Query 009882
Match_columns 523
No_of_seqs 333 out of 2359
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 15:06:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009882.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009882hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yuw_A Heat shock cognate 71 k 100.0 2.6E-88 8.7E-93 721.7 60.9 497 6-505 3-519 (554)
2 4b9q_A Chaperone protein DNAK; 100.0 3.1E-88 1.1E-92 727.6 60.0 487 7-505 2-516 (605)
3 2kho_A Heat shock protein 70; 100.0 5.7E-86 1.9E-90 710.0 52.1 486 8-505 3-516 (605)
4 3d2f_A Heat shock protein homo 100.0 5.2E-85 1.8E-89 707.2 55.5 490 9-505 4-533 (675)
5 2v7y_A Chaperone protein DNAK; 100.0 6.9E-80 2.4E-84 651.8 57.9 460 8-505 3-485 (509)
6 3i33_A Heat shock-related 70 k 100.0 4.8E-64 1.6E-68 518.1 45.0 367 6-373 22-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 7.7E-63 2.6E-67 507.7 44.8 362 7-372 18-394 (394)
8 4gni_A Putative heat shock pro 100.0 2.4E-61 8.1E-66 498.6 41.9 363 6-372 12-402 (409)
9 1dkg_D Molecular chaperone DNA 100.0 9.3E-60 3.2E-64 482.7 39.9 356 8-371 3-382 (383)
10 1jce_A ROD shape-determining p 100.0 6.4E-43 2.2E-47 352.4 24.2 305 7-372 3-327 (344)
11 2fsj_A Hypothetical protein TA 100.0 3.2E-30 1.1E-34 258.7 11.2 230 104-369 96-343 (346)
12 3h1q_A Ethanolamine utilizatio 100.0 4.1E-28 1.4E-32 236.0 19.9 203 106-368 70-272 (272)
13 1k8k_A ARP3, actin-like protei 99.9 3.2E-27 1.1E-31 243.9 17.8 228 128-370 107-387 (418)
14 2ych_A Competence protein PILM 99.9 3.2E-27 1.1E-31 240.7 16.9 299 6-351 12-335 (377)
15 2fxu_A Alpha-actin-1, actin, a 99.9 1.3E-26 4.5E-31 235.6 16.4 292 6-369 4-348 (375)
16 4a2a_A Cell division protein F 99.9 4.2E-26 1.4E-30 233.6 20.1 198 142-370 168-393 (419)
17 3dob_A Heat shock 70 kDa prote 99.9 7.5E-24 2.6E-28 184.5 16.9 123 384-506 2-129 (152)
18 3dqg_A Heat shock 70 kDa prote 99.9 7.3E-24 2.5E-28 184.3 16.8 123 384-506 2-128 (151)
19 3h0x_A 78 kDa glucose-regulate 99.9 1.3E-23 4.6E-28 183.2 16.4 123 384-506 2-129 (152)
20 3n8e_A Stress-70 protein, mito 99.9 3.9E-23 1.3E-27 184.9 16.0 128 379-506 17-148 (182)
21 4e81_A Chaperone protein DNAK; 99.9 4.7E-23 1.6E-27 190.8 16.7 123 383-505 2-128 (219)
22 2zgy_A Plasmid segregation pro 99.9 4.3E-24 1.5E-28 212.3 7.3 227 102-368 73-319 (320)
23 1q5l_A Chaperone protein DNAK; 99.9 1.2E-22 4.1E-27 173.5 12.4 119 379-497 14-132 (135)
24 2op6_A Heat shock 70 kDa prote 99.9 5.8E-22 2E-26 174.0 17.0 122 384-505 2-128 (152)
25 1u00_A HSC66, chaperone protei 99.8 2.2E-20 7.4E-25 174.8 16.8 120 385-504 1-124 (227)
26 1k8k_B ARP2, actin-like protei 99.8 7.2E-22 2.5E-26 201.7 6.3 214 130-370 106-364 (394)
27 3js6_A Uncharacterized PARM pr 99.8 5.9E-20 2E-24 184.1 11.9 206 129-372 114-338 (355)
28 4ehu_A Activator of 2-hydroxyi 99.8 5E-18 1.7E-22 165.0 19.3 217 105-372 35-256 (276)
29 4apw_A ALP12; actin-like prote 99.7 3.1E-19 1.1E-23 177.4 4.0 205 129-372 106-326 (329)
30 3dwl_A Actin-related protein 3 99.7 1.2E-16 4.2E-21 163.5 8.6 243 107-369 103-395 (427)
31 3qb0_A Actin-related protein 4 99.7 1.1E-15 3.7E-20 158.1 15.7 174 5-234 21-209 (498)
32 4fo0_A Actin-related protein 8 99.4 5E-12 1.7E-16 136.0 22.2 118 105-235 170-294 (593)
33 2d0o_A DIOL dehydratase-reacti 99.4 5.5E-12 1.9E-16 127.5 13.8 197 141-369 367-603 (610)
34 1nbw_A Glycerol dehydratase re 99.3 4.4E-12 1.5E-16 128.7 12.8 195 143-369 371-605 (607)
35 1hux_A Activator of (R)-2-hydr 98.9 1E-08 3.6E-13 98.4 14.5 171 159-371 77-257 (270)
36 4am6_A Actin-like protein ARP8 98.2 3.5E-06 1.2E-10 88.3 9.7 123 129-268 222-346 (655)
37 2ews_A Pantothenate kinase; PA 97.8 0.00023 7.7E-09 68.1 12.8 47 322-368 237-286 (287)
38 2i7n_A Pantothenate kinase 1; 97.7 0.00032 1.1E-08 68.9 13.2 152 185-368 176-358 (360)
39 1t6c_A Exopolyphosphatase; alp 97.3 0.00051 1.7E-08 67.0 8.2 79 144-229 100-178 (315)
40 2e2o_A Hexokinase; acetate and 97.2 0.15 5.2E-06 48.8 24.9 50 321-371 239-288 (299)
41 3vgl_A Glucokinase; ROK family 97.2 0.025 8.6E-07 55.1 19.4 89 104-202 36-140 (321)
42 4db3_A Glcnac kinase, N-acetyl 97.1 0.12 4.1E-06 50.4 23.4 47 322-368 270-324 (327)
43 3r8e_A Hypothetical sugar kina 97.0 0.018 6.1E-07 56.2 15.6 48 322-369 261-318 (321)
44 2ch5_A NAGK protein; transfera 96.9 0.35 1.2E-05 47.3 27.7 83 104-195 44-132 (347)
45 3l0q_A Xylulose kinase; xlylul 96.7 0.0041 1.4E-07 65.7 9.3 84 288-373 409-492 (554)
46 2itm_A Xylulose kinase, xylulo 96.7 0.0034 1.2E-07 65.2 8.3 76 297-373 362-437 (484)
47 4bc3_A Xylulose kinase; transf 96.6 0.0056 1.9E-07 64.4 9.4 78 294-373 407-484 (538)
48 2zf5_O Glycerol kinase; hypert 96.6 0.0052 1.8E-07 64.0 9.1 75 296-373 369-443 (497)
49 2gup_A ROK family protein; sug 96.6 0.27 9.2E-06 46.9 20.5 49 322-370 228-287 (292)
50 3ll3_A Gluconate kinase; xylul 96.5 0.0067 2.3E-07 63.2 8.9 51 321-373 393-443 (504)
51 3i8b_A Xylulose kinase; strain 96.4 0.0049 1.7E-07 64.4 7.7 51 321-373 424-474 (515)
52 3vov_A Glucokinase, hexokinase 96.4 0.73 2.5E-05 44.1 22.9 49 322-370 238-295 (302)
53 2qm1_A Glucokinase; alpha-beta 96.4 0.22 7.6E-06 48.3 19.0 48 322-369 263-320 (326)
54 3hz6_A Xylulokinase; xylulose, 96.4 0.0082 2.8E-07 62.7 8.9 78 289-373 375-453 (511)
55 3mdq_A Exopolyphosphatase; str 96.2 0.065 2.2E-06 52.0 14.0 79 144-228 92-170 (315)
56 3ezw_A Glycerol kinase; glycer 96.2 0.012 4E-07 61.7 9.2 51 321-373 402-452 (526)
57 3g25_A Glycerol kinase; IDP007 96.2 0.0086 2.9E-07 62.4 7.9 51 321-373 404-454 (501)
58 3cer_A Possible exopolyphospha 96.2 0.014 4.7E-07 57.5 8.9 82 144-228 105-191 (343)
59 3ifr_A Carbohydrate kinase, FG 96.2 0.014 4.8E-07 60.8 9.5 51 321-373 400-450 (508)
60 2ap1_A Putative regulator prot 96.2 0.21 7.2E-06 48.5 17.5 67 128-201 81-163 (327)
61 3jvp_A Ribulokinase; PSI-II, N 96.2 0.0087 3E-07 63.4 7.9 80 289-373 410-490 (572)
62 2dpn_A Glycerol kinase; thermu 96.1 0.015 5.1E-07 60.5 9.2 75 297-373 373-448 (495)
63 4e1j_A Glycerol kinase; struct 96.1 0.0074 2.5E-07 63.2 6.7 51 321-373 425-475 (520)
64 2p3r_A Glycerol kinase; glycer 96.0 0.0093 3.2E-07 62.2 7.2 51 321-373 401-451 (510)
65 3h3n_X Glycerol kinase; ATP-bi 96.0 0.01 3.6E-07 61.8 7.6 51 321-373 403-453 (506)
66 1z6r_A MLC protein; transcript 95.8 0.37 1.3E-05 48.3 17.9 49 322-370 335-393 (406)
67 2d4w_A Glycerol kinase; alpha 95.8 0.029 1E-06 58.4 9.6 51 321-373 403-453 (504)
68 2w40_A Glycerol kinase, putati 95.7 0.015 5E-07 60.7 7.1 50 322-373 407-457 (503)
69 2hoe_A N-acetylglucosamine kin 95.5 1.3 4.5E-05 43.9 20.2 89 104-201 123-229 (380)
70 1z05_A Transcriptional regulat 95.5 0.88 3E-05 46.0 19.2 91 104-201 143-251 (429)
71 3zyy_X Iron-sulfur cluster bin 95.4 0.26 8.8E-06 52.0 15.1 82 285-367 499-581 (631)
72 2uyt_A Rhamnulokinase; rhamnos 95.4 0.024 8.3E-07 58.7 7.2 47 321-370 393-439 (489)
73 1zc6_A Probable N-acetylglucos 95.3 2.1 7.2E-05 40.9 22.1 63 297-369 228-292 (305)
74 1u6z_A Exopolyphosphatase; alp 95.3 0.034 1.2E-06 57.8 7.9 77 145-228 100-176 (513)
75 2ivn_A O-sialoglycoprotein end 94.7 3.3 0.00011 40.1 28.3 51 322-372 245-300 (330)
76 3h6e_A Carbohydrate kinase, FG 93.7 0.092 3.1E-06 54.2 6.7 71 294-370 362-435 (482)
77 3bex_A Type III pantothenate k 91.6 0.49 1.7E-05 44.0 8.0 17 8-24 4-20 (249)
78 3qbx_A Anhydro-N-acetylmuramic 91.3 0.62 2.1E-05 45.6 8.5 74 296-372 261-338 (371)
79 3en9_A Glycoprotease, O-sialog 91.2 5 0.00017 41.7 16.2 204 127-365 72-297 (540)
80 3djc_A Type III pantothenate k 90.8 1.5 5E-05 41.1 10.5 17 8-24 3-19 (266)
81 3hi0_A Putative exopolyphospha 89.6 0.29 9.9E-06 50.7 5.0 76 144-227 103-178 (508)
82 3cqy_A Anhydro-N-acetylmuramic 89.3 1.1 3.6E-05 44.0 8.4 74 295-372 267-344 (370)
83 3eno_A Putative O-sialoglycopr 88.5 1.4 4.9E-05 42.8 8.8 68 301-373 234-306 (334)
84 3ttc_A HYPF, transcriptional r 87.1 1.8 6.1E-05 45.9 8.9 50 321-370 599-651 (657)
85 3vth_A Hydrogenase maturation 85.4 1.6 5.6E-05 47.2 7.8 51 322-372 694-749 (761)
86 3o8m_A Hexokinase; rnaseh-like 84.4 5.3 0.00018 40.8 10.6 94 104-203 122-243 (485)
87 4g9i_A Hydrogenase maturation 84.3 1.9 6.3E-05 46.9 7.6 51 321-371 705-760 (772)
88 3hm8_A Hexokinase-3; glucose, 80.3 13 0.00045 37.3 11.6 55 142-202 161-218 (445)
89 3ven_A O-carbamoyltransferase 80.0 5.1 0.00017 41.7 8.7 64 305-373 296-360 (576)
90 2yhx_A Hexokinase B; transfera 78.7 6.8 0.00023 39.7 9.0 93 104-202 103-220 (457)
91 3aap_A Ectonucleoside triphosp 78.5 2.4 8.2E-05 41.5 5.5 46 155-202 108-158 (353)
92 3ifr_A Carbohydrate kinase, FG 78.2 0.91 3.1E-05 47.0 2.5 24 1-24 1-24 (508)
93 4e1j_A Glycerol kinase; struct 76.6 1.4 4.8E-05 45.8 3.3 24 1-24 20-43 (520)
94 4htl_A Beta-glucoside kinase; 75.9 8.7 0.0003 36.3 8.6 50 322-371 238-292 (297)
95 3h6e_A Carbohydrate kinase, FG 73.8 1.3 4.5E-05 45.5 2.2 23 1-24 1-23 (482)
96 3epq_A Putative fructokinase; 73.7 15 0.0005 34.9 9.5 44 154-201 97-140 (302)
97 2aa4_A Mannac kinase, putative 72.9 7.3 0.00025 36.5 7.2 48 322-369 234-287 (289)
98 3f9m_A Glucokinase; hexokinase 71.6 28 0.00096 35.2 11.3 91 104-200 123-240 (470)
99 3cj1_A Ectonucleoside triphosp 68.6 6.7 0.00023 39.7 6.0 20 183-202 189-208 (456)
100 2yhw_A Bifunctional UDP-N-acet 68.5 37 0.0013 32.5 11.4 44 154-201 131-174 (343)
101 1nu0_A Hypothetical protein YQ 65.7 3.7 0.00013 34.1 2.8 17 8-24 4-20 (138)
102 1iv0_A Hypothetical protein; r 65.7 3.6 0.00012 31.9 2.6 16 9-24 3-18 (98)
103 3ll3_A Gluconate kinase; xylul 64.9 2.8 9.5E-05 43.3 2.4 19 6-24 3-21 (504)
104 3htv_A D-allose kinase, alloki 64.9 26 0.00088 33.2 9.2 50 321-370 239-299 (310)
105 2uyt_A Rhamnulokinase; rhamnos 64.7 2.8 9.7E-05 43.0 2.4 19 6-24 3-21 (489)
106 3l0q_A Xylulose kinase; xlylul 64.6 3 0.0001 43.6 2.6 19 6-24 4-22 (554)
107 3i8b_A Xylulose kinase; strain 64.4 3.3 0.00011 42.8 2.9 19 6-24 4-22 (515)
108 1zbs_A Hypothetical protein PG 63.1 50 0.0017 30.8 10.8 66 297-370 212-280 (291)
109 3h3n_X Glycerol kinase; ATP-bi 62.9 3.7 0.00013 42.3 2.9 19 6-24 4-22 (506)
110 1cza_N Hexokinase type I; stru 62.6 84 0.0029 34.8 13.9 57 140-202 630-689 (917)
111 3ezw_A Glycerol kinase; glycer 62.0 3.6 0.00012 42.7 2.6 19 6-24 3-21 (526)
112 1zbs_A Hypothetical protein PG 61.7 9 0.00031 36.1 5.2 61 127-196 59-121 (291)
113 1saz_A Probable butyrate kinas 61.3 17 0.00057 35.8 7.3 49 321-369 295-347 (381)
114 3hz6_A Xylulokinase; xylulose, 61.0 4.2 0.00014 42.0 2.9 19 6-24 4-22 (511)
115 3jvp_A Ribulokinase; PSI-II, N 60.9 3.7 0.00013 43.1 2.5 19 6-24 4-22 (572)
116 1cza_N Hexokinase type I; stru 59.6 66 0.0022 35.7 12.3 55 142-202 184-241 (917)
117 2p3r_A Glycerol kinase; glycer 59.4 4.5 0.00015 41.8 2.8 19 6-24 2-20 (510)
118 3cet_A Conserved archaeal prot 58.4 5.9 0.0002 38.1 3.2 71 289-367 244-321 (334)
119 4bc3_A Xylulose kinase; transf 58.3 4.4 0.00015 42.2 2.5 19 6-24 9-27 (538)
120 3o8m_A Hexokinase; rnaseh-like 56.6 35 0.0012 34.7 8.7 53 182-234 78-136 (485)
121 2dpn_A Glycerol kinase; thermu 55.4 5.7 0.00019 40.8 2.7 18 7-24 2-19 (495)
122 3zx3_A Ectonucleoside triphosp 55.1 15 0.00051 37.0 5.7 45 157-202 150-199 (452)
123 1vhx_A Putative holliday junct 54.8 5.9 0.0002 33.4 2.3 17 8-24 4-20 (150)
124 2yhx_A Hexokinase B; transfera 53.0 64 0.0022 32.5 10.0 53 182-234 59-117 (457)
125 2zf5_O Glycerol kinase; hypert 52.1 7 0.00024 40.1 2.8 18 7-24 3-20 (497)
126 2w40_A Glycerol kinase, putati 51.9 6 0.00021 40.7 2.3 18 7-24 4-21 (503)
127 3epq_A Putative fructokinase; 50.5 30 0.001 32.6 6.8 50 321-370 224-289 (302)
128 2q2r_A Glucokinase 1, putative 50.5 29 0.00099 33.8 6.9 20 6-25 28-47 (373)
129 3g25_A Glycerol kinase; IDP007 50.1 8.2 0.00028 39.6 2.9 18 7-24 6-23 (501)
130 2ews_A Pantothenate kinase; PA 50.1 8.4 0.00029 36.3 2.7 21 4-24 17-37 (287)
131 2yhw_A Bifunctional UDP-N-acet 49.9 62 0.0021 30.9 9.2 18 7-24 30-47 (343)
132 2itm_A Xylulose kinase, xylulo 44.8 11 0.00036 38.6 2.7 16 9-24 2-17 (484)
133 1zxo_A Conserved hypothetical 43.3 2.8 9.5E-05 39.7 -1.8 64 299-369 212-277 (291)
134 1msz_A DNA-binding protein smu 42.9 20 0.00068 26.9 3.2 28 131-158 34-61 (86)
135 1hjr_A Holliday junction resol 42.4 14 0.00049 31.3 2.8 17 8-24 2-18 (158)
136 2d4w_A Glycerol kinase; alpha 42.3 11 0.00038 38.6 2.5 17 8-24 3-19 (504)
137 4ep4_A Crossover junction endo 40.9 16 0.00053 31.3 2.8 17 8-24 2-18 (166)
138 3fcg_A F1 capsule-anchoring pr 40.2 66 0.0022 24.3 5.8 55 427-495 25-79 (90)
139 4am6_A Actin-like protein ARP8 39.8 13 0.00045 39.0 2.5 47 299-345 476-524 (655)
140 3f9m_A Glucokinase; hexokinase 36.6 1E+02 0.0035 31.1 8.4 26 182-207 75-100 (470)
141 3zyy_X Iron-sulfur cluster bin 36.4 1.1E+02 0.0039 32.0 9.0 99 184-338 206-306 (631)
142 1g99_A Acetate kinase; alpha/b 34.6 52 0.0018 32.5 5.7 45 297-345 302-347 (408)
143 1sz2_A Glucokinase, glucose ki 33.8 79 0.0027 30.0 7.0 50 152-202 99-156 (332)
144 3cet_A Conserved archaeal prot 33.6 42 0.0014 32.1 4.7 37 160-202 109-145 (334)
145 1hnj_A Beta-ketoacyl-acyl carr 33.5 56 0.0019 30.7 5.8 48 296-346 212-259 (317)
146 4h0o_A Acetate kinase; askha ( 32.5 3.7E+02 0.013 26.3 12.5 46 296-345 305-351 (404)
147 1bdg_A Hexokinase; phosphotran 32.3 1.5E+02 0.0052 29.6 9.0 23 183-205 67-89 (451)
148 1nbw_A Glycerol dehydratase re 31.8 22 0.00074 36.7 2.5 43 130-172 132-175 (607)
149 3hm8_A Hexokinase-3; glucose, 31.4 1.5E+02 0.005 29.7 8.5 30 182-212 57-86 (445)
150 1mzj_A Beta-ketoacylsynthase I 28.5 71 0.0024 30.4 5.6 44 299-345 228-271 (339)
151 1ub7_A 3-oxoacyl-[acyl-carrier 28.2 74 0.0025 30.0 5.6 46 298-346 216-261 (322)
152 2x3e_A 3-oxoacyl-[acyl-carrier 28.0 77 0.0026 30.0 5.7 45 299-346 221-265 (331)
153 2e1z_A Propionate kinase; TDCD 27.9 56 0.0019 32.3 4.6 26 320-345 329-355 (415)
154 1zow_A 3-oxoacyl-[acyl-carrier 27.1 88 0.003 29.2 6.0 47 297-346 207-253 (313)
155 1zxo_A Conserved hypothetical 26.4 25 0.00085 32.9 1.8 59 128-195 58-118 (291)
156 1woq_A Inorganic polyphosphate 26.2 59 0.002 29.8 4.4 47 322-371 215-262 (267)
157 2ebd_A 3-oxoacyl-[acyl-carrier 26.0 78 0.0027 29.5 5.3 45 299-346 207-251 (309)
158 2h3g_X Biosynthetic protein; p 24.7 39 0.0013 31.3 2.7 71 290-370 182-252 (268)
159 3htv_A D-allose kinase, alloki 23.5 33 0.0011 32.5 2.1 44 153-201 106-149 (310)
160 1bdg_A Hexokinase; phosphotran 23.3 58 0.002 32.7 3.9 57 140-202 171-229 (451)
161 2iir_A Acetate kinase; transfe 23.2 1.2E+02 0.004 29.9 5.9 46 297-346 302-348 (403)
162 2qm1_A Glucokinase; alpha-beta 23.1 1.9E+02 0.0066 26.9 7.6 27 184-210 6-32 (326)
163 2ap1_A Putative regulator prot 23.0 1.8E+02 0.0063 27.2 7.4 51 183-234 23-73 (327)
164 3mcp_A Glucokinase; structural 22.4 54 0.0019 31.9 3.4 48 153-202 107-165 (366)
165 1sz2_A Glucokinase, glucose ki 21.5 40 0.0014 32.2 2.2 19 6-24 13-31 (332)
166 4ijn_A Acetate kinase, acetoki 21.0 1.1E+02 0.0036 30.1 5.1 45 297-345 303-348 (398)
167 1u6e_A 3-oxoacyl-[acyl-carrier 20.8 1.3E+02 0.0044 28.4 5.8 44 299-345 229-272 (335)
168 2f9w_A Pantothenate kinase; CO 20.6 51 0.0017 30.6 2.6 19 6-24 22-40 (271)
No 1
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=2.6e-88 Score=721.68 Aligned_cols=497 Identities=80% Similarity=1.198 Sum_probs=467.0
Q ss_pred CCCEEEEEccccceEEEEE---------------ecceEEEEcCCceEecHhhHhhhhhCcCchhhhchhhcCCCCCChh
Q 009882 6 EGPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDAS 70 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~---------------~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 70 (523)
+..+||||||||||+||++ .+||+|+|.++++++|..|+.+...+|.++++++||++|+.++++.
T Consensus 3 m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 82 (554)
T 1yuw_A 3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAV 82 (554)
T ss_dssp SCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSH
T ss_pred CCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHH
Confidence 5568999999999999998 6899999999999999999999999999999999999999999999
Q ss_pred hhccccccCeEEEecCCCCceEEEEEcCCceeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHH
Q 009882 71 VQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDA 150 (523)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 150 (523)
++...+.+||++.. .++.+.+.+.+.+....++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|
T Consensus 83 v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A 161 (554)
T 1yuw_A 83 VQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDA 161 (554)
T ss_dssp HHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 99999999999985 47788888888888889999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHH
Q 009882 151 GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVN 230 (523)
Q Consensus 151 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~ 230 (523)
++.||++++++++||+|||++|+..... ..+.++||||+||||||++++++.++.++++++.++..+||++||+.|++
T Consensus 162 ~~~AGl~~~~li~EP~AAAlay~~~~~~--~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~ 239 (554)
T 1yuw_A 162 GTIAGLNVLRIINEPTAAAIAYGLDKKV--GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVN 239 (554)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTCSTTC--SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHHcCCCeEEEeCcHHHHHHHHHhhccC--CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999876532 24678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCceeEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHH
Q 009882 231 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEK 310 (523)
Q Consensus 231 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~ 310 (523)
++.++|.++++.++..+++.+.+|+.+||++|+.||......+.++.+.+|.++...|+|++|+++++++++++.+.|++
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~ 319 (554)
T 1yuw_A 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEK 319 (554)
T ss_dssp HHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHH
T ss_pred HHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888889999999999999999999999999999998888999999999999999999999999999999
Q ss_pred HHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhCCCCccccceEeeecccC
Q 009882 311 CLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPL 390 (523)
Q Consensus 311 ~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~~~~~~~~~~~~~~~~~~ 390 (523)
+|+++++...+|+.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.+++...++.+++.+.|++|+
T Consensus 320 ~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~ 399 (554)
T 1yuw_A 320 ALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPL 399 (554)
T ss_dssp HHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSS
T ss_pred HHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeee
Confidence 99999999889999999999999999999999999778888899999999999999999998754455678899999999
Q ss_pred ccceEeeCCEEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCccccccCcceeEEEEeCCCCCCCCcceEEEEEE
Q 009882 391 SLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFD 470 (523)
Q Consensus 391 s~gi~~~~~~~~~ii~~~~~lP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~~~~~~~~~~~i~v~~~ 470 (523)
+||+++.++.+.++|+||+++|++++..|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|+.++|.++|+++|+
T Consensus 400 slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~ 479 (554)
T 1yuw_A 400 SLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFD 479 (554)
T ss_dssp CEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEE
T ss_pred EEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCceEEEEEEEcCCCceeeEEcC-----CchhhHHHHH
Q 009882 471 IDANGILNVSAEDKTTAKRTRSQSP-----TTRVDCQRMK 505 (523)
Q Consensus 471 ~d~~g~l~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 505 (523)
+|.||+|+|++.+..+|++..+++. ++.++++++.
T Consensus 480 id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~ 519 (554)
T 1yuw_A 480 IDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMV 519 (554)
T ss_dssp ECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHH
T ss_pred EccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHH
Confidence 9999999999999999999877764 5778888774
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=3.1e-88 Score=727.56 Aligned_cols=487 Identities=55% Similarity=0.865 Sum_probs=456.4
Q ss_pred CCEEEEEccccceEEEEE---------------ecceEEEEc-CCceEecHhhHhhhhhCcCchhhhchhhcCCCCCChh
Q 009882 7 GPAIGIDLGTTYSCVGVW---------------TTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDAS 70 (523)
Q Consensus 7 ~~vvGID~GTt~s~va~~---------------~~Ps~v~~~-~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 70 (523)
+.+||||||||||+||++ .+||+|+|. ++++++|..|+.+...+|.++++++||++|+.++++.
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 81 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHH
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHH
Confidence 468999999999999998 689999997 4579999999999999999999999999999999999
Q ss_pred hhccccccCeEEEecCCCCceEEEEEcCCceeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHH
Q 009882 71 VQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDA 150 (523)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 150 (523)
++.+.+.+||++....++.+.+.+ .+..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~~~~----~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~A 157 (605)
T 4b9q_A 82 VQRDVSIMPFKIIAADNGDAWVEV----KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHTTCSSEEEECTTSBEEEEE----TTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCceEEEE----CCEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 999999999999988887766654 2468999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeC----CeEEEEEecCCCCCchHHHHH
Q 009882 151 GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDN 226 (523)
Q Consensus 151 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~----~~~~v~~~~~~~~lGG~~id~ 226 (523)
++.|||+++++++||+|||++|+..... .+++++|||+||||||++++++.+ +.++++++.++..+||++||+
T Consensus 158 a~~AGl~v~~li~EP~AAAlaygl~~~~---~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~ 234 (605)
T 4b9q_A 158 GRIAGLEVKRIINEPTAAALAYGLDKGT---GNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (605)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHTTSCC---SSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHH
T ss_pred HHHcCCceEEEeCcHHHHHHHhhhhccC---CCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHH
Confidence 9999999999999999999999876542 568999999999999999999988 899999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCceeEEEEecccCC----eeeEEEEcHHHHHHHHHHHHH
Q 009882 227 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG----IDFYSTITRARFEELNMDLFR 302 (523)
Q Consensus 227 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~~~i~~~~~~----~~~~~~itr~~~e~~~~~~~~ 302 (523)
+|++|+.++|+++++.++..+++.+.+|+.+||++|+.||......+.++.+..+ .++...|||++|+++++++++
T Consensus 235 ~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~ 314 (605)
T 4b9q_A 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (605)
T ss_dssp HHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHH
Confidence 9999999999999999888899999999999999999999999998888765533 678899999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhCCCCccccce
Q 009882 303 KCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDL 382 (523)
Q Consensus 303 ~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~~~~~~~~~~ 382 (523)
++...++++|+.+++...+|+.|+||||+|++|+|++.|++.| +.++....||++|||+|||++|+.+++. .+++
T Consensus 315 ~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~ 389 (605)
T 4b9q_A 315 RSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDV 389 (605)
T ss_dssp HTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSE
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCce
Confidence 9999999999999999999999999999999999999999999 6778888999999999999999999864 5688
Q ss_pred EeeecccCccceEeeCCEEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCccccccCcceeEEEEeCCCCCCCCc
Q 009882 383 LLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGV 462 (523)
Q Consensus 383 ~~~~~~~~s~gi~~~~~~~~~ii~~~~~lP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~~~~~~~~~ 462 (523)
.+.|++|++||+++.+|.+.+||+||+++|++++..|++..|||+.+.|.+|||++..+.+|+.||+|.|.++|+.++|.
T Consensus 390 ~l~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~ 469 (605)
T 4b9q_A 390 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 469 (605)
T ss_dssp EEECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred EEEeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEecCCceEEEEEEEcCCCceeeEEcC----CchhhHHHHH
Q 009882 463 PQITVCFDIDANGILNVSAEDKTTAKRTRSQSP----TTRVDCQRMK 505 (523)
Q Consensus 463 ~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~----~~~~~~~~~~ 505 (523)
++|+|+|++|.||+|+|++.+..||++.++++. ++.+|++++.
T Consensus 470 ~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~~~ls~~ei~~~~ 516 (605)
T 4b9q_A 470 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMV 516 (605)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTCCEECCEEESCCSCCHHHHHHHH
T ss_pred ceEEEEEEEcCCcEEEEEEEecCCCcEEEEEecCCCCCCHHHHHHHH
Confidence 999999999999999999999999999876653 5888998774
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=5.7e-86 Score=709.99 Aligned_cols=486 Identities=55% Similarity=0.874 Sum_probs=451.0
Q ss_pred CEEEEEccccceEEEEE---------------ecceEEEEc-CCceEecHhhHhhhhhCcCchhhhchhhcCCCCCChhh
Q 009882 8 PAIGIDLGTTYSCVGVW---------------TTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASV 71 (523)
Q Consensus 8 ~vvGID~GTt~s~va~~---------------~~Ps~v~~~-~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 71 (523)
.+||||||||||+||++ .+||+|+|. ++++++|..|+.+...+|.++++++||++|+.++++.+
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 48999999999999998 589999995 56799999999999999999999999999999999989
Q ss_pred hccccccCeEEEecCCCCceEEEEEcCCceeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHH
Q 009882 72 QGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAG 151 (523)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A~ 151 (523)
+.+.+.+||++..+.++.+.+.+ . +..++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~--~--g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~ 158 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEV--K--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEE--T--TEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEECCCCceEEEE--C--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHH
Confidence 98888899999887887766655 3 3689999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEe----CCeEEEEEecCCCCCchHHHHHH
Q 009882 152 VIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNR 227 (523)
Q Consensus 152 ~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~----~~~~~v~~~~~~~~lGG~~id~~ 227 (523)
+.||++++++++||+|||++|+.... ..+.++||||+||||||+|++++. ++.++++++.++..+||++||+.
T Consensus 159 ~~AGl~v~~li~EP~AAAlay~l~~~---~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~ 235 (605)
T 2kho_A 159 RIAGLEVKRIINEPTAAALAYGLDKG---TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSR 235 (605)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTTTSS---SSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHH
T ss_pred HHcCCceEEEecCHHHHHHHhhhccc---CCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHH
Confidence 99999999999999999999987653 156789999999999999999998 78999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCceeEEEEecccC---C-eeeEEEEcHHHHHHHHHHHHHH
Q 009882 228 MVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYE---G-IDFYSTITRARFEELNMDLFRK 303 (523)
Q Consensus 228 l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~~~i~~~~~---~-~~~~~~itr~~~e~~~~~~~~~ 303 (523)
|++++.++|+++++.++..+++.+.+|+.+||++|+.||......+.++.+.+ | .++...|||++|++++++++++
T Consensus 236 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~ 315 (605)
T 2kho_A 236 LINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNR 315 (605)
T ss_dssp HHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGG
T ss_pred HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHH
Confidence 99999999999999898889999999999999999999999988888886654 2 5677899999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhCCCCccccceE
Q 009882 304 CMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLL 383 (523)
Q Consensus 304 ~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~~~~~~~~~~~ 383 (523)
+.+.|+++|+.+++...+|+.|+||||+|++|+|++.|++.| +.++....||++|||+|||++|+.+++. .+++.
T Consensus 316 i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~~----~~~~~ 390 (605)
T 2kho_A 316 SIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVL 390 (605)
T ss_dssp GTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTTS----CCCCC
T ss_pred HHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcCC----ccCce
Confidence 999999999999998889999999999999999999999999 5678889999999999999999988853 46788
Q ss_pred eeecccCccceEeeCCEEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCccccccCcceeEEEEeCCCCCCCCcc
Q 009882 384 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 463 (523)
Q Consensus 384 ~~~~~~~s~gi~~~~~~~~~ii~~~~~lP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~~~~~~~~~~ 463 (523)
+.|++|++||+++.++.+.++|+||+++|++++..|++..|+|+.+.|.+|||++..+.+|+.||+|.|.++|+.++|.+
T Consensus 391 l~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~ 470 (605)
T 2kho_A 391 LLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMP 470 (605)
T ss_dssp CSBCCCCCEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCS
T ss_pred EEeeeeeeccccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCceEEEEEEEcCCCceeeEEcC----CchhhHHHHH
Q 009882 464 QITVCFDIDANGILNVSAEDKTTAKRTRSQSP----TTRVDCQRMK 505 (523)
Q Consensus 464 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~----~~~~~~~~~~ 505 (523)
+|+++|++|.||+|+|++.+..||++..+++. ++.++++++.
T Consensus 471 ~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~~~ls~~~i~~~~ 516 (605)
T 2kho_A 471 QIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMV 516 (605)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECTTSSCCHHHHHHHH
T ss_pred EEEEEEEEcCCCceeEEEEEcCCCceeecccccccCCCHHHHHHHH
Confidence 99999999999999999999999999888774 5788888764
No 4
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=5.2e-85 Score=707.17 Aligned_cols=490 Identities=29% Similarity=0.485 Sum_probs=449.7
Q ss_pred EEEEEccccceEEEEE---------------ecceEEEEcCCceEecHhhHhhhhhCcCchhhhchhhcCCCCCChhhhc
Q 009882 9 AIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQG 73 (523)
Q Consensus 9 vvGID~GTt~s~va~~---------------~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~ 73 (523)
+||||||||||+||++ .+||+|+|.++++++|..|+.+...+|.++++++||++|+.++++.++.
T Consensus 4 ~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~~ 83 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQ 83 (675)
T ss_dssp CEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTHHH
T ss_pred EEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHHHH
Confidence 8999999999999997 5799999999999999999999999999999999999999999999999
Q ss_pred cccccCeEEEecCCCCceEEEEEcCCceeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHHH
Q 009882 74 DMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVI 153 (523)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A~~~ 153 (523)
+.+.+||++....++.+.+.+.+.++...++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++.
T Consensus 84 ~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~ 163 (675)
T 3d2f_A 84 ESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARI 163 (675)
T ss_dssp HHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999998888888888888887788999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeeeechhHHHHHhcccccccCC---CCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHH
Q 009882 154 AGLNVMRIINEPTAAAIAYGLDKKATS---VGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVN 230 (523)
Q Consensus 154 aGl~~~~li~Ep~Aaa~~~~~~~~~~~---~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~ 230 (523)
||++++++++||+|||++|++...... ..+.++||||+||||||+|++++.++.++++++.++..+||++||+.|++
T Consensus 164 AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~~ 243 (675)
T 3d2f_A 164 AGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITE 243 (675)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred cCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHHH
Confidence 999999999999999999987543111 35789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCceeEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHH
Q 009882 231 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEK 310 (523)
Q Consensus 231 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~ 310 (523)
++.++|.++++.++..+++.+.+|+.+||++|+.||.+....+.++.+.+|.++...|||++|++++.++++++..+|++
T Consensus 244 ~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~~ 323 (675)
T 3d2f_A 244 HFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTK 323 (675)
T ss_dssp HHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHHH
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888889999999999999999999999888899998888889999999999999999999999999999
Q ss_pred HHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhCCCCccccceEeeecccC
Q 009882 311 CLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPL 390 (523)
Q Consensus 311 ~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~~~~~~~~~~~~~~~~~~ 390 (523)
+|+.+++...+|+.|+|+||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.+++ .++++++.+.|++|+
T Consensus 324 ~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~--~~~v~~~~l~Dv~p~ 400 (675)
T 3d2f_A 324 ALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSP--TLRVRPFKFEDIHPY 400 (675)
T ss_dssp HHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCS--SCCCCCCEEEEEECS
T ss_pred HHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCC--CCcccceEEEeeeec
Confidence 99999999889999999999999999999999999 567888899999999999999999985 345678999999999
Q ss_pred ccceEeeCC----EEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEE-EecCccccc-cCcceeEEEEeCCCCCCCCcc-
Q 009882 391 SLGLETAGG----VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQV-YEGERTRTR-DNNLLGKFELSGIPPAPRGVP- 463 (523)
Q Consensus 391 s~gi~~~~~----~~~~ii~~~~~lP~~~~~~~~~~~~~q~~~~i~i-~~g~~~~~~-~~~~ig~~~i~~~~~~~~~~~- 463 (523)
+||+++.++ .+.+||+||++||++++.+|++..++ .+.+ |+|++..+. +|..||+|.|.|+|+.+.|.+
T Consensus 401 slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~----~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~ 476 (675)
T 3d2f_A 401 SVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDF----SMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSV 476 (675)
T ss_dssp CEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCE----EEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSCE
T ss_pred ceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCc----eEEEEEcCCcccccccCceeeEEEecCcCCCCCCCcc
Confidence 999999876 49999999999999999999876554 3444 779888887 899999999999999998874
Q ss_pred eEEEEEEecCCceEEEEEE----------EcCCCceeeEEc-----CCchhhHHHHH
Q 009882 464 QITVCFDIDANGILNVSAE----------DKTTAKRTRSQS-----PTTRVDCQRMK 505 (523)
Q Consensus 464 ~i~v~~~~d~~g~l~v~~~----------~~~~~~~~~~~~-----~~~~~~~~~~~ 505 (523)
+|+|+|++|.||+|+|++. +..+|++..+++ .++.++++++.
T Consensus 477 ~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~ 533 (675)
T 3d2f_A 477 PVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELI 533 (675)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHH
T ss_pred eEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHH
Confidence 8999999999999999995 788898876544 46888888763
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=6.9e-80 Score=651.82 Aligned_cols=460 Identities=55% Similarity=0.864 Sum_probs=425.0
Q ss_pred CEEEEEccccceEEEEE---------------ecceEEEEcCCceEecHhhHhhhhhCcCchhhhchhhcCCCCCChhhh
Q 009882 8 PAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQ 72 (523)
Q Consensus 8 ~vvGID~GTt~s~va~~---------------~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~ 72 (523)
.+||||||||||+||++ .+||+|+|.++++++|..|+.+...+| ++++++||++|+++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~----- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK----- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC-----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE-----
Confidence 58999999999999998 399999998888999999999999999 999999999998431
Q ss_pred ccccccCeEEEecCCCCceEEEEEcCCceeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHH
Q 009882 73 GDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGV 152 (523)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A~~ 152 (523)
+ ..+ +..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|++
T Consensus 77 ---------~------------~~~--g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~ 133 (509)
T 2v7y_A 77 ---------V------------EIE--GKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGR 133 (509)
T ss_dssp ---------E------------EET--TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ---------E------------EEC--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 1 112 24679999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHH
Q 009882 153 IAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHF 232 (523)
Q Consensus 153 ~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l 232 (523)
.||++++++++||+|||++|+.... .+.++||||+||||||++++++.++.++++++.++..+||++||+.|++++
T Consensus 134 ~AGl~~~~li~Ep~AAAlay~~~~~----~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l 209 (509)
T 2v7y_A 134 IAGLEVERIINEPTAAALAYGLDKE----EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYL 209 (509)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTGGGS----CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred HcCCCeEEEecCHHHHHHHHhhccC----CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHH
Confidence 9999999999999999999987654 578999999999999999999998999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCceeEEEEecccC---C-eeeEEEEcHHHHHHHHHHHHHHHHHHH
Q 009882 233 VQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYE---G-IDFYSTITRARFEELNMDLFRKCMEPV 308 (523)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~~~i~~~~~---~-~~~~~~itr~~~e~~~~~~~~~~~~~i 308 (523)
.++|+++++.++..+++.+.+|+.+||++|+.||......+.++.+.+ | .++...|+|++|+++++|+++++.+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i 289 (509)
T 2v7y_A 210 VNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPV 289 (509)
T ss_dssp HHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHH
T ss_pred HHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHH
Confidence 999999988888888999999999999999999999988888876554 2 467789999999999999999999999
Q ss_pred HHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhCCCCccccceEeeecc
Q 009882 309 EKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVT 388 (523)
Q Consensus 309 ~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~~~~~~~~~~~~~~~~ 388 (523)
+++|+++++...+|+.|+|+||+|++|+|++.|++.| +.++....||++|||+|||++|+.+++. .+++.+.|++
T Consensus 290 ~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~ 364 (509)
T 2v7y_A 290 RQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVT 364 (509)
T ss_dssp HHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCCCCBC
T ss_pred HHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceEEEee
Confidence 9999999998889999999999999999999999999 5677888999999999999999999863 4678899999
Q ss_pred cCccceEeeCCEEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCccccccCcceeEEEEeCCCCCCCCcceEEEE
Q 009882 389 PLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVC 468 (523)
Q Consensus 389 ~~s~gi~~~~~~~~~ii~~~~~lP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~~~~~~~~~~~i~v~ 468 (523)
|++||+++.++.+.++|+||+++|++++..|++..|+|+.+.|.+|||++..+.+|+.||++.|.++|+.++|.++|+++
T Consensus 365 p~slgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~ 444 (509)
T 2v7y_A 365 PLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVT 444 (509)
T ss_dssp SSEEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEE
T ss_pred ccccceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999899999
Q ss_pred EEecCCceEEEEEEEcCCCceeeEEcC----CchhhHHHHH
Q 009882 469 FDIDANGILNVSAEDKTTAKRTRSQSP----TTRVDCQRMK 505 (523)
Q Consensus 469 ~~~d~~g~l~v~~~~~~~~~~~~~~~~----~~~~~~~~~~ 505 (523)
|++|.||+|+|++.+..+|++..+++. ++.++++++.
T Consensus 445 f~id~~gil~v~a~~~~~g~~~~~~i~~~~~l~~~~i~~~~ 485 (509)
T 2v7y_A 445 FDIDANGIVHVRAKDLGTNKEQSITIKSSSGLSEEEIQRMI 485 (509)
T ss_dssp EEECTTSCEEEEEEETTTCCEEEEEECSSCSCCSHHHHHHH
T ss_pred EEEcCCceEEEEEEEcCCCcEEEEEEEecCCCCHHHHHHHH
Confidence 999999999999999999999888765 5888888773
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=4.8e-64 Score=518.14 Aligned_cols=367 Identities=80% Similarity=1.205 Sum_probs=346.3
Q ss_pred CCCEEEEEccccceEEEEE---------------ecceEEEEcCCceEecHhhHhhhhhCcCchhhhchhhcCCCCCChh
Q 009882 6 EGPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDAS 70 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~---------------~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 70 (523)
...+||||||||||+||++ .+||+|+|.++++++|..|..+...+|.++++++||++|+.++++.
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~ 101 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDAT 101 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHH
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHH
Confidence 5579999999999999988 6799999999999999999999999999999999999999999999
Q ss_pred hhccccccCeEEEecCCCCceEEEEEcCCceeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHH
Q 009882 71 VQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDA 150 (523)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 150 (523)
++...+.+||.+.. .++.+.+.+.+.++...++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|
T Consensus 102 ~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a 180 (404)
T 3i33_A 102 VQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDA 180 (404)
T ss_dssp HHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHH
Confidence 99999999999886 67788888988887889999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHH
Q 009882 151 GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVN 230 (523)
Q Consensus 151 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~ 230 (523)
++.||++++.+++||+|||++|+.........+.+++|||+||||+|++++++.++.+++++..++..+||++||+.|++
T Consensus 181 ~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 260 (404)
T 3i33_A 181 GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 260 (404)
T ss_dssp HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHH
Confidence 99999999999999999999998766533336789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCceeEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHH
Q 009882 231 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEK 310 (523)
Q Consensus 231 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~ 310 (523)
++.+++.++++.++..+++.+.+|+.+||++|+.|+......+.++.+.++.++...|+|++|+++++++++++.+.|.+
T Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~ 340 (404)
T 3i33_A 261 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEK 340 (404)
T ss_dssp HHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHH
T ss_pred HHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999899999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 311 CLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 311 ~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
+|++++....+|+.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.+++
T Consensus 341 ~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 341 ALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 999999988899999999999999999999999998888888999999999999999998874
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=7.7e-63 Score=507.66 Aligned_cols=362 Identities=65% Similarity=1.026 Sum_probs=343.8
Q ss_pred CCEEEEEccccceEEEEE---------------ecceEEEEcCCceEecHhhHhhhhhCcCchhhhchhhcCCCCCChhh
Q 009882 7 GPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASV 71 (523)
Q Consensus 7 ~~vvGID~GTt~s~va~~---------------~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 71 (523)
..+||||||||||++|++ .+||+|+|.++++++|..|......+|.++++++|+++|+.++++.+
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 97 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSV 97 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHH
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHH
Confidence 568999999999999988 56999999999999999999999999999999999999999999999
Q ss_pred hccccccCeEEEecCCCCceEEEEEcCCceeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHH
Q 009882 72 QGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAG 151 (523)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A~ 151 (523)
+...+.+||.+. +.++.+.+.+.+.++...++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 98 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 176 (394)
T 3qfu_A 98 QKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAG 176 (394)
T ss_dssp HHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 999999999988 6778888888888888899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHH
Q 009882 152 VIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNH 231 (523)
Q Consensus 152 ~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~ 231 (523)
+.||++++.+++||+|||++|+.... ..+.+++|||+||||+|++++++.++.+++++..++..+||.+||+.|.++
T Consensus 177 ~~aGl~~~~li~Ep~Aaa~~~~~~~~---~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~ 253 (394)
T 3qfu_A 177 TIAGLNVLRIVNEPTAAAIAYGLDKS---DKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQ 253 (394)
T ss_dssp HHTTCEEEEEEEHHHHHHHHTTTTSC---SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HHcCCceEEEecCHHHHHHHHhhccC---CCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHH
Confidence 99999999999999999999976553 257899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCceeEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHH
Q 009882 232 FVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKC 311 (523)
Q Consensus 232 l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~~ 311 (523)
+.+++.++++.++..+++.+.+|+.+||++|+.|+......+.++.+.++.++...++|++|+++++++++++.+.|.++
T Consensus 254 l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~ 333 (394)
T 3qfu_A 254 LIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKV 333 (394)
T ss_dssp HHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred HHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHh
Q 009882 312 LRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILS 372 (523)
Q Consensus 312 l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~ 372 (523)
|++++....+++.|+|+||+|++|+|++.|++.|++.++..+.||+++||+|||++|+.++
T Consensus 334 l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 334 LQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999998889999999999999999999999999888888899999999999999998764
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=2.4e-61 Score=498.57 Aligned_cols=363 Identities=31% Similarity=0.534 Sum_probs=325.6
Q ss_pred CCCEEEEEccccceEEEEE---------------ecceEEEEcCCceEecHhhHhhhhhCcCchhhhchhhcCCCCCChh
Q 009882 6 EGPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDAS 70 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~---------------~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 70 (523)
...+||||||||||+||++ .+||+|+|.++++++|..|..+...+|.++++++|+++|+.++++.
T Consensus 12 ~~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~ 91 (409)
T 4gni_A 12 ERVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVD 91 (409)
T ss_dssp -CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCC
T ss_pred CCcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchh
Confidence 4579999999999999986 6899999999999999999999999999999999999999988776
Q ss_pred hhccccccCeEEEecCCCCceEEEEEc----CCceeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHH
Q 009882 71 VQGDMKLWPFKVIAGPADKPMIGVNYK----GEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQA 146 (523)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~ 146 (523)
++.... ++.+. +.++.+.+.+... +....++|+++++++|++|++.++.+++.++.++|||||++|++.||++
T Consensus 92 ~~~~~~--~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~ 168 (409)
T 4gni_A 92 PTHNHA--SAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAA 168 (409)
T ss_dssp CGGGTT--SCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHH
T ss_pred hhhhcc--cccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHH
Confidence 554432 33332 2455555655544 3567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHH
Q 009882 147 TKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDN 226 (523)
Q Consensus 147 l~~A~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~ 226 (523)
+++|++.||++++.+++||+|||++|+.... ....+.+++|||+||||+|++++++.++.++++++.++..+||.+||+
T Consensus 169 ~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~-~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 247 (409)
T 4gni_A 169 LIAAAAAADLEVLQLISEPAAAVLAYDARPE-ATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDK 247 (409)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHHHHHTTC-------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHH
T ss_pred HHHHHHHcCCCeEEEEcCHHHHHHHHhcccc-cCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHH
Confidence 9999999999999999999999999987642 234678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHHHhhhcCCCceeEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHH
Q 009882 227 RMVNHFVQEFKRKNK--KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKC 304 (523)
Q Consensus 227 ~l~~~l~~~~~~~~~--~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~~ 304 (523)
.|++++.++|..+++ .+...+++.+.+|+.+||++|+.||......+.++.+.++.++...|+|++|+++++++++++
T Consensus 248 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i 327 (409)
T 4gni_A 248 VLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGF 327 (409)
T ss_dssp HHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHH
Confidence 999999999999888 777788999999999999999999999999999999899999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCc-cc------ccCCCCchhhHhHHHHHHHHHh
Q 009882 305 MEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGK-EL------CKNINPDEAVAYGAAVQAAILS 372 (523)
Q Consensus 305 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~-~v------~~~~~p~~aVa~Gaa~~a~~~~ 372 (523)
.+.|+++|+++++...+|+.|+|+||+|++|+|++.|++.|+.. .+ ....||++|||+|||++|+...
T Consensus 328 ~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~ 402 (409)
T 4gni_A 328 NRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQ 402 (409)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhh
Confidence 99999999999998889999999999999999999999999654 34 5778999999999999999876
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=9.3e-60 Score=482.68 Aligned_cols=356 Identities=53% Similarity=0.847 Sum_probs=322.6
Q ss_pred CEEEEEccccceEEEEE---------------ecceEEEEcC-CceEecHhhHhhhhhCcCchhhhchhhcCCCCCChhh
Q 009882 8 PAIGIDLGTTYSCVGVW---------------TTPSYVGFTD-TERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASV 71 (523)
Q Consensus 8 ~vvGID~GTt~s~va~~---------------~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 71 (523)
.+||||||||||++|++ .+||+|+|.. +++++|..|+.+...+|+++++++|+++|+.++++.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 57999999999999987 4899999964 6789999999999999999999999999999999888
Q ss_pred hccccccCeEEEecCCCCceEEEEEcCCceeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHH
Q 009882 72 QGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAG 151 (523)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A~ 151 (523)
+...+.+||++..+.++...+.+ + +..++|+++++++|+++++.++.+++.++.++|+|||++|++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~--~--g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 158 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEV--K--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEE--T--TEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEcCCCcEEEEE--C--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 88888899999877777666554 3 3578999999999999999999999988999999999999999999999999
Q ss_pred HHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEe----CCeEEEEEecCCCCCchHHHHHH
Q 009882 152 VIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNR 227 (523)
Q Consensus 152 ~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~----~~~~~v~~~~~~~~lGG~~id~~ 227 (523)
+.||++.+.+++||+|||++|+.... ..+.++||||+||||||+++++.. ++.+++++..++..+||++||+.
T Consensus 159 ~~aGl~~~~li~Ep~Aaa~~~~~~~~---~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~ 235 (383)
T 1dkg_D 159 RIAGLEVKRIINEPTAAALAYGLDKG---TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSR 235 (383)
T ss_dssp HHTTCEESCCCBHHHHHHHHHTCCC----CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHH
T ss_pred HHcCCceEEEeccHHHHHHHHHhccC---CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHH
Confidence 99999999999999999999986543 256789999999999999999998 57888888888889999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCceeEEEEecccC---C-eeeEEEEcHHHHHHHHHHHHHH
Q 009882 228 MVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYE---G-IDFYSTITRARFEELNMDLFRK 303 (523)
Q Consensus 228 l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~~~i~~~~~---~-~~~~~~itr~~~e~~~~~~~~~ 303 (523)
|.+++.+++.++++.++..+++.+.+|+.+||++|+.|+......+.++.+.+ | .++...|+|++|++++++.+++
T Consensus 236 l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~ 315 (383)
T 1dkg_D 236 LINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNR 315 (383)
T ss_dssp HHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHH
Confidence 99999999998888888888999999999999999999998888888775543 3 4567799999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHH
Q 009882 304 CMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAIL 371 (523)
Q Consensus 304 ~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~ 371 (523)
+.+.|.++|+++++...+++.|+|+||+|++|+|++.|++.| +.++..+.||+++||+|||++|+.+
T Consensus 316 i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l 382 (383)
T 1dkg_D 316 SIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVL 382 (383)
T ss_dssp HHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhh
Confidence 999999999999988888999999999999999999999999 5678888999999999999998754
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=6.4e-43 Score=352.43 Aligned_cols=305 Identities=25% Similarity=0.347 Sum_probs=236.5
Q ss_pred CCEEEEEccccceEEEEE------ecceEEEEcCC--c-eEecHhhHhhhhhCcCchhhhchhhcCCCCCChhhhccccc
Q 009882 7 GPAIGIDLGTTYSCVGVW------TTPSYVGFTDT--E-RLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKL 77 (523)
Q Consensus 7 ~~vvGID~GTt~s~va~~------~~Ps~v~~~~~--~-~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~~~~~ 77 (523)
+.+||||||||||++++. .+||+|+|.++ . .++|.+|+....++|.++...
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~~~~~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~-------------------- 62 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKGIVVNEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI-------------------- 62 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTEEEEEEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE--------------------
T ss_pred CceEEEEcCcCcEEEEECCCCEEEeeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE--------------------
Confidence 358999999999999864 68999999865 3 479999998777777665321
Q ss_pred cCeEEEecCCCCceEEEEEcCCceeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCc
Q 009882 78 WPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLN 157 (523)
Q Consensus 78 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A~~~aGl~ 157 (523)
+|++ ++ .+ . ....+++++++++++++.. ..++ ...+|||||++|++.||+++++|++.||++
T Consensus 63 ~p~~-----~g--~i----~---~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~~a~~~aG~~ 124 (344)
T 1jce_A 63 RPMR-----DG--VI----A---DYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAILDAGLEAGAS 124 (344)
T ss_dssp CCEE-----TT--EE----S---SHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHHHHHHHTTCS
T ss_pred ecCC-----CC--ee----C---ChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHHHHHHHcCCC
Confidence 1221 11 00 0 0113566666666655432 1233 368999999999999999999999999999
Q ss_pred eeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHH
Q 009882 158 VMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFK 237 (523)
Q Consensus 158 ~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~ 237 (523)
.+.+++||+|||++|+.... .+.+++|||+||||||++++.... . ...++..+||++||+.|.+++.+++.
T Consensus 125 ~~~li~ep~Aaa~~~~~~~~----~~~~~lVvDiGggttdvsv~~~~~--~---~~~~~~~lGG~~id~~l~~~l~~~~~ 195 (344)
T 1jce_A 125 KVFLIEEPMAAAIGSNLNVE----EPSGNMVVDIGGGTTEVAVISLGS--I---VTWESIRIAGDEMDEAIVQYVRETYR 195 (344)
T ss_dssp EEEEEEHHHHHHHHTTCCTT----SSSCEEEEEECSSCEEEEEEETTE--E---EEEEEESCSHHHHHHHHHHHHHHHHC
T ss_pred eEeccCCHHHHHHhcCCCCC----CCceEEEEEeCCCeEEEEEEEcCC--E---EeeCCCCccChhHHHHHHHHHHHHhC
Confidence 99999999999999986543 567899999999999999998643 1 23456789999999999999987653
Q ss_pred HhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCce------eEEEEe--cccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHH
Q 009882 238 RKNKKDISGNPRALRRLRTACERAKRTLSSTAQ------TTIEID--SLYEGIDFYSTITRARFEELNMDLFRKCMEPVE 309 (523)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~------~~~~i~--~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~ 309 (523)
.++. ...||++|+.|+.... ..+.++ .+.+|.+..+.|+|++|+++++|.++++.+.|.
T Consensus 196 ----~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~ 262 (344)
T 1jce_A 196 ----VAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVR 262 (344)
T ss_dssp ----EECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHH
T ss_pred ----cccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 1111 4689999999987642 244443 344677788999999999999999999999999
Q ss_pred HHHHHcCCC--CCCc-ceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHh
Q 009882 310 KCLRDAKMD--KSTV-HDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILS 372 (523)
Q Consensus 310 ~~l~~~~~~--~~~i-~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~ 372 (523)
++|++++.. ...+ +.|+|+||+|++|+|++.|++.| +.++....||+++||+||+++|..++
T Consensus 263 ~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 263 TTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHHhChH
Confidence 999987532 1224 68999999999999999999999 46677788999999999999987544
No 11
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.96 E-value=3.2e-30 Score=258.72 Aligned_cols=230 Identities=17% Similarity=0.134 Sum_probs=167.6
Q ss_pred eHHHHHHHHHHHHHHHHHHHhCCCCCcEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CceeeeechhHH
Q 009882 104 AAEEISSMVLIKMREIAEAYLGSTIKNAV--VTVPAYFNDSQRQATKDAGVIA--------G------LNVMRIINEPTA 167 (523)
Q Consensus 104 ~~~~v~~~~l~~l~~~a~~~~~~~~~~~V--itVPa~~~~~qr~~l~~A~~~a--------G------l~~~~li~Ep~A 167 (523)
.+++...+++..|+..++...+.+ .++| ++||++|+..||+++++++..+ | ++.+.+++||.|
T Consensus 96 ~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~A 174 (346)
T 2fsj_A 96 ASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVG 174 (346)
T ss_dssp TSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHH
T ss_pred cChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHH
Confidence 445666777777776542222333 4799 9999999999999999997776 4 356889999999
Q ss_pred HHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 009882 168 AAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGN 247 (523)
Q Consensus 168 aa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~ 247 (523)
||++|. ..........+++|+|+||||||++++++.++. .+....++..+||+++++.|.+++.+++. ... .
T Consensus 175 Aa~~~l-~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g----~~~--~ 246 (346)
T 2fsj_A 175 AALYLL-NQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKETG----FVV--P 246 (346)
T ss_dssp HHHHHH-HHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHHC----CCC--C
T ss_pred HHHHhh-ccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHhC----CCc--C
Confidence 999882 211111234689999999999999999987766 45555677899999999999988876653 210 0
Q ss_pred HHHHHHHHHHHHHHhhhcCCCceeEEEEecccCCeeeEEEEcHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEE
Q 009882 248 PRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARF-EELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVV 326 (523)
Q Consensus 248 ~~~~~~l~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~-e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~Vi 326 (523)
.. ...+| .. ..+.+ .|. .++++++ +++++++++++.+.+++.|+++ .+.++.|+
T Consensus 247 i~-----~~~~e-------~~--~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~Iv 301 (346)
T 2fsj_A 247 FD-----LAQEA-------LS--HPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSLI 301 (346)
T ss_dssp HH-----HHHHH-------TT--SCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEEE
T ss_pred CC-----HHHHh-------cC--CeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEEE
Confidence 00 11222 01 11222 233 3568999 9999999999999999999876 45689999
Q ss_pred EecCccCcHHHHHHHHHhhCCccc-ccCCCCchhhHhHHHHHHH
Q 009882 327 LVGGSTRIPKVQQLLQDFFNGKEL-CKNINPDEAVAYGAAVQAA 369 (523)
Q Consensus 327 LvGG~s~~p~v~~~l~~~f~~~~v-~~~~~p~~aVa~Gaa~~a~ 369 (523)
|+||+|++ +++.+++.|+...+ ....||++|+|+|+..++.
T Consensus 302 L~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 302 PVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred EECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 99999999 99999999964332 2267999999999998764
No 12
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.96 E-value=4.1e-28 Score=236.01 Aligned_cols=203 Identities=21% Similarity=0.329 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHhcccccccCCCCCeE
Q 009882 106 EEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKN 185 (523)
Q Consensus 106 ~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~ 185 (523)
.+....+++++++.++...+.....+++|+|+.|...+|+.++++++.+|++...++.||+|++++++.. .
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~---------~ 140 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN---------D 140 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS---------S
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC---------C
Confidence 3566888999999888888888889999999999999999999999999999999999999999988653 2
Q ss_pred EEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhc
Q 009882 186 VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTL 265 (523)
Q Consensus 186 vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~L 265 (523)
.+|+|+||||||++++. .+.+. ......+||.+||+.+.+++.- -...+|++|+.+
T Consensus 141 ~~viDiGggst~~~~~~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~~-------------------~~~~ae~~k~~~ 196 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIE--KGKIT---ATFDEPTGGTHLSLVLAGSYKI-------------------PFEEAETIKKDF 196 (272)
T ss_dssp EEEEEECSSCEEEEEEE--TTEEE---EECCBSCCHHHHHHHHHHHHTC-------------------CHHHHHHHHHSS
T ss_pred EEEEEECCCcEEEEEEE--CCEEE---EEecCCCcHHHHHHHHHHHhCC-------------------CHHHHHHHHHhc
Confidence 49999999999999987 33332 3467899999999999887731 135789999987
Q ss_pred CCCceeEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhh
Q 009882 266 SSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 345 (523)
Q Consensus 266 s~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f 345 (523)
+ +++++++++.+.++++.+.+.+.++..+ +++.|+|+||++++|++++.+++.|
T Consensus 197 ~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l 250 (272)
T 3h1q_A 197 S----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL 250 (272)
T ss_dssp T----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH
T ss_pred C----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh
Confidence 5 5889999999999999999999988653 4789999999999999999999999
Q ss_pred CCcccccCCCCchhhHhHHHHHH
Q 009882 346 NGKELCKNINPDEAVAYGAAVQA 368 (523)
Q Consensus 346 ~~~~v~~~~~p~~aVa~Gaa~~a 368 (523)
+.++..+.+|++++|+|||++|
T Consensus 251 -~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 251 -GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp -SSCCBCCSSGGGHHHHHHHTTC
T ss_pred -CCCccccCChHHHHHHHHHhcC
Confidence 6788888999999999999864
No 13
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.95 E-value=3.2e-27 Score=243.91 Aligned_cols=228 Identities=16% Similarity=0.152 Sum_probs=165.4
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHh-cccccccCCCCCeEEEEEEeCCcceEEEEEEEeC
Q 009882 128 IKNAVVTVPAYFNDSQRQATKDAG-VIAGLNVMRIINEPTAAAIA-YGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEE 205 (523)
Q Consensus 128 ~~~~VitVPa~~~~~qr~~l~~A~-~~aGl~~~~li~Ep~Aaa~~-~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~ 205 (523)
...+|+|+|++|+..+|+++.+++ +.+|++.+.+++||.||+++ |... ....... +.+|+|+|+||||++++. .
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~-~~~~~~~-~glVvDiG~gtt~v~~v~--~ 182 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSR-QVGERTL-TGTVIDSGDGVTHVIPVA--E 182 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGST-TCCSCCC-CEEEEEESSSCEEEEEEE--T
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhccc-ccCCCCC-eEEEEEcCCCceEEEEeE--C
Confidence 357999999999999999999998 88999999999999999987 4211 1001122 669999999999999986 3
Q ss_pred CeEEEEEecCCCCCchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCc----------------
Q 009882 206 GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTA---------------- 269 (523)
Q Consensus 206 ~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~---------------- 269 (523)
+. .+........+||+++|+.|.+++.+++. ..... .-...+|++|+.++...
T Consensus 183 G~-~~~~~~~~~~lGG~~lt~~l~~~l~~~~~-----~~~~~-----~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~ 251 (418)
T 1k8k_A 183 GY-VIGSCIKHIPIAGRDITYFIQQLLRDREV-----GIPPE-----QSLETAKAVKERYSYVCPDLVKEFNKYDTDGSK 251 (418)
T ss_dssp TE-ECGGGCEEESCSHHHHHHHHHHHHHTTCC-----CCCGG-----GHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGG
T ss_pred CE-EcccceEEEeCcHHHHHHHHHHHHHhcCC-----CCCCH-----HHHHHHHHHHHhhchhcccHHHHHHhhcccccc
Confidence 32 22222356789999999999999865421 11100 11256788888776432
Q ss_pred -eeEEEEecccCCeeeEEEEcHHHH---HHHHHHHH------HHHHHHHHHHHHHcCC--CCCCcceEEEecCccCcHHH
Q 009882 270 -QTTIEIDSLYEGIDFYSTITRARF---EELNMDLF------RKCMEPVEKCLRDAKM--DKSTVHDVVLVGGSTRIPKV 337 (523)
Q Consensus 270 -~~~~~i~~~~~~~~~~~~itr~~~---e~~~~~~~------~~~~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~~p~v 337 (523)
...+.++....+.+..+.+++++| |.+++|.+ ..+.+.|.+.|.++.. ....++.|+|+||+|++|.+
T Consensus 252 ~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~ 331 (418)
T 1k8k_A 252 WIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDF 331 (418)
T ss_dssp TCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTH
T ss_pred cceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccH
Confidence 135666655556677889999999 55555532 5688889999988753 33447899999999999999
Q ss_pred HHHHHHhhCC-----------------------cccccCCCCchhhHhHHHHHHHH
Q 009882 338 QQLLQDFFNG-----------------------KELCKNINPDEAVAYGAAVQAAI 370 (523)
Q Consensus 338 ~~~l~~~f~~-----------------------~~v~~~~~p~~aVa~Gaa~~a~~ 370 (523)
+++|++.+.. .++..+.+|..++.+||+++|..
T Consensus 332 ~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 332 GRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 9998875521 12334457889999999999863
No 14
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.95 E-value=3.2e-27 Score=240.74 Aligned_cols=299 Identities=16% Similarity=0.163 Sum_probs=186.5
Q ss_pred CCCEEEEEccccceEEEEEe--cceEEEEcCCceEecHhhHhhhhhCcCchhhhchhhcCCCCCChhhhccccccCeEEE
Q 009882 6 EGPAIGIDLGTTYSCVGVWT--TPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVI 83 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~--~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~~~~~~~~~~~ 83 (523)
...++|||+||++++++.+. -|.+..+... .......+.....+++.+...+|+++++. . ...+.. .+.
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~~~~~~i~~~g~~-~~ps~~~~~g~i~d~~~~~~~ik~~~~~~--~----~~~~~v--~~~ 82 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVSGNPPALKALASR-PTPPGLLMEGMVAEPAALAQEIKELLLEA--R----TRKRYV--VTA 82 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEETTTTEEEEEEEE-ECCTTSEETTEESCHHHHHHHHHHHHHHH--T----CCCCEE--EEE
T ss_pred CCceEEEEeCCCeEEEEEEeCCceEEEEEEeE-ECCCCcccCCCcCCHHHHHHHHHHHHHHc--C----CCcceE--EEE
Confidence 45689999999999988761 1222111100 00000112233456777888888888641 0 001100 011
Q ss_pred ecCCCCce-EEEEEcCCceeeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHH-------------------
Q 009882 84 AGPADKPM-IGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQ------------------- 143 (523)
Q Consensus 84 ~~~~~~~~-~~v~~~~~~~~~~~~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~~~~~q------------------- 143 (523)
. +..... ..+.. ..++++++... ++..++.+++.++.++++.+|. .+.+
T Consensus 83 i-~~~~~~~~~~~~----~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~~v~~va~~~~ 151 (377)
T 2ych_A 83 L-SNLAVILRPIQV----PKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQVQVMVAAARQE 151 (377)
T ss_dssp E-CGGGCEEEEEEE----ECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEEEEEEEEEEHH
T ss_pred e-cCCcEEEEEEEC----CCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCcceeEEEEEEecHH
Confidence 1 111111 11111 34677776653 3446777889899999999983 2222
Q ss_pred -HHHHHHHHHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchH
Q 009882 144 -RQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGE 222 (523)
Q Consensus 144 -r~~l~~A~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~ 222 (523)
.+.+++|++.||+++..++.||.|||.+|+.... ...+..++|+|+||||||+++++. +.+ ...++..+||+
T Consensus 152 ~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~--~~~~~~~~vvDiGggttdi~i~~~--g~~---~~~~~~~~GG~ 224 (377)
T 2ych_A 152 AVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLA--EEPDRVFLVLDIGAESTSLVLLRG--DKP---LAVRVLTLSGK 224 (377)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHH--TSTTCEEEEEEECSSCEEEEEEET--TEE---EEEEEESCSHH
T ss_pred HHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcc--cccCCeEEEEEECCCcEEEEEEEC--CEE---EEEEeeechHH
Confidence 3889999999999999999999999999864332 124567999999999999999973 333 23456789999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCceeEEEEecccCCeeeEEEEcHHHHHHHHHHHHH
Q 009882 223 DFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFR 302 (523)
Q Consensus 223 ~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~ 302 (523)
+||+.|.+.+ +.+ ..+||++|+.++.........+...+-......++++++++++++.++
T Consensus 225 ~i~~~i~~~~--------~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~i~~~~~ 285 (377)
T 2ych_A 225 DFTEAIARSF--------NLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLV 285 (377)
T ss_dssp HHHHHHHHHT--------TCC-----------HHHHHHHHHHTC-------------------------CHHHHHHHHHH
T ss_pred HHHHHHHHHh--------CCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHHHHHHHHHHHHH
Confidence 9999998732 221 468999999987643221110000011113357899999999999999
Q ss_pred HHHHHHHHHHHHc--CCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccc
Q 009882 303 KCMEPVEKCLRDA--KMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELC 351 (523)
Q Consensus 303 ~~~~~i~~~l~~~--~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~ 351 (523)
++.+.|++.|+.. +.....++.|+|+||+|++|.+++.+++.|+ .++.
T Consensus 286 ~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~-~~v~ 335 (377)
T 2ych_A 286 ELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG-VNLE 335 (377)
T ss_dssp HHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT-SEEE
T ss_pred HHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC-CCeE
Confidence 9999999999853 4555679999999999999999999999994 4443
No 15
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.94 E-value=1.3e-26 Score=235.59 Aligned_cols=292 Identities=17% Similarity=0.204 Sum_probs=194.2
Q ss_pred CCCEEEEEccccceEEEEE-------ecceEEEEcC----------CceEecHhhHhhhhhCcCchhhhchhhcCCCCCC
Q 009882 6 EGPAIGIDLGTTYSCVGVW-------TTPSYVGFTD----------TERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 68 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~-------~~Ps~v~~~~----------~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~ 68 (523)
+...|+||+||+++++++. .+||+++... ...++|++|.... . ...+++
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~--~~~~~~-------- 69 (375)
T 2fxu_A 4 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----G--ILTLKY-------- 69 (375)
T ss_dssp CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHT----T--SEEEEC--------
T ss_pred CCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcC----c--ccceec--------
Confidence 3457999999999999987 6899888643 2357888887541 0 011111
Q ss_pred hhhhccccccCeEEEecCCCCceEEEEEcCCceeeeHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEeCCCCCHHHHHH
Q 009882 69 ASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGST--IKNAVVTVPAYFNDSQRQA 146 (523)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~l~~l~~~a~~~~~~~--~~~~VitVPa~~~~~qr~~ 146 (523)
|++ + + .+.--+....+++++.. +.++.. ...+++|+|++++..+|++
T Consensus 70 ----------Pi~-----~------------G-~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~ 118 (375)
T 2fxu_A 70 ----------PIE-----H------------G-IITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREK 118 (375)
T ss_dssp ----------SEE-----T------------T-EECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHH
T ss_pred ----------ccc-----C------------C-cccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHH
Confidence 111 0 0 01112233444555442 223332 2469999999999999998
Q ss_pred HHHH-HHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHH
Q 009882 147 TKDA-GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 225 (523)
Q Consensus 147 l~~A-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id 225 (523)
+.++ .+.+|++.+.+++||.|||++++. .+.+|+|+|+||||++.+. ++ ..+........+||+++|
T Consensus 119 ~~e~~fe~~g~~~~~~~~e~~aaa~a~g~---------~~~lVvDiG~gtt~v~~v~--~G-~~~~~~~~~~~~GG~~lt 186 (375)
T 2fxu_A 119 MTQIMFETFNVPAMYVAIQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIY--EG-YALPHAIMRLDLAGRDLT 186 (375)
T ss_dssp HHHHHHHTTCCSEEEEEEHHHHHHHHTTC---------SSEEEEEECSSCEEEEEEE--TT-EECGGGCEEESCCHHHHH
T ss_pred HHHHHHHhcCcceEEEccchheeeeecCC---------CeEEEEEcCCCceEEeEeE--CC-EEeccceEEeccCHHHHH
Confidence 8876 588899999999999999999874 2579999999999998774 34 222222345789999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcC----------------CCceeEEEEecccCCeeeEEEEc
Q 009882 226 NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLS----------------STAQTTIEIDSLYEGIDFYSTIT 289 (523)
Q Consensus 226 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls----------------~~~~~~~~i~~~~~~~~~~~~it 289 (523)
+.|.+++..+ +..+.. . .-...+|++|+.++ ......+.++ +|. .+.++
T Consensus 187 ~~l~~~l~~~-----~~~~~~-~----~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg~--~i~i~ 251 (375)
T 2fxu_A 187 DYLMKILTER-----GYSFVT-T----AEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DGQ--VITIG 251 (375)
T ss_dssp HHHHHHHHHH-----TCCCCS-H----HHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TSC--EEEES
T ss_pred HHHHHHHHhc-----CCCCCc-H----HHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CCC--EEEEC
Confidence 9999998765 111111 0 01133455555443 2223334433 232 46788
Q ss_pred HHHH---HHHHHHH-----HHHHHHHHHHHHHHcCC--CCCCcceEEEecCccCcHHHHHHHHHhhC----C---ccccc
Q 009882 290 RARF---EELNMDL-----FRKCMEPVEKCLRDAKM--DKSTVHDVVLVGGSTRIPKVQQLLQDFFN----G---KELCK 352 (523)
Q Consensus 290 r~~~---e~~~~~~-----~~~~~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~~p~v~~~l~~~f~----~---~~v~~ 352 (523)
++.| |.+++|. ...+.+.|.+.|.++.. ....++.|+|+||+|++|.++++|++.+. . .++..
T Consensus 252 ~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~ 331 (375)
T 2fxu_A 252 NERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIA 331 (375)
T ss_dssp THHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEEC
T ss_pred hhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEc
Confidence 8877 3444443 24577888888886532 22336789999999999999999998773 1 34556
Q ss_pred CCCCchhhHhHHHHHHH
Q 009882 353 NINPDEAVAYGAAVQAA 369 (523)
Q Consensus 353 ~~~p~~aVa~Gaa~~a~ 369 (523)
+.+|..++++||+++|.
T Consensus 332 ~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 332 PPERKYSVWIGGSILAS 348 (375)
T ss_dssp CTTTTSHHHHHHHHHHH
T ss_pred CCCCCccEEcchHHhhC
Confidence 77999999999999987
No 16
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.94 E-value=4.2e-26 Score=233.63 Aligned_cols=198 Identities=15% Similarity=0.164 Sum_probs=156.7
Q ss_pred HHHHHHHHHHHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCch
Q 009882 142 SQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGG 221 (523)
Q Consensus 142 ~qr~~l~~A~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG 221 (523)
...+.+.+|++.|||++..++.||.|||++++.... ++..++|+|+||||||+++++ ++.+. ..++..+||
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~----~~~gv~vvDiGggttdisi~~--~g~~~---~~~~i~~GG 238 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE----KDRGVVVVNLGYNFTGLIAYK--NGVPI---KISYVPVGM 238 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH----HHHCEEEEEECSSSEEEEEEE--TTEEE---EEEEESCCH
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc----ccCCEEEEEECCCcEEEEEEE--CCEEE---EEEecccHH
Confidence 356788999999999999999999999998865433 455799999999999999997 44443 234578999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCC-----ceeEEEEecccCCeeeEEEEcHHHHHHH
Q 009882 222 EDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSST-----AQTTIEIDSLYEGIDFYSTITRARFEEL 296 (523)
Q Consensus 222 ~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~-----~~~~~~i~~~~~~~~~~~~itr~~~e~~ 296 (523)
++||+.|+..+. ....+||++|+.++.. ....+.++.... .....+++++|+++
T Consensus 239 ~~it~dIa~~l~-------------------~~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~--~~~~~is~~~l~~i 297 (419)
T 4a2a_A 239 KHVIKDVSAVLD-------------------TSFEESERLIITHGNAVYNDLKEEEIQYRGLDG--NTIKTTTAKKLSVI 297 (419)
T ss_dssp HHHHHHHHHHHT-------------------CCHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS--CSEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHC-------------------CCHHHHHHHHHHhccCcccCCCCceEEEeecCC--ccceEEcHHHHHHH
Confidence 999999987652 1247899999998652 345677765432 35578999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCC------CCCcceEEEecCccCcHHHHHHHHHhhCCcccc--c-----C----------
Q 009882 297 NMDLFRKCMEPVEKCLRDAKMD------KSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELC--K-----N---------- 353 (523)
Q Consensus 297 ~~~~~~~~~~~i~~~l~~~~~~------~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~--~-----~---------- 353 (523)
++|.++++.+.+++.|+.++.+ ...++.|+|+||+|++|.+++.+++.|+ .++. . +
T Consensus 298 i~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g-~~vri~~~~~~~p~~~~~~~~~~ 376 (419)
T 4a2a_A 298 IHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFK-SPVRTGCYANSDRPSIINADEVA 376 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHT-SCEEECCGGGSSSCCCBTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHC-CCeEEEecCCCCchhccCccccc
Confidence 9999999999999999999873 4568999999999999999999999994 4332 2 1
Q ss_pred CCCchhhHhHHHHHHHH
Q 009882 354 INPDEAVAYGAAVQAAI 370 (523)
Q Consensus 354 ~~p~~aVa~Gaa~~a~~ 370 (523)
.+|..+.|.|.++++..
T Consensus 377 ~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 377 NDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp TCGGGHHHHHTTCC---
T ss_pred CCchHHHHHHHHHHHhh
Confidence 48899999999998764
No 17
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.91 E-value=7.5e-24 Score=184.48 Aligned_cols=123 Identities=70% Similarity=0.999 Sum_probs=114.3
Q ss_pred eeecccCccceEeeCCEEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCccccccCcceeEEEEeCCCCCCCCcc
Q 009882 384 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 463 (523)
Q Consensus 384 ~~~~~~~s~gi~~~~~~~~~ii~~~~~lP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~~~~~~~~~~ 463 (523)
+.|++|+|+|+++.+|.|.+||+||++||++++..|++..|||+.+.|.+|||++..+.+|..||+|.|.|+|++|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCceEEEEEEEcCCCceeeEEcC-----CchhhHHHHHH
Q 009882 464 QITVCFDIDANGILNVSAEDKTTAKRTRSQSP-----TTRVDCQRMKL 506 (523)
Q Consensus 464 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 506 (523)
+|+|+|++|.||+|+|++.+..||++..+++. ++.+|++++..
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~ 129 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVH 129 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHH
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999988875 57788887743
No 18
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.91 E-value=7.3e-24 Score=184.31 Aligned_cols=123 Identities=59% Similarity=0.859 Sum_probs=115.1
Q ss_pred eeecccCccceEeeCCEEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCccccccCcceeEEEEeCCCCCCCCcc
Q 009882 384 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 463 (523)
Q Consensus 384 ~~~~~~~s~gi~~~~~~~~~ii~~~~~lP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~~~~~~~~~~ 463 (523)
+.|++|+|+|+++.+|.|.+|||||++||++++..|++..|||+.+.|.+|||++..+.+|..||+|.|.|+|++|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCceEEEEEEEcCCCceeeEEcC----CchhhHHHHHH
Q 009882 464 QITVCFDIDANGILNVSAEDKTTAKRTRSQSP----TTRVDCQRMKL 506 (523)
Q Consensus 464 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 506 (523)
+|+|+|++|.||+|+|++.+..||++..+.+. ++.+|++++..
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~Ls~~ei~~~~~ 128 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQIENMIK 128 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSSSSCHHHHHHHHH
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecCCCCCHHHHHHHHH
Confidence 99999999999999999999999999877765 68899997744
No 19
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.91 E-value=1.3e-23 Score=183.22 Aligned_cols=123 Identities=63% Similarity=0.927 Sum_probs=114.8
Q ss_pred eeecccCccceEeeCCEEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCccccccCcceeEEEEeCCCCCCCCcc
Q 009882 384 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 463 (523)
Q Consensus 384 ~~~~~~~s~gi~~~~~~~~~ii~~~~~lP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~~~~~~~~~~ 463 (523)
+.|++|+|+|+++.+|.|.+|||||++||++++..|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+|++|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCceEEEEEEEcCCCceeeEEcC-----CchhhHHHHHH
Q 009882 464 QITVCFDIDANGILNVSAEDKTTAKRTRSQSP-----TTRVDCQRMKL 506 (523)
Q Consensus 464 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 506 (523)
+|+|+|++|.||+|+|++.+..+|++..+++. ++.++++++..
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~ 129 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVE 129 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHH
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999877664 57888887743
No 20
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.90 E-value=3.9e-23 Score=184.90 Aligned_cols=128 Identities=58% Similarity=0.810 Sum_probs=115.0
Q ss_pred ccceEeeecccCccceEeeCCEEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCccccccCcceeEEEEeCCCCC
Q 009882 379 VQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPA 458 (523)
Q Consensus 379 ~~~~~~~~~~~~s~gi~~~~~~~~~ii~~~~~lP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~~~~~ 458 (523)
...+.+.|++|+|||+++.+|.+.+|||||++||++++..|++..|||+.+.|.+|||++..+.+|..||+|.|.|+|++
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceEEEEEEecCCceEEEEEEEcCCCceeeEEcC----CchhhHHHHHH
Q 009882 459 PRGVPQITVCFDIDANGILNVSAEDKTTAKRTRSQSP----TTRVDCQRMKL 506 (523)
Q Consensus 459 ~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 506 (523)
|+|.++|+|+|++|.||+|+|++.+..+|++..+++. ++.+|++++..
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~~~Ls~eei~~mi~ 148 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVK 148 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCCCCCCHHHHHHHHH
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecCccCCHHHHHHHHH
Confidence 9999999999999999999999999999999988775 57888887643
No 21
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.90 E-value=4.7e-23 Score=190.83 Aligned_cols=123 Identities=61% Similarity=0.905 Sum_probs=116.8
Q ss_pred EeeecccCccceEeeCCEEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCccccccCcceeEEEEeCCCCCCCCc
Q 009882 383 LLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGV 462 (523)
Q Consensus 383 ~~~~~~~~s~gi~~~~~~~~~ii~~~~~lP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~~~~~~~~~ 462 (523)
++.|++|+|+|+++.+|.|.+|||||++||++++..|++..|||+.+.|.+|||++..+.+|..||+|.|.|+|++|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEecCCceEEEEEEEcCCCceeeEEcC----CchhhHHHHH
Q 009882 463 PQITVCFDIDANGILNVSAEDKTTAKRTRSQSP----TTRVDCQRMK 505 (523)
Q Consensus 463 ~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~----~~~~~~~~~~ 505 (523)
++|+|+|++|.||+|+|++.+..||++..+++. ++.+|+++|.
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~Ls~eeI~~m~ 128 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMV 128 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTTCSCCHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeeccccccHHHHHHHH
Confidence 999999999999999999999999999988875 5788888774
No 22
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.89 E-value=4.3e-24 Score=212.31 Aligned_cols=227 Identities=15% Similarity=0.195 Sum_probs=148.7
Q ss_pred eeeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCceeeeech
Q 009882 102 QFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAY-FNDS--QR--QATKDA------------GVIAGLNVMRIINE 164 (523)
Q Consensus 102 ~~~~~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~-~~~~--qr--~~l~~A------------~~~aGl~~~~li~E 164 (523)
.+++..+++.+ +.|++ +.. .+.+ ..+|+++|.. |... || +++.+- .+.+++..+.++.|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 45666666643 44443 211 1222 3689999987 6531 22 222221 23445677899999
Q ss_pred hHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHHHhcCCCC
Q 009882 165 PTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDI 244 (523)
Q Consensus 165 p~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~ 244 (523)
|.||++++.... .++..++|+|+||||+|+++++ ++...+....++..+||.+||+.|.+++.++ +.++
T Consensus 149 ~~aa~~~~~~~~----~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~i 217 (320)
T 2zgy_A 149 SIPAGYEVLQEL----DELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTKG 217 (320)
T ss_dssp SHHHHHHHHHHS----CTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBGG
T ss_pred cHHHHHhhhccc----cCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CCCC
Confidence 999999886322 2467899999999999999998 3444556667778999999999999888531 2111
Q ss_pred CCCHHHHHHHHHHHHHH-hhhcCCCceeEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcc
Q 009882 245 SGNPRALRRLRTACERA-KRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVH 323 (523)
Q Consensus 245 ~~~~~~~~~l~~~~e~~-K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~ 323 (523)
+ ...+|++ |.. .. .. ......+. .-..+++.+++++.++++.+.|.+.+++. .+++
T Consensus 218 --~-------~~~ae~~lk~~-~~--~~--~~~~~i~~-----~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~ 274 (320)
T 2zgy_A 218 --S-------SYLADDIIIHR-KD--NN--YLKQRIND-----ENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYT 274 (320)
T ss_dssp --G-------HHHHHHHHHTT-TC--HH--HHHHHSSS-----SCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCC
T ss_pred --C-------HHHHHHHHHHh-hh--hh--cccceecC-----chhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCC
Confidence 1 1234444 332 00 00 00000000 01345666777777777777777777652 4689
Q ss_pred eEEEecCccCcHHHHHHHHHhhCCc--ccccCCCCchhhHhHHHHHH
Q 009882 324 DVVLVGGSTRIPKVQQLLQDFFNGK--ELCKNINPDEAVAYGAAVQA 368 (523)
Q Consensus 324 ~ViLvGG~s~~p~v~~~l~~~f~~~--~v~~~~~p~~aVa~Gaa~~a 368 (523)
.|+|+||+|++ +++.|++.|+.. ++....||++|+|+||+++|
T Consensus 275 ~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 275 HVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp EEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred eEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 99999999997 999999999643 56778899999999999875
No 23
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.88 E-value=1.2e-22 Score=173.51 Aligned_cols=119 Identities=59% Similarity=0.892 Sum_probs=107.7
Q ss_pred ccceEeeecccCccceEeeCCEEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCccccccCcceeEEEEeCCCCC
Q 009882 379 VQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPA 458 (523)
Q Consensus 379 ~~~~~~~~~~~~s~gi~~~~~~~~~ii~~~~~lP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~~~~~ 458 (523)
.+++.+.|++|++||+++.++.+.+||+||++||++++..|++..|||+.+.|.+|||++..+.+|..||+|.|.++|++
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceEEEEEEecCCceEEEEEEEcCCCceeeEEcCCc
Q 009882 459 PRGVPQITVCFDIDANGILNVSAEDKTTAKRTRSQSPTT 497 (523)
Q Consensus 459 ~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~ 497 (523)
++|.++|+++|++|.||+|+|++.|..+|++..+++...
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~ 132 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS 132 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecC
Confidence 999999999999999999999999999999998887643
No 24
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.88 E-value=5.8e-22 Score=173.97 Aligned_cols=122 Identities=59% Similarity=0.886 Sum_probs=114.0
Q ss_pred eeecccCccceEeeCCEEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCccccccCcceeEEEEeCCCCCCCCcc
Q 009882 384 LLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVP 463 (523)
Q Consensus 384 ~~~~~~~s~gi~~~~~~~~~ii~~~~~lP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~~~~~~~~~~ 463 (523)
+.|++|++||+++.++.+.+||+||++||++++..|++..|||+.+.|.+|||++..+.+|..||+|.|.++|+.++|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCceEEEEEEEcCCCceeeEEcC-----CchhhHHHHH
Q 009882 464 QITVCFDIDANGILNVSAEDKTTAKRTRSQSP-----TTRVDCQRMK 505 (523)
Q Consensus 464 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 505 (523)
+|+|+|++|.||+|+|++.+..+|++..+++. ++.++++++.
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~ 128 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMI 128 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHH
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHH
Confidence 99999999999999999999999999887764 5778888763
No 25
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.85 E-value=2.2e-20 Score=174.76 Aligned_cols=120 Identities=44% Similarity=0.713 Sum_probs=113.1
Q ss_pred eecccCccceEeeCCEEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCccccccCcceeEEEEeCCCCCCCCcce
Q 009882 385 LDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQ 464 (523)
Q Consensus 385 ~~~~~~s~gi~~~~~~~~~ii~~~~~lP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~~~~~~~~~~~ 464 (523)
.|++|+++|+++.+|.+.+||+||++||++++..|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+|++|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCceEEEEEEEcCCCceeeEEcC----CchhhHHHH
Q 009882 465 ITVCFDIDANGILNVSAEDKTTAKRTRSQSP----TTRVDCQRM 504 (523)
Q Consensus 465 i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~----~~~~~~~~~ 504 (523)
|+|+|++|.||+|+|++.+..+|++..+++. ++.++++++
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~Ls~eei~~~ 124 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSEIASM 124 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSCCCHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEeccCCCHHHHHHH
Confidence 9999999999999999999999999888764 577888865
No 26
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.84 E-value=7.2e-22 Score=201.72 Aligned_cols=214 Identities=18% Similarity=0.192 Sum_probs=89.8
Q ss_pred cEEEEeCCCCCHHHHHHHHHH-HHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeE
Q 009882 130 NAVVTVPAYFNDSQRQATKDA-GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIF 208 (523)
Q Consensus 130 ~~VitVPa~~~~~qr~~l~~A-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~ 208 (523)
.+++|+|+.++..+|+++.++ .+.+|++.+.++.||.||+++++. .+.+|+|+|+|||+++.+. ++..
T Consensus 106 ~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~---------~~~lVVDiG~g~T~v~pv~--~G~~ 174 (394)
T 1k8k_B 106 KILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL---------LTGVVVDSGDGVTHICPVY--EGFS 174 (394)
T ss_dssp ---------------------------------------------------------CCEEEECSSCEEEECEE--TTEE
T ss_pred cEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC---------ceEEEEEcCCCceEeeeeE--CCEE
Confidence 589999999999999999885 578899999999999999998864 2459999999999998775 2322
Q ss_pred EEEEecCCCCCchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCc----------------eeE
Q 009882 209 EVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTA----------------QTT 272 (523)
Q Consensus 209 ~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~----------------~~~ 272 (523)
+........+||+++|+.|.+++.++. +......+. ..+|+.|+.++... ...
T Consensus 175 -~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~ 243 (394)
T 1k8k_B 175 -LPHLTRRLDIAGRDITRYLIKLLLLRG---YAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTVLVES 243 (394)
T ss_dssp -CSTTCEEESCCHHHHHHHHHHHHHHTT---CCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEE
T ss_pred -cccceEEeeccHHHHHHHHHHHHHhcC---CCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCcCceE
Confidence 111123458999999999999986541 111111122 34555566554321 122
Q ss_pred EEEecccCCeeeEEEEcHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCC--CCCcceEEEecCccCcHHHHHHHH
Q 009882 273 IEIDSLYEGIDFYSTITRARFE---ELNMDL-----FRKCMEPVEKCLRDAKMD--KSTVHDVVLVGGSTRIPKVQQLLQ 342 (523)
Q Consensus 273 ~~i~~~~~~~~~~~~itr~~~e---~~~~~~-----~~~~~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~~p~v~~~l~ 342 (523)
+.++ +|. .+.|+++.|+ -+++|. ...+.+.|.+.|.++... ..-.+.|+|+||+|++|.+.++|+
T Consensus 244 ~~lp---dg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~ 318 (394)
T 1k8k_B 244 YTLP---DGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLE 318 (394)
T ss_dssp EECT---TSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHH
T ss_pred EECC---CCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHH
Confidence 2222 232 3577887773 233332 245778888888877533 223678999999999999999998
Q ss_pred HhhCC------------------cccccCCCCchhhHhHHHHHHHH
Q 009882 343 DFFNG------------------KELCKNINPDEAVAYGAAVQAAI 370 (523)
Q Consensus 343 ~~f~~------------------~~v~~~~~p~~aVa~Gaa~~a~~ 370 (523)
+.+.. .++..+.+|..++.+|++++|..
T Consensus 319 ~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 319 RELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred HHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 76621 12333567889999999998874
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.81 E-value=5.9e-20 Score=184.09 Aligned_cols=206 Identities=14% Similarity=0.201 Sum_probs=137.5
Q ss_pred CcEEEEeCCCCCHHHH-HHHHHHHHHcCC------------ceeeeechhHHHHHhcccccccC--CCCCeEEEEEEeCC
Q 009882 129 KNAVVTVPAYFNDSQR-QATKDAGVIAGL------------NVMRIINEPTAAAIAYGLDKKAT--SVGEKNVLIFDLGG 193 (523)
Q Consensus 129 ~~~VitVPa~~~~~qr-~~l~~A~~~aGl------------~~~~li~Ep~Aaa~~~~~~~~~~--~~~~~~vlV~D~Gg 193 (523)
..+++++|..+...+| +++++++..++- ..+.+++||.||++++....... ...+..++|+|+||
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 3789999999988887 589998875542 46789999999999987643210 01367899999999
Q ss_pred cceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCceeEE
Q 009882 194 GTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTI 273 (523)
Q Consensus 194 gT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~~ 273 (523)
||||++++. ++.+. ....+...+||..+++++.+++.+++. +..+ +. ...++.+. .
T Consensus 194 gTtd~~v~~--~~~~~-~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l--~~-------~~i~~g~~---------~ 249 (355)
T 3js6_A 194 GTTIIDTYQ--NMKRV-EEESFVINKGTIDFYKRIASHVSKKSE---GASI--TP-------RMIEKGLE---------Y 249 (355)
T ss_dssp SCEEEEEEE--TTEEC-GGGCEEESCCHHHHHHHHHHHTC-------------CH-------HHHHSCCC----------
T ss_pred CcEEEEEEc--CCEEc-cccccCcchHHHHHHHHHHHHHHHhcC---CCcC--CH-------HHHhcCCc---------c
Confidence 999999993 33221 112334679999999999999977642 1111 11 11111111 0
Q ss_pred EEecccCCee--eEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHH--HHHHHHHhhCCcc
Q 009882 274 EIDSLYEGID--FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPK--VQQLLQDFFNGKE 349 (523)
Q Consensus 274 ~i~~~~~~~~--~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~--v~~~l~~~f~~~~ 349 (523)
. ..+.+ -...+ .+.+++.++++++++.+.|++.+.+ ...++.|+|+||+|.++. |.+.+++.|+..
T Consensus 250 ~----~~~~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~- 319 (355)
T 3js6_A 250 K----QCKLNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA- 319 (355)
T ss_dssp ----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-
T ss_pred c----cccccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC-
Confidence 0 00000 01122 2346666777777777777766643 356789999999999998 889999988542
Q ss_pred cccCCCCchhhHhHHHHHHHHHh
Q 009882 350 LCKNINPDEAVAYGAAVQAAILS 372 (523)
Q Consensus 350 v~~~~~p~~aVa~Gaa~~a~~~~ 372 (523)
.||.+|+|+|+..++..+.
T Consensus 320 ----~~p~~anA~G~~~~~~~~~ 338 (355)
T 3js6_A 320 ----DDSQFSNVRGYEKLGELLK 338 (355)
T ss_dssp ----SSGGGHHHHHHHHHHHHHH
T ss_pred ----CCcHHHHHHHHHHHHHHHH
Confidence 7999999999999988765
No 28
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.78 E-value=5e-18 Score=164.97 Aligned_cols=217 Identities=19% Similarity=0.174 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHhcccccccCCCCCe
Q 009882 105 AEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEK 184 (523)
Q Consensus 105 ~~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~ 184 (523)
+.++++.+|+.+++.+. ....++......... ..++......++||+|+++++..... .
T Consensus 35 ~~e~a~~vl~~~~~~a~----~~~~~~~~~a~t~~~-----------~~a~~~~~~~Vne~~aha~a~~~~~~------~ 93 (276)
T 4ehu_A 35 GTTGPSRVLEKLYGKTG----LAREDIKKVVVTGYG-----------RMNYSDADKQISELSCHARGVNFIIP------E 93 (276)
T ss_dssp TSSHHHHHHHHHHHHHC----CCGGGEEEEEEESTT-----------GGGCCSCSEECCHHHHHHHHHHHHST------T
T ss_pred CHHHHHHHHHHHHHHCC----CcchhccccccCchH-----------HHHhhCCCcccchHHHHHHHHHHhCC------C
Confidence 34566677777766553 222232222211111 23566778899999999988765433 2
Q ss_pred EEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhh
Q 009882 185 NVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRT 264 (523)
Q Consensus 185 ~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ 264 (523)
...|+|+|||+++++++. .++.++.....++...|+.+|++.+++++...+.... .+ +..++..
T Consensus 94 ~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~~~~------------~~---~~~a~~~ 157 (276)
T 4ehu_A 94 TRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVSELG------------SI---SMNSQNE 157 (276)
T ss_dssp CCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCGGGHH------------HH---HTTCSSC
T ss_pred CCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccChhhhH------------HH---HhcCCCC
Confidence 347899999999999885 4677888888888999999999999988754332110 00 0011100
Q ss_pred --cCCCceeEEE---EecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHH
Q 009882 265 --LSSTAQTTIE---IDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQ 339 (523)
Q Consensus 265 --Ls~~~~~~~~---i~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~ 339 (523)
++........ +....++ ...++++..+.+.+.+.+.....+. ..++.|+|+||.+++|.||+
T Consensus 158 ~~i~~~~~~f~~s~~~~~~~~~---------~~~~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~ 224 (276)
T 4ehu_A 158 VSISSTCTVFAESEVISHLSEN---------AKIEDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVR 224 (276)
T ss_dssp CCCCCCSHHHHHHHHHHHHHTT---------CCHHHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHH
T ss_pred CCcCCccchhhhhHHHHhhhcc---------ccHHHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHH
Confidence 0000000000 0000001 1134556666666655555544433 34678999999999999999
Q ss_pred HHHHhhCCcccccCCCCchhhHhHHHHHHHHHh
Q 009882 340 LLQDFFNGKELCKNINPDEAVAYGAAVQAAILS 372 (523)
Q Consensus 340 ~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~ 372 (523)
.+++.| +.++..+.+|++++|+|||++|....
T Consensus 225 ~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 225 AMAREI-NTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 999999 67888999999999999999997654
No 29
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.75 E-value=3.1e-19 Score=177.40 Aligned_cols=205 Identities=15% Similarity=0.178 Sum_probs=139.5
Q ss_pred CcEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CceeeeechhHHHHHhcccccccCCCCCeEEEEEEeC
Q 009882 129 KNAVVTVPAYFND--SQRQATKDAGVIA--------G------LNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLG 192 (523)
Q Consensus 129 ~~~VitVPa~~~~--~qr~~l~~A~~~a--------G------l~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~G 192 (523)
..+++++|..+.. .+|+.+++..+.- | +..+.+++||.+|.+.+. . ..++..++|+|+|
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~-~----~~~~~~v~vvDiG 180 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ-E----NFKNKNVAVIDFG 180 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC-C----CCTTCEEEEEEEC
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc-h----hhccCCEEEEEeC
Confidence 4789999988774 3688888766521 1 134778899998887652 1 1256789999999
Q ss_pred CcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCceeE
Q 009882 193 GGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTT 272 (523)
Q Consensus 193 ggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~ 272 (523)
|||||++++. ++.+ +....+...+||.++++.+.+++.+ .+++..+.. ..+|++|+. .. .
T Consensus 181 ggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~---------~~~e~i~~~--g~--~- 240 (329)
T 4apw_A 181 GLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITN---------EQAESALNN--GY--M- 240 (329)
T ss_dssp SSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTS---------BTTTTCSSS--CS--S-
T ss_pred CCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCH---------HHHHHHHhc--CC--c-
Confidence 9999999998 3332 2223345679999999999987755 023332221 133444443 11 0
Q ss_pred EEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCccccc
Q 009882 273 IEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCK 352 (523)
Q Consensus 273 ~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~ 352 (523)
..+.+. ..+..+++++.++++++++.+.+++. +.+...++.|+|+||+|.+ +.+.+++.|+ .++..
T Consensus 241 ------~~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~-~~v~v 306 (329)
T 4apw_A 241 ------KKGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYP-NNSII 306 (329)
T ss_dssp ------CEECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHST-TCEEC
T ss_pred ------ccCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcC-CCCEe
Confidence 001111 13456777777777777777777665 3444558999999999998 6799999995 35667
Q ss_pred CCCCchhhHhHHHHHHHHHh
Q 009882 353 NINPDEAVAYGAAVQAAILS 372 (523)
Q Consensus 353 ~~~p~~aVa~Gaa~~a~~~~ 372 (523)
..||..|+|+|+..++...-
T Consensus 307 ~~~P~~a~a~G~~~~~~~k~ 326 (329)
T 4apw_A 307 TNNSQWTTCEGLYKVAVAKY 326 (329)
T ss_dssp CSSGGGHHHHHHHHHHHHHH
T ss_pred cCCChhhHHHHHHHHHhhhh
Confidence 88999999999998876543
No 30
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.65 E-value=1.2e-16 Score=163.54 Aligned_cols=243 Identities=16% Similarity=0.122 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCC--CCcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHhcccccccCCCCC
Q 009882 107 EISSMVLIKMREIAEAYLGST--IKNAVVTVPAYFNDSQRQATKDAG-VIAGLNVMRIINEPTAAAIAYGLDKKATSVGE 183 (523)
Q Consensus 107 ~v~~~~l~~l~~~a~~~~~~~--~~~~VitVPa~~~~~qr~~l~~A~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~ 183 (523)
+....+++|+.. +.++.. -..+++|.|+..+...|+.+.+++ +..|++.+.++.+|.+|+++.+..... ....
T Consensus 103 d~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~-~~~~ 178 (427)
T 3dwl_A 103 DHMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKV-TDRS 178 (427)
T ss_dssp HHHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTT-CSCC
T ss_pred HHHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccc-cCCC
Confidence 344555555443 223322 247899999999999999998877 789999999999999999988743210 0112
Q ss_pred eEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhh
Q 009882 184 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKR 263 (523)
Q Consensus 184 ~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~ 263 (523)
.+-||+|+|+|+|+++.+. .+ . -+........+||+++|+.|.+++.++... ..-...+|+.|+
T Consensus 179 ~tglVVDiG~g~T~v~PV~-~G-~-~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~-------------~~~~~~~~~IKe 242 (427)
T 3dwl_A 179 LTGTVVDSGDGVTHIIPVA-EG-Y-VIGSSIKTMPLAGRDVTYFVQSLLRDRNEP-------------DSSLKTAERIKE 242 (427)
T ss_dssp CCEEEEEESSSCEEEEEEE-TT-E-ECGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHH
T ss_pred ceEEEEECCCCceEEEEEE-CC-E-EehhhheeccccHHHHHHHHHHHHHHcCCC-------------chhHHHHHHHHH
Confidence 4579999999999999984 22 1 111112234799999999999988665431 001244566666
Q ss_pred hcCCCcee-----------EEEEec--c--cCCeeeEEEEcHHHH---HHHHHHH------HHHHHHHHHHHHHHcCCCC
Q 009882 264 TLSSTAQT-----------TIEIDS--L--YEGIDFYSTITRARF---EELNMDL------FRKCMEPVEKCLRDAKMDK 319 (523)
Q Consensus 264 ~Ls~~~~~-----------~~~i~~--~--~~~~~~~~~itr~~~---e~~~~~~------~~~~~~~i~~~l~~~~~~~ 319 (523)
.++..... ...+.. + .+|....+.+..++| |-+++|- ...+.+.|.+.|.++..+.
T Consensus 243 ~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dl 322 (427)
T 3dwl_A 243 ECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDV 322 (427)
T ss_dssp HHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHH
T ss_pred hcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHH
Confidence 65442110 000110 1 233334566777776 3344441 2457788888887664321
Q ss_pred --CCcceEEEecCccCcHHHHHHHHHhh----C---------------C--cccccCCCCchhhHhHHHHHHH
Q 009882 320 --STVHDVVLVGGSTRIPKVQQLLQDFF----N---------------G--KELCKNINPDEAVAYGAAVQAA 369 (523)
Q Consensus 320 --~~i~~ViLvGG~s~~p~v~~~l~~~f----~---------------~--~~v~~~~~p~~aVa~Gaa~~a~ 369 (523)
.-..+|+|+||+|.+|.+.++|++.+ + . .++..+.++..++=+|++++|.
T Consensus 323 r~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 323 RKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 11467999999999999999988754 1 1 2234445677899999999986
No 31
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.65 E-value=1.1e-15 Score=158.07 Aligned_cols=174 Identities=15% Similarity=0.153 Sum_probs=117.3
Q ss_pred CCCCEEEEEccccceEEEEE-------ecceEEEEcCC----ceEecHhhHhhhhhCcCchhhhchhhcCCCCCChhhhc
Q 009882 5 GEGPAIGIDLGTTYSCVGVW-------TTPSYVGFTDT----ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQG 73 (523)
Q Consensus 5 ~~~~vvGID~GTt~s~va~~-------~~Ps~v~~~~~----~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~ 73 (523)
.+...|+||+||.++++++. .+||+|+.... ..++|+++.... +. ...+
T Consensus 21 de~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~~~~~~vG~e~~~~~---r~--~l~l--------------- 80 (498)
T 3qb0_A 21 DEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADEGNKKIFSEQSIGIP---RK--DYEL--------------- 80 (498)
T ss_dssp CCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCSSCCEECCTTGGGSC---CT--TEEE---------------
T ss_pred CCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCCCccEEEecHHHhcC---cC--ceEE---------------
Confidence 45567999999999999987 68999987532 357777532210 00 0001
Q ss_pred cccccCeEEEecCCCCceEEEEEcCCceeeeHHHHHHHHHHHHHHHHHHHhCCC--CC-cEEEEeCCCCCHHHHHHHHHH
Q 009882 74 DMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGST--IK-NAVVTVPAYFNDSQRQATKDA 150 (523)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~l~~l~~~a~~~~~~~--~~-~~VitVPa~~~~~qr~~l~~A 150 (523)
.+|++ + ..+.--+....+++|+... .++.. -. .+++|.|+......|+.+.++
T Consensus 81 ---~~Pi~-----~-------------GvI~dwd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re~~~ei 136 (498)
T 3qb0_A 81 ---KPIIE-----N-------------GLVIDWDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRKKSLEV 136 (498)
T ss_dssp ---EESEE-----T-------------TEESCHHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHHHHHHH
T ss_pred ---eccCc-----C-------------CEEccHHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHHHHHHH
Confidence 11221 0 0122234455566665532 23322 22 589999999999999999886
Q ss_pred -HHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHH
Q 009882 151 -GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMV 229 (523)
Q Consensus 151 -~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~ 229 (523)
++..|++.+.++.+|.||+++++.. +-||+|+|+|+|+++.+. .|.. +........+||+++|+.|.
T Consensus 137 lFE~f~vpav~l~~~~vlalya~G~~---------tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~lt~~L~ 204 (498)
T 3qb0_A 137 LLEGMQFEACYLAPTSTCVSFAAGRP---------NCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKFINHLIK 204 (498)
T ss_dssp HHTTSCCSEEEEEEHHHHHHHHHTCS---------SEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHHHHHHHH
T ss_pred HHhhcCCCeEeecchHHHHHHHcCCC---------eEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHHHHHHHH
Confidence 4889999999999999999988652 239999999999999986 2211 11112235799999999999
Q ss_pred HHHHH
Q 009882 230 NHFVQ 234 (523)
Q Consensus 230 ~~l~~ 234 (523)
++|.+
T Consensus 205 ~lL~~ 209 (498)
T 3qb0_A 205 KALEP 209 (498)
T ss_dssp HHTTT
T ss_pred HHHHh
Confidence 98854
No 32
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.45 E-value=5e-12 Score=136.02 Aligned_cols=118 Identities=16% Similarity=0.211 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHH-HHHhCCCCC-----cEEEEeCCCCCHHHHHHHHHH-HHHcCCceeeeechhHHHHHhcccccc
Q 009882 105 AEEISSMVLIKMREIA-EAYLGSTIK-----NAVVTVPAYFNDSQRQATKDA-GVIAGLNVMRIINEPTAAAIAYGLDKK 177 (523)
Q Consensus 105 ~~~v~~~~l~~l~~~a-~~~~~~~~~-----~~VitVPa~~~~~qr~~l~~A-~~~aGl~~~~li~Ep~Aaa~~~~~~~~ 177 (523)
..+....+- .|.+++ .+.++.... .+++|.|..++...|+.|.+. .+..|++.+.+..++.||+++++..
T Consensus 170 ~~~~wdd~e-~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~-- 246 (593)
T 4fo0_A 170 LTAVLADIE-VIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS-- 246 (593)
T ss_dssp HHHHHHHHH-HHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS--
T ss_pred hhcCHHHHH-HHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC--
Confidence 444444433 333333 355665443 399999999999999999774 6778999999999999999988654
Q ss_pred cCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHH
Q 009882 178 ATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQE 235 (523)
Q Consensus 178 ~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~ 235 (523)
+-+|||+|.+.|.++-+.-+- -+........+||+++++.|.++|..+
T Consensus 247 -------tglVVDiG~~~T~v~PV~dG~---~l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 247 -------STCIVDVGDQKTSVCCVEDGV---SHRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp -------EEEEEEECSSCEEEEEEESSC---BCGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred -------ceEEEEeCCCceeeeeeECCE---EehhheEEecccHHHHHHHHHHHHHhc
Confidence 359999999999999886221 111122234799999999999888653
No 33
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.35 E-value=5.5e-12 Score=127.51 Aligned_cols=197 Identities=21% Similarity=0.208 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHHHc-CC--ceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCC
Q 009882 141 DSQRQATKDAGVIA-GL--NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDT 217 (523)
Q Consensus 141 ~~qr~~l~~A~~~a-Gl--~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~ 217 (523)
..+-+.+.++.+.+ |+ ++-. .||.||+++.....+ .+..+.++|+||||||++++.-+. +.+....
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE----~eLGvaiIDmGGGTTd~sVf~~G~-----lv~a~~i 435 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG----TTRPLAILDLGAGSTDASIINPKG-----DIIATHL 435 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT----CCSSEEEEEECSSEEEEEEECTTC-----CEEEEEE
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC----CcCCeEEEEeCCCcceEEEEcCCc-----EEEEEEe
Confidence 34567888899999 99 6555 999999999887666 567899999999999999998655 4444556
Q ss_pred CCchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCC----------ceeEEEE--ecccCC---e
Q 009882 218 HLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSST----------AQTTIEI--DSLYEG---I 282 (523)
Q Consensus 218 ~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~----------~~~~~~i--~~~~~~---~ 282 (523)
..||++++..|..-|.-. + +..||+.|+ .... +...+.+ +.+... .
T Consensus 436 p~gG~~VT~DIA~~Lgt~-----------d-------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~R 496 (610)
T 2d0o_A 436 AGAGDMVTMIIARELGLE-----------D-------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFAR 496 (610)
T ss_dssp ECSHHHHHHHHHHHHTCC-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTC
T ss_pred ccchHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeee
Confidence 799999999998766211 0 257899998 4221 1223444 222110 1
Q ss_pred ------eeEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CCCCcceEEEecCccCcHHHHHHHHHhhCC
Q 009882 283 ------DFYSTITRAR--FEELNMDLFRKCMEP--VEKCLRDAKM-----DKSTVHDVVLVGGSTRIPKVQQLLQDFFNG 347 (523)
Q Consensus 283 ------~~~~~itr~~--~e~~~~~~~~~~~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~ 347 (523)
+.-..| +.+ +|+ ++-+-+++.+. +..+|++.+. +..+|..|+|+||+|+++.+.+..++.|+.
T Consensus 497 v~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~ 574 (610)
T 2d0o_A 497 VCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAH 574 (610)
T ss_dssp EEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTT
T ss_pred eecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCc
Confidence 112355 566 777 65555555443 3334554432 234579999999999999999999999954
Q ss_pred cc-------cccCCCCchhhHhHHHHHHH
Q 009882 348 KE-------LCKNINPDEAVAYGAAVQAA 369 (523)
Q Consensus 348 ~~-------v~~~~~p~~aVa~Gaa~~a~ 369 (523)
-+ ......|..|+|.|.++|.+
T Consensus 575 y~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 575 YRLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp SSCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred CCeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 12 12245899999999998764
No 34
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.35 E-value=4.4e-12 Score=128.69 Aligned_cols=195 Identities=22% Similarity=0.198 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHc-CC--ceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCC
Q 009882 143 QRQATKDAGVIA-GL--NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHL 219 (523)
Q Consensus 143 qr~~l~~A~~~a-Gl--~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~l 219 (523)
+-+.+.++.+.+ |+ ++-. .||.||+++.....+ .+..+.++|+||||||++++.-+. +.+......
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE----~elGvaiIDmGgGTTd~sVf~~g~-----lv~a~~ip~ 439 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG----CAAPLAILDLGAGSTDAAIVNAEG-----QITAVHLAG 439 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT----CCSSEEEEEECSSEEEEEEECSSS-----CEEEEEEEC
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC----CcCCeEEEEeCCCcceEEEEcCCc-----EEEEEEecc
Confidence 346678888888 99 5555 999999999887666 567899999999999999998665 444555689
Q ss_pred chHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCC----------ceeEEEE--ecccCC---e--
Q 009882 220 GGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSST----------AQTTIEI--DSLYEG---I-- 282 (523)
Q Consensus 220 GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~----------~~~~~~i--~~~~~~---~-- 282 (523)
||++++..|..-|.-. + +..||+.|+ .... ....+.+ +.+... .
T Consensus 440 gG~~VT~DIA~~Lg~~-----------d-------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~ 500 (607)
T 1nbw_A 440 AGNMVSLLIKTELGLE-----------D-------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVV 500 (607)
T ss_dssp CHHHHHHHHHHHHTCS-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEE
T ss_pred chHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeee
Confidence 9999999998766221 0 257899998 4221 1223444 222110 1
Q ss_pred ----eeEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCCC-----CCcceEEEecCccCcHHHHHHHHHhhCCcc
Q 009882 283 ----DFYSTITRAR--FEELNMDLFRKCMEP--VEKCLRDAKMDK-----STVHDVVLVGGSTRIPKVQQLLQDFFNGKE 349 (523)
Q Consensus 283 ----~~~~~itr~~--~e~~~~~~~~~~~~~--i~~~l~~~~~~~-----~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~ 349 (523)
+.-..| +.+ +|+ ++-+-+++.+. +..+|++.+... .+|..|+|+||+|+++.+.+..++.|+.-+
T Consensus 501 ~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~ 578 (607)
T 1nbw_A 501 YIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYG 578 (607)
T ss_dssp EEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTT
T ss_pred cccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCC
Confidence 112255 566 776 55555555443 455577766533 356899999999999999999999994311
Q ss_pred -------cccCCCCchhhHhHHHHHHH
Q 009882 350 -------LCKNINPDEAVAYGAAVQAA 369 (523)
Q Consensus 350 -------v~~~~~p~~aVa~Gaa~~a~ 369 (523)
......|..|+|.|.++|.+
T Consensus 579 VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 579 VVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp CEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred eEEecCCccccCCchHHHHHHHHHhhh
Confidence 12245899999999998753
No 35
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.94 E-value=1e-08 Score=98.43 Aligned_cols=171 Identities=19% Similarity=0.218 Sum_probs=98.1
Q ss_pred eeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHHH
Q 009882 159 MRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKR 238 (523)
Q Consensus 159 ~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~ 238 (523)
..+++|++|.+.+...... ..+ .|+|+||+++.+..+ .++.+.-......+..|+-.+-+.+++.+
T Consensus 77 ~~~v~Ei~ah~~ga~~~~~----~~~--~vidiGGqd~k~i~~--~~g~v~~~~mn~~ca~GtG~~le~~a~~l------ 142 (270)
T 1hux_A 77 DKQMSELSCHAMGASFIWP----NVH--TVIDIGGQDVKVIHV--ENGTMTNFQMNDKCAAGTGRFLDVMANIL------ 142 (270)
T ss_dssp SEEECHHHHHHHHHHHHCT----TCC--EEEEEETTEEEEEEE--ETTEEEEEEEESSCCTTSHHHHHHHHHHH------
T ss_pred CCCcccHHHHHHHHHHhCC----CCC--EEEEECCCceEEEEE--eCCceeeeccccccchhhHHHHHHHHHHh------
Confidence 4679999999865422222 111 589999998888777 45655333344434445444444444433
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHHhhhcCCCceeEEEEecccCCeeeEEEEcHHHH----------HHHHHHHHHHHHHHH
Q 009882 239 KNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARF----------EELNMDLFRKCMEPV 308 (523)
Q Consensus 239 ~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~----------e~~~~~~~~~~~~~i 308 (523)
+.++. .+-+.+.+.+..+.....+. .+.+.++ ++++..+++.+...+
T Consensus 143 --g~~~~-------el~~la~~~~~p~~~~~~c~--------------vfa~s~v~~l~~~g~~~~di~~av~e~Va~~i 199 (270)
T 1hux_A 143 --EVKVS-------DLAELGAKSTKRVAISSTCT--------------VFAESEVISQLSKGTDKIDIIAGIHRSVASRV 199 (270)
T ss_dssp --TCCTT-------THHHHHTTCCSCCCCCCCSH--------------HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred --CCCHH-------HHHHHHhhCCCCCCcccccc--------------hhHhHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Confidence 22211 11111111111110000000 0112222 344445555555545
Q ss_pred HHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHH
Q 009882 309 EKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAIL 371 (523)
Q Consensus 309 ~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~ 371 (523)
.+.++..+. .+.|+++||.+++|.+++.+++.+ +.++..+.+|+.+.|+|||++|...
T Consensus 200 ~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 200 IGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHh
Confidence 455543321 367999999999999999999999 6778888888889999999998764
No 36
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=98.20 E-value=3.5e-06 Score=88.25 Aligned_cols=123 Identities=17% Similarity=0.240 Sum_probs=87.8
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCe
Q 009882 129 KNAVVTVPAYFNDSQRQATKDAG-VIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGI 207 (523)
Q Consensus 129 ~~~VitVPa~~~~~qr~~l~~A~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~ 207 (523)
..+++|.|+.++...|+.+.+++ +..|++.+.++.+|.||+++++. ..+-||+|+|+|+|+++.+. . |
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl--------~ttGLVVDiG~g~T~VvPV~-e-G- 290 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI--------STSTCVVNIGAAETRIACVD-E-G- 290 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC--------SSCEEEEEECSSCEEEEEEE-T-T-
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC--------CCceEEEcCCCceEEEEEEe-C-C-
Confidence 36999999999999999998876 56999999999999999998764 12459999999999999985 2 2
Q ss_pred EEEEEecCCCCCchHHHHHHHHHHHHHHHHHhcCC-CCCCCHHHHHHHHHHHHHHhhhcCCC
Q 009882 208 FEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKK-DISGNPRALRRLRTACERAKRTLSST 268 (523)
Q Consensus 208 ~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~e~~K~~Ls~~ 268 (523)
+-+........+||+++|+.|.+++.++- +.. +...+... =...++.+|+.++.-
T Consensus 291 ~vl~~ai~rL~iGG~dLT~yL~kLL~~rg---ypy~~~~f~t~~---e~eiVrdIKEk~CyV 346 (655)
T 4am6_A 291 TVLEHSAITLDYGGDDITRLFALFLLQSD---FPLQDWKIDSKH---GWLLAERLKKNFTTF 346 (655)
T ss_dssp EECGGGCEEESCCHHHHHHHHHHHHHHTT---CSCCSCCTTSHH---HHHHHHHHHHHHCCC
T ss_pred EEEhhheeeecchHHHHHHHHHHHHHHcC---CCccccCCCCcc---hHHHHHHHHHheEEE
Confidence 11111122358999999999999886541 100 11111111 134577788887665
No 37
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.78 E-value=0.00023 Score=68.10 Aligned_cols=47 Identities=17% Similarity=0.198 Sum_probs=41.5
Q ss_pred cceEEEecC-ccCcHHHHHHHHHhh--CCcccccCCCCchhhHhHHHHHH
Q 009882 322 VHDVVLVGG-STRIPKVQQLLQDFF--NGKELCKNINPDEAVAYGAAVQA 368 (523)
Q Consensus 322 i~~ViLvGG-~s~~p~v~~~l~~~f--~~~~v~~~~~p~~aVa~Gaa~~a 368 (523)
++.|+++|| .+..|.+++.+++.+ .+.++..+.+|+.+.|.|||+++
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHHHHTC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHHHHhC
Confidence 557999999 899999999999974 46788889999999999999863
No 38
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.73 E-value=0.00032 Score=68.89 Aligned_cols=152 Identities=17% Similarity=0.183 Sum_probs=88.5
Q ss_pred EEEEEEeCCcceEEEEEEEe-CCeEEEEEecCCCCCchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhh
Q 009882 185 NVLIFDLGGGTFDVSLLTIE-EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKR 263 (523)
Q Consensus 185 ~vlV~D~GggT~Dvsv~~~~-~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~ 263 (523)
.+||+|+|+|+ +++++. ++.++...- ..+||-.|=.... .+... .+ ...+.+.+.+...
T Consensus 176 PyllVnIGsGv---Siikv~~~~~f~rvgG---~siGGGTflGL~~-lLtg~----------~~---~dEl~~lA~~Gd~ 235 (360)
T 2i7n_A 176 PMLLVNMGSGV---SILAVYSKDNYKRVTG---TSLGGGTFLGLCC-LLTGC----------ET---FEEALEMAAKGDS 235 (360)
T ss_dssp SEEEEEESSSE---EEEEEEETTEEEEEEE---ESCSHHHHHHHHH-HHHCC----------CS---HHHHHHHHHHCCG
T ss_pred ceEEEEeCCCc---EEEEEcCCCCEEEecc---ccCccHhHHHHHH-HHhCC----------CC---HHHHHHHHHcCCC
Confidence 48899999988 778877 445554332 4578877765554 33110 01 2333344433322
Q ss_pred h------------------cCCCceeEEEEecccCCeee--EEEEcHHHHHHHHHHHHHHHHHHHHHHH----HHcCCCC
Q 009882 264 T------------------LSSTAQTTIEIDSLYEGIDF--YSTITRARFEELNMDLFRKCMEPVEKCL----RDAKMDK 319 (523)
Q Consensus 264 ~------------------Ls~~~~~~~~i~~~~~~~~~--~~~itr~~~e~~~~~~~~~~~~~i~~~l----~~~~~~~ 319 (523)
. |+.+..+. ++.+-... .-..++ |+++..++.-+.+.|-... +..+
T Consensus 236 ~~vDllV~DIYg~~y~~~gL~~~~~AS----sFGk~~~~~~~~~~~~---eDIa~gll~sVa~~I~~lA~l~A~~~~--- 305 (360)
T 2i7n_A 236 TNVDKLVKDIYGGDYERFGLQGSAVAS----SFGNMMSKEKRDSISK---EDLARATLVTITNNIGSIARMCALNEN--- 305 (360)
T ss_dssp GGTSEEHHHHHSSCBGGGTBCTTSEEE----TTTTTTSHHHHTTCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred CcccceeeecccCcccccCCCccceee----hhhhHhhHhhhcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHcC---
Confidence 1 33332222 11111000 001223 4445555555554444332 3333
Q ss_pred CCcceEEEecC-ccCcHHHHHHHHHhh-----CCcccccCCCCchhhHhHHHHHH
Q 009882 320 STVHDVVLVGG-STRIPKVQQLLQDFF-----NGKELCKNINPDEAVAYGAAVQA 368 (523)
Q Consensus 320 ~~i~~ViLvGG-~s~~p~v~~~l~~~f-----~~~~v~~~~~p~~aVa~Gaa~~a 368 (523)
++.|+++|| .+..|.+++.|++.+ ++.++..+.+|+.+-|+|||+.+
T Consensus 306 --i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 --IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp --CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred --CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 457999999 999999999999986 34677888899999999999875
No 39
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=97.30 E-value=0.00051 Score=66.95 Aligned_cols=79 Identities=15% Similarity=0.109 Sum_probs=52.7
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHH
Q 009882 144 RQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 223 (523)
Q Consensus 144 r~~l~~A~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~ 223 (523)
...+.++-+..|++...+-.|.+|...+.+...... .....+|+|+|||+|.+++.+ ++.+. ...+..+|+..
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~--~~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~~G~v~ 172 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK--PEGEVCVVDQGGGSTEYVFGK--GYKVR---EVISLPIGIVN 172 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC--CCSEEEEEEEETTEEEEEEEE--TTEEE---EEEEECCCHHH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc--cCCCEEEEEeCCCcEEEEEEe--CCcee---eEEEEeccHHH
Confidence 344555555789998766677777655544333211 245699999999999999976 33332 23346899998
Q ss_pred HHHHHH
Q 009882 224 FDNRMV 229 (523)
Q Consensus 224 id~~l~ 229 (523)
+.+.+.
T Consensus 173 l~e~~~ 178 (315)
T 1t6c_A 173 LTETFF 178 (315)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 887753
No 40
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.21 E-value=0.15 Score=48.81 Aligned_cols=50 Identities=16% Similarity=0.230 Sum_probs=38.5
Q ss_pred CcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHH
Q 009882 321 TVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAIL 371 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~ 371 (523)
+++.|+|.||.+..+.+.+.+++.+...++..+. .+.+.+.||+.++...
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYKE 288 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHHh
Confidence 3568999999887788888888877544565555 6688999999887643
No 41
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=97.20 E-value=0.025 Score=55.12 Aligned_cols=89 Identities=19% Similarity=0.288 Sum_probs=50.6
Q ss_pred eHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHH----------------HHHHHHHHHHHcCCceeeeechhHH
Q 009882 104 AAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDS----------------QRQATKDAGVIAGLNVMRIINEPTA 167 (523)
Q Consensus 104 ~~~~v~~~~l~~l~~~a~~~~~~~~~~~VitVPa~~~~~----------------qr~~l~~A~~~aGl~~~~li~Ep~A 167 (523)
+++++...+.+.+.+..+. .++..+.|++|...+.. -++.+.+ ..|++ +.+.++..|
T Consensus 36 ~~~~~~~~i~~~i~~~~~~---~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~---~~~~p-v~v~NDa~a 108 (321)
T 3vgl_A 36 TAEGIVDAICAAVAGASEG---HDVEAVGIGAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQ---RVGLP-VVVENDANA 108 (321)
T ss_dssp SHHHHHHHHHHHHHHHHTT---CCEEEEEEEESSEECTTSSCEEECSSSCCEEECHHHHHHH---HHCSC-EEEEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHhh---cCceEEEEeccccEeCCCCEEEeCCCCCCcCCCHHHHHhh---hhCCC-EEEEehhhh
Confidence 3455555554444443321 24556677777654322 1334443 34776 689999999
Q ss_pred HHHhcccccccCCCCCeEEEEEEeCCcceEEEEEE
Q 009882 168 AAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (523)
Q Consensus 168 aa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (523)
+|++-..... ....++++++-+|.| +-.+++.
T Consensus 109 aal~E~~~g~--~~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 109 AAWGEYRFGA--GQGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HHHHHHHHST--TTTCSSEEEEEESSS-EEEEEEE
T ss_pred HHHHHHHhCC--CCCCCCEEEEEeCcc-eEEEEEE
Confidence 9987432211 123457888899988 5555554
No 42
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=97.12 E-value=0.12 Score=50.38 Aligned_cols=47 Identities=21% Similarity=0.199 Sum_probs=33.0
Q ss_pred cceEEEecCccCcHHHHHHHHHhhCC--------cccccCCCCchhhHhHHHHHH
Q 009882 322 VHDVVLVGGSTRIPKVQQLLQDFFNG--------KELCKNINPDEAVAYGAAVQA 368 (523)
Q Consensus 322 i~~ViLvGG~s~~p~v~~~l~~~f~~--------~~v~~~~~p~~aVa~Gaa~~a 368 (523)
++.|+|-||.+..+.+.+.+++.+.. .++....-.+.+.++|||.++
T Consensus 270 p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 270 PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 56899999999887777777776521 223333345678999999754
No 43
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.95 E-value=0.018 Score=56.22 Aligned_cols=48 Identities=19% Similarity=0.178 Sum_probs=33.8
Q ss_pred cceEEEecCccCc-HHHHHHHHHhh---------CCcccccCCCCchhhHhHHHHHHH
Q 009882 322 VHDVVLVGGSTRI-PKVQQLLQDFF---------NGKELCKNINPDEAVAYGAAVQAA 369 (523)
Q Consensus 322 i~~ViLvGG~s~~-p~v~~~l~~~f---------~~~~v~~~~~p~~aVa~Gaa~~a~ 369 (523)
++.|+|.||.++. +.+.+.|++.+ ...++......+.+.++|||.++.
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 5789999999886 66666655543 123455555667899999998764
No 44
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=96.92 E-value=0.35 Score=47.31 Aligned_cols=83 Identities=4% Similarity=-0.039 Sum_probs=52.1
Q ss_pred eHHHHHHHHHHHHHHHHHHHh--CC-CCCcEEEEeCCCCCHHHHHHHHHHHHHc-C--CceeeeechhHHHHHhcccccc
Q 009882 104 AAEEISSMVLIKMREIAEAYL--GS-TIKNAVVTVPAYFNDSQRQATKDAGVIA-G--LNVMRIINEPTAAAIAYGLDKK 177 (523)
Q Consensus 104 ~~~~v~~~~l~~l~~~a~~~~--~~-~~~~~VitVPa~~~~~qr~~l~~A~~~a-G--l~~~~li~Ep~Aaa~~~~~~~~ 177 (523)
.++++...+...+.+..++.. .. ++..+.|++|...+......+++..+.. | .-.+.+.++..|||+++ . .
T Consensus 44 ~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~--~ 120 (347)
T 2ch5_A 44 GTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T--P 120 (347)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C--S
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C--C
Confidence 445555555555555444321 12 4678899999999877666666665543 3 13578999999999884 2 1
Q ss_pred cCCCCCeEEEEEEeCCcc
Q 009882 178 ATSVGEKNVLIFDLGGGT 195 (523)
Q Consensus 178 ~~~~~~~~vlV~D~GggT 195 (523)
.+.+++=+|.|.
T Consensus 121 ------~~~v~v~~GTGi 132 (347)
T 2ch5_A 121 ------DGGVVLISGTGS 132 (347)
T ss_dssp ------SCEEEEEESSSE
T ss_pred ------CCcEEEEEcCCc
Confidence 234555566654
No 45
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.71 E-value=0.0041 Score=65.68 Aligned_cols=84 Identities=14% Similarity=0.182 Sum_probs=59.3
Q ss_pred EcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHH
Q 009882 288 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQ 367 (523)
Q Consensus 288 itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~ 367 (523)
-++.++-.++.-+++.+.-.++..++........++.|.++||+++++.+.+.+.+.| +.++..+ ...++.|+|||+.
T Consensus 409 ~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGAA~l 486 (554)
T 3l0q_A 409 TTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLGSAMM 486 (554)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHHHHHH
Confidence 3677774434455555544444443332112235789999999999999999999999 6777765 4567999999999
Q ss_pred HHHHhC
Q 009882 368 AAILSG 373 (523)
Q Consensus 368 a~~~~~ 373 (523)
|+.-.|
T Consensus 487 A~~a~G 492 (554)
T 3l0q_A 487 GTVAAG 492 (554)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 987654
No 46
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.67 E-value=0.0034 Score=65.18 Aligned_cols=76 Identities=22% Similarity=0.221 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 297 NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 297 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
++-+++.+.-.+...++........++.|.++||+++++.+.+.+.+.+ +.++..+..++.+.|+|||+.|+.-.|
T Consensus 362 ~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~lA~~~~g 437 (484)
T 2itm_A 362 ARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLAQIAAN 437 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHHHHHHcC
Confidence 3444444444333333332212234778999999999999999999999 678877665555689999999987654
No 47
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.59 E-value=0.0056 Score=64.36 Aligned_cols=78 Identities=13% Similarity=0.111 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 294 EELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 294 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
..+++-+++.+.-.+...++..+.....++.|.++||+++++.+.+.+.+.| +.++..+ .+.++.|+|||+.|+.-.|
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHhC
Confidence 4445556666665566666665544456789999999999999999999999 6777665 4578999999999986553
No 48
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.59 E-value=0.0052 Score=63.99 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 296 LNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 296 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
+++-+++.+.-.+...++...... .++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.|
T Consensus 369 l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~g 443 (497)
T 2zf5_O 369 LARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYLAGLAVD 443 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHHHHHHhC
Confidence 344555555555555555543333 5788999999999999999999999 6777665 4456999999999986554
No 49
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.57 E-value=0.27 Score=46.88 Aligned_cols=49 Identities=18% Similarity=0.116 Sum_probs=33.5
Q ss_pred cceEEEecCccCcHHHHHHHHHhhC-----------CcccccCCCCchhhHhHHHHHHHH
Q 009882 322 VHDVVLVGGSTRIPKVQQLLQDFFN-----------GKELCKNINPDEAVAYGAAVQAAI 370 (523)
Q Consensus 322 i~~ViLvGG~s~~p~v~~~l~~~f~-----------~~~v~~~~~p~~aVa~Gaa~~a~~ 370 (523)
++.|+|.||.+..+.+.+.+++.+. ..++....-.+.+.++|||.++..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 5689999998877777776665441 123343444567899999988754
No 50
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.47 E-value=0.0067 Score=63.23 Aligned_cols=51 Identities=18% Similarity=0.171 Sum_probs=44.1
Q ss_pred CcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 321 TVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
.++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.|
T Consensus 393 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 443 (504)
T 3ll3_A 393 KPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFLARQALG 443 (504)
T ss_dssp CCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHHHHHHcC
Confidence 5889999999999999999999999 6777665 4567999999999987654
No 51
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.45 E-value=0.0049 Score=64.39 Aligned_cols=51 Identities=29% Similarity=0.511 Sum_probs=43.5
Q ss_pred CcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 321 TVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
.++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.+
T Consensus 424 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G 474 (515)
T 3i8b_A 424 SITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAARQAAWVLS 474 (515)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHHHHHHHHcC
Confidence 4789999999999999999999999 6777665 4567889999999986554
No 52
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=96.39 E-value=0.73 Score=44.14 Aligned_cols=49 Identities=27% Similarity=0.213 Sum_probs=31.7
Q ss_pred cceEEEecCcc-Cc-HHHHHHHHHhhC-------CcccccCCCCchhhHhHHHHHHHH
Q 009882 322 VHDVVLVGGST-RI-PKVQQLLQDFFN-------GKELCKNINPDEAVAYGAAVQAAI 370 (523)
Q Consensus 322 i~~ViLvGG~s-~~-p~v~~~l~~~f~-------~~~v~~~~~p~~aVa~Gaa~~a~~ 370 (523)
++.|+|.||.+ .. +.+.+.+++.+. ...+..+.-.+.+.++|||.++..
T Consensus 238 p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 295 (302)
T 3vov_A 238 PGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAYL 295 (302)
T ss_dssp CSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHHH
T ss_pred CCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHHH
Confidence 56899999887 54 556555555441 112444445577999999988753
No 53
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=96.39 E-value=0.22 Score=48.25 Aligned_cols=48 Identities=23% Similarity=0.242 Sum_probs=33.0
Q ss_pred cceEEEecCccC-cHHHHHHHHHhhC---------CcccccCCCCchhhHhHHHHHHH
Q 009882 322 VHDVVLVGGSTR-IPKVQQLLQDFFN---------GKELCKNINPDEAVAYGAAVQAA 369 (523)
Q Consensus 322 i~~ViLvGG~s~-~p~v~~~l~~~f~---------~~~v~~~~~p~~aVa~Gaa~~a~ 369 (523)
++.|+|.||.+. .+.+.+.+++.+. ..++......+.+.++|||.++.
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 320 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL 320 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHH
Confidence 467999999886 5777777766552 12344444566789999998764
No 54
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.37 E-value=0.0082 Score=62.69 Aligned_cols=78 Identities=22% Similarity=0.236 Sum_probs=56.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCccc-ccCCCCchhhHhHHHHH
Q 009882 289 TRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKEL-CKNINPDEAVAYGAAVQ 367 (523)
Q Consensus 289 tr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v-~~~~~p~~aVa~Gaa~~ 367 (523)
++.++ ++-+++.+.-.+...++.... .. ++.|.++||+++++.+.+.+.+.+ +.++ ..+ .+.++.|+|||+.
T Consensus 375 ~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~-~~~e~~alGaA~l 447 (511)
T 3hz6_A 375 TRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVKP-DAHLHPLRGLAAL 447 (511)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEECC-CGGGHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEec-CCCCchHHHHHHH
Confidence 45444 444455554444444444332 34 789999999999999999999999 6777 554 5789999999999
Q ss_pred HHHHhC
Q 009882 368 AAILSG 373 (523)
Q Consensus 368 a~~~~~ 373 (523)
|+.-.|
T Consensus 448 A~~a~G 453 (511)
T 3hz6_A 448 AAVELE 453 (511)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 987654
No 55
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=96.25 E-value=0.065 Score=51.97 Aligned_cols=79 Identities=16% Similarity=0.226 Sum_probs=49.5
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHH
Q 009882 144 RQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 223 (523)
Q Consensus 144 r~~l~~A~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~ 223 (523)
...+.++-+..|++...+-.|-+|...+.+....... .+...+|+|+|||+|.+++++-. .+ ....+.++|...
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~-~~~~~lviDIGGGStEl~~~~~~--~~---~~~~Sl~lG~vr 165 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPM-EDHISLAMDIGGGSVEFIIGNKN--EI---LWKQSFEIGGQR 165 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCC-TTCCEEEEEECSSCEEEEEECSS--CE---EEEEEESCCHHH
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCC-CCCCEEEEEeCCCceEEEEEECC--eE---eeeEEEechhhH
Confidence 3455566667899875555566665444433322111 23568999999999999999732 22 223346788887
Q ss_pred HHHHH
Q 009882 224 FDNRM 228 (523)
Q Consensus 224 id~~l 228 (523)
+.+.+
T Consensus 166 l~e~f 170 (315)
T 3mdq_A 166 LIDRF 170 (315)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 77654
No 56
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.23 E-value=0.012 Score=61.74 Aligned_cols=51 Identities=25% Similarity=0.367 Sum_probs=44.3
Q ss_pred CcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 321 TVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
.++.|.++||+++++++.+.+.+.+ +.++..+ ...++.|+|||+.|+.-.|
T Consensus 402 ~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~lA~~a~G 452 (526)
T 3ezw_A 402 RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVG 452 (526)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHHHHHHHhC
Confidence 4789999999999999999999999 7787765 4567899999999987664
No 57
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.20 E-value=0.0086 Score=62.38 Aligned_cols=51 Identities=24% Similarity=0.339 Sum_probs=43.9
Q ss_pred CcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 321 TVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
.++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.|
T Consensus 404 ~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G 454 (501)
T 3g25_A 404 DVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFLAGLAVG 454 (501)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHTT
T ss_pred CCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHHHHHHhC
Confidence 4788999999999999999999999 6777654 4678999999999987654
No 58
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=96.19 E-value=0.014 Score=57.47 Aligned_cols=82 Identities=17% Similarity=0.151 Sum_probs=47.6
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHhcccccccCC-CCCeEEEEEEeCCcceEEEEEEE--eC--CeEEEEEecCCCC
Q 009882 144 RQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATS-VGEKNVLIFDLGGGTFDVSLLTI--EE--GIFEVKATAGDTH 218 (523)
Q Consensus 144 r~~l~~A~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~-~~~~~vlV~D~GggT~Dvsv~~~--~~--~~~~v~~~~~~~~ 218 (523)
.+.+.++-+..|++...+=.|-+|...+.+....... ......+|+|+|||+|+++++.- .. +.+ .......
T Consensus 105 ~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~---~~~~Slp 181 (343)
T 3cer_A 105 EEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV---QGAFSMN 181 (343)
T ss_dssp HHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC---SEEEEES
T ss_pred HHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCccccc---ceeEEEe
Confidence 3455556666799864444444444333333222111 12346899999999999999864 21 111 1123457
Q ss_pred CchHHHHHHH
Q 009882 219 LGGEDFDNRM 228 (523)
Q Consensus 219 lGG~~id~~l 228 (523)
+|+..+.+.+
T Consensus 182 lG~v~lt~~~ 191 (343)
T 3cer_A 182 IGSVRMTERH 191 (343)
T ss_dssp CCHHHHHHHT
T ss_pred hhHHHHHHHh
Confidence 9999888775
No 59
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=96.18 E-value=0.014 Score=60.84 Aligned_cols=51 Identities=25% Similarity=0.196 Sum_probs=43.5
Q ss_pred CcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 321 TVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
.++.|.++||+++++.+.+.+.+.+ +.++..+.. .++.|+|||+.|+.-.|
T Consensus 400 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~-~e~~alGaA~lA~~a~G 450 (508)
T 3ifr_A 400 APQRFFASDGGTRSRVWMGIMADVL-QRPVQLLAN-PLGSAVGAAWVAAIGGG 450 (508)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEEC-CSTHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCC-CCchHHHHHHHHHHHhC
Confidence 4788999999999999999999999 677776644 56889999999987664
No 60
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=96.18 E-value=0.21 Score=48.54 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=39.7
Q ss_pred CCcEEEEeCCCCCHHH----------------HHHHHHHHHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEe
Q 009882 128 IKNAVVTVPAYFNDSQ----------------RQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDL 191 (523)
Q Consensus 128 ~~~~VitVPa~~~~~q----------------r~~l~~A~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~ 191 (523)
+..+.|++|...+... ++.+.+ ..|++ +.+.++..|||++-..... ....++++++-+
T Consensus 81 i~~igi~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~---~~~~p-v~v~NDa~aaalgE~~~g~--~~~~~~~v~l~~ 154 (327)
T 2ap1_A 81 KGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSA---RLDRD-VRLDNDANCFALSEAWDDE--FTQYPLVMGLIL 154 (327)
T ss_dssp CCEEEEEESSBSCCTTSCCBCTTCTTTTTSCHHHHHHH---HHTSC-EEEEEHHHHHHHHHHTSTT--GGGCSEEEEEEE
T ss_pred ccEEEEEeeeeEECCCCEEEccCCCccCCCChHHHHHH---HHCCC-EEEecHHHHHHHHHHHhCc--CCCCCcEEEEEE
Confidence 5567888886543211 223333 34665 6899999999986432211 112457888888
Q ss_pred CCcceEEEEE
Q 009882 192 GGGTFDVSLL 201 (523)
Q Consensus 192 GggT~Dvsv~ 201 (523)
|.| .-.+++
T Consensus 155 GtG-iG~giv 163 (327)
T 2ap1_A 155 GTG-VGGGLV 163 (327)
T ss_dssp SSS-EEEEEE
T ss_pred CCc-EEEEEE
Confidence 887 445544
No 61
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.17 E-value=0.0087 Score=63.41 Aligned_cols=80 Identities=18% Similarity=0.214 Sum_probs=55.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCcc-CcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHH
Q 009882 289 TRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGST-RIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQ 367 (523)
Q Consensus 289 tr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~ 367 (523)
++.++ +.-+++.+.-.+...++........++.|.++||++ +++.+.+.+.+.| +.+|..+ .+.++.|+|||+.
T Consensus 410 t~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEEI---YRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHHH
Confidence 45554 334444443333333332211223578999999999 9999999999999 6777654 4678999999999
Q ss_pred HHHHhC
Q 009882 368 AAILSG 373 (523)
Q Consensus 368 a~~~~~ 373 (523)
|+.-.|
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 987664
No 62
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=96.11 E-value=0.015 Score=60.49 Aligned_cols=75 Identities=16% Similarity=0.167 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHHHcC-CCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 297 NMDLFRKCMEPVEKCLRDAK-MDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 297 ~~~~~~~~~~~i~~~l~~~~-~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
+.-+++.+.-.+...++... .....++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.|
T Consensus 373 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 373 ARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALMAGVGAG 448 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHHHHhhcC
Confidence 33444444444444443321 11234678999999999999999999999 6777665 4566999999999986654
No 63
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=96.08 E-value=0.0074 Score=63.16 Aligned_cols=51 Identities=22% Similarity=0.130 Sum_probs=42.8
Q ss_pred CcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 321 TVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
.++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.|
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G 475 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGSRAG 475 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHHHcC
Confidence 4788999999999999999999999 6777664 4577999999999987664
No 64
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.04 E-value=0.0093 Score=62.25 Aligned_cols=51 Identities=25% Similarity=0.367 Sum_probs=43.9
Q ss_pred CcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 321 TVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
.++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.|
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 451 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVG 451 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHHT
T ss_pred CccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHHHHHHhC
Confidence 4788999999999999999999999 6777654 4677999999999987664
No 65
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.03 E-value=0.01 Score=61.81 Aligned_cols=51 Identities=22% Similarity=0.283 Sum_probs=44.0
Q ss_pred CcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 321 TVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
.++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.|
T Consensus 403 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 453 (506)
T 3h3n_X 403 DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAAYLAGLAVG 453 (506)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHHHHHHHHhC
Confidence 4788999999999999999999999 6777654 5678999999999987654
No 66
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=95.81 E-value=0.37 Score=48.34 Aligned_cols=49 Identities=8% Similarity=0.083 Sum_probs=31.9
Q ss_pred cceEEEecCccC-cHHHHHHHHHhhC---------CcccccCCCCchhhHhHHHHHHHH
Q 009882 322 VHDVVLVGGSTR-IPKVQQLLQDFFN---------GKELCKNINPDEAVAYGAAVQAAI 370 (523)
Q Consensus 322 i~~ViLvGG~s~-~p~v~~~l~~~f~---------~~~v~~~~~p~~aVa~Gaa~~a~~ 370 (523)
++.|+|.||.+. .+.+.+.+++.+. ..++......+.+.++|||+....
T Consensus 335 P~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~~~ 393 (406)
T 1z6r_A 335 PQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKDA 393 (406)
T ss_dssp CSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHHHH
T ss_pred CCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHHHH
Confidence 567999999876 3666666655431 233444445677899999876543
No 67
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.77 E-value=0.029 Score=58.38 Aligned_cols=51 Identities=25% Similarity=0.357 Sum_probs=43.6
Q ss_pred CcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 321 TVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
.++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.|
T Consensus 403 ~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~G 453 (504)
T 2d4w_A 403 DLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYAAGIAVG 453 (504)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHHHHhhcC
Confidence 3678999999999999999999999 6777655 4567999999999987654
No 68
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.72 E-value=0.015 Score=60.69 Aligned_cols=50 Identities=24% Similarity=0.258 Sum_probs=42.6
Q ss_pred c-ceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHHhC
Q 009882 322 V-HDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 322 i-~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~~~ 373 (523)
+ +.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.|
T Consensus 407 ~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~~~G 457 (503)
T 2w40_A 407 MLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAVLAGLEVK 457 (503)
T ss_dssp CCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred ccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHHHHHHHhC
Confidence 5 78999999999999999999999 6777655 4566999999999987554
No 69
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=95.47 E-value=1.3 Score=43.86 Aligned_cols=89 Identities=16% Similarity=0.238 Sum_probs=51.1
Q ss_pred eHHHHHHHHHHHHHHHHHHH--hCCCCCcEEEEeCCCCCHH----------------HHHHHHHHHHHcCCceeeeechh
Q 009882 104 AAEEISSMVLIKMREIAEAY--LGSTIKNAVVTVPAYFNDS----------------QRQATKDAGVIAGLNVMRIINEP 165 (523)
Q Consensus 104 ~~~~v~~~~l~~l~~~a~~~--~~~~~~~~VitVPa~~~~~----------------qr~~l~~A~~~aGl~~~~li~Ep 165 (523)
+++++...+.+.+.+..... ...++..+.|++|...+.. -++.+.+ ..|++ +.+.++.
T Consensus 123 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~---~~~~p-V~v~NDa 198 (380)
T 2hoe_A 123 DREETLNVMYRIIDRAKDMMEKLGSKLSALTVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKE---KYGIE-VWVENDA 198 (380)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEESSCEETTTTEECCCSSCTTBTSCHHHHHHH---HHCSE-EEEEEHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEEeeccEECCCCEEeccCCCCCcCCChHHHHHH---HhCCC-EEEechH
Confidence 35555555555555443332 1345667788888754321 1233333 34765 6899999
Q ss_pred HHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEE
Q 009882 166 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 201 (523)
Q Consensus 166 ~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 201 (523)
.|||++....... . ++++++-+|.| +-.+++
T Consensus 199 naaalaE~~~g~~---~-~~~v~l~~GtG-iG~giv 229 (380)
T 2hoe_A 199 DMGAVGEKWYTKR---D-DSFAWILTGKG-IGAGII 229 (380)
T ss_dssp HHHHHHHHHHTTC---C-SCEEEEEESSS-CEEEEE
T ss_pred HHHHHHHHHhCCC---C-CcEEEEEeCCc-eEEEEE
Confidence 9999875332221 2 56788888887 445555
No 70
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=95.47 E-value=0.88 Score=45.97 Aligned_cols=91 Identities=16% Similarity=0.301 Sum_probs=49.3
Q ss_pred eHHHHHHHHHHHHHHHHHHHh--CCCCCcEEEEeCCC---------------CCH-HHHHHHHHHHHHcCCceeeeechh
Q 009882 104 AAEEISSMVLIKMREIAEAYL--GSTIKNAVVTVPAY---------------FND-SQRQATKDAGVIAGLNVMRIINEP 165 (523)
Q Consensus 104 ~~~~v~~~~l~~l~~~a~~~~--~~~~~~~VitVPa~---------------~~~-~qr~~l~~A~~~aGl~~~~li~Ep 165 (523)
.++++...+.+.+.+...+.- ..++..+.|++|.. |.. .-++.+.+ ..|++ +.+.++.
T Consensus 143 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~---~~~~p-V~v~NDa 218 (429)
T 1z05_A 143 DQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYK---ATGLP-VFVANDT 218 (429)
T ss_dssp BHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEETTTTEEEECSSSBCSSBCHHHHHHH---HHCSC-EEEEEHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEeccCcEeCCCCeEeecCCCCCCCCCHHHHHHH---HhCCC-EEEechh
Confidence 355566655555555443321 12334456666653 221 11233433 34765 6899999
Q ss_pred HHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEE
Q 009882 166 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 201 (523)
Q Consensus 166 ~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 201 (523)
.|||++-..... ....++++++-+|.| +-.+++
T Consensus 219 ~aaalaE~~~g~--~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 219 RAWALAEKLFGH--SQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HHHHHHHHHHST--TTTCSSEEEEEESSS-EEEEEE
T ss_pred HHHHHHHHHhCC--CCCCCcEEEEEECCc-EEEEEE
Confidence 999987432211 113456888888887 445555
No 71
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=95.41 E-value=0.26 Score=51.95 Aligned_cols=82 Identities=15% Similarity=0.168 Sum_probs=56.6
Q ss_pred EEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHH-HhhCCcccccCCCCchhhHhH
Q 009882 285 YSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQ-DFFNGKELCKNINPDEAVAYG 363 (523)
Q Consensus 285 ~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~-~~f~~~~v~~~~~p~~aVa~G 363 (523)
.+.||..+++++. -.-..+..-++-+|++++++..+|+.|+|.||++.---+.+.+. -.+|.....+...-..+.-.|
T Consensus 499 ~i~itq~DIr~~q-lAKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~iGllP~~~~~ki~~vGN~sl~G 577 (631)
T 3zyy_X 499 DIVITEADIQNLI-RAKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAITIGLLPDIDINKFSYVGNSSLKG 577 (631)
T ss_dssp CEEEEHHHHHHHH-HHHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHHHTSSCCSCGGGEEECSCHHHHH
T ss_pred cEEEeHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhhcCCCCCccccCEEEECcHHHHH
Confidence 3689999998753 34455667788889999999999999999999998766666665 344543222222223455666
Q ss_pred HHHH
Q 009882 364 AAVQ 367 (523)
Q Consensus 364 aa~~ 367 (523)
|.+.
T Consensus 578 A~~~ 581 (631)
T 3zyy_X 578 ARKA 581 (631)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 72
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.35 E-value=0.024 Score=58.74 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=39.6
Q ss_pred CcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHH
Q 009882 321 TVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAI 370 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~ 370 (523)
.++.|.++||+++++.+.+.+.+.+ +.++.... .++.|.|||+.|..
T Consensus 393 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa~~A~~ 439 (489)
T 2uyt_A 393 DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNIGIQLM 439 (489)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHHHHHHH
T ss_pred CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHHHHHHH
Confidence 3678999999999999999999999 67776543 68999999776654
No 73
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=95.31 E-value=2.1 Score=40.87 Aligned_cols=63 Identities=19% Similarity=0.139 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccC--cHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHH
Q 009882 297 NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTR--IPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAA 369 (523)
Q Consensus 297 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~--~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~ 369 (523)
...++++..+.+-..+...-. . +.+.|+|.||.+. .|.+.+.+++.+ . .|+.+.+.||+++|.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-----c---CCCCCHHHHHHHHHh
Confidence 344555555555555554432 2 5678999999864 466767776653 1 256788999998864
No 74
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=95.27 E-value=0.034 Score=57.85 Aligned_cols=77 Identities=17% Similarity=0.201 Sum_probs=46.2
Q ss_pred HHHHHHHHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHH
Q 009882 145 QATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF 224 (523)
Q Consensus 145 ~~l~~A~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~i 224 (523)
..+.++-+..|+++..+=.|-+|...+.+...... ..+..+|+|+|||+|.+++.+ ++.+. ...+.++|...+
T Consensus 100 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~--~~~~~lviDIGGGStEl~~~~--~~~~~---~~~Sl~lG~vrl 172 (513)
T 1u6z_A 100 DFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQP--EKGRKLVIDIGGGSTELVIGE--NFEPI---LVESRRMGCVSF 172 (513)
T ss_dssp HHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSC--CCSCEEEEEECSSCEEEEEEE--TTEEE---EEEEESCCHHHH
T ss_pred HHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhcc--CCCCEEEEEECCCcEEEEEEe--CCeee---EEEEEeccHHHH
Confidence 44445555679886444444445443333332211 112689999999999999875 44332 223367999888
Q ss_pred HHHH
Q 009882 225 DNRM 228 (523)
Q Consensus 225 d~~l 228 (523)
.+.+
T Consensus 173 te~f 176 (513)
T 1u6z_A 173 AQLY 176 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 75
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=94.72 E-value=3.3 Score=40.09 Aligned_cols=51 Identities=18% Similarity=0.207 Sum_probs=38.0
Q ss_pred cceEEEecCccCcHHHHHHHHHhhC--CcccccCC---CCchhhHhHHHHHHHHHh
Q 009882 322 VHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKNI---NPDEAVAYGAAVQAAILS 372 (523)
Q Consensus 322 i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~~~---~p~~aVa~Gaa~~a~~~~ 372 (523)
++.|+|+||.+....+++.|.+.+. +.++..+. -.|.++++|+|.+.....
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 300 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKA 300 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHT
T ss_pred CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhc
Confidence 5689999999999999999998762 34454443 346688999887655433
No 76
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=93.69 E-value=0.092 Score=54.15 Aligned_cols=71 Identities=8% Similarity=0.000 Sum_probs=51.6
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHh-hCCcccccCCCCchhhHhHHHHHHHH
Q 009882 294 EELNMDLFRK--CMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDF-FNGKELCKNINPDEAVAYGAAVQAAI 370 (523)
Q Consensus 294 e~~~~~~~~~--~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~-f~~~~v~~~~~p~~aVa~Gaa~~a~~ 370 (523)
..+..-+++. +.-.+...++.... .+.|.++||+++++.+.+.+.+. | +.++..+. ..++.|+|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~-~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTAN-AHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEES-SCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcC-CCchHHHHHHHHhCc
Confidence 3444455553 44445555554431 26899999999999999999999 9 77777664 456889999999874
No 77
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=91.60 E-value=0.49 Score=44.00 Aligned_cols=17 Identities=24% Similarity=0.258 Sum_probs=15.2
Q ss_pred CEEEEEccccceEEEEE
Q 009882 8 PAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 8 ~vvGID~GTt~s~va~~ 24 (523)
+.++||.|+|+++.+++
T Consensus 4 M~L~IDIGNT~ik~gl~ 20 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSIT 20 (249)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred eEEEEEECCCeEEEEEE
Confidence 47999999999998876
No 78
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=91.27 E-value=0.62 Score=45.63 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccC----CCCchhhHhHHHHHHHHH
Q 009882 296 LNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKN----INPDEAVAYGAAVQAAIL 371 (523)
Q Consensus 296 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~----~~p~~aVa~Gaa~~a~~~ 371 (523)
+..-+.+-+...|.+.++.... .++.|+++||+++.|.+.++|++.+++.++... .+|+.-=|..-|++|...
T Consensus 261 v~ATLt~~TA~sIa~~~~~~~~---~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~~ 337 (371)
T 3qbx_A 261 IQATLLELSARSISESLLDAQP---DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHRF 337 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT---TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccC---CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHHH
Confidence 3444444455556666655432 367899999999999999999999976554332 246655566677777654
Q ss_pred h
Q 009882 372 S 372 (523)
Q Consensus 372 ~ 372 (523)
.
T Consensus 338 l 338 (371)
T 3qbx_A 338 L 338 (371)
T ss_dssp H
T ss_pred H
Confidence 3
No 79
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=91.19 E-value=5 Score=41.75 Aligned_cols=204 Identities=15% Similarity=0.158 Sum_probs=100.5
Q ss_pred CCCcEEEEe-CCCCCHHHHHHH--HHHHHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEE
Q 009882 127 TIKNAVVTV-PAYFNDSQRQAT--KDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTI 203 (523)
Q Consensus 127 ~~~~~VitV-Pa~~~~~qr~~l--~~A~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~ 203 (523)
.++.+++|. |..|+....-.. +..+...|++.+. ++.-.|-+++...... ...+ +++-+-||++.+..+
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~--~~~p---~~l~vsGg~t~~~~~-- 143 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTE--AEDP---LTLYVSGGNTQVIAY-- 143 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSS--CSSC---EEEEECSSCEEEEEE--
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcC--CCCC---cEEEEcCCCcEEEEE--
Confidence 566676766 666554432111 2234445665443 5555554443323222 1122 666666778766544
Q ss_pred eCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhcCCCceeEEEEecccCCee
Q 009882 204 EEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID 283 (523)
Q Consensus 204 ~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~ 283 (523)
.++.+++++..-+ .--|+.||. ++..+ +......+ .+...|.+.+..+ .++....+.+
T Consensus 144 ~~~~~~~lg~t~d-~s~G~~~D~-~a~~l--------gl~~~gg~----~ie~lA~~g~~~~--------~~p~~~~~~~ 201 (540)
T 3en9_A 144 VSKKYRVFGETLD-IAVGNCLDQ-FARYV--------NLPHPGGP----YIEELARKGKKLV--------DLPYTVKGMD 201 (540)
T ss_dssp ETTEEEEEEEBSS-SCHHHHHHH-HHHHT--------TCCSSCHH----HHHHHHHTCCCCC--------CCCCCEETTE
T ss_pred eCCceEEEeeccc-hHhHHHHHH-HHHHc--------CCCCCCHH----HHHHHHHcCCccC--------cCCCCCCCcc
Confidence 4688999988665 455777774 23332 22222222 2222233222111 1111111222
Q ss_pred eEEE-------------EcHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhC--C
Q 009882 284 FYST-------------ITRARFEELNM-DLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN--G 347 (523)
Q Consensus 284 ~~~~-------------itr~~~e~~~~-~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--~ 347 (523)
+++. .+..++...++ .+++-+.+.+.++++..+ ++.|+|+||.+....+++.+.+... +
T Consensus 202 ~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~~~~ 276 (540)
T 3en9_A 202 IAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCEGQN 276 (540)
T ss_dssp ECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHHHTT
T ss_pred eecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHHhcC
Confidence 2110 01122221111 223334455556666554 5689999999999999999998763 3
Q ss_pred cccccCC---CCchhhHhHHH
Q 009882 348 KELCKNI---NPDEAVAYGAA 365 (523)
Q Consensus 348 ~~v~~~~---~p~~aVa~Gaa 365 (523)
.++..+. -.|.++..|.+
T Consensus 277 ~~~~~p~~~~~~Dngamia~~ 297 (540)
T 3en9_A 277 VDFYVPPKEFCGDNGAMIAWL 297 (540)
T ss_dssp CEEECCCHHHHSSCHHHHHHH
T ss_pred CEEEeCCCcCCCCCHHHHHHH
Confidence 3444432 13445555554
No 80
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=90.80 E-value=1.5 Score=41.14 Aligned_cols=17 Identities=29% Similarity=0.444 Sum_probs=15.5
Q ss_pred CEEEEEccccceEEEEE
Q 009882 8 PAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 8 ~vvGID~GTt~s~va~~ 24 (523)
+.++||+|+|+++.+++
T Consensus 3 MlL~IDIGNT~iK~gl~ 19 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVF 19 (266)
T ss_dssp CEEEEEECSSEEEEEEE
T ss_pred eEEEEEECCCeEEEEEE
Confidence 58999999999998886
No 81
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=89.64 E-value=0.29 Score=50.73 Aligned_cols=76 Identities=21% Similarity=0.280 Sum_probs=46.4
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHH
Q 009882 144 RQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 223 (523)
Q Consensus 144 r~~l~~A~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~ 223 (523)
...+.++-+..|+++-.+=.|-+|...+.+..... .....+|+|+|||+|.+++++ ++.+ ....+.++|...
T Consensus 103 ~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~---~~~~~lvvDIGGGStEl~~~~--~~~~---~~~~Sl~lG~vr 174 (508)
T 3hi0_A 103 PDFIREAEAILGCEIEVLSGEKEALYSAYGVISGF---YQPDGIAGDLGGGSLELIDIK--DKSC---GEGITLPLGGLR 174 (508)
T ss_dssp HHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHS---SSCEEEEEEECSSCEEEEEEE--TTEE---CCCEEESCCHHH
T ss_pred HHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcC---CCCCeEEEEeCCCceEEEEee--CCee---eeEEEecceEEe
Confidence 44556666678998654444555554444433221 112349999999999999987 3322 223346788887
Q ss_pred HHHH
Q 009882 224 FDNR 227 (523)
Q Consensus 224 id~~ 227 (523)
+.+.
T Consensus 175 l~e~ 178 (508)
T 3hi0_A 175 LSEQ 178 (508)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 7753
No 82
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=89.31 E-value=1.1 Score=43.97 Aligned_cols=74 Identities=14% Similarity=0.181 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCccccc----CCCCchhhHhHHHHHHHH
Q 009882 295 ELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCK----NINPDEAVAYGAAVQAAI 370 (523)
Q Consensus 295 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~----~~~p~~aVa~Gaa~~a~~ 370 (523)
++..-+.+=+...|.+.++... ..+.|+++||+++.|.+.++|++.+++.++.. ..+|+.-=|..-|++|..
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~ 342 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMR 342 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHH
Confidence 4444555555666666666542 35689999999999999999999997654432 235565445555677665
Q ss_pred Hh
Q 009882 371 LS 372 (523)
Q Consensus 371 ~~ 372 (523)
..
T Consensus 343 ~l 344 (370)
T 3cqy_A 343 YQ 344 (370)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 83
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=88.50 E-value=1.4 Score=42.75 Aligned_cols=68 Identities=16% Similarity=0.247 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhC--CcccccCC---CCchhhHhHHHHHHHHHhC
Q 009882 301 FRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKNI---NPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 301 ~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~~~---~p~~aVa~Gaa~~a~~~~~ 373 (523)
.+.+.+.+.+++++.+ ++.|+|+||.+...++++.+.+.+. +.++..+. -.|.++++|+|.+.....+
T Consensus 234 ~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 234 FAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 3444455555555554 5789999999999999999998763 33444433 3477899999977655443
No 84
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=87.06 E-value=1.8 Score=45.94 Aligned_cols=50 Identities=20% Similarity=0.244 Sum_probs=39.6
Q ss_pred CcceEEEecCccCcHHHHHHHHHhhCCcccccC---CCCchhhHhHHHHHHHH
Q 009882 321 TVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKN---INPDEAVAYGAAVQAAI 370 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~---~~p~~aVa~Gaa~~a~~ 370 (523)
.++.|+|+||.+...++++.+.+.+.+.++..+ .-.|.++|+|.|++|+.
T Consensus 599 g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 599 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 367999999999999999999998754444332 23478999999998864
No 85
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=85.44 E-value=1.6 Score=47.16 Aligned_cols=51 Identities=29% Similarity=0.354 Sum_probs=39.6
Q ss_pred cceEEEecCccCcHHHHHHHHHhhC--CcccccC-CC--CchhhHhHHHHHHHHHh
Q 009882 322 VHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKN-IN--PDEAVAYGAAVQAAILS 372 (523)
Q Consensus 322 i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~~-~~--p~~aVa~Gaa~~a~~~~ 372 (523)
++.|+|+||.+....+++.+.+.+. +.++..+ .- .|.++|+|.|++|+...
T Consensus 694 ~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 694 INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 5789999999999999999998762 4444332 12 37899999999987654
No 86
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=84.43 E-value=5.3 Score=40.76 Aligned_cols=94 Identities=12% Similarity=0.159 Sum_probs=59.5
Q ss_pred eHHHHHHHHHHHHHHHHHHHhCCC-----CCcEEEEeCC-----------CCC----------HHHHHHHHHHHHHcCCc
Q 009882 104 AAEEISSMVLIKMREIAEAYLGST-----IKNAVVTVPA-----------YFN----------DSQRQATKDAGVIAGLN 157 (523)
Q Consensus 104 ~~~~v~~~~l~~l~~~a~~~~~~~-----~~~~VitVPa-----------~~~----------~~qr~~l~~A~~~aGl~ 157 (523)
+.+++...+-..+.+..+++.... ...+.++.|. .|+ ..-.+.+.+|.+.-|++
T Consensus 122 ~~~~lfd~Ia~~i~~fl~~~~~~~~~~~l~lGftfSfP~~q~~i~~g~li~wtKGF~i~~~~G~dv~~~L~~al~r~gl~ 201 (485)
T 3o8m_A 122 TSEQLWSFIAKCLKEFVDEWYPDGVSEPLPLGFTFSYPASQKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQIEKLNIP 201 (485)
T ss_dssp BHHHHHHHHHHHHHHHHHHHCTTCCSSCEEEEEEECSCEECSBTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeeeEEEcccCCEEEeeccccccCCCcCCccHHHHHHHHHHhcCCC
Confidence 456666666666666555543211 2234455564 353 44577888999888886
Q ss_pred e--eeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEEE
Q 009882 158 V--MRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTI 203 (523)
Q Consensus 158 ~--~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~ 203 (523)
+ +.++|...|++++..... ....+-+=+|.||=-..+...
T Consensus 202 v~v~aivNDtv~tll~~~y~~------~~~~iglIlGTG~N~~y~e~~ 243 (485)
T 3o8m_A 202 INVVALINDTTGTLVASLYTD------PQTKMGIIIGTGVNGAYYDVV 243 (485)
T ss_dssp EEEEEEECHHHHHHHHHHHHC------TTEEEEEEESSSEEEEEEEEG
T ss_pred ceEEEEEEcHHHHHHHHhhCC------CCcEEEEEEecCcceEEEeec
Confidence 3 689999999998765432 246666777887665555543
No 87
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=84.27 E-value=1.9 Score=46.92 Aligned_cols=51 Identities=20% Similarity=0.346 Sum_probs=39.6
Q ss_pred CcceEEEecCccCcHHHHHHHHHhhC--CcccccCC---CCchhhHhHHHHHHHHH
Q 009882 321 TVHDVVLVGGSTRIPKVQQLLQDFFN--GKELCKNI---NPDEAVAYGAAVQAAIL 371 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~~~---~p~~aVa~Gaa~~a~~~ 371 (523)
.++.|+|+||.+....+++.+.+.+. +.++..+. -.|..+|.|.|++|+..
T Consensus 705 g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 705 GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 36789999999999999999999874 33444432 23788999999988654
No 88
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=80.34 E-value=13 Score=37.26 Aligned_cols=55 Identities=18% Similarity=0.239 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHcC---CceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEE
Q 009882 142 SQRQATKDAGVIAG---LNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (523)
Q Consensus 142 ~qr~~l~~A~~~aG---l~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (523)
.-.+.+++|.+.-| ++++.++|+.+|+.++..... ..+.+-+=+|.||=-+.+.+
T Consensus 161 dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~------~~~~iglIlGTGtNa~y~e~ 218 (445)
T 3hm8_A 161 DVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED------PRCEIGLIVGTGTNACYMEE 218 (445)
T ss_dssp BHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC------TTEEEEEEESSSEEEEEEEE
T ss_pred cHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC------CCceEEEEEeCCceEEEEEe
Confidence 34677888887754 467899999999988754432 23566666787765544433
No 89
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=80.03 E-value=5.1 Score=41.72 Aligned_cols=64 Identities=17% Similarity=0.188 Sum_probs=45.8
Q ss_pred HHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccC-CCCchhhHhHHHHHHHHHhC
Q 009882 305 MEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKN-INPDEAVAYGAAVQAAILSG 373 (523)
Q Consensus 305 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~-~~p~~aVa~Gaa~~a~~~~~ 373 (523)
.+.+..+.++.+ ++.|.|+||.+....+++.+.+..+-..+..+ .-.|.++++|+|+++....+
T Consensus 296 ~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g 360 (576)
T 3ven_A 296 FGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELG 360 (576)
T ss_dssp HHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcC
Confidence 344445555544 67999999999999999999876532233332 34578999999999887654
No 90
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=78.69 E-value=6.8 Score=39.72 Aligned_cols=93 Identities=8% Similarity=-0.059 Sum_probs=58.9
Q ss_pred eHHHHHHHHHHHHHHHHHHHhC---CC-CCcEEEEeCCC-----------CC-H-------HHHHHHHHHHHHcCCc--e
Q 009882 104 AAEEISSMVLIKMREIAEAYLG---ST-IKNAVVTVPAY-----------FN-D-------SQRQATKDAGVIAGLN--V 158 (523)
Q Consensus 104 ~~~~v~~~~l~~l~~~a~~~~~---~~-~~~~VitVPa~-----------~~-~-------~qr~~l~~A~~~aGl~--~ 158 (523)
+.+++...+...+.+..++... .. +..+-++.|.. |+ . .-++.+.++.+..|++ +
T Consensus 103 ~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~lGi~fs~P~~q~~~~~g~l~~wtKgf~i~~~~~v~~~L~~~l~r~glpv~v 182 (457)
T 2yhx_A 103 IPSDLWGNXAXSNAAFSSXEFSSXAGSVPLGFTFXEAGAKEXVIKGQITXQAXAFSLAXLXKLISAMXNAXFPAGDXXXS 182 (457)
T ss_dssp CTHHHHHHHHHHHHHHHHHHTSSCSSCEEEEEECCSCCCCSBTTCCBCSSCCTTCCCSSCSSBHHHHHHHHHHHHCCEEE
T ss_pred CHHHHHHHHHHHHHHHHhhcccccccccceeeEEEEEEEEeecCceEEEeeccCCCcchhHHHHHHHHHhHhhcCCccee
Confidence 4567777777777665554321 11 23455666654 64 3 4467778887666765 4
Q ss_pred eeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEE
Q 009882 159 MRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (523)
Q Consensus 159 ~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (523)
+.++|...|++++-... ..++++.+=+|.|+=-.-+..
T Consensus 183 val~NDa~~tll~e~~~------~~~~~iglilGTGvgg~~i~~ 220 (457)
T 2yhx_A 183 VADIXDSHGILXXVNYT------DAXIKMGIIFGSGVNAAYWCD 220 (457)
T ss_dssp EEEECHHHHHHHHHHHH------CTTEEEEEEESSSEEEEEEEC
T ss_pred EEEEecchhhccchhhc------CCccEEEEEECcEEEEEEEEC
Confidence 88999999999976552 234677777888855544444
No 91
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=78.50 E-value=2.4 Score=41.49 Aligned_cols=46 Identities=24% Similarity=0.377 Sum_probs=27.8
Q ss_pred CCceeeeechhHHHHHhc-----ccccccCCCCCeEEEEEEeCCcceEEEEEE
Q 009882 155 GLNVMRIINEPTAAAIAY-----GLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (523)
Q Consensus 155 Gl~~~~li~Ep~Aaa~~~-----~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (523)
|+. +.+|+-.+=|.+.| .+..-. ....++++|+|+|||+|.++...
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~~~~-~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLDTLK-SVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTTCSS-SCCSSCEEEEEECSSEEEEEEEC
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhhhcc-ccccccEEEEEeCCCceEEEEec
Confidence 554 46666555444443 222100 01234699999999999999873
No 92
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=78.25 E-value=0.91 Score=47.02 Aligned_cols=24 Identities=29% Similarity=0.328 Sum_probs=17.0
Q ss_pred CCCCCCCCEEEEEccccceEEEEE
Q 009882 1 MAGKGEGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 1 M~~~~~~~vvGID~GTt~s~va~~ 24 (523)
|+..++..++|||+|||+++++++
T Consensus 1 ~~~~~~~~~lgIDiGtts~k~~l~ 24 (508)
T 3ifr_A 1 MSLAQGRQVIGLDIGTTSTIAILV 24 (508)
T ss_dssp ------CEEEEEEECSSEEEEEEE
T ss_pred CCcccCCEEEEEEecCcceEEEEE
Confidence 666667889999999999999887
No 93
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=76.64 E-value=1.4 Score=45.76 Aligned_cols=24 Identities=29% Similarity=0.290 Sum_probs=19.3
Q ss_pred CCCCCCCCEEEEEccccceEEEEE
Q 009882 1 MAGKGEGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 1 M~~~~~~~vvGID~GTt~s~va~~ 24 (523)
|++|.+..++|||+|||+++++++
T Consensus 20 ~~~MM~~~~lgIDiGtts~k~~l~ 43 (520)
T 4e1j_A 20 FQSMMGGYILAIDQGTTSTRAIVF 43 (520)
T ss_dssp CCCCCSCEEEEEEECSSEEEEEEE
T ss_pred HHHHhhCeEEEEEeCCcceEEEEE
Confidence 344445679999999999999887
No 94
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=75.86 E-value=8.7 Score=36.33 Aligned_cols=50 Identities=16% Similarity=0.160 Sum_probs=37.1
Q ss_pred cceEEEecCccCcHHHHHHHHHhhCC-----cccccCCCCchhhHhHHHHHHHHH
Q 009882 322 VHDVVLVGGSTRIPKVQQLLQDFFNG-----KELCKNINPDEAVAYGAAVQAAIL 371 (523)
Q Consensus 322 i~~ViLvGG~s~~p~v~~~l~~~f~~-----~~v~~~~~p~~aVa~Gaa~~a~~~ 371 (523)
++.|+|.||.+..+.+.+.|++.+.. .++....-.+.+.++|||.++...
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~ 292 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQE 292 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHH
Confidence 57899999999888777888877632 234444556789999999887653
No 95
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=73.77 E-value=1.3 Score=45.46 Aligned_cols=23 Identities=48% Similarity=0.729 Sum_probs=15.2
Q ss_pred CCCCCCCCEEEEEccccceEEEEE
Q 009882 1 MAGKGEGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 1 M~~~~~~~vvGID~GTt~s~va~~ 24 (523)
|+.| ++.++|||+|||+++++++
T Consensus 1 m~~m-m~~~lgIDiGTts~Ka~l~ 23 (482)
T 3h6e_A 1 MSLS-TGATIVIDLGKTLSKVSLW 23 (482)
T ss_dssp --------CEEEEECSSEEEEEEE
T ss_pred Cchh-hceEEEEEcCCCCeEEEEE
Confidence 5555 6789999999999999887
No 96
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=73.73 E-value=15 Score=34.91 Aligned_cols=44 Identities=18% Similarity=0.253 Sum_probs=28.2
Q ss_pred cCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEE
Q 009882 154 AGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 201 (523)
Q Consensus 154 aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 201 (523)
.|++ +.+.++..|||++-...-. ....++++++-+|.| .-.+++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~--~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGE--AXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHST--TTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCC--CCCCCcEEEEEECCc-eEEEEE
Confidence 4776 6899999999986433211 123456888888875 444544
No 97
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=72.89 E-value=7.3 Score=36.53 Aligned_cols=48 Identities=21% Similarity=0.210 Sum_probs=33.7
Q ss_pred cceEEEecCccCcHHHHHHHHHhhCCc------ccccCCCCchhhHhHHHHHHH
Q 009882 322 VHDVVLVGGSTRIPKVQQLLQDFFNGK------ELCKNINPDEAVAYGAAVQAA 369 (523)
Q Consensus 322 i~~ViLvGG~s~~p~v~~~l~~~f~~~------~v~~~~~p~~aVa~Gaa~~a~ 369 (523)
++.|+|.||.+..+.+.+.+++.+... ++......+.+.++|||.++.
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 457999999887777888887766332 233344556789999998753
No 98
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=71.59 E-value=28 Score=35.20 Aligned_cols=91 Identities=13% Similarity=0.147 Sum_probs=55.4
Q ss_pred eHHHHHHHHHHHHHHHHHHHhCC---CCCcEEEEeCC-----------CC----------CHHHHHHHHHHHHHcC---C
Q 009882 104 AAEEISSMVLIKMREIAEAYLGS---TIKNAVVTVPA-----------YF----------NDSQRQATKDAGVIAG---L 156 (523)
Q Consensus 104 ~~~~v~~~~l~~l~~~a~~~~~~---~~~~~VitVPa-----------~~----------~~~qr~~l~~A~~~aG---l 156 (523)
+.+++...+-..|.+..++.... -+..+.+|.|. .| ...-.+.+++|++.-| +
T Consensus 123 t~~eLFd~IA~~i~~fl~~~~~~~~~lpLGfTFSFP~~Q~sl~~g~Li~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v 202 (470)
T 3f9m_A 123 TAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEM 202 (470)
T ss_dssp BHHHHHHHHHHHHHHHHHHTTCSSSCCEEEEEECSCEEEEETTEEEECCCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCC
T ss_pred CHHHHHHHHHHHHHHHHhhccccccccceEEEEeccccccCCCceEEEeccccccCCCcCCccHHHHHHHHHHhcCCCCC
Confidence 45566666666565554443211 12345666664 23 3345778889998887 3
Q ss_pred ceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEE
Q 009882 157 NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSL 200 (523)
Q Consensus 157 ~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv 200 (523)
+++.++|+.+|..++..... ....+=+=+|.||=-+-+
T Consensus 203 ~v~AlvNDTVgTL~s~aY~~------~~~~iGlI~GTGtNa~Y~ 240 (470)
T 3f9m_A 203 DVVAMVNDTVATMISCYYED------HQCEVGMIVGTGCNACYM 240 (470)
T ss_dssp EEEEEECHHHHHHHHHHTTC------TTEEEEEEESSSEEEEEE
T ss_pred cEEEEEEcCHHHHHhcccCC------CCceEEEEEecCCceEEe
Confidence 67889999999988765432 235566667887664433
No 99
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=68.59 E-value=6.7 Score=39.71 Aligned_cols=20 Identities=25% Similarity=0.463 Sum_probs=17.1
Q ss_pred CeEEEEEEeCCcceEEEEEE
Q 009882 183 EKNVLIFDLGGGTFDVSLLT 202 (523)
Q Consensus 183 ~~~vlV~D~GggT~Dvsv~~ 202 (523)
...++|+|+|||++.++...
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 35689999999999999874
No 100
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=68.53 E-value=37 Score=32.52 Aligned_cols=44 Identities=20% Similarity=0.210 Sum_probs=28.4
Q ss_pred cCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEE
Q 009882 154 AGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 201 (523)
Q Consensus 154 aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 201 (523)
.|++ +.+.++..|||++...... ....++++++-+|.| +-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~--~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQ--GKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTST--TTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCC--CCCCCcEEEEEECCC-EEEEEE
Confidence 3665 6889999999987532211 113356788888887 445554
No 101
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=65.69 E-value=3.7 Score=34.15 Aligned_cols=17 Identities=29% Similarity=0.323 Sum_probs=15.7
Q ss_pred CEEEEEccccceEEEEE
Q 009882 8 PAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 8 ~vvGID~GTt~s~va~~ 24 (523)
.++|||+|+..+++|+.
T Consensus 4 ~iLglD~G~kriGvAvs 20 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVG 20 (138)
T ss_dssp EEEEEECCSSEEEEEEE
T ss_pred eEEEEEeCCCEEEEEEE
Confidence 48999999999999986
No 102
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=65.68 E-value=3.6 Score=31.93 Aligned_cols=16 Identities=19% Similarity=0.181 Sum_probs=15.0
Q ss_pred EEEEEccccceEEEEE
Q 009882 9 AIGIDLGTTYSCVGVW 24 (523)
Q Consensus 9 vvGID~GTt~s~va~~ 24 (523)
++|||+|+..+++|+.
T Consensus 3 iLglD~G~kriGvAvs 18 (98)
T 1iv0_A 3 VGALDVGEARIGLAVG 18 (98)
T ss_dssp EEEEEESSSEEEEEEE
T ss_pred EEEEEeCCCEEEEEEE
Confidence 8999999999999886
No 103
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=64.92 E-value=2.8 Score=43.27 Aligned_cols=19 Identities=32% Similarity=0.338 Sum_probs=17.1
Q ss_pred CCCEEEEEccccceEEEEE
Q 009882 6 EGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (523)
+..++|||+|||+++++++
T Consensus 3 m~~~lgIDiGtts~K~~l~ 21 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLY 21 (504)
T ss_dssp CEEEEEEEECSSEEEEEEE
T ss_pred CCEEEEEEecCCceEEEEE
Confidence 5679999999999999887
No 104
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=64.87 E-value=26 Score=33.23 Aligned_cols=50 Identities=22% Similarity=0.246 Sum_probs=34.9
Q ss_pred CcceEEEecCccCc-----HHHHHHHHHhhC------CcccccCCCCchhhHhHHHHHHHH
Q 009882 321 TVHDVVLVGGSTRI-----PKVQQLLQDFFN------GKELCKNINPDEAVAYGAAVQAAI 370 (523)
Q Consensus 321 ~i~~ViLvGG~s~~-----p~v~~~l~~~f~------~~~v~~~~~p~~aVa~Gaa~~a~~ 370 (523)
+++.|+|-||.+.. +.+++.+++++. ..++....-.+.+.++|||.++..
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 36789999998865 467777777652 123444445678999999988754
No 105
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=64.66 E-value=2.8 Score=42.99 Aligned_cols=19 Identities=21% Similarity=0.233 Sum_probs=17.1
Q ss_pred CCCEEEEEccccceEEEEE
Q 009882 6 EGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (523)
+..++|||+|||+++++++
T Consensus 3 ~~~~lgiDiGtts~k~~l~ 21 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLA 21 (489)
T ss_dssp CEEEEEEEECSSEEEEEEE
T ss_pred cceEEEEEecCCCceEEEE
Confidence 5679999999999999887
No 106
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=64.63 E-value=3 Score=43.59 Aligned_cols=19 Identities=37% Similarity=0.595 Sum_probs=17.1
Q ss_pred CCCEEEEEccccceEEEEE
Q 009882 6 EGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (523)
+..++|||+|||+++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~ 22 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVF 22 (554)
T ss_dssp CCEEEEEEECSSEEEEEEE
T ss_pred CcEEEEEEECcccEEEEEE
Confidence 4589999999999999887
No 107
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=64.40 E-value=3.3 Score=42.81 Aligned_cols=19 Identities=26% Similarity=0.177 Sum_probs=16.8
Q ss_pred CCCEEEEEccccceEEEEE
Q 009882 6 EGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (523)
+..++|||+|||+++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~ 22 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVT 22 (515)
T ss_dssp SCEEEEEEECSSEEEEEEE
T ss_pred CcEEEEEEeccccEEEEEE
Confidence 4579999999999998877
No 108
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=63.10 E-value=50 Score=30.78 Aligned_cols=66 Identities=6% Similarity=-0.096 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCC-CcceEEEecCccCc--HHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHH
Q 009882 297 NMDLFRKCMEPVEKCLRDAKMDKS-TVHDVVLVGGSTRI--PKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAI 370 (523)
Q Consensus 297 ~~~~~~~~~~~i~~~l~~~~~~~~-~i~~ViLvGG~s~~--p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~ 370 (523)
...++++..+.+-..+ .. ... +.+.|+|.||.+.. +.+++.+++... ++. .|..+...||+.++..
T Consensus 212 A~~i~~~~~~~La~~i-~~--~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~~--~i~---~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 212 VYSLVQNSFDDFLVRN-VL--RYNRPDLPLHFIGSVAFHYREVLSSVIKKRGL--TLG---SVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHH-TG--GGCCTTSCEEEESHHHHHTHHHHHHHHHHTTC--CEE---EEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hc--ccCCCCceEEEECchHHhhHHHHHHHHHHcCC--eec---ccCcCHHHHHHHHHHh
Confidence 4445555555555555 22 222 56789999998876 667777766532 222 3568899999999864
No 109
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=62.93 E-value=3.7 Score=42.32 Aligned_cols=19 Identities=32% Similarity=0.364 Sum_probs=17.0
Q ss_pred CCCEEEEEccccceEEEEE
Q 009882 6 EGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (523)
+..++|||+|||+++++++
T Consensus 4 ~~~~lgIDiGtts~k~~l~ 22 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIF 22 (506)
T ss_dssp CCEEEEEEECSSEEEEEEE
T ss_pred CCEEEEEEcCCCceEEEEE
Confidence 4579999999999999887
No 110
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=62.62 E-value=84 Score=34.80 Aligned_cols=57 Identities=11% Similarity=0.150 Sum_probs=38.9
Q ss_pred CHHHHHHHHHHHHHc-CC--ceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEE
Q 009882 140 NDSQRQATKDAGVIA-GL--NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (523)
Q Consensus 140 ~~~qr~~l~~A~~~a-Gl--~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (523)
...-.+.+++|...- ++ +++.++|...|++++..... ..+.+-+=+|.|+=-..+..
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~------~~~~iglIlGTG~na~y~e~ 689 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE------PTCEVGLIVGTGSNACYMEE 689 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC------TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC------CCcEEEEEEeCCeeEEEEEc
Confidence 445577788887654 55 58999999999988765442 23667777788766554444
No 111
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=62.03 E-value=3.6 Score=42.67 Aligned_cols=19 Identities=32% Similarity=0.258 Sum_probs=17.0
Q ss_pred CCCEEEEEccccceEEEEE
Q 009882 6 EGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (523)
.++++|||+|||+++++++
T Consensus 3 kkYvlgID~GTss~Ka~l~ 21 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVM 21 (526)
T ss_dssp CCEEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccccceeeeEE
Confidence 4689999999999998876
No 112
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=61.73 E-value=9 Score=36.09 Aligned_cols=61 Identities=13% Similarity=0.083 Sum_probs=36.5
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHH-HcCC-ceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcce
Q 009882 127 TIKNAVVTVPAYFNDSQRQATKDAGV-IAGL-NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTF 196 (523)
Q Consensus 127 ~~~~~VitVPa~~~~~qr~~l~~A~~-~aGl-~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~ 196 (523)
.+..+.|++|..- ......+++..+ ..++ ..+.+.++..||+++-. . .+..+++=+|.|.-
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~---g-----~~~~v~v~~GTGig 121 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC---G-----DSEGIACILGTGSN 121 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT---T-----TSCEEEEEESSSEE
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc---C-----CCCcEEEEecCChh
Confidence 4567889999864 222234544444 3454 36889999999998742 1 12344444676653
No 113
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=61.31 E-value=17 Score=35.79 Aligned_cols=49 Identities=18% Similarity=0.134 Sum_probs=33.3
Q ss_pred CcceEEEecCccCcHH-HHHHHHHhhCCc---ccccCCCCchhhHhHHHHHHH
Q 009882 321 TVHDVVLVGGSTRIPK-VQQLLQDFFNGK---ELCKNINPDEAVAYGAAVQAA 369 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p~-v~~~l~~~f~~~---~v~~~~~p~~aVa~Gaa~~a~ 369 (523)
+++.|+|.||.+..+. +.+.+++.+... .+........+.++||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 4789999999887544 778887777422 233333334689999997753
No 114
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=60.98 E-value=4.2 Score=41.96 Aligned_cols=19 Identities=21% Similarity=0.027 Sum_probs=17.3
Q ss_pred CCCEEEEEccccceEEEEE
Q 009882 6 EGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (523)
+..++|||+|||+++++++
T Consensus 4 m~~~lgIDiGtts~k~~l~ 22 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALA 22 (511)
T ss_dssp CCEEEEEEECSSEEEEEEE
T ss_pred ccEEEEEEeCCCceEEEEE
Confidence 5689999999999999887
No 115
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=60.85 E-value=3.7 Score=43.09 Aligned_cols=19 Identities=26% Similarity=0.296 Sum_probs=16.4
Q ss_pred CCCEEEEEccccceEEEEE
Q 009882 6 EGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (523)
+..++|||+|||+++++++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~ 22 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLI 22 (572)
T ss_dssp -CEEEEEEECSSEEEEEEE
T ss_pred CCEEEEEecCCcceEEEEE
Confidence 4579999999999998877
No 116
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=59.58 E-value=66 Score=35.66 Aligned_cols=55 Identities=15% Similarity=0.228 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHcC-Cc--eeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEE
Q 009882 142 SQRQATKDAGVIAG-LN--VMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (523)
Q Consensus 142 ~qr~~l~~A~~~aG-l~--~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (523)
.-++.+.++...-| ++ ++.++|+..|++++-.... .++++.+=+|.|+=-.-+..
T Consensus 184 ~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~------~~~~iglilGTGvngg~i~~ 241 (917)
T 1cza_N 184 DVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDD------QHCEVGLIIGTGTNACYMEE 241 (917)
T ss_dssp BHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHC------TTEEEEEEESSSEEEEEEEE
T ss_pred chHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccC------CCcEEEEEEECCcceEEEec
Confidence 45677777777666 54 6899999999999764432 24677777888754444433
No 117
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=59.40 E-value=4.5 Score=41.76 Aligned_cols=19 Identities=32% Similarity=0.258 Sum_probs=17.0
Q ss_pred CCCEEEEEccccceEEEEE
Q 009882 6 EGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (523)
+..++|||+|||+++++++
T Consensus 2 ~~~~lgIDiGtts~k~~l~ 20 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVM 20 (510)
T ss_dssp CCEEEEEEECSSEEEEEEE
T ss_pred CcEEEEEEcCCcceEEEEE
Confidence 4579999999999999887
No 118
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=58.44 E-value=5.9 Score=38.06 Aligned_cols=71 Identities=13% Similarity=0.100 Sum_probs=39.5
Q ss_pred cHHHHHHHHHHHHH----HHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCccc---ccCCCCchhhH
Q 009882 289 TRARFEELNMDLFR----KCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKEL---CKNINPDEAVA 361 (523)
Q Consensus 289 tr~~~e~~~~~~~~----~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v---~~~~~p~~aVa 361 (523)
+.++.+++.+.+++ .|.+.+.+.+++.+ ++.|+.+||+ +++...+.+.++-..+ ..+.+.+-+.|
T Consensus 244 ~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~-----~~~vv~aG~G---~~L~~~la~~~~~~~~~~~i~~~~s~vapA 315 (334)
T 3cet_A 244 SEIDAENIAKNYYELWKELILENVENVAEKYG-----SKKVVITGLG---ENILKDALADFEVISVAERYGKDVSLATPS 315 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCEEEEESTT---HHHHHHHTTTSEEEEHHHHHCHHHHHSHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCeEEEeCCc---HHHHHHHHhhCCeeehhcccCcccccccCH
Confidence 55666665555544 44445555555443 3479999987 4666666554211100 10223456788
Q ss_pred hHHHHH
Q 009882 362 YGAAVQ 367 (523)
Q Consensus 362 ~Gaa~~ 367 (523)
.|+|++
T Consensus 316 ~avA~l 321 (334)
T 3cet_A 316 FAVAEL 321 (334)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999865
No 119
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=58.33 E-value=4.4 Score=42.17 Aligned_cols=19 Identities=21% Similarity=0.109 Sum_probs=17.0
Q ss_pred CCCEEEEEccccceEEEEE
Q 009882 6 EGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (523)
+..++|||+|||.++++++
T Consensus 9 ~~~~lgID~GTts~Ka~l~ 27 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAV 27 (538)
T ss_dssp CCEEEEEEECSSEEEEEEE
T ss_pred CCEEEEEEEcCcCEEEEEE
Confidence 4689999999999998877
No 120
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=56.58 E-value=35 Score=34.69 Aligned_cols=53 Identities=19% Similarity=0.327 Sum_probs=33.1
Q ss_pred CCeEEEEEEeCCcceEEEEEEEeCC-eEEEEE----ecCCCCCc-hHHHHHHHHHHHHH
Q 009882 182 GEKNVLIFDLGGGTFDVSLLTIEEG-IFEVKA----TAGDTHLG-GEDFDNRMVNHFVQ 234 (523)
Q Consensus 182 ~~~~vlV~D~GggT~Dvsv~~~~~~-~~~v~~----~~~~~~lG-G~~id~~l~~~l~~ 234 (523)
+...+|.+|+||.++-+.++++.++ .+++.. ...+...| |..+=..|++.+.+
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~ 136 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKE 136 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEECCTTGGGSBHHHHHHHHHHHHHH
T ss_pred cceEEEEEEecCCeEEEEEEEECCCCceEEEEEEEecCchhccCCHHHHHHHHHHHHHH
Confidence 3457999999999999999999765 343332 22333334 44444445554443
No 121
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=55.44 E-value=5.7 Score=40.80 Aligned_cols=18 Identities=28% Similarity=0.287 Sum_probs=15.8
Q ss_pred CCEEEEEccccceEEEEE
Q 009882 7 GPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 7 ~~vvGID~GTt~s~va~~ 24 (523)
..++|||+|||+++++++
T Consensus 2 ~~~lgiDiGtT~~k~~l~ 19 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILF 19 (495)
T ss_dssp -CEEEEEECSSEEEEEEE
T ss_pred cEEEEEeeCCcceEEEEE
Confidence 368999999999999887
No 122
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=55.14 E-value=15 Score=37.01 Aligned_cols=45 Identities=22% Similarity=0.352 Sum_probs=27.2
Q ss_pred ceeeeechhHHHHHhc-----ccccccCCCCCeEEEEEEeCCcceEEEEEE
Q 009882 157 NVMRIINEPTAAAIAY-----GLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (523)
Q Consensus 157 ~~~~li~Ep~Aaa~~~-----~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (523)
..+++|+..+=+.++| .+..-.. .....+.++|+|||++.++...
T Consensus 150 ~~v~iisG~eEg~y~wi~vnyllg~l~~-~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 150 QGAKIITGQEEGAYGWITINYLLGRFKT-PGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTC----CCCCEEEEECSSEEEEEECC
T ss_pred CceEECCchhhhhhhHHHHHhhhccccC-CCCCceEEEecCCCceEEEecc
Confidence 3577887665554444 2222100 0234678999999999998654
No 123
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=54.77 E-value=5.9 Score=33.41 Aligned_cols=17 Identities=35% Similarity=0.487 Sum_probs=15.7
Q ss_pred CEEEEEccccceEEEEE
Q 009882 8 PAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 8 ~vvGID~GTt~s~va~~ 24 (523)
.++|||+|+..+++|+.
T Consensus 4 riLGiDpG~~riGvAv~ 20 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALS 20 (150)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred EEEEEEccCCEEEEEEE
Confidence 48999999999999987
No 124
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=53.03 E-value=64 Score=32.48 Aligned_cols=53 Identities=13% Similarity=0.164 Sum_probs=34.4
Q ss_pred CCeEEEEEEeCCcceEEEEEEEeCCe---EEEEEecCCCCC---chHHHHHHHHHHHHH
Q 009882 182 GEKNVLIFDLGGGTFDVSLLTIEEGI---FEVKATAGDTHL---GGEDFDNRMVNHFVQ 234 (523)
Q Consensus 182 ~~~~vlV~D~GggT~Dvsv~~~~~~~---~~v~~~~~~~~l---GG~~id~~l~~~l~~ 234 (523)
+...++.+|+||.++-+.++...+.. +......-...+ ++..+=..|++.+.+
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~ 117 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAA 117 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHH
Confidence 44578999999999999999988765 222222222232 566665566665544
No 125
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=52.09 E-value=7 Score=40.12 Aligned_cols=18 Identities=22% Similarity=0.261 Sum_probs=16.3
Q ss_pred CCEEEEEccccceEEEEE
Q 009882 7 GPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 7 ~~vvGID~GTt~s~va~~ 24 (523)
..++|||+|||+++++++
T Consensus 3 ~~~lgiDiGtt~~k~~l~ 20 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIF 20 (497)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred cEEEEEecCCchhEEEEE
Confidence 468999999999999887
No 126
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=51.94 E-value=6 Score=40.69 Aligned_cols=18 Identities=22% Similarity=0.191 Sum_probs=16.3
Q ss_pred CCEEEEEccccceEEEEE
Q 009882 7 GPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 7 ~~vvGID~GTt~s~va~~ 24 (523)
..++|||+|||+++++++
T Consensus 4 ~~~lgIDiGtT~~k~~l~ 21 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFY 21 (503)
T ss_dssp EEEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeCCcceEEEEE
Confidence 468999999999999887
No 127
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=50.49 E-value=30 Score=32.65 Aligned_cols=50 Identities=18% Similarity=0.183 Sum_probs=32.2
Q ss_pred CcceEEEecCccCcH----HHHHHHHHhhCC------------cccccCCCCchhhHhHHHHHHHH
Q 009882 321 TVHDVVLVGGSTRIP----KVQQLLQDFFNG------------KELCKNINPDEAVAYGAAVQAAI 370 (523)
Q Consensus 321 ~i~~ViLvGG~s~~p----~v~~~l~~~f~~------------~~v~~~~~p~~aVa~Gaa~~a~~ 370 (523)
+++.|+|-||.++.+ .+++.+++.... ..+....-.+.+.++|||.++..
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~~ 289 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQ 289 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHHH
Confidence 367899999988754 455555554311 12333445567999999988753
No 128
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=50.49 E-value=29 Score=33.83 Aligned_cols=20 Identities=20% Similarity=0.117 Sum_probs=16.7
Q ss_pred CCCEEEEEccccceEEEEEe
Q 009882 6 EGPAIGIDLGTTYSCVGVWT 25 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~ 25 (523)
+..++|||+|.|++.++++.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d 47 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVR 47 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEe
Confidence 35689999999999988763
No 129
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=50.14 E-value=8.2 Score=39.65 Aligned_cols=18 Identities=33% Similarity=0.298 Sum_probs=16.5
Q ss_pred CCEEEEEccccceEEEEE
Q 009882 7 GPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 7 ~~vvGID~GTt~s~va~~ 24 (523)
..++|||+|||+++++++
T Consensus 6 ~~~lgIDiGtts~k~~l~ 23 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILF 23 (501)
T ss_dssp CEEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeCccceEEEEE
Confidence 479999999999999887
No 130
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=50.11 E-value=8.4 Score=36.34 Aligned_cols=21 Identities=29% Similarity=0.318 Sum_probs=15.4
Q ss_pred CCCCCEEEEEccccceEEEEE
Q 009882 4 KGEGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 4 ~~~~~vvGID~GTt~s~va~~ 24 (523)
+++...+|||+|+|.+++++.
T Consensus 17 ~~~~~~iGIDiGsTt~K~V~~ 37 (287)
T 2ews_A 17 RGSHMKVGIDAGGTLIKIVQE 37 (287)
T ss_dssp ----CEEEEEECSSEEEEEEE
T ss_pred CCCCeEEEEEEChhhEEEEEE
Confidence 346679999999999998774
No 131
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=49.88 E-value=62 Score=30.90 Aligned_cols=18 Identities=33% Similarity=0.375 Sum_probs=15.7
Q ss_pred CCEEEEEccccceEEEEE
Q 009882 7 GPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 7 ~~vvGID~GTt~s~va~~ 24 (523)
..++|||+|+|++.++++
T Consensus 30 ~~~lgiDiGgt~i~~~l~ 47 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIV 47 (343)
T ss_dssp EEEEEEEECSSEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEE
Confidence 468999999999998776
No 132
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=44.76 E-value=11 Score=38.60 Aligned_cols=16 Identities=50% Similarity=0.499 Sum_probs=14.9
Q ss_pred EEEEEccccceEEEEE
Q 009882 9 AIGIDLGTTYSCVGVW 24 (523)
Q Consensus 9 vvGID~GTt~s~va~~ 24 (523)
++|||+|||+++++++
T Consensus 2 ~lgiDiGtt~~k~~l~ 17 (484)
T 2itm_A 2 YIGIDLGTSGVKVILL 17 (484)
T ss_dssp EEEEEECSSEEEEEEE
T ss_pred EEEEEecCcccEEEEE
Confidence 6999999999999887
No 133
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=43.25 E-value=2.8 Score=39.71 Aligned_cols=64 Identities=11% Similarity=0.020 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCC--cccccCCCCchhhHhHHHHHHH
Q 009882 299 DLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNG--KELCKNINPDEAVAYGAAVQAA 369 (523)
Q Consensus 299 ~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~--~~v~~~~~p~~aVa~Gaa~~a~ 369 (523)
.++++..+.+-..+ .... ..+.+.|+|.||.+.. +.+.+++.+.. .++. .+..+.+.||++++.
T Consensus 212 ~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~---~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 212 QLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIG---KILQSPMEGLIQYHS 277 (291)
T ss_dssp HHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEE---EECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEe---ecCCCHHHHHHHHHH
Confidence 44555555554444 2222 1156789999998875 56666666633 1222 345788899998753
No 134
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=42.91 E-value=20 Score=26.90 Aligned_cols=28 Identities=18% Similarity=0.237 Sum_probs=25.6
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCce
Q 009882 131 AVVTVPAYFNDSQRQATKDAGVIAGLNV 158 (523)
Q Consensus 131 ~VitVPa~~~~~qr~~l~~A~~~aGl~~ 158 (523)
-.++.|+.++..+|..+.+.|+..||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 3788999999999999999999999864
No 135
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=42.37 E-value=14 Score=31.28 Aligned_cols=17 Identities=35% Similarity=0.507 Sum_probs=15.4
Q ss_pred CEEEEEccccceEEEEE
Q 009882 8 PAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 8 ~vvGID~GTt~s~va~~ 24 (523)
.++|||.|+++++.++.
T Consensus 2 ~ILGIDPGl~~tG~gvi 18 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVI 18 (158)
T ss_dssp EEEEEECCSSEEEEEEE
T ss_pred EEEEEccCCCCeeEEEE
Confidence 48999999999999887
No 136
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=42.31 E-value=11 Score=38.65 Aligned_cols=17 Identities=41% Similarity=0.387 Sum_probs=15.7
Q ss_pred CEEEEEccccceEEEEE
Q 009882 8 PAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 8 ~vvGID~GTt~s~va~~ 24 (523)
.++|||+|||+++++++
T Consensus 3 ~~lgiDiGtts~k~~l~ 19 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVF 19 (504)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred EEEEEecCCcceEEEEE
Confidence 58999999999999887
No 137
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=40.93 E-value=16 Score=31.34 Aligned_cols=17 Identities=41% Similarity=0.431 Sum_probs=15.6
Q ss_pred CEEEEEccccceEEEEE
Q 009882 8 PAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 8 ~vvGID~GTt~s~va~~ 24 (523)
.++|||.|+++++.++.
T Consensus 2 rILGIDPGl~~tG~gvi 18 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVV 18 (166)
T ss_dssp EEEEEECCSSEEEEEEE
T ss_pred EEEEEccccCceEEEEE
Confidence 48999999999999987
No 138
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=40.21 E-value=66 Score=24.27 Aligned_cols=55 Identities=20% Similarity=0.295 Sum_probs=32.3
Q ss_pred CcEEEEEEecCccccccCcceeEEEEeCCCCCCCCcceEEEEEEecCCceEEEEEEEcCCCceeeEEcC
Q 009882 427 PGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTAKRTRSQSP 495 (523)
Q Consensus 427 ~~~~i~i~~g~~~~~~~~~~ig~~~i~~~~~~~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~ 495 (523)
+...+.|+|......+....-|-|.|++++.. ...|.|.|+++|. +|++..++.+
T Consensus 25 s~A~V~v~qnG~~iy~~~VppGpF~I~dl~~~-------------~~~Gdl~V~v~ea-dG~~~~~~vp 79 (90)
T 3fcg_A 25 TQARVEVLRDGYTVSNELVPSGPFELANLPLG-------------GGSGELKVIIHES-DGTKQVFTVP 79 (90)
T ss_dssp SSEEEEEESSSCEEEEEEECSEEEEECCCC----------------CCEEEEEEEECT-TSCEEEEEEE
T ss_pred CCcEEEEEECCEEEEEeEeCCCCeEEcCCccc-------------CCceeEEEEEEEC-CCCEEEEEEC
Confidence 34667777765554455556788888877642 3356667777664 5555544443
No 139
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=39.77 E-value=13 Score=39.04 Aligned_cols=47 Identities=23% Similarity=0.452 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCC--CCcceEEEecCccCcHHHHHHHHHhh
Q 009882 299 DLFRKCMEPVEKCLRDAKMDK--STVHDVVLVGGSTRIPKVQQLLQDFF 345 (523)
Q Consensus 299 ~~~~~~~~~i~~~l~~~~~~~--~~i~~ViLvGG~s~~p~v~~~l~~~f 345 (523)
|+=+.|++-|..+......++ .=.+.|++|||+|.+|.+.-.|.++.
T Consensus 476 pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri 524 (655)
T 4am6_A 476 PLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRI 524 (655)
T ss_dssp CHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHH
Confidence 444455555554443222222 12567999999999999999998876
No 140
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=36.62 E-value=1e+02 Score=31.08 Aligned_cols=26 Identities=38% Similarity=0.621 Sum_probs=21.5
Q ss_pred CCeEEEEEEeCCcceEEEEEEEeCCe
Q 009882 182 GEKNVLIFDLGGGTFDVSLLTIEEGI 207 (523)
Q Consensus 182 ~~~~vlV~D~GggT~Dvsv~~~~~~~ 207 (523)
+...+|.+|+||.++-|..+++.++.
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~~ 100 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEGE 100 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC--
T ss_pred cceEEEEEEecCceEEEEEEEECCCC
Confidence 44579999999999999999997653
No 141
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=36.42 E-value=1.1e+02 Score=31.98 Aligned_cols=99 Identities=15% Similarity=0.130 Sum_probs=63.1
Q ss_pred eEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCC--CCchHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Q 009882 184 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDT--HLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERA 261 (523)
Q Consensus 184 ~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~--~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~ 261 (523)
..=+-+|+|..|+-..++....+..--.....+. ..|.+-+++.-+. ..+
T Consensus 206 ~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a-~~~--------------------------- 257 (631)
T 3zyy_X 206 VFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYV-DEN--------------------------- 257 (631)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHH-HHC---------------------------
T ss_pred ceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHH-hcC---------------------------
Confidence 3558999999999999999877755333333333 4666655543221 100
Q ss_pred hhhcCCCceeEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHH
Q 009882 262 KRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQ 338 (523)
Q Consensus 262 K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~ 338 (523)
..-++++-+-+++.+-+++.++++++++...+|..+.++|-.+..-++.
T Consensus 258 ----------------------------~~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~hLll 306 (631)
T 3zyy_X 258 ----------------------------PDGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTHLFL 306 (631)
T ss_dssp ----------------------------TTHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHHHHH
T ss_pred ----------------------------cccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHHHHc
Confidence 0112233334556666777888888999999999999999776544443
No 142
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=34.57 E-value=52 Score=32.45 Aligned_cols=45 Identities=9% Similarity=-0.010 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCcc-CcHHHHHHHHHhh
Q 009882 297 NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGST-RIPKVQQLLQDFF 345 (523)
Q Consensus 297 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f 345 (523)
++-+..++...|-...... ..+|.|+++||-+ +.+.+|+.+.+.+
T Consensus 302 ~d~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 302 LEIFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 3444555555555554443 3589999999999 9999999999755
No 143
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=33.84 E-value=79 Score=30.04 Aligned_cols=50 Identities=32% Similarity=0.442 Sum_probs=31.8
Q ss_pred HHcCCceeeeechhHHHHHhcccccc--------cCCCCCeEEEEEEeCCcceEEEEEE
Q 009882 152 VIAGLNVMRIINEPTAAAIAYGLDKK--------ATSVGEKNVLIFDLGGGTFDVSLLT 202 (523)
Q Consensus 152 ~~aGl~~~~li~Ep~Aaa~~~~~~~~--------~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (523)
+..|++.+.+.++-.|+|++-..... ......++++++-+|.| +-..++.
T Consensus 99 ~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTG-iG~giv~ 156 (332)
T 1sz2_A 99 KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTG-LGVAHLV 156 (332)
T ss_dssp HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSS-EEEEEEE
T ss_pred HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCcc-ceEEEEe
Confidence 34588778999999999987533210 00123457888899987 3444444
No 144
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=33.59 E-value=42 Score=32.13 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=25.2
Q ss_pred eeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEE
Q 009882 160 RIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (523)
Q Consensus 160 ~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (523)
....-|.|.|........ ...+++|+||.|||+..+.
T Consensus 109 ~aaanw~ASa~~~A~~~~------~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 109 VSASNWCGTAKWVSKNIE------ENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp TBCCSSHHHHHHHHHHTC------SSEEEEEECSSCEEEEEEE
T ss_pred HHhcCHHHHHHHHHHhcC------CCEEEEEcCcchhhhhhhc
Confidence 445667777663222211 2479999999999999887
No 145
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=33.52 E-value=56 Score=30.72 Aligned_cols=48 Identities=15% Similarity=0.097 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhC
Q 009882 296 LNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN 346 (523)
Q Consensus 296 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~ 346 (523)
+++...+.+.+.++++|++++++..+|++|+.-|++.++ -+.+.+.|+
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 259 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 344456677888999999999999999999999987764 456788774
No 146
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=32.45 E-value=3.7e+02 Score=26.32 Aligned_cols=46 Identities=7% Similarity=0.038 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCcc-CcHHHHHHHHHhh
Q 009882 296 LNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGST-RIPKVQQLLQDFF 345 (523)
Q Consensus 296 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f 345 (523)
.++-+..++...|-......+ .+|.|+++||-+ +.+.+|+.+.+.+
T Consensus 305 A~d~f~yri~k~IGa~aa~L~----GvDaIVFTgGIGEns~~vR~~i~~~l 351 (404)
T 4h0o_A 305 AFDVYIKQLAKTIGGLMVEIG----GLDLLVFTDQMGLEVWQVRKAICDKM 351 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT----CCSEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhc----CCCEEEECCccccCcHHHHHHHHhhh
Confidence 344445555555554444332 389999999974 7799999999876
No 147
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=32.30 E-value=1.5e+02 Score=29.62 Aligned_cols=23 Identities=39% Similarity=0.625 Sum_probs=20.9
Q ss_pred CeEEEEEEeCCcceEEEEEEEeC
Q 009882 183 EKNVLIFDLGGGTFDVSLLTIEE 205 (523)
Q Consensus 183 ~~~vlV~D~GggT~Dvsv~~~~~ 205 (523)
...++.+|+||.++-+.+++..+
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEECC
T ss_pred cceEEEEEeCCCeEEEEEEecCC
Confidence 46789999999999999999976
No 148
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=31.81 E-value=22 Score=36.70 Aligned_cols=43 Identities=9% Similarity=0.072 Sum_probs=31.5
Q ss_pred cEEEEeCCCCCHHHHHHHHHHHHHcCCceeee-echhHHHHHhc
Q 009882 130 NAVVTVPAYFNDSQRQATKDAGVIAGLNVMRI-INEPTAAAIAY 172 (523)
Q Consensus 130 ~~VitVPa~~~~~qr~~l~~A~~~aGl~~~~l-i~Ep~Aaa~~~ 172 (523)
.++.-+|..++...-.++.+++...|++.... +.--.+..+..
T Consensus 132 ~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~~i~q~dd~vli~n 175 (607)
T 1nbw_A 132 GWIVLIDDAVDFLDAVWWLNEALDRGINVVAAILKKDDGVLVNN 175 (607)
T ss_dssp CEEEEECSSSCHHHHHHHHHHHHHTTCCEEEEEESSSCHHHHHT
T ss_pred CEEEECCCccCHHHHHHHHHHHHHcCCcEEEEEEecCCEEEEcc
Confidence 45555999999999999999999999976543 33344444444
No 149
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=31.39 E-value=1.5e+02 Score=29.67 Aligned_cols=30 Identities=30% Similarity=0.628 Sum_probs=24.2
Q ss_pred CCeEEEEEEeCCcceEEEEEEEeCCeEEEEE
Q 009882 182 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKA 212 (523)
Q Consensus 182 ~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~ 212 (523)
+...+|.+|+||.++-|.++++.++ +++..
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~ 86 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQITS 86 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEEE
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEEE
Confidence 3457999999999999999999766 55443
No 150
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=28.53 E-value=71 Score=30.40 Aligned_cols=44 Identities=16% Similarity=0.114 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhh
Q 009882 299 DLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 345 (523)
Q Consensus 299 ~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f 345 (523)
-..+.+.+.++++|++++++..+|++|+.-|++.++ -+.+.+.|
T Consensus 228 ~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~l 271 (339)
T 1mzj_A 228 WAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHh
Confidence 345677788999999999999999999999887763 44677777
No 151
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=28.24 E-value=74 Score=29.95 Aligned_cols=46 Identities=11% Similarity=0.047 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhC
Q 009882 298 MDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN 346 (523)
Q Consensus 298 ~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~ 346 (523)
+-..+.+.+.++++|++++++..+|++|+.-|++.++ -+.+.+.|+
T Consensus 216 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 261 (322)
T 1ub7_A 216 KFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLG 261 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 3445677788999999999999999999999987664 456777773
No 152
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=28.03 E-value=77 Score=30.05 Aligned_cols=45 Identities=20% Similarity=0.284 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhC
Q 009882 299 DLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN 346 (523)
Q Consensus 299 ~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~ 346 (523)
-..+.+.+.++++|++++++..+|++++.-+++.++ -+.+.+.|+
T Consensus 221 ~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 265 (331)
T 2x3e_A 221 QAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLD 265 (331)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 445677788999999999999999999999887764 455777773
No 153
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=27.87 E-value=56 Score=32.30 Aligned_cols=26 Identities=15% Similarity=0.396 Sum_probs=23.7
Q ss_pred CCcceEEEecCcc-CcHHHHHHHHHhh
Q 009882 320 STVHDVVLVGGST-RIPKVQQLLQDFF 345 (523)
Q Consensus 320 ~~i~~ViLvGG~s-~~p~v~~~l~~~f 345 (523)
..+|.|+++||-+ +.+.+|+.+.+.+
T Consensus 329 ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 329 HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred CCCCEEEECccccccCHHHHHHHHhhH
Confidence 4699999999999 9999999999866
No 154
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=27.10 E-value=88 Score=29.21 Aligned_cols=47 Identities=9% Similarity=0.071 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhC
Q 009882 297 NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN 346 (523)
Q Consensus 297 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~ 346 (523)
.+.....+...++++|++++++..+|+++++-+++.++ -+.+.+.|+
T Consensus 207 ~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 253 (313)
T 1zow_A 207 FKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLG 253 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 33455677788999999999999999999999887753 445677773
No 155
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=26.42 E-value=25 Score=32.92 Aligned_cols=59 Identities=14% Similarity=0.050 Sum_probs=32.8
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHHH-HcCC-ceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcc
Q 009882 128 IKNAVVTVPAYFNDSQRQATKDAGV-IAGL-NVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGT 195 (523)
Q Consensus 128 ~~~~VitVPa~~~~~qr~~l~~A~~-~aGl-~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT 195 (523)
+..+.|++|..- ......+++..+ ..++ ..+.+.++..||+++-. . .+..+++=+|.|.
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~---g-----~~~~v~v~~GTGi 118 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC---G-----QKAGIACILGTGS 118 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT---T-----TSCBEEEEESSSE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc---C-----CCCcEEEEeCCCh
Confidence 345788888764 222224444433 3454 36889999999998642 1 1223444477776
No 156
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=26.18 E-value=59 Score=29.79 Aligned_cols=47 Identities=19% Similarity=0.203 Sum_probs=30.0
Q ss_pred cceEEEecCccCc-HHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHHHH
Q 009882 322 VHDVVLVGGSTRI-PKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAIL 371 (523)
Q Consensus 322 i~~ViLvGG~s~~-p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~~~ 371 (523)
++.|+|-||.+.. +.+.+.++ ...++....-.+.+.++|||.++...
T Consensus 215 P~~IvlgG~i~~~~~~~~~~~~---~~~~i~~s~l~~~a~~~GAa~l~~~~ 262 (267)
T 1woq_A 215 PELFIVGGGISKRADEYLPNLR---LRTPIVPAVLRNEAGIVGAAIEIALQ 262 (267)
T ss_dssp CSEEEEESGGGGGGGGTGGGCC---CSSCEEECSCSTTHHHHHHHHHHHHH
T ss_pred CCEEEEeChhhcccHHHHHhhc---cCceEEECCcCCcHHHHHHHHHHHhc
Confidence 5689999998764 33433333 12344444455778999999887543
No 157
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=25.97 E-value=78 Score=29.51 Aligned_cols=45 Identities=22% Similarity=0.196 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhC
Q 009882 299 DLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN 346 (523)
Q Consensus 299 ~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~ 346 (523)
...+...+.++++|++++++..+|+++++-|+++++ -+.+.+.|+
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg 251 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLN 251 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 445567788999999999999999999999987764 345777773
No 158
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=24.65 E-value=39 Score=31.34 Aligned_cols=71 Identities=13% Similarity=0.175 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhhCCcccccCCCCchhhHhHHHHHHH
Q 009882 290 RARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAA 369 (523)
Q Consensus 290 r~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~Gaa~~a~ 369 (523)
+...+.+-..++......|+..+++.......--.|+++||.+.+ +...++.. ...+|+ -+-.|..+...
T Consensus 182 ~nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~~~~vi~TGG~a~~------l~~~~~~~---~~~~~~-LvL~GL~~i~~ 251 (268)
T 2h3g_X 182 KNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVIATGGLAKL------ISEESNVI---DVVDPF-LTLKGLYMLYE 251 (268)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCEEEEESTTHHH------HHHHCSSC---SEECTT-HHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCHHH------HHhhCCCC---CEECcc-hHHHHHHHHHH
Confidence 334444445555555555554444331111112379999998864 44444221 223443 56678877655
Q ss_pred H
Q 009882 370 I 370 (523)
Q Consensus 370 ~ 370 (523)
.
T Consensus 252 ~ 252 (268)
T 2h3g_X 252 R 252 (268)
T ss_dssp H
T ss_pred h
Confidence 3
No 159
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=23.51 E-value=33 Score=32.50 Aligned_cols=44 Identities=11% Similarity=0.120 Sum_probs=26.5
Q ss_pred HcCCceeeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEE
Q 009882 153 IAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLL 201 (523)
Q Consensus 153 ~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 201 (523)
..|++ +.+.++..|||++...... ....+++++-+|.| .-..++
T Consensus 106 ~~~~p-v~v~NDanaaa~~e~~~~~---~~~~~~~~v~~GtG-iG~gii 149 (310)
T 3htv_A 106 TLNCP-VEFSRDVNLQLSWDVVENR---LTQQLVLAAYLGTG-MGFAVW 149 (310)
T ss_dssp HHTSC-EEEEEHHHHHHHHHHHHTT---CTTSCEEEEEESSS-EEEEEE
T ss_pred HhCCC-EEEeeHHHHHHHHHHhhcc---cCCceEEEEEecee-EEEEEE
Confidence 34775 6789999999875422211 13356777778765 333444
No 160
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=23.33 E-value=58 Score=32.73 Aligned_cols=57 Identities=16% Similarity=0.160 Sum_probs=39.4
Q ss_pred CHHHHHHHHHHHHHcCCce--eeeechhHHHHHhcccccccCCCCCeEEEEEEeCCcceEEEEEE
Q 009882 140 NDSQRQATKDAGVIAGLNV--MRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLT 202 (523)
Q Consensus 140 ~~~qr~~l~~A~~~aGl~~--~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (523)
...-.+.+++|.+.-|+++ +.++|+..|++++..... ...++-+=+|.|+=-.-+..
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~------~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED------PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC------TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC------CCcEEEEEEeCCcceEEEEc
Confidence 3455778888887778863 589999999998765442 23667777888755444444
No 161
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=23.19 E-value=1.2e+02 Score=29.89 Aligned_cols=46 Identities=9% Similarity=0.077 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCcc-CcHHHHHHHHHhhC
Q 009882 297 NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGST-RIPKVQQLLQDFFN 346 (523)
Q Consensus 297 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f~ 346 (523)
++-+..++...|-......+ .+|.|+++||-+ +.+.+|+.+.+.+.
T Consensus 302 ~d~f~yri~k~IGa~~a~Lg----gvDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 302 LEIYDYRIAKYIGAYAAAMN----GVDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHT----CCSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCCEEEECcccccCCHHHHHHHHhhhh
Confidence 34445555555555544443 489999999999 99999999998773
No 162
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=23.11 E-value=1.9e+02 Score=26.90 Aligned_cols=27 Identities=30% Similarity=0.497 Sum_probs=21.5
Q ss_pred eEEEEEEeCCcceEEEEEEEeCCeEEE
Q 009882 184 KNVLIFDLGGGTFDVSLLTIEEGIFEV 210 (523)
Q Consensus 184 ~~vlV~D~GggT~Dvsv~~~~~~~~~v 210 (523)
..++.+|+|+..+.+.++...+..+..
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il~~ 32 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQQK 32 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEE
Confidence 478999999999999999876554433
No 163
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=22.97 E-value=1.8e+02 Score=27.17 Aligned_cols=51 Identities=12% Similarity=0.123 Sum_probs=33.4
Q ss_pred CeEEEEEEeCCcceEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHH
Q 009882 183 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQ 234 (523)
Q Consensus 183 ~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~ 234 (523)
+..++.+|+||..+.+.++...+..+......... .+...+-+.+.+.+.+
T Consensus 23 ~~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~~-~~~~~~~~~i~~~i~~ 73 (327)
T 2ap1_A 23 NAMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPH-TSYSAFLDAVCELVEE 73 (327)
T ss_dssp CCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCC-SCHHHHHHHHHHHHHH
T ss_pred CceEEEEEECCCEEEEEEEeCCCCEEEEEEecCCC-CCHHHHHHHHHHHHHH
Confidence 45689999999999999998766544433333322 2556666666666544
No 164
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=22.44 E-value=54 Score=31.90 Aligned_cols=48 Identities=27% Similarity=0.337 Sum_probs=29.5
Q ss_pred HcCCceeeeechhHHHHHhccccc-----------ccCCCCCeEEEEEEeCCcceEEEEEE
Q 009882 153 IAGLNVMRIINEPTAAAIAYGLDK-----------KATSVGEKNVLIFDLGGGTFDVSLLT 202 (523)
Q Consensus 153 ~aGl~~~~li~Ep~Aaa~~~~~~~-----------~~~~~~~~~vlV~D~GggT~Dvsv~~ 202 (523)
..|++ +.+.++..|+|++-.... .......++++++-+|.| +-.+++.
T Consensus 107 ~~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtG-IG~givi 165 (366)
T 3mcp_A 107 IFGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTG-FGAGVVI 165 (366)
T ss_dssp HHCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSS-EEEEEEE
T ss_pred HHCCC-EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCc-ceEEEEE
Confidence 34776 689999999998643221 001123467888888865 4445543
No 165
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=21.55 E-value=40 Score=32.18 Aligned_cols=19 Identities=21% Similarity=0.146 Sum_probs=16.3
Q ss_pred CCCEEEEEccccceEEEEE
Q 009882 6 EGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (523)
+..++|||+|.|++.++++
T Consensus 13 ~~~~lgiDiGGT~i~~~l~ 31 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALC 31 (332)
T ss_dssp -CEEEEEEEETTEEEEEEE
T ss_pred CCEEEEEEechhheEEEEE
Confidence 5679999999999998876
No 166
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=21.03 E-value=1.1e+02 Score=30.14 Aligned_cols=45 Identities=7% Similarity=0.037 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCcc-CcHHHHHHHHHhh
Q 009882 297 NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGST-RIPKVQQLLQDFF 345 (523)
Q Consensus 297 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f 345 (523)
++-+..++...|-...... .++|.|+++||-+ +.+.+++.|.+.+
T Consensus 303 ~d~f~yriak~Iga~aa~L----G~vDaIVfTGGIgEns~~vr~~I~~~l 348 (398)
T 4ijn_A 303 YDVYIHRLRKYIGAYMAVL----GRTDVISFTAGVGENVPPVRRDALAGL 348 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHh----CCCcEEEECCccccccHHHHHHHHHHH
Confidence 3344444544444443333 3589999999988 6788999999876
No 167
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=20.77 E-value=1.3e+02 Score=28.39 Aligned_cols=44 Identities=16% Similarity=0.089 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHHhh
Q 009882 299 DLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 345 (523)
Q Consensus 299 ~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f 345 (523)
.....+.+.++++|++++++..+||++++-++++++ -+.+.+.|
T Consensus 229 ~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~---~~~~~~~l 272 (335)
T 1u6e_A 229 WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI---NELLVKNL 272 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHc
Confidence 345677788999999999999999999999987764 34466666
No 168
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=20.59 E-value=51 Score=30.62 Aligned_cols=19 Identities=16% Similarity=0.128 Sum_probs=15.9
Q ss_pred CCCEEEEEccccceEEEEE
Q 009882 6 EGPAIGIDLGTTYSCVGVW 24 (523)
Q Consensus 6 ~~~vvGID~GTt~s~va~~ 24 (523)
+.+.+.||.|+|+++.+++
T Consensus 22 ~~M~L~IDiGNT~ik~g~~ 40 (271)
T 2f9w_A 22 ASMILELDCGNSLIKWRVI 40 (271)
T ss_dssp -CEEEEEEECSSCEEEEEE
T ss_pred cCcEEEEEeCCCeeEEEEE
Confidence 3468999999999998876
Done!