Query 009881
Match_columns 523
No_of_seqs 372 out of 1773
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 15:04:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009881.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009881hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vg0_A RAB proteins geranylger 100.0 6.3E-60 2.1E-64 512.7 45.6 440 20-510 6-579 (650)
2 3p1w_A Rabgdi protein; GDI RAB 100.0 1.5E-55 5.1E-60 466.2 39.4 378 19-444 17-404 (475)
3 2bcg_G Secretory pathway GDP d 100.0 8E-41 2.8E-45 355.4 38.9 376 20-443 9-387 (453)
4 1d5t_A Guanine nucleotide diss 100.0 3.4E-39 1.2E-43 340.9 36.7 370 20-443 4-376 (433)
5 4dgk_A Phytoene dehydrogenase; 100.0 8.1E-30 2.8E-34 273.6 30.2 343 23-426 2-377 (501)
6 3nrn_A Uncharacterized protein 99.9 6.4E-23 2.2E-27 215.1 26.2 332 23-445 1-340 (421)
7 3ka7_A Oxidoreductase; structu 99.9 2.8E-22 9.7E-27 210.1 29.8 336 23-444 1-355 (425)
8 2ivd_A PPO, PPOX, protoporphyr 99.9 3.1E-22 1.1E-26 213.3 25.7 328 22-423 16-373 (478)
9 1s3e_A Amine oxidase [flavin-c 99.9 1.5E-21 5.2E-26 210.4 24.1 296 21-377 3-306 (520)
10 2yg5_A Putrescine oxidase; oxi 99.9 5.7E-21 2E-25 202.0 25.1 292 20-376 3-305 (453)
11 3i6d_A Protoporphyrinogen oxid 99.9 3.8E-21 1.3E-25 203.8 23.1 348 22-444 5-393 (470)
12 1sez_A Protoporphyrinogen oxid 99.9 1.6E-20 5.4E-25 201.4 24.8 360 21-444 12-419 (504)
13 3nks_A Protoporphyrinogen oxid 99.9 8.2E-21 2.8E-25 202.0 22.1 329 23-423 3-369 (477)
14 3lov_A Protoporphyrinogen oxid 99.9 2.9E-20 9.8E-25 197.9 25.3 328 20-422 2-363 (475)
15 4gde_A UDP-galactopyranose mut 99.9 1.9E-21 6.5E-26 208.6 15.4 244 22-333 10-271 (513)
16 2vvm_A Monoamine oxidase N; FA 99.9 4.6E-21 1.6E-25 205.2 18.1 295 23-376 40-349 (495)
17 4dsg_A UDP-galactopyranose mut 99.8 3.1E-19 1.1E-23 190.7 16.8 343 21-445 8-377 (484)
18 1rsg_A FMS1 protein; FAD bindi 99.8 9.9E-18 3.4E-22 180.5 17.2 278 20-378 6-307 (516)
19 1b37_A Protein (polyamine oxid 99.7 1.3E-16 4.6E-21 169.6 23.3 287 21-379 3-312 (472)
20 3k7m_X 6-hydroxy-L-nicotine ox 99.7 1.3E-16 4.5E-21 167.3 20.2 284 23-376 2-296 (431)
21 2b9w_A Putative aminooxidase; 99.7 1.6E-16 5.4E-21 166.4 18.6 247 21-333 5-253 (424)
22 2iid_A L-amino-acid oxidase; f 99.7 4.5E-16 1.5E-20 166.5 21.1 284 21-376 32-335 (498)
23 2jae_A L-amino acid oxidase; o 99.7 4.3E-16 1.5E-20 166.3 16.9 299 21-376 10-331 (489)
24 3hdq_A UDP-galactopyranose mut 99.6 3E-14 1E-18 147.5 19.3 309 19-441 26-352 (397)
25 1v0j_A UDP-galactopyranose mut 99.6 5.9E-16 2E-20 161.2 6.1 301 21-424 6-317 (399)
26 2e1m_A L-glutamate oxidase; L- 99.6 5.4E-14 1.8E-18 144.6 20.3 47 20-66 42-89 (376)
27 1i8t_A UDP-galactopyranose mut 99.6 3.4E-15 1.2E-19 153.8 9.2 226 22-333 1-230 (367)
28 2bi7_A UDP-galactopyranose mut 99.5 1.2E-14 4.1E-19 150.6 8.6 214 21-305 2-223 (384)
29 4gut_A Lysine-specific histone 99.5 6.5E-13 2.2E-17 148.7 20.2 99 271-377 526-625 (776)
30 2z3y_A Lysine-specific histone 99.4 4.1E-12 1.4E-16 140.6 19.3 102 270-379 392-502 (662)
31 2xag_A Lysine-specific histone 99.4 6.2E-12 2.1E-16 141.8 20.7 102 270-379 563-673 (852)
32 3ayj_A Pro-enzyme of L-phenyla 99.4 1.8E-12 6.2E-17 142.6 12.1 61 271-333 339-409 (721)
33 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 2.5E-11 8.5E-16 123.1 18.5 99 272-376 105-204 (342)
34 3dme_A Conserved exported prot 99.1 3.9E-10 1.3E-14 114.6 13.9 61 271-333 139-204 (369)
35 3dje_A Fructosyl amine: oxygen 99.1 1.1E-09 3.8E-14 114.7 16.0 61 271-333 149-216 (438)
36 3ps9_A TRNA 5-methylaminomethy 99.0 2.4E-09 8.3E-14 118.7 15.5 60 271-333 406-468 (676)
37 3nyc_A D-arginine dehydrogenas 99.0 4.8E-09 1.6E-13 107.2 16.2 59 271-333 143-204 (381)
38 3kkj_A Amine oxidase, flavin-c 99.0 2.1E-10 7.2E-15 109.7 5.2 44 23-66 3-46 (336)
39 4at0_A 3-ketosteroid-delta4-5a 99.0 1.3E-08 4.5E-13 109.0 18.1 42 21-62 40-81 (510)
40 3pvc_A TRNA 5-methylaminomethy 98.9 6E-09 2.1E-13 115.8 15.2 60 271-333 401-464 (689)
41 2gag_B Heterotetrameric sarcos 98.9 3.8E-08 1.3E-12 101.5 18.6 60 271-333 163-225 (405)
42 1qo8_A Flavocytochrome C3 fuma 98.9 3.7E-08 1.3E-12 106.9 18.8 59 272-332 240-306 (566)
43 1y0p_A Fumarate reductase flav 98.9 7.9E-08 2.7E-12 104.4 20.6 60 272-332 245-311 (571)
44 1y56_B Sarcosine oxidase; dehy 98.9 3.1E-08 1.1E-12 101.5 16.5 60 271-333 138-200 (382)
45 2i0z_A NAD(FAD)-utilizing dehy 98.9 1.5E-08 5.3E-13 106.6 14.3 60 271-332 125-185 (447)
46 3v76_A Flavoprotein; structura 98.9 1.3E-08 4.6E-13 106.1 13.6 58 271-332 124-181 (417)
47 3nlc_A Uncharacterized protein 98.7 3.7E-08 1.3E-12 106.0 11.3 53 279-333 220-272 (549)
48 1pj5_A N,N-dimethylglycine oxi 98.7 2.1E-07 7.1E-12 105.6 18.1 60 271-333 140-202 (830)
49 3oz2_A Digeranylgeranylglycero 98.7 8.6E-09 2.9E-13 105.5 4.9 42 20-61 2-43 (397)
50 1d4d_A Flavocytochrome C fumar 98.6 9.5E-07 3.2E-11 95.9 18.4 52 279-332 255-311 (572)
51 3fpz_A Thiazole biosynthetic e 98.5 5.3E-08 1.8E-12 98.0 4.9 42 22-63 65-108 (326)
52 1yvv_A Amine oxidase, flavin-c 98.5 7.8E-08 2.7E-12 96.5 5.2 43 23-65 3-45 (336)
53 4fk1_A Putative thioredoxin re 98.5 9.1E-08 3.1E-12 95.1 4.8 41 19-60 3-43 (304)
54 4gcm_A TRXR, thioredoxin reduc 98.4 1.2E-07 4.1E-12 94.4 5.2 42 21-63 5-46 (312)
55 3itj_A Thioredoxin reductase 1 98.4 1.2E-07 3.9E-12 95.1 4.7 56 9-64 9-68 (338)
56 3o0h_A Glutathione reductase; 98.4 1.6E-07 5.6E-12 99.8 4.2 52 279-333 232-283 (484)
57 3cgv_A Geranylgeranyl reductas 98.4 2.1E-07 7.3E-12 95.5 4.9 42 20-61 2-43 (397)
58 1ryi_A Glycine oxidase; flavop 98.3 3E-07 1E-11 94.0 5.5 59 271-333 153-214 (382)
59 4a9w_A Monooxygenase; baeyer-v 98.3 2.8E-07 9.4E-12 92.8 4.8 44 20-63 1-44 (357)
60 3rp8_A Flavoprotein monooxygen 98.3 3.4E-07 1.2E-11 94.7 5.1 46 14-59 15-60 (407)
61 3lxd_A FAD-dependent pyridine 98.3 1.8E-05 6.3E-10 82.0 17.9 57 278-336 193-249 (415)
62 3cty_A Thioredoxin reductase; 98.3 4.5E-07 1.5E-11 90.4 5.1 42 21-63 15-56 (319)
63 3urh_A Dihydrolipoyl dehydroge 98.3 3E-07 1E-11 97.8 4.0 50 14-64 18-67 (491)
64 2oln_A NIKD protein; flavoprot 98.3 5E-07 1.7E-11 93.0 5.4 59 271-333 142-203 (397)
65 2gqf_A Hypothetical protein HI 98.3 3E-07 1E-11 95.4 3.5 59 272-332 102-162 (401)
66 4a5l_A Thioredoxin reductase; 98.3 4.7E-07 1.6E-11 89.9 4.6 36 21-56 3-38 (314)
67 2zbw_A Thioredoxin reductase; 98.3 4.1E-07 1.4E-11 91.3 4.1 44 20-63 3-46 (335)
68 3da1_A Glycerol-3-phosphate de 98.3 5.3E-07 1.8E-11 97.6 5.1 60 271-332 160-226 (561)
69 3l8k_A Dihydrolipoyl dehydroge 98.2 3.9E-07 1.3E-11 96.4 3.7 43 21-63 3-45 (466)
70 1rp0_A ARA6, thiazole biosynth 98.2 7E-07 2.4E-11 88.0 5.3 41 21-61 38-79 (284)
71 3fg2_P Putative rubredoxin red 98.2 3.7E-05 1.3E-09 79.4 18.7 56 278-335 183-238 (404)
72 3ab1_A Ferredoxin--NADP reduct 98.2 4.9E-07 1.7E-11 91.8 4.2 45 19-63 11-55 (360)
73 2uzz_A N-methyl-L-tryptophan o 98.2 7.2E-07 2.5E-11 90.8 5.1 59 271-333 138-199 (372)
74 4ap3_A Steroid monooxygenase; 98.2 6E-07 2E-11 96.9 4.6 48 18-65 17-64 (549)
75 1c0p_A D-amino acid oxidase; a 98.2 1.1E-06 3.6E-11 89.5 6.1 40 20-59 4-43 (363)
76 3c96_A Flavin-containing monoo 98.2 9E-07 3.1E-11 91.8 5.5 44 20-63 2-46 (410)
77 2gjc_A Thiazole biosynthetic e 98.2 1.5E-06 5.2E-11 87.0 6.8 40 22-61 65-106 (326)
78 3lzw_A Ferredoxin--NADP reduct 98.2 6.6E-07 2.3E-11 89.2 3.9 43 21-63 6-48 (332)
79 2gv8_A Monooxygenase; FMO, FAD 98.2 1.2E-06 4.2E-11 91.9 6.1 43 21-63 5-49 (447)
80 3nix_A Flavoprotein/dehydrogen 98.2 1E-06 3.6E-11 91.3 5.5 53 279-332 106-160 (421)
81 3k30_A Histamine dehydrogenase 98.2 1.3E-06 4.4E-11 97.0 6.5 45 19-63 388-432 (690)
82 3f8d_A Thioredoxin reductase ( 98.2 1.1E-06 3.6E-11 87.3 5.2 40 22-63 15-54 (323)
83 3jsk_A Cypbp37 protein; octame 98.2 1E-06 3.5E-11 88.8 5.0 40 22-61 79-120 (344)
84 1w4x_A Phenylacetone monooxyge 98.2 1.1E-06 3.6E-11 94.8 5.5 45 19-63 13-57 (542)
85 2gf3_A MSOX, monomeric sarcosi 98.2 1.3E-06 4.3E-11 89.5 5.7 51 279-333 150-200 (389)
86 4dna_A Probable glutathione re 98.2 7.5E-07 2.6E-11 94.0 4.1 52 279-333 211-263 (463)
87 2xdo_A TETX2 protein; tetracyc 98.2 1.4E-06 4.8E-11 89.9 5.9 41 20-60 24-64 (398)
88 3alj_A 2-methyl-3-hydroxypyrid 98.2 1.4E-06 4.6E-11 89.3 5.7 42 20-61 9-50 (379)
89 3i3l_A Alkylhalidase CMLS; fla 98.2 1.6E-06 5.4E-11 94.4 6.3 52 279-332 128-182 (591)
90 2qcu_A Aerobic glycerol-3-phos 98.2 1.3E-06 4.6E-11 93.1 5.6 51 279-332 149-204 (501)
91 3lad_A Dihydrolipoamide dehydr 98.2 1.2E-06 4.1E-11 92.8 5.2 41 21-61 2-42 (476)
92 3c4n_A Uncharacterized protein 98.1 1.2E-06 4.2E-11 90.7 4.9 40 21-60 35-76 (405)
93 2vdc_G Glutamate synthase [NAD 98.1 1.8E-06 6E-11 91.1 6.1 45 18-62 118-162 (456)
94 2vou_A 2,6-dihydroxypyridine h 98.1 2E-06 6.8E-11 88.7 6.1 38 20-57 3-40 (397)
95 3r9u_A Thioredoxin reductase; 98.1 1.3E-06 4.4E-11 86.4 4.4 42 21-63 3-45 (315)
96 1mo9_A ORF3; nucleotide bindin 98.1 1.9E-06 6.4E-11 92.5 5.9 45 19-63 40-84 (523)
97 2q7v_A Thioredoxin reductase; 98.1 1.5E-06 5.1E-11 86.8 4.8 42 21-63 7-48 (325)
98 2cul_A Glucose-inhibited divis 98.1 1.7E-06 5.7E-11 82.6 4.9 35 21-55 2-36 (232)
99 3axb_A Putative oxidoreductase 98.1 1.3E-06 4.5E-11 91.5 4.5 62 271-333 170-249 (448)
100 3d1c_A Flavin-containing putat 98.1 1.1E-06 3.9E-11 89.1 3.9 44 20-64 2-46 (369)
101 3dk9_A Grase, GR, glutathione 98.1 9.9E-07 3.4E-11 93.5 3.3 44 19-63 17-60 (478)
102 1dxl_A Dihydrolipoamide dehydr 98.1 1.8E-06 6.3E-11 91.1 5.0 44 20-63 4-47 (470)
103 3dgz_A Thioredoxin reductase 2 98.1 1.9E-06 6.5E-11 91.6 4.9 45 20-64 4-56 (488)
104 3qfa_A Thioredoxin reductase 1 98.1 2.1E-06 7.1E-11 92.1 5.2 44 21-64 31-82 (519)
105 3uox_A Otemo; baeyer-villiger 98.1 2.1E-06 7.1E-11 92.6 5.2 46 20-65 7-52 (545)
106 2a87_A TRXR, TR, thioredoxin r 98.1 2E-06 6.9E-11 86.4 4.7 44 19-63 11-54 (335)
107 2qae_A Lipoamide, dihydrolipoy 98.1 1.6E-06 5.6E-11 91.5 4.1 42 22-63 2-43 (468)
108 1v59_A Dihydrolipoamide dehydr 98.1 1.1E-06 3.8E-11 93.1 2.8 43 21-63 4-46 (478)
109 1zmd_A Dihydrolipoyl dehydroge 98.1 1.5E-06 5.2E-11 91.9 3.8 44 20-63 4-47 (474)
110 3pl8_A Pyranose 2-oxidase; sub 98.1 2.7E-06 9.3E-11 93.1 5.7 42 21-62 45-86 (623)
111 2wdq_A Succinate dehydrogenase 98.1 1.9E-06 6.3E-11 93.8 4.3 53 279-332 143-200 (588)
112 2yqu_A 2-oxoglutarate dehydrog 98.1 1.8E-06 6E-11 90.9 4.0 42 22-63 1-42 (455)
113 3ic9_A Dihydrolipoamide dehydr 98.1 1.5E-06 5.3E-11 92.4 3.5 40 22-62 8-47 (492)
114 3e1t_A Halogenase; flavoprotei 98.0 2.7E-06 9.2E-11 91.0 5.3 52 279-332 111-166 (512)
115 3gwf_A Cyclohexanone monooxyge 98.0 2E-06 6.8E-11 92.6 4.3 46 20-65 6-52 (540)
116 2x3n_A Probable FAD-dependent 98.0 2.7E-06 9.2E-11 87.7 5.0 52 279-332 107-160 (399)
117 3ihg_A RDME; flavoenzyme, anth 98.0 3.9E-06 1.3E-10 90.1 6.5 40 20-59 3-42 (535)
118 1ojt_A Surface protein; redox- 98.0 1.5E-06 5.3E-11 92.1 3.2 43 21-63 5-47 (482)
119 2r0c_A REBC; flavin adenine di 98.0 3.1E-06 1.1E-10 91.3 5.5 43 21-63 25-67 (549)
120 1chu_A Protein (L-aspartate ox 98.0 2.6E-06 9E-11 91.7 4.8 41 20-61 6-46 (540)
121 2gmh_A Electron transfer flavo 98.0 2.7E-06 9.3E-11 92.5 5.0 40 22-61 35-80 (584)
122 3atr_A Conserved archaeal prot 98.0 1.7E-06 6E-11 90.9 3.3 51 280-332 101-156 (453)
123 2rgh_A Alpha-glycerophosphate 98.0 3.5E-06 1.2E-10 91.4 5.8 60 271-332 178-244 (571)
124 2bry_A NEDD9 interacting prote 98.0 3.8E-06 1.3E-10 89.5 6.0 41 20-60 90-130 (497)
125 2bs2_A Quinol-fumarate reducta 98.0 2.3E-06 7.9E-11 94.1 4.3 52 279-332 158-214 (660)
126 1vdc_A NTR, NADPH dependent th 98.0 2.1E-06 7.3E-11 85.9 3.7 44 20-63 6-53 (333)
127 2qa1_A PGAE, polyketide oxygen 98.0 4.1E-06 1.4E-10 89.4 6.0 40 20-59 9-48 (500)
128 3dgh_A TRXR-1, thioredoxin red 98.0 3.2E-06 1.1E-10 89.6 5.1 53 279-333 227-284 (483)
129 3fmw_A Oxygenase; mithramycin, 98.0 4.2E-06 1.4E-10 90.7 6.1 38 21-58 48-85 (570)
130 2a8x_A Dihydrolipoyl dehydroge 98.0 2.1E-06 7.2E-11 90.6 3.6 42 21-63 2-43 (464)
131 2q0l_A TRXR, thioredoxin reduc 98.0 4E-06 1.4E-10 83.0 5.4 40 23-63 2-42 (311)
132 3gyx_A Adenylylsulfate reducta 98.0 4.5E-06 1.5E-10 91.8 6.0 53 279-332 166-227 (662)
133 1zk7_A HGII, reductase, mercur 98.0 3.1E-06 1.1E-10 89.4 4.5 42 21-63 3-44 (467)
134 1trb_A Thioredoxin reductase; 98.0 2.7E-06 9.4E-11 84.5 3.6 42 20-62 3-44 (320)
135 2r9z_A Glutathione amide reduc 98.0 3E-06 1E-10 89.4 4.1 51 280-333 208-259 (463)
136 2hqm_A GR, grase, glutathione 98.0 2.8E-06 9.4E-11 90.1 3.7 54 279-333 226-280 (479)
137 3g3e_A D-amino-acid oxidase; F 98.0 2.7E-06 9.4E-11 86.0 3.5 37 23-59 1-43 (351)
138 1ges_A Glutathione reductase; 98.0 3.1E-06 1.1E-10 89.0 3.7 52 280-333 209-260 (450)
139 1k0i_A P-hydroxybenzoate hydro 98.0 3.9E-06 1.3E-10 86.2 4.4 35 22-56 2-36 (394)
140 2qa2_A CABE, polyketide oxygen 98.0 5.7E-06 1.9E-10 88.2 5.7 39 21-59 11-49 (499)
141 2h88_A Succinate dehydrogenase 98.0 3.9E-06 1.3E-10 91.7 4.4 52 279-332 155-211 (621)
142 1fec_A Trypanothione reductase 97.9 4.2E-06 1.4E-10 89.0 4.2 53 279-333 231-283 (490)
143 4hb9_A Similarities with proba 97.9 6.1E-06 2.1E-10 84.7 5.3 35 23-57 2-36 (412)
144 3fbs_A Oxidoreductase; structu 97.9 5.4E-06 1.9E-10 81.1 4.6 38 23-60 3-40 (297)
145 2eq6_A Pyruvate dehydrogenase 97.9 3.6E-06 1.2E-10 88.8 3.6 42 21-63 5-46 (464)
146 2xve_A Flavin-containing monoo 97.9 5.9E-06 2E-10 87.2 5.1 42 23-64 3-50 (464)
147 3cp8_A TRNA uridine 5-carboxym 97.9 6.1E-06 2.1E-10 89.7 5.0 42 18-59 17-59 (641)
148 1ebd_A E3BD, dihydrolipoamide 97.9 4.4E-06 1.5E-10 87.9 3.6 41 22-63 3-43 (455)
149 2wpf_A Trypanothione reductase 97.9 4E-06 1.4E-10 89.3 3.3 53 279-333 235-287 (495)
150 3c4a_A Probable tryptophan hyd 97.9 6.6E-06 2.3E-10 84.3 4.8 35 23-57 1-37 (381)
151 2dkh_A 3-hydroxybenzoate hydro 97.9 1.5E-05 5E-10 87.7 7.8 39 21-59 31-70 (639)
152 1ps9_A 2,4-dienoyl-COA reducta 97.9 1.1E-05 3.7E-10 89.3 6.6 42 21-62 372-413 (671)
153 1lvl_A Dihydrolipoamide dehydr 97.9 4.2E-06 1.4E-10 88.2 3.1 42 21-63 4-45 (458)
154 2aqj_A Tryptophan halogenase, 97.9 9.9E-06 3.4E-10 87.1 6.0 52 279-332 165-216 (538)
155 1fl2_A Alkyl hydroperoxide red 97.9 7.9E-06 2.7E-10 80.8 4.9 39 22-62 1-39 (310)
156 3ces_A MNMG, tRNA uridine 5-ca 97.9 7.8E-06 2.7E-10 88.9 5.1 50 280-332 125-175 (651)
157 4b1b_A TRXR, thioredoxin reduc 97.9 6E-06 2.1E-10 88.7 4.1 52 279-333 263-314 (542)
158 1xdi_A RV3303C-LPDA; reductase 97.9 4.4E-06 1.5E-10 89.0 2.9 51 280-333 224-274 (499)
159 3g5s_A Methylenetetrahydrofola 97.9 1.2E-05 4.2E-10 81.8 5.9 40 23-62 2-41 (443)
160 1o94_A Tmadh, trimethylamine d 97.9 1.2E-05 4.2E-10 89.6 6.4 44 20-63 387-430 (729)
161 1onf_A GR, grase, glutathione 97.9 6.7E-06 2.3E-10 87.7 4.1 54 279-334 217-271 (500)
162 2zxi_A TRNA uridine 5-carboxym 97.9 8.7E-06 3E-10 88.3 5.0 52 279-333 123-175 (637)
163 3ihm_A Styrene monooxygenase A 97.9 7.5E-06 2.6E-10 85.5 4.3 34 22-55 22-55 (430)
164 1kdg_A CDH, cellobiose dehydro 97.8 1E-05 3.5E-10 87.2 5.2 38 20-57 5-42 (546)
165 3t37_A Probable dehydrogenase; 97.8 8.7E-06 3E-10 87.1 4.6 35 22-56 17-52 (526)
166 2e5v_A L-aspartate oxidase; ar 97.8 1.1E-05 3.9E-10 85.2 5.4 51 279-332 119-170 (472)
167 1kf6_A Fumarate reductase flav 97.8 5.8E-06 2E-10 90.2 3.2 52 279-332 134-191 (602)
168 1y56_A Hypothetical protein PH 97.8 8.5E-06 2.9E-10 86.7 4.3 42 21-63 107-148 (493)
169 3q9t_A Choline dehydrogenase a 97.8 1.1E-05 3.9E-10 87.2 5.1 37 20-56 4-41 (577)
170 2ywl_A Thioredoxin reductase r 97.8 1.4E-05 4.8E-10 72.6 4.8 33 23-55 2-34 (180)
171 3s5w_A L-ornithine 5-monooxyge 97.8 1.1E-05 3.9E-10 84.7 4.4 41 21-61 29-74 (463)
172 2e4g_A Tryptophan halogenase; 97.7 2.2E-05 7.4E-10 84.7 5.7 52 279-332 194-246 (550)
173 1jnr_A Adenylylsulfate reducta 97.7 2.1E-05 7.1E-10 86.5 5.5 52 279-332 151-212 (643)
174 1ju2_A HydroxynitrIle lyase; f 97.7 1.3E-05 4.4E-10 86.2 3.7 38 21-59 25-62 (536)
175 2pyx_A Tryptophan halogenase; 97.7 1.7E-05 5.7E-10 85.1 4.4 52 279-332 175-227 (526)
176 1hyu_A AHPF, alkyl hydroperoxi 97.7 2.3E-05 7.8E-10 84.0 5.3 41 20-62 210-250 (521)
177 2gag_A Heterotetrameric sarcos 97.7 1.9E-05 6.6E-10 90.7 4.9 42 21-62 127-168 (965)
178 3ics_A Coenzyme A-disulfide re 97.7 2.1E-05 7.2E-10 85.5 4.9 50 279-333 228-277 (588)
179 1lqt_A FPRA; NADP+ derivative, 97.7 1.7E-05 5.8E-10 83.5 3.6 42 21-62 2-50 (456)
180 3cgb_A Pyridine nucleotide-dis 97.7 2.2E-05 7.5E-10 83.2 4.5 52 279-334 227-278 (480)
181 3qvp_A Glucose oxidase; oxidor 97.7 2.7E-05 9.1E-10 84.4 5.0 39 17-55 14-53 (583)
182 2weu_A Tryptophan 5-halogenase 97.7 1.7E-05 5.9E-10 84.5 3.4 52 279-332 173-224 (511)
183 1pn0_A Phenol 2-monooxygenase; 97.6 2.3E-05 8E-10 86.4 4.3 44 21-64 7-57 (665)
184 3kd9_A Coenzyme A disulfide re 97.6 3.1E-05 1E-09 81.2 4.8 41 21-61 2-44 (449)
185 1gte_A Dihydropyrimidine dehyd 97.6 3.3E-05 1.1E-09 89.3 5.2 41 21-61 186-227 (1025)
186 3iwa_A FAD-dependent pyridine 97.6 2.7E-05 9.2E-10 82.2 4.1 54 278-334 201-254 (472)
187 1cjc_A Protein (adrenodoxin re 97.6 2.9E-05 9.8E-10 81.9 4.2 42 21-62 5-48 (460)
188 2x8g_A Thioredoxin glutathione 97.6 2.9E-05 1E-09 84.5 4.4 35 20-54 105-139 (598)
189 1n4w_A CHOD, cholesterol oxida 97.6 4.1E-05 1.4E-09 81.6 5.1 39 20-58 3-41 (504)
190 3fim_B ARYL-alcohol oxidase; A 97.5 4.3E-05 1.5E-09 82.5 4.2 38 22-59 2-40 (566)
191 3oc4_A Oxidoreductase, pyridin 97.5 5E-05 1.7E-09 79.7 4.5 52 279-334 189-240 (452)
192 3h28_A Sulfide-quinone reducta 97.5 5.1E-05 1.8E-09 79.0 4.2 39 23-61 3-43 (430)
193 2cdu_A NADPH oxidase; flavoenz 97.5 6.1E-05 2.1E-09 79.0 4.6 53 279-334 191-243 (452)
194 1coy_A Cholesterol oxidase; ox 97.4 0.00011 3.6E-09 78.5 5.9 38 20-57 9-46 (507)
195 1gpe_A Protein (glucose oxidas 97.4 8.3E-05 2.8E-09 80.8 5.1 38 20-57 22-60 (587)
196 2jbv_A Choline oxidase; alcoho 97.4 9.7E-05 3.3E-09 79.5 5.5 39 21-59 12-51 (546)
197 1q1r_A Putidaredoxin reductase 97.4 0.00011 3.9E-09 76.5 5.8 57 279-335 191-247 (431)
198 3h8l_A NADH oxidase; membrane 97.4 5.8E-05 2E-09 78.0 3.1 51 279-336 218-268 (409)
199 1nhp_A NADH peroxidase; oxidor 97.4 9.1E-05 3.1E-09 77.6 4.5 52 279-334 191-242 (447)
200 1m6i_A Programmed cell death p 97.4 0.00011 3.6E-09 78.2 4.9 52 280-334 227-278 (493)
201 2bc0_A NADH oxidase; flavoprot 97.4 0.00014 4.8E-09 77.1 5.7 52 279-334 236-287 (490)
202 2v3a_A Rubredoxin reductase; a 97.3 0.00013 4.3E-09 74.8 4.9 53 279-334 187-239 (384)
203 2gqw_A Ferredoxin reductase; f 97.3 0.00013 4.4E-09 75.5 4.9 50 279-335 187-236 (408)
204 1xhc_A NADH oxidase /nitrite r 97.3 0.00016 5.6E-09 73.6 4.9 46 280-333 184-229 (367)
205 3sx6_A Sulfide-quinone reducta 97.2 0.00016 5.5E-09 75.5 4.2 36 22-57 4-42 (437)
206 3ef6_A Toluene 1,2-dioxygenase 97.2 0.00027 9.2E-09 73.1 5.1 53 279-334 185-237 (410)
207 3ntd_A FAD-dependent pyridine 97.2 0.00022 7.7E-09 76.8 4.6 36 23-58 2-39 (565)
208 4b63_A L-ornithine N5 monooxyg 97.2 0.00011 3.8E-09 78.2 2.1 44 20-63 37-80 (501)
209 4g6h_A Rotenone-insensitive NA 96.9 0.00049 1.7E-08 73.2 4.6 36 21-56 41-76 (502)
210 3vrd_B FCCB subunit, flavocyto 96.9 0.00054 1.8E-08 70.3 4.1 38 23-60 3-42 (401)
211 3klj_A NAD(FAD)-dependent dehy 96.8 0.00091 3.1E-08 68.6 5.2 39 21-59 8-46 (385)
212 4eqs_A Coenzyme A disulfide re 96.7 0.00097 3.3E-08 69.6 4.3 48 279-333 188-235 (437)
213 3hyw_A Sulfide-quinone reducta 96.6 0.0012 4.1E-08 68.6 4.0 34 24-57 4-39 (430)
214 1nhp_A NADH peroxidase; oxidor 95.4 0.015 5.2E-07 60.4 5.9 39 22-60 149-187 (447)
215 2g1u_A Hypothetical protein TM 95.4 0.015 5E-07 51.2 5.0 34 22-55 19-52 (155)
216 1lss_A TRK system potassium up 95.3 0.016 5.3E-07 49.4 4.8 33 23-55 5-37 (140)
217 3klj_A NAD(FAD)-dependent dehy 95.3 0.014 4.6E-07 59.7 4.9 38 23-60 147-184 (385)
218 4gcm_A TRXR, thioredoxin reduc 94.9 0.021 7.1E-07 56.0 4.9 37 23-59 146-182 (312)
219 1id1_A Putative potassium chan 94.9 0.028 9.7E-07 49.1 5.2 34 22-55 3-36 (153)
220 3k6j_A Protein F01G10.3, confi 94.8 0.028 9.6E-07 58.6 5.8 56 1-56 28-88 (460)
221 3fwz_A Inner membrane protein 94.7 0.04 1.4E-06 47.4 5.6 33 23-55 8-40 (140)
222 3llv_A Exopolyphosphatase-rela 94.7 0.03 1E-06 48.1 4.7 33 23-55 7-39 (141)
223 1lvl_A Dihydrolipoamide dehydr 94.6 0.024 8.4E-07 59.1 4.7 37 23-59 172-208 (458)
224 2v3a_A Rubredoxin reductase; a 94.6 0.032 1.1E-06 56.7 5.4 39 23-61 146-184 (384)
225 2eq6_A Pyruvate dehydrogenase 94.5 0.033 1.1E-06 58.3 5.3 37 23-59 170-206 (464)
226 1ebd_A E3BD, dihydrolipoamide 94.4 0.032 1.1E-06 58.1 5.2 37 23-59 171-207 (455)
227 1v59_A Dihydrolipoamide dehydr 94.4 0.037 1.3E-06 58.0 5.5 38 23-60 184-221 (478)
228 2yqu_A 2-oxoglutarate dehydrog 94.4 0.034 1.2E-06 57.9 5.1 37 23-59 168-204 (455)
229 1xhc_A NADH oxidase /nitrite r 94.3 0.032 1.1E-06 56.4 4.8 37 23-59 144-180 (367)
230 3c85_A Putative glutathione-re 94.3 0.038 1.3E-06 49.8 4.8 37 19-55 36-73 (183)
231 3ic5_A Putative saccharopine d 94.0 0.052 1.8E-06 44.5 4.7 33 23-55 6-39 (118)
232 2gqw_A Ferredoxin reductase; f 94.0 0.05 1.7E-06 55.8 5.4 38 23-60 146-183 (408)
233 4a5l_A Thioredoxin reductase; 93.9 0.045 1.5E-06 53.4 4.8 35 23-57 153-187 (314)
234 1ges_A Glutathione reductase; 93.9 0.048 1.6E-06 56.7 5.1 37 23-59 168-204 (450)
235 1yvv_A Amine oxidase, flavin-c 93.7 1.1 3.7E-05 43.8 14.5 92 273-377 104-197 (336)
236 3ado_A Lambda-crystallin; L-gu 93.6 0.055 1.9E-06 53.6 4.7 33 23-55 7-39 (319)
237 2r9z_A Glutathione amide reduc 93.5 0.062 2.1E-06 56.1 5.1 37 23-59 167-203 (463)
238 3cgb_A Pyridine nucleotide-dis 93.4 0.044 1.5E-06 57.6 3.9 38 22-59 186-223 (480)
239 4e12_A Diketoreductase; oxidor 93.3 0.08 2.7E-06 51.4 5.3 33 23-55 5-37 (283)
240 1zmd_A Dihydrolipoyl dehydroge 93.2 0.078 2.7E-06 55.5 5.4 37 23-59 179-215 (474)
241 2hmt_A YUAA protein; RCK, KTN, 93.2 0.068 2.3E-06 45.5 4.1 33 23-55 7-39 (144)
242 1q1r_A Putidaredoxin reductase 93.2 0.082 2.8E-06 54.7 5.4 38 23-60 150-187 (431)
243 2bc0_A NADH oxidase; flavoprot 93.1 0.074 2.5E-06 56.0 5.0 37 23-59 195-231 (490)
244 1ryi_A Glycine oxidase; flavop 93.1 0.14 4.6E-06 51.5 6.8 48 12-59 7-54 (382)
245 2a8x_A Dihydrolipoyl dehydroge 93.0 0.08 2.7E-06 55.2 5.1 37 23-59 172-208 (464)
246 3ic9_A Dihydrolipoamide dehydr 93.0 0.091 3.1E-06 55.3 5.5 39 22-60 174-212 (492)
247 1f0y_A HCDH, L-3-hydroxyacyl-C 93.0 0.097 3.3E-06 51.3 5.4 33 23-55 16-48 (302)
248 1ojt_A Surface protein; redox- 93.0 0.068 2.3E-06 56.1 4.5 37 23-59 186-222 (482)
249 3d1c_A Flavin-containing putat 92.9 0.077 2.6E-06 53.0 4.6 36 23-58 167-202 (369)
250 3l4b_C TRKA K+ channel protien 92.9 0.072 2.5E-06 49.4 4.1 32 24-55 2-33 (218)
251 3ef6_A Toluene 1,2-dioxygenase 92.9 0.089 3.1E-06 53.9 5.1 37 23-59 144-180 (410)
252 3doj_A AT3G25530, dehydrogenas 92.8 0.097 3.3E-06 51.6 5.1 37 20-56 19-55 (310)
253 3gwf_A Cyclohexanone monooxyge 92.8 0.1 3.5E-06 55.7 5.7 35 22-56 178-212 (540)
254 3kd9_A Coenzyme A disulfide re 92.8 0.097 3.3E-06 54.3 5.4 37 24-60 150-186 (449)
255 2q0l_A TRXR, thioredoxin reduc 92.8 0.093 3.2E-06 51.1 4.9 36 23-58 144-179 (311)
256 1dxl_A Dihydrolipoamide dehydr 92.7 0.074 2.5E-06 55.5 4.3 37 23-59 178-214 (470)
257 4e21_A 6-phosphogluconate dehy 92.6 0.099 3.4E-06 52.8 4.9 39 17-55 17-55 (358)
258 2raf_A Putative dinucleotide-b 92.5 0.12 4.2E-06 47.7 5.1 35 22-56 19-53 (209)
259 3uox_A Otemo; baeyer-villiger 92.5 0.11 3.7E-06 55.6 5.2 36 21-56 184-219 (545)
260 2hqm_A GR, grase, glutathione 92.4 0.1 3.6E-06 54.6 5.1 37 23-59 186-222 (479)
261 1fl2_A Alkyl hydroperoxide red 92.4 0.11 3.7E-06 50.6 4.7 35 23-57 145-179 (310)
262 1onf_A GR, grase, glutathione 92.3 0.11 3.7E-06 54.8 5.0 37 23-59 177-213 (500)
263 2y0c_A BCEC, UDP-glucose dehyd 92.3 0.11 3.7E-06 54.6 4.9 34 22-55 8-41 (478)
264 3fg2_P Putative rubredoxin red 92.3 0.13 4.5E-06 52.5 5.4 39 23-61 143-181 (404)
265 3g0o_A 3-hydroxyisobutyrate de 92.3 0.12 4.1E-06 50.7 4.9 35 21-55 6-40 (303)
266 1pzg_A LDH, lactate dehydrogen 92.2 0.13 4.5E-06 51.2 5.2 34 22-55 9-43 (331)
267 3qsg_A NAD-binding phosphogluc 92.2 0.098 3.3E-06 51.7 4.2 47 8-54 8-57 (312)
268 3i83_A 2-dehydropantoate 2-red 92.1 0.13 4.3E-06 51.0 4.9 33 23-55 3-35 (320)
269 1ks9_A KPA reductase;, 2-dehyd 92.1 0.13 4.4E-06 49.6 4.9 33 24-56 2-34 (291)
270 1zk7_A HGII, reductase, mercur 92.1 0.13 4.3E-06 53.7 5.1 37 23-59 177-213 (467)
271 1vdc_A NTR, NADPH dependent th 92.1 0.12 4.2E-06 50.7 4.8 36 23-58 160-195 (333)
272 4ap3_A Steroid monooxygenase; 92.1 0.12 4E-06 55.3 5.0 36 21-56 190-225 (549)
273 1bg6_A N-(1-D-carboxylethyl)-L 92.0 0.13 4.4E-06 51.4 4.9 34 22-55 4-37 (359)
274 2xve_A Flavin-containing monoo 92.0 0.11 3.9E-06 54.2 4.7 36 23-58 198-233 (464)
275 2qae_A Lipoamide, dihydrolipoy 92.0 0.13 4.4E-06 53.7 5.1 37 23-59 175-211 (468)
276 3axb_A Putative oxidoreductase 92.0 0.23 7.9E-06 51.2 7.0 41 20-60 21-62 (448)
277 1trb_A Thioredoxin reductase; 92.0 0.13 4.3E-06 50.2 4.8 36 23-58 146-181 (320)
278 3lxd_A FAD-dependent pyridine 92.0 0.14 5E-06 52.3 5.4 38 23-60 153-190 (415)
279 2q7v_A Thioredoxin reductase; 92.0 0.14 4.7E-06 50.3 5.0 36 23-58 153-188 (325)
280 3k96_A Glycerol-3-phosphate de 92.0 0.14 4.7E-06 51.6 5.1 36 20-55 27-62 (356)
281 3da1_A Glycerol-3-phosphate de 92.0 0.18 6E-06 54.1 6.2 44 19-62 15-58 (561)
282 2cdu_A NADPH oxidase; flavoenz 92.0 0.13 4.4E-06 53.4 5.0 37 23-59 150-186 (452)
283 4eqs_A Coenzyme A disulfide re 91.9 0.12 4.3E-06 53.4 4.8 38 23-60 148-185 (437)
284 2a87_A TRXR, TR, thioredoxin r 91.9 0.13 4.5E-06 50.7 4.8 36 23-58 156-191 (335)
285 2gv8_A Monooxygenase; FMO, FAD 91.9 0.12 4.2E-06 53.4 4.8 35 23-57 213-248 (447)
286 2dpo_A L-gulonate 3-dehydrogen 91.9 0.13 4.6E-06 50.9 4.7 33 23-55 7-39 (319)
287 2zbw_A Thioredoxin reductase; 91.9 0.14 4.6E-06 50.5 4.8 37 23-59 153-189 (335)
288 2uzz_A N-methyl-L-tryptophan o 91.8 0.29 9.9E-06 48.8 7.3 42 22-63 2-43 (372)
289 3hn2_A 2-dehydropantoate 2-red 91.8 0.13 4.5E-06 50.6 4.6 33 23-55 3-35 (312)
290 3ghy_A Ketopantoate reductase 91.8 0.14 4.8E-06 51.0 4.9 34 22-55 3-36 (335)
291 3lk7_A UDP-N-acetylmuramoylala 91.7 0.16 5.5E-06 52.8 5.4 35 22-56 9-43 (451)
292 2izz_A Pyrroline-5-carboxylate 91.6 0.14 4.9E-06 50.7 4.6 41 15-55 15-59 (322)
293 2ew2_A 2-dehydropantoate 2-red 91.5 0.16 5.5E-06 49.6 4.8 33 23-55 4-36 (316)
294 3l8k_A Dihydrolipoyl dehydroge 91.5 0.24 8.3E-06 51.5 6.5 40 22-61 172-211 (466)
295 3ntd_A FAD-dependent pyridine 91.4 0.16 5.4E-06 54.3 5.1 36 24-59 153-188 (565)
296 1zcj_A Peroxisomal bifunctiona 91.3 0.22 7.4E-06 52.1 5.9 33 23-55 38-70 (463)
297 3cty_A Thioredoxin reductase; 91.3 0.16 5.5E-06 49.6 4.6 36 23-58 156-191 (319)
298 3gg2_A Sugar dehydrogenase, UD 91.3 0.16 5.6E-06 52.8 4.8 33 23-55 3-35 (450)
299 2oln_A NIKD protein; flavoprot 91.2 0.41 1.4E-05 48.3 7.8 38 21-58 3-40 (397)
300 3vtf_A UDP-glucose 6-dehydroge 91.2 0.18 6.1E-06 52.2 5.0 35 21-55 20-54 (444)
301 3dtt_A NADP oxidoreductase; st 91.2 0.19 6.5E-06 47.6 4.9 37 19-55 16-52 (245)
302 3urh_A Dihydrolipoyl dehydroge 91.0 0.21 7.3E-06 52.3 5.6 38 23-60 199-236 (491)
303 3oc4_A Oxidoreductase, pyridin 91.0 0.21 7.1E-06 51.8 5.4 38 23-60 148-185 (452)
304 3qha_A Putative oxidoreductase 91.0 0.18 6.2E-06 49.3 4.6 35 22-56 15-49 (296)
305 3s5w_A L-ornithine 5-monooxyge 91.0 0.14 4.7E-06 53.2 4.0 36 22-57 227-264 (463)
306 3g79_A NDP-N-acetyl-D-galactos 90.9 0.21 7.1E-06 52.4 5.2 34 23-56 19-54 (478)
307 3dk9_A Grase, GR, glutathione 90.9 0.2 6.7E-06 52.4 5.1 37 23-59 188-224 (478)
308 3itj_A Thioredoxin reductase 1 90.9 0.19 6.7E-06 49.1 4.8 37 23-59 174-210 (338)
309 2rgh_A Alpha-glycerophosphate 90.8 0.44 1.5E-05 51.1 7.8 39 21-59 31-69 (571)
310 1mv8_A GMD, GDP-mannose 6-dehy 90.8 0.18 6.2E-06 52.2 4.7 32 24-55 2-33 (436)
311 4a7p_A UDP-glucose dehydrogena 90.8 0.21 7.1E-06 51.9 5.0 35 22-56 8-42 (446)
312 3ab1_A Ferredoxin--NADP reduct 90.8 0.2 6.7E-06 50.0 4.8 37 23-59 164-200 (360)
313 1zej_A HBD-9, 3-hydroxyacyl-CO 90.7 0.21 7.3E-06 48.8 4.8 33 22-55 12-44 (293)
314 3dfz_A SIRC, precorrin-2 dehyd 90.7 0.23 7.8E-06 46.5 4.8 36 19-54 28-63 (223)
315 3dfu_A Uncharacterized protein 90.7 0.12 4E-06 48.8 2.7 34 21-54 5-38 (232)
316 3e8x_A Putative NAD-dependent 90.6 0.21 7.3E-06 46.5 4.6 36 20-55 19-55 (236)
317 1mo9_A ORF3; nucleotide bindin 90.4 0.23 7.8E-06 52.7 5.1 38 23-60 215-252 (523)
318 2cul_A Glucose-inhibited divis 90.4 0.6 2.1E-05 43.5 7.6 52 279-333 68-120 (232)
319 4g65_A TRK system potassium up 90.3 0.16 5.5E-06 53.0 3.8 34 22-55 3-36 (461)
320 2pv7_A T-protein [includes: ch 90.3 0.33 1.1E-05 47.4 5.8 34 23-56 22-56 (298)
321 1kyq_A Met8P, siroheme biosynt 90.2 0.15 5E-06 49.4 3.1 38 19-56 10-47 (274)
322 2uyy_A N-PAC protein; long-cha 90.2 0.3 1E-05 48.0 5.4 35 22-56 30-64 (316)
323 3cgv_A Geranylgeranyl reductas 90.1 0.41 1.4E-05 48.0 6.6 52 279-332 102-156 (397)
324 3g17_A Similar to 2-dehydropan 90.1 0.17 5.9E-06 49.3 3.5 33 23-55 3-35 (294)
325 1z82_A Glycerol-3-phosphate de 90.1 0.26 8.8E-06 49.0 4.9 32 23-54 15-46 (335)
326 3ics_A Coenzyme A-disulfide re 90.1 0.28 9.5E-06 52.7 5.5 38 23-60 188-225 (588)
327 2x5o_A UDP-N-acetylmuramoylala 90.1 0.17 5.7E-06 52.5 3.6 35 23-57 6-40 (439)
328 2gf3_A MSOX, monomeric sarcosi 90.0 0.48 1.7E-05 47.4 7.0 37 22-58 3-39 (389)
329 4dll_A 2-hydroxy-3-oxopropiona 90.0 0.28 9.5E-06 48.5 5.1 34 22-55 31-64 (320)
330 3hwr_A 2-dehydropantoate 2-red 90.0 0.25 8.7E-06 48.7 4.7 34 21-55 18-51 (318)
331 3pef_A 6-phosphogluconate dehy 90.0 0.26 8.8E-06 47.8 4.7 33 24-56 3-35 (287)
332 3lad_A Dihydrolipoamide dehydr 90.0 0.31 1.1E-05 50.8 5.7 37 23-59 181-217 (476)
333 1xdi_A RV3303C-LPDA; reductase 90.0 0.26 8.7E-06 51.9 5.0 38 23-60 183-220 (499)
334 3gpi_A NAD-dependent epimerase 90.0 0.29 9.9E-06 47.0 5.1 34 23-56 4-37 (286)
335 3mog_A Probable 3-hydroxybutyr 89.9 0.26 9E-06 51.7 5.0 33 23-55 6-38 (483)
336 2x8g_A Thioredoxin glutathione 89.9 0.23 7.8E-06 53.6 4.6 32 23-54 287-318 (598)
337 4dio_A NAD(P) transhydrogenase 89.8 0.27 9.3E-06 50.2 4.9 34 23-56 191-224 (405)
338 1lld_A L-lactate dehydrogenase 89.8 0.27 9.3E-06 48.3 4.8 33 23-55 8-42 (319)
339 3ggo_A Prephenate dehydrogenas 89.8 0.34 1.2E-05 47.8 5.5 33 23-55 34-68 (314)
340 3f8d_A Thioredoxin reductase ( 89.7 0.27 9.3E-06 47.6 4.7 37 23-59 155-191 (323)
341 1hyu_A AHPF, alkyl hydroperoxi 89.7 0.22 7.5E-06 52.8 4.2 36 23-58 356-391 (521)
342 3pid_A UDP-glucose 6-dehydroge 89.7 0.28 9.5E-06 50.7 4.8 33 22-55 36-68 (432)
343 3ktd_A Prephenate dehydrogenas 89.6 0.33 1.1E-05 48.6 5.2 33 23-55 9-41 (341)
344 1jay_A Coenzyme F420H2:NADP+ o 89.6 0.3 1E-05 44.7 4.6 32 24-55 2-34 (212)
345 2weu_A Tryptophan 5-halogenase 89.5 0.72 2.5E-05 48.4 8.1 34 23-56 3-39 (511)
346 2vns_A Metalloreductase steap3 89.5 0.32 1.1E-05 45.1 4.7 33 23-55 29-61 (215)
347 2ewd_A Lactate dehydrogenase,; 89.5 0.3 1E-05 48.1 4.8 33 23-55 5-38 (317)
348 2e4g_A Tryptophan halogenase; 89.4 0.74 2.5E-05 49.0 8.2 37 20-56 23-62 (550)
349 3oj0_A Glutr, glutamyl-tRNA re 89.4 0.18 6.2E-06 43.4 2.7 33 23-55 22-54 (144)
350 3l6d_A Putative oxidoreductase 89.3 0.37 1.3E-05 47.3 5.3 34 22-55 9-42 (306)
351 3ojo_A CAP5O; rossmann fold, c 89.1 0.3 1E-05 50.4 4.6 33 24-56 13-45 (431)
352 2zyd_A 6-phosphogluconate dehy 89.1 0.31 1.1E-05 51.1 4.8 36 20-55 13-48 (480)
353 4huj_A Uncharacterized protein 89.0 0.2 6.9E-06 46.6 3.0 34 22-55 23-57 (220)
354 3tl2_A Malate dehydrogenase; c 89.0 0.39 1.3E-05 47.5 5.2 36 19-54 5-41 (315)
355 3l9w_A Glutathione-regulated p 89.0 0.34 1.1E-05 49.8 4.8 33 23-55 5-37 (413)
356 3r9u_A Thioredoxin reductase; 88.9 0.34 1.2E-05 46.8 4.7 35 23-57 148-182 (315)
357 3atr_A Conserved archaeal prot 88.9 0.8 2.7E-05 47.3 7.8 37 21-57 5-41 (453)
358 3lzw_A Ferredoxin--NADP reduct 88.9 0.36 1.2E-05 47.0 4.9 37 23-59 155-191 (332)
359 3pdu_A 3-hydroxyisobutyrate de 88.8 0.26 9E-06 47.7 3.7 33 24-56 3-35 (287)
360 1dlj_A UDP-glucose dehydrogena 88.8 0.31 1.1E-05 49.8 4.5 31 24-55 2-32 (402)
361 1txg_A Glycerol-3-phosphate de 88.7 0.28 9.4E-06 48.5 3.9 30 24-53 2-31 (335)
362 2qyt_A 2-dehydropantoate 2-red 88.7 0.26 9E-06 48.1 3.7 32 23-54 9-46 (317)
363 3p2y_A Alanine dehydrogenase/p 88.7 0.28 9.6E-06 49.7 3.9 33 23-55 185-217 (381)
364 2hjr_A Malate dehydrogenase; m 88.7 0.41 1.4E-05 47.5 5.1 33 23-55 15-48 (328)
365 4gwg_A 6-phosphogluconate dehy 88.6 0.39 1.3E-05 50.3 5.1 35 21-55 3-37 (484)
366 2v6b_A L-LDH, L-lactate dehydr 88.6 0.38 1.3E-05 47.2 4.8 32 24-55 2-35 (304)
367 3ego_A Probable 2-dehydropanto 88.5 0.39 1.3E-05 47.2 4.8 32 23-55 3-34 (307)
368 3nix_A Flavoprotein/dehydrogen 88.5 0.78 2.7E-05 46.5 7.3 37 21-57 4-40 (421)
369 1evy_A Glycerol-3-phosphate de 88.5 0.26 8.9E-06 49.5 3.6 32 24-55 17-48 (366)
370 2vdc_G Glutamate synthase [NAD 88.4 0.51 1.7E-05 49.1 5.9 36 22-57 264-300 (456)
371 2h78_A Hibadh, 3-hydroxyisobut 88.4 0.39 1.3E-05 46.8 4.7 33 23-55 4-36 (302)
372 1t2d_A LDH-P, L-lactate dehydr 88.3 0.47 1.6E-05 47.0 5.2 33 23-55 5-38 (322)
373 3dgz_A Thioredoxin reductase 2 88.3 0.44 1.5E-05 49.9 5.3 34 23-56 186-219 (488)
374 2gmh_A Electron transfer flavo 88.0 1.1 3.8E-05 48.1 8.3 53 279-332 144-211 (584)
375 3eag_A UDP-N-acetylmuramate:L- 87.9 0.45 1.5E-05 47.1 4.8 34 23-56 5-39 (326)
376 2x3n_A Probable FAD-dependent 87.8 0.76 2.6E-05 46.4 6.6 37 21-57 5-41 (399)
377 2rcy_A Pyrroline carboxylate r 87.8 0.41 1.4E-05 45.4 4.3 35 22-56 4-42 (262)
378 1guz_A Malate dehydrogenase; o 87.6 0.48 1.7E-05 46.6 4.9 32 24-55 2-35 (310)
379 2o3j_A UDP-glucose 6-dehydroge 87.6 0.46 1.6E-05 49.9 4.9 33 23-55 10-44 (481)
380 3qfa_A Thioredoxin reductase 1 87.6 0.63 2.2E-05 49.2 6.1 32 23-54 211-242 (519)
381 2q3e_A UDP-glucose 6-dehydroge 87.6 0.42 1.4E-05 50.0 4.6 33 23-55 6-40 (467)
382 1nyt_A Shikimate 5-dehydrogena 87.5 0.62 2.1E-05 44.8 5.4 33 22-54 119-151 (271)
383 2f1k_A Prephenate dehydrogenas 87.5 0.5 1.7E-05 45.3 4.8 32 24-55 2-33 (279)
384 3fbs_A Oxidoreductase; structu 87.5 0.47 1.6E-05 45.3 4.6 33 23-56 142-174 (297)
385 4ffl_A PYLC; amino acid, biosy 87.4 0.49 1.7E-05 47.4 4.9 33 24-56 3-35 (363)
386 1x0v_A GPD-C, GPDH-C, glycerol 87.4 0.31 1.1E-05 48.6 3.3 35 22-56 8-49 (354)
387 3cky_A 2-hydroxymethyl glutara 87.4 0.5 1.7E-05 45.8 4.8 33 23-55 5-37 (301)
388 3iwa_A FAD-dependent pyridine 87.3 1.2 4.1E-05 46.2 7.9 37 22-58 3-41 (472)
389 4ezb_A Uncharacterized conserv 87.3 0.44 1.5E-05 47.0 4.3 33 23-55 25-58 (317)
390 4b1b_A TRXR, thioredoxin reduc 87.1 0.59 2E-05 49.8 5.5 36 23-58 224-259 (542)
391 1yqg_A Pyrroline-5-carboxylate 87.1 0.46 1.6E-05 45.1 4.2 32 24-55 2-34 (263)
392 2gf2_A Hibadh, 3-hydroxyisobut 87.0 0.53 1.8E-05 45.6 4.7 32 24-55 2-33 (296)
393 2iz1_A 6-phosphogluconate dehy 86.8 0.58 2E-05 49.0 5.2 34 22-55 5-38 (474)
394 1x13_A NAD(P) transhydrogenase 86.8 0.51 1.7E-05 48.3 4.6 33 23-55 173-205 (401)
395 2aef_A Calcium-gated potassium 86.8 0.29 9.9E-06 45.8 2.6 32 23-55 10-41 (234)
396 1fec_A Trypanothione reductase 86.8 1.3 4.4E-05 46.4 7.8 43 21-63 2-53 (490)
397 3ew7_A LMO0794 protein; Q8Y8U8 86.7 0.63 2.1E-05 42.4 4.8 32 24-55 2-34 (221)
398 3o0h_A Glutathione reductase; 86.7 1.4 4.8E-05 45.9 8.0 49 14-63 18-66 (484)
399 2aqj_A Tryptophan halogenase, 86.6 1.4 4.6E-05 46.7 8.0 38 20-57 3-43 (538)
400 2wpf_A Trypanothione reductase 86.6 1.4 4.7E-05 46.2 8.0 43 21-63 6-57 (495)
401 3ius_A Uncharacterized conserv 86.6 0.56 1.9E-05 44.8 4.6 33 23-55 6-38 (286)
402 2pzm_A Putative nucleotide sug 86.5 0.76 2.6E-05 45.1 5.6 42 14-55 12-54 (330)
403 1cjc_A Protein (adrenodoxin re 86.4 0.54 1.9E-05 48.9 4.7 36 22-57 145-201 (460)
404 1vpd_A Tartronate semialdehyde 86.3 0.6 2.1E-05 45.2 4.7 33 23-55 6-38 (299)
405 2wtb_A MFP2, fatty acid multif 86.3 0.51 1.7E-05 52.1 4.6 33 23-55 313-345 (725)
406 1jw9_B Molybdopterin biosynthe 86.2 0.54 1.9E-05 44.6 4.2 33 22-54 31-64 (249)
407 3gvi_A Malate dehydrogenase; N 86.2 0.7 2.4E-05 45.8 5.1 35 21-55 6-41 (324)
408 3c24_A Putative oxidoreductase 86.2 0.61 2.1E-05 45.0 4.6 33 23-55 12-45 (286)
409 2qcu_A Aerobic glycerol-3-phos 86.2 1.4 4.8E-05 46.2 7.8 39 21-59 2-40 (501)
410 1m6i_A Programmed cell death p 86.1 1.7 5.8E-05 45.5 8.3 39 20-58 9-49 (493)
411 2pgd_A 6-phosphogluconate dehy 86.1 0.64 2.2E-05 48.7 5.0 33 23-55 3-35 (482)
412 3dgh_A TRXR-1, thioredoxin red 86.0 0.85 2.9E-05 47.6 6.0 33 23-55 188-220 (483)
413 1l7d_A Nicotinamide nucleotide 86.0 0.65 2.2E-05 47.1 4.9 34 22-55 172-205 (384)
414 2g5c_A Prephenate dehydrogenas 86.0 0.66 2.3E-05 44.5 4.7 32 24-55 3-36 (281)
415 1a5z_A L-lactate dehydrogenase 85.9 0.55 1.9E-05 46.3 4.2 32 24-55 2-35 (319)
416 3tri_A Pyrroline-5-carboxylate 85.9 0.72 2.5E-05 44.5 5.0 34 22-55 3-39 (280)
417 4id9_A Short-chain dehydrogena 85.8 0.65 2.2E-05 45.8 4.7 39 19-57 16-55 (347)
418 1hdo_A Biliverdin IX beta redu 85.8 0.79 2.7E-05 41.1 4.9 33 23-55 4-37 (206)
419 3h2s_A Putative NADH-flavin re 85.7 0.73 2.5E-05 42.1 4.7 32 24-55 2-34 (224)
420 2ywl_A Thioredoxin reductase r 85.7 1.7 5.9E-05 38.2 7.1 50 279-333 56-105 (180)
421 2gqf_A Hypothetical protein HI 85.6 1.7 5.7E-05 44.3 7.8 43 20-62 2-44 (401)
422 3p7m_A Malate dehydrogenase; p 85.6 0.82 2.8E-05 45.2 5.2 35 21-55 4-39 (321)
423 2p4q_A 6-phosphogluconate dehy 85.6 0.69 2.4E-05 48.7 4.9 33 23-55 11-43 (497)
424 3c4n_A Uncharacterized protein 85.6 0.38 1.3E-05 49.0 2.9 59 271-333 161-231 (405)
425 2eez_A Alanine dehydrogenase; 85.6 0.68 2.3E-05 46.7 4.7 33 23-55 167-199 (369)
426 1pgj_A 6PGDH, 6-PGDH, 6-phosph 85.5 0.66 2.3E-05 48.6 4.8 32 24-55 3-34 (478)
427 1pjc_A Protein (L-alanine dehy 85.5 0.69 2.3E-05 46.5 4.7 33 23-55 168-200 (361)
428 1np3_A Ketol-acid reductoisome 85.5 0.71 2.4E-05 46.0 4.8 33 23-55 17-49 (338)
429 3e1t_A Halogenase; flavoprotei 85.5 1.5 5.2E-05 46.1 7.6 38 20-57 5-42 (512)
430 4b4o_A Epimerase family protei 85.5 0.83 2.8E-05 44.0 5.2 34 24-57 2-36 (298)
431 3phh_A Shikimate dehydrogenase 85.3 0.81 2.8E-05 44.0 4.9 34 22-55 118-151 (269)
432 2pyx_A Tryptophan halogenase; 85.1 1.8 6.3E-05 45.6 8.1 36 21-56 6-53 (526)
433 1p77_A Shikimate 5-dehydrogena 85.1 0.69 2.3E-05 44.5 4.4 34 22-55 119-152 (272)
434 1yj8_A Glycerol-3-phosphate de 85.1 0.5 1.7E-05 47.7 3.5 34 23-56 22-62 (375)
435 2bs2_A Quinol-fumarate reducta 85.1 1.8 6.2E-05 47.2 8.2 42 20-61 3-44 (660)
436 3c7a_A Octopine dehydrogenase; 85.1 0.47 1.6E-05 48.3 3.3 30 23-52 3-33 (404)
437 1ur5_A Malate dehydrogenase; o 85.0 0.8 2.8E-05 45.0 4.9 33 23-55 3-36 (309)
438 4dna_A Probable glutathione re 85.0 1.5 5E-05 45.4 7.2 42 21-63 4-45 (463)
439 1o94_A Tmadh, trimethylamine d 84.8 0.64 2.2E-05 51.4 4.5 36 23-59 529-566 (729)
440 2wdq_A Succinate dehydrogenase 84.8 1.7 5.9E-05 46.7 7.8 42 20-61 5-46 (588)
441 3pqe_A L-LDH, L-lactate dehydr 84.7 0.83 2.8E-05 45.3 4.8 34 22-55 5-40 (326)
442 2cvz_A Dehydrogenase, 3-hydrox 84.7 0.73 2.5E-05 44.3 4.3 31 24-55 3-33 (289)
443 2gag_A Heterotetrameric sarcos 84.7 0.47 1.6E-05 54.3 3.4 37 23-59 285-321 (965)
444 1hyh_A L-hicdh, L-2-hydroxyiso 84.6 0.68 2.3E-05 45.4 4.1 32 24-55 3-36 (309)
445 1y6j_A L-lactate dehydrogenase 84.6 0.89 3E-05 44.9 5.0 34 22-55 7-42 (318)
446 1wdk_A Fatty oxidation complex 84.6 0.58 2E-05 51.6 4.0 33 23-55 315-347 (715)
447 2ahr_A Putative pyrroline carb 84.6 0.85 2.9E-05 43.2 4.7 33 23-55 4-36 (259)
448 3orf_A Dihydropteridine reduct 84.6 0.92 3.2E-05 42.7 4.9 33 24-56 24-57 (251)
449 2egg_A AROE, shikimate 5-dehyd 84.5 1 3.5E-05 43.9 5.4 34 22-55 141-175 (297)
450 1pjq_A CYSG, siroheme synthase 84.2 0.77 2.6E-05 47.8 4.5 36 19-54 9-44 (457)
451 3d1l_A Putative NADP oxidoredu 84.2 0.74 2.5E-05 43.8 4.1 33 23-55 11-44 (266)
452 3i3l_A Alkylhalidase CMLS; fla 84.1 1.3 4.6E-05 47.6 6.5 42 18-59 19-60 (591)
453 2vhw_A Alanine dehydrogenase; 84.1 0.86 3E-05 46.1 4.7 33 23-55 169-201 (377)
454 1w4x_A Phenylacetone monooxyge 84.1 0.87 3E-05 48.4 5.0 35 22-56 186-220 (542)
455 1edz_A 5,10-methylenetetrahydr 84.0 1.1 3.7E-05 44.2 5.2 34 21-54 176-210 (320)
456 1w6u_A 2,4-dienoyl-COA reducta 83.9 1.7 5.9E-05 41.8 6.7 43 13-55 17-60 (302)
457 3ek2_A Enoyl-(acyl-carrier-pro 83.8 0.98 3.3E-05 42.8 4.8 42 14-55 6-50 (271)
458 2a9f_A Putative malic enzyme ( 83.7 0.93 3.2E-05 45.9 4.7 35 21-55 187-222 (398)
459 3f9i_A 3-oxoacyl-[acyl-carrier 83.7 1 3.5E-05 42.2 4.8 43 13-55 5-48 (249)
460 3dhn_A NAD-dependent epimerase 83.7 0.83 2.8E-05 41.9 4.1 33 23-55 5-38 (227)
461 2zxi_A TRNA uridine 5-carboxym 83.7 1.9 6.5E-05 46.6 7.4 38 21-58 26-64 (637)
462 2h88_A Succinate dehydrogenase 83.6 1.7 6E-05 46.9 7.2 42 20-61 16-57 (621)
463 3gt0_A Pyrroline-5-carboxylate 83.6 1 3.5E-05 42.4 4.8 33 23-55 3-39 (247)
464 3dqp_A Oxidoreductase YLBE; al 83.3 0.92 3.1E-05 41.5 4.2 32 24-55 2-34 (219)
465 2hk9_A Shikimate dehydrogenase 83.3 0.86 2.9E-05 43.9 4.1 34 22-55 129-162 (275)
466 1vl6_A Malate oxidoreductase; 83.3 0.98 3.4E-05 45.6 4.6 34 21-54 191-225 (388)
467 4gbj_A 6-phosphogluconate dehy 83.2 0.83 2.8E-05 44.6 4.1 33 24-56 7-39 (297)
468 2d5c_A AROE, shikimate 5-dehyd 83.2 1.3 4.4E-05 42.2 5.4 32 24-55 118-149 (263)
469 3o38_A Short chain dehydrogena 83.1 1.7 5.9E-05 41.1 6.2 35 21-55 21-57 (266)
470 2qrj_A Saccharopine dehydrogen 83.1 1 3.5E-05 45.7 4.7 39 22-60 214-257 (394)
471 1i36_A Conserved hypothetical 83.1 0.96 3.3E-05 42.9 4.4 30 24-53 2-31 (264)
472 1nvt_A Shikimate 5'-dehydrogen 82.9 1.2 4.1E-05 43.1 5.0 32 23-55 129-160 (287)
473 1gte_A Dihydropyrimidine dehyd 82.8 0.92 3.1E-05 52.2 4.8 33 24-56 334-367 (1025)
474 3k30_A Histamine dehydrogenase 82.8 0.85 2.9E-05 50.0 4.4 39 23-61 524-564 (690)
475 1yb4_A Tartronic semialdehyde 82.7 0.87 3E-05 43.9 3.9 32 23-55 4-35 (295)
476 2rir_A Dipicolinate synthase, 82.7 1.1 3.7E-05 43.7 4.7 35 21-55 156-190 (300)
477 3b1f_A Putative prephenate deh 82.5 0.96 3.3E-05 43.6 4.2 33 23-55 7-41 (290)
478 3zwc_A Peroxisomal bifunctiona 82.0 1.6 5.4E-05 48.2 6.1 34 22-55 316-349 (742)
479 1ff9_A Saccharopine reductase; 82.0 1.1 3.9E-05 46.4 4.7 33 23-55 4-36 (450)
480 1rp0_A ARA6, thiazole biosynth 81.7 2.5 8.7E-05 40.5 6.9 53 279-333 119-186 (284)
481 1oju_A MDH, malate dehydrogena 81.7 1.1 3.7E-05 43.7 4.2 32 24-55 2-35 (294)
482 1k0i_A P-hydroxybenzoate hydro 81.6 1.5 5.1E-05 44.0 5.4 53 278-332 102-157 (394)
483 3d4o_A Dipicolinate synthase s 81.6 1.3 4.3E-05 43.1 4.7 34 22-55 155-188 (293)
484 3ond_A Adenosylhomocysteinase; 81.6 1.2 4.2E-05 46.4 4.8 34 22-55 265-298 (488)
485 4gx0_A TRKA domain protein; me 81.5 1.2 4E-05 47.6 4.8 34 23-56 349-382 (565)
486 3abi_A Putative uncharacterize 81.4 1.2 4.1E-05 44.7 4.5 37 17-54 11-47 (365)
487 2bgk_A Rhizome secoisolaricire 81.4 1.7 5.8E-05 41.2 5.5 43 13-55 7-50 (278)
488 3qvo_A NMRA family protein; st 81.2 1.1 3.8E-05 41.6 4.0 34 22-55 23-58 (236)
489 2z1m_A GDP-D-mannose dehydrata 81.2 1.5 5E-05 42.9 5.0 34 23-56 4-38 (345)
490 1n7h_A GDP-D-mannose-4,6-dehyd 81.0 1.4 4.7E-05 44.1 4.8 34 23-56 29-63 (381)
491 3ces_A MNMG, tRNA uridine 5-ca 81.0 2.3 7.8E-05 46.1 6.8 35 21-55 27-61 (651)
492 2dkn_A 3-alpha-hydroxysteroid 80.9 1.5 5E-05 40.9 4.7 33 24-56 3-36 (255)
493 3vps_A TUNA, NAD-dependent epi 80.8 1.5 5E-05 42.4 4.9 34 23-56 8-42 (321)
494 3nep_X Malate dehydrogenase; h 80.7 1.3 4.4E-05 43.7 4.3 32 24-55 2-35 (314)
495 3ldh_A Lactate dehydrogenase; 80.6 1.4 4.8E-05 43.6 4.6 34 22-55 21-56 (330)
496 1ldn_A L-lactate dehydrogenase 80.5 1.4 4.9E-05 43.3 4.7 33 23-55 7-41 (316)
497 2i6t_A Ubiquitin-conjugating e 80.5 1.3 4.3E-05 43.5 4.2 33 23-55 15-49 (303)
498 2q1w_A Putative nucleotide sug 80.5 1.5 5.3E-05 42.9 4.9 33 23-55 22-55 (333)
499 3fi9_A Malate dehydrogenase; s 80.5 1.6 5.5E-05 43.5 5.0 34 22-55 8-44 (343)
500 2c5a_A GDP-mannose-3', 5'-epim 80.5 2.3 7.9E-05 42.5 6.3 35 21-55 28-63 (379)
No 1
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=100.00 E-value=6.3e-60 Score=512.65 Aligned_cols=440 Identities=30% Similarity=0.499 Sum_probs=342.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCC-------CC---------
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSS-------VC--------- 83 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~-------~~--------- 83 (523)
+.+|||+|||||+.|++.|++|++.|++|+|+|+|++|||.+.++++.++.+|+...+.... +.
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l~~l~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEEA 85 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHHTC----------CGGGGCCTTEEE
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccHHHHHHHHHHhhccccccccccchhhhhhcchhh
Confidence 34799999999999999999999999999999999999999999999999999886653100 00
Q ss_pred -----CCCccccceecccc-------------------------------------------------------------
Q 009881 84 -----PDPLYSDVEISNYA------------------------------------------------------------- 97 (523)
Q Consensus 84 -----~~~~~~~~~~~~~~------------------------------------------------------------- 97 (523)
.....++.++.++.
T Consensus 86 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (650)
T 1vg0_A 86 IPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCPG 165 (650)
T ss_dssp EEBCSSCCCEEEEEEEECSCC-----------------------------------------------------------
T ss_pred ccccccccccccceeEeecccccccchhhccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00000011000000
Q ss_pred --------------------------------------------cc----ccccCCCceEEecCCCeEEecChHHHHHHh
Q 009881 98 --------------------------------------------SR----LLSQHPRNFNLDVSGPRVLFCADHAVDLML 129 (523)
Q Consensus 98 --------------------------------------------~~----~~~~~~r~f~ldl~GP~ll~~~~~lv~lL~ 129 (523)
.. .+.+..|+|+||+ ||+++++++.++++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~R~f~~DL-~PklL~~~g~lv~LL~ 244 (650)
T 1vg0_A 166 PESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDL-VSKLLYSRGLLIDLLI 244 (650)
T ss_dssp ---------------------------------------------CCCHHHHHHTGGGCCEES-SCCCEESSSHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhhcccCCCeEEee-CCeeeeCCcHHHHHHH
Confidence 00 0112569999999 5999999999999999
Q ss_pred cCCcccccccccccceeeeccCCceeecCCCHHHHHhcccCChHhHHHHHHHHHHHHhhcccCccccccccccccccCCc
Q 009881 130 KSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSP 209 (523)
Q Consensus 130 ~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s~~~if~~~~ls~~~k~~L~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s 209 (523)
++|+.+|++|+.++..|++. +|+++++|+++.++|+++.+++.+||.||+|++++.++... + ..+..+...|
T Consensus 245 ~sgV~~yLEFk~v~~~y~~~-~G~~~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~~-p------~~~~~~d~~S 316 (650)
T 1vg0_A 245 KSNVSRYAEFKNITRILAFR-EGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEH-P------DEYRAYEGTT 316 (650)
T ss_dssp HHTGGGGCCEEECCEEEEES-SSSEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGGC-H------HHHHTTTTSB
T ss_pred HcCCcceeeEEEccceEEec-CCCEeECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhccC-h------HHHhhhccCC
Confidence 99999999999999988874 88999999999999999999999999999999998876421 1 1123456799
Q ss_pred HHHHHHhcCCChhHHHHHHHHHhccCCCcchhhhhcchHHHHHHHHHHHHhhhcccCCCccEEeecCCcChHHHHHHHHH
Q 009881 210 FAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRA 289 (523)
Q Consensus 210 ~~efl~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~~l~~~~~~l~s~g~~g~~~~~~~~p~gG~~eL~qal~r~~ 289 (523)
+.+||+++++++.++.++.+++++..... .++..++.++.+|+.++++||.+ +++||+||+++|+|+|||++
T Consensus 317 ~~d~L~~~~ls~~L~~~L~~~lal~~~~~------~pa~~~l~~i~~~l~sl~~yg~s--g~~yp~GG~g~L~qaL~r~~ 388 (650)
T 1vg0_A 317 FSEYLKTQKLTPNLQYFVLHSIAMTSETT------SCTVDGLKATKKFLQCLGRYGNT--PFLFPLYGQGELPQCFCRMC 388 (650)
T ss_dssp HHHHHTTSSSCHHHHHHHHHHTTC--CCS------CBHHHHHHHHHHHHHHTTSSSSS--SEEEETTCTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHhccCCCC------CchhHHHHHHHHHHHHHHhhccC--ceEEeCCchhHHHHHHHHHH
Confidence 99999999999999999888776653221 24667777889999999999863 48999999999999999999
Q ss_pred HHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEE
Q 009881 290 AVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGI 369 (523)
Q Consensus 290 a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i 369 (523)
+++||+|+||++|++|.+++++|++++|++.+|++++||+||++|.++ +.... .+...++++|++
T Consensus 389 ~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~l-p~~~~--------------~~~~~~~v~R~i 453 (650)
T 1vg0_A 389 AVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYL-SENTC--------------SRVQYRQISRAV 453 (650)
T ss_dssp HHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGB-CTTTT--------------TTCCCEEEEEEE
T ss_pred HHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhc-CHhHh--------------ccccccceEEEE
Confidence 999999999999999999732288999998889999999999988765 32110 111246799999
Q ss_pred EEecCCCCCCC---CceEEEcCCCCCCCCCCceEEEEEeCCCCCcCCCCcEEEEEEEeeccccchHHHHHHHHHHHHhhh
Q 009881 370 CITRSSLKPDL---SNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGMFVLYFSALCDEVNQGKKLLHAALSALQKLL 446 (523)
Q Consensus 370 ~i~~~~l~~~~---~~~~~~~p~~~~~~~~~~~v~v~~~s~~~~~cP~G~~vi~~st~~~~~~~~~~~l~~~~~~l~~~~ 446 (523)
+|+++|+.+.. ...++++|+.+ + ..++||++++|++++.||+|++|+|++|.. ..+++++|++++++|+...
T Consensus 454 ~i~~~pi~~~~~~~~~~~iiiP~~~-g--~~~~V~i~~~Ss~~~~cP~G~~Vv~lst~~--~~~~~~eLe~~l~~L~~~~ 528 (650)
T 1vg0_A 454 LITDGSVLRTDADQQVSILTVPAEE-P--GSFAVRVIELCSSTMTCMKGTYLVHLTCMS--SKTAREDLERVVQKLFTPY 528 (650)
T ss_dssp EEESSCSSCCSCCCCCEEEEECCSS-T--TSCCEEEEEECGGGTSSCTTCEEEEEEEEC--SSCHHHHHHHHHHHHCBSC
T ss_pred EEecCCCCCcCCCcceEEEEccCcc-C--CCCCEEEEEeCCCCCCCCCCCEEEEEEeec--CCCHHHHHHHHHHHHhccc
Confidence 99999987542 34688888765 2 367899999999999999999999999873 3488999999999998532
Q ss_pred hcCCCCCCCCccccccccCCcceEEEEEEEeecccccc-cccccCChhhhcccceEeeeccCcee
Q 009881 447 VTGTAGNSSTAQSEDMEEAKPTLLWSALYIQDLSLVCF-ASVFSLPKVLFHSFKMYLYCGRALDF 510 (523)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (523)
. +++.++.+..+|+|||++||+|.+..+.. .....+|.++ |+|++|..+.
T Consensus 529 -~-------~~~~~~~~~~~~~vLws~~~~~~~~~~~~~~~~~~~~~ni------~~~~~~d~~~ 579 (650)
T 1vg0_A 529 -T-------EIEAENEQVEKPRLLWALYFNMRDSSDISRDCYNDLPSNV------YVCSGPDSGL 579 (650)
T ss_dssp -S-------CCC-------CCBEEEEEEEEEEECTTCCGGGSSSCCTTE------EEECCCCSSS
T ss_pred -c-------ccccccccccCCceEEEEEEEeecccccccccccCCCCCE------EEeCCCCCcc
Confidence 1 11222335678999999999998765322 3456789999 9999998775
No 2
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.5e-55 Score=466.16 Aligned_cols=378 Identities=24% Similarity=0.422 Sum_probs=309.3
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceeccccc
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (523)
++.+|||||||||++|+++|+.|+++|++|+|+|+++++||++++++..++..|+..+... .
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~--------~---------- 78 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENI--------P---------- 78 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCC--------C----------
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCc--------c----------
Confidence 3467999999999999999999999999999999999999999999987766666532210 0
Q ss_pred cccccCCCceEEecCCCeEEecChHHHHHHhcCCcccccccccccceeeec--------cCCceeecCCCHHHHHhcccC
Q 009881 99 RLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLD--------ADAKLCSVPDSRAAIFKDKSL 170 (523)
Q Consensus 99 ~~~~~~~r~f~ldl~GP~ll~~~~~lv~lL~~~~~~~ylef~~~~~~~~~~--------~dg~~~~vP~s~~~if~~~~l 170 (523)
..+ ...|+|++|+. |+++++.+.++++|.++++.+|++|+.++..|++. ++|+++++|+++.++|+++.+
T Consensus 79 ~~~-g~~R~y~iDL~-P~~l~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lL 156 (475)
T 3p1w_A 79 SKY-GENRHWNVDLI-PKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLL 156 (475)
T ss_dssp GGG-CCGGGCCEESS-CCBEETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTS
T ss_pred ccc-ccccceEEeec-CeEeecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCC
Confidence 112 24689999995 99999999999999999999999999999998764 257899999999999999999
Q ss_pred ChHhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhccCCCcchhhhhcchHHH
Q 009881 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDG 250 (523)
Q Consensus 171 s~~~k~~L~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~~ 250 (523)
++.+|+++|+|+..+.++.+..+.. .+ ..+..+.|+.+|++++++++.+++++.+++++.... +. ...++.++
T Consensus 157 s~~eK~~l~kFL~~l~~~~~~~~~~---~~-~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~-~~--~~~~a~~~ 229 (475)
T 3p1w_A 157 SLMEKNRCKNFYQYVSEWDANKRNT---WD-NLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLND-DY--LKQPAYLT 229 (475)
T ss_dssp CHHHHHHHHHHHHHHHHCCTTCGGG---ST-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSS-GG--GGSBHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhhccchh---hh-cccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCC-Cc--ccCCHHHH
Confidence 9999999999999988764321110 00 012346899999999999999999988887765321 11 22478889
Q ss_pred HHHHHHHHHhhhcccCCCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEE
Q 009881 251 INRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKL 330 (523)
Q Consensus 251 l~~~~~~l~s~g~~g~~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~V 330 (523)
+.+++.|+.|+++||.+ +++||+||+++|+|+|+|.+++.||+|+++++|++|..++ +|++++|++.+|++++||+|
T Consensus 230 l~ri~~y~~Sl~~yg~s--~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~-~g~v~gV~~~~G~~i~Ad~V 306 (475)
T 3p1w_A 230 LERIKLYMQSISAFGKS--PFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDD-DNKVCGIKSSDGEIAYCDKV 306 (475)
T ss_dssp HHHHHHHHHHHHHHSSC--SEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECT-TSCEEEEEETTSCEEEEEEE
T ss_pred HHHHHHHHHHHhhcCCC--ceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEec-CCeEEEEEECCCcEEECCEE
Confidence 99999999999999854 4899999999999999999999999999999999999842 78889999999999999999
Q ss_pred EECCCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCC--CCceEEEcCCCCCCCCCCceEEEEEeCCC
Q 009881 331 VLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD--LSNFLVIFPPRSLFPEQVTSIRVLQLGGN 408 (523)
Q Consensus 331 I~~p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~--~~~~~~~~p~~~~~~~~~~~v~v~~~s~~ 408 (523)
|+++++.. .+ +.. ....++++|+|+|+++|+... .+.++++||+.+++ ..++||++++|++
T Consensus 307 I~a~~~~~-~~--p~~------------~~~~~~v~R~i~I~~~pi~~~~~~~~~~i~~P~~~~~--~~~~iy~~~~s~~ 369 (475)
T 3p1w_A 307 ICDPSYVM-HL--KNK------------IKKIGQVIRCICILSNPIPETNQTNSCQIIIPQNQLN--RKSDIYINLVSFQ 369 (475)
T ss_dssp EECGGGCT-TS--TTS------------EEEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGGT--SSSCEEEEEEEGG
T ss_pred EECCCccc-cC--ccc------------ccccceEEEEEEEEeccCcccCCCceEEEEeCCcccC--CCCCEEEEEECCC
Confidence 99887651 11 100 012468999999999999763 35678899987764 3578999999999
Q ss_pred CCcCCCCcEEEEEEEeeccccchHHHHHHHHHHHHh
Q 009881 409 LAVCPLGMFVLYFSALCDEVNQGKKLLHAALSALQK 444 (523)
Q Consensus 409 ~~~cP~G~~vi~~st~~~~~~~~~~~l~~~~~~l~~ 444 (523)
+++||+|+||+|+||.+++ .+++++|++++++|..
T Consensus 370 ~~~cp~G~~i~~~st~~e~-~~~~~~l~~~l~~l~~ 404 (475)
T 3p1w_A 370 HGVTLKGKYIAIVSATVET-NNPIKEIEKPLELLGT 404 (475)
T ss_dssp GTSSCTTCEEEEEEEECCS-SCHHHHTHHHHHTTCS
T ss_pred cCcCCCCcEEEEEEeecCC-CCHHHHHHHHHHHhcc
Confidence 9999999999999998764 5899999999999983
No 3
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=100.00 E-value=8e-41 Score=355.36 Aligned_cols=376 Identities=24% Similarity=0.478 Sum_probs=282.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceecccccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (523)
+.++||||||||++||+||++|+++|++|+|||+|+++||++++++.++...|++.... ...+ ...
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~----------~~~~----~~~ 74 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPI----------SKEE----RES 74 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCC----------CHHH----HHH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCc----------cccC----cch
Confidence 35699999999999999999999999999999999999999999987763222221100 0000 000
Q ss_pred ccccCCCceEEecCCCeEEecChHHHHHHhcCCcccccccccccceeeeccCCceeecCCCHHHHHhcccCChHhHHHHH
Q 009881 100 LLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (523)
Q Consensus 100 ~~~~~~r~f~ldl~GP~ll~~~~~lv~lL~~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s~~~if~~~~ls~~~k~~L~ 179 (523)
.+ ...+.|.+++. |+++++++.+.++|.+.|+.+|++|+.++..|++. +|+.+++|.++.+.+.+..++..+|+.++
T Consensus 75 ~~-~~g~~~~~~l~-P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~l~~~~~~~~~~ 151 (453)
T 2bcg_G 75 KF-GKDRDWNVDLI-PKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFK-QGKIYKVPANEIEAISSPLMGIFEKRRMK 151 (453)
T ss_dssp HH-CCGGGCCEESS-CCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEE-TTEEEECCSSHHHHHHCTTSCHHHHHHHH
T ss_pred hc-ccccceeeccc-cceeecCcHHHHHHHhcCCccceEEEEccceeEEe-CCeEEECCCChHHHHhhhccchhhHHHHH
Confidence 01 12356889994 99999999999999999999999999998878764 89999999997788888888888999999
Q ss_pred HHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhccCCCcchhhhhcchHHHHHHHHHHHH
Q 009881 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNS 259 (523)
Q Consensus 180 ~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~~l~~~~~~l~ 259 (523)
+|++.+.++....+.. ... .+....|+.+|++++++++.+++++.+.+.+...+ +. ...++..++.++..|+.
T Consensus 152 ~~~~~~~~~~~~~p~~---~~~-~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~-~~--~~~p~~~~~~~~~~~~~ 224 (453)
T 2bcg_G 152 KFLEWISSYKEDDLST---HQG-LDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTND-DY--LQQPARPSFERILLYCQ 224 (453)
T ss_dssp HHHHHHHHCBTTBGGG---STT-CCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSS-GG--GGSBHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCchh---hhc-cccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCc-cc--cCCchHHHHHHHHHHHH
Confidence 9999887654321110 000 12457899999999999999999887765543211 00 00145566667788888
Q ss_pred hhhcccCCCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCCCCC
Q 009881 260 SIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVP 339 (523)
Q Consensus 260 s~g~~g~~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p~~~~~ 339 (523)
++++++. +++.||+||+++|+++|++.+++.||+|+++++|++|..+++++++++|++ +|++++||+||+++.....
T Consensus 225 s~~~~~~--~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 225 SVARYGK--SPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHSS--CSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHhhcC--CceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 8888764 347799999999999999999999999999999999987521467778886 6889999999986433211
Q ss_pred CCCcccchhhhhhhhhcccCCCcc-eEEEEEEEecCCCCC--CCCceEEEcCCCCCCCCCCceEEEEEeCCCCCcCCCCc
Q 009881 340 GSLASSHQQLQESFQAFSLSDNKG-KVARGICITRSSLKP--DLSNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGM 416 (523)
Q Consensus 340 ~l~~~~~~~l~~~~~~l~~~~~~~-~v~r~i~i~~~~l~~--~~~~~~~~~p~~~~~~~~~~~v~v~~~s~~~~~cP~G~ 416 (523)
. +. ... ...++++++++++.. ...+..+++|....+ .++.+|+.+.+..++.||+|+
T Consensus 302 ~---------------l~---~~~~~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~--~~~~~~v~~~s~~d~~aP~G~ 361 (453)
T 2bcg_G 302 K---------------CK---STGQRVIRAICILNHPVPNTSNADSLQIIIPQSQLG--RKSDIYVAIVSDAHNVCSKGH 361 (453)
T ss_dssp G---------------EE---EEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGTT--CSSCEEEEEEEGGGTSSCTTC
T ss_pred h---------------hc---ccCCcceeEEEEEccccCCCCCCccEEEEeCccccC--CCCCEEEEEeCCCCCCCCCCc
Confidence 1 10 123 578889999998863 223556778865544 257899999998778999999
Q ss_pred EEEEEEEeeccccchHHHHHHHHHHHH
Q 009881 417 FVLYFSALCDEVNQGKKLLHAALSALQ 443 (523)
Q Consensus 417 ~vi~~st~~~~~~~~~~~l~~~~~~l~ 443 (523)
+++|+++++++ .++++.|+++++.|.
T Consensus 362 ~~~~v~~~~~~-~~~~~~l~~~~~~l~ 387 (453)
T 2bcg_G 362 YLAIISTIIET-DKPHIELEPAFKLLG 387 (453)
T ss_dssp EEEEEEEECCS-SCHHHHTHHHHGGGC
T ss_pred EEEEEEEecCC-CCHHHHHHHHHHHhh
Confidence 99999998775 467888998888865
No 4
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=100.00 E-value=3.4e-39 Score=340.90 Aligned_cols=370 Identities=27% Similarity=0.506 Sum_probs=280.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccc-ccchhhhhccCCCCCCCCCCCccccceeccccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (523)
+.++||||||+|++||++|++|+++|++|+|+|+++++||+++|++ +....++.+.... .+..
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~--------~~~~-------- 67 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEG--------PPET-------- 67 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTC--------CCGG--------
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCC--------ChhH--------
Confidence 3569999999999999999999999999999999999999999998 4321111110000 0000
Q ss_pred cccccCCCceEEecCCCeEEecChHHHHHHhcCCcccccccccccceeeeccCCceeecCCCHHHHHhcccCChHhHHHH
Q 009881 99 RLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (523)
Q Consensus 99 ~~~~~~~r~f~ldl~GP~ll~~~~~lv~lL~~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s~~~if~~~~ls~~~k~~L 178 (523)
+ ...+.|.+|+ ||++++..+.+.++|.+.|+.+|++|..++..|++. +|+.+.+|.++.+.+.+...+..+|+.+
T Consensus 68 --~-~~g~~~~~d~-gP~~l~~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~l~~~~~~~~~ 142 (433)
T 1d5t_A 68 --M-GRGRDWNVDL-IPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYK-GGKIYKVPSTETEALASNLMGMFEKRRF 142 (433)
T ss_dssp --G-CCGGGCCEES-SCCBEETTSHHHHHHHHHTGGGGCCEEECCEEEEEE-TTEEEECCCSHHHHHHCSSSCHHHHHHH
T ss_pred --h-cccCceEEcc-CcceeeccchHHHHHHHcCCccceEEEEeCceEEee-CCEEEECCCCHHHHhhCcccChhhHHHH
Confidence 1 1236789999 599999999999999999999999999988877764 8899999999777888888888899999
Q ss_pred HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhccCCCcchhhhhcchHHHHHHHHHHH
Q 009881 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (523)
Q Consensus 179 ~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~~l~~~~~~l 258 (523)
++|++.+.++....+.. .+ ..++.+.|+.+|+++++.++.+++++.+.+++... .++ ...++..++.++..|+
T Consensus 143 ~~~~~~~~~~~~~~p~~---~~-~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~-~~~--~~~p~~~~~~~~~~~~ 215 (433)
T 1d5t_A 143 RKFLVFVANFDENDPKT---FE-GVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRT-DDY--LDQPCLETINRIKLYS 215 (433)
T ss_dssp HHHHHHHHHCCTTCGGG---GT-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSS-SGG--GGSBSHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccCchh---cc-ccccccCCHHHHHHHcCCCHHHHHHHHHHHHhccC-CCc--cCCCHHHHHHHHHHHH
Confidence 99999887753221110 01 11345789999999999999999988765444221 111 1235666777788888
Q ss_pred HhhhcccCCCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCCCC
Q 009881 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTV 338 (523)
Q Consensus 259 ~s~g~~g~~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p~~~~ 338 (523)
.+++++|. ++++||+||+++|+++|++.+++.|++|+++++|++|..+ ++++++|+ .+|++++||+||++....
T Consensus 216 ~s~~~~g~--~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~--~~~v~~v~-~~g~~~~ad~VV~a~~~~- 289 (433)
T 1d5t_A 216 ESLARYGK--SPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK-SEGEVARCKQLICDPSYV- 289 (433)
T ss_dssp HSCCSSSC--CSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEE--TTEEEEEE-ETTEEEECSEEEECGGGC-
T ss_pred HHHHhcCC--CcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEe--CCEEEEEE-ECCeEEECCEEEECCCCC-
Confidence 88777774 3478999999999999999999999999999999999887 67777787 588999999999864332
Q ss_pred CCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCC--CCceEEEcCCCCCCCCCCceEEEEEeCCCCCcCCCCc
Q 009881 339 PGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD--LSNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGM 416 (523)
Q Consensus 339 ~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~--~~~~~~~~p~~~~~~~~~~~v~v~~~s~~~~~cP~G~ 416 (523)
+.. +.. ..+..++++++++++... +.+..+.+|...++ ..+.+|+.+.+.+++.||+|+
T Consensus 290 ~~~--------------~~~---~~~~~~~~~il~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~v~~~s~d~~~aP~G~ 350 (433)
T 1d5t_A 290 PDR--------------VRK---AGQVIRIICILSHPIKNTNDANSCQIIIPQNQVN--RKSDIYVCMISYAHNVAAQGK 350 (433)
T ss_dssp GGG--------------EEE---EEEEEEEEEEESSCCTTSTTCSSEEEEECGGGTT--CSSCEEEEEEEGGGTSSCTTC
T ss_pred ccc--------------ccc---cCcceeEEEEEcCcccccCCCceEEEEeCccccC--CCCCEEEEEECCCCcccCCCC
Confidence 111 000 124667888889887532 24567778765544 357899999997778999999
Q ss_pred EEEEEEEeeccccchHHHHHHHHHHHH
Q 009881 417 FVLYFSALCDEVNQGKKLLHAALSALQ 443 (523)
Q Consensus 417 ~vi~~st~~~~~~~~~~~l~~~~~~l~ 443 (523)
+++++++++++. ++++.|++++++|.
T Consensus 351 ~~~~~~~~~p~~-~~~~~l~~~~~~l~ 376 (433)
T 1d5t_A 351 YIAIASTTVETT-DPEKEVEPALGLLE 376 (433)
T ss_dssp EEEEEEEECCSS-CHHHHTHHHHTTTC
T ss_pred EEEEEEEecCCC-CHHHHHHHHHHHhh
Confidence 999999988764 67788998888865
No 5
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.97 E-value=8.1e-30 Score=273.55 Aligned_cols=343 Identities=14% Similarity=0.119 Sum_probs=205.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceeccccccccc
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (523)
.+|||||||++||+||++|+++|++|+|||+++++||+++|++.+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~----------------------------------- 46 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQ----------------------------------- 46 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEET-----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeC-----------------------------------
Confidence 579999999999999999999999999999999999999997643
Q ss_pred cCCCceEEecCCCeEEecChHHHHHHhcCC--ccccccccccccee-eeccCCceeecCCCHHHHHhc-ccCChHhHHHH
Q 009881 103 QHPRNFNLDVSGPRVLFCADHAVDLMLKSG--ASHYLEFKSIDATF-MLDADAKLCSVPDSRAAIFKD-KSLGLMEKNQL 178 (523)
Q Consensus 103 ~~~r~f~ldl~GP~ll~~~~~lv~lL~~~~--~~~ylef~~~~~~~-~~~~dg~~~~vP~s~~~if~~-~~ls~~~k~~L 178 (523)
+|.+|. ||+++...+.+.+++...+ +.+++++...+..+ +...+|+...++.+....... ..+++.+...+
T Consensus 47 ----G~~~D~-G~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~ 121 (501)
T 4dgk_A 47 ----GFTFDA-GPTVITDPSAIEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGY 121 (501)
T ss_dssp ----TEEEEC-SCCCBSCTHHHHHHHHTTTCCGGGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHH
T ss_pred ----CEEEec-CceeecCchhHHHHHHHhcchhhhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchh
Confidence 466777 5888766666666666554 56788888887766 334578888888876544321 23456777788
Q ss_pred HHHHHHHHhhcccCcc---cc---ccc---cccccc----cCCcHHHHHHhcCCChhHHHHHHH-HHhccCCCcchhhhh
Q 009881 179 MRFFKLVQGHLSLDES---EE---NNV---RISEED----LDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYV 244 (523)
Q Consensus 179 ~~fl~~~~~~~~~~~~---~~---~~~---~~~~~~----~~~s~~efl~~~~l~~~l~~~l~~-~i~l~~~~~~~~~~~ 244 (523)
.+|++.+......... .. ... ...... ...++.++++++..++.++.++.+ ++........
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~~----- 196 (501)
T 4dgk_A 122 RQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPFA----- 196 (501)
T ss_dssp HHHHHHHHHHTSSSCC--CCCCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC-------
T ss_pred hhHHHHHHHhhhhhhhhccccccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcch-----
Confidence 8888776554321100 00 000 000000 114677888888888888887643 3222111111
Q ss_pred cchHHHHHHHHHHHHhhhcccCCCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcE
Q 009881 245 LKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD 324 (523)
Q Consensus 245 ~s~~~~l~~~~~~l~s~g~~g~~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~ 324 (523)
.+... .+..++. ...| .+||+||+++|+++|++.++..||+|++|++|++|.++ ++++++|++++|++
T Consensus 197 ~~~~~---~~~~~~~--~~~G-----~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~--~~~~~gV~~~~g~~ 264 (501)
T 4dgk_A 197 TSSIY---TLIHALE--REWG-----VWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETT--GNKIEAVHLEDGRR 264 (501)
T ss_dssp CCCTH---HHHHHHH--SCCC-----EEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCE
T ss_pred hhhhh---hhhhhhh--ccCC-----eEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEee--CCeEEEEEecCCcE
Confidence 12211 1222211 1222 57999999999999999999999999999999999998 88999999999999
Q ss_pred EEcCEEEEC--CCCCCCCCCcccchhhhhh-hhhcccCCCcceEEEEEEEecCCCCCCCCceEEEcCCC-----------
Q 009881 325 ILSHKLVLD--PSFTVPGSLASSHQQLQES-FQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPR----------- 390 (523)
Q Consensus 325 i~A~~VI~~--p~~~~~~l~~~~~~~l~~~-~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~p~~----------- 390 (523)
+.||.||++ |..++..|+ +.. +.+.. .+.+.............+.++.+......+.++.-+..
T Consensus 265 ~~ad~VV~~a~~~~~~~~Ll-~~~-~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~ 342 (501)
T 4dgk_A 265 FLTQAVASNADVVHTYRDLL-SQH-PAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHD 342 (501)
T ss_dssp EECSCEEECCC-----------------------------CCEEEEEEEEESSCCTTSCSEEEEEECC------------
T ss_pred EEcCEEEECCCHHHHHHHhc-ccc-ccchhhhhhhhccccCCceeEEEecccCCccccccceeccccchhhhcccccccc
Confidence 999999964 444444442 211 11111 11121111112233333335665543332222221211
Q ss_pred CCCCCCCceEEEEEeCCC-CCcCCCCcEEEEEEEeec
Q 009881 391 SLFPEQVTSIRVLQLGGN-LAVCPLGMFVLYFSALCD 426 (523)
Q Consensus 391 ~~~~~~~~~v~v~~~s~~-~~~cP~G~~vi~~st~~~ 426 (523)
.++ ..+.+|+...+.. ...+|+|+.++++.+.++
T Consensus 343 ~~~--~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p 377 (501)
T 4dgk_A 343 GLA--EDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVP 377 (501)
T ss_dssp -CC--CEEEEEEECGGGTCGGGSSTTCEEEEEEEEEC
T ss_pred ccc--cCCceecccCCCCCCCcCCCCCceEEEEEecC
Confidence 111 2456788777654 488999999999888764
No 6
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.91 E-value=6.4e-23 Score=215.12 Aligned_cols=332 Identities=13% Similarity=0.122 Sum_probs=195.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceeccccccccc
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (523)
+||||||||++||+||+.|+++|++|+||||++++||+++++..+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~----------------------------------- 45 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYK----------------------------------- 45 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEET-----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccC-----------------------------------
Confidence 489999999999999999999999999999999999999997643
Q ss_pred cCCCceEEecCCCeEEec---ChHHHHHHhcCCcccccccccccceeeeccCCceeecCCCHHHHHhcccCChHhHHHHH
Q 009881 103 QHPRNFNLDVSGPRVLFC---ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (523)
Q Consensus 103 ~~~r~f~ldl~GP~ll~~---~~~lv~lL~~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s~~~if~~~~ls~~~k~~L~ 179 (523)
+|.+|. ||+.+.. ...+.+++.+.+.. .++...+....+..+|+...+|... ..+++.++..+.
T Consensus 46 ----g~~~d~-G~~~~~~~~~~~~~~~l~~~lg~~--~~~~~~~~~~~~~~~g~~~~~~~~~------~~l~~~~~~~~~ 112 (421)
T 3nrn_A 46 ----GFQLST-GALHMIPHGEDGPLAHLLRILGAK--VEIVNSNPKGKILWEGKIFHYRESW------KFLSVKEKAKAL 112 (421)
T ss_dssp ----TEEEES-SSCSEETTTTSSHHHHHHHHHTCC--CCEEECSSSCEEEETTEEEEGGGGG------GGCC--------
T ss_pred ----CEEEec-CCeEEEccCCChHHHHHHHHhCCc--ceEEECCCCeEEEECCEEEEcCCch------hhCCHhHHHHHH
Confidence 345565 4654432 23566777776663 3333333332222377777776532 235566666666
Q ss_pred HHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCC-ChhHHHHHHH-HHhccCCCcchhhhhcchHHHHHHHHHH
Q 009881 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKL-PHKIKSIVLY-AIAMADYDQEVSEYVLKTRDGINRLALY 257 (523)
Q Consensus 180 ~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l-~~~l~~~l~~-~i~l~~~~~~~~~~~~s~~~~l~~~~~~ 257 (523)
+++...... . .+..+.++.+|++++++ ++.++.++.. ...... .++ ..+++...+..+..+
T Consensus 113 ~~~~~~~~~--~-----------~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~ 175 (421)
T 3nrn_A 113 KLLAEIRMN--K-----------LPKEEIPADEWIKEKIGENEFLLSVLESFAGWADS--VSL--SDLTALELAKEIRAA 175 (421)
T ss_dssp CCHHHHHTT--C-----------CCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHS--SCG--GGSBHHHHHHHHHHH
T ss_pred HHHHHHHhc--c-----------CCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcC--CCc--ccCCHHHHHHHHHHH
Confidence 555433321 0 01234789999998744 4445554321 111111 111 235555555544433
Q ss_pred HHhhhcccCCCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC-CCC
Q 009881 258 NSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSF 336 (523)
Q Consensus 258 l~s~g~~g~~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~-p~~ 336 (523)
. .++ + +.+|++|+++|+++|.+.++..|++|+++++|++|..+ ++++ | +++|++++||+||++ +.+
T Consensus 176 ~----~~~---g-~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~v--V-~~~g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 176 L----RWG---G-PGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIE--EKKV--Y-TRDNEEYSFDVAISNVGVR 242 (421)
T ss_dssp H----HHC---S-CEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETT--TTEE--E-ETTCCEEECSEEEECSCHH
T ss_pred h----hcC---C-cceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEE--CCEE--E-EeCCcEEEeCEEEECCCHH
Confidence 2 122 1 46999999999999999999999999999999999865 5554 6 478899999999974 322
Q ss_pred CCCCCCcccchhhhhhh-hhcccCCCcceEEEEEEEecCCCCCCCCceEEEcCCCCCCCCCCceEEEEEeCC-CCCcCCC
Q 009881 337 TVPGSLASSHQQLQESF-QAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLGG-NLAVCPL 414 (523)
Q Consensus 337 ~~~~l~~~~~~~l~~~~-~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~p~~~~~~~~~~~v~v~~~s~-~~~~cP~ 414 (523)
...+++ + .+.++..+ +.+.+. .+.......+.++++.. ....++ +++.. . .-.+...+. +...+|+
T Consensus 243 ~~~~ll-~-~~~~~~~~~~~~~~~-~~~~~~~v~l~~~~~~~--~~~~~~-~~~~~-----~-~~~i~~~s~~~p~~ap~ 310 (421)
T 3nrn_A 243 ETVKLI-G-RDYFDRDYLKQVDSI-EPSEGIKFNLAVPGEPR--IGNTIV-FTPGL-----M-INGFNEPSALDKSLARE 310 (421)
T ss_dssp HHHHHH-C-GGGSCHHHHHHHHTC-CCCCEEEEEEEEESSCS--SCSSEE-ECTTS-----S-SCEEECGGGTCGGGSCT
T ss_pred HHHHhc-C-cccCCHHHHHHHhCC-CCCceEEEEEEEcCCcc--cCCeEE-EcCCc-----c-eeeEeccCCCCCCcCCC
Confidence 222221 1 11122211 112111 12234445555676632 223333 33321 1 112333333 3478999
Q ss_pred CcEEEEEEEeeccccchHHHHHHHHHHHHhh
Q 009881 415 GMFVLYFSALCDEVNQGKKLLHAALSALQKL 445 (523)
Q Consensus 415 G~~vi~~st~~~~~~~~~~~l~~~~~~l~~~ 445 (523)
|+.+++++...... +.++.++.+++.|-..
T Consensus 311 G~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~ 340 (421)
T 3nrn_A 311 GYTLIMAHMALKNG-NVKKAIEKGWEELLEI 340 (421)
T ss_dssp TEEEEEEEEECTTC-CHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeeccc-cHHHHHHHHHHHHHHH
Confidence 99999998876543 3345567777776654
No 7
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.91 E-value=2.8e-22 Score=210.08 Aligned_cols=336 Identities=14% Similarity=0.108 Sum_probs=195.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceeccccccccc
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (523)
+||||||||++||+||+.|+++|++|+|||+++++||+++++..++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G---------------------------------- 46 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKG---------------------------------- 46 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETT----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCC----------------------------------
Confidence 5999999999999999999999999999999999999999976543
Q ss_pred cCCCceEEecCCCeEEec---ChHHHHHHhcCCcccccccccccceeeec-c--------CCceeecCCCHHHHHhcccC
Q 009881 103 QHPRNFNLDVSGPRVLFC---ADHAVDLMLKSGASHYLEFKSIDATFMLD-A--------DAKLCSVPDSRAAIFKDKSL 170 (523)
Q Consensus 103 ~~~r~f~ldl~GP~ll~~---~~~lv~lL~~~~~~~ylef~~~~~~~~~~-~--------dg~~~~vP~s~~~if~~~~l 170 (523)
|.+|. ||..+.. ...+.+++.+.|....+.... .....+. . .++.+.++.. ...+
T Consensus 47 -----~~~d~-G~~~~~~~~~~~~~~~l~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 113 (425)
T 3ka7_A 47 -----FQLSS-GAFHMLPNGPGGPLACFLKEVEASVNIVRSE-MTTVRVPLKKGNPDYVKGFKDISFNDF------PSLL 113 (425)
T ss_dssp -----EEEES-SSCSCBTTGGGSHHHHHHHHTTCCCCEEECC-CCEEEEESSTTCCSSTTCEEEEEGGGG------GGGS
T ss_pred -----cEEcC-CCceEecCCCccHHHHHHHHhCCCceEEecC-CceEEeecCCCcccccccccceehhhh------hhhC
Confidence 33444 3433321 125566677766643322211 1111111 0 1333433321 1345
Q ss_pred ChHhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHH-HHhccCCCcchhhhhcchHH
Q 009881 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYVLKTRD 249 (523)
Q Consensus 171 s~~~k~~L~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~~l~~-~i~l~~~~~~~~~~~~s~~~ 249 (523)
++.++..+.+.+..... ....+.++.+|++++..++.++.++.. ..... ..++ ..+++..
T Consensus 114 ~~~~~~~~~~~~~~~~~---------------~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~s~~~ 174 (425)
T 3ka7_A 114 SYKDRMKIALLIVSTRK---------------NRPSGSSLQAWIKSQVSDEWLIKFADSFCGWAL--SLKS--DEVPVEE 174 (425)
T ss_dssp CHHHHHHHHHHHHHTTT---------------SCCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHH--SSCG--GGSBHHH
T ss_pred CHHHHHHHHHHHHhhhh---------------cCCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHh--CCCc--ccchHHH
Confidence 56666655544332110 012357899999987667666665431 11111 1121 2355555
Q ss_pred HHHHHHHHHHhhhcccCCCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCE
Q 009881 250 GINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (523)
Q Consensus 250 ~l~~~~~~l~s~g~~g~~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~ 329 (523)
.+..+..+. .++ + ..+|++|++.|+++|.+.++..|++|+++++|++|..+ ++++++|++ +|++++||+
T Consensus 175 ~~~~~~~~~----~~~---~-~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~~~gv~~-~g~~~~ad~ 243 (425)
T 3ka7_A 175 VFEIIENMY----RFG---G-TGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIE--NGKAAGIIA-DDRIHDADL 243 (425)
T ss_dssp HHHHHHHHH----HHC---S-CEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEE-TTEEEECSE
T ss_pred HHHHHHHHH----hcC---C-ccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEE--CCEEEEEEE-CCEEEECCE
Confidence 444444321 222 1 46899999999999999999999999999999999987 677778886 588999999
Q ss_pred EEEC-CCCCCCCCCcccc-hhhhhh-hhhcccCCCcceEEEEEEEecCCCCCCCCceEEEcCCCCCCCCCCceEEEEEeC
Q 009881 330 LVLD-PSFTVPGSLASSH-QQLQES-FQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLG 406 (523)
Q Consensus 330 VI~~-p~~~~~~l~~~~~-~~l~~~-~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~p~~~~~~~~~~~v~v~~~s 406 (523)
||++ +.+....++.... .+.+.. ++.+.+ .......+..+.+++++.. ...+.+++.. .....+...|
T Consensus 244 VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~v~l~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~s 314 (425)
T 3ka7_A 244 VISNLGHAATAVLCSEALSKEADAAYFKMVGT-LQPSAGIKICLAADEPLVG---HTGVLLTPYT-----RRINGVNEVT 314 (425)
T ss_dssp EEECSCHHHHHHHTTTTCCTTTTHHHHHHHHH-CCCBEEEEEEEEESSCSSC---SSSEEECCSS-----SSEEEEECGG
T ss_pred EEECCCHHHHHHhcCCcccccCCHHHHHHhhC-cCCCceEEEEeecCCCccC---cCEEEECCCh-----hhcceEEecc
Confidence 9975 3322222221110 000111 122211 1133345555567877532 2233444321 1223344444
Q ss_pred C-CCCcCCCCcEEEEEEEeecc--ccchHHHHHHHHHHHHh
Q 009881 407 G-NLAVCPLGMFVLYFSALCDE--VNQGKKLLHAALSALQK 444 (523)
Q Consensus 407 ~-~~~~cP~G~~vi~~st~~~~--~~~~~~~l~~~~~~l~~ 444 (523)
. ++..+|+|+.++++...... .+..++.++.+++.|-.
T Consensus 315 ~~~p~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 355 (425)
T 3ka7_A 315 QADPELAPPGKHLTMCHQYVAPENVKNLESEIEMGLEDLKE 355 (425)
T ss_dssp GTCGGGSCTTCEEEEEEEEECGGGGGGHHHHHHHHHHHHHH
T ss_pred CCCCCcCCCCCeEEEEEeccccccccchHHHHHHHHHHHHH
Confidence 3 35789999999988765422 11223555666665554
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.90 E-value=3.1e-22 Score=213.25 Aligned_cols=328 Identities=15% Similarity=0.161 Sum_probs=193.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceecccccccc
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLL 101 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (523)
.+||||||+|++||+||..|+++|++|+|+|+++++||+++|++.+
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~---------------------------------- 61 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALA---------------------------------- 61 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEET----------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccC----------------------------------
Confidence 5799999999999999999999999999999999999999997643
Q ss_pred ccCCCceEEecCCCeEEec-ChHHHHHHhcCCcccccccccc--cceeeeccCCceeecCCCHHHHHhcccCChHhHHHH
Q 009881 102 SQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSI--DATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (523)
Q Consensus 102 ~~~~r~f~ldl~GP~ll~~-~~~lv~lL~~~~~~~ylef~~~--~~~~~~~~dg~~~~vP~s~~~if~~~~ls~~~k~~L 178 (523)
++.+|. |++++.. ...+.+++.+.|+...+.+... ...+++. +|+.+.+|.+..+.+....++..++..+
T Consensus 62 -----g~~~~~-g~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~~~~~~~~ 134 (478)
T 2ivd_A 62 -----GYLVEQ-GPNSFLDREPATRALAAALNLEGRIRAADPAAKRRYVYT-RGRLRSVPASPPAFLASDILPLGARLRV 134 (478)
T ss_dssp -----TEEEES-SCCCEETTCHHHHHHHHHTTCGGGEECSCSSCCCEEEEE-TTEEEECCCSHHHHHTCSSSCHHHHHHH
T ss_pred -----Ceeeec-ChhhhhhhhHHHHHHHHHcCCcceeeecCccccceEEEE-CCEEEECCCCHHHhccCCCCCHHHHHHH
Confidence 245666 5777655 3467788888888765543321 1233443 7888889988766666555544433221
Q ss_pred HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHH-hccCCCcchhhhhcchHHHHHHHHHH
Q 009881 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAI-AMADYDQEVSEYVLKTRDGINRLALY 257 (523)
Q Consensus 179 ~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~~l~~~i-~l~~~~~~~~~~~~s~~~~l~~~~~~ 257 (523)
+...... . .....+.++.+|+++..-++.++.++...+ .. +..++ .++++...+..+..+
T Consensus 135 ------~~~~~~~-~--------~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~s~~~~~~~~~~~ 195 (478)
T 2ivd_A 135 ------AGELFSR-R--------APEGVDESLAAFGRRHLGHRATQVLLDAVQTGI--YAGDV--EQLSVAATFPMLVKM 195 (478)
T ss_dssp ------HGGGGCC-C--------CCTTCCCBHHHHHHHHTCHHHHHHTHHHHHHHH--HCCCT--TTBBHHHHCHHHHHH
T ss_pred ------hhhhhcC-C--------CCCCCCCCHHHHHHHhhCHHHHHHHHHHHhcee--ecCCH--HHhhHHHHhHHHHHH
Confidence 1122110 0 012456899999997433333333332111 11 11121 235555444444332
Q ss_pred HHhhhc------------------ccCC---CccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEE
Q 009881 258 NSSIGR------------------FQNA---LGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKG 316 (523)
Q Consensus 258 l~s~g~------------------~g~~---~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~g 316 (523)
....+. .+.. .+.+.+|++|++.|+++|.+.+ |++|+++++|++|..+ +++ +.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~--~~~-~~ 269 (478)
T 2ivd_A 196 EREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLARE--DGG-WR 269 (478)
T ss_dssp HHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC----C-CE
T ss_pred HHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEec--CCe-EE
Confidence 211110 0000 0236799999999999888654 7899999999999875 444 57
Q ss_pred EEe---CCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCCCCceEEEcCCCCC
Q 009881 317 VRL---ASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSL 392 (523)
Q Consensus 317 V~l---~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~p~~~~ 392 (523)
|++ .+|++++||+||++ |...+..++ ++++..+....+...+..+.+..+.+++++.+.+....+.+|...
T Consensus 270 v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll----~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~- 344 (478)
T 2ivd_A 270 LIIEEHGRRAELSVAQVVLAAPAHATAKLL----RPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEE- 344 (478)
T ss_dssp EEEEETTEEEEEECSEEEECSCHHHHHHHH----TTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGG-
T ss_pred EEEeecCCCceEEcCEEEECCCHHHHHHHh----hccCHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCC-
Confidence 877 68889999999975 332222221 123322222112223556778888888876433223334455321
Q ss_pred CCCCCceEEEEEeCC-CCCcCCCCcEEEEEEE
Q 009881 393 FPEQVTSIRVLQLGG-NLAVCPLGMFVLYFSA 423 (523)
Q Consensus 393 ~~~~~~~v~v~~~s~-~~~~cP~G~~vi~~st 423 (523)
......+...+. ....+|+|..++.+..
T Consensus 345 ---~~~~~~~~~~s~~~~~~~p~g~~~l~~~~ 373 (478)
T 2ivd_A 345 ---QRRMLGAIHASTTFPFRAEGGRVLYSCMV 373 (478)
T ss_dssp ---CCSCCEEEEHHHHCGGGBSTTCEEEEEEE
T ss_pred ---CCceEEEEEEcccCCCcCCCCCEEEEEEe
Confidence 111222333332 2356788877665544
No 9
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.88 E-value=1.5e-21 Score=210.41 Aligned_cols=296 Identities=14% Similarity=0.091 Sum_probs=182.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceeccccccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (523)
..+||||||||++||+||..|+++|++|+|+|+++++||++++++.+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~--------------------------------- 49 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQ--------------------------------- 49 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCT---------------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccC---------------------------------
Confidence 45799999999999999999999999999999999999999997642
Q ss_pred cccCCCceEEecCCCeEEec-ChHHHHHHhcCCcccccccccccceeeeccCCceeecCCCHHHHHhcccCChHhHHHHH
Q 009881 101 LSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (523)
Q Consensus 101 ~~~~~r~f~ldl~GP~ll~~-~~~lv~lL~~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s~~~if~~~~ls~~~k~~L~ 179 (523)
..+.+|+ |++++.. ...+.+++.+.|+..+..+... ..++..+|+.+.++.. +. ..+++.+...+.
T Consensus 50 -----~g~~~d~-G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~--~~~~~~~g~~~~~~~~----~p-~~~~~~~~~~~~ 116 (520)
T 1s3e_A 50 -----KVKYVDL-GGSYVGPTQNRILRLAKELGLETYKVNEVE--RLIHHVKGKSYPFRGP----FP-PVWNPITYLDHN 116 (520)
T ss_dssp -----TTSCEES-SCCEECTTCHHHHHHHHHTTCCEEECCCSS--EEEEEETTEEEEECSS----SC-CCCSHHHHHHHH
T ss_pred -----CCccccc-CceEecCCcHHHHHHHHHcCCcceecccCC--ceEEEECCEEEEecCC----CC-CCCCHHHHHHHH
Confidence 1234566 5777654 3467788888888765543322 1222236666655432 00 012333333444
Q ss_pred HHHHHHHhhcccCcccccc-ccccccccCCcHHHHHHhcCCChhHHHHHHHHHhccCCCcchhhhhcchHHHHHHHHHHH
Q 009881 180 RFFKLVQGHLSLDESEENN-VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (523)
Q Consensus 180 ~fl~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~efl~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~~l~~~~~~l 258 (523)
+++..+.+........... .....++.+.++.+|+++...++.++.++...... .+..++ .++++...+. ++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~-~~g~~~--~~~s~~~~~~----~~ 189 (520)
T 1s3e_A 117 NFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNL-CVTAET--HEVSALWFLW----YV 189 (520)
T ss_dssp HHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHH-HHSSCT--TTSBHHHHHH----HH
T ss_pred HHHHHHHHHHhhcCcCCCccccchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhh-hcCCCh--HHhHHHHHHH----HH
Confidence 4444333322111000000 00012356789999999988888887765422111 011122 2345554433 33
Q ss_pred Hhhhcc----cC-CCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 259 SSIGRF----QN-ALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 259 ~s~g~~----g~-~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
...|.+ .. ..+...++++|+++|+++|++. .|++|++|++|++|..+ ++++ .|++.+|+++.||+||++
T Consensus 190 ~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~--~~~v-~v~~~~g~~~~ad~VI~a 263 (520)
T 1s3e_A 190 KQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDL---LGDRVKLERPVIYIDQT--RENV-LVETLNHEMYEAKYVISA 263 (520)
T ss_dssp HTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHH---HGGGEESSCCEEEEECS--SSSE-EEEETTSCEEEESEEEEC
T ss_pred hhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHH---cCCcEEcCCeeEEEEEC--CCeE-EEEECCCeEEEeCEEEEC
Confidence 222211 10 1122568999999999988764 48899999999999875 4554 488889999999999975
Q ss_pred -CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCC
Q 009881 334 -PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (523)
Q Consensus 334 -p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~ 377 (523)
|...+..+ .+++++|..+....++..++.+.+..+.+++++-
T Consensus 264 ~p~~~l~~l--~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w 306 (520)
T 1s3e_A 264 IPPTLGMKI--HFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFW 306 (520)
T ss_dssp SCGGGGGGS--EEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGG
T ss_pred CCHHHHcce--eeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcc
Confidence 43333333 2455566655444344456778888888998863
No 10
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.88 E-value=5.7e-21 Score=202.03 Aligned_cols=292 Identities=11% Similarity=0.108 Sum_probs=173.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceecccccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (523)
+.++||||||+|++||+||+.|+++|++|+|+|+++++||++.++..++
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g------------------------------- 51 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDG------------------------------- 51 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETT-------------------------------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCC-------------------------------
Confidence 4568999999999999999999999999999999999999999865422
Q ss_pred ccccCCCceEEecCCCeEEec-ChHHHHHHhcCCcccccccccccceeeeccCCceeecCCCHHHHHhcccCChHhHHHH
Q 009881 100 LLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (523)
Q Consensus 100 ~~~~~~r~f~ldl~GP~ll~~-~~~lv~lL~~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s~~~if~~~~ls~~~k~~L 178 (523)
+.+|+ |++++.. ...+.+++.+.|+..+..+......+. ..+|+.+.+.... ..+++.....+
T Consensus 52 --------~~~~~-g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~~~~~~~------~~~~~~~~~~~ 115 (453)
T 2yg5_A 52 --------AVLEI-GGQWVSPDQTALISLLDELGLKTFERYREGESVYI-SSAGERTRYTGDS------FPTNETTKKEM 115 (453)
T ss_dssp --------EEEEC-SCCCBCTTCHHHHHHHHHTTCCEEECCCCSEEEEE-CTTSCEEEECSSS------CSCCHHHHHHH
T ss_pred --------ceecc-CCeEecCccHHHHHHHHHcCCcccccccCCCEEEE-eCCCceeeccCCC------CCCChhhHHHH
Confidence 23444 3554432 346778888888876655443222222 2125554443210 01122222222
Q ss_pred HHHHHHHHh----hcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhccCCCcchhhh-hcchHHHHHH
Q 009881 179 MRFFKLVQG----HLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEY-VLKTRDGINR 253 (523)
Q Consensus 179 ~~fl~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~~l~~~i~l~~~~~~~~~~-~~s~~~~l~~ 253 (523)
.+++..+.. .....+.. ......+.+.++.+|+++++.++.++.++...+ ...+..++ . ++++...+..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~s~~~~~~~ 189 (453)
T 2yg5_A 116 DRLIDEMDDLAAQIGAEEPWA---HPLARDLDTVSFKQWLINQSDDAEARDNIGLFI-AGGMLTKP--AHSFSALQAVLM 189 (453)
T ss_dssp HHHHHHHHHHHHHHCSSCGGG---STTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHH-CCCCCCSC--TTSSBHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCC---CcchhhhhhccHHHHHHhhcCCHHHHHHHHHHH-HhhcccCC--cccccHHHHHHH
Confidence 222222111 11100100 000123457899999999888888888654322 12222222 2 3555544332
Q ss_pred HHHHHHhhhccc----CCCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCE
Q 009881 254 LALYNSSIGRFQ----NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (523)
Q Consensus 254 ~~~~l~s~g~~g----~~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~ 329 (523)
+ ...|.+. ...+...+++||++.|++++++. .|++|+++++|++|..+ +++.+.|++ +|++++||+
T Consensus 190 ~----~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~--~~~~v~v~~-~~~~~~ad~ 259 (453)
T 2yg5_A 190 A----ASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEA---LGDDVFLNAPVRTVKWN--ESGATVLAD-GDIRVEASR 259 (453)
T ss_dssp H----HHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHH---HGGGEECSCCEEEEEEE--TTEEEEEET-TTEEEEEEE
T ss_pred h----ccCCcHhhhccCCCcceEEEcCChHHHHHHHHHh---cCCcEEcCCceEEEEEe--CCceEEEEE-CCeEEEcCE
Confidence 2 2222110 00012468999999999988764 48999999999999876 554245764 788999999
Q ss_pred EEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCC
Q 009881 330 LVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (523)
Q Consensus 330 VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l 376 (523)
||++ |...+..+ .+++++|..+....++..++.+.+..+.+++++
T Consensus 260 VI~a~p~~~~~~l--~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~ 305 (453)
T 2yg5_A 260 VILAVPPNLYSRI--SYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPF 305 (453)
T ss_dssp EEECSCGGGGGGS--EEESCCCHHHHHHGGGEEECCEEEEEEEESSCG
T ss_pred EEEcCCHHHHhcC--EeCCCCCHHHHHHHhcCCCcceEEEEEEECCCC
Confidence 9975 43333333 234455554433222233556778777788885
No 11
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.87 E-value=3.8e-21 Score=203.76 Aligned_cols=348 Identities=13% Similarity=0.139 Sum_probs=189.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCC------CeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceecc
Q 009881 22 AFDLIVIGTGLPESVISAAASASG------KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISN 95 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G------~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (523)
.+||||||||++||+||++|+++| ++|+|||+++++||++++...++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g--------------------------- 57 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDG--------------------------- 57 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTT---------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCC---------------------------
Confidence 489999999999999999999999 99999999999999999975432
Q ss_pred ccccccccCCCceEEecCCCeEEec-ChHHHHHHhcCCcccccccccccceeeeccCCceeecCCCH--------HHHHh
Q 009881 96 YASRLLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSR--------AAIFK 166 (523)
Q Consensus 96 ~~~~~~~~~~r~f~ldl~GP~ll~~-~~~lv~lL~~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s~--------~~if~ 166 (523)
+.+|. |++.+.. ...+.+++.+.|+...+........+++. +|++..+|... ...++
T Consensus 58 ------------~~~d~-G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~p~~~~~~~~ 123 (470)
T 3i6d_A 58 ------------YIIER-GPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLV-NRTLHPMPKGAVMGIPTKIAPFVS 123 (470)
T ss_dssp ------------CCEES-SCCCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEEC-SSCEEECCC---------------
T ss_pred ------------EEecc-ChhhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEE-CCEEEECCCCcccCCcCchHHhhc
Confidence 33455 4654433 34677888888887655433233344443 77777776532 11111
Q ss_pred cccCChHhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhccCCCcchhhhhcc
Q 009881 167 DKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLK 246 (523)
Q Consensus 167 ~~~ls~~~k~~L~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s 246 (523)
...++..++... ...... .. .....+.++.+|+++..-.+....++. .+....+..+. .+++
T Consensus 124 ~~~~~~~~~~~~--~~~~~~---~~----------~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~s 185 (470)
T 3i6d_A 124 TGLFSLSGKARA--AMDFIL---PA----------SKTKDDQSLGEFFRRRVGDEVVENLIE-PLLSGIYAGDI--DKLS 185 (470)
T ss_dssp ------CCSHHH--HHHHHS---CC----------CSSSSCCBHHHHHHHHSCHHHHHHTHH-HHHHHTTCSCT--TTBB
T ss_pred cCcCCHHHHHHH--hcCccc---CC----------CCCCCCcCHHHHHHHhcCHHHHHHhcc-chhcEEecCCH--HHhh
Confidence 222222111110 001000 00 123456899999987433333333322 11111122222 2244
Q ss_pred hHHHHHHHHHHHHhhhccc-----------------CCCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEec
Q 009881 247 TRDGINRLALYNSSIGRFQ-----------------NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQ 309 (523)
Q Consensus 247 ~~~~l~~~~~~l~s~g~~g-----------------~~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~ 309 (523)
+...+..+..+....+... ...+.+.++++|++.|+++|++.+.. ++|+++++|++|..+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~- 262 (470)
T 3i6d_A 186 LMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHS- 262 (470)
T ss_dssp HHHHCGGGCC-------------------------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEEC-
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEc-
Confidence 4433322211111111000 00124778999999999988764432 799999999999876
Q ss_pred CCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCCC-CceEEEc
Q 009881 310 NSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDL-SNFLVIF 387 (523)
Q Consensus 310 ~~g~~~gV~l~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~~-~~~~~~~ 387 (523)
+++ +.|++.+|++++||+||+. |...+..++ .++++.+..+ ...+..+.+..+.+++++-+.+ ....+++
T Consensus 263 -~~~-~~v~~~~g~~~~ad~vi~a~p~~~~~~l~--~~~~~~~~~~----~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~ 334 (470)
T 3i6d_A 263 -GSC-YSLELDNGVTLDADSVIVTAPHKAAAGML--SELPAISHLK----NMHSTSVANVALGFPEGSVQMEHEGTGFVI 334 (470)
T ss_dssp -SSS-EEEEESSSCEEEESEEEECSCHHHHHHHT--TTSTTHHHHH----TCEEEEEEEEEEEESSTTCCCSSCSSEEEE
T ss_pred -CCe-EEEEECCCCEEECCEEEECCCHHHHHHHc--CCchhhHHHh----cCCCCceEEEEEEECchhcCCCCCCeEEEc
Confidence 444 5788889989999999964 433322221 1112222222 2235667777778898865332 2334455
Q ss_pred CCCCCCCCCCceEEEEEeCC--CCCcCCCCcEEEEEEEeecc-----ccchHHHHHHHHHHHHh
Q 009881 388 PPRSLFPEQVTSIRVLQLGG--NLAVCPLGMFVLYFSALCDE-----VNQGKKLLHAALSALQK 444 (523)
Q Consensus 388 p~~~~~~~~~~~v~v~~~s~--~~~~cP~G~~vi~~st~~~~-----~~~~~~~l~~~~~~l~~ 444 (523)
|... ...+......+ ....+|.|..++.+...... ....++.++.+++.|-.
T Consensus 335 ~~~~-----~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 393 (470)
T 3i6d_A 335 SRNS-----DFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKK 393 (470)
T ss_dssp CSTT-----CCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGG
T ss_pred cCCC-----CCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHHH
Confidence 5332 12333333332 23567888877766542221 11234555555555554
No 12
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.86 E-value=1.6e-20 Score=201.41 Aligned_cols=360 Identities=12% Similarity=0.085 Sum_probs=195.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceeccccccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (523)
..+||||||+|++||+||+.|+++|++|+|+|+++++||+++++..+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~--------------------------------- 58 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQD--------------------------------- 58 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEET---------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccC---------------------------------
Confidence 45899999999999999999999999999999999999999997542
Q ss_pred cccCCCceEEecCCCeEEec-ChHHHHHHhcCCcccccccccccc-eeeeccCCceeecCCCHHHHHhcccCChHhHHHH
Q 009881 101 LSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDA-TFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (523)
Q Consensus 101 ~~~~~r~f~ldl~GP~ll~~-~~~lv~lL~~~~~~~ylef~~~~~-~~~~~~dg~~~~vP~s~~~if~~~~ls~~~k~~L 178 (523)
++.+|. |++++.. ...+.+++.+.|+...+.|..... .+++ .+|+.+.+|.+...++....++..+|..+
T Consensus 59 ------g~~~~~-g~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~-~~g~~~~~p~~~~~~~~~~~~~~~~~~~~ 130 (504)
T 1sez_A 59 ------GLIWDE-GANTMTESEGDVTFLIDSLGLREKQQFPLSQNKRYIA-RNGTPVLLPSNPIDLIKSNFLSTGSKLQM 130 (504)
T ss_dssp ------TEEEES-SCCCBCCCSHHHHHHHHHTTCGGGEECCSSCCCEEEE-SSSSEEECCSSHHHHHHSSSSCHHHHHHH
T ss_pred ------CeEEec-CCcccccCcHHHHHHHHHcCCcccceeccCCCceEEE-ECCeEEECCCCHHHHhccccCCHHHHHHH
Confidence 244566 5776653 346788888999877666643222 3344 48888899988766666555555444332
Q ss_pred HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHH-HHHhccCCCcchhhhhcchHHHHHHHHHH
Q 009881 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL-YAIAMADYDQEVSEYVLKTRDGINRLALY 257 (523)
Q Consensus 179 ~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~~l~-~~i~l~~~~~~~~~~~~s~~~~l~~~~~~ 257 (523)
. .......... . .. ....+.++.+|+++..-++.++.++. +.... +..++ .++++...+..+...
T Consensus 131 ~--~~~~~~~~~~-~-----~~--~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~s~~~~~~~~~~~ 196 (504)
T 1sez_A 131 L--LEPILWKNKK-L-----SQ--VSDSHESVSGFFQRHFGKEVVDYLIDPFVAGT--CGGDP--DSLSMHHSFPELWNL 196 (504)
T ss_dssp H--THHHHC------------------CCCBHHHHHHHHHCHHHHHTTHHHHHHHH--HSCCG--GGSBHHHHCHHHHHH
T ss_pred h--HhhhccCccc-c-----cc--cCCCCccHHHHHHHHcCHHHHHHHHHHHHccc--cCCCh--HHhhHHHHhHHHHHH
Confidence 1 1111110000 0 00 12345899999986532333333332 11111 11222 234554433322221
Q ss_pred HHh------------hhcccC-------------CCccEEeecCCcChHHHHHHHHHHHcC-cEEEcCCceeEEEEecCC
Q 009881 258 NSS------------IGRFQN-------------ALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNS 311 (523)
Q Consensus 258 l~s------------~g~~g~-------------~~~~~~~p~gG~~eL~qal~r~~a~~G-g~~~L~~~V~~I~~~~~~ 311 (523)
... +...+. ....+++++||+++|+++|++ .+| ++|++|++|++|..++ +
T Consensus 197 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~---~l~~~~i~~~~~V~~I~~~~-~ 272 (504)
T 1sez_A 197 EKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICK---DLREDELRLNSRVLELSCSC-T 272 (504)
T ss_dssp HHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTHHHHHHHHT---TSCTTTEETTCCEEEEEEEC-S
T ss_pred HHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHHHHHHHHHHh---hcccceEEcCCeEEEEEecC-C
Confidence 111 011000 001256899999999998875 456 8999999999998872 3
Q ss_pred Cc----EEEEEeC--CC---cEEEcCEEEEC-CCCCCCCCCcc-cchhhhhhhhhcccCCCcceEEEEEEEecCCCCC-C
Q 009881 312 GS----YKGVRLA--SG---QDILSHKLVLD-PSFTVPGSLAS-SHQQLQESFQAFSLSDNKGKVARGICITRSSLKP-D 379 (523)
Q Consensus 312 g~----~~gV~l~--~G---~~i~A~~VI~~-p~~~~~~l~~~-~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~-~ 379 (523)
+. .+.|++. +| ++++||+||++ |...+..++.. ...+++... + ....+..+.+..+.+++++-+ .
T Consensus 273 ~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~--l-~~~~~~~~~~v~l~~~~~~~~~~ 349 (504)
T 1sez_A 273 EDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNF--I-PEVDYVPLSVVITTFKRENVKYP 349 (504)
T ss_dssp SSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCTT--S-CCCCEEEEEEEEEEEEGGGBSSC
T ss_pred CCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCcccHHH--H-hcCCCCceEEEEEEEchhhcCCC
Confidence 31 2456554 45 67899999975 33222233210 001111111 1 112234566666667776422 2
Q ss_pred CCceEEEcCCCCCCCCCCceEEEEEeC--CCCCcCCCCcEEEEEEEeeccc-----cchHHHHHHHHHHHHh
Q 009881 380 LSNFLVIFPPRSLFPEQVTSIRVLQLG--GNLAVCPLGMFVLYFSALCDEV-----NQGKKLLHAALSALQK 444 (523)
Q Consensus 380 ~~~~~~~~p~~~~~~~~~~~v~v~~~s--~~~~~cP~G~~vi~~st~~~~~-----~~~~~~l~~~~~~l~~ 444 (523)
.....+.+|..... ....++...++ ..+..+|+|+.++...+..... ...++.++.+++.|-.
T Consensus 350 ~~~~~~l~~~~~~~--~g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~ 419 (504)
T 1sez_A 350 LEGFGVLVPSKEQQ--HGLKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQ 419 (504)
T ss_dssp CCSSEEECCGGGGG--GTCCSSEEEEHHHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHH
T ss_pred CCceEEEcCCCCCC--CCCccceEEeeccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHH
Confidence 22345556642210 00011111222 2234578898776544432211 1224455555555544
No 13
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.86 E-value=8.2e-21 Score=202.04 Aligned_cols=329 Identities=14% Similarity=0.102 Sum_probs=184.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceeccccccc
Q 009881 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (523)
+||||||||++||+||++|+++|+ +|+|||+++++||+++++...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~--------------------------------- 49 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGP--------------------------------- 49 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECT---------------------------------
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEecc---------------------------------
Confidence 699999999999999999999999 999999999999999986432
Q ss_pred cccCCCceEEecCCCeEEecC----hHHHHHHhcCCccccccccc-----ccceeeeccCCceeecCCCHHHHHhc-ccC
Q 009881 101 LSQHPRNFNLDVSGPRVLFCA----DHAVDLMLKSGASHYLEFKS-----IDATFMLDADAKLCSVPDSRAAIFKD-KSL 170 (523)
Q Consensus 101 ~~~~~r~f~ldl~GP~ll~~~----~~lv~lL~~~~~~~ylef~~-----~~~~~~~~~dg~~~~vP~s~~~if~~-~~l 170 (523)
.++.+|. ||+.+... ..+.+++.+.|+...+.... ....+++. +|+++++|.+...++.. ..+
T Consensus 50 -----~g~~~d~-G~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~ 122 (477)
T 3nks_A 50 -----NGAIFEL-GPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYV-GGALHALPTGLRGLLRPSPPF 122 (477)
T ss_dssp -----TSCEEES-SCCCBCCCHHHHHHHHHHHHHTTCGGGEEEECTTSHHHHCEEEEE-TTEEEECCCSSCC---CCTTS
T ss_pred -----CCeEEEe-CCCcccCCCcccHHHHHHHHHcCCcceeeecCCCCchhcceEEEE-CCEEEECCCChhhcccccchh
Confidence 1344566 57765443 24667788888764432221 11234443 78888888764333321 111
Q ss_pred ChHhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhccCCCcchhhhhcchHHH
Q 009881 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDG 250 (523)
Q Consensus 171 s~~~k~~L~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~~ 250 (523)
... .+.+.+ ...... .....+.++.+|+++. +.+.+.+.+...+....+..+. .++++...
T Consensus 123 ~~~---~~~~~~---~~~~~~----------~~~~~~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~--~~ls~~~~ 183 (477)
T 3nks_A 123 SKP---LFWAGL---RELTKP----------RGKEPDETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNS--RELSIRSC 183 (477)
T ss_dssp CSC---SSHHHH---TTTTSC----------CCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCT--TTBBHHHH
T ss_pred hhH---HHHHHH---HhhhcC----------CCCCCCcCHHHHHHHh-hCHHHHHHHHHHHhcccccCCH--HHhhHHHH
Confidence 111 111111 111110 1123467999999863 2233322221111101111222 23556555
Q ss_pred HHHHHHHHHhhhcc----------------------cCCCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEe
Q 009881 251 INRLALYNSSIGRF----------------------QNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (523)
Q Consensus 251 l~~~~~~l~s~g~~----------------------g~~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~ 308 (523)
+..+.......+.. ......++++++|++.|+++|++.+...|++|+++++|++|..+
T Consensus 184 ~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~ 263 (477)
T 3nks_A 184 FPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQ 263 (477)
T ss_dssp CHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEC
T ss_pred HHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEc
Confidence 44443322111100 00011367999999999999999999999999999999999876
Q ss_pred cCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCCCCceEEEc
Q 009881 309 QNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIF 387 (523)
Q Consensus 309 ~~~g~~~gV~l~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~ 387 (523)
+++.+.|++ +|+++.||+||++ |.+.+..++.+..+++. ..+.+ ..+..+....+.+++++.+.. ..-..+
T Consensus 264 --~~~~~~v~~-~~~~~~ad~vv~a~p~~~~~~ll~~~~~~~~---~~l~~-~~~~~~~~v~l~~~~~~~~~~-~~g~l~ 335 (477)
T 3nks_A 264 --AEGRWKVSL-RDSSLEADHVISAIPASVLSELLPAEAAPLA---RALSA-ITAVSVAVVNLQYQGAHLPVQ-GFGHLV 335 (477)
T ss_dssp --GGGCEEEEC-SSCEEEESEEEECSCHHHHHHHSCGGGHHHH---HHHHT-CCEEEEEEEEEEETTCCCSSC-SSEEEC
T ss_pred --CCceEEEEE-CCeEEEcCEEEECCCHHHHHHhccccCHHHH---HHHhc-CCCCcEEEEEEEECCCCCCCC-CceEEc
Confidence 444456764 6778999999975 43332222212222222 22221 234556666677888765433 234455
Q ss_pred CCCCCCCCCCceEEEEEeCCC--CCcC-CCCcEEEEEEE
Q 009881 388 PPRSLFPEQVTSIRVLQLGGN--LAVC-PLGMFVLYFSA 423 (523)
Q Consensus 388 p~~~~~~~~~~~v~v~~~s~~--~~~c-P~G~~vi~~st 423 (523)
|+.. ...+....+.+. .+.. |+|..++.+..
T Consensus 336 ~~~~-----~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~ 369 (477)
T 3nks_A 336 PSSE-----DPGVLGIVYDSVAFPEQDGSPPGLRVTVML 369 (477)
T ss_dssp CTTT-----CSSEEEEECHHHHCGGGSTTTTCEEEEEEE
T ss_pred cCCC-----CCCceEEEEeccccCCCCCCCCceEEEEEE
Confidence 5432 122333344332 2222 33777775554
No 14
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.86 E-value=2.9e-20 Score=197.94 Aligned_cols=328 Identities=15% Similarity=0.170 Sum_probs=189.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC--CeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceecccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G--~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (523)
|..+||||||+|++||++|+.|+++| ++|+|||+++++||++++....+
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g----------------------------- 52 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDG----------------------------- 52 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTT-----------------------------
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCC-----------------------------
Confidence 34689999999999999999999999 99999999999999999875432
Q ss_pred ccccccCCCceEEecCCCeEEec-ChHHHHHHhcCCcccccccccccceeeeccCCceeecCCC--------HHHHHhcc
Q 009881 98 SRLLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDS--------RAAIFKDK 168 (523)
Q Consensus 98 ~~~~~~~~r~f~ldl~GP~ll~~-~~~lv~lL~~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s--------~~~if~~~ 168 (523)
+.+|. |++.+.. ...+.+++.+.|+...+........+++. +|++..+|.. ...+++..
T Consensus 53 ----------~~~~~-g~~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~p~~~~~~~~~~ 120 (475)
T 3lov_A 53 ----------FTIER-GPDSYVARKHILTDLIEAIGLGEKLVRNNTSQAFILD-TGGLHPIPKGAVMGIPTDLDLFRQTT 120 (475)
T ss_dssp ----------CCEES-SCCCEETTSTHHHHHHHHTTCGGGEEECCCCCEEEEE-TTEEEECCSSEETTEESCHHHHTTCS
T ss_pred ----------EEEec-CchhhhcccHHHHHHHHHcCCcceEeecCCCceEEEE-CCEEEECCCcccccCcCchHHHhhcc
Confidence 33444 4554433 34678888888887655433233344443 7777777653 34555556
Q ss_pred cCChHhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhccCCCcchhhhhcchH
Q 009881 169 SLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTR 248 (523)
Q Consensus 169 ~ls~~~k~~L~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~ 248 (523)
.++..+|..+..++ ..... .......+.++.+|+++. ..+.+...+...+....+..+. .++++.
T Consensus 121 ~~~~~~~~~~~~~~---~~~~~---------~~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~--~~ls~~ 185 (475)
T 3lov_A 121 LLTEEEKQEVADLL---LHPSD---------SLRIPEQDIPLGEYLRPR-LGDALVEKLIEPLLSGIYAGNI--DQMSTF 185 (475)
T ss_dssp SSCHHHHHHHHHHH---HSCCT---------TCCCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHGGGCCCT--TTSBST
T ss_pred CCChhHHHHhhCcc---cCCcc---------cccCCCCCcCHHHHHHHH-hCHHHHHHHHHHHhceeecCCh--HHcCHH
Confidence 66665554222221 11100 001134568999999863 3333333222111111122222 234554
Q ss_pred HHHHHHHHHHHhhhcc-------c-------------CCCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEe
Q 009881 249 DGINRLALYNSSIGRF-------Q-------------NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (523)
Q Consensus 249 ~~l~~~~~~l~s~g~~-------g-------------~~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~ 308 (523)
..+..+..+....+.+ . ...+.+.++++|++.|++++++.+.. ++|+++++|++|..+
T Consensus 186 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~ 263 (475)
T 3lov_A 186 ATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISRE 263 (475)
T ss_dssp TTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEE
T ss_pred HHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEe
Confidence 4444443332222110 0 00134788999999999988764432 799999999999876
Q ss_pred cCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCCCCceEEEc
Q 009881 309 QNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIF 387 (523)
Q Consensus 309 ~~~g~~~gV~l~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~ 387 (523)
+++ +.|++.+| +++||+||+. |.+.+..++ .++++ +. + ....+..+.+..+.+++++........+++
T Consensus 264 --~~~-~~v~~~~g-~~~ad~vV~a~p~~~~~~ll--~~~~~-~~---~-~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~ 332 (475)
T 3lov_A 264 --DGR-YRLKTDHG-PEYADYVLLTIPHPQVVQLL--PDAHL-PE---L-EQLTTHSTATVTMIFDQQQSLPIEGTGFVV 332 (475)
T ss_dssp --TTE-EEEECTTC-CEEESEEEECSCHHHHHHHC--TTSCC-HH---H-HTCCEEEEEEEEEEEECCSSCSSSSSEEEE
T ss_pred --CCE-EEEEECCC-eEECCEEEECCCHHHHHHHc--CccCH-HH---H-hcCCCCeEEEEEEEECCcCCCCCCCEEEEe
Confidence 444 56887888 7999999964 433322221 11111 11 1 122356677777888998722222334455
Q ss_pred CCCCCCCCCCceEEEEEeCCC--CCcCCCCcEEEEEE
Q 009881 388 PPRSLFPEQVTSIRVLQLGGN--LAVCPLGMFVLYFS 422 (523)
Q Consensus 388 p~~~~~~~~~~~v~v~~~s~~--~~~cP~G~~vi~~s 422 (523)
|+.. ...+....+.+. ....|. ..++...
T Consensus 333 ~~~~-----~~~~~~~~~~s~~~~~~~p~-~~~l~~~ 363 (475)
T 3lov_A 333 NRRA-----PYSITACTAIDQKWNHSAPD-HTVLRAF 363 (475)
T ss_dssp CTTS-----SCSEEEEEEHHHHCTTTCTT-EEEEEEE
T ss_pred cCCC-----CCceEEEEEEcccCCCCCCC-cEEEEEE
Confidence 5432 223444444332 344565 4444443
No 15
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.86 E-value=1.9e-21 Score=208.65 Aligned_cols=244 Identities=17% Similarity=0.163 Sum_probs=142.9
Q ss_pred cccEEEECCChhHHHHHHHHhhC-CCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceeccccccc
Q 009881 22 AFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~-G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (523)
.+||||||||++||+||++|+++ |++|+|||+++++||+++|+..
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~---------------------------------- 55 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVT---------------------------------- 55 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEEC----------------------------------
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEe----------------------------------
Confidence 58999999999999999999984 9999999999999999998531
Q ss_pred cccCCCceEEecCCCeEEecCh-HHHHHHhcCCcccccccccccce-eeeccCCceeecCCCHHHHHhcccCChHhHHHH
Q 009881 101 LSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDAT-FMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (523)
Q Consensus 101 ~~~~~r~f~ldl~GP~ll~~~~-~lv~lL~~~~~~~ylef~~~~~~-~~~~~dg~~~~vP~s~~~if~~~~ls~~~k~~L 178 (523)
..+|.+|. ||++++... .+.+++.+.+... .+|...++. +++ .+|+++++|... .+ ..+....+...
T Consensus 56 ----~~G~~~D~-G~h~~~~~~~~v~~l~~e~~~~~-~~~~~~~~~~~i~-~~g~~~~~p~~~-~~---~~~~~~~~~~~ 124 (513)
T 4gde_A 56 ----PEGFLYDV-GGHVIFSHYKYFDDCLDEALPKE-DDWYTHQRISYVR-CQGQWVPYPFQN-NI---SMLPKEEQVKC 124 (513)
T ss_dssp ----TTSCEEES-SCCCCCCCBHHHHHHHHHHSCSG-GGEEEEECCEEEE-ETTEEEESSGGG-GG---GGSCHHHHHHH
T ss_pred ----cCCEEEEe-CceEecCCCHHHHHHHHHhCCcc-ceeEEecCceEEE-ECCeEeecchhh-hh---hhcchhhHHHH
Confidence 13466787 688887655 4566666554322 233333332 344 388888888531 11 12222222222
Q ss_pred -HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHH--HHHhccCCCcchhhhhcchHHHH----
Q 009881 179 -MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL--YAIAMADYDQEVSEYVLKTRDGI---- 251 (523)
Q Consensus 179 -~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~~l~--~~i~l~~~~~~~~~~~~s~~~~l---- 251 (523)
..++....... .......++.+|+.+. +.+.+.+.+. +.-.... .++ .++++....
T Consensus 125 ~~~~~~~~~~~~------------~~~~~~~s~~~~~~~~-~g~~l~~~~~~~~~~~~~~--~~~--~~ls~~~~~~~~~ 187 (513)
T 4gde_A 125 IDGMIDAALEAR------------VANTKPKTFDEWIVRM-MGTGIADLFMRPYNFKVWA--VPT--TKMQCAWLGERVA 187 (513)
T ss_dssp HHHHHHHHHHHH------------TCCSCCCSHHHHHHHH-HHHHHHHHTHHHHHHHHHS--SCG--GGBCSGGGCSSCC
T ss_pred HHHHHHHHHhhh------------cccccccCHHHHHHHh-hhhhhhhhhcchhhhhhcc--CCh--HHhhHHHHHHhhc
Confidence 22222111110 0123356788887642 1122222211 1111111 111 112222111
Q ss_pred -----HHHHHHHHh--hhcccCCCccEEee-cCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCc
Q 009881 252 -----NRLALYNSS--IGRFQNALGALIYP-IYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ 323 (523)
Q Consensus 252 -----~~~~~~l~s--~g~~g~~~~~~~~p-~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~ 323 (523)
..+...+.. .+.++.. ..+.+| +||++.|+++|++.+...|++++++++|++|..+ ++ .|++.+|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~--~~---~v~~~~G~ 261 (513)
T 4gde_A 188 APNLKAVTTNVILGKTAGNWGPN-ATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNAN--NK---TVTLQDGT 261 (513)
T ss_dssp CCCHHHHHHHHHHTCCCCSCBTT-BEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETT--TT---EEEETTSC
T ss_pred ccchhhhhhhhhhcccccccccc-cceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEcc--CC---EEEEcCCC
Confidence 111111111 1111111 124454 8999999999999999999999999999999764 44 35578999
Q ss_pred EEEcCEEEEC
Q 009881 324 DILSHKLVLD 333 (523)
Q Consensus 324 ~i~A~~VI~~ 333 (523)
++.||+||++
T Consensus 262 ~~~ad~vI~t 271 (513)
T 4gde_A 262 TIGYKKLVST 271 (513)
T ss_dssp EEEEEEEEEC
T ss_pred EEECCEEEEC
Confidence 9999999975
No 16
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.86 E-value=4.6e-21 Score=205.20 Aligned_cols=295 Identities=15% Similarity=0.117 Sum_probs=175.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceeccccccccc
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (523)
+||||||+|++||+||..|+++|++|+|+|+++++||+++|++.+
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~----------------------------------- 84 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNID----------------------------------- 84 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEET-----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccC-----------------------------------
Confidence 899999999999999999999999999999999999999997542
Q ss_pred cCCCceEEecCCCeEEec-ChHHHHHHhcCCccccccccc----ccceeeeccC--CceeecCCCHHHHHhcccCChHhH
Q 009881 103 QHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKS----IDATFMLDAD--AKLCSVPDSRAAIFKDKSLGLMEK 175 (523)
Q Consensus 103 ~~~r~f~ldl~GP~ll~~-~~~lv~lL~~~~~~~ylef~~----~~~~~~~~~d--g~~~~vP~s~~~if~~~~ls~~~k 175 (523)
++.+|+ |++++.. ...+.+++.+.|+...+.... ....+++. + |+...+|.. +... .-.
T Consensus 85 ----g~~~d~-G~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~--~~~~------~~~ 150 (495)
T 2vvm_A 85 ----GYPYEM-GGTWVHWHQSHVWREITRYKMHNALSPSFNFSRGVNHFQLR-TNPTTSTYMTHE--AEDE------LLR 150 (495)
T ss_dssp ----TEEEEC-SCCCBCTTSHHHHHHHHHTTCTTCEEESCCCSSSCCEEEEE-SSTTCCEEECHH--HHHH------HHH
T ss_pred ----CeeecC-CCeEecCccHHHHHHHHHcCCcceeecccccCCCceEEEec-CCCCceeecCHH--HHHH------HHH
Confidence 345676 5777643 346778888888754433321 12233333 3 555555531 1110 001
Q ss_pred HHHHHHHH----HHHhhcccCccccccccccccccCCcHHHHHHhcC--CChhHHHHHHHHHhccCCCcchhhhhcchHH
Q 009881 176 NQLMRFFK----LVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK--LPHKIKSIVLYAIAMADYDQEVSEYVLKTRD 249 (523)
Q Consensus 176 ~~L~~fl~----~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~--l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~ 249 (523)
..+.+|++ ........ +...........+.+.|+.+||++++ .++.++.++...+... +..+. ..+++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~s~~~ 226 (495)
T 2vvm_A 151 SALHKFTNVDGTNGRTVLPF-PHDMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLC-SGGTL--ENSSFGE 226 (495)
T ss_dssp HHHHHHHCSSSSTTTTTCSC-TTSTTSSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHH-HSSCT--TTSBHHH
T ss_pred HHHHHHHccchhhhhhcCCC-CCCcccCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHh-cCCCc--chhhHHH
Confidence 11222322 11111000 00000000012345789999999887 8887776654322111 11111 2245554
Q ss_pred HHHHHHHHHHhhhcccCCCccEEeecCCcChHHHHHHHHHHHcC-cEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcC
Q 009881 250 GINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSH 328 (523)
Q Consensus 250 ~l~~~~~~l~s~g~~g~~~~~~~~p~gG~~eL~qal~r~~a~~G-g~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~ 328 (523)
.+..+......+..+... ...+++++|+++|+++|.+.+...| ++|+++++|++|..+ ++. +.|++.+|++++||
T Consensus 227 ~~~~~~~~~~~~~~~~~~-~~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad 302 (495)
T 2vvm_A 227 FLHWWAMSGYTYQGCMDC-LMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNE--RDA-ARVTARDGREFVAK 302 (495)
T ss_dssp HHHHHHHTTSSHHHHHHH-HHSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEEC--SSS-EEEEETTCCEEEEE
T ss_pred HHHHHHHcCCCHHHHHhh-hceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcC
Confidence 443322110001000000 1145789999999999999998888 999999999999875 444 56888889899999
Q ss_pred EEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCC
Q 009881 329 KLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (523)
Q Consensus 329 ~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l 376 (523)
+||+. |...+..+ .+++++|..+....+...+..+.+..+.+++++
T Consensus 303 ~vI~a~~~~~l~~i--~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~ 349 (495)
T 2vvm_A 303 RVVCTIPLNVLSTI--QFSPALSTERISAMQAGHVSMCTKVHAEVDNKD 349 (495)
T ss_dssp EEEECCCGGGGGGS--EEESCCCHHHHHHHHHCCCCCCEEEEEEESCGG
T ss_pred EEEECCCHHHHhhe--eeCCCCCHHHHHHHHhcCCCceeEEEEEECCcc
Confidence 99964 33333333 234555554433222233566778888888865
No 17
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.80 E-value=3.1e-19 Score=190.68 Aligned_cols=343 Identities=13% Similarity=0.117 Sum_probs=187.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCCCCCCcccc-cccchhhhhccCCCCCCCCCCCccccceeccccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSL-SIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G-~~VlvlE~n~~~GG~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (523)
..+||+|||+|++||++|..|+++| ++|+|+|+++++||+++++ ..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~-------------------------------- 55 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDE-------------------------------- 55 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECT--------------------------------
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecC--------------------------------
Confidence 4689999999999999999999999 8999999999999999984 22
Q ss_pred cccccCCCceEEecCCCeEEecCh-HHHHHHhcCCcccccccccccceeeeccCCceeecCCCHHHHHhcccCChHhHHH
Q 009881 99 RLLSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177 (523)
Q Consensus 99 ~~~~~~~r~f~ldl~GP~ll~~~~-~lv~lL~~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s~~~if~~~~ls~~~k~~ 177 (523)
.++.+|. |++.++... .+.+++.+.. .++..... ..+++ .+|+++.+|... .+ ..++..++..
T Consensus 56 -------~g~~~~~-g~~~~~~~~~~~~~l~~~~~-~~~~~~~~--~~~~~-~~g~~~~~P~~~--~~--~~l~~~~~~~ 119 (484)
T 4dsg_A 56 -------NGFTWDL-GGHVIFSHYQYFDDVMDWAV-QGWNVLQR--ESWVW-VRGRWVPYPFQN--NI--HRLPEQDRKR 119 (484)
T ss_dssp -------TSCEEES-SCCCBCCSBHHHHHHHHHHC-SCEEEEEC--CCEEE-ETTEEEESSGGG--CG--GGSCHHHHHH
T ss_pred -------CCcEEee-CCcccccChHHHHHHHHHHh-hhhhhccC--ceEEE-ECCEEEEeCccc--hh--hhCCHHHHHH
Confidence 2345666 466665544 4445555433 33332222 22333 378999888421 11 2233333322
Q ss_pred -HHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHH----HHHHHHhccCCCcchhhhhcchHHH--
Q 009881 178 -LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS----IVLYAIAMADYDQEVSEYVLKTRDG-- 250 (523)
Q Consensus 178 -L~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~----~l~~~i~l~~~~~~~~~~~~s~~~~-- 250 (523)
+..++.. . . . .....+.++.+|+.+. +.+.+.+ .+...+.. .++ .++++.+.
T Consensus 120 ~~~~ll~~-~-~-~-----------~~~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~----~~~--~~ls~~~~~~ 178 (484)
T 4dsg_A 120 CLDELVRS-H-A-R-----------TYTEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWA----VPP--CLMSTEWVEE 178 (484)
T ss_dssp HHHHHHHH-H-H-C-----------CCSSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHS----SCG--GGBCSSSCTT
T ss_pred HHHHHHHH-H-h-c-----------cCCCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcC----CCH--HHhcHHHHhc
Confidence 2233332 1 0 0 0123467899999853 2222211 11112211 111 12333221
Q ss_pred ------HHH-HHHHHHhhhc--ccCCCccEEeec-CCcChHHHHHHHHHHHcCcEEEcC--CceeEEEEecCCCcEEEEE
Q 009881 251 ------INR-LALYNSSIGR--FQNALGALIYPI-YGQGELPQAFCRRAAVKGCLYVLR--MPVISLLTDQNSGSYKGVR 318 (523)
Q Consensus 251 ------l~~-~~~~l~s~g~--~g~~~~~~~~p~-gG~~eL~qal~r~~a~~Gg~~~L~--~~V~~I~~~~~~g~~~gV~ 318 (523)
+.. +...+..... ++ ..+.|.||. ||++.|+++|++.+.. ..|+++ ++|++|..+ ++ +|+
T Consensus 179 r~~~~~l~~~~~~~~~~~~~~~~~-~~~~f~yp~~gG~~~l~~~la~~l~~--~~i~~~~~~~V~~I~~~--~~---~v~ 250 (484)
T 4dsg_A 179 RVAPVDLERIRRNIQENRDDLGWG-PNATFRFPQRGGTGIIYQAIKEKLPS--EKLTFNSGFQAIAIDAD--AK---TIT 250 (484)
T ss_dssp TSCCCCHHHHHHHHHHTCCCCCCS-TTSEEEEESSSCTHHHHHHHHHHSCG--GGEEECGGGCEEEEETT--TT---EEE
T ss_pred cccCCCHHHHHHHHhhcccccCCC-ccceEEeecCCCHHHHHHHHHhhhhh--CeEEECCCceeEEEEec--CC---EEE
Confidence 111 1111111100 11 123478886 8999999988874432 289999 569999764 44 355
Q ss_pred eCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCC-CCceEEEcCCCCCCCCC
Q 009881 319 LASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD-LSNFLVIFPPRSLFPEQ 396 (523)
Q Consensus 319 l~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~-~~~~~~~~p~~~~~~~~ 396 (523)
+++|+++.||+||++ |...+.+++.+..++++...........+..+....+.++.+.... +....+.+|....
T Consensus 251 ~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~---- 326 (484)
T 4dsg_A 251 FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTS---- 326 (484)
T ss_dssp ETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTC----
T ss_pred ECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCC----
Confidence 689999999999975 3322222211101112222222112223455566666678764321 2345667775432
Q ss_pred CceEEEEEeCCC-CCcCCCCcEEEEEEEeecc--ccchHHHHHHHHHHHHhh
Q 009881 397 VTSIRVLQLGGN-LAVCPLGMFVLYFSALCDE--VNQGKKLLHAALSALQKL 445 (523)
Q Consensus 397 ~~~v~v~~~s~~-~~~cP~G~~vi~~st~~~~--~~~~~~~l~~~~~~l~~~ 445 (523)
+...+..+++- ...+|+|+.++.+...... ..+.+++++.+++-|...
T Consensus 327 -~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~~~~~~d~~l~~~a~~~L~~~ 377 (484)
T 4dsg_A 327 -PFYRATVFSNYSKYNVPEGHWSLMLEVSESKYKPVNHSTLIEDCIVGCLAS 377 (484)
T ss_dssp -SCSEEECGGGTCGGGSCTTEEEEEEEEEEBTTBCCCTTSHHHHHHHHHHHT
T ss_pred -eEEEEEeecCCCcccCCCCeEEEEEEEecCcCCcCCHHHHHHHHHHHHHHc
Confidence 23355556554 4679999888876543321 113356777777777654
No 18
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.75 E-value=9.9e-18 Score=180.46 Aligned_cols=278 Identities=15% Similarity=0.162 Sum_probs=151.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceeccccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G-~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (523)
+..+||||||||++||+||..|+++| ++|+|||+++++||+++|+...
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~------------------------------- 54 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGY------------------------------- 54 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECG-------------------------------
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecC-------------------------------
Confidence 45689999999999999999999999 9999999999999999986531
Q ss_pred cccccCCCceEEecCCCeEEecC--hHHHHHHhcCCcccccccccccceeeeccCCceeecCCCHHHHHhcccCCh-HhH
Q 009881 99 RLLSQHPRNFNLDVSGPRVLFCA--DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGL-MEK 175 (523)
Q Consensus 99 ~~~~~~~r~f~ldl~GP~ll~~~--~~lv~lL~~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s~~~if~~~~ls~-~~k 175 (523)
.++.+|+ |++++... .++.+++.+.++... ...+.+. +|+...++.....+........ ...
T Consensus 55 -------~G~~~D~-G~~~~~~~~~~~~~~~~~~lg~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (516)
T 1rsg_A 55 -------QGRKYDI-GASWHHDTLTNPLFLEEAQLSLNDG------RTRFVFD-DDNFIYIDEERGRVDHDKELLLEIVD 119 (516)
T ss_dssp -------GGCEEES-SCCEECCTTTCHHHHHHHHHHHHHC------CCCEECC-CCCCEEEETTTEECTTCTTTCHHHHH
T ss_pred -------CCcEEec-CCeEEecCCCChHHHHHHHhCCCCc------ceeEEEC-CCCEEEEcCCCccccccHHHHHHHHH
Confidence 2345677 58887542 356665555443211 0011111 2332222221100000000000 001
Q ss_pred HHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhc------CCChhHHHHHHHHHh---c-cCCCcchhhhhc
Q 009881 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKM------KLPHKIKSIVLYAIA---M-ADYDQEVSEYVL 245 (523)
Q Consensus 176 ~~L~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~------~l~~~l~~~l~~~i~---l-~~~~~~~~~~~~ 245 (523)
..+.++... .... .....+.++.+|++++ .+++....++...+. . ..... ..+
T Consensus 120 ~~~~~~~~~---~~~~----------~~~~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~----~~~ 182 (516)
T 1rsg_A 120 NEMSKFAEL---EFHQ----------HLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDW----KLL 182 (516)
T ss_dssp HHHHHHHHH---HC-----------------CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHHHHTBCT----TTS
T ss_pred HHHHHHHHH---Hhhh----------ccCCCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHhCCCh----HHC
Confidence 112222221 1000 0112457888877642 233322222111110 0 00011 112
Q ss_pred chHHHHHHHHHHHHhhhcccCCCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEE
Q 009881 246 KTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDI 325 (523)
Q Consensus 246 s~~~~l~~~~~~l~s~g~~g~~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i 325 (523)
+.... +.... +...++++ ++.|+++|++.+ .++.|++|++|++|..+ ++..+.|++.+|+++
T Consensus 183 s~~~~----------~~~~~---~~~~~~~g-~~~l~~~l~~~l--~~~~i~~~~~V~~I~~~--~~~~v~v~~~~g~~~ 244 (516)
T 1rsg_A 183 SAKDT----------YFGHQ---GRNAFALN-YDSVVQRIAQSF--PQNWLKLSCEVKSITRE--PSKNVTVNCEDGTVY 244 (516)
T ss_dssp BHHHH----------CCCCS---SCCEEESC-HHHHHHHHHTTS--CGGGEETTCCEEEEEEC--TTSCEEEEETTSCEE
T ss_pred ChHHH----------Hhhcc---CcchhhhC-HHHHHHHHHHhC--CCCEEEECCEEEEEEEc--CCCeEEEEECCCcEE
Confidence 22211 00111 11346777 888888776533 24689999999999875 233368888899999
Q ss_pred EcCEEEEC-CCCCCCCC---------CcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCC
Q 009881 326 LSHKLVLD-PSFTVPGS---------LASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP 378 (523)
Q Consensus 326 ~A~~VI~~-p~~~~~~l---------~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~ 378 (523)
+||+||++ |...+... .+.+.|++|..+....+...++.+.+.++.+++++=+
T Consensus 245 ~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~ 307 (516)
T 1rsg_A 245 NADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWS 307 (516)
T ss_dssp EEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSC
T ss_pred ECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCC
Confidence 99999975 32222100 1245667777666654555678889999999998744
No 19
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.74 E-value=1.3e-16 Score=169.62 Aligned_cols=287 Identities=11% Similarity=0.103 Sum_probs=155.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceecccccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (523)
..+||+|||+|++||++|..|++.|+ +|+|+|+++++||++++....
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~-------------------------------- 50 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFA-------------------------------- 50 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEET--------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccC--------------------------------
Confidence 46899999999999999999999999 899999999999999986542
Q ss_pred ccccCCCceEEecCCCeEEec-----ChHHHHHHhc-CCccccc-ccccccceeeeccCCceeecCCCHHHHHhcccCCh
Q 009881 100 LLSQHPRNFNLDVSGPRVLFC-----ADHAVDLMLK-SGASHYL-EFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGL 172 (523)
Q Consensus 100 ~~~~~~r~f~ldl~GP~ll~~-----~~~lv~lL~~-~~~~~yl-ef~~~~~~~~~~~dg~~~~vP~s~~~if~~~~ls~ 172 (523)
.+.+|+ |++++.. ...+.+++.+ .++..+. .+... ..+++..+|+.+..+.. ...+.
T Consensus 51 -------~~~~d~-g~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~-~~~~~~~~g~~~~~~~~-~~~~~------ 114 (472)
T 1b37_A 51 -------GINVEL-GANWVEGVNGGKMNPIWPIVNSTLKLRNFRSDFDYL-AQNVYKEDGGVYDEDYV-QKRIE------ 114 (472)
T ss_dssp -------TEEEES-SCCEEEEESSSSCCTHHHHHHTTSCCCEEECCCTTG-GGCEECSSSSBCCHHHH-HHHHH------
T ss_pred -------CcEEee-CCeEEeccCCCCCCHHHHHHHhhcCCceeeccCccc-cceeEcCCCCCCCHHHH-HHHHH------
Confidence 244566 5777652 2357777877 6775542 22221 11233335655432110 01110
Q ss_pred HhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHH--HHHhcC---CChhHHHHHHHHH-hccCCCcchhhhhcc
Q 009881 173 MEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAE--FLTKMK---LPHKIKSIVLYAI-AMADYDQEVSEYVLK 246 (523)
Q Consensus 173 ~~k~~L~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e--fl~~~~---l~~~l~~~l~~~i-~l~~~~~~~~~~~~s 246 (523)
....+.+|.+.+..... ..++.+.++.+ ++.+.. ....+..++.... .+. +..+. ...+
T Consensus 115 -~~~~~~~~~~~~~~~~~-----------~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~s 179 (472)
T 1b37_A 115 -LADSVEEMGEKLSATLH-----------ASGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYE-FAEPP--RVTS 179 (472)
T ss_dssp -HHHHHHHHHHHHHHTSC-----------TTCTTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHH-HSSCG--GGBB
T ss_pred -HHHHHHHHHHHHHHhhc-----------cccchhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhh-hcccc--cccc
Confidence 00112222222211110 01223445443 554322 1111222221111 000 01110 1122
Q ss_pred hHHHHHHHHHHHHhhhcccCCCccEEeecCCcChHHHHHHHHHHHc--------CcEEEcCCceeEEEEecCCCcEEEEE
Q 009881 247 TRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVK--------GCLYVLRMPVISLLTDQNSGSYKGVR 318 (523)
Q Consensus 247 ~~~~l~~~~~~l~s~g~~g~~~~~~~~p~gG~~eL~qal~r~~a~~--------Gg~~~L~~~V~~I~~~~~~g~~~gV~ 318 (523)
...... ...| ..++.. ..+.++++|++.|+++|++.+... |++|+++++|++|..+ ++++ .|+
T Consensus 180 ~~~~~~-~~~~----~~~~~~-~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~--~~~v-~v~ 250 (472)
T 1b37_A 180 LQNTVP-LATF----SDFGDD-VYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS--PGGV-TVK 250 (472)
T ss_dssp STTTSS-CHHH----HHHCSE-EEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC--SSCE-EEE
T ss_pred hhhccc-cccc----cccCCc-eeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEc--CCcE-EEE
Confidence 211100 0011 112211 113345899999999998765443 7899999999999876 4454 588
Q ss_pred eCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCC
Q 009881 319 LASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379 (523)
Q Consensus 319 l~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~ 379 (523)
+.+|++++||+||++ |...+..+...+.+++|+.+....+...++.+.+..+.+++|+-+.
T Consensus 251 ~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~ 312 (472)
T 1b37_A 251 TEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPE 312 (472)
T ss_dssp ETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCC
T ss_pred ECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCC
Confidence 889999999999975 3332223222345566654433222233566778888889887543
No 20
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.72 E-value=1.3e-16 Score=167.29 Aligned_cols=284 Identities=15% Similarity=0.107 Sum_probs=156.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceeccccccccc
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (523)
+||||||||++|++||..|+++|++|+|||+++++||++.+.+..-
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~c---------------------------------- 47 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRN---------------------------------- 47 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSS----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccC----------------------------------
Confidence 7999999999999999999999999999999999999998865321
Q ss_pred cCCCceEEecCCCeEEec--ChHHHHHHhcCCcccccccccccceeee-ccCCceeec-CCCHHHHHhcccCChHhHHHH
Q 009881 103 QHPRNFNLDVSGPRVLFC--ADHAVDLMLKSGASHYLEFKSIDATFML-DADAKLCSV-PDSRAAIFKDKSLGLMEKNQL 178 (523)
Q Consensus 103 ~~~r~f~ldl~GP~ll~~--~~~lv~lL~~~~~~~ylef~~~~~~~~~-~~dg~~~~v-P~s~~~if~~~~ls~~~k~~L 178 (523)
...+.+++ |++++.. ...+.+++.+.|+........ ....+ ..+++.... |... ... ..-+..+
T Consensus 48 --ipg~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~ 115 (431)
T 3k7m_X 48 --VPGLRVEI-GGAYLHRKHHPRLAAELDRYGIPTAAASEF--TSFRHRLGPTAVDQAFPIPG-SEA------VAVEAAT 115 (431)
T ss_dssp --STTCEEES-SCCCBCTTTCHHHHHHHHHHTCCEEECCCC--CEECCBSCTTCCSSSSCCCG-GGH------HHHHHHH
T ss_pred --CCCceEec-CCeeeCCCCcHHHHHHHHHhCCeeeecCCC--CcEEEEecCCeecCCCCCCH-HHH------HHHHHHH
Confidence 01233455 3555533 335666666666543221111 11111 112222211 1111 110 0112223
Q ss_pred HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhccCCCcchhhhhcchHHHHHHHHHHH
Q 009881 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (523)
Q Consensus 179 ~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~~l~~~~~~l 258 (523)
.+++..........+.. .....+ .+.++.+|+++.+.++..+.++...+... +..+. .+++....+.. +
T Consensus 116 ~~l~~~~~~~~~~~~~~---~~~~~~-~d~s~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~s~~~~~~~----~ 184 (431)
T 3k7m_X 116 YTLLRDAHRIDLEKGLE---NQDLED-LDIPLNEYVDKLDLPPVSRQFLLAWAWNM-LGQPA--DQASALWMLQL----V 184 (431)
T ss_dssp HHHHHHHTTCCTTTCTT---SSSCGG-GCSBHHHHHHHHTCCHHHHHHHHHHHHHH-HSSCT--TTSBHHHHHHH----H
T ss_pred HHHHHHHHhcCCCCCcc---Ccchhh-hcCCHHHHHHhcCCCHHHHHHHHHHHHHh-cCCCh--hhhhHHHHHHH----H
Confidence 34444333321111100 001122 23899999999888887776543211110 11111 12344433322 2
Q ss_pred Hhhh------cccCCCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009881 259 SSIG------RFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (523)
Q Consensus 259 ~s~g------~~g~~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~ 332 (523)
...+ ... ... ++.+|++.+.+++. +..| +|+++++|++|..+ +++ +.|++.+|++++||+||+
T Consensus 185 ~~~~~~~~~~~~~---~~~-~~~~g~~~l~~~~~---~~~g-~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad~vi~ 253 (431)
T 3k7m_X 185 AAHHYSILGVVLS---LDE-VFSNGSADLVDAMS---QEIP-EIRLQTVVTGIDQS--GDV-VNVTVKDGHAFQAHSVIV 253 (431)
T ss_dssp HHTTSCHHHHHHT---CCE-EETTCTHHHHHHHH---TTCS-CEESSCCEEEEECS--SSS-EEEEETTSCCEEEEEEEE
T ss_pred HhcCCccceeecc---hhh-hcCCcHHHHHHHHH---hhCC-ceEeCCEEEEEEEc--CCe-EEEEECCCCEEEeCEEEE
Confidence 2211 111 113 67899998888664 4566 99999999999765 444 468888898899999997
Q ss_pred C-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCC
Q 009881 333 D-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (523)
Q Consensus 333 ~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l 376 (523)
. |...+..+ .+.|+++..+........++...+...-++.++
T Consensus 254 a~~~~~l~~i--~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~ 296 (431)
T 3k7m_X 254 ATPMNTWRRI--VFTPALPERRRSVIEEGHGGQGLKILIHVRGAE 296 (431)
T ss_dssp CSCGGGGGGS--EEESCCCHHHHHHHHHCCCCCEEEEEEEEESCC
T ss_pred ecCcchHhhe--eeCCCCCHHHHHHHHhCCCcceEEEEEEECCCC
Confidence 5 32222222 234455543333222233555677777778876
No 21
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.71 E-value=1.6e-16 Score=166.37 Aligned_cols=247 Identities=14% Similarity=0.154 Sum_probs=137.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceecccccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G-~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (523)
..+||||||||++||+||..|+++| ++|+|+|+++++||+++|++.++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G------------------------------- 53 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHG------------------------------- 53 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETT-------------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCC-------------------------------
Confidence 4589999999999999999999999 99999999999999999976432
Q ss_pred ccccCCCceEEecCCCeEEecC-hHHHHHHhcCCcccccccccccceeeeccCCceeecCCCHHHHHhcccCChHhHHHH
Q 009881 100 LLSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (523)
Q Consensus 100 ~~~~~~r~f~ldl~GP~ll~~~-~~lv~lL~~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s~~~if~~~~ls~~~k~~L 178 (523)
+.+|+ |++++... ..+.+++.+.|+... .......+. ..+|+.. +|.. +.... ......+
T Consensus 54 --------~~~d~-G~~~~~~~~~~~~~l~~~~g~~~~--~~~~~~~~~-~~~g~~~-~~~~--~~~~~----~~~~~~~ 114 (424)
T 2b9w_A 54 --------RRYEM-GAIMGVPSYDTIQEIMDRTGDKVD--GPKLRREFL-HEDGEIY-VPEK--DPVRG----PQVMAAV 114 (424)
T ss_dssp --------EECCS-SCCCBCTTCHHHHHHHHHHCCCCC--SCCCCEEEE-CTTSCEE-CGGG--CTTHH----HHHHHHH
T ss_pred --------ccccc-CceeecCCcHHHHHHHHHhCCccc--cccccceeE-cCCCCEe-cccc--Ccccc----hhHHHHH
Confidence 33444 46654333 456777777775421 111111222 2356543 2211 00000 0011122
Q ss_pred HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhccCCCcchhhhhcchHHHHHHHHHHH
Q 009881 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (523)
Q Consensus 179 ~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~~l~~~~~~l 258 (523)
.++...+.......... .......++...|+.+|+++.+.+. +.+.+...+....+. ++ .+.++...+..+...
T Consensus 115 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~--~~~~a~~~~~~~~~~- 188 (424)
T 2b9w_A 115 QKLGQLLATKYQGYDAN-GHYNKVHEDLMLPFDEFLALNGCEA-ARDLWINPFTAFGYG-HF--DNVPAAYVLKYLDFV- 188 (424)
T ss_dssp HHHHHHHHTTTTTTTSS-SSSSCCCGGGGSBHHHHHHHTTCGG-GHHHHTTTTCCCCCC-CT--TTSBHHHHHHHSCHH-
T ss_pred HHHHHHHhhhhhhcccc-cchhhhhhhhccCHHHHHHhhCcHH-HHHHHHHHHHhhccC-Ch--HhcCHHHHHHhhhHh-
Confidence 33333222211100000 0000112345689999999887764 333322111111121 11 224444332211110
Q ss_pred HhhhcccCCCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 259 ~s~g~~g~~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
..+...+ +..+++.+|++++++++. +..+..++++++|++|..+ ++++ .|++.+|+ ++||+||++
T Consensus 189 ~~~~~~~---~~~~~~~~g~~~l~~~l~---~~l~~~v~~~~~V~~i~~~--~~~v-~v~~~~g~-~~ad~Vv~a 253 (424)
T 2b9w_A 189 TMMSFAK---GDLWTWADGTQAMFEHLN---ATLEHPAERNVDITRITRE--DGKV-HIHTTDWD-RESDVLVLT 253 (424)
T ss_dssp HHHHHHH---TCCBCCTTCHHHHHHHHH---HHSSSCCBCSCCEEEEECC--TTCE-EEEESSCE-EEESEEEEC
T ss_pred hhhcccC---CceEEeCChHHHHHHHHH---HhhcceEEcCCEEEEEEEE--CCEE-EEEECCCe-EEcCEEEEC
Confidence 0011111 113478899999999775 4567789999999999875 4554 58877775 899999965
No 22
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.70 E-value=4.5e-16 Score=166.53 Aligned_cols=284 Identities=12% Similarity=0.083 Sum_probs=155.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceeccccccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (523)
..+||||||||++||++|..|++.|++|+|+|+++++||++.++....
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~-------------------------------- 79 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEE-------------------------------- 79 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETT--------------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCC--------------------------------
Confidence 458999999999999999999999999999999999999998865210
Q ss_pred cccCCCceEEecCCCeEEecCh-HHHHHHhcCCccccccccccc-ceeeeccCCceeecCC---CHHHHHhcccCChHhH
Q 009881 101 LSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSID-ATFMLDADAKLCSVPD---SRAAIFKDKSLGLMEK 175 (523)
Q Consensus 101 ~~~~~r~f~ldl~GP~ll~~~~-~lv~lL~~~~~~~ylef~~~~-~~~~~~~dg~~~~vP~---s~~~if~~~~ls~~~k 175 (523)
..+.+|+ |+.++.... .+.+++.+.|+... .|...+ ..++. .+|...+.+. .. ..+. ..+.+.++
T Consensus 80 -----~~~~~~~-g~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~-~~~~~~~~ 149 (498)
T 2iid_A 80 -----AGWYANL-GPMRLPEKHRIVREYIRKFDLRLN-EFSQENDNAWYF-IKNIRKKVGEVKKDP-GLLK-YPVKPSEA 149 (498)
T ss_dssp -----TTEEEES-SCCCEETTCHHHHHHHHHTTCCEE-EECSCCTTSEEE-ETTEEEEHHHHHHCG-GGGC-CCCCGGGT
T ss_pred -----CCchhhc-CcccccchHHHHHHHHHHhCCCce-eecccCCccEEE-eCCeeecccccccCc-cccc-cCCCcccc
Confidence 2244555 466554433 45666767776421 221111 11111 1343222110 00 0000 00111110
Q ss_pred -----H----HHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcC-CChhHHHHHHHHHhccCCCcchhhhhc
Q 009881 176 -----N----QLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK-LPHKIKSIVLYAIAMADYDQEVSEYVL 245 (523)
Q Consensus 176 -----~----~L~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~-l~~~l~~~l~~~i~l~~~~~~~~~~~~ 245 (523)
. .+.+++..+.... .......+.+.++.+|+++.+ +++..+..+...+... ... ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~----~~ 215 (498)
T 2iid_A 150 GKSAGQLYEESLGKVVEELKRTN--------CSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNED--SGY----YV 215 (498)
T ss_dssp TCCHHHHHHHHTHHHHHHHHHSC--------HHHHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCG--GGT----TS
T ss_pred CCCHHHHHHHHHHHHHHHHhhcc--------HHHHHHHhhhhhHHHHHHHccCCCHHHHHHHHHhcCcc--cch----hH
Confidence 0 1112222111110 000112345678999999866 5665554432211100 000 00
Q ss_pred chHHHHHHHHHHHHhhhcccCCCccEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCc--
Q 009881 246 KTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-- 323 (523)
Q Consensus 246 s~~~~l~~~~~~l~s~g~~g~~~~~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~-- 323 (523)
+...++.... ... .+ ..+.++++|++.|+++|.+.+ +..|+++++|++|..+ +++ +.|++.+|+
T Consensus 216 ~~~~~~~~~~----~~~-~~---~~~~~~~gG~~~l~~~l~~~l---~~~i~~~~~V~~I~~~--~~~-v~v~~~~~~~~ 281 (498)
T 2iid_A 216 SFIESLKHDD----IFA-YE---KRFDEIVDGMDKLPTAMYRDI---QDKVHFNAQVIKIQQN--DQK-VTVVYETLSKE 281 (498)
T ss_dssp BHHHHHHHHH----HHT-TC---CCEEEETTCTTHHHHHHHHHT---GGGEESSCEEEEEEEC--SSC-EEEEEECSSSC
T ss_pred HHHHHHHHHh----ccc-cC---cceEEeCCcHHHHHHHHHHhc---ccccccCCEEEEEEEC--CCe-EEEEEecCCcc
Confidence 1111111111 111 11 126789999999999887644 4489999999999876 444 467666665
Q ss_pred --EEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCC
Q 009881 324 --DILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (523)
Q Consensus 324 --~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l 376 (523)
+++||+||++ |...+..+ .++|++|..+....+...++.+.+..+.+++++
T Consensus 282 ~~~~~ad~vI~t~p~~~~~~i--~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~ 335 (498)
T 2iid_A 282 TPSVTADYVIVCTTSRAVRLI--KFNPPLLPKKAHALRSVHYRSGTKIFLTCTTKF 335 (498)
T ss_dssp CCEEEESEEEECSCHHHHTTS--EEESCCCHHHHHHHHHCCEECEEEEEEEESSCG
T ss_pred cceEEeCEEEECCChHHHhhe--ecCCCCCHHHHHHHHhCCCcceeEEEEEeCCCC
Confidence 5899999975 33322332 244556665444323334667888888889886
No 23
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.68 E-value=4.3e-16 Score=166.27 Aligned_cols=299 Identities=14% Similarity=0.110 Sum_probs=152.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceeccccccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (523)
..+||||||||++||+||..|+++|++|+|+|+++++||+++++.... .+....+. ..
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~--~~~~~~~~--------------------~~ 67 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGS--EETDLSGE--------------------TQ 67 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTC--EEECTTSC--------------------EE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCc--ccccccch--------------------hh
Confidence 468999999999999999999999999999999999999998876432 11111100 00
Q ss_pred cccCCCceEEecCCCeEEecChHHHHHHhcCCccccccccccc-ceeee-ccC----CceeecCCCHHHHHhcccCChHh
Q 009881 101 LSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSID-ATFML-DAD----AKLCSVPDSRAAIFKDKSLGLME 174 (523)
Q Consensus 101 ~~~~~r~f~ldl~GP~ll~~~~~lv~lL~~~~~~~ylef~~~~-~~~~~-~~d----g~~~~vP~s~~~if~~~~ls~~~ 174 (523)
.......+.++. |+..++....+.+++.+.|+... .+.... ..+++ ..+ |+...+|....+.+
T Consensus 68 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--------- 136 (489)
T 2jae_A 68 KCTFSEGHFYNV-GATRIPQSHITLDYCRELGVEIQ-GFGNQNANTFVNYQSDTSLSGQSVTYRAAKADTF--------- 136 (489)
T ss_dssp ECCCCTTCEEES-SCCCEETTSTHHHHHHHHTCCEE-EECCCCTTSEEECCCSSTTTTCCEEHHHHHHHHH---------
T ss_pred hhcccCCCcCCc-chhhcccHHHHHHHHHHcCCceE-EccccCCCceEEecCCcccCCccccHHHHhhhhh---------
Confidence 001123455676 57766655578888888887422 122111 12333 212 54444332111100
Q ss_pred HHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChh--------HHHHHHH--HHhccCCCcchhhhh
Q 009881 175 KNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHK--------IKSIVLY--AIAMADYDQEVSEYV 244 (523)
Q Consensus 175 k~~L~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~--------l~~~l~~--~i~l~~~~~~~~~~~ 244 (523)
..+..++....+.... . +...+..+.++.+|+++++.... +..++.. .+.+. ......
T Consensus 137 -~~~~~l~~~~~~~~~~-~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-- 204 (489)
T 2jae_A 137 -GYMSELLKKATDQGAL-D------QVLSREDKDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNF--GTEKKP-- 204 (489)
T ss_dssp -HHHHHHHHHHHHHTTT-T------TTSCHHHHHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCC--CEECCC--
T ss_pred -ccHHHHHHHHHhcccc-c------cccchhhHHHHHHHHHHhhhhhhccccccccchhhccCCCccccc--CCCCCC--
Confidence 0111111111110000 0 00011123467778775322100 0000000 00000 000000
Q ss_pred cchHHHHHH--HHHHHHhhhcccCCCccEEeecCCcChHHHHHHHHHHHcC-cEEEcCCceeEEEEecCCCcEEEEEeCC
Q 009881 245 LKTRDGINR--LALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLAS 321 (523)
Q Consensus 245 ~s~~~~l~~--~~~~l~s~g~~g~~~~~~~~p~gG~~eL~qal~r~~a~~G-g~~~L~~~V~~I~~~~~~g~~~gV~l~~ 321 (523)
... ..+.. +..++........ .+.+.++++|++.|+++|++. ++ +.|+++++|++|..+ +++ +.|++.+
T Consensus 205 ~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~---l~~~~i~~~~~V~~i~~~--~~~-v~v~~~~ 276 (489)
T 2jae_A 205 FAM-QEVIRSGIGRNFSFDFGYDQ-AMMMFTPVGGMDRIYYAFQDR---IGTDNIVFGAEVTSMKNV--SEG-VTVEYTA 276 (489)
T ss_dssp CCH-HHHHHHTTTTTGGGGGCTTT-SSSEEEETTCTTHHHHHHHHH---HCGGGEETTCEEEEEEEE--TTE-EEEEEEE
T ss_pred cCH-HHHhhhhHHHHHhhhhcccc-CccEEeecCCHHHHHHHHHHh---cCCCeEEECCEEEEEEEc--CCe-EEEEEec
Confidence 000 00000 0011111000111 123678999999999988764 45 889999999999886 454 4576666
Q ss_pred C---cEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCC
Q 009881 322 G---QDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (523)
Q Consensus 322 G---~~i~A~~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l 376 (523)
| ++++||+||++ |...+..+. . ++|..+....+...+..+.+..+.+++++
T Consensus 277 g~~~~~~~ad~vI~a~p~~~l~~l~--~--~l~~~~~~~l~~~~~~~~~kv~l~~~~~~ 331 (489)
T 2jae_A 277 GGSKKSITADYAICTIPPHLVGRLQ--N--NLPGDVLTALKAAKPSSSGKLGIEYSRRW 331 (489)
T ss_dssp TTEEEEEEESEEEECSCHHHHTTSE--E--CCCHHHHHHHHTEECCCEEEEEEEESSCH
T ss_pred CCeEEEEECCEEEECCCHHHHHhCc--c--CCCHHHHHHHHhCCCccceEEEEEeCCCC
Confidence 6 67999999975 433333332 1 23332222212223566788888888875
No 24
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.59 E-value=3e-14 Score=147.52 Aligned_cols=309 Identities=13% Similarity=0.124 Sum_probs=167.9
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccc-ccchhhhhccCCCCCCCCCCCccccceecccc
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (523)
....+||+|||||++||++|..|+++|++|+|+|+++++||++.+.. .++
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G----------------------------- 76 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAG----------------------------- 76 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTS-----------------------------
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCC-----------------------------
Confidence 44679999999999999999999999999999999999999998864 221
Q ss_pred ccccccCCCceEE-ecCCCeEEecC-hHHHHHHhcCCcccccccccccceeeeccCCceeecCCCHHHHH--hcccCChH
Q 009881 98 SRLLSQHPRNFNL-DVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIF--KDKSLGLM 173 (523)
Q Consensus 98 ~~~~~~~~r~f~l-dl~GP~ll~~~-~~lv~lL~~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s~~~if--~~~~ls~~ 173 (523)
+.+ |. |+++++.. ..+.+++.+.+... .+ ....+++. +|+++++|.+...+. ....+++.
T Consensus 77 ----------~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~-~g~l~~lP~~~~~~~~l~~~~~~~~ 140 (397)
T 3hdq_A 77 ----------VLIHPY-GPHIFHTNSKDVFEYLSRFTEWR--PY--QHRVLASV-DGQLLPIPINLDTVNRLYGLNLTSF 140 (397)
T ss_dssp ----------CEECTT-SCCCCEESCHHHHHHHHTSCCEE--EC--CCBEEEEE-TTEEEEESCCHHHHHHHHTCCCCHH
T ss_pred ----------ceEeec-CCcccCCChHHHHHHHHHhhhcc--cc--cccceEEE-CCEEEEcCCChHHHHHhhccCCCHH
Confidence 222 33 56666543 46677777666321 11 12233443 899999998764321 12223332
Q ss_pred hHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHH-HHH-HHHhccCCCcchhhhhcchHHHH
Q 009881 174 EKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGI 251 (523)
Q Consensus 174 ~k~~L~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~-~l~-~~i~l~~~~~~~~~~~~s~~~~l 251 (523)
.+..++.. . . .....+.++.+|+.+. +.+.+.+ ++. +.... +..++ +++|+...
T Consensus 141 ---~~~~~l~~---~-~-----------~~~~~~~s~~e~~~~~-~G~~~~e~~~~py~~k~--~~~~~--~~Lsa~~~- 196 (397)
T 3hdq_A 141 ---QVEEFFAS---V-A-----------EKVEQVRTSEDVVVSK-VGRDLYNKFFRGYTRKQ--WGLDP--SELDASVT- 196 (397)
T ss_dssp ---HHHHHHHH---H-C-----------CCCSSCCBHHHHHHHH-HHHHHHHHHTHHHHHHH--HSSCG--GGSBTTTG-
T ss_pred ---HHHHHHhh---c-c-----------cCCCCCcCHHHHHHHh-cCHHHHHHHHHHHhCch--hCCCH--HHHHHHHH-
Confidence 22333321 1 0 1123467999999742 2233333 222 22122 22232 33555321
Q ss_pred HHHHHHHHhhhcccCC--CccE-EeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcC
Q 009881 252 NRLALYNSSIGRFQNA--LGAL-IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSH 328 (523)
Q Consensus 252 ~~~~~~l~s~g~~g~~--~~~~-~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~ 328 (523)
.++.. ...+.+. .+.+ .+|++|.+.|.++|. +..|++|+||++|.++ ++++.+|
T Consensus 197 ~Rvp~----~~~~d~~yf~~~~qg~P~gGy~~l~e~l~---~~~g~~V~l~~~v~~~----------------~~~~~~d 253 (397)
T 3hdq_A 197 ARVPT----RTNRDNRYFADTYQAMPLHGYTRMFQNML---SSPNIKVMLNTDYREI----------------ADFIPFQ 253 (397)
T ss_dssp GGSCC----CSSCCCBSCCCSEEEEETTCHHHHHHHHT---CSTTEEEEESCCGGGT----------------TTTSCEE
T ss_pred HhcCc----ccccCccchhhhheeccCCCHHHHHHHHH---hccCCEEEECCeEEec----------------cccccCC
Confidence 11110 0001110 0124 379999999988764 4579999999999832 2335588
Q ss_pred EEEECCCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCCCCceEEEcCCCCCCCCCCceEEEEEeCCC
Q 009881 329 KLVLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLGGN 408 (523)
Q Consensus 329 ~VI~~p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~p~~~~~~~~~~~v~v~~~s~~ 408 (523)
+||..... ..+ ++.. + ....+..+......++.+-.+ ....+.+|... +.-++.++.+-
T Consensus 254 ~vI~T~P~--d~~---~~~~-------~-g~L~yrsl~~~~~~~~~~~~~--~~~~vn~~d~~------p~tRi~e~k~~ 312 (397)
T 3hdq_A 254 HMIYTGPV--DAF---FDFC-------Y-GKLPYRSLEFRHETHDTEQLL--PTGTVNYPNDY------AYTRVSEFKHI 312 (397)
T ss_dssp EEEECSCH--HHH---TTTT-------T-CCCCEEEEEEEEEEESSSCSC--SSSEEECSSSS------SCSEEEEHHHH
T ss_pred EEEEcCCH--HHH---HHHh-------c-CCCCCceEEEEEEEeccccCC--CCeEEEeCCCC------cceEEEeeccc
Confidence 99864221 111 0100 0 001122222222335544222 35678887432 22367777664
Q ss_pred CCcCCCCcEEEEEEEeecc--------ccchHHHHHHHHHH
Q 009881 409 LAVCPLGMFVLYFSALCDE--------VNQGKKLLHAALSA 441 (523)
Q Consensus 409 ~~~cP~G~~vi~~st~~~~--------~~~~~~~l~~~~~~ 441 (523)
++. +.++.+|..-..+.. ..+..+.++++.+.
T Consensus 313 ~~~-~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~~y~~~ 352 (397)
T 3hdq_A 313 TGQ-RHHQTSVVYEYPRAEGDPYYPVPRPENAELYKKYEAL 352 (397)
T ss_dssp HCC-CCSSEEEEEEEEESSSSCCEECCSHHHHHHHHHHHHH
T ss_pred CCC-CCCCEEEEEEECCCCCccccccCchhHHHHHHHHHHH
Confidence 433 456777755544421 23455666666655
No 25
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.59 E-value=5.9e-16 Score=161.21 Aligned_cols=301 Identities=12% Similarity=0.095 Sum_probs=158.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceecccccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~-G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (523)
.++||||||||++||+||..|+++ |++|+|+|+++++||++++...+.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~------------------------------- 54 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQ------------------------------- 54 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTT-------------------------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccC-------------------------------
Confidence 468999999999999999999999 999999999999999999975410
Q ss_pred ccccCCCceEEecCCCeEEec-ChHHHHHHhcCCcccccccccccceeeeccCCceeecCCCHHHHHh--cccCChHhHH
Q 009881 100 LLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFK--DKSLGLMEKN 176 (523)
Q Consensus 100 ~~~~~~r~f~ldl~GP~ll~~-~~~lv~lL~~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s~~~if~--~~~ls~~~k~ 176 (523)
.++.+|-.|++++.. ...+.+++.+.++.. .+. ...+++ .+|+.+++|.+...+-. ...+.+.
T Consensus 55 ------~g~~~~~~G~~~~~~~~~~~~~~~~~~g~~~--~~~--~~~~~~-~~G~~~~~p~~~~~~~~l~~~~~~~~--- 120 (399)
T 1v0j_A 55 ------TGIEVHKYGAHLFHTSNKRVWDYVRQFTDFT--DYR--HRVFAM-HNGQAYQFPMGLGLVSQFFGKYFTPE--- 120 (399)
T ss_dssp ------TCCEEETTSCCCEEESCHHHHHHHTTTCCBC--CCC--CCEEEE-ETTEEEEESSSHHHHHHHHTSCCCHH---
T ss_pred ------CCEEEEeCCCcEEcCCcHHHHHHHHHhhhhh--ccc--cceEEE-ECCEEEeCCCCHHHHHHHhcccCCHH---
Confidence 123343125766644 346777887777521 221 122333 38899999876432211 1111222
Q ss_pred HHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhH-HHHHH-HHHhccCCCcchhhhhcchHHHHHHH
Q 009881 177 QLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKI-KSIVL-YAIAMADYDQEVSEYVLKTRDGINRL 254 (523)
Q Consensus 177 ~L~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l-~~~l~-~~i~l~~~~~~~~~~~~s~~~~l~~~ 254 (523)
.+.+++...... .....+.++.+|+.+. +.+.+ +.++. +..... ..++ .++++... .++
T Consensus 121 ~~~~~l~~~~~~-------------~~~~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~--~~~~--~~ls~~~~-~~~ 181 (399)
T 1v0j_A 121 QARQLIAEQAAE-------------IDTADAQNLEEKAISL-IGRPLYEAFVKGYTAKQW--QTDP--KELPAANI-TRL 181 (399)
T ss_dssp HHHHHHHHHGGG-------------SCTTC----CCHHHHH-HCHHHHHHHTHHHHHHHH--TSCG--GGSCGGGC-SCC
T ss_pred HHHHHHHHHhhc-------------cCCCCcccHHHHHHHH-HhHHHHHHHHHHHHHhhc--CCCh--hhcChHhh-hcc
Confidence 222222221110 0112356788888863 33333 33332 221221 2222 22444332 000
Q ss_pred HHHHHhhhcccCCCccEE-eecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEE-EcCEEEE
Q 009881 255 ALYNSSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDI-LSHKLVL 332 (523)
Q Consensus 255 ~~~l~s~g~~g~~~~~~~-~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i-~A~~VI~ 332 (523)
.........+.. ..+. +|+||+++|+++|++ ..|++|+||++|++|.. . | +++ .||+||+
T Consensus 182 ~~~~~~~~~~~~--~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~I~~-----~---v-----~~~~~aD~VI~ 243 (399)
T 1v0j_A 182 PVRYTFDNRYFS--DTYEGLPTDGYTAWLQNMAA---DHRIEVRLNTDWFDVRG-----Q---L-----RPGSPAAPVVY 243 (399)
T ss_dssp CCCSSSCCCSCC--CSEEECBTTHHHHHHHHHTC---STTEEEECSCCHHHHHH-----H---H-----TTTSTTCCEEE
T ss_pred eeEeccccchhh--hhhcccccccHHHHHHHHHh---cCCeEEEECCchhhhhh-----h---h-----hhcccCCEEEE
Confidence 000000001111 1243 899999999998765 57899999999999842 1 2 135 6999997
Q ss_pred C-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCCCCceEEEcCCCCCCCCCCceEEEEEeCCC-CC
Q 009881 333 D-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLGGN-LA 410 (523)
Q Consensus 333 ~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~~~~~~~~~p~~~~~~~~~~~v~v~~~s~~-~~ 410 (523)
+ |...+.++. +. ...+..+....+..+.+..+ ....+.+|..... .. .+..+..- ..
T Consensus 244 t~p~~~l~~~~-------------l~-~l~y~s~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~--ri~~~~~~~~~ 302 (399)
T 1v0j_A 244 TGPLDRYFDYA-------------EG-RLGWRTLDFEVEVLPIGDFQ--GTAVMNYNDLDVP---YT--RIHEFRHFHPE 302 (399)
T ss_dssp CSCHHHHTTTT-------------TC-CCCEEEEEEEEEEESSSCSS--SSSEEEECCTTSS---CS--EEEEGGGGCTT
T ss_pred CCcHHHHHhhh-------------hC-CCCcceEEEEEEEEccccCC--CCeEEEeCCCCCC---cc--eeEeecCCCCC
Confidence 5 221111110 10 11122233333445665322 2346677743221 12 34555444 35
Q ss_pred cC-CCCcEEEEEEEe
Q 009881 411 VC-PLGMFVLYFSAL 424 (523)
Q Consensus 411 ~c-P~G~~vi~~st~ 424 (523)
.. |+++.+|++...
T Consensus 303 ~~~~~~~~~v~~e~~ 317 (399)
T 1v0j_A 303 RDYPTDKTVIMREYS 317 (399)
T ss_dssp SCCCSSCEEEEEEEE
T ss_pred CcCCCCCeEEEEeec
Confidence 54 667788777643
No 26
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.59 E-value=5.4e-14 Score=144.55 Aligned_cols=47 Identities=17% Similarity=0.340 Sum_probs=43.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC-CCCCCCcccccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN-PFYGSHFSSLSI 66 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n-~~~GG~~~s~~~ 66 (523)
+..+||+|||||++||+||+.|+++|++|+|+|++ +++||++.++..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~ 89 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHA 89 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecc
Confidence 35689999999999999999999999999999999 999999998764
No 27
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.57 E-value=3.4e-15 Score=153.76 Aligned_cols=226 Identities=13% Similarity=0.178 Sum_probs=128.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceecccccccc
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLL 101 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (523)
++||+|||+|++||++|.+|+++|++|+|+|+++++||++.++..+
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~---------------------------------- 46 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCE---------------------------------- 46 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEET----------------------------------
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccC----------------------------------
Confidence 3799999999999999999999999999999999999999986532
Q ss_pred ccCCCceEEecCCCeEEecCh-HHHHHHhcCCcccccccccccceeeeccCCceeecCCCHHHHHhcccCChHhHHHHHH
Q 009881 102 SQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMR 180 (523)
Q Consensus 102 ~~~~r~f~ldl~GP~ll~~~~-~lv~lL~~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s~~~if~~~~ls~~~k~~L~~ 180 (523)
++.+|..||+++.... .+.+++.+.+.. ..+.. ....+ .+|+.+.+|.+...+..- +.......+.+
T Consensus 47 -----g~~~~~~G~~~~~~~~~~~~~~~~~l~~~--~~~~~--~~~~~-~~g~~~~~p~~~~~~~~l--~~~~~~~~~~~ 114 (367)
T 1i8t_A 47 -----GIQIHKYGAHIFHTNDKYIWDYVNDLVEF--NRFTN--SPLAI-YKDKLFNLPFNMNTFHQM--WGVKDPQEAQN 114 (367)
T ss_dssp -----TEEEETTSCCCEEESCHHHHHHHHTTSCB--CCCCC--CCEEE-ETTEEEESSBSHHHHHHH--HCCCCHHHHHH
T ss_pred -----CceeeccCCceecCCCHHHHHHHHHhhhh--hhccc--cceEE-ECCeEEEcCCCHHHHHHH--hccCCHHHHHH
Confidence 2334312577665443 556666555431 12221 11222 378888888875432211 01111223344
Q ss_pred HHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHH-HHH-HHHhccCCCcchhhhhcchHHHHHHHHHHH
Q 009881 181 FFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (523)
Q Consensus 181 fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~-~l~-~~i~l~~~~~~~~~~~~s~~~~l~~~~~~l 258 (523)
|+...... .....+.++.+|+.+. +.+.+.+ ++. +..... ..++ .++++... .++....
T Consensus 115 ~l~~~~~~-------------~~~~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~--~~~~--~~lsa~~~-~~l~~~~ 175 (367)
T 1i8t_A 115 IINAQKKK-------------YGDKVPENLEEQAISL-VGEDLYQALIKGYTEKQW--GRSA--KELPAFII-KRIPVRF 175 (367)
T ss_dssp HHHHHTTT-------------TCCCCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHH--SSCG--GGSCTTSS-CCCCBCS
T ss_pred HHHHHhhc-------------cCCCCCccHHHHHHHH-HhHHHHHHHHHHHHhhhh--CCCh--HHcCHHHH-hhceeee
Confidence 44432211 0112457899999865 3334333 322 221221 2222 22444321 0000000
Q ss_pred HhhhcccCCCccEE-eecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 259 SSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 259 ~s~g~~g~~~~~~~-~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
..-..+. .+.+. +|+||+++|+++|++ |++|+||++|++|. . + | ++.+|+||++
T Consensus 176 ~~~~~~~--~~~~~~~p~gG~~~l~~~l~~-----g~~i~l~~~V~~i~----~-~---v------~~~~D~VV~a 230 (367)
T 1i8t_A 176 TFDNNYF--SDRYQGIPVGGYTKLIEKMLE-----GVDVKLGIDFLKDK----D-S---L------ASKAHRIIYT 230 (367)
T ss_dssp SSCCCSC--CCSEEECBTTCHHHHHHHHHT-----TSEEECSCCGGGSH----H-H---H------HTTEEEEEEC
T ss_pred ccccccc--cchhhcccCCCHHHHHHHHhc-----CCEEEeCCceeeec----h-h---h------hccCCEEEEe
Confidence 0000111 12343 999999999998865 68999999999873 1 1 2 2458999965
No 28
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.52 E-value=1.2e-14 Score=150.58 Aligned_cols=214 Identities=13% Similarity=0.157 Sum_probs=123.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccccchhhhhccCCCCCCCCCCCccccceeccccccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (523)
.++||+|||+|++|+++|..|+++|++|+|+|+++++||++.+...+.
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~-------------------------------- 49 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSE-------------------------------- 49 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTT--------------------------------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccC--------------------------------
Confidence 458999999999999999999999999999999999999999865421
Q ss_pred cccCCCceEE-ecCCCeEEecC-hHHHHHHhcCCcccccccccccceeeeccCCceeecCCCHHHHHhc--ccCChHhHH
Q 009881 101 LSQHPRNFNL-DVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKD--KSLGLMEKN 176 (523)
Q Consensus 101 ~~~~~r~f~l-dl~GP~ll~~~-~~lv~lL~~~~~~~ylef~~~~~~~~~~~dg~~~~vP~s~~~if~~--~~ls~~~k~ 176 (523)
.++.+ |. |++++... ..+.+++.+.+... .+. ...+++ .+|+.+.+|.+...+-.. ..+++.
T Consensus 50 -----~g~~~~~~-G~~~~~~~~~~~~~~~~~l~~~~--~~~--~~~~~~-~~g~~~~~P~~~~~~~~l~~~~~~~~--- 115 (384)
T 2bi7_A 50 -----TNVMVHVY-GPHIFHTDNETVWNYVNKHAEMM--PYV--NRVKAT-VNGQVFSLPINLHTINQFFSKTCSPD--- 115 (384)
T ss_dssp -----TCCEEETT-SCCCEEESCHHHHHHHHTTSCEE--ECC--CCEEEE-ETTEEEEESCCHHHHHHHTTCCCCHH---
T ss_pred -----CCceEeeC-CceEECCCCHHHHHHHHHHhhhc--ccc--cceEEE-ECCEEEECCCChhHHHHHhcccCCHH---
Confidence 12333 33 57766543 46777777666421 121 122233 378888899875332211 111222
Q ss_pred HHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHH-HHH-HHHhccCCCcchhhhhcchHHHHHHH
Q 009881 177 QLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGINRL 254 (523)
Q Consensus 177 ~L~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~s~~efl~~~~l~~~l~~-~l~-~~i~l~~~~~~~~~~~~s~~~~l~~~ 254 (523)
.+.+++...... . ...+.++.+|+.+. +.+.+.+ ++. +.... +..++ .++++... .++
T Consensus 116 ~~~~~l~~~~~~-------------~-~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~--~~~~~--~~ls~~~~-~r~ 175 (384)
T 2bi7_A 116 EARALIAEKGDS-------------T-IADPQTFEEEALRF-IGKELYEAFFKGYTIKQ--WGMQP--SELPASIL-KRL 175 (384)
T ss_dssp HHHHHHHHHSCC-------------S-CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHH--HSSCG--GGSBGGGC-CSC
T ss_pred HHHHHHHHhhhc-------------c-CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHH--hCCCH--HHhCHHHH-hcc
Confidence 223333321110 0 13467999999865 3444443 322 22222 22222 22444321 000
Q ss_pred HHHHHhhhcccCCCccEE-eecCCcChHHHHHHHHHHHcCcEEEcCCcee-EE
Q 009881 255 ALYNSSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVI-SL 305 (523)
Q Consensus 255 ~~~l~s~g~~g~~~~~~~-~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~-~I 305 (523)
.........+.. +.+. +|+||+++|+++|.+ ..|++|+++++|+ +|
T Consensus 176 ~~~~~~~~~~~~--~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~~i 223 (384)
T 2bi7_A 176 PVRFNYDDNYFN--HKFQGMPKCGYTQMIKSILN---HENIKVDLQREFIVEE 223 (384)
T ss_dssp CCCSSSCCCSCC--CSEEEEETTHHHHHHHHHHC---STTEEEEESCCCCGGG
T ss_pred cccccccccccc--ccccEEECcCHHHHHHHHHh---cCCCEEEECCeeehhh
Confidence 000000001111 2343 999999999998764 4789999999999 77
No 29
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.49 E-value=6.5e-13 Score=148.69 Aligned_cols=99 Identities=13% Similarity=0.050 Sum_probs=68.8
Q ss_pred EEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhh
Q 009881 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQL 349 (523)
Q Consensus 271 ~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l 349 (523)
.....+|++.|.+++.+ |..|+++++|++|..+ +++ +.|++.+|++++||+||+. |...+....+.+.+++
T Consensus 526 ~~~~~~G~~~l~~aLa~-----gl~I~l~t~V~~I~~~--~~~-v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~L 597 (776)
T 4gut_A 526 HTLLTPGYSVIIEKLAE-----GLDIQLKSPVQCIDYS--GDE-VQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPL 597 (776)
T ss_dssp EEECTTCTHHHHHHHHT-----TSCEESSCCEEEEECS--SSS-EEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCC
T ss_pred eEEECChHHHHHHHHHh-----CCcEEcCCeeEEEEEc--CCE-EEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCC
Confidence 55678899999887753 6789999999999875 444 4688889999999999975 4322222112356666
Q ss_pred hhhhhhcccCCCcceEEEEEEEecCCCC
Q 009881 350 QESFQAFSLSDNKGKVARGICITRSSLK 377 (523)
Q Consensus 350 ~~~~~~l~~~~~~~~v~r~i~i~~~~l~ 377 (523)
|..+....+...++.+.+.++.+++++-
T Consensus 598 p~~~~~ai~~l~~g~~~KV~l~f~~~FW 625 (776)
T 4gut_A 598 SEKKMKAINSLGAGIIEKIALQFPYRFW 625 (776)
T ss_dssp CHHHHHHHHHEEEECCEEEEEECSSCTT
T ss_pred CHHHHHHHHhCCCeeEEEEEEecCcccc
Confidence 6654443333335667888888999864
No 30
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.41 E-value=4.1e-12 Score=140.59 Aligned_cols=102 Identities=11% Similarity=-0.029 Sum_probs=70.9
Q ss_pred cEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCC------CcEEEcCEEEEC-CCCCCCCC-
Q 009881 270 ALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------GQDILSHKLVLD-PSFTVPGS- 341 (523)
Q Consensus 270 ~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~------G~~i~A~~VI~~-p~~~~~~l- 341 (523)
.+..+++|++.|+++|++ |..|+||++|++|..+ ++. +.|++.+ |++++||+||+. |...+..+
T Consensus 392 ~~~~~~gG~~~l~~~La~-----~l~I~l~~~V~~I~~~--~~~-v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~ 463 (662)
T 2z3y_A 392 SHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYT--ASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 463 (662)
T ss_dssp CCEEETTCTTHHHHHHTT-----TCEEETTEEEEEEEEE--TTE-EEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred ceeeecCcHHHHHHHHHh-----cCceecCCeEEEEEEC--CCc-EEEEEeecccCCCCeEEEeCEEEECCCHHHHhccc
Confidence 356789999999998865 4589999999999887 333 4566554 568999999975 43332221
Q ss_pred -CcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCC
Q 009881 342 -LASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379 (523)
Q Consensus 342 -~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~ 379 (523)
.+.+.|+||..+....+...++.+.+.++.+++++-+.
T Consensus 464 ~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~ 502 (662)
T 2z3y_A 464 PAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDP 502 (662)
T ss_dssp CSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCT
T ss_pred CceEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccC
Confidence 02356777765544333334777899999999987543
No 31
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.41 E-value=6.2e-12 Score=141.78 Aligned_cols=102 Identities=11% Similarity=-0.029 Sum_probs=70.2
Q ss_pred cEEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCC------CcEEEcCEEEEC-CCCCCCCC-
Q 009881 270 ALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------GQDILSHKLVLD-PSFTVPGS- 341 (523)
Q Consensus 270 ~~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~------G~~i~A~~VI~~-p~~~~~~l- 341 (523)
.++.+++|++.|+++|++ +..|+||++|++|..+ ++. +.|++.+ |++++||+||+. |...+..+
T Consensus 563 ~~~~~~gG~~~L~~aLa~-----~l~I~Lnt~V~~I~~~--~~g-V~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~ 634 (852)
T 2xag_A 563 SHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYT--ASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 634 (852)
T ss_dssp CCEEETTCTTHHHHHHTT-----TCCEECSEEEEEEEEE--TTE-EEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred ceEEecCcHHHHHHHHHh-----CCCEEeCCeEEEEEEc--CCc-EEEEEeecccCCCCeEEECCEEEECCCHHHHHhhh
Confidence 367889999999998865 3479999999999887 443 4566544 568999999975 43332221
Q ss_pred -CcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCC
Q 009881 342 -LASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379 (523)
Q Consensus 342 -~~~~~~~l~~~~~~l~~~~~~~~v~r~i~i~~~~l~~~ 379 (523)
.+.+.|+||..+....+...++.+.+.++.+++++-+.
T Consensus 635 ~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~ 673 (852)
T 2xag_A 635 PAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDP 673 (852)
T ss_dssp CSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCT
T ss_pred cccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCC
Confidence 02356677765544323334677889888899987543
No 32
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.36 E-value=1.8e-12 Score=142.62 Aligned_cols=61 Identities=10% Similarity=-0.017 Sum_probs=47.3
Q ss_pred EEeecCCcChHHHHHHHHHHHcCcEEEcCCcee--EEEEecCCC-----cEEEE-EeCCCc--EEEcCEEEEC
Q 009881 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVI--SLLTDQNSG-----SYKGV-RLASGQ--DILSHKLVLD 333 (523)
Q Consensus 271 ~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~--~I~~~~~~g-----~~~gV-~l~~G~--~i~A~~VI~~ 333 (523)
+.++.||+..|+++|.+.+. .|+.|+|+++|+ +|..+. ++ ..+.| ...+|+ ++.||+||+.
T Consensus 339 ~~~i~GG~~~L~~aLa~~l~-~g~~I~l~~~V~~~~I~~~~-~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvT 409 (721)
T 3ayj_A 339 YTLPVTENVEFIRNLFLKAQ-NVGAGKLVVQVRQERVANAC-HSGTASARAQLLSYDSHNAVHSEAYDFVILA 409 (721)
T ss_dssp ECCSSSSTHHHHHHHHHHHH-HHTTTSEEEEEECEEEEEEE-ECSSSSCCEEEEEEETTCCEEEEEESEEEEC
T ss_pred eeEECCcHHHHHHHHHHhcc-cCCceEeCCEEEeeeEEECC-CCCccccceEEEEEecCCceEEEEcCEEEEC
Confidence 56799999999999987653 278899999999 998763 33 13556 446777 7899999974
No 33
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.35 E-value=2.5e-11 Score=123.15 Aligned_cols=99 Identities=10% Similarity=-0.001 Sum_probs=68.0
Q ss_pred EeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhhh
Q 009881 272 IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQ 350 (523)
Q Consensus 272 ~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~-p~~~~~~l~~~~~~~l~ 350 (523)
+.+.+|+..+.+++++. .|++|+++++|++|..+ +++ +.|++.+|++++||+||+. |......++...++.+|
T Consensus 105 ~~~~~g~~~l~~~l~~~---~g~~i~~~~~V~~i~~~--~~~-~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~ 178 (342)
T 3qj4_A 105 FVAPQGISSIIKHYLKE---SGAEVYFRHRVTQINLR--DDK-WEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLIS 178 (342)
T ss_dssp EECTTCTTHHHHHHHHH---HTCEEESSCCEEEEEEC--SSS-EEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSC
T ss_pred eecCCCHHHHHHHHHHh---cCCEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccC
Confidence 45688999999988764 39999999999999876 444 5688888988999999964 43333344323334454
Q ss_pred hhhhhcccCCCcceEEEEEEEecCCC
Q 009881 351 ESFQAFSLSDNKGKVARGICITRSSL 376 (523)
Q Consensus 351 ~~~~~l~~~~~~~~v~r~i~i~~~~l 376 (523)
+......+...+..+....+.+++++
T Consensus 179 ~~~~~~l~~~~~~~~~~v~l~~~~~~ 204 (342)
T 3qj4_A 179 ECQRQQLEAVSYSSRYALGLFYEAGT 204 (342)
T ss_dssp HHHHHHHHTCCBCCEEEEEEECSSCC
T ss_pred HHHHHHHhcCCccccEEEEEEECCCC
Confidence 43333223344677888888888763
No 34
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.13 E-value=3.9e-10 Score=114.65 Aligned_cols=61 Identities=18% Similarity=0.198 Sum_probs=48.0
Q ss_pred EEeecCCc---ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCC--cEEEcCEEEEC
Q 009881 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASG--QDILSHKLVLD 333 (523)
Q Consensus 271 ~~~p~gG~---~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G--~~i~A~~VI~~ 333 (523)
...|..|. ..+.++|.+.++..|++++++++|++|..+ ++..+.|++.+| ++++||+||+.
T Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~a~~VV~A 204 (369)
T 3dme_A 139 LVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVR--PEGGFELDFGGAEPMTLSCRVLINA 204 (369)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSSEEEEECTTSCEEEEEEEEEEC
T ss_pred eECCCCEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCceEEEEECCCceeEEEeCEEEEC
Confidence 34555552 588999999999999999999999999876 344356888888 47999999853
No 35
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.09 E-value=1.1e-09 Score=114.69 Aligned_cols=61 Identities=21% Similarity=0.202 Sum_probs=51.7
Q ss_pred EEeecC-C---cChHHHHHHHHHHHcCcEEEcCC---ceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 271 LIYPIY-G---QGELPQAFCRRAAVKGCLYVLRM---PVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 271 ~~~p~g-G---~~eL~qal~r~~a~~Gg~~~L~~---~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
++.|.. | ...+.++|.+.++..|++|++++ +|++|..+ ++++++|++.+|++++||+||+.
T Consensus 149 ~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~--~~~v~gV~t~~G~~i~Ad~VV~A 216 (438)
T 3dje_A 149 YFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE--NNDVKGAVTADGKIWRAERTFLC 216 (438)
T ss_dssp EEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE--TTEEEEEEETTTEEEECSEEEEC
T ss_pred EEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec--CCeEEEEEECCCCEEECCEEEEC
Confidence 445665 5 25889999999999999999999 99999887 67888899999989999999953
No 36
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.02 E-value=2.4e-09 Score=118.71 Aligned_cols=60 Identities=18% Similarity=0.201 Sum_probs=50.1
Q ss_pred EEeecCCc---ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 271 ~~~p~gG~---~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
..+|.+|. ..+.+++.+.++..|++++++++|++|..+ +++ ++|++.+|++++||.||+.
T Consensus 406 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~--~~~-v~V~t~~G~~i~Ad~VVlA 468 (676)
T 3ps9_A 406 ITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRK--DDC-WLLNFAGDQQATHSVVVLA 468 (676)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred EEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe--CCe-EEEEECCCCEEECCEEEEC
Confidence 45666664 588999999999999999999999999887 555 5888888889999999953
No 37
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.01 E-value=4.8e-09 Score=107.22 Aligned_cols=59 Identities=17% Similarity=0.129 Sum_probs=48.4
Q ss_pred EEeecCCc---ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 271 ~~~p~gG~---~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
+++|.+|. ..+.++|.+.++..|++++++++|++|..+ +++ ++|++.+| +++||+||+.
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~--~~~-~~V~t~~g-~i~a~~VV~A 204 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRV--DGA-WEVRCDAG-SYRAAVLVNA 204 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEE--TTE-EEEECSSE-EEEESEEEEC
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe--CCe-EEEEeCCC-EEEcCEEEEC
Confidence 45566663 588999999999999999999999999886 454 68887666 8999999964
No 38
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.00 E-value=2.1e-10 Score=109.70 Aligned_cols=44 Identities=27% Similarity=0.344 Sum_probs=41.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccccc
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSI 66 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~~ 66 (523)
+||+|||||++||+||+.|+++|++|+|+||++.+||++.+...
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~ 46 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRS 46 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccccccc
Confidence 79999999999999999999999999999999999999887543
No 39
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.96 E-value=1.3e-08 Score=108.99 Aligned_cols=42 Identities=26% Similarity=0.383 Sum_probs=39.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~ 62 (523)
.++||||||+|++||+||+.|+++|.+|+||||++..||...
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~ 81 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATA 81 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcch
Confidence 469999999999999999999999999999999999998753
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.95 E-value=6e-09 Score=115.79 Aligned_cols=60 Identities=17% Similarity=0.175 Sum_probs=48.8
Q ss_pred EEeecCCc---ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCc-EEEcCEEEEC
Q 009881 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-DILSHKLVLD 333 (523)
Q Consensus 271 ~~~p~gG~---~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~-~i~A~~VI~~ 333 (523)
..+|.+|. ..+.+++.+.++..|++++++++|++|..+ +++ +.|++.+|+ +++||+||+.
T Consensus 401 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~--~~~-v~V~t~~G~~~i~Ad~VVlA 464 (689)
T 3pvc_A 401 IHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRI--DSQ-WQLTFGQSQAAKHHATVILA 464 (689)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEC--SSS-EEEEEC-CCCCEEESEEEEC
T ss_pred EEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEe--CCe-EEEEeCCCcEEEECCEEEEC
Confidence 45666664 588999999999999999999999999886 444 578888887 8999999953
No 41
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.91 E-value=3.8e-08 Score=101.51 Aligned_cols=60 Identities=25% Similarity=0.346 Sum_probs=49.7
Q ss_pred EEeecCCcC---hHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 271 LIYPIYGQG---ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 271 ~~~p~gG~~---eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
.++|..|.- .+.+++.+.++..|++++.+++|++|..+ ++++++|++.+| +++||.||..
T Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~~g-~~~a~~vV~a 225 (405)
T 2gag_B 163 TWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD--GEKVTGVKTTRG-TIHAGKVALA 225 (405)
T ss_dssp EEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTC-CEEEEEEEEC
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe--CCEEEEEEeCCc-eEECCEEEEC
Confidence 456766653 78899999999999999999999999876 667788888777 7999999853
No 42
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.90 E-value=3.7e-08 Score=106.90 Aligned_cols=59 Identities=22% Similarity=0.193 Sum_probs=47.9
Q ss_pred EeecCC---cChHHHHHHHHHHHcCcEEEcCCceeEEEEecCC-CcEEEEEeC--CCc--EEEcCEEEE
Q 009881 272 IYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNS-GSYKGVRLA--SGQ--DILSHKLVL 332 (523)
Q Consensus 272 ~~p~gG---~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~-g~~~gV~l~--~G~--~i~A~~VI~ 332 (523)
.+|..| ..++.++|.+.++..|.+++++++|++|..+ + +++++|++. +|+ +|+||.||+
T Consensus 240 ~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~--~~g~v~Gv~~~~~~g~~~~i~A~~VVl 306 (566)
T 1qo8_A 240 HRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN--DDHSVVGAVVHGKHTGYYMIGAKSVVL 306 (566)
T ss_dssp EECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC--TTSBEEEEEEEETTTEEEEEEEEEEEE
T ss_pred eecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC--CCCcEEEEEEEeCCCcEEEEEcCEEEE
Confidence 345554 3478899999999999999999999999876 5 888888765 676 689999885
No 43
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.88 E-value=7.9e-08 Score=104.40 Aligned_cols=60 Identities=18% Similarity=0.237 Sum_probs=47.6
Q ss_pred EeecCCc---ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeC--CCc--EEEcCEEEE
Q 009881 272 IYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA--SGQ--DILSHKLVL 332 (523)
Q Consensus 272 ~~p~gG~---~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~--~G~--~i~A~~VI~ 332 (523)
.++..|. .++.+.|.+.++..|.+++++++|++|..++ +|++++|++. +|+ +|+||.||+
T Consensus 245 ~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~g~~~~i~a~~VVl 311 (571)
T 1y0p_A 245 HRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD-KGTVKGILVKGMYKGYYWVKADAVIL 311 (571)
T ss_dssp EESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECT-TSCEEEEEEEETTTEEEEEECSEEEE
T ss_pred EecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC-CCeEEEEEEEeCCCcEEEEECCeEEE
Confidence 3455432 4788999999999999999999999998762 3788888765 676 689999885
No 44
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.88 E-value=3.1e-08 Score=101.46 Aligned_cols=60 Identities=25% Similarity=0.244 Sum_probs=48.7
Q ss_pred EEeecCCc---ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 271 ~~~p~gG~---~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
++.|..|. ..+.+++.+.++..|++++.+++|++|..+ ++++++|++.+| +++||+||..
T Consensus 138 ~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~v~gv~~~~g-~i~a~~VV~A 200 (382)
T 1y56_B 138 SWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE--NNEIKGVKTNKG-IIKTGIVVNA 200 (382)
T ss_dssp EEETTCCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTE-EEECSEEEEC
T ss_pred EEcCCCeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEE--CCEEEEEEECCc-EEECCEEEEC
Confidence 44555553 478899999999999999999999999876 667777888777 7999999953
No 45
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.87 E-value=1.5e-08 Score=106.62 Aligned_cols=60 Identities=20% Similarity=0.327 Sum_probs=51.1
Q ss_pred EEeecCC-cChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009881 271 LIYPIYG-QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (523)
Q Consensus 271 ~~~p~gG-~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~ 332 (523)
.++|..+ ...+.++|.+.++..|.+++++++|++|..+ ++++++|++.+|++++||.||+
T Consensus 125 ~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~--~~~v~~V~~~~G~~i~Ad~VVl 185 (447)
T 2i0z_A 125 RMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE--NGQTKAVILQTGEVLETNHVVI 185 (447)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTCCEEECSCEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec--CCcEEEEEECCCCEEECCEEEE
Confidence 3577554 4688999999999999999999999999876 6777899988888899999985
No 46
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.87 E-value=1.3e-08 Score=106.11 Aligned_cols=58 Identities=10% Similarity=0.113 Sum_probs=48.3
Q ss_pred EEeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009881 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (523)
Q Consensus 271 ~~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~ 332 (523)
..+|.....++.+++.+.++..|.+++++++|++|..+ ++. +.|++.+| +++||.||+
T Consensus 124 ~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~--~~~-~~V~~~~g-~i~ad~VIl 181 (417)
T 3v76_A 124 QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERT--ASG-FRVTTSAG-TVDAASLVV 181 (417)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEE--TTE-EEEEETTE-EEEESEEEE
T ss_pred EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEe--CCE-EEEEECCc-EEEeeEEEE
Confidence 35676566799999999999999999999999999876 443 67887777 899999995
No 47
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.72 E-value=3.7e-08 Score=106.02 Aligned_cols=53 Identities=23% Similarity=0.269 Sum_probs=46.2
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
..+.++|.+.++..|++++++++|++|..+ ++++++|++.+|+++.||.||+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~--~~~v~gV~l~~G~~i~Ad~VVlA 272 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME--DGQITGVTLSNGEEIKSRHVVLA 272 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES--SSBEEEEEETTSCEEECSCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe--CCEEEEEEECCCCEEECCEEEEC
Confidence 467778888888899999999999999876 67788899999999999999964
No 48
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.72 E-value=2.1e-07 Score=105.58 Aligned_cols=60 Identities=25% Similarity=0.273 Sum_probs=49.6
Q ss_pred EEeecCCc---ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 271 ~~~p~gG~---~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
+++|..|. ..+.++|.+.+...|++++.+++|++|..+ ++++++|++.+| +++||+||..
T Consensus 140 ~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~--~~~v~~V~t~~G-~i~Ad~VV~A 202 (830)
T 1pj5_A 140 LHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQS--GGRVTGVQTADG-VIPADIVVSC 202 (830)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTE-EEECSEEEEC
T ss_pred EEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEe--CCEEEEEEECCc-EEECCEEEEC
Confidence 45566664 378999999999999999999999999876 677778887766 7999999953
No 49
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.69 E-value=8.6e-09 Score=105.50 Aligned_cols=42 Identities=26% Similarity=0.403 Sum_probs=38.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~ 61 (523)
|++|||||||||++||++|+.|+++|++|+|+||++.+|...
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~ 43 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV 43 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCC
Confidence 567999999999999999999999999999999998887643
No 50
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.61 E-value=9.5e-07 Score=95.87 Aligned_cols=52 Identities=23% Similarity=0.319 Sum_probs=43.9
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCC-CcEEEEEeC--CCc--EEEcCEEEE
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNS-GSYKGVRLA--SGQ--DILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~-g~~~gV~l~--~G~--~i~A~~VI~ 332 (523)
.++.+.|.+.++..|.+++++++|++|..+ + |++++|++. +|+ +|+||.||+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~--~~g~v~GV~~~~~~G~~~~i~A~~VVl 311 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILED--ASGKVTGVLVKGEYTGYYVIKADAVVI 311 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC----CCEEEEEEEETTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEEC--CCCeEEEEEEEeCCCcEEEEEcCEEEE
Confidence 478899999999999999999999999876 5 788888765 675 689999985
No 51
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.52 E-value=5.3e-08 Score=97.97 Aligned_cols=42 Identities=14% Similarity=0.125 Sum_probs=38.4
Q ss_pred cccEEEECCChhHHHHHHHHhh--CCCeEEEeccCCCCCCCccc
Q 009881 22 AFDLIVIGTGLPESVISAAASA--SGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~--~G~~VlvlE~n~~~GG~~~s 63 (523)
++||+|||+|.+||+||++|++ .|++|+|+|+++++||.+..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~ 108 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe
Confidence 5799999999999999999974 69999999999999998754
No 52
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.49 E-value=7.8e-08 Score=96.51 Aligned_cols=43 Identities=28% Similarity=0.366 Sum_probs=40.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccc
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~ 65 (523)
+||||||||++|+++|+.|+++|.+|+|+||++.+||++.+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~ 45 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR 45 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEe
Confidence 6999999999999999999999999999999999999988754
No 53
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.46 E-value=9.1e-08 Score=95.07 Aligned_cols=41 Identities=22% Similarity=0.199 Sum_probs=35.0
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
.|.+|||||||+|.+|++||.+|+|+|++|+++|++. +||.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~ 43 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNR 43 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGG
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCe
Confidence 4778999999999999999999999999999999975 5554
No 54
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.44 E-value=1.2e-07 Score=94.37 Aligned_cols=42 Identities=19% Similarity=0.370 Sum_probs=37.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.+|||||||+|.+|++||..|+|.|++|+++|++ .+||.+..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~ 46 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMAN 46 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeec
Confidence 4699999999999999999999999999999985 67886643
No 55
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.43 E-value=1.2e-07 Score=95.07 Aligned_cols=56 Identities=9% Similarity=0.073 Sum_probs=40.2
Q ss_pred cCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEecc----CCCCCCCcccc
Q 009881 9 ELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDP----NPFYGSHFSSL 64 (523)
Q Consensus 9 ~~~~~~~~~l~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~----n~~~GG~~~s~ 64 (523)
.++.++.++..+..+||||||+|++|+++|..|++.|++|+++|+ +..+||.+...
T Consensus 9 ~~~~~~~~~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~ 68 (338)
T 3itj_A 9 HHSSGLVPRGSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTT 68 (338)
T ss_dssp ------------CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGS
T ss_pred ccccCCCCCCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccc
Confidence 344444455556679999999999999999999999999999999 45899987753
No 56
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.36 E-value=1.6e-07 Score=99.77 Aligned_cols=52 Identities=21% Similarity=0.280 Sum_probs=43.9
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
.++.+.+.+.++..|.+++++++|++|..+ +++ +.|++.+|+++.||.||+.
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~aD~Vi~A 283 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQST--ENC-YNVVLTNGQTICADRVMLA 283 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEC--SSS-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEee--CCE-EEEEECCCcEEEcCEEEEe
Confidence 467888888889999999999999999765 444 4788889999999999964
No 57
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.36 E-value=2.1e-07 Score=95.49 Aligned_cols=42 Identities=26% Similarity=0.403 Sum_probs=38.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~ 61 (523)
|.++||||||||++|+++|+.|+++|++|+|+|+++..|+..
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~ 43 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV 43 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCc
Confidence 456999999999999999999999999999999999887643
No 58
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.34 E-value=3e-07 Score=93.95 Aligned_cols=59 Identities=17% Similarity=0.208 Sum_probs=47.6
Q ss_pred EEeecCCc---ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 271 ~~~p~gG~---~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
+.+|..|. .++.+++.+.++..|++++++++|++|..+ ++++ +|++.+| +++||.||+.
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~-~v~~~~g-~~~a~~vV~A 214 (382)
T 1ryi_A 153 SFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD--GEAL-FIKTPSG-DVWANHVVVA 214 (382)
T ss_dssp EEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECS--SSSE-EEEETTE-EEEEEEEEEC
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE--CCEE-EEEcCCc-eEEcCEEEEC
Confidence 55666664 478899999999999999999999999765 4554 7877666 8999999853
No 59
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.33 E-value=2.8e-07 Score=92.83 Aligned_cols=44 Identities=25% Similarity=0.285 Sum_probs=41.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
|.++||+|||+|++|+++|..|++.|++|+++|+++.+||.|..
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~ 44 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH 44 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC
Confidence 34689999999999999999999999999999999999998764
No 60
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.31 E-value=3.4e-07 Score=94.75 Aligned_cols=46 Identities=17% Similarity=0.052 Sum_probs=34.8
Q ss_pred CCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 14 PYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 14 ~~~~l~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
+.++-.++.+||||||||++||++|+.|++.|++|+|+|+++.++.
T Consensus 15 ~~~~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~ 60 (407)
T 3rp8_A 15 GENLYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP 60 (407)
T ss_dssp --------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--
T ss_pred CCcccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 3444455679999999999999999999999999999999987653
No 61
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.30 E-value=1.8e-05 Score=82.02 Aligned_cols=57 Identities=14% Similarity=0.177 Sum_probs=48.8
Q ss_pred cChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCC
Q 009881 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336 (523)
Q Consensus 278 ~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p~~ 336 (523)
..++.+.+.+.++..|.++++++.|++|..+ ++++.+|++++|+++.||.||+..-.
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGD--GTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEES--SSBEEEEEESSSCEEECSEEEECSCC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 3578888889999999999999999999765 67778899999999999999975433
No 62
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.28 E-value=4.5e-07 Score=90.42 Aligned_cols=42 Identities=29% Similarity=0.397 Sum_probs=37.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.++||+|||+|++|+++|..|++.|++|+++|+ ..+||.+..
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 56 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAE 56 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccc
Confidence 468999999999999999999999999999999 568887654
No 63
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.28 E-value=3e-07 Score=97.85 Aligned_cols=50 Identities=30% Similarity=0.390 Sum_probs=39.6
Q ss_pred CCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcccc
Q 009881 14 PYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSL 64 (523)
Q Consensus 14 ~~~~l~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~ 64 (523)
.|+..+ .++||||||+|.+|++||..|++.|++|+++|+++.+||.|...
T Consensus 18 ~~~~~m-~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~ 67 (491)
T 3urh_A 18 LYFQSM-MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNV 67 (491)
T ss_dssp ---------CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHH
T ss_pred cchhhc-ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccc
Confidence 344444 45999999999999999999999999999999999999976543
No 64
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.28 E-value=5e-07 Score=93.03 Aligned_cols=59 Identities=22% Similarity=0.214 Sum_probs=45.1
Q ss_pred EEeecCCc---ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 271 ~~~p~gG~---~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
++.|.+|. ..+.++|.+.++..|++++++++|++|..+ ++. +.|++.+| +++||+||+.
T Consensus 142 ~~~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~--~~~-v~v~t~~g-~i~a~~VV~A 203 (397)
T 2oln_A 142 FLQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPD--ADG-VSVTTDRG-TYRAGKVVLA 203 (397)
T ss_dssp EEETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE--TTE-EEEEESSC-EEEEEEEEEC
T ss_pred EEcCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEc--CCe-EEEEECCC-EEEcCEEEEc
Confidence 44555553 468889999888999999999999999876 444 45766554 7999998853
No 65
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.27 E-value=3e-07 Score=95.39 Aligned_cols=59 Identities=15% Similarity=0.134 Sum_probs=45.7
Q ss_pred EeecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecC--CCcEEEEEeCCCcEEEcCEEEE
Q 009881 272 IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQN--SGSYKGVRLASGQDILSHKLVL 332 (523)
Q Consensus 272 ~~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~--~g~~~gV~l~~G~~i~A~~VI~ 332 (523)
+||.....++.+++.+.++..|.+++++++|++|..+++ +++ +.|++.+| +++||+||+
T Consensus 102 ~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 102 LFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp EEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred EccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 567554568889999999999999999999999976410 233 57777666 799999985
No 66
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.26 E-value=4.7e-07 Score=89.86 Aligned_cols=36 Identities=14% Similarity=0.162 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
..|||||||+|.+|++||..|+|.|++|+++|++..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 359999999999999999999999999999999764
No 67
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.26 E-value=4.1e-07 Score=91.26 Aligned_cols=44 Identities=20% Similarity=0.344 Sum_probs=40.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
+..+||+|||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 46 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTA 46 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHH
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeec
Confidence 45689999999999999999999999999999999999998753
No 68
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.25 E-value=5.3e-07 Score=97.64 Aligned_cols=60 Identities=27% Similarity=0.351 Sum_probs=48.4
Q ss_pred EEeecCCc--ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCC---C--cEEEcCEEEE
Q 009881 271 LIYPIYGQ--GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS---G--QDILSHKLVL 332 (523)
Q Consensus 271 ~~~p~gG~--~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~---G--~~i~A~~VI~ 332 (523)
+.|+.+-. ..+.+++.+.++..|++++.+++|++|..+ ++++++|++.+ | .+++||.||.
T Consensus 160 ~~~~dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~--~g~v~gV~~~d~~tg~~~~i~A~~VV~ 226 (561)
T 3da1_A 160 GIYVEYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYD--QGKVVGVVAKDRLTDTTHTIYAKKVVN 226 (561)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred EEecCceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc--CCeEEEEEEEEcCCCceEEEECCEEEE
Confidence 55664432 578999999999999999999999999887 77778888753 4 4689999885
No 69
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.24 E-value=3.9e-07 Score=96.35 Aligned_cols=43 Identities=23% Similarity=0.260 Sum_probs=40.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.+|||||||+|.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 3699999999999999999999999999999999999998764
No 70
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.24 E-value=7e-07 Score=87.98 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCCCCCCCc
Q 009881 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~-G~~VlvlE~n~~~GG~~ 61 (523)
.++||||||+|++|+.+|..|++. |.+|+|+|+++.+||..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 468999999999999999999997 99999999999998743
No 71
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.24 E-value=3.7e-05 Score=79.42 Aligned_cols=56 Identities=16% Similarity=0.240 Sum_probs=48.7
Q ss_pred cChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009881 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (523)
Q Consensus 278 ~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p~ 335 (523)
..++.+.+.+.++..|.++++++.|++|..+ ++++.+|++.+|+++.||.||+..-
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~V~~~dG~~i~aD~Vv~a~G 238 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAE--GDRVTGVVLSDGNTLPCDLVVVGVG 238 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCEEECSEEEECCC
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEECcC
Confidence 4578888889999999999999999999876 6777889999999999999997543
No 72
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.24 E-value=4.9e-07 Score=91.84 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=40.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
++..+||||||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 55 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAA 55 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccc
Confidence 445799999999999999999999999999999999999998753
No 73
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.23 E-value=7.2e-07 Score=90.79 Aligned_cols=59 Identities=19% Similarity=0.270 Sum_probs=45.9
Q ss_pred EEeecCCc---ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 271 ~~~p~gG~---~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
++.|..|. ..+.+++.+.+...|++++.+++|++|..+ +++ +.|++.+| +++||+||+.
T Consensus 138 ~~~~~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~-~~v~~~~g-~~~a~~vV~a 199 (372)
T 2uzz_A 138 LFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHD--DDG-VTIETADG-EYQAKKAIVC 199 (372)
T ss_dssp EEESSCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--SSS-EEEEESSC-EEEEEEEEEC
T ss_pred EEeCCCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEc--CCE-EEEEECCC-eEEcCEEEEc
Confidence 44555553 478899999999999999999999999875 444 56777666 4999999853
No 74
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.22 E-value=6e-07 Score=96.93 Aligned_cols=48 Identities=17% Similarity=0.256 Sum_probs=41.3
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccc
Q 009881 18 IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65 (523)
Q Consensus 18 l~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~ 65 (523)
..+.++||||||||++|+.+|..|++.|++|+++|+++.+||.|....
T Consensus 17 ~~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ 64 (549)
T 4ap3_A 17 TGTTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNR 64 (549)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC
T ss_pred CCCCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC
Confidence 344579999999999999999999999999999999999999876433
No 75
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.21 E-value=1.1e-06 Score=89.49 Aligned_cols=40 Identities=18% Similarity=0.133 Sum_probs=35.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
..++||||||+|++|+++|+.|+++|++|+|+|++...+|
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 3578999999999999999999999999999999874443
No 76
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.21 E-value=9e-07 Score=91.77 Aligned_cols=44 Identities=16% Similarity=0.203 Sum_probs=37.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCe-EEEeccCCCCCCCccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKS-VLHLDPNPFYGSHFSS 63 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~-VlvlE~n~~~GG~~~s 63 (523)
+..+||||||||++||++|..|++.|.+ |+|+|+++.+++....
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g 46 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVG 46 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeE
Confidence 4568999999999999999999999999 9999999887654333
No 77
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.20 E-value=1.5e-06 Score=87.04 Aligned_cols=40 Identities=15% Similarity=0.180 Sum_probs=37.3
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCCCCc
Q 009881 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~--G~~VlvlE~n~~~GG~~ 61 (523)
++||+|||+|++|+++|..|++. |++|+++|+++..||..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 46999999999999999999999 99999999999998744
No 78
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.19 E-value=6.6e-07 Score=89.24 Aligned_cols=43 Identities=21% Similarity=0.325 Sum_probs=40.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
..+||||||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~ 48 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA 48 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh
Confidence 3589999999999999999999999999999999999998853
No 79
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.19 E-value=1.2e-06 Score=91.91 Aligned_cols=43 Identities=21% Similarity=0.199 Sum_probs=40.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC--eEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~~~GG~~~s 63 (523)
..+||+|||||++||++|.+|++.|. +|+++|+++.+||.|..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 46899999999999999999999999 99999999999998754
No 80
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.19 E-value=1e-06 Score=91.27 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=41.5
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCc--EEEcCEEEE
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ--DILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~--~i~A~~VI~ 332 (523)
..+.+.|.+.++..|++++.+++|++|..++ ++..+.|++.+|+ +++||.||.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~~~v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFG-TDSVTTIEDINGNKREIEARFIID 160 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEETTSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEEEEEEcCCCCEEEEEcCEEEE
Confidence 3556677777778899999999999998762 4444567778888 699999985
No 81
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.19 E-value=1.3e-06 Score=97.01 Aligned_cols=45 Identities=16% Similarity=0.248 Sum_probs=41.3
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
....+||||||+|.+|+.||..|++.|++|+++|+++++||.+..
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 345689999999999999999999999999999999999998664
No 82
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.18 E-value=1.1e-06 Score=87.28 Aligned_cols=40 Identities=18% Similarity=0.275 Sum_probs=37.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.+||||||+|++|+++|..|++.|++|+++|++ +||.+..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 589999999999999999999999999999999 8998775
No 83
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.18 E-value=1e-06 Score=88.79 Aligned_cols=40 Identities=13% Similarity=0.133 Sum_probs=37.3
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCCCCc
Q 009881 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~--G~~VlvlE~n~~~GG~~ 61 (523)
++||||||+|++||++|+.|++. |++|+++|+++.+||.+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 58999999999999999999997 99999999999998754
No 84
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.18 E-value=1.1e-06 Score=94.84 Aligned_cols=45 Identities=20% Similarity=0.286 Sum_probs=41.3
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.+.++||||||||++|+.+|..|++.|++|+++|+++.+||.|..
T Consensus 13 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~ 57 (542)
T 1w4x_A 13 PPEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYW 57 (542)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 445799999999999999999999999999999999999998753
No 85
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.18 E-value=1.3e-06 Score=89.46 Aligned_cols=51 Identities=18% Similarity=0.220 Sum_probs=41.9
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
..+.+++.+.++..|++++.+++|++|..+ ++. +.|++.+| +++||.||+.
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~-~~v~~~~g-~~~a~~vV~A 200 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDIS--PDS-VKIETANG-SYTADKLIVS 200 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC--SSC-EEEEETTE-EEEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEec--CCe-EEEEeCCC-EEEeCEEEEe
Confidence 588899999999999999999999999875 344 46776555 7999999953
No 86
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.17 E-value=7.5e-07 Score=94.04 Aligned_cols=52 Identities=13% Similarity=0.241 Sum_probs=43.0
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEE-eCCCcEEEcCEEEEC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR-LASGQDILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~-l~~G~~i~A~~VI~~ 333 (523)
.++.+.+.+.++..|.++++++.|++|..+ ++..+.|+ +.+|+ +.||.||+.
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~~g~-i~aD~Vv~a 263 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSAD--ADGRRVATTMKHGE-IVADQVMLA 263 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSCEEEEESSSCE-EEESEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCCEEEEEEcCCCe-EEeCEEEEe
Confidence 477888889999999999999999999765 33335788 88888 999999964
No 87
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.17 E-value=1.4e-06 Score=89.88 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=37.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
+..+||||||||++||++|..|++.|.+|+|+|+++.++++
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~ 64 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR 64 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc
Confidence 45689999999999999999999999999999999877653
No 88
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.16 E-value=1.4e-06 Score=89.35 Aligned_cols=42 Identities=14% Similarity=0.023 Sum_probs=37.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~ 61 (523)
+..+||||||||++|+++|..|++.|++|+|+|+++.+++..
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~ 50 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFG 50 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCC
Confidence 346899999999999999999999999999999999887543
No 89
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.16 E-value=1.6e-06 Score=94.36 Aligned_cols=52 Identities=13% Similarity=0.104 Sum_probs=42.4
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeC-CC--cEEEcCEEEE
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA-SG--QDILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~-~G--~~i~A~~VI~ 332 (523)
..+.+.|.+.++..|++++.++.|++|..+ ++..++|++. +| ++++||.||.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~--~g~~~~V~~~~~G~~~~i~AdlVV~ 182 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS--DPDRVVLTVRRGGESVTVESDFVID 182 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC--STTCEEEEEEETTEEEEEEESEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEEecCCceEEEEcCEEEE
Confidence 467777888888899999999999999875 4556788876 67 5799999984
No 90
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.16 E-value=1.3e-06 Score=93.10 Aligned_cols=51 Identities=20% Similarity=0.100 Sum_probs=42.9
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~A~~VI~ 332 (523)
..+.+++.+.++..|++++.+++|++|..+ + ++++|++ .+|+ +++||.||.
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~--~-~~~~V~~~d~~~G~~~~i~A~~VV~ 204 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRE--N-GLWIVEAEDIDTGKKYSWQARGLVN 204 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEE--T-TEEEEEEEETTTCCEEEEEESCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEe--C-CEEEEEEEECCCCCEEEEECCEEEE
Confidence 478899999999999999999999999876 4 5678876 3676 799999985
No 91
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.16 E-value=1.2e-06 Score=92.78 Aligned_cols=41 Identities=22% Similarity=0.239 Sum_probs=37.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~ 61 (523)
.+|||||||+|.+|++||..|++.|++|+++|+++..||.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 46999999999999999999999999999999998666554
No 92
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.15 E-value=1.2e-06 Score=90.66 Aligned_cols=40 Identities=25% Similarity=0.391 Sum_probs=36.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSH 60 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~--G~~VlvlE~n~~~GG~ 60 (523)
.++||||||+|++|+++|+.|+++ |++|+|||+++..+|.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~ 76 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEE 76 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTT
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcc
Confidence 459999999999999999999999 9999999998765554
No 93
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.14 E-value=1.8e-06 Score=91.07 Aligned_cols=45 Identities=20% Similarity=0.176 Sum_probs=40.9
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009881 18 IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (523)
Q Consensus 18 l~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~ 62 (523)
...+.+||+|||+|.+|+++|..|++.|++|+++|+++++||.+.
T Consensus 118 ~~~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 118 SRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp CSSCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 334678999999999999999999999999999999999999754
No 94
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.13 E-value=2e-06 Score=88.72 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=35.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~ 57 (523)
+..+||+|||||++||++|..|++.|++|+|+|+++..
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 45689999999999999999999999999999999874
No 95
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.12 E-value=1.3e-06 Score=86.39 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEE-eccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLH-LDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~Vlv-lE~n~~~GG~~~s 63 (523)
..+||+|||+|.+|+++|..|++.|++|++ +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 468999999999999999999999999999 999 788998754
No 96
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.12 E-value=1.9e-06 Score=92.48 Aligned_cols=45 Identities=33% Similarity=0.468 Sum_probs=41.1
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.+.++||||||+|.+|+++|..|++.|++|+++|+++++||.|..
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 84 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPH 84 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccc
Confidence 345799999999999999999999999999999999989998753
No 97
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.12 E-value=1.5e-06 Score=86.81 Aligned_cols=42 Identities=19% Similarity=0.320 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
..+||+|||+|++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 48 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW 48 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc
Confidence 4689999999999999999999999999999999 78987754
No 98
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.12 E-value=1.7e-06 Score=82.57 Aligned_cols=35 Identities=17% Similarity=0.316 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.++||||||+|++|+.+|..|++.|.+|+++|++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 46899999999999999999999999999999984
No 99
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.12 E-value=1.3e-06 Score=91.49 Aligned_cols=62 Identities=18% Similarity=0.289 Sum_probs=47.8
Q ss_pred EEeecCCc---ChHHHHHHHHHHHcCcEEEcCCceeEEEEec-------------CCCcEEEEEeCCCcEE--EcCEEEE
Q 009881 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQ-------------NSGSYKGVRLASGQDI--LSHKLVL 332 (523)
Q Consensus 271 ~~~p~gG~---~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~-------------~~g~~~gV~l~~G~~i--~A~~VI~ 332 (523)
++++..|. .++.++|.+.++..|++++.+++|++|..+. +++++++|++.+| ++ +||.||+
T Consensus 170 ~~~~~~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~ 248 (448)
T 3axb_A 170 VLIRSAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVV 248 (448)
T ss_dssp EEESSEEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEE
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEE
Confidence 44455443 3889999999999999999999999998720 1556678888777 68 9999985
Q ss_pred C
Q 009881 333 D 333 (523)
Q Consensus 333 ~ 333 (523)
.
T Consensus 249 A 249 (448)
T 3axb_A 249 A 249 (448)
T ss_dssp C
T ss_pred C
Confidence 3
No 100
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.12 E-value=1.1e-06 Score=89.14 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=39.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCCCCCcccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSSL 64 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~~~GG~~~s~ 64 (523)
|.++||+|||+|++|+++|..|++.|+ +|+++|+++ +||.+..+
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~ 46 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHW 46 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTS
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccC
Confidence 346899999999999999999999999 999999999 99876543
No 101
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.11 E-value=9.9e-07 Score=93.48 Aligned_cols=44 Identities=18% Similarity=0.278 Sum_probs=39.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.+.++||||||+|.+|++||..|++.|++|+++|++ .+||.|..
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~ 60 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVN 60 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccc
Confidence 345799999999999999999999999999999976 78988754
No 102
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=1.8e-06 Score=91.12 Aligned_cols=44 Identities=18% Similarity=0.229 Sum_probs=40.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
..++||||||+|.+|+++|..|++.|++|+++|+++.+||.|..
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLN 47 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccC
Confidence 34699999999999999999999999999999999999998754
No 103
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.08 E-value=1.9e-06 Score=91.59 Aligned_cols=45 Identities=29% Similarity=0.312 Sum_probs=40.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEecc--------CCCCCCCcccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDP--------NPFYGSHFSSL 64 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~--------n~~~GG~~~s~ 64 (523)
..+|||||||+|.+|++||..|++.|++|+++|+ +..+||.|...
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~ 56 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNV 56 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeeccc
Confidence 3569999999999999999999999999999998 66899977543
No 104
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.08 E-value=2.1e-06 Score=92.05 Aligned_cols=44 Identities=30% Similarity=0.372 Sum_probs=39.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC--------CCCCCcccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP--------FYGSHFSSL 64 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~--------~~GG~~~s~ 64 (523)
.+|||||||+|.+|+.||..|++.|++|+++|+++ .+||.|...
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~ 82 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNV 82 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCc
Confidence 46999999999999999999999999999999975 789977543
No 105
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.08 E-value=2.1e-06 Score=92.58 Aligned_cols=46 Identities=22% Similarity=0.298 Sum_probs=41.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s~~ 65 (523)
+.++||||||||++|+.+|..|++.|++|+++|+++.+||.|....
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~ 52 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNR 52 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC
Confidence 4568999999999999999999999999999999999999876433
No 106
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.07 E-value=2e-06 Score=86.37 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=38.9
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
++..+||+|||+|++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 54 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMT 54 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceec
Confidence 445799999999999999999999999999999975 78887643
No 107
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.07 E-value=1.6e-06 Score=91.54 Aligned_cols=42 Identities=24% Similarity=0.323 Sum_probs=39.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
++||||||+|.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 43 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLN 43 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCC
Confidence 489999999999999999999999999999999999998754
No 108
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.07 E-value=1.1e-06 Score=93.05 Aligned_cols=43 Identities=19% Similarity=0.270 Sum_probs=40.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.++||||||+|.+|+++|..|++.|++|+++|+++.+||.|..
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 46 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLN 46 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccce
Confidence 4689999999999999999999999999999999999997654
No 109
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.07 E-value=1.5e-06 Score=91.93 Aligned_cols=44 Identities=25% Similarity=0.335 Sum_probs=40.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
+.++||||||+|.+|+++|..|++.|++|+++|+++.+||.|..
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLN 47 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccc
Confidence 34699999999999999999999999999999999999998754
No 110
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.06 E-value=2.7e-06 Score=93.13 Aligned_cols=42 Identities=14% Similarity=0.237 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~ 62 (523)
..+||||||+|++|+++|..|++.|++|+++|+.+..||.+.
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~ 86 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKI 86 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSST
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCccc
Confidence 469999999999999999999999999999999999998553
No 111
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.06 E-value=1.9e-06 Score=93.84 Aligned_cols=53 Identities=15% Similarity=0.207 Sum_probs=43.8
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~A~~VI~ 332 (523)
.++.++|.+.+...|.++++++.|++|..++ ++++++|.. .+|+ +++|+.||+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~-~g~v~Gv~~~~~~~g~~~~i~A~~VVl 200 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQ-DGAVVGCTALCIETGEVVYFKARATVL 200 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECT-TSCEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECC-CCEEEEEEEEEcCCCeEEEEEcCEEEE
Confidence 5888999999988999999999999998752 577888875 4676 589999885
No 112
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.06 E-value=1.8e-06 Score=90.94 Aligned_cols=42 Identities=26% Similarity=0.333 Sum_probs=39.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
+|||||||+|.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 42 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLR 42 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccce
Confidence 489999999999999999999999999999999999998754
No 113
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.05 E-value=1.5e-06 Score=92.42 Aligned_cols=40 Identities=25% Similarity=0.385 Sum_probs=37.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~ 62 (523)
+|||||||+|.+|++||..|++.|++|+++|++. +||.|.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~ 47 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCA 47 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCccc
Confidence 5999999999999999999999999999999974 999764
No 114
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.05 E-value=2.7e-06 Score=90.99 Aligned_cols=52 Identities=23% Similarity=0.226 Sum_probs=41.7
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEe--CCCc--EEEcCEEEE
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL--ASGQ--DILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l--~~G~--~i~A~~VI~ 332 (523)
..+.+.|.+.++..|++++.+++|++|..+ ++++.+|++ .+|+ +++||.||.
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~--~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFE--GERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE--TTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEE--CCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 367777888888899999999999999887 677666655 4574 799999984
No 115
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.05 E-value=2e-06 Score=92.64 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=41.4
Q ss_pred CCcccEEEECCChhHHHHHHHHh-hCCCeEEEeccCCCCCCCccccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAAS-ASGKSVLHLDPNPFYGSHFSSLS 65 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La-~~G~~VlvlE~n~~~GG~~~s~~ 65 (523)
+.++||||||||++|+.+|..|+ +.|++|+++|+++.+||.|....
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ 52 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNR 52 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccC
Confidence 34689999999999999999999 99999999999999999876443
No 116
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.04 E-value=2.7e-06 Score=87.66 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=41.4
Q ss_pred ChHHHHHHHHHHHc-CcEEEcCCceeEEEEecCCCcEE-EEEeCCCcEEEcCEEEE
Q 009881 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYK-GVRLASGQDILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~-Gg~~~L~~~V~~I~~~~~~g~~~-gV~l~~G~~i~A~~VI~ 332 (523)
..+.+.|.+.+... |.+++++++|++|..+ +++++ .|++.+|++++||.||.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~--~~~v~g~v~~~~g~~~~ad~vV~ 160 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRD--ERHAIDQVRLNDGRVLRPRVVVG 160 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEEC--TTSCEEEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEc--CCceEEEEEECCCCEEECCEEEE
Confidence 46667777777777 8999999999999876 44433 67888999999999985
No 117
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.04 E-value=3.9e-06 Score=90.14 Aligned_cols=40 Identities=23% Similarity=0.346 Sum_probs=36.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
..++||||||||++||++|+.|++.|.+|+|+||++..+.
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~ 42 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSP 42 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCC
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 3569999999999999999999999999999999987653
No 118
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.04 E-value=1.5e-06 Score=92.12 Aligned_cols=43 Identities=21% Similarity=0.287 Sum_probs=39.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.++||||||+|.+|+++|..|++.|++|+++|+++.+||.+..
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 47 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLN 47 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceee
Confidence 4699999999999999999999999999999999999987643
No 119
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.03 E-value=3.1e-06 Score=91.32 Aligned_cols=43 Identities=12% Similarity=0.098 Sum_probs=38.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.++||||||||++||++|+.|++.|.+|+|+||++..++..+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~ 67 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRV 67 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCce
Confidence 4689999999999999999999999999999999987654433
No 120
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.03 E-value=2.6e-06 Score=91.69 Aligned_cols=41 Identities=17% Similarity=0.317 Sum_probs=35.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~ 61 (523)
+.++||||||+|++||+||+.|++ |.+|+||||++..||..
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s 46 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGST 46 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC---
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCCh
Confidence 456899999999999999999999 99999999999877653
No 121
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.03 E-value=2.7e-06 Score=92.49 Aligned_cols=40 Identities=15% Similarity=0.257 Sum_probs=37.4
Q ss_pred cccEEEECCChhHHHHHHHHhhC------CCeEEEeccCCCCCCCc
Q 009881 22 AFDLIVIGTGLPESVISAAASAS------GKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~------G~~VlvlE~n~~~GG~~ 61 (523)
++||||||||++||++|+.|++. |.+|+||||++.+|+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 80 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHT 80 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCcc
Confidence 48999999999999999999999 99999999999988763
No 122
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.03 E-value=1.7e-06 Score=90.91 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeC---CCc--EEEcCEEEE
Q 009881 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVL 332 (523)
Q Consensus 280 eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~---~G~--~i~A~~VI~ 332 (523)
.+.+.|.+.++..|.++++++.|+++..+ ++++++|++. +|+ +++||.||.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~G~~~~~~ad~VV~ 156 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFE--DGYVKGAVLFNRRTNEELTVYSKVVVE 156 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEE--CCEEEEEEEEEcCCCceEEEEcCEEEE
Confidence 56677777777889999999999999876 6677667664 676 799999994
No 123
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.03 E-value=3.5e-06 Score=91.39 Aligned_cols=60 Identities=18% Similarity=0.304 Sum_probs=46.9
Q ss_pred EEeecCCc--ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeC---CCc--EEEcCEEEE
Q 009881 271 LIYPIYGQ--GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVL 332 (523)
Q Consensus 271 ~~~p~gG~--~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~---~G~--~i~A~~VI~ 332 (523)
+.|+.+.. ..+..++.+.++..|++++.+++|++|..+ ++++++|++. +|+ +|+||.||.
T Consensus 178 ~~~~dg~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~--~~~v~gV~~~d~~tg~~~~i~A~~VV~ 244 (571)
T 2rgh_A 178 GVYLDFRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYE--GDQIVGVKARDLLTDEVIEIKAKLVIN 244 (571)
T ss_dssp EEECCEECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEBSCEEE
T ss_pred EEecCCeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEe--CCEEEEEEEEEcCCCCEEEEEcCEEEE
Confidence 45665333 468888889999999999999999999887 6677788753 344 699999985
No 124
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.03 E-value=3.8e-06 Score=89.48 Aligned_cols=41 Identities=17% Similarity=0.202 Sum_probs=37.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
...+||+|||||++|+++|..|++.|++|+|+|+++.+|+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~ 130 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH 130 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC
Confidence 45689999999999999999999999999999999988754
No 125
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.02 E-value=2.3e-06 Score=94.14 Aligned_cols=52 Identities=15% Similarity=0.221 Sum_probs=44.1
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~A~~VI~ 332 (523)
..|.++|.+.+...|.+++.++.|.+|..+ +|+++||.. .+|+ .++|+.||+
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 214 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ--DGKCYGAVVRDLVTGDIIAYVAKGTLI 214 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec--CCEEEEEEEEECCCCcEEEEEcCEEEE
Confidence 378899999988899999999999999886 788888765 4676 489999985
No 126
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.02 E-value=2.1e-06 Score=85.87 Aligned_cols=44 Identities=14% Similarity=0.213 Sum_probs=39.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEecc----CCCCCCCccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDP----NPFYGSHFSS 63 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~----n~~~GG~~~s 63 (523)
+..+||+|||+|++|+++|..|++.|++|+++|+ ....||.+..
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 53 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT 53 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee
Confidence 4568999999999999999999999999999999 6778887654
No 127
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.02 E-value=4.1e-06 Score=89.36 Aligned_cols=40 Identities=18% Similarity=0.227 Sum_probs=36.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
+.++||||||+|++||++|+.|++.|.+|+|+||++..+.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 48 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG 48 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 4578999999999999999999999999999999987754
No 128
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.02 E-value=3.2e-06 Score=89.64 Aligned_cols=53 Identities=8% Similarity=0.154 Sum_probs=40.9
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCc-----EEEcCEEEEC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-----DILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~-----~i~A~~VI~~ 333 (523)
.++.+.+.+..+..|.++++++.|++|..++ ++. +.|++.+|+ ++.+|.||+.
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~-~~v~~~~~~~~~~~~~~~D~vi~a 284 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQD-DGK-LLVKYKNVETGEESEDVYDTVLWA 284 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECT-TSC-EEEEEEETTTCCEEEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCc-EEEEEecCCCCceeEEEcCEEEEC
Confidence 4678888888899999999999999997652 333 356665554 7899999964
No 129
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.01 E-value=4.2e-06 Score=90.67 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=33.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~G 58 (523)
.++||||||+|++||++|+.|+++|.+|+|||+++..+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 46899999999999999999999999999999998765
No 130
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.01 E-value=2.1e-06 Score=90.57 Aligned_cols=42 Identities=26% Similarity=0.491 Sum_probs=38.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.++||||||+|++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~ 43 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLN 43 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccc
Confidence 4689999999999999999999999999999998 78887643
No 131
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.01 E-value=4e-06 Score=83.00 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=36.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCCCCCccc
Q 009881 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~~~GG~~~s 63 (523)
+||+|||+|++|+++|..|++.|+ +|+++|++ .+||.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~ 42 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITG 42 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccc
Confidence 799999999999999999999999 99999995 68887654
No 132
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.00 E-value=4.5e-06 Score=91.82 Aligned_cols=53 Identities=13% Similarity=0.128 Sum_probs=41.8
Q ss_pred ChHHHHHHHHHHHc--CcEEEcCCceeEEEEecCC--CcEEEEEe---CCCc--EEEcCEEEE
Q 009881 279 GELPQAFCRRAAVK--GCLYVLRMPVISLLTDQNS--GSYKGVRL---ASGQ--DILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~--Gg~~~L~~~V~~I~~~~~~--g~~~gV~l---~~G~--~i~A~~VI~ 332 (523)
.++.++|.+.+... |.+++.++.|.+|.+++ + |+++||.. .+|+ .|+|+.||+
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~-~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVL 227 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDK-NTPNRIAGAVGFNLRANEVHIFKANAMVV 227 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECS-SSTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeC-CccceEEEEEEEEcCCCcEEEEEeCEEEE
Confidence 47778888888777 99999999999998872 3 38888864 3565 589999985
No 133
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.00 E-value=3.1e-06 Score=89.37 Aligned_cols=42 Identities=19% Similarity=0.271 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.++||||||+|.+|+++|..|++.|++|+++|++ .+||.|..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~ 44 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVN 44 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccC
Confidence 4689999999999999999999999999999998 78997753
No 134
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.98 E-value=2.7e-06 Score=84.47 Aligned_cols=42 Identities=12% Similarity=0.187 Sum_probs=37.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~ 62 (523)
|..+||+|||+|++|+++|..|++.|++|+++|++ .+||.+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 44 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLT 44 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEe
Confidence 35689999999999999999999999999999974 7888654
No 135
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.98 E-value=3e-06 Score=89.42 Aligned_cols=51 Identities=14% Similarity=0.102 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCc-EEEcCEEEEC
Q 009881 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-DILSHKLVLD 333 (523)
Q Consensus 280 eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~-~i~A~~VI~~ 333 (523)
++.+.+.+.++..|.++++++.|++|..+ ++. +.|++.+|+ ++.+|.||+.
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~G~~~i~~D~vv~a 259 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERD--AQG-TTLVAQDGTRLEGFDSVIWA 259 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEE--TTE-EEEEETTCCEEEEESEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCe-EEEEEeCCcEEEEcCEEEEC
Confidence 67788888888999999999999999765 333 578888999 8999999964
No 136
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.98 E-value=2.8e-06 Score=90.13 Aligned_cols=54 Identities=4% Similarity=-0.031 Sum_probs=43.1
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCC-cEEEcCEEEEC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASG-QDILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G-~~i~A~~VI~~ 333 (523)
.++.+.+.+..+..|.++++++.|++|..++ +++.+.|++.+| +++.||.||+.
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~~v~~~~G~~~i~~D~vv~a 280 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNV-ETDKLKIHMNDSKSIDDVDELIWT 280 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEETTSCEEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcC-CCcEEEEEECCCcEEEEcCEEEEC
Confidence 3677888888889999999999999997642 332457888889 78999999964
No 137
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.98 E-value=2.7e-06 Score=85.99 Aligned_cols=37 Identities=11% Similarity=0.020 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCC------CeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASG------KSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G------~~VlvlE~n~~~GG 59 (523)
.||||||+|++||++|+.|+++| ++|+|||++...+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 49999999999999999999998 99999999885444
No 138
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.96 E-value=3.1e-06 Score=88.96 Aligned_cols=52 Identities=8% Similarity=0.091 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 280 eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
++.+.+.+.++..|.++++++.|++|..+ ++..+.|++.+|+++.||.||+.
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~i~~D~vv~a 260 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKN--TDGSLTLELEDGRSETVDCLIWA 260 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEEC--TTSCEEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCcEEEEEECCCcEEEcCEEEEC
Confidence 67888888888999999999999999764 32224678889999999999964
No 139
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.96 E-value=3.9e-06 Score=86.17 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=33.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
++||||||||++||++|+.|++.|.+|+|+|+++.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 47999999999999999999999999999999864
No 140
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.96 E-value=5.7e-06 Score=88.20 Aligned_cols=39 Identities=21% Similarity=0.343 Sum_probs=36.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
.++||+|||+|++||++|+.|++.|.+|+|+|+++..+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 49 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTG 49 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 468999999999999999999999999999999987654
No 141
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.96 E-value=3.9e-06 Score=91.73 Aligned_cols=52 Identities=19% Similarity=0.320 Sum_probs=44.1
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~A~~VI~ 332 (523)
.+|.++|.+.+...|.+++.++.|.+|..+ +|++.||.. .+|+ .|+|+.||+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 211 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME--NGECRGVIALCIEDGTIHRFRAKNTVI 211 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE--CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 478899999888899999999999999887 788888875 4676 689999885
No 142
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.94 E-value=4.2e-06 Score=89.00 Aligned_cols=53 Identities=13% Similarity=0.139 Sum_probs=43.6
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
.++.+.+.+.++..|.++++++.|++|..+ ++..+.|++.+|+++.||.||+.
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a 283 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKN--ADGTRHVVFESGAEADYDVVMLA 283 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEEC--TTSCEEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEECCCcEEEcCEEEEc
Confidence 367888888889999999999999999765 32235788889989999999964
No 143
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.94 E-value=6.1e-06 Score=84.68 Aligned_cols=35 Identities=17% Similarity=0.284 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~ 57 (523)
.+|+|||||++||++|..|+++|++|+|+||++.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 47999999999999999999999999999997643
No 144
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.93 E-value=5.4e-06 Score=81.12 Aligned_cols=38 Identities=21% Similarity=0.314 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
+||+|||+|++|+.+|..|++.|++|+++|+++..|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~ 40 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRF 40 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGG
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccccc
Confidence 89999999999999999999999999999998765543
No 145
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.93 E-value=3.6e-06 Score=88.85 Aligned_cols=42 Identities=31% Similarity=0.405 Sum_probs=38.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.++||||||+|.+|+.||..|++.|++|+++|+++ +||.|..
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~ 46 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLN 46 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCC
Confidence 46999999999999999999999999999999998 8987643
No 146
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.93 E-value=5.9e-06 Score=87.21 Aligned_cols=42 Identities=12% Similarity=0.279 Sum_probs=39.5
Q ss_pred ccEEEECCChhHHHHHHHHhh---CCCe---EEEeccCCCCCCCcccc
Q 009881 23 FDLIVIGTGLPESVISAAASA---SGKS---VLHLDPNPFYGSHFSSL 64 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~---~G~~---VlvlE~n~~~GG~~~s~ 64 (523)
+||+|||||.+|++||..|++ .|.+ |+++|+++.+||.|...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~ 50 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYT 50 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecC
Confidence 699999999999999999999 9999 99999999999988753
No 147
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.91 E-value=6.1e-06 Score=89.73 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=35.5
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC-CCCC
Q 009881 18 IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYGS 59 (523)
Q Consensus 18 l~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~-~~GG 59 (523)
....+|||||||||++|+.||++|++.|.+|+++|++. .+|+
T Consensus 17 ~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 17 RGSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred cccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 34457999999999999999999999999999999985 4554
No 148
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.91 E-value=4.4e-06 Score=87.87 Aligned_cols=41 Identities=20% Similarity=0.258 Sum_probs=37.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
++||||||+|.+|++||..|++.|++|+++|++ .+||.|..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~ 43 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLN 43 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcC
Confidence 589999999999999999999999999999998 88987643
No 149
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.90 E-value=4e-06 Score=89.26 Aligned_cols=53 Identities=9% Similarity=0.156 Sum_probs=43.7
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
.++.+.+.+.++..|.++++++.|++|..+ +++.+.|++.+|+++.||.||+.
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a 287 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLN--TDGSKHVTFESGKTLDVDVVMMA 287 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEC--TTSCEEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCceEEEEECCCcEEEcCEEEEC
Confidence 367888888889999999999999999765 33335788889999999999964
No 150
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.90 E-value=6.6e-06 Score=84.33 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFY 57 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~--G~~VlvlE~n~~~ 57 (523)
.||||||||++||++|+.|+++ |.+|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999999876
No 151
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.90 E-value=1.5e-05 Score=87.66 Aligned_cols=39 Identities=13% Similarity=0.178 Sum_probs=36.0
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEeccCCCCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYGS 59 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~-~G~~VlvlE~n~~~GG 59 (523)
.++||||||||++||++|+.|++ .|.+|+|+||++..+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~ 70 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPME 70 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 46999999999999999999999 9999999999987653
No 152
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.89 E-value=1.1e-05 Score=89.28 Aligned_cols=42 Identities=26% Similarity=0.411 Sum_probs=39.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~ 62 (523)
..+||||||+|.+|+.||..|++.|++|+++|+++++||.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 468999999999999999999999999999999999999864
No 153
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.89 E-value=4.2e-06 Score=88.15 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=38.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.++||||||+|.+|+.||..|++.|++|+++|+ +.+||.|..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~ 45 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLN 45 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCC
Confidence 358999999999999999999999999999999 789998764
No 154
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.88 E-value=9.9e-06 Score=87.10 Aligned_cols=52 Identities=13% Similarity=0.178 Sum_probs=43.9
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~ 332 (523)
..+.+.|.+.+...|++++.+ .|++|..++ ++.+++|++.+|++++||.||.
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~-~g~~~~v~~~~g~~i~ad~vV~ 216 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNN-RGYISNLLTKEGRTLEADLFID 216 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEETTSCEECCSEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcC-CCcEEEEEECCCcEEEeCEEEE
Confidence 578888888888899999999 899998752 5566788888898999999994
No 155
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.88 E-value=7.9e-06 Score=80.78 Aligned_cols=39 Identities=15% Similarity=0.382 Sum_probs=35.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~ 62 (523)
++||+|||+|++|+++|..|++.|++|+++|+ ++||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 48999999999999999999999999999986 5788775
No 156
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.88 E-value=7.8e-06 Score=88.94 Aligned_cols=50 Identities=16% Similarity=0.159 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHH-cCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009881 280 ELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (523)
Q Consensus 280 eL~qal~r~~a~-~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~ 332 (523)
.+.+++.+.++. .|.++ ++..|+.|..+ ++++++|.+.+|++++||.||+
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e--~g~V~GV~t~dG~~I~Ad~VVL 175 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVE--NDRVVGAVTQMGLKFRAKAVVL 175 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEES--SSBEEEEEETTSEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEec--CCEEEEEEECCCCEEECCEEEE
Confidence 566777777776 57777 68899999876 6778899888898899999885
No 157
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.87 E-value=6e-06 Score=88.73 Aligned_cols=52 Identities=8% Similarity=-0.004 Sum_probs=44.2
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
.++++.+.+..+..|..+++++.|+++... +++ +.|.+.+++++.+|.|++.
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~--~~~-~~v~~~~~~~~~~D~vLvA 314 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKM--DDK-ILVEFSDKTSELYDTVLYA 314 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEec--CCe-EEEEEcCCCeEEEEEEEEc
Confidence 588999999999999999999999999876 444 4677889999999999853
No 158
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.87 E-value=4.4e-06 Score=88.99 Aligned_cols=51 Identities=10% Similarity=0.121 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 280 eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
++.+.+.+.++..|.+++++++|++|..+ +++ +.|++.+|+++.||.||+.
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~aD~Vv~a 274 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRT--GAG-VLVTMTDGRTVEGSHALMT 274 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC--SSS-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCE-EEEEECCCcEEEcCEEEEC
Confidence 67888888889999999999999999765 444 4677788999999999953
No 159
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.87 E-value=1.2e-05 Score=81.84 Aligned_cols=40 Identities=20% Similarity=0.121 Sum_probs=36.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~ 62 (523)
+||||||+|++|+.||.+|++.|++|+++|++...+...+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h 41 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAH 41 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccc
Confidence 6999999999999999999999999999999986665544
No 160
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.86 E-value=1.2e-05 Score=89.59 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=40.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
...+||+|||+|.+|+.||..|++.|++|+++|+++++||.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 35689999999999999999999999999999999999998764
No 161
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.86 E-value=6.7e-06 Score=87.66 Aligned_cols=54 Identities=7% Similarity=0.003 Sum_probs=43.7
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcE-EEcCEEEECC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD-ILSHKLVLDP 334 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~-i~A~~VI~~p 334 (523)
.++.+.+.+..+..|.++++++.|++|..++ ++. +.|++.+|++ +.||.||+..
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~~v~~~~g~~~~~~D~vi~a~ 271 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVS-DKN-LSIHLSDGRIYEHFDHVIYCV 271 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS-TTC-EEEEETTSCEEEEESEEEECC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcC-Cce-EEEEECCCcEEEECCEEEECC
Confidence 4778888888899999999999999997541 233 5677889988 9999999653
No 162
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.86 E-value=8.7e-06 Score=88.27 Aligned_cols=52 Identities=12% Similarity=0.185 Sum_probs=42.1
Q ss_pred ChHHHHHHHHHHH-cCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~-~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
..+.++|.+.++. .|.++ ++..|+.|..+ ++++++|.+.+|++++|+.||+.
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e--~g~V~GV~t~dG~~i~AdaVVLA 175 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIVK--NNQVVGVRTNLGVEYKTKAVVVT 175 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEES--SSBEEEEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEec--CCEEEEEEECCCcEEEeCEEEEc
Confidence 3567777777776 47777 68899999876 67888999999999999999853
No 163
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.85 E-value=7.5e-06 Score=85.52 Aligned_cols=34 Identities=9% Similarity=0.045 Sum_probs=32.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.+||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3799999999999999999999999999999986
No 164
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.84 E-value=1e-05 Score=87.16 Aligned_cols=38 Identities=29% Similarity=0.434 Sum_probs=34.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~ 57 (523)
..+||+||||+|.+|+++|.+|+++|++|++||+....
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 35699999999999999999999999999999998753
No 165
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.84 E-value=8.7e-06 Score=87.09 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhh-CCCeEEEeccCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPF 56 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~-~G~~VlvlE~n~~ 56 (523)
+||+||||+|.+|+++|.+|++ .|++|||||+...
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 6999999999999999999998 6899999999644
No 166
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.84 E-value=1.1e-05 Score=85.22 Aligned_cols=51 Identities=22% Similarity=0.160 Sum_probs=41.1
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeC-CCcEEEcCEEEE
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA-SGQDILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~-~G~~i~A~~VI~ 332 (523)
.++.++|.+.++..|.+++.++.| +|..+ ++++.+|.+. ++.++.||.||+
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~--~~~v~Gv~v~~~~g~~~a~~VVl 170 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK--DGKVTGFVTEKRGLVEDVDKLVL 170 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE--TTEEEEEEETTTEEECCCSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe--CCEEEEEEEEeCCCeEEeeeEEE
Confidence 478888988888889999999999 99877 6778787653 334578999885
No 167
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.84 E-value=5.8e-06 Score=90.16 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=43.1
Q ss_pred ChHHHHHHHHHHHcC-cEEEcCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 009881 279 GELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~G-g~~~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~A~~VI~ 332 (523)
.+|.++|.+.+...| .+++.++.|.+|..+ ++++++|.. .+|+ +++|+.||+
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 191 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD--DGHVRGLVAMNMMEGTLVQIRANAVVM 191 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 478888988888888 899999999999887 677777753 5676 689999885
No 168
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.83 E-value=8.5e-06 Score=86.71 Aligned_cols=42 Identities=14% Similarity=0.191 Sum_probs=39.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
..+||||||+|++|+++|..|++. ++|+++|+++++||.+..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~ 148 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL 148 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec
Confidence 468999999999999999999999 999999999999998764
No 169
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.82 E-value=1.1e-05 Score=87.22 Aligned_cols=37 Identities=16% Similarity=0.353 Sum_probs=33.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPF 56 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G-~~VlvlE~n~~ 56 (523)
..+||+||||+|.+|+++|.+|++.| .+|+|||+...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999998 69999999765
No 170
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.81 E-value=1.4e-05 Score=72.59 Aligned_cols=33 Identities=30% Similarity=0.412 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
+||+|||+|++|+.+|..|++.|++|+++|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999999999999987
No 171
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.79 E-value=1.1e-05 Score=84.69 Aligned_cols=41 Identities=29% Similarity=0.310 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-----CeEEEeccCCCCCCCc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASG-----KSVLHLDPNPFYGSHF 61 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G-----~~VlvlE~n~~~GG~~ 61 (523)
..+||||||+|++|+++|..|++.| .+|+++|+++.+|.+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~ 74 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG 74 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC
Confidence 4689999999999999999999999 9999999999998544
No 172
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.74 E-value=2.2e-05 Score=84.72 Aligned_cols=52 Identities=25% Similarity=0.205 Sum_probs=44.4
Q ss_pred ChHHHHHHHHHHHc-CcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009881 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~-Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~ 332 (523)
..+.+.|.+.++.. |++++++ .|++|..++ ++.+++|++.+|++++||.||.
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~-~g~~~~v~~~~G~~i~ad~vI~ 246 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDA-NGNIESVRTATGRVFDADLFVD 246 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECT-TSCEEEEEETTSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcC-CCCEEEEEECCCCEEECCEEEE
Confidence 47888898988888 9999999 999998752 5667789888998999999994
No 173
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.73 E-value=2.1e-05 Score=86.50 Aligned_cols=52 Identities=15% Similarity=0.161 Sum_probs=41.0
Q ss_pred ChHHHHHHHHHHHc-Cc-EEEcCCceeEEEEecCCC---cEEEEEe---CCCc--EEEcCEEEE
Q 009881 279 GELPQAFCRRAAVK-GC-LYVLRMPVISLLTDQNSG---SYKGVRL---ASGQ--DILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~-Gg-~~~L~~~V~~I~~~~~~g---~~~gV~l---~~G~--~i~A~~VI~ 332 (523)
..+...+.+.+... |. +++.++.|.+|..+ ++ +++||.. .+|+ +|+|+.||+
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~--~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVl 212 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKD--NNDPNAVAGAVGFSVREPKFYVFKAKAVIL 212 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEEC--TTCTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEc--CCccceeEEEEEEEecCCcEEEEEcCEEEE
Confidence 35677777777777 99 89999999999886 45 8888764 4666 589999985
No 174
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.73 E-value=1.3e-05 Score=86.23 Aligned_cols=38 Identities=21% Similarity=0.383 Sum_probs=34.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
.+||+||||+|.+|+++|.+|++ |++|+|||+....++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~~ 62 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPTA 62 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcCC
Confidence 46999999999999999999999 999999999876543
No 175
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.72 E-value=1.7e-05 Score=85.12 Aligned_cols=52 Identities=12% Similarity=0.193 Sum_probs=42.7
Q ss_pred ChHHHHHHHHHHH-cCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009881 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~-~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~ 332 (523)
..+.+.|.+.++. .|++++.+ .|++|..+. ++.+++|++.+|++++||.||.
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~-~g~~~~v~~~~g~~i~ad~vV~ 227 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQ-HGDIEKLITKQNGEISGQLFID 227 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECT-TSCEEEEEESSSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecC-CCcEEEEEECCCCEEEcCEEEE
Confidence 4678888888888 89999999 599998752 5666788888888899999994
No 176
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.71 E-value=2.3e-05 Score=83.98 Aligned_cols=41 Identities=15% Similarity=0.356 Sum_probs=37.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~ 62 (523)
+..+||+|||||.+|++||.+|++.|++|+++|+ ++||.+.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 3469999999999999999999999999999996 5788775
No 177
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.71 E-value=1.9e-05 Score=90.69 Aligned_cols=42 Identities=29% Similarity=0.377 Sum_probs=40.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~ 62 (523)
..+||||||+|.+|+.||..|++.|++|+++|+++++||.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 368999999999999999999999999999999999999887
No 178
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.70 E-value=2.1e-05 Score=85.46 Aligned_cols=50 Identities=24% Similarity=0.195 Sum_probs=41.7
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
.++.+.+.+.++..|.++++++.|++|..+ ++ +|++.+|+++.||.||+.
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~---~v~~~~g~~i~~D~Vi~a 277 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN--GA---VVRLKSGSVIQTDMLILA 277 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG--GT---EEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC--CC---EEEECCCCEEEcCEEEEc
Confidence 477888888889999999999999999643 23 477789999999999964
No 179
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.68 E-value=1.7e-05 Score=83.51 Aligned_cols=42 Identities=14% Similarity=0.143 Sum_probs=38.9
Q ss_pred CcccEEEECCChhHHHHHHHHhh-C------CCeEEEeccCCCCCCCcc
Q 009881 21 TAFDLIVIGTGLPESVISAAASA-S------GKSVLHLDPNPFYGSHFS 62 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~-~------G~~VlvlE~n~~~GG~~~ 62 (523)
..+||+|||+|.+|+.+|..|++ . |.+|+++|+++++||.++
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 45899999999999999999999 7 999999999999999774
No 180
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.68 E-value=2.2e-05 Score=83.15 Aligned_cols=52 Identities=8% Similarity=0.077 Sum_probs=41.2
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p 334 (523)
.++.+.+.+.++..|.++++++.|++|.. ++++..|.+ +++++.||.||+..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~~~v~~v~~-~~~~i~~D~vi~a~ 278 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKG---NERVEAVET-DKGTYKADLVLVSV 278 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE---SSBEEEEEE-TTEEEECSEEEECS
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEc---CCcEEEEEE-CCCEEEcCEEEECc
Confidence 47778888888999999999999999964 345556765 45689999999643
No 181
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.67 E-value=2.7e-05 Score=84.37 Aligned_cols=39 Identities=23% Similarity=0.359 Sum_probs=35.0
Q ss_pred CCCCCcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCC
Q 009881 17 PIEPTAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNP 55 (523)
Q Consensus 17 ~l~~~~~DVIIIGaGl~GL~aA~~La~~-G~~VlvlE~n~ 55 (523)
.+...+||+||||+|.+|+++|.+|++. |.+|+|||+..
T Consensus 14 ~~~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 14 DVSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp GTTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred hcCCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 3556789999999999999999999975 89999999976
No 182
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.66 E-value=1.7e-05 Score=84.53 Aligned_cols=52 Identities=21% Similarity=0.230 Sum_probs=44.2
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~ 332 (523)
..+.+.|.+.+...|++++.+ .|++|..++ ++.+++|++.+|++++||.||.
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~-~~~~~~v~~~~g~~~~ad~vV~ 224 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDE-RGWISGVHTKQHGEISGDLFVD 224 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEESSSCEEECSEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcC-CCCEEEEEECCCCEEEcCEEEE
Confidence 478888888888899999999 999998752 5667789888898999999994
No 183
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.64 E-value=2.3e-05 Score=86.39 Aligned_cols=44 Identities=16% Similarity=0.234 Sum_probs=37.4
Q ss_pred CcccEEEECCChhHHHHHHHHhh-----CCCeEEEeccCCCC--CCCcccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASA-----SGKSVLHLDPNPFY--GSHFSSL 64 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~-----~G~~VlvlE~n~~~--GG~~~s~ 64 (523)
.++||+|||||++||++|+.|++ .|.+|+|+||++.. .|+...+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l 57 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGL 57 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEE
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEE
Confidence 46899999999999999999999 99999999998764 3444433
No 184
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.64 E-value=3.1e-05 Score=81.22 Aligned_cols=41 Identities=10% Similarity=0.119 Sum_probs=35.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCCCCc
Q 009881 21 TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~--G~~VlvlE~n~~~GG~~ 61 (523)
+.+||||||+|.+|+++|..|++. |++|+++|++++.|+..
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~ 44 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP 44 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC
Confidence 457999999999999999999998 88999999999887643
No 185
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.62 E-value=3.3e-05 Score=89.32 Aligned_cols=41 Identities=10% Similarity=0.200 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCCCCCc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHF 61 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~~~GG~~ 61 (523)
+.+||+|||+|.+|++||..|++.|+ +|+++|+++++||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 57899999999999999999999999 799999999999975
No 186
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.62 E-value=2.7e-05 Score=82.21 Aligned_cols=54 Identities=11% Similarity=0.132 Sum_probs=44.9
Q ss_pred cChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009881 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (523)
Q Consensus 278 ~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p 334 (523)
..++.+.+.+.++..|.+++++++|++|..+ ++++ .|++.+|+++.||.||+..
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~~~g~~i~aD~Vv~a~ 254 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE--NGKV-ARVITDKRTLDADLVILAA 254 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBE-EEEEESSCEEECSEEEECS
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc--CCeE-EEEEeCCCEEEcCEEEECC
Confidence 3578888889999999999999999999764 5554 4777899999999999653
No 187
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.61 E-value=2.9e-05 Score=81.85 Aligned_cols=42 Identities=10% Similarity=-0.034 Sum_probs=38.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC--CeEEEeccCCCCCCCcc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHFS 62 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G--~~VlvlE~n~~~GG~~~ 62 (523)
..+||+|||+|++|+.+|..|++.| ++|+++|+++++||.++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 3579999999999999999999999 99999999999998764
No 188
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.61 E-value=2.9e-05 Score=84.54 Aligned_cols=35 Identities=31% Similarity=0.334 Sum_probs=32.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n 54 (523)
...+||||||+|.+|++||..|++.|++|+++|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45699999999999999999999999999999983
No 189
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.59 E-value=4.1e-05 Score=81.64 Aligned_cols=39 Identities=23% Similarity=0.335 Sum_probs=35.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~G 58 (523)
+.+||+||||+|.+|+++|.+|++.|++|+++|+..+.+
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 457999999999999999999999999999999998765
No 190
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.53 E-value=4.3e-05 Score=82.52 Aligned_cols=38 Identities=29% Similarity=0.426 Sum_probs=34.8
Q ss_pred cccEEEECCChhHHHHHHHHhh-CCCeEEEeccCCCCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYGS 59 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~-~G~~VlvlE~n~~~GG 59 (523)
+||+||||+|.+|+++|.+|++ .|++|+|||+....++
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~ 40 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDEN 40 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTT
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccC
Confidence 5999999999999999999999 7999999999877643
No 191
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.52 E-value=5e-05 Score=79.67 Aligned_cols=52 Identities=6% Similarity=0.117 Sum_probs=42.7
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p 334 (523)
.++.+.+.+.++..|.+++++++|++|..+ ++++ .|++.+| ++.||.||+..
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~~~g-~i~aD~Vv~A~ 240 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEET--ANGI-VLETSEQ-EISCDSGIFAL 240 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEEC--SSCE-EEEESSC-EEEESEEEECS
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEcc--CCeE-EEEECCC-EEEeCEEEECc
Confidence 578888888889999999999999999764 5555 7877666 89999999643
No 192
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.50 E-value=5.1e-05 Score=79.03 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=36.3
Q ss_pred ccEEEECCChhHHHHHHHHhh--CCCeEEEeccCCCCCCCc
Q 009881 23 FDLIVIGTGLPESVISAAASA--SGKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~--~G~~VlvlE~n~~~GG~~ 61 (523)
.||||||||++|+++|..|++ .|++|+|+|++++.|+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~ 43 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP 43 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC
Confidence 599999999999999999999 899999999999988754
No 193
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.49 E-value=6.1e-05 Score=78.98 Aligned_cols=53 Identities=19% Similarity=0.183 Sum_probs=43.9
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p 334 (523)
.++.+.+.+.++..|.+++++++|++|..+ ++++..|.+ +|+++.||.||+..
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~~v~~-~g~~i~~D~vv~a~ 243 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEEV--DDEIITKTL-DGKEIKSDIAILCI 243 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEEE--TTEEEEEET-TSCEEEESEEEECC
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEcC--CCeEEEEEe-CCCEEECCEEEECc
Confidence 578888889899999999999999999764 566656764 88899999999643
No 194
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.44 E-value=0.00011 Score=78.47 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=35.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~ 57 (523)
..+||+||||+|.+|+++|.+|++.|++|++||+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 35799999999999999999999999999999998754
No 195
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.44 E-value=8.3e-05 Score=80.77 Aligned_cols=38 Identities=21% Similarity=0.366 Sum_probs=35.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhh-CCCeEEEeccCCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFY 57 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~-~G~~VlvlE~n~~~ 57 (523)
+.+||+||||+|.+|+++|.+|++ .|++|++||+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 467999999999999999999999 89999999998654
No 196
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.44 E-value=9.7e-05 Score=79.54 Aligned_cols=39 Identities=28% Similarity=0.398 Sum_probs=35.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCCCCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGS 59 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~-G~~VlvlE~n~~~GG 59 (523)
..||+||||+|.+|+++|.+|+++ |++|+|||+.....+
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~ 51 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRG 51 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCC
Confidence 579999999999999999999998 999999999877643
No 197
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.43 E-value=0.00011 Score=76.54 Aligned_cols=57 Identities=7% Similarity=0.014 Sum_probs=46.2
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p~ 335 (523)
.++.+.+.+.++..|.++++++.|++|..+.+++++.+|++.+|+++.||.||+...
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G 247 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIG 247 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCC
Confidence 467888888889999999999999999751015666788889999999999997543
No 198
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.40 E-value=5.8e-05 Score=77.97 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=41.4
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p~~ 336 (523)
.++.+.+.+..+..|.++++++.|++|. .+ +|++++|+++.||.||+.+..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~----~~---~v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIR----EH---EIVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEC----SS---EEEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEEC----CC---eEEECCCCEEeeeEEEECCCC
Confidence 3677888888899999999999999983 22 367789999999999965443
No 199
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.39 E-value=9.1e-05 Score=77.56 Aligned_cols=52 Identities=10% Similarity=0.026 Sum_probs=40.9
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p 334 (523)
.++.+.+.+.++..|.++++++.|++|.. +++++.|.+ +|+++.||.||+..
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~v~~v~~-~~~~i~~d~vi~a~ 242 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEG---DGRVQKVVT-DKNAYDADLVVVAV 242 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEEC---SSBCCEEEE-SSCEEECSEEEECS
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEc---cCcEEEEEE-CCCEEECCEEEECc
Confidence 46788888888899999999999999964 344445665 67789999999643
No 200
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.38 E-value=0.00011 Score=78.17 Aligned_cols=52 Identities=17% Similarity=0.165 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009881 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (523)
Q Consensus 280 eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p 334 (523)
++.+.+.+..+..|.++++++.|++|..+ +++ +.|++++|+++.||.||+..
T Consensus 227 ~~~~~~~~~l~~~GV~v~~~~~V~~i~~~--~~~-~~v~l~dG~~i~aD~Vv~a~ 278 (493)
T 1m6i_A 227 YLSNWTMEKVRREGVKVMPNAIVQSVGVS--SGK-LLIKLKDGRKVETDHIVAAV 278 (493)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCEEEEEEE--TTE-EEEEETTSCEEEESEEEECC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEec--CCe-EEEEECCCCEEECCEEEECC
Confidence 57788888888999999999999999765 444 47888999999999999653
No 201
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.37 E-value=0.00014 Score=77.11 Aligned_cols=52 Identities=10% Similarity=0.141 Sum_probs=41.6
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p 334 (523)
.++.+.+.+..+..|.++++++.|++|.. ++++..|.+ +|+++.||.||+..
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~v~~v~~-~g~~i~~D~Vi~a~ 287 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG---NGKVEKIIT-DKNEYDVDMVILAV 287 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC---SSSCCEEEE-SSCEEECSEEEECC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc---CCcEEEEEE-CCcEEECCEEEECC
Confidence 46778888888899999999999999963 344445665 78899999999654
No 202
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.35 E-value=0.00013 Score=74.78 Aligned_cols=53 Identities=17% Similarity=0.078 Sum_probs=44.1
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p 334 (523)
.++.+.+.+.++..|.++++++.|++|..+ ++. +.|++.+|+++.||.||+..
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~g~~i~~d~vv~a~ 239 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKA--GEG-LEAHLSDGEVIPCDLVVSAV 239 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEECS
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEec--CCE-EEEEECCCCEEECCEEEECc
Confidence 367888888888999999999999999765 333 57888899999999999753
No 203
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.34 E-value=0.00013 Score=75.50 Aligned_cols=50 Identities=22% Similarity=0.241 Sum_probs=41.6
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p~ 335 (523)
.++.+.+.+..+..|.++++++.|++|. + + +|++.+|+++.||.||+...
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~----~v~~~~g~~i~~D~vi~a~G 236 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV-D--G----VVLLDDGTRIAADMVVVGIG 236 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T----EEEETTSCEEECSEEEECSC
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C----EEEECCCCEEEcCEEEECcC
Confidence 3677888888899999999999999996 3 3 56778999999999997543
No 204
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.29 E-value=0.00016 Score=73.64 Aligned_cols=46 Identities=20% Similarity=0.186 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 280 eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
++.+.+.+..+..|.++++++.|++|. .+ +|++.+|+ +.+|.||+.
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~----~~---~v~~~~g~-i~~D~vi~a 229 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEAN----EE---GVLTNSGF-IEGKVKICA 229 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEEC----SS---EEEETTEE-EECSCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEE----ee---EEEECCCE-EEcCEEEEC
Confidence 677888888889999999999999984 12 46678888 999999864
No 205
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.23 E-value=0.00016 Score=75.46 Aligned_cols=36 Identities=17% Similarity=0.382 Sum_probs=33.8
Q ss_pred cccEEEECCChhHHHHHHHHhh---CCCeEEEeccCCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPFY 57 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~---~G~~VlvlE~n~~~ 57 (523)
..||||||||++|+.+|..|++ .|.+|+++|+++++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 4699999999999999999999 89999999999965
No 206
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.17 E-value=0.00027 Score=73.09 Aligned_cols=53 Identities=11% Similarity=0.131 Sum_probs=44.2
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~p 334 (523)
.++.+.+.+..+..|.++++++.|++|..+ ++..+|++++|+++.||.||+..
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~---~~~~~v~~~dg~~i~aD~Vv~a~ 237 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE---GQLEQVMASDGRSFVADSALICV 237 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS---SSCCEEEETTSCEEECSEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc---CcEEEEEECCCCEEEcCEEEEee
Confidence 467788888888999999999999999643 35568889999999999999754
No 207
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.17 E-value=0.00022 Score=76.80 Aligned_cols=36 Identities=11% Similarity=0.202 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~--G~~VlvlE~n~~~G 58 (523)
.||+|||||++|++||..|++. |.+|+++|+++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 4899999999999999999998 89999999999986
No 208
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.17 E-value=0.00011 Score=78.22 Aligned_cols=44 Identities=16% Similarity=0.135 Sum_probs=32.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
...+||||||+|.+||++|++|.++|...+++|+.+..|+.+..
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~ 80 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKIC 80 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEE
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCccee
Confidence 34599999999999999999999987776666666666665543
No 209
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.95 E-value=0.00049 Score=73.23 Aligned_cols=36 Identities=11% Similarity=0.277 Sum_probs=33.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
.+..|||||+|.+|+.+|..|++.|++|+++|++++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 356799999999999999999999999999999986
No 210
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.88 E-value=0.00054 Score=70.32 Aligned_cols=38 Identities=18% Similarity=0.293 Sum_probs=32.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEeccCCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSH 60 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~~~GG~ 60 (523)
..|||||+|.+|+++|.+|++.|+ +|+++|++++++.+
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~ 42 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC 42 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc
Confidence 369999999999999999998874 89999999875444
No 211
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.82 E-value=0.00091 Score=68.58 Aligned_cols=39 Identities=10% Similarity=0.243 Sum_probs=35.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
+...|||||+|++|+.||..|++.|.+|+++|++++++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y 46 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY 46 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc
Confidence 346899999999999999999888999999999998773
No 212
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.68 E-value=0.00097 Score=69.57 Aligned_cols=48 Identities=10% Similarity=0.137 Sum_probs=39.9
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
.++.+.+.+..+..|.++++++.|+++. .+ .|.+++|+++.||.||+.
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~----~~---~v~~~~g~~~~~D~vl~a 235 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAIN----GN---EITFKSGKVEHYDMIIEG 235 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEE----TT---EEEETTSCEEECSEEEEC
T ss_pred chhHHHHHHHhhccceEEEeccEEEEec----CC---eeeecCCeEEeeeeEEEE
Confidence 5777888888899999999999999873 22 366789999999999853
No 213
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.56 E-value=0.0012 Score=68.64 Aligned_cols=34 Identities=15% Similarity=0.313 Sum_probs=31.2
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CeEEEeccCCCC
Q 009881 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNPFY 57 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G--~~VlvlE~n~~~ 57 (523)
.|||||+|.+|+++|..|++.| .+|+++|++++.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~ 39 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC
Confidence 6999999999999999999876 789999999863
No 214
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.42 E-value=0.015 Score=60.45 Aligned_cols=39 Identities=23% Similarity=0.175 Sum_probs=35.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
..+|+|||+|..|+-+|..|++.|.+|+++|+++++..+
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 187 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV 187 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc
Confidence 468999999999999999999999999999999987663
No 215
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.41 E-value=0.015 Score=51.15 Aligned_cols=34 Identities=35% Similarity=0.488 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
...|+|||+|.-|+.+|..|.+.|++|+++|++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4579999999999999999999999999999874
No 216
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.33 E-value=0.016 Score=49.40 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|+|||+|..|...|..|++.|++|.++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 217
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.27 E-value=0.014 Score=59.75 Aligned_cols=38 Identities=16% Similarity=0.026 Sum_probs=35.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 184 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER 184 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 47999999999999999999999999999999988665
No 218
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.91 E-value=0.021 Score=56.01 Aligned_cols=37 Identities=16% Similarity=0.053 Sum_probs=33.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~ 182 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRA 182 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCc
Confidence 3799999999999999999999999999999987643
No 219
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.90 E-value=0.028 Score=49.09 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
...++|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4579999999999999999999999999999973
No 220
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.83 E-value=0.028 Score=58.62 Aligned_cols=56 Identities=14% Similarity=0.181 Sum_probs=42.5
Q ss_pred CCCCCCCccCCCCCCC----CCCC-CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 1 MTGNESESELPVPPYP----PIEP-TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 1 ~~~~~~~~~~~~~~~~----~l~~-~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
|+++-...+|-+|+-. +..+ .-..|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 28 ~~a~~~~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 28 MEAHSLAGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp HHTTCCTTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred HhHHHhhccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 3455566678888322 2222 224699999999999999999999999999999875
No 221
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.68 E-value=0.04 Score=47.42 Aligned_cols=33 Identities=15% Similarity=0.244 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
-.|+|||.|--|..+|..|.+.|++|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 479999999999999999999999999999974
No 222
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.66 E-value=0.03 Score=48.09 Aligned_cols=33 Identities=30% Similarity=0.488 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|+|+|+|--|..+|..|++.|++|.++|++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999999999999863
No 223
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.61 E-value=0.024 Score=59.14 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999998865
No 224
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.58 E-value=0.032 Score=56.72 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=35.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~ 61 (523)
-+++|||+|..|+-+|..|++.|.+|+++|+++++....
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~ 184 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL 184 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc
Confidence 579999999999999999999999999999999876643
No 225
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=94.47 E-value=0.033 Score=58.27 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-+|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 5799999999999999999999999999999988754
No 226
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.43 E-value=0.032 Score=58.09 Aligned_cols=37 Identities=27% Similarity=0.198 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 207 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 5899999999999999999999999999999988754
No 227
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=94.40 E-value=0.037 Score=58.02 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=35.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++...
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 221 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc
Confidence 57999999999999999999999999999999988763
No 228
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=94.36 E-value=0.034 Score=57.94 Aligned_cols=37 Identities=22% Similarity=0.161 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~ 204 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc
Confidence 5799999999999999999999999999999988654
No 229
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.35 E-value=0.032 Score=56.45 Aligned_cols=37 Identities=16% Similarity=0.259 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
..|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 4799999999999999999999999999999998765
No 230
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.35 E-value=0.038 Score=49.78 Aligned_cols=37 Identities=19% Similarity=0.281 Sum_probs=32.6
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCC
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNP 55 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~-G~~VlvlE~n~ 55 (523)
+...-.|+|||.|..|..+|..|.+. |++|+++|++.
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 33445799999999999999999999 99999999874
No 231
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.03 E-value=0.052 Score=44.49 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-CeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G-~~VlvlE~n~ 55 (523)
..|+|+|+|..|..+|..|.+.| ++|.+++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 47999999999999999999999 9999999863
No 232
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=93.97 E-value=0.05 Score=55.83 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=35.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..+
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 183 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR 183 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 57999999999999999999999999999999987654
No 233
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=93.95 E-value=0.045 Score=53.41 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~ 57 (523)
..|+|||+|..|+-+|..|++.|.+|+++|+.+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 57999999999999999999999999999987653
No 234
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=93.88 E-value=0.048 Score=56.74 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 204 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP 204 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh
Confidence 4799999999999999999999999999999988654
No 235
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=93.69 E-value=1.1 Score=43.79 Aligned_cols=92 Identities=10% Similarity=0.043 Sum_probs=56.5
Q ss_pred eecCCcChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEE-cCEEEE-CCCCCCCCCCcccchhhh
Q 009881 273 YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDIL-SHKLVL-DPSFTVPGSLASSHQQLQ 350 (523)
Q Consensus 273 ~p~gG~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~-A~~VI~-~p~~~~~~l~~~~~~~l~ 350 (523)
....|+..|.+++.+ |.+++++++|++|..+ ++. +.|++.+|+.+. ||.||+ +|......+. ...+.++
T Consensus 104 ~~~~~~~~l~~~l~~-----g~~i~~~~~v~~i~~~--~~~-~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~-~~~~~l~ 174 (336)
T 1yvv_A 104 VGKPGMSAITRAMRG-----DMPVSFSCRITEVFRG--EEH-WNLLDAEGQNHGPFSHVIIATPAPQASTLL-AAAPKLA 174 (336)
T ss_dssp EESSCTHHHHHHHHT-----TCCEECSCCEEEEEEC--SSC-EEEEETTSCEEEEESEEEECSCHHHHGGGG-TTCHHHH
T ss_pred EcCccHHHHHHHHHc-----cCcEEecCEEEEEEEe--CCE-EEEEeCCCcCccccCEEEEcCCHHHHHHhh-ccCHHHH
Confidence 456788888876654 7899999999999876 333 568888888764 899985 3433222221 2223333
Q ss_pred hhhhhcccCCCcceEEEEEEEecCCCC
Q 009881 351 ESFQAFSLSDNKGKVARGICITRSSLK 377 (523)
Q Consensus 351 ~~~~~l~~~~~~~~v~r~i~i~~~~l~ 377 (523)
.. + ....+..+..+.+.+++++.
T Consensus 175 ~~---~-~~~~~~~~~~~~~~~~~~~~ 197 (336)
T 1yvv_A 175 SV---V-AGVKMDPTWAVALAFETPLQ 197 (336)
T ss_dssp HH---H-TTCCEEEEEEEEEEESSCCS
T ss_pred HH---H-hhcCccceeEEEEEecCCCC
Confidence 22 2 12224455555566777754
No 236
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.60 E-value=0.055 Score=53.64 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
-.|.|||+|.-|...|..++++|++|+++|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 237
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=93.47 E-value=0.062 Score=56.12 Aligned_cols=37 Identities=14% Similarity=0.068 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~ 203 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc
Confidence 4799999999999999999999999999999988653
No 238
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=93.42 E-value=0.044 Score=57.56 Aligned_cols=38 Identities=24% Similarity=0.320 Sum_probs=35.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
..+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 223 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT 223 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh
Confidence 35799999999999999999999999999999988765
No 239
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.33 E-value=0.08 Score=51.44 Aligned_cols=33 Identities=30% Similarity=0.365 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|+++|++|.++|++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 469999999999999999999999999999875
No 240
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=93.20 E-value=0.078 Score=55.45 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 4799999999999999999999999999999998765
No 241
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.20 E-value=0.068 Score=45.46 Aligned_cols=33 Identities=30% Similarity=0.316 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|+|+|+|-.|..+|..|.+.|++|.++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 359999999999999999999999999999863
No 242
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=93.19 E-value=0.082 Score=54.65 Aligned_cols=38 Identities=26% Similarity=0.214 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~ 187 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER 187 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 47999999999999999999999999999999887554
No 243
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=93.12 E-value=0.074 Score=55.99 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++-.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 231 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA 231 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh
Confidence 5799999999999999999999999999999988754
No 244
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.11 E-value=0.14 Score=51.51 Aligned_cols=48 Identities=17% Similarity=0.200 Sum_probs=37.1
Q ss_pred CCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 12 VPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 12 ~~~~~~l~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
..|-++-.+.++||||||+|++|+++|+.|+++|++|+|+|+++..||
T Consensus 7 ~~~~~~~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g 54 (382)
T 1ryi_A 7 HMARIRAMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGR 54 (382)
T ss_dssp -------CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTT
T ss_pred hHHHhhccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcc
Confidence 334444455679999999999999999999999999999999975554
No 245
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=93.03 E-value=0.08 Score=55.19 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 208 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 5799999999999999999999999999999988754
No 246
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=92.99 E-value=0.091 Score=55.35 Aligned_cols=39 Identities=18% Similarity=0.112 Sum_probs=35.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
.-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 212 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL 212 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc
Confidence 357999999999999999999999999999999987654
No 247
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.97 E-value=0.097 Score=51.28 Aligned_cols=33 Identities=33% Similarity=0.477 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 359999999999999999999999999999874
No 248
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=92.96 E-value=0.068 Score=56.09 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~ 222 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ 222 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 5799999999999999999999999999999988754
No 249
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.91 E-value=0.077 Score=53.00 Aligned_cols=36 Identities=11% Similarity=0.048 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~G 58 (523)
..|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~ 202 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLN 202 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCC
Confidence 479999999999999999999999999999988754
No 250
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.87 E-value=0.072 Score=49.45 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.|+|||+|--|..+|..|.+.|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 58999999999999999999999999999864
No 251
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=92.86 E-value=0.089 Score=53.92 Aligned_cols=37 Identities=24% Similarity=0.276 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 180 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV 180 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch
Confidence 4799999999999999999999999999999988754
No 252
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.83 E-value=0.097 Score=51.59 Aligned_cols=37 Identities=14% Similarity=0.146 Sum_probs=33.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
.....|.|||+|.-|...|..|+++|++|.++|++..
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3446799999999999999999999999999999763
No 253
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=92.83 E-value=0.1 Score=55.73 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
...|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 45799999999999999999999999999999865
No 254
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=92.83 E-value=0.097 Score=54.29 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=34.6
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
+|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 8999999999999999999999999999999987654
No 255
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=92.80 E-value=0.093 Score=51.07 Aligned_cols=36 Identities=14% Similarity=0.083 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~G 58 (523)
..|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 179 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR 179 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC
Confidence 579999999999999999999999999999998773
No 256
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.68 E-value=0.074 Score=55.48 Aligned_cols=37 Identities=19% Similarity=0.154 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 214 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP 214 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 5799999999999999999999999999999988754
No 257
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.63 E-value=0.099 Score=52.76 Aligned_cols=39 Identities=15% Similarity=0.157 Sum_probs=32.2
Q ss_pred CCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 17 PIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 17 ~l~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
++++....|.|||.|.-|...|..|+++|++|.++|++.
T Consensus 17 ~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 17 NLYFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhhhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 345566789999999999999999999999999999874
No 258
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.48 E-value=0.12 Score=47.69 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
...|.|||+|.-|...|..|+++|++|.+++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45799999999999999999999999999998865
No 259
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=92.47 E-value=0.11 Score=55.63 Aligned_cols=36 Identities=28% Similarity=0.305 Sum_probs=33.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
....|+|||+|.+|+-+|..|++.|.+|+++++.++
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 445799999999999999999999999999999875
No 260
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=92.44 E-value=0.1 Score=54.61 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 222 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR 222 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc
Confidence 5799999999999999999999999999999988653
No 261
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=92.37 E-value=0.11 Score=50.58 Aligned_cols=35 Identities=20% Similarity=0.120 Sum_probs=33.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~ 57 (523)
-.|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 47999999999999999999999999999999887
No 262
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.33 E-value=0.11 Score=54.82 Aligned_cols=37 Identities=8% Similarity=0.020 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR 213 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc
Confidence 4799999999999999999999999999999988754
No 263
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.31 E-value=0.11 Score=54.61 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
...|.|||+|.-|+..|..|+++|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4679999999999999999999999999999864
No 264
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=92.28 E-value=0.13 Score=52.49 Aligned_cols=39 Identities=26% Similarity=0.285 Sum_probs=35.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~ 61 (523)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~ 181 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV 181 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc
Confidence 469999999999999999999999999999999876543
No 265
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.28 E-value=0.12 Score=50.69 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=31.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
....|.|||+|.-|...|..|+++|++|.++|++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34579999999999999999999999999999875
No 266
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.22 E-value=0.13 Score=51.23 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=31.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~ 55 (523)
...|.|||+|..|..+|..|++.|+ +|.++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4689999999999999999999998 999999985
No 267
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.18 E-value=0.098 Score=51.65 Aligned_cols=47 Identities=21% Similarity=0.167 Sum_probs=30.7
Q ss_pred ccCCCC-CCCCC-CCCcccEEEECCChhHHHHHHHHhhCCC-eEEEeccC
Q 009881 8 SELPVP-PYPPI-EPTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (523)
Q Consensus 8 ~~~~~~-~~~~l-~~~~~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n 54 (523)
..|+-+ +|+.+ .+....|.|||+|.-|...|..|+++|+ +|.++|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 8 SSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -----------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred ccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 445544 45555 3334689999999999999999999999 99999997
No 268
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.15 E-value=0.13 Score=50.99 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|+++|++|.++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 469999999999999999999999999999976
No 269
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.13 E-value=0.13 Score=49.65 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
.|.|||+|.-|...|..|+++|++|.+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999998763
No 270
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=92.09 E-value=0.13 Score=53.73 Aligned_cols=37 Identities=24% Similarity=0.257 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++-.
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR 213 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC
Confidence 4799999999999999999999999999999987654
No 271
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=92.09 E-value=0.12 Score=50.71 Aligned_cols=36 Identities=19% Similarity=0.162 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~G 58 (523)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~ 195 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR 195 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC
Confidence 479999999999999999999999999999998763
No 272
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.08 E-value=0.12 Score=55.34 Aligned_cols=36 Identities=17% Similarity=0.134 Sum_probs=33.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
....|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 446799999999999999999999999999999875
No 273
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.05 E-value=0.13 Score=51.45 Aligned_cols=34 Identities=26% Similarity=0.310 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
...|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999863
No 274
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=92.04 E-value=0.11 Score=54.18 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~G 58 (523)
-.|+|||+|.+|+-+|..|++.|++|+++++++.+-
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~ 233 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM 233 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCC
Confidence 479999999999999999999999999999987753
No 275
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=92.04 E-value=0.13 Score=53.68 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP 211 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc
Confidence 4799999999999999999999999999999988764
No 276
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=92.02 E-value=0.23 Score=51.19 Aligned_cols=41 Identities=27% Similarity=0.294 Sum_probs=36.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCCCCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSH 60 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G-~~VlvlE~n~~~GG~ 60 (523)
|.++||||||+|++|+++|+.|+++| ++|+|+|+++.+|+.
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~g 62 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSG 62 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCCC
Confidence 46799999999999999999999999 999999996666543
No 277
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=92.00 E-value=0.13 Score=50.24 Aligned_cols=36 Identities=17% Similarity=0.074 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~G 58 (523)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 181 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc
Confidence 479999999999999999999999999999998763
No 278
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=92.00 E-value=0.14 Score=52.32 Aligned_cols=38 Identities=24% Similarity=0.207 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.+
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~ 190 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR 190 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh
Confidence 47999999999999999999999999999999987554
No 279
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=92.00 E-value=0.14 Score=50.28 Aligned_cols=36 Identities=14% Similarity=0.065 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~G 58 (523)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC
Confidence 479999999999999999999999999999998764
No 280
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.99 E-value=0.14 Score=51.64 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=32.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
+....|.|||+|.-|...|..|+++|++|.++++++
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 345689999999999999999999999999999874
No 281
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=91.98 E-value=0.18 Score=54.12 Aligned_cols=44 Identities=27% Similarity=0.357 Sum_probs=39.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~ 62 (523)
.+.+|||||||||++|+.+|+.|+++|++|+++|+++..||...
T Consensus 15 ~~~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS~ 58 (561)
T 3da1_A 15 SEKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSS 58 (561)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGG
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCccc
Confidence 44679999999999999999999999999999999987776543
No 282
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=91.97 E-value=0.13 Score=53.43 Aligned_cols=37 Identities=19% Similarity=0.150 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 186 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh
Confidence 4799999999999999999999999999999987654
No 283
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=91.95 E-value=0.12 Score=53.41 Aligned_cols=38 Identities=11% Similarity=0.082 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
..++|||+|..|+-.|..|++.|.+|+++|+.+++...
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~ 185 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL 185 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc
Confidence 37999999999999999999999999999999887543
No 284
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=91.92 E-value=0.13 Score=50.75 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~G 58 (523)
..|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~ 191 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC
Confidence 579999999999999999999999999999998763
No 285
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=91.92 E-value=0.12 Score=53.44 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=32.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCe-EEEeccCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKS-VLHLDPNPFY 57 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~-VlvlE~n~~~ 57 (523)
-+|+|||+|.+|+-+|..|++.|.+ |+++++++.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 4799999999999999999999999 9999998765
No 286
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.87 E-value=0.13 Score=50.92 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|+++|++|.++|++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 468999999999999999999999999999875
No 287
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=91.85 E-value=0.14 Score=50.47 Aligned_cols=37 Identities=8% Similarity=0.211 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~ 189 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc
Confidence 4799999999999999999999999999999987644
No 288
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=91.82 E-value=0.29 Score=48.81 Aligned_cols=42 Identities=31% Similarity=0.350 Sum_probs=37.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
++||||||+|++|+++|+.|+++|++|+|+|+++..+|...+
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~ 43 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSH 43 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCC
Confidence 489999999999999999999999999999999887665433
No 289
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.81 E-value=0.13 Score=50.62 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|.+.|..|+++|++|.+++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 468999999999999999999999999999975
No 290
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.79 E-value=0.14 Score=50.97 Aligned_cols=34 Identities=15% Similarity=0.284 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
...|.|||+|.-|...|..|+++|++|.++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~ 36 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGA 36 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChH
Confidence 3579999999999999999999999999999853
No 291
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=91.67 E-value=0.16 Score=52.83 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=32.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
...|.|||.|.+|+++|..|.+.|++|.+.|+++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 45799999999999999999999999999999863
No 292
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.57 E-value=0.14 Score=50.68 Aligned_cols=41 Identities=15% Similarity=0.243 Sum_probs=31.9
Q ss_pred CCCCCCCcccEEEECCChhHHHHHHHHhhCC----CeEEEeccCC
Q 009881 15 YPPIEPTAFDLIVIGTGLPESVISAAASASG----KSVLHLDPNP 55 (523)
Q Consensus 15 ~~~l~~~~~DVIIIGaGl~GL~aA~~La~~G----~~VlvlE~n~ 55 (523)
-+++++....|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 15 ~~~~~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 15 TENLYFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -------CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CchhccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 3556666678999999999999999999999 8999999875
No 293
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.49 E-value=0.16 Score=49.58 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 369999999999999999999999999999864
No 294
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=91.47 E-value=0.24 Score=51.55 Aligned_cols=40 Identities=15% Similarity=0.107 Sum_probs=35.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~ 61 (523)
.-.|+|||+|..|+-+|..|++.|.+|+++++.+++....
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~ 211 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL 211 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC
Confidence 3579999999999999999999999999999999876543
No 295
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=91.42 E-value=0.16 Score=54.31 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=33.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 188 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT 188 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch
Confidence 799999999999999999999999999999987654
No 296
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.33 E-value=0.22 Score=52.07 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 297
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=91.27 E-value=0.16 Score=49.62 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~G 58 (523)
-.|+|||+|..|+-.|..|++.|.+|+++++++++.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~ 191 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM 191 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC
Confidence 479999999999999999999999999999988763
No 298
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.27 E-value=0.16 Score=52.83 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|+..|..|+++|++|+++|++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999875
No 299
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=91.25 E-value=0.41 Score=48.28 Aligned_cols=38 Identities=24% Similarity=0.502 Sum_probs=35.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~G 58 (523)
.++||||||+|++|+++|+.|+++|++|+||||++..+
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFN 40 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 35899999999999999999999999999999998765
No 300
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.23 E-value=0.18 Score=52.22 Aligned_cols=35 Identities=29% Similarity=0.358 Sum_probs=31.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
....+.|||.|..||.+|+.|++.|++|+.+|-+.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 34579999999999999999999999999999875
No 301
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.21 E-value=0.19 Score=47.62 Aligned_cols=37 Identities=22% Similarity=0.287 Sum_probs=31.6
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
......|.|||+|.-|...|..|+++|++|++++++.
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3445679999999999999999999999999999874
No 302
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=91.05 E-value=0.21 Score=52.35 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
-.|+|||+|..|+-.|..|++.|.+|+++|+.+++...
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 236 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG 236 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc
Confidence 47999999999999999999999999999999987553
No 303
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=91.01 E-value=0.21 Score=51.83 Aligned_cols=38 Identities=16% Similarity=-0.001 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 185 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK 185 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc
Confidence 46999999999999999999999999999999887543
No 304
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.00 E-value=0.18 Score=49.26 Aligned_cols=35 Identities=17% Similarity=0.045 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
...|.|||.|.-|...|..|+++|++|.++|++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45799999999999999999999999999999864
No 305
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=90.99 E-value=0.14 Score=53.17 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=32.8
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFY 57 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~--G~~VlvlE~n~~~ 57 (523)
...|+|||+|.+|+-+|..|++. |.+|+++++++.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 45899999999999999999999 9999999998653
No 306
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.95 E-value=0.21 Score=52.38 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC-CC-eEEEeccCCC
Q 009881 23 FDLIVIGTGLPESVISAAASAS-GK-SVLHLDPNPF 56 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~-G~-~VlvlE~n~~ 56 (523)
..|.|||+|.-|+..|..|+++ |+ +|+++|++..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 5799999999999999999999 99 9999999876
No 307
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=90.91 E-value=0.2 Score=52.40 Aligned_cols=37 Identities=14% Similarity=0.065 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++++.+++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 224 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR 224 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc
Confidence 5799999999999999999999999999999888653
No 308
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=90.86 E-value=0.19 Score=49.13 Aligned_cols=37 Identities=22% Similarity=0.168 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
..|+|||+|..|+-+|..|++.|.+|+++++.+.+..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~ 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC
Confidence 5699999999999999999999999999999987644
No 309
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=90.83 E-value=0.44 Score=51.13 Aligned_cols=39 Identities=26% Similarity=0.433 Sum_probs=36.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
.++||||||||++|+.+|+.|+++|++|+|+|+++..+|
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 469999999999999999999999999999999986655
No 310
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.83 E-value=0.18 Score=52.22 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999864
No 311
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.78 E-value=0.21 Score=51.94 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=32.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
...+.|||+|.-|+..|..|+++|++|+++|++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35789999999999999999999999999999864
No 312
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=90.77 E-value=0.2 Score=49.99 Aligned_cols=37 Identities=11% Similarity=0.115 Sum_probs=33.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~ 200 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG 200 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC
Confidence 4799999999999999999999999999999987654
No 313
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.70 E-value=0.21 Score=48.78 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
+..|.|||+|.-|...|..|+ +|++|+++|++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 467999999999999999999 999999999875
No 314
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=90.69 E-value=0.23 Score=46.50 Aligned_cols=36 Identities=14% Similarity=0.236 Sum_probs=33.0
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n 54 (523)
+.....|+|||+|-.|...|..|.++|.+|+|++++
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 556678999999999999999999999999999975
No 315
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=90.67 E-value=0.12 Score=48.82 Aligned_cols=34 Identities=12% Similarity=0.160 Sum_probs=31.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n 54 (523)
....|.|||+|.-|...|..|+++|++|..++++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 3457999999999999999999999999999985
No 316
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.64 E-value=0.21 Score=46.53 Aligned_cols=36 Identities=14% Similarity=0.253 Sum_probs=31.1
Q ss_pred CCcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 20 PTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 20 ~~~~DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.....|+|.|+ |.-|..+|..|.++|++|.++.++.
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 34567999997 9999999999999999999999874
No 317
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=90.43 E-value=0.23 Score=52.69 Aligned_cols=38 Identities=13% Similarity=0.095 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc
Confidence 57999999999999999999999999999999876543
No 318
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=90.42 E-value=0.6 Score=43.50 Aligned_cols=52 Identities=17% Similarity=0.061 Sum_probs=41.3
Q ss_pred ChHHHHHHHHHHHc-CcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~~-Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
.++.+.+.+.++.. |.+++ ++.|++|..+ ++++++|++.+|++++||.||..
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~--~~~v~~v~~~~g~~i~a~~VV~A 120 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLE--GNRVVGVRTWEGPPARGEKVVLA 120 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEE--TTEEEEEEETTSCCEECSEEEEC
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEe--CCEEEEEEECCCCEEECCEEEEC
Confidence 36667777777776 77776 7899999876 66777888888989999999953
No 319
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.32 E-value=0.16 Score=53.04 Aligned_cols=34 Identities=15% Similarity=0.365 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.+.|||+|+|-.|..+|..|++.|++|+++|++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4679999999999999999999999999999974
No 320
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=90.28 E-value=0.33 Score=47.38 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=31.2
Q ss_pred ccEEEEC-CChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 23 FDLIVIG-TGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 23 ~DVIIIG-aGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
..|.||| +|.-|...|..|+++|++|.+++++..
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 3699999 999999999999999999999998764
No 321
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.23 E-value=0.15 Score=49.42 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=33.8
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
+.....|+|||+|-.|...|..|.+.|.+|+|++++..
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 44567899999999999999999999999999998653
No 322
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=90.16 E-value=0.3 Score=48.00 Aligned_cols=35 Identities=20% Similarity=0.142 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
...|.|||+|.-|...|..|++.|++|.+++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 36799999999999999999999999999998753
No 323
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=90.14 E-value=0.41 Score=48.02 Aligned_cols=52 Identities=13% Similarity=0.311 Sum_probs=43.1
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEe---CCCcEEEcCEEEE
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQDILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l---~~G~~i~A~~VI~ 332 (523)
..+.+.|.+.++..|++++.+++|++|..+ ++++.+|++ .++++++||.||.
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~~~~~~a~~vV~ 156 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIRHNNEIVDVRAKMVIA 156 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEEETTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEe--CCEEEEEEEEECCeEEEEEcCEEEE
Confidence 467788888888899999999999999887 677767776 3566899999884
No 324
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=90.09 E-value=0.17 Score=49.32 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|--|...|..|+++|++|.+++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 469999999999999999999999999999874
No 325
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=90.07 E-value=0.26 Score=48.97 Aligned_cols=32 Identities=19% Similarity=0.342 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n 54 (523)
..+.|||+|--|...|..|+++|++|.+++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 57999999999999999999999999999986
No 326
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=90.06 E-value=0.28 Score=52.75 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc
Confidence 47999999999999999999999999999999887654
No 327
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=90.05 E-value=0.17 Score=52.50 Aligned_cols=35 Identities=20% Similarity=0.161 Sum_probs=32.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~ 57 (523)
..|.|||.|.+|+.+|..|++.|++|.+.|.++..
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 46899999999999999999999999999998865
No 328
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=90.05 E-value=0.48 Score=47.42 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=35.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~G 58 (523)
++||||||+|++|+++|+.|+++|++|+|+|+++..|
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 5899999999999999999999999999999988766
No 329
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.04 E-value=0.28 Score=48.49 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
...|.|||+|.-|...|..|+++|++|.++|++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3579999999999999999999999999999874
No 330
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.99 E-value=0.25 Score=48.73 Aligned_cols=34 Identities=15% Similarity=0.401 Sum_probs=29.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
....|.|||+|--|...|..|+++|++|.++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 3467999999999999999999999999999 664
No 331
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=89.98 E-value=0.26 Score=47.77 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
.|.|||+|.-|...|..|+++|++|.+++++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 689999999999999999999999999999753
No 332
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=89.98 E-value=0.31 Score=50.77 Aligned_cols=37 Identities=22% Similarity=0.164 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
..|+|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 217 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP 217 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc
Confidence 5799999999999999999999999999999988754
No 333
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=89.98 E-value=0.26 Score=51.89 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~ 60 (523)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 220 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY 220 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc
Confidence 57999999999999999999999999999999987653
No 334
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.96 E-value=0.29 Score=47.00 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
..|+|.|+|.-|..++..|.++|++|..+.++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4699999999999999999999999999998753
No 335
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=89.93 E-value=0.26 Score=51.70 Aligned_cols=33 Identities=30% Similarity=0.401 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 336
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=89.87 E-value=0.23 Score=53.56 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n 54 (523)
-.|+|||+|..|+-+|..|++.|.+|++++++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 36999999999999999999999999999987
No 337
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=89.84 E-value=0.27 Score=50.17 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=31.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
-.|+|||+|..|+.+|..|...|.+|+++|++..
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4799999999999999999999999999999863
No 338
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.81 E-value=0.27 Score=48.34 Aligned_cols=33 Identities=30% Similarity=0.348 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~ 55 (523)
..|.|||+|-.|...|..|+++|+ +|.++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999999 999999874
No 339
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.79 E-value=0.34 Score=47.78 Aligned_cols=33 Identities=21% Similarity=0.439 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|+++|+ +|.++|++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 579999999999999999999999 999999986
No 340
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.70 E-value=0.27 Score=47.64 Aligned_cols=37 Identities=16% Similarity=0.090 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
..|+|||+|..|+-+|..|++.|.+|+++++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~ 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc
Confidence 5799999999999999999999999999999988755
No 341
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.67 E-value=0.22 Score=52.83 Aligned_cols=36 Identities=19% Similarity=0.107 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~G 58 (523)
..|+|||+|..|+-+|..|++.|.+|+++++.+++.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~ 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC
Confidence 479999999999999999999999999999998775
No 342
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=89.67 E-value=0.28 Score=50.68 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
...|.|||+|.-|+..|..|++ |++|+++|++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 3579999999999999999998 99999999875
No 343
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=89.61 E-value=0.33 Score=48.57 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||.|.-|...|..|.++|++|.++|++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 468999999999999999999999999999885
No 344
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=89.55 E-value=0.3 Score=44.74 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=29.6
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIG-aGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.|.||| +|..|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 488999 99999999999999999999999863
No 345
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=89.48 E-value=0.72 Score=48.42 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhh---CCCeEEEeccCCC
Q 009881 23 FDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPF 56 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~---~G~~VlvlE~n~~ 56 (523)
+||||||||++|+++|+.|++ .|.+|+|+|+++.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 699999999999999999999 9999999999864
No 346
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.48 E-value=0.32 Score=45.07 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|..|...|..|++.|++|.+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999863
No 347
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.46 E-value=0.3 Score=48.15 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~ 55 (523)
..|.|||+|..|...|..|+++|+ +|.++|++.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 479999999999999999999998 999999975
No 348
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=89.45 E-value=0.74 Score=49.00 Aligned_cols=37 Identities=8% Similarity=0.146 Sum_probs=34.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhh---CCCeEEEeccCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPF 56 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~---~G~~VlvlE~n~~ 56 (523)
+..+||||||||++|+++|+.|++ .|.+|+|+|+.+.
T Consensus 23 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 23 GKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 457899999999999999999999 9999999999764
No 349
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.38 E-value=0.18 Score=43.35 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|..|...|..|++.|.+|.+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 469999999999999999999999999999863
No 350
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.32 E-value=0.37 Score=47.28 Aligned_cols=34 Identities=29% Similarity=0.490 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
...|.|||.|.-|...|..|+++|++|.++|++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 351
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=89.12 E-value=0.3 Score=50.42 Aligned_cols=33 Identities=30% Similarity=0.301 Sum_probs=30.6
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
..-|||.|.-|+..|..|+++|++|+++|++..
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 578999999999999999999999999999853
No 352
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.11 E-value=0.31 Score=51.11 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=31.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
+++.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 456789999999999999999999999999999873
No 353
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.05 E-value=0.2 Score=46.58 Aligned_cols=34 Identities=18% Similarity=0.232 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEE-eccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLH-LDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~Vlv-lE~n~ 55 (523)
...|.|||+|.-|...|..|+++|++|.+ ++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 35799999999999999999999999999 88764
No 354
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=89.02 E-value=0.39 Score=47.45 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=32.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCC-eEEEeccC
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n 54 (523)
.+....|.|||+|..|..+|..|++.|. +|.++|.+
T Consensus 5 ~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 5 TIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 3445689999999999999999999999 99999997
No 355
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.96 E-value=0.34 Score=49.84 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|||||.|-.|..+|..|.+.|++|+++|++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 469999999999999999999999999999985
No 356
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=88.92 E-value=0.34 Score=46.77 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~ 57 (523)
..|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 47999999999999999999999999999999876
No 357
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=88.91 E-value=0.8 Score=47.31 Aligned_cols=37 Identities=27% Similarity=0.541 Sum_probs=34.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~ 57 (523)
.++||||||||++|+++|+.|+++|++|+|+|+++..
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 3689999999999999999999999999999998764
No 358
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=88.89 E-value=0.36 Score=47.03 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++++++++.+
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~ 191 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA 191 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc
Confidence 4799999999999999999999999999999988744
No 359
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.80 E-value=0.26 Score=47.71 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
.|.|||+|.-|...|..|+++|++|.++|++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 589999999999999999999999999999853
No 360
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=88.80 E-value=0.31 Score=49.84 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.|.|||+|..|+..|..|++ |++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58899999999999999999 99999999874
No 361
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=88.74 E-value=0.28 Score=48.48 Aligned_cols=30 Identities=20% Similarity=0.265 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEecc
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDP 53 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~ 53 (523)
.|.|||+|.-|...|..|+++|++|.++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 489999999999999999999999999998
No 362
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=88.68 E-value=0.26 Score=48.14 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhhC-----C-CeEEEeccC
Q 009881 23 FDLIVIGTGLPESVISAAASAS-----G-KSVLHLDPN 54 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~-----G-~~VlvlE~n 54 (523)
..|.|||+|.-|...|..|+++ | ++|.++++.
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r~ 46 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIARG 46 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEcH
Confidence 5799999999999999999999 9 999999873
No 363
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=88.65 E-value=0.28 Score=49.65 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
-.|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999885
No 364
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.65 E-value=0.41 Score=47.52 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~ 55 (523)
..|.|||+|..|...|..|++.|+ +|.++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999999 999999975
No 365
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=88.61 E-value=0.39 Score=50.32 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=32.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
...+|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999875
No 366
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=88.58 E-value=0.38 Score=47.18 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~ 55 (523)
.|.|||+|..|...|..|+..|+ +|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 58999999999999999999999 999999874
No 367
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=88.55 E-value=0.39 Score=47.16 Aligned_cols=32 Identities=16% Similarity=0.082 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|--|.+.|..|+ +|.+|.+++++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 999999999875
No 368
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=88.48 E-value=0.78 Score=46.52 Aligned_cols=37 Identities=27% Similarity=0.412 Sum_probs=34.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~ 57 (523)
.++||||||||++|+++|+.|++.|++|+|+|+++..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~ 40 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFP 40 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 4589999999999999999999999999999999754
No 369
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=88.48 E-value=0.26 Score=49.53 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 370
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=88.45 E-value=0.51 Score=49.11 Aligned_cols=36 Identities=22% Similarity=0.129 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFY 57 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~~~ 57 (523)
.-+|+|||+|..|+-+|..+.+.|. +|++++++++.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 3579999999999999999999997 59999998865
No 371
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.37 E-value=0.39 Score=46.75 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|+++|++|.++|++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 468999999999999999999999999999874
No 372
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=88.33 E-value=0.47 Score=47.00 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~ 55 (523)
..|.|||+|..|..+|..|+..|+ +|.++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999874
No 373
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=88.28 E-value=0.44 Score=49.91 Aligned_cols=34 Identities=9% Similarity=-0.023 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
-.++|||+|..|+-.|..|++.|.+|+++++...
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP 219 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc
Confidence 4699999999999999999999999999998653
No 374
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=87.97 E-value=1.1 Score=48.13 Aligned_cols=53 Identities=19% Similarity=0.279 Sum_probs=43.9
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeC------CC---------cEEEcCEEEE
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA------SG---------QDILSHKLVL 332 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~------~G---------~~i~A~~VI~ 332 (523)
.++.+.|.+.++..|.+|+.++.|++|..++ ++++++|++. +| .+++||.||.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~-~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~ 211 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHE-DGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIF 211 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECT-TSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CCCEEEEEeCCccccCCCCcccccCCceEEECCEEEE
Confidence 4788889888888999999999999998762 4677788875 33 6899999995
No 375
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=87.89 E-value=0.45 Score=47.11 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHH-HHHHHhhCCCeEEEeccCCC
Q 009881 23 FDLIVIGTGLPESV-ISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 23 ~DVIIIGaGl~GL~-aA~~La~~G~~VlvlE~n~~ 56 (523)
..|.|||.|-+|++ +|..|.+.|++|.+.|+++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 46899999999996 78899999999999999864
No 376
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=87.80 E-value=0.76 Score=46.37 Aligned_cols=37 Identities=14% Similarity=0.297 Sum_probs=34.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~ 57 (523)
.++||||||||++|+++|..|+++|.+|+|+|+++..
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 4589999999999999999999999999999998764
No 377
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=87.76 E-value=0.41 Score=45.44 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=31.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCC----CeEEEeccCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASG----KSVLHLDPNPF 56 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G----~~VlvlE~n~~ 56 (523)
...|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 357999999999999999999999 79999998865
No 378
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.64 E-value=0.48 Score=46.57 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhC--CCeEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~--G~~VlvlE~n~ 55 (523)
.|.|||+|..|...|..|++. |.+|.++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999996 89999999985
No 379
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.62 E-value=0.46 Score=49.87 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~--G~~VlvlE~n~ 55 (523)
..|.|||+|.-|+..|..|+++ |++|+++|++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 79999999863
No 380
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=87.58 E-value=0.63 Score=49.18 Aligned_cols=32 Identities=13% Similarity=0.074 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n 54 (523)
-.++|||+|..|+-.|..|++.|.+|+++++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 46999999999999999999999999999985
No 381
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=87.57 E-value=0.42 Score=49.96 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~--G~~VlvlE~n~ 55 (523)
..|.|||+|..|+..|..|+++ |++|+++|++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 89999999864
No 382
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=87.53 E-value=0.62 Score=44.80 Aligned_cols=33 Identities=12% Similarity=0.150 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n 54 (523)
...|+|+|+|-.|..+|.+|++.|.+|.+++++
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 346999999999999999999999999999886
No 383
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.52 E-value=0.5 Score=45.31 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.|.|||+|.-|...|..|++.|++|.+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 48899999999999999999999999999874
No 384
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=87.50 E-value=0.47 Score=45.33 Aligned_cols=33 Identities=9% Similarity=-0.088 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
..|+|||+|..|+-+|..|++.| +|+++++.+.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 57999999999999999999999 9999998775
No 385
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=87.44 E-value=0.49 Score=47.38 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
.|+|+|+|..|..+|.++.+.|++|.++|++..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 589999999999999999999999999998753
No 386
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=87.41 E-value=0.31 Score=48.64 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=32.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCC-------CeEEEeccCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASG-------KSVLHLDPNPF 56 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G-------~~VlvlE~n~~ 56 (523)
...|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 357999999999999999999999 99999999875
No 387
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=87.37 E-value=0.5 Score=45.84 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|++.|++|.+++++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999864
No 388
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=87.32 E-value=1.2 Score=46.24 Aligned_cols=37 Identities=14% Similarity=0.048 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~--G~~VlvlE~n~~~G 58 (523)
..||||||+|++|++||..|++. |++|+++|++++.|
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 47999999999999999999999 99999999999875
No 389
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=87.29 E-value=0.44 Score=47.00 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-CeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G-~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|+++| ++|.++|++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 46999999999999999999999 9999999985
No 390
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=87.12 E-value=0.59 Score=49.80 Aligned_cols=36 Identities=14% Similarity=0.008 Sum_probs=32.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~G 58 (523)
-.++|||+|..|+=.|..+++-|.+|+++++...+-
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~ 259 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR 259 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc
Confidence 579999999999999999999999999999866553
No 391
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=87.12 E-value=0.46 Score=45.14 Aligned_cols=32 Identities=9% Similarity=0.240 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhCC-CeEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G-~~VlvlE~n~ 55 (523)
.|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 4889999999999999999999 9999999874
No 392
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=87.03 E-value=0.53 Score=45.56 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999875
No 393
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=86.85 E-value=0.58 Score=48.97 Aligned_cols=34 Identities=12% Similarity=0.180 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999863
No 394
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=86.82 E-value=0.51 Score=48.28 Aligned_cols=33 Identities=30% Similarity=0.457 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
-.|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 479999999999999999999999999999875
No 395
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.82 E-value=0.29 Score=45.76 Aligned_cols=32 Identities=6% Similarity=-0.030 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..++|+|+|-.|...|..|.+.|+ |+++|++.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 469999999999999999999999 99999874
No 396
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=86.78 E-value=1.3 Score=46.39 Aligned_cols=43 Identities=28% Similarity=0.333 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEec--------cCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLD--------PNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~-~G~~VlvlE--------~n~~~GG~~~s 63 (523)
.+|||||||+|.+|++||..|++ .|++|+++| +++.+||.|..
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~ 53 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVN 53 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHH
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccC
Confidence 46999999999999999999999 999999999 46789997654
No 397
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=86.74 E-value=0.63 Score=42.40 Aligned_cols=32 Identities=31% Similarity=0.364 Sum_probs=29.3
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIG-aGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.|+|+| +|..|..++..|.++|++|.++.|+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 489999 59999999999999999999999874
No 398
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=86.66 E-value=1.4 Score=45.93 Aligned_cols=49 Identities=27% Similarity=0.228 Sum_probs=39.5
Q ss_pred CCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 14 PYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 14 ~~~~l~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
...++.+.++||||||+|++|++||..|++.|++|+++|+ +.+||.|..
T Consensus 18 ~~~~M~~~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 66 (484)
T 3o0h_A 18 GPGSMGSFDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVI 66 (484)
T ss_dssp ------CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHH
T ss_pred CCCCCCcCCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceec
Confidence 3334444579999999999999999999999999999999 789997654
No 399
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=86.64 E-value=1.4 Score=46.74 Aligned_cols=38 Identities=5% Similarity=0.161 Sum_probs=34.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhh---CCCeEEEeccCCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPFY 57 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~---~G~~VlvlE~n~~~ 57 (523)
+..+||||||||++|+++|+.|++ .|.+|+|+|+.+..
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~ 43 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIP 43 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCC
Confidence 346899999999999999999999 99999999997643
No 400
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=86.63 E-value=1.4 Score=46.24 Aligned_cols=43 Identities=33% Similarity=0.364 Sum_probs=38.9
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEec--------cCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLD--------PNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~-~G~~VlvlE--------~n~~~GG~~~s 63 (523)
.++||||||+|.+|++||..|++ .|++|+++| +++.+||.|..
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~ 57 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVN 57 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHH
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeec
Confidence 46999999999999999999999 999999999 46789997654
No 401
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.59 E-value=0.56 Score=44.83 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|+|.|+|.-|..++.+|.++|++|..+.++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 469999999999999999999999999999875
No 402
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=86.47 E-value=0.76 Score=45.12 Aligned_cols=42 Identities=14% Similarity=0.140 Sum_probs=33.4
Q ss_pred CCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 14 PYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 14 ~~~~l~~~~~DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
+.++-+.....|+|.|+ |.-|..+|..|++.|++|.+++++.
T Consensus 12 ~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 12 SGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp --CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred cCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34444444557999997 9999999999999999999999864
No 403
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=86.42 E-value=0.54 Score=48.94 Aligned_cols=36 Identities=11% Similarity=0.039 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHHHh--------------------hCCC-eEEEeccCCCC
Q 009881 22 AFDLIVIGTGLPESVISAAAS--------------------ASGK-SVLHLDPNPFY 57 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La--------------------~~G~-~VlvlE~n~~~ 57 (523)
.-.|+|||+|..|+-+|..|+ +.|. +|.++++++..
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 357999999999999999999 6786 79999997643
No 404
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=86.30 E-value=0.6 Score=45.21 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|++.|++|.++|++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 369999999999999999999999999999874
No 405
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=86.29 E-value=0.51 Score=52.14 Aligned_cols=33 Identities=30% Similarity=0.287 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 369999999999999999999999999999875
No 406
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.23 E-value=0.54 Score=44.64 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=30.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEeccC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n 54 (523)
...|+|||+|-.|+.+|..|+++|. +++++|+.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 3579999999999999999999996 89999985
No 407
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=86.21 E-value=0.7 Score=45.77 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=32.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~ 55 (523)
....|.|||+|..|.++|..|+..|. +|.++|.+.
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 44689999999999999999999999 999999876
No 408
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=86.21 E-value=0.61 Score=45.05 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=30.6
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+ |.-|...|..|+++|++|.+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999999864
No 409
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=86.20 E-value=1.4 Score=46.17 Aligned_cols=39 Identities=38% Similarity=0.497 Sum_probs=34.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
.++||||||||++|+++|+.|++.|++|+|+|+++..+|
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 568999999999999999999999999999999875443
No 410
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=86.14 E-value=1.7 Score=45.52 Aligned_cols=39 Identities=23% Similarity=0.394 Sum_probs=35.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~--G~~VlvlE~n~~~G 58 (523)
+..+||||||+|.+|+.||..|++. |.+|+++|++++.|
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 4579999999999999999999887 89999999998765
No 411
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=86.12 E-value=0.64 Score=48.75 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999864
No 412
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=86.05 E-value=0.85 Score=47.56 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
-.++|||+|..|+-.|..|++.|.+|+++++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 479999999999999999999999999999854
No 413
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=85.98 E-value=0.65 Score=47.11 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.-.|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 414
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=85.96 E-value=0.66 Score=44.54 Aligned_cols=32 Identities=22% Similarity=0.480 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~ 55 (523)
.|.|||+|.-|...|..|++.|+ +|.++|++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 58999999999999999999999 999999874
No 415
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=85.91 E-value=0.55 Score=46.34 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~ 55 (523)
.|.|||+|..|...|..|+++|+ +|.++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999874
No 416
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=85.89 E-value=0.72 Score=44.54 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC---eEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGK---SVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~---~VlvlE~n~ 55 (523)
...|.|||+|.-|...|..|.++|+ +|.++|++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3569999999999999999999999 999999875
No 417
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=85.84 E-value=0.65 Score=45.78 Aligned_cols=39 Identities=23% Similarity=0.310 Sum_probs=31.3
Q ss_pred CCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009881 19 EPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNPFY 57 (523)
Q Consensus 19 ~~~~~DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~~~ 57 (523)
......|+|.|| |.-|..++..|.+.|++|.+++++..-
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 55 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG 55 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 334567999998 999999999999999999999988643
No 418
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=85.75 E-value=0.79 Score=41.14 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.1
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|+|+|+ |.-|..++..|.+.|++|.++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 46899998 9999999999999999999999874
No 419
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=85.72 E-value=0.73 Score=42.15 Aligned_cols=32 Identities=34% Similarity=0.529 Sum_probs=29.3
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.|+|.|+ |.-|..++..|.++|++|.++.|+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4899997 9999999999999999999998863
No 420
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=85.66 E-value=1.7 Score=38.22 Aligned_cols=50 Identities=20% Similarity=0.074 Sum_probs=40.8
Q ss_pred ChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
.++.+.+.+.++..|.+++++ +|++|..+ ++. +.|++.+| ++.||.||..
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~--~~~-~~v~~~~g-~i~ad~vI~A 105 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDM--GGV-FEVETEEG-VEKAERLLLC 105 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEEC--SSS-EEEECSSC-EEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEc--CCE-EEEEECCC-EEEECEEEEC
Confidence 477888888888999999999 99999765 333 56777777 8999999964
No 421
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=85.63 E-value=1.7 Score=44.29 Aligned_cols=43 Identities=26% Similarity=0.277 Sum_probs=39.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~ 62 (523)
|.++||||||+|++|+.+|+.|++.|.+|+|+|+++.+|+.+.
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~ 44 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKIL 44 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcE
Confidence 4569999999999999999999999999999999999887653
No 422
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=85.58 E-value=0.82 Score=45.19 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=31.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~ 55 (523)
....|.|||+|..|.++|..|+..|. +|.++|.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 34679999999999999999999998 999999976
No 423
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.57 E-value=0.69 Score=48.70 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999874
No 424
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=85.57 E-value=0.38 Score=48.98 Aligned_cols=59 Identities=15% Similarity=0.085 Sum_probs=41.2
Q ss_pred EEeecCCc---ChHHHHHHHHHHHcCcEEEcCCcee---------EEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009881 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVI---------SLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (523)
Q Consensus 271 ~~~p~gG~---~eL~qal~r~~a~~Gg~~~L~~~V~---------~I~~~~~~g~~~gV~l~~G~~i~A~~VI~~ 333 (523)
.+.|..|. ..+.++|.+.+...|++++.+++|+ +|..+ ++++ +|++.+| +++||.||..
T Consensus 161 ~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~--~~~v-~v~~~~g-~i~a~~VV~A 231 (405)
T 3c4n_A 161 RVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT--NTHQ-IVVHETR-QIRAGVIIVA 231 (405)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCE-EEEEEEEEEC
T ss_pred EEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee--CCeE-EEEECCc-EEECCEEEEC
Confidence 44555553 5788999999989999999999999 88655 4554 7776555 7999998853
No 425
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=85.57 E-value=0.68 Score=46.71 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|+|+|+|-.|+.+|..|+..|.+|+++|++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999874
No 426
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=85.54 E-value=0.66 Score=48.56 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999863
No 427
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=85.50 E-value=0.69 Score=46.52 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
-.|+|+|+|-.|+.+|..|...|.+|+++|++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 428
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=85.49 E-value=0.71 Score=45.97 Aligned_cols=33 Identities=18% Similarity=0.091 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|++.|++|.+.+++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 359999999999999999999999999999875
No 429
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=85.49 E-value=1.5 Score=46.07 Aligned_cols=38 Identities=39% Similarity=0.621 Sum_probs=35.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~ 57 (523)
+.++||||||||++||++|+.|++.|++|+|+|+++..
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~ 42 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFP 42 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCC
Confidence 35699999999999999999999999999999999754
No 430
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=85.46 E-value=0.83 Score=44.05 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=30.6
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009881 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNPFY 57 (523)
Q Consensus 24 DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~~~ 57 (523)
.|+|.|| |+-|..++.+|.++|++|.++-|++..
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 5899997 999999999999999999999887543
No 431
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=85.29 E-value=0.81 Score=44.04 Aligned_cols=34 Identities=15% Similarity=0.282 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
...|+|||+|-+|..+|.+|++.|.+|.|+.|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999998874
No 432
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=85.14 E-value=1.8 Score=45.58 Aligned_cols=36 Identities=11% Similarity=0.255 Sum_probs=33.5
Q ss_pred CcccEEEECCChhHHHHHHHHhh------------CCCeEEEeccCCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASA------------SGKSVLHLDPNPF 56 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~------------~G~~VlvlE~n~~ 56 (523)
..+||||||||++|+++|+.|++ .|.+|+|+|+++.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 45899999999999999999999 9999999999764
No 433
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=85.14 E-value=0.69 Score=44.51 Aligned_cols=34 Identities=6% Similarity=0.133 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
...|+|+|+|-.|..+|.+|++.|.+|.++.|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3469999999999999999999999999999873
No 434
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=85.13 E-value=0.5 Score=47.71 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-------CeEEEeccCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASG-------KSVLHLDPNPF 56 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G-------~~VlvlE~n~~ 56 (523)
..|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 36999999999999999999999 99999998765
No 435
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=85.11 E-value=1.8 Score=47.19 Aligned_cols=42 Identities=31% Similarity=0.318 Sum_probs=37.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~ 61 (523)
+.++||||||+|++||+||+.|+++|.+|+||||....||..
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s 44 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHS 44 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGG
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcc
Confidence 346899999999999999999999999999999998776654
No 436
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=85.09 E-value=0.47 Score=48.34 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=27.9
Q ss_pred ccEEEECCChhHHHHHHHHhh-CCCeEEEec
Q 009881 23 FDLIVIGTGLPESVISAAASA-SGKSVLHLD 52 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~-~G~~VlvlE 52 (523)
..|.|||+|.-|...|..|++ +|++|.+++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 469999999999999999998 599999999
No 437
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=85.05 E-value=0.8 Score=44.96 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~ 55 (523)
..|.|||+|..|...|..|+..|. +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 469999999999999999999997 999999874
No 438
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=85.03 E-value=1.5 Score=45.44 Aligned_cols=42 Identities=31% Similarity=0.317 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~~s 63 (523)
.++||||||+|.+|+++|..|++.|++|+++|+ +.+||.|..
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 45 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVI 45 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccc
Confidence 469999999999999999999999999999999 789997653
No 439
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=84.83 E-value=0.64 Score=51.44 Aligned_cols=36 Identities=8% Similarity=0.153 Sum_probs=32.9
Q ss_pred ccEEEEC--CChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIG--TGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIG--aGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+||| +|..|+-+|..|++.|.+|+++++.+ +..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~ 566 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN 566 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc
Confidence 4799998 99999999999999999999999988 544
No 440
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=84.83 E-value=1.7 Score=46.66 Aligned_cols=42 Identities=29% Similarity=0.244 Sum_probs=37.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~ 61 (523)
+.++||||||+|++||+||+.|+++|.+|+||||+...||..
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s 46 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHT 46 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcc
Confidence 346899999999999999999999999999999998876643
No 441
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=84.73 E-value=0.83 Score=45.29 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=30.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~ 55 (523)
...|.|||+|..|.++|..|+..|. +|.++|.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4579999999999999999999997 899999863
No 442
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=84.72 E-value=0.73 Score=44.30 Aligned_cols=31 Identities=13% Similarity=0.082 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.|.|||+|.-|...|..|++ |++|.+++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 58999999999999999999 99999999875
No 443
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=84.69 E-value=0.47 Score=54.32 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch
Confidence 4799999999999999999999999999999988754
No 444
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=84.64 E-value=0.68 Score=45.38 Aligned_cols=32 Identities=22% Similarity=0.378 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CeEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G--~~VlvlE~n~ 55 (523)
.|.|||+|..|...|..|+++| .+|.++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6899999999999999999999 7999999874
No 445
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=84.61 E-value=0.89 Score=44.86 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~ 55 (523)
...|.|||+|..|..+|..|+..|. +|.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 999999874
No 446
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=84.61 E-value=0.58 Score=51.64 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 369999999999999999999999999999875
No 447
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=84.59 E-value=0.85 Score=43.18 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|++.|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 469999999999999999999999999999874
No 448
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=84.57 E-value=0.92 Score=42.73 Aligned_cols=33 Identities=12% Similarity=0.206 Sum_probs=28.5
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 24 DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
-|+|.|+ |--|..+|..|++.|.+|.+++++..
T Consensus 24 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~ 57 (251)
T 3orf_A 24 NILVLGGSGALGAEVVKFFKSKSWNTISIDFREN 57 (251)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4788886 56799999999999999999998764
No 449
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=84.54 E-value=1 Score=43.90 Aligned_cols=34 Identities=15% Similarity=0.109 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~ 55 (523)
...|+|||+|-.|..+|..|++.|. +|.++.|+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3469999999999999999999997 999998873
No 450
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=84.24 E-value=0.77 Score=47.78 Aligned_cols=36 Identities=11% Similarity=0.065 Sum_probs=32.6
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009881 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (523)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n 54 (523)
+.....|+|||+|-.|...|..|.+.|.+|+|++++
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 445567999999999999999999999999999985
No 451
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=84.23 E-value=0.74 Score=43.79 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCe-EEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKS-VLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~-VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|++.|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4799999999999999999999999 99999864
No 452
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=84.11 E-value=1.3 Score=47.55 Aligned_cols=42 Identities=21% Similarity=0.204 Sum_probs=37.2
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009881 18 IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (523)
Q Consensus 18 l~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG 59 (523)
-+|.++||||||||++|+++|+.|++.|++|+|+|+++..++
T Consensus 19 ~~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~ 60 (591)
T 3i3l_A 19 SHMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY 60 (591)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC
T ss_pred CcCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC
Confidence 456679999999999999999999999999999999976544
No 453
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.07 E-value=0.86 Score=46.09 Aligned_cols=33 Identities=33% Similarity=0.395 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 454
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=84.05 E-value=0.87 Score=48.36 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
...|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 45799999999999999999999999999998653
No 455
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=84.00 E-value=1.1 Score=44.24 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=29.7
Q ss_pred CcccEEEECCC-hhHHHHHHHHhhCCCeEEEeccC
Q 009881 21 TAFDLIVIGTG-LPESVISAAASASGKSVLHLDPN 54 (523)
Q Consensus 21 ~~~DVIIIGaG-l~GL~aA~~La~~G~~VlvlE~n 54 (523)
....|+|||+| +.|..+|..|.+.|.+|++++++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 44689999999 67999999999999999988664
No 456
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=83.89 E-value=1.7 Score=41.84 Aligned_cols=43 Identities=12% Similarity=0.027 Sum_probs=32.6
Q ss_pred CCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 13 PPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 13 ~~~~~l~~~~~DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
|..+..+....-|+|.|+ |--|..+|..|++.|++|.+++++.
T Consensus 17 ~~~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~ 60 (302)
T 1w6u_A 17 AMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM 60 (302)
T ss_dssp CCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 333444444456888875 6789999999999999999998864
No 457
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=83.77 E-value=0.98 Score=42.75 Aligned_cols=42 Identities=10% Similarity=-0.088 Sum_probs=31.5
Q ss_pred CCCCCCCCcccEEEECC---ChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 14 PYPPIEPTAFDLIVIGT---GLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 14 ~~~~l~~~~~DVIIIGa---Gl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
+.+.......-|+|.|+ |--|..+|..|++.|.+|.++++++
T Consensus 6 ~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~ 50 (271)
T 3ek2_A 6 HHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD 50 (271)
T ss_dssp ---CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch
Confidence 33444445567899996 3678999999999999999998874
No 458
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=83.75 E-value=0.93 Score=45.90 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=32.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~ 55 (523)
.+-.|||+|+|-+|..+|..|...|. +|.++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 44689999999999999999999998 999999984
No 459
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=83.71 E-value=1 Score=42.16 Aligned_cols=43 Identities=19% Similarity=0.106 Sum_probs=31.7
Q ss_pred CCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 13 PPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 13 ~~~~~l~~~~~DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
++.++.+....-|+|.|+ |--|..+|..|++.|.+|.+++++.
T Consensus 5 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 48 (249)
T 3f9i_A 5 HHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNE 48 (249)
T ss_dssp ----CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH
Confidence 345555556667888886 5569999999999999999998853
No 460
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=83.71 E-value=0.83 Score=41.94 Aligned_cols=33 Identities=24% Similarity=0.376 Sum_probs=30.2
Q ss_pred ccEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIG-aGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|+|.| +|.-|..++..|.+.|++|.++.++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 4699999 59999999999999999999999974
No 461
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=83.67 E-value=1.9 Score=46.59 Aligned_cols=38 Identities=29% Similarity=0.364 Sum_probs=34.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC-CCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYG 58 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~-~~G 58 (523)
.+|||||||||++|+.||++|++.|.+|+++|++. .+|
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG 64 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIG 64 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccC
Confidence 46999999999999999999999999999999984 444
No 462
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=83.65 E-value=1.7 Score=46.95 Aligned_cols=42 Identities=21% Similarity=0.160 Sum_probs=37.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009881 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~ 61 (523)
+.++||||||+|++||.||+.|+++|.+|+||||....||..
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s 57 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHT 57 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred cccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 346899999999999999999999999999999988776653
No 463
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=83.63 E-value=1 Score=42.39 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC----eEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGK----SVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~----~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|.++|+ +|.+++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 368999999999999999999998 999999974
No 464
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=83.33 E-value=0.92 Score=41.51 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=29.6
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIG-aGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.|+|.| +|.-|..++..|.++|++|..+.++.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 489999 89999999999999999999999875
No 465
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=83.30 E-value=0.86 Score=43.88 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
...|+|||+|-.|...|..|.+.|.+|.+++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999999873
No 466
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=83.29 E-value=0.98 Score=45.61 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n 54 (523)
.+..|+|+|+|-+|..+|..|...|. +|.++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45689999999999999999999997 89999998
No 467
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=83.23 E-value=0.83 Score=44.57 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=27.2
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
.|-+||-|.-|...|..|.++|++|.++|++..
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 599999999999999999999999999998763
No 468
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=83.21 E-value=1.3 Score=42.18 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.+.|||+|-.|...|..|.+.|.+|.+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999873
No 469
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=83.07 E-value=1.7 Score=41.05 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=29.9
Q ss_pred CcccEEEECC-Ch-hHHHHHHHHhhCCCeEEEeccCC
Q 009881 21 TAFDLIVIGT-GL-PESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 21 ~~~DVIIIGa-Gl-~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
...-|+|.|+ |- -|..+|..|++.|.+|++++++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 3456899998 74 89999999999999999999864
No 470
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=83.07 E-value=1 Score=45.67 Aligned_cols=39 Identities=21% Similarity=0.201 Sum_probs=35.1
Q ss_pred cccEEEECC-ChhHHHHHHHHhhCCC---eEEEeccCC-CCCCC
Q 009881 22 AFDLIVIGT-GLPESVISAAASASGK---SVLHLDPNP-FYGSH 60 (523)
Q Consensus 22 ~~DVIIIGa-Gl~GL~aA~~La~~G~---~VlvlE~n~-~~GG~ 60 (523)
.-.|+|||+ |..|+.|+..+..-|. .|.++|.+. .-||+
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 468999999 9999999999999997 999999987 55776
No 471
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=83.06 E-value=0.96 Score=42.90 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=28.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEecc
Q 009881 24 DLIVIGTGLPESVISAAASASGKSVLHLDP 53 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~~VlvlE~ 53 (523)
.|.|||+|.-|...|..|+++|++|.+.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 488999999999999999999999999876
No 472
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=82.87 E-value=1.2 Score=43.12 Aligned_cols=32 Identities=6% Similarity=0.236 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|+|+|+|-.|..+|.+|++.| +|.+++++.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 46999999999999999999999 999998863
No 473
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=82.84 E-value=0.92 Score=52.22 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCC-eEEEeccCCC
Q 009881 24 DLIVIGTGLPESVISAAASASGK-SVLHLDPNPF 56 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~-~VlvlE~n~~ 56 (523)
.|+|||+|..|+-+|..|++.|. +|++++++++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 89999999999999999999995 8999999873
No 474
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=82.82 E-value=0.85 Score=50.05 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=35.1
Q ss_pred ccEEEEC--CChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009881 23 FDLIVIG--TGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (523)
Q Consensus 23 ~DVIIIG--aGl~GL~aA~~La~~G~~VlvlE~n~~~GG~~ 61 (523)
-+|+||| +|..|+-+|..|++.|.+|+++++.+.+....
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~ 564 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT 564 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc
Confidence 4599999 99999999999999999999999998876543
No 475
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=82.66 E-value=0.87 Score=43.93 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|++.|++|.+++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 368999999999999999999999999998 54
No 476
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=82.66 E-value=1.1 Score=43.67 Aligned_cols=35 Identities=20% Similarity=0.187 Sum_probs=31.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
....|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34579999999999999999999999999999874
No 477
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=82.50 E-value=0.96 Score=43.60 Aligned_cols=33 Identities=9% Similarity=0.181 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~--G~~VlvlE~n~ 55 (523)
..|.|||+|.-|...|..|+++ |.+|.++|++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 4799999999999999999998 68999999864
No 478
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=82.02 E-value=1.6 Score=48.22 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
--.|.|||+|.-|.-.|..++++|++|+++|.++
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 3579999999999999999999999999999875
No 479
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=82.00 E-value=1.1 Score=46.40 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|+|+|+|..|..+|..|++.|.+|.+++++.
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 468999999999999999999999999998863
No 480
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=81.74 E-value=2.5 Score=40.51 Aligned_cols=53 Identities=8% Similarity=0.054 Sum_probs=40.7
Q ss_pred ChHHHHHHHHHHH-cCcEEEcCCceeEEEEecCCCcEEEEEeC---------CC-----cEEEcCEEEEC
Q 009881 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLA---------SG-----QDILSHKLVLD 333 (523)
Q Consensus 279 ~eL~qal~r~~a~-~Gg~~~L~~~V~~I~~~~~~g~~~gV~l~---------~G-----~~i~A~~VI~~ 333 (523)
.++.+.+.+.+.. .|.++++++.|++|..+ ++++.+|++. +| .+++||.||..
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~--~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~A 186 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSS 186 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEE--TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEec--CCeEEEEEEeccccccccCccccCceEEEECCEEEEC
Confidence 5677777777665 69999999999999876 6677777753 32 57999999953
No 481
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=81.67 E-value=1.1 Score=43.74 Aligned_cols=32 Identities=16% Similarity=0.101 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~ 55 (523)
.|.|||+|..|.+.|..|++.|. +|.++|.+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 58999999999999999999998 999999875
No 482
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=81.64 E-value=1.5 Score=44.01 Aligned_cols=53 Identities=15% Similarity=0.126 Sum_probs=40.8
Q ss_pred cChHHHHHHHHHHHcCcEEEcCCceeEEEEecCCCcEEEEEe-CCCc--EEEcCEEEE
Q 009881 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL-ASGQ--DILSHKLVL 332 (523)
Q Consensus 278 ~~eL~qal~r~~a~~Gg~~~L~~~V~~I~~~~~~g~~~gV~l-~~G~--~i~A~~VI~ 332 (523)
..++.+.|.+.+...|.++++++.|++|..++ ++. +.|++ .+|+ +++||.||.
T Consensus 102 ~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~-~~~-~~v~~~~~g~~~~~~a~~vV~ 157 (394)
T 1k0i_A 102 QTEVTRDLMEAREACGATTVYQAAEVRLHDLQ-GER-PYVTFERDGERLRLDCDYIAG 157 (394)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCEEEEEECTT-SSS-CEEEEEETTEEEEEECSEEEE
T ss_pred hHHHHHHHHHHHHhcCCeEEeceeEEEEEEec-CCc-eEEEEecCCcEEEEEeCEEEE
Confidence 35677888888888899999999999997641 222 45666 6887 799999994
No 483
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=81.62 E-value=1.3 Score=43.07 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
...|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4579999999999999999999999999999874
No 484
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=81.60 E-value=1.2 Score=46.36 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..-|+|+|+|-.|..+|.+|++.|.+|++.|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4568999999999999999999999999999874
No 485
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=81.53 E-value=1.2 Score=47.59 Aligned_cols=34 Identities=15% Similarity=0.118 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
-.++|||.|--|..+|..|.+.|++|+++|++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 5799999999999999999999999999999875
No 486
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=81.42 E-value=1.2 Score=44.72 Aligned_cols=37 Identities=22% Similarity=0.214 Sum_probs=28.4
Q ss_pred CCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009881 17 PIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (523)
Q Consensus 17 ~l~~~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n 54 (523)
.++..++.|+|+|+|..|..+|..|++ .++|.+.+++
T Consensus 11 ~~~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~ 47 (365)
T 3abi_A 11 HIEGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVN 47 (365)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESC
T ss_pred cccCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcC
Confidence 455567889999999999999999986 4789988775
No 487
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=81.41 E-value=1.7 Score=41.22 Aligned_cols=43 Identities=16% Similarity=0.052 Sum_probs=30.5
Q ss_pred CCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 13 PPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 13 ~~~~~l~~~~~DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
|..++......-|+|.|+ |--|..+|..|++.|++|.+++++.
T Consensus 7 ~~~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 50 (278)
T 2bgk_A 7 PDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIAD 50 (278)
T ss_dssp ----CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCh
Confidence 333344444445788875 6789999999999999999998764
No 488
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=81.17 E-value=1.1 Score=41.59 Aligned_cols=34 Identities=9% Similarity=0.162 Sum_probs=30.3
Q ss_pred cccEEEEC-CChhHHHHHHHHhhCC-CeEEEeccCC
Q 009881 22 AFDLIVIG-TGLPESVISAAASASG-KSVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIG-aGl~GL~aA~~La~~G-~~VlvlE~n~ 55 (523)
...|+|.| +|.-|..+|..|++.| ++|.++.++.
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 35699999 6999999999999999 8999999874
No 489
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=81.15 E-value=1.5 Score=42.92 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=30.5
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 23 ~DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
..|+|.|+ |.-|..++..|.+.|++|.+++++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 35899997 99999999999999999999998753
No 490
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=81.00 E-value=1.4 Score=44.13 Aligned_cols=34 Identities=18% Similarity=0.090 Sum_probs=30.5
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 23 ~DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
..|+|.|+ |.-|..++..|.+.|++|.++.++..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~ 63 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS 63 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCc
Confidence 36899997 99999999999999999999998753
No 491
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=80.95 E-value=2.3 Score=46.14 Aligned_cols=35 Identities=34% Similarity=0.498 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
.+|||||||||++|+.||++|++.|.+|+++|++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 46999999999999999999999999999999984
No 492
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=80.91 E-value=1.5 Score=40.88 Aligned_cols=33 Identities=12% Similarity=0.240 Sum_probs=29.2
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 24 DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
-|+|.|+ |.-|..+|..|++.|++|.+++++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~ 36 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQA 36 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 3788886 89999999999999999999998753
No 493
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=80.82 E-value=1.5 Score=42.39 Aligned_cols=34 Identities=26% Similarity=0.366 Sum_probs=31.2
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCC
Q 009881 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (523)
Q Consensus 23 ~DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~~ 56 (523)
..|+|.|+ |.-|..++..|.+.|++|.++.++..
T Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 8 HRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 46999998 99999999999999999999998764
No 494
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=80.70 E-value=1.3 Score=43.67 Aligned_cols=32 Identities=19% Similarity=0.318 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009881 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (523)
Q Consensus 24 DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~ 55 (523)
.|.|||+|..|..+|..|++.|. +|.++|.+.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 58999999999999999999997 899999976
No 495
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=80.56 E-value=1.4 Score=43.64 Aligned_cols=34 Identities=12% Similarity=0.008 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009881 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~ 55 (523)
...|.|||+|..|..+|..|+..|. +|.++|.+.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 3579999999999999999999998 899999864
No 496
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=80.52 E-value=1.4 Score=43.26 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~ 55 (523)
..|.|||+|..|...|..|+..|. +|.++|.+.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 579999999999999999999886 899999873
No 497
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=80.51 E-value=1.3 Score=43.48 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009881 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La~~G~--~VlvlE~n~ 55 (523)
..|.|||+|..|...|..|+..|. .|.++|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 579999999999999999999999 999999986
No 498
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=80.50 E-value=1.5 Score=42.91 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=29.8
Q ss_pred ccEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 23 FDLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 23 ~DVIIIG-aGl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
..|+|.| +|.-|..++..|.+.|++|.+++++.
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 55 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERGDKVVGIDNFA 55 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4689998 69999999999999999999999864
No 499
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=80.49 E-value=1.6 Score=43.52 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=30.0
Q ss_pred cccEEEECC-ChhHHHHHHHHhhCCC--eEEEeccCC
Q 009881 22 AFDLIVIGT-GLPESVISAAASASGK--SVLHLDPNP 55 (523)
Q Consensus 22 ~~DVIIIGa-Gl~GL~aA~~La~~G~--~VlvlE~n~ 55 (523)
...|.|||+ |..|+++|..|+..|. +|.++|.+.
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 457999998 9999999999999995 899999853
No 500
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=80.46 E-value=2.3 Score=42.54 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=31.1
Q ss_pred CcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009881 21 TAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (523)
Q Consensus 21 ~~~DVIIIGa-Gl~GL~aA~~La~~G~~VlvlE~n~ 55 (523)
....|+|.|+ |.-|..++..|.++|++|.++.++.
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 63 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKK 63 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCC
Confidence 3356999998 9999999999999999999999875
Done!