC_PSEAE Hemolytic phospholipase C OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=plcH PE=3
SV=2
Length = 730
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 186/481 (38%), Gaps = 115/481 (23%)
Query: 39 IKTIVVLVMENRSFDHMLGWMKKAINPRINGVTG-NECNSVSTKTPKSQTICFTD-DAEF 96
++ +V+L+ ENRSFDH G +NGV G N+ ++ K + + + + EF
Sbjct: 51 VQHVVILMQENRSFDHYFG--------HLNGVRGFNDPRAL--KRQDGKPVWYQNYKYEF 100
Query: 97 VDPDPGHSFEAVEQQVFGSGVIPSMSGF---VEQALS---MSPNLSETVMKGFSAEAVPV 150
P H V + S S F Q + M+ E M F +P
Sbjct: 101 ---SPYHWDTKVTSAQWVSSQNHEWSAFHAIWNQGRNDKWMAVQYPE-AMGYFKRGDIPY 156
Query: 151 YAALIREFALYDRWFSSIPGPTQPNRLFVYSA----TSHGSTSHVKKLLAQG-------- 198
Y AL F L + + S+ GPT PNRL+ S + G H+ + G
Sbjct: 157 YYALADAFTLCEAYHQSMMGPTNPNRLYHMSGRAAPSGDGKDVHIGNDMGDGTIGASGTV 216
Query: 199 ----YPQKTIFDSLHENGIDFGIYFQT--IPSTLFY------------------------ 228
YP++ L G+D+ +Y + S+L+Y
Sbjct: 217 DWTTYPER-----LSAAGVDWRVYQEGGYRSSSLWYLYVDAYWKYRLQEQNNYDCNALAW 271
Query: 229 -RNLRKLKYIFKFHQYDL------KFKRDARKGNLPSLTVIEPRYFDLKGFPANDDHPSH 281
RN + Q + + ++D ++ LP ++ I Y +HP
Sbjct: 272 FRNFKNAPRDSDLWQRAMLARGVDQLRKDVQENTLPQVSWIVAPYCYC-------EHPWW 324
Query: 282 DVANGQKLVKEVYETLRASPQ-WNETLLVITYDEHGGFYDHVETPYVNVPNPDG---NTG 337
+ G+ V V E L ++P+ W T+ ++ YDE GFYDH P P DG +T
Sbjct: 325 GPSFGEYYVTRVLEALTSNPEVWARTVFILNYDEGDGFYDHASAPV--PPWKDGVGLSTV 382
Query: 338 PAPSFFKFDR-----LGVRVPTIMVSPWIKKGTVMSGPKGPTPNSEFEHSSIPATIKKMF 392
+ LG RVP I +SPW K G V + F+H+S+ +++ F
Sbjct: 383 STAGEIEVSSGLPIGLGHRVPLIAISPWSKGGKVSA--------EVFDHTSVLRFLERRF 434
Query: 393 N-LSSNFLTHRDAWAGTFEEVVGQLTS----PRTDCPETLPDVAPLRKTEA-KEDGGLSE 446
+ N R A V G LTS + PD+ + +++A KED +
Sbjct: 435 GVVEENISPWRRA-------VCGDLTSLFDFQGAGDTQVAPDLTNVPQSDARKEDAYWQQ 487
Query: 447 F 447
F
Sbjct: 488 F 488
>sp|D1A8M1|MSHB_THECD 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Thermomonospora curvata (strain ATCC
19995 / DSM 43183 / JCM 3096 / NCIMB 10081) GN=mshB PE=3
SV=1
Length = 297
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 14/77 (18%)
Query: 269 LKGFPANDDHPS----HDVANGQKLVKEVYETLRASPQWNETLLVITYDEHG--GFYDHV 322
+ G P+ND HP DV +L+ E+ +R PQ +++TYDEHG G DH+
Sbjct: 99 MMGAPSND-HPRCFWRADVEEAARLLAEIIREVR--PQ-----VIVTYDEHGHYGHPDHI 150
Query: 323 ETPYVNVPNPDGNTGPA 339
+ V V + PA
Sbjct: 151 QAHRVTVRARELAADPA 167
>sp|P27000|SYE_THET8 Glutamate--tRNA ligase OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=gltX PE=1 SV=2
Length = 468
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 258 SLTVIEPRYFDLKGFPAN------DDHPSHDVAN-----GQKLVKEVYETLRASPQWNET 306
++ ++ PR+ LK FP +D+P + A G L+KE+Y LRA +W E
Sbjct: 351 AVELMRPRFDTLKEFPEKARYLFTEDYPVSEKAQRKLEEGLPLLKELYPRLRAQEEWTEA 410
Query: 307 LL 308
L
Sbjct: 411 AL 412
>sp|P30624|LCF1_YEAST Long-chain-fatty-acid--CoA ligase 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=FAA1 PE=1 SV=1
Length = 700
Score = 32.3 bits (72), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 13/95 (13%)
Query: 171 PTQPNRLFVYSATSHGSTSHVKKLLAQGYPQKTIFDSLHENGIDFGIYFQTIPSTLFYRN 230
P ++L +Y+ATSH +QG P T +D+L E G+ + QT +F N
Sbjct: 123 PNDDDKLHLYAATSHKWMKMFLGAQSQGIPVVTAYDTLGEKGLIHSL-VQTGSKAIFTDN 181
Query: 231 ------------LRKLKYIFKFHQYDLKFKRDARK 253
+ +KYI F + +R + K
Sbjct: 182 SLLPSLIKPVQAAQDVKYIIHFDSISSEDRRQSGK 216
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 201,645,626
Number of Sequences: 539616
Number of extensions: 8897305
Number of successful extensions: 19834
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 19800
Number of HSP's gapped (non-prelim): 21
length of query: 523
length of database: 191,569,459
effective HSP length: 122
effective length of query: 401
effective length of database: 125,736,307
effective search space: 50420259107
effective search space used: 50420259107
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)