Query 009885
Match_columns 523
No_of_seqs 175 out of 417
Neff 5.0
Searched_HMMs 46136
Date Thu Mar 28 18:29:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009885.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009885hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2576 Glucosyltransferase - 100.0 1E-148 3E-153 1140.0 33.5 480 6-519 2-496 (500)
2 PF03155 Alg6_Alg8: ALG6, ALG8 100.0 5E-145 1E-149 1157.6 33.0 445 16-515 2-467 (469)
3 KOG2575 Glucosyltransferase - 100.0 6E-117 1E-121 907.6 32.1 441 13-517 36-497 (510)
4 TIGR03459 crt_membr carotene b 98.7 4E-07 8.6E-12 98.6 16.3 168 21-205 88-270 (470)
5 PF09594 DUF2029: Protein of u 98.4 2.6E-05 5.7E-10 75.2 19.7 155 62-251 2-162 (241)
6 COG5542 Predicted integral mem 97.8 0.00012 2.7E-09 78.1 10.7 154 61-237 93-248 (420)
7 PF13231 PMT_2: Dolichyl-phosp 97.7 0.0014 3E-08 58.9 14.4 124 62-204 1-132 (159)
8 COG5650 Predicted integral mem 97.6 9E-05 2E-09 81.2 5.7 187 32-238 104-294 (536)
9 PF05208 ALG3: ALG3 protein; 97.2 0.00095 2.1E-08 70.9 8.2 102 154-264 130-231 (368)
10 COG1807 ArnT 4-amino-4-deoxy-L 97.1 0.032 6.9E-07 61.4 18.5 180 1-204 1-195 (535)
11 PRK13279 arnT 4-amino-4-deoxy- 96.3 2.7 5.8E-05 47.6 26.9 155 55-237 56-225 (552)
12 PF10131 PTPS_related: 6-pyruv 96.1 1.1 2.3E-05 51.2 22.6 153 63-236 4-169 (616)
13 KOG2762 Mannosyltransferase [C 95.9 0.016 3.5E-07 61.3 6.5 102 154-264 158-259 (429)
14 PLN02841 GPI mannosyltransfera 95.2 0.3 6.6E-06 53.5 13.3 163 11-202 9-185 (440)
15 PF02366 PMT: Dolichyl-phospha 95.2 0.22 4.7E-06 49.3 11.2 96 98-194 80-189 (245)
16 PF06728 PIG-U: GPI transamida 94.6 0.97 2.1E-05 48.5 15.3 127 61-203 56-195 (382)
17 PF05007 Mannosyl_trans: Manno 92.3 0.38 8.3E-06 49.3 7.1 78 154-232 8-90 (259)
18 PF09852 DUF2079: Predicted me 92.0 2.3 5E-05 46.3 13.0 89 117-205 76-166 (449)
19 KOG3893 Mannosyltransferase [C 91.7 0.52 1.1E-05 49.8 7.3 153 60-235 76-237 (405)
20 PHA01514 O-antigen conversion 89.4 41 0.00089 37.7 24.8 218 3-257 4-238 (485)
21 PRK13375 pimE mannosyltransfer 89.1 39 0.00084 37.1 19.0 187 11-233 21-221 (409)
22 PF14897 EpsG: EpsG family 86.9 9 0.00019 38.5 12.0 141 29-200 21-161 (330)
23 PF04188 Mannosyl_trans2: Mann 86.0 9.8 0.00021 41.7 12.5 117 119-237 131-250 (443)
24 TIGR03766 conserved hypothetic 85.9 8.4 0.00018 42.6 12.0 99 100-206 139-255 (483)
25 TIGR03663 conserved hypothetic 82.2 85 0.0018 34.6 17.7 95 101-197 71-173 (439)
26 PF09913 DUF2142: Predicted me 74.8 62 0.0014 34.1 13.6 120 63-199 95-223 (389)
27 COG1928 PMT1 Dolichyl-phosphat 60.5 69 0.0015 37.5 10.9 142 51-200 61-222 (699)
28 COG1287 Uncharacterized membra 59.1 1.5E+02 0.0032 35.1 13.6 113 58-189 80-210 (773)
29 PF14264 Glucos_trans_II: Gluc 41.6 4E+02 0.0087 27.2 12.4 97 109-207 55-161 (319)
30 PF03901 Glyco_transf_22: Alg9 41.0 4.8E+02 0.01 27.9 15.5 101 100-201 81-195 (418)
31 COG3463 Predicted membrane pro 29.9 4.5E+02 0.0098 29.5 10.6 83 117-199 104-188 (458)
32 PF11028 DUF2723: Protein of u 25.4 6.4E+02 0.014 24.6 10.7 60 146-205 95-170 (178)
33 KOG2647 Predicted Dolichyl-pho 22.6 2.1E+02 0.0046 31.8 6.5 129 128-266 155-286 (444)
34 PF02516 STT3: Oligosaccharyl 22.3 9.5E+02 0.021 25.9 11.6 91 61-166 68-165 (483)
35 PF14805 THDPS_N_2: Tetrahydro 20.2 43 0.00093 28.0 0.6 12 354-365 52-66 (70)
No 1
>KOG2576 consensus Glucosyltransferase - Alg8p [Transcription]
Probab=100.00 E-value=1.2e-148 Score=1139.98 Aligned_cols=480 Identities=50% Similarity=0.924 Sum_probs=453.3
Q ss_pred hhHHHHHHH-HHHHHHHHHhcCCcccchhhhhhhHHHHhccCCCcccccccCCccCCCCCchhHHHHHHHhhhcc--ccC
Q 009885 6 STRQLLWFF-AIAVCVKLLLIPAYHSTDFEVHRHWLALTHSLPLSNWYADETSPWTLDYPPFFACFERFLSIFAH--YID 82 (523)
Q Consensus 6 ~~~~~~~~~-~~~~~lK~ll~P~y~S~DfE~~R~WmaiT~~LP~~~WY~~~ts~WtLDYPPl~Ay~~~llg~ia~--~~d 82 (523)
++++..|.+ ++++.+|++|+|+|+|||||||||||||||++|++|||+|.||||||||||||||+||.+|++|+ .+|
T Consensus 2 g~~~ll~~~~~~~t~lK~LLIP~Y~STDFEVHRNWLAIT~slPlseWY~eaTSeWTLDYPPFFAYFE~~LS~vA~ff~fD 81 (500)
T KOG2576|consen 2 GKRQLLWAFAIITTFLKCLLIPAYRSTDFEVHRNWLAITHSLPLSEWYYEATSEWTLDYPPFFAYFEWFLSQVAKFFGFD 81 (500)
T ss_pred chhHhHHHHHHHHHHHHheeeccccccchhhhhhHHHHhccCchHHHHHhcccceecCCCcHHHHHHHHHHHHHHHhcCC
Confidence 566677766 55579999999999999999999999999999999999999999999999999999999999999 789
Q ss_pred CceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHHHH---HHHhccch--hhhHHHHHHHHHccceeeecccchhhhhHH
Q 009885 83 PQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVY---RLTKNADV--KRRYLIWVLIVWSPALVMVDHLHFQYNGFL 157 (523)
Q Consensus 83 p~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~---~~~~~~~~--~~~~~~~~~~ll~P~llliDh~HFQYNg~l 157 (523)
|+|+++ .|.||+|.++++|||.|||++|++.++++. +..++.+| +++.+.+.++++|||++|||||||||||++
T Consensus 82 ~~ml~~-~~l~y~s~~tl~FQR~SVIf~dll~~~~~rr~~~l~~kl~k~~~~~~~~a~ll~~s~gLlIvDhIHFQYNgfL 160 (500)
T KOG2576|consen 82 PRMLDV-KNLNYFSRRTLYFQRFSVIFSDLLLLYGLRRSYRLTSKLGKDQKQRFACAVLLLLSPGLLIVDHIHFQYNGFL 160 (500)
T ss_pred chheec-cccCCCCcceEEEEeehhHHHHHHHHHHHhhhhcccccCCcccccchHHHHHHHhCCCcEEEEEeeeecccHH
Confidence 999999 779999999999999999999999999974 34445543 346677888999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhccc--c-hhhhhHHHHHHHHHHHHHHHhhh
Q 009885 158 LGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGL--V-RGFSRLSVLGAVVVAVFAAAYGP 234 (523)
Q Consensus 158 lGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~~~~~~~--~-~~~~~l~~lg~~Vi~tf~~~f~P 234 (523)
+|++++||.++.++|++++|+.|++++|||||++|+||+||+|+||.||..+. . .++.|.+|+|.+|+++|++++||
T Consensus 161 fgilLlSI~~l~~kr~l~~A~~fsvll~FKHIflY~ApaY~vylLr~Yc~~~nn~~~~~~~~vikL~~vv~~~F~~s~gP 240 (500)
T KOG2576|consen 161 FGILLLSIVFLKTKRYLLSAFLFSVLLNFKHIFLYVAPAYFVYLLRNYCLTSNNVFLANFLNVIKLGIVVLIPFAASFGP 240 (500)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhheeeechhHHHHHHHHHHhcccchhhhhhhhHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999743 2 26889999999999999999999
Q ss_pred hcccccccchhhhhccCCcccccccccCchhHhHHHHHHHHHHHHhhcccccccCCccccCccccccCCcccCCCCChhH
Q 009885 235 FLYHGQIQQVFNRMFPFGRGLCHAYWAPNFWVFYIILDKVFSFFLKKFGFSIQIPAASFTGGLVGDSSPFAVLPKISPST 314 (523)
Q Consensus 235 Fi~~~ql~Qvl~RLFPF~RGL~haywA~NfWa~yn~~dKvl~~~~~~l~~~~~~~~~s~t~glv~~~~~~~vLP~i~p~~ 314 (523)
|++.+|+||+++|||||+||||||||||||||+||++||++..+.+|+|...+.+++++|+|||||.+ |+|||+|+|..
T Consensus 241 f~~~~qlpqvlSRLFPfsRGLtHAYWAPNFWALYnf~Dk~l~~vl~kl~~~~~~~~as~tsGLVq~~~-hsVLp~itp~~ 319 (500)
T KOG2576|consen 241 FIYVQQLPQVLSRLFPFSRGLTHAYWAPNFWALYNFADKVLAVVLLKLKYGINFPTASYTSGLVQDSS-HSVLPQITPLA 319 (500)
T ss_pred HHHHHHhHHHHHHhCCcccccchhhccchHHHHHHHHHHHHHHHHHHccccccCCccccCCccccCcc-eeeccCCCchH
Confidence 99999999999999999999999999999999999999999999999999989999999999999999 99999999999
Q ss_pred HHHHHHHHHhhHHHHHhcCCC---hhhHHHHHHHhhhhccccccccchhhHHHhhhhHHHHhhcCccchhHHHHHhhhhh
Q 009885 315 TLIMVLLALSPCFIKAWTNPQ---PRMVARWIAYAYTCGFLFGWHVHEKASLHFVIPLAIVAVQSLEDAKHYFMLSIVSC 391 (523)
Q Consensus 315 t~~lTl~~~lP~l~~l~~~P~---~~~F~~~l~~~slsfFLFg~hVHEKaILl~~lP~~ll~~~~~~~~~~~~~ls~~~~ 391 (523)
|+++|++.++|+++++|++|+ +++|++++++|++++|+||||||||||||+++|++++...|+++++.|.+++++|+
T Consensus 320 TF~l~ll~~~p~l~~L~~~p~~~~~~vFl~~vtLcglssflfgwHVheKaiLm~ilp~~~ls~~~~~~l~~~~il~~~g~ 399 (500)
T KOG2576|consen 320 TFALTLLLILPFLIKLWFKPCVSIPLVFLGAVTLCGLSSFLFGWHVHEKAILMVILPLSILSVLDREDLMAFSILTIAGY 399 (500)
T ss_pred HHHHHHHHHHHHHHHHHhccccchhHHHHHHHHhccchhhhcchhHhHHHHHHHHHHHHHHhcCchhhhhhHHhHHHHHH
Confidence 999999999999999999997 89999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccccCCchhHHHHHHHHHHHHHHHhhhhhccCCCCCcchhhhhhcccccccccCCCccccccccchhhHHHHHHH
Q 009885 392 YSLFPLLYEGQEYPIKVLLLLLHSILMWLGFSTKFTRASAPNTMVTAKKKGAQSKSIESSSPAAEKGGFTIGWVGKSYLL 471 (523)
Q Consensus 392 ~SlfPLL~~~~e~~ikv~l~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Yl~ 471 (523)
+|++|||++.+|.++|..++.+|++.++..+++..+.+ ..++.|+.|+.
T Consensus 400 ~sL~plL~~~~~~~~k~~~~~~w~i~~~~~~~~~~~~~-------------------------------~~~~~~~~y~~ 448 (500)
T KOG2576|consen 400 YSLYPLLFTATEFPIKYLFTEIWCIPMFAAFRKTFPIS-------------------------------LLNRLELTYIL 448 (500)
T ss_pred HhhhHHHhcCcccchhhHHHHHHHHHHHHHHHHhccch-------------------------------hhhHHHHHHHh
Confidence 99999999999999999999999999999999877443 37899999999
Q ss_pred HHHHHHHHHHhccccccCCCCCChhHHHHHHhhhhhHHHHHH-HHHHhh
Q 009885 472 GLLLVEIWGQFLHPYLLGDKFPFVPLMLISTYCAFGIMYSWI-WQLRWI 519 (523)
Q Consensus 472 gl~~l~~~~~~~~p~~~~~rlpFLpLml~Svycaigv~~~w~-~~~~~~ 519 (523)
|+.++.+|+++.+++.+++|+||+|+|+||+||+.|+.+ |. ..|+|+
T Consensus 449 g~~p~~i~~~~~~~~~~~~k~~flpl~ltsvy~a~gI~~-~f~l~~ly~ 496 (500)
T KOG2576|consen 449 GLLPIVIYDEFKWRLSFLQKFEFLPLMLTSVYCALGIIY-WFALYWLYF 496 (500)
T ss_pred ccccHHHHhhhheeeeecccccchhHHHHHHHHHhhHHH-HHHHHHHHH
Confidence 999999999999999999999999999999999999999 76 889883
No 2
>PF03155 Alg6_Alg8: ALG6, ALG8 glycosyltransferase family; InterPro: IPR004856 N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues. This oligosaccharide is composed of Glc(3)Man(9)GlcNAc(2). The addition of the three glucose residues is the final series of steps in the synthesis of the oligosaccharide precursor. Alg6 transfers the first glucose residue, and Alg8 transfers the second one []. In the human alg6 gene, a C-T transition, which causes Ala333 to be replaced with Val, has been identified as the cause of a congenital disorder of glycosylation, designated as type Ic OMIM:603147 []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0005789 endoplasmic reticulum membrane
Probab=100.00 E-value=4.5e-145 Score=1157.58 Aligned_cols=445 Identities=45% Similarity=0.826 Sum_probs=407.8
Q ss_pred HHHHHHHH--hcCCccc------chhhhhhhHHHHhccCCCcccccccCCc---cCCCCCchhHHHHHHHhhhccc-cCC
Q 009885 16 IAVCVKLL--LIPAYHS------TDFEVHRHWLALTHSLPLSNWYADETSP---WTLDYPPFFACFERFLSIFAHY-IDP 83 (523)
Q Consensus 16 ~~~~lK~l--l~P~y~S------~DfE~~R~WmaiT~~LP~~~WY~~~ts~---WtLDYPPl~Ay~~~llg~ia~~-~dp 83 (523)
+++++|++ +.|.|+| |||||||||||||+|||++|||+|+||+ |||||||+||||||++||+|++ +||
T Consensus 2 ~~~~~r~~v~l~p~s~~~~ppm~gDfEaqRhWmeiT~~LP~~~WY~~~t~~l~yW~LDYPPl~Ay~~~~lg~~a~~~~~p 81 (469)
T PF03155_consen 2 IATLLRLLVSLGPYSGSGTPPMYGDFEAQRHWMEITHNLPISEWYFNDTSNLQYWGLDYPPLFAYFSWLLGKIAHFFIDP 81 (469)
T ss_pred ceeHHHHHHHcCCcccCCCCCCCCcHHHHHHHHHHHccCCHHHHHhcCCCccCcCcCCCCchHHHHHHHHHhhccccCCc
Confidence 57899999 9999999 9999999999999999999999999766 9999999999999999999999 899
Q ss_pred ceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHH-HHHHHhcc------chhhhHHHHHHHHHccceeeecccchhhhhH
Q 009885 84 QIVDLHNGLNYRANSAIYFLRISVILSDLWLLYG-VYRLTKNA------DVKRRYLIWVLIVWSPALVMVDHLHFQYNGF 156 (523)
Q Consensus 84 ~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~-~~~~~~~~------~~~~~~~~~~~~ll~P~llliDh~HFQYNg~ 156 (523)
+|+++.+||||||+++|+|||.|||++|++++++ ++.+++.. +++++.+..+++++|||+++||||||||||+
T Consensus 82 ~~~~l~~s~g~~s~~~~~f~R~tVi~~d~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~PgLilIDH~HFQYN~~ 161 (469)
T PF03155_consen 82 EWVALVSSRGYESPSHKLFMRLTVIVSDLLLYIPAVLFFCKSSGRSRNQSSKQRFIALLLILLNPGLILIDHGHFQYNGF 161 (469)
T ss_pred hhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHCchHHhhhhhhhhHHHH
Confidence 9999889999999999999999999999999887 66666643 3445677888999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcc-cchhhhhHHHHHHHHHHHHHHHhhhh
Q 009885 157 LLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKG-LVRGFSRLSVLGAVVVAVFAAAYGPF 235 (523)
Q Consensus 157 llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~~~~~~-~~~~~~~l~~lg~~Vi~tf~~~f~PF 235 (523)
|+|++++|++++.+||+++||++|+++||+|||++|+||+||+||||+|..++ ...+++|++++|++|++||+++|+||
T Consensus 162 ~lGl~l~si~~~~~~~~l~~a~~F~~~Ln~Kqm~LY~Ap~~f~yLL~~c~~~~~~~~~~~~~~~lg~~Vi~~f~~~~~PF 241 (469)
T PF03155_consen 162 LLGLLLLSIAALIRGRYLLGAILFSLLLNFKQMFLYYAPAFFVYLLGSCFQRKSFRFSIKRLIKLGIVVIATFALSFGPF 241 (469)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999954443 22378999999999999999999999
Q ss_pred cccccccchhhhhccCCcccccccccCchhHhHHHHHHHHHHHHhhcccccccCCccccCccccccCCcccCCCCChhHH
Q 009885 236 LYHGQIQQVFNRMFPFGRGLCHAYWAPNFWVFYIILDKVFSFFLKKFGFSIQIPAASFTGGLVGDSSPFAVLPKISPSTT 315 (523)
Q Consensus 236 i~~~ql~Qvl~RLFPF~RGL~haywA~NfWa~yn~~dKvl~~~~~~l~~~~~~~~~s~t~glv~~~~~~~vLP~i~p~~t 315 (523)
+..+|++|+++|||||+||||||||| ||||+||++||++.++. .|+++|++|
T Consensus 242 ~~~~~l~Qvl~RlFPF~RGL~hdy~A-NfW~~~~~~~K~~~~~~---------------------------~p~i~~~~~ 293 (469)
T PF03155_consen 242 LYSGQLQQVLSRLFPFKRGLFHDYWA-NFWCLYNFVDKVLNLFL---------------------------PPQITPLLT 293 (469)
T ss_pred HHhhhHHHHHHHhCccccchHHHHHH-HHHHHHHHHHHHHHhcC---------------------------CcchhhHHH
Confidence 98999999999999999999999998 99999999999987631 278999999
Q ss_pred HHHHHHHHhhHHHHHhcCCChhhHHHHHHHhhhhccccccccchhhHHHhhhhHHHHhhcCccchhHHHHHhhhhhhccc
Q 009885 316 LIMVLLALSPCFIKAWTNPQPRMVARWIAYAYTCGFLFGWHVHEKASLHFVIPLAIVAVQSLEDAKHYFMLSIVSCYSLF 395 (523)
Q Consensus 316 ~~lTl~~~lP~l~~l~~~P~~~~F~~~l~~~slsfFLFg~hVHEKaILl~~lP~~ll~~~~~~~~~~~~~ls~~~~~Slf 395 (523)
+++|+++++|+++++|++|++|+|++|+++||+|||||||||||||||++++|+++++.+++++++++.+++++|++|||
T Consensus 294 ~~~Tl~~~lP~~~~l~~~p~~~~f~~~l~~~sl~fFLFs~hVHEKaILl~llP~tLL~~~~~~~~~~~~~ls~v~~fSLf 373 (469)
T PF03155_consen 294 LILTLLAILPSLVKLWFRPSPRRFLLALVLCSLSFFLFSWHVHEKAILLPLLPLTLLAPEDPRDARWFFWLSNVGTFSLF 373 (469)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhCCCcceEEeHHHhhhHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHhhhhhccCCCCCcchhhhhhcccccccccCCCccccccccchhhHHHHHHHHHHH
Q 009885 396 PLLYEGQEYPIKVLLLLLHSILMWLGFSTKFTRASAPNTMVTAKKKGAQSKSIESSSPAAEKGGFTIGWVGKSYLLGLLL 475 (523)
Q Consensus 396 PLL~~~~e~~ikv~l~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Yl~gl~~ 475 (523)
|||+||+|.++|++++++|.++..... +..+.. .++ ....+++|+.|+.|+++
T Consensus 374 PLL~kd~l~l~~v~l~ll~~~l~~~~~-~~~~~~----------------------~~~----~~~~~~~~~lyl~gl~~ 426 (469)
T PF03155_consen 374 PLLFKDGLTLIYVVLTLLYNILIYCFS-SLKSSF----------------------RRR----SPLLNRLEKLYLIGLIA 426 (469)
T ss_pred cccccCcchHHHHHHHHHHHHHHHhhh-hccccc----------------------ccc----cchHHHHHHHHHHHHHH
Confidence 999999999999999999998863222 111010 001 23588999999999999
Q ss_pred HHHHHHhccccc-cCCCCCChhHHHHHHhhhhhHHHHHHHH
Q 009885 476 VEIWGQFLHPYL-LGDKFPFVPLMLISTYCAFGIMYSWIWQ 515 (523)
Q Consensus 476 l~~~~~~~~p~~-~~~rlpFLpLml~Svycaigv~~~w~~~ 515 (523)
++++.+++|+.+ .|+||||||+|++|+|||+|++++|+|.
T Consensus 427 l~i~~~il~~~~~pp~r~PfLplmL~Svyca~gf~~~~ly~ 467 (469)
T PF03155_consen 427 LMIYLHILHPLVPPPPRYPFLPLMLNSVYCAIGFFYFWLYF 467 (469)
T ss_pred HHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhe
Confidence 999999999988 7899999999999999999999999654
No 3
>KOG2575 consensus Glucosyltransferase - Alg6p [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=6.2e-117 Score=907.61 Aligned_cols=441 Identities=26% Similarity=0.462 Sum_probs=373.4
Q ss_pred HHHHHHHHHHHhc-CCc-------ccchhhhhhhHHHHhccCCCcccccc----cCCccCCCCCchhHHHHHHHhhhccc
Q 009885 13 FFAIAVCVKLLLI-PAY-------HSTDFEVHRHWLALTHSLPLSNWYAD----ETSPWTLDYPPFFACFERFLSIFAHY 80 (523)
Q Consensus 13 ~~~~~~~lK~ll~-P~y-------~S~DfE~~R~WmaiT~~LP~~~WY~~----~ts~WtLDYPPl~Ay~~~llg~ia~~ 80 (523)
+..++.++|...- ..| +.|||||||||||||.|||++|||.| |.+||||||||+||||+|++|.++++
T Consensus 36 i~~~~l~~r~~Isl~pYSG~~~PPmyGDyEAQRHWmEIT~nLPv~qWY~n~t~NDLqYWGLDYPPLTAYhSyl~G~i~~f 115 (510)
T KOG2575|consen 36 ILLVLLCVRSAISLNPYSGAGSPPMYGDYEAQRHWMEITVNLPVSQWYFNGTHNDLQYWGLDYPPLTAYHSYLLGIIGNF 115 (510)
T ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHHhhcCcHHHHhhcCCCCccceecCCCCcHHHHHHHHHHHHHhh
Confidence 3456688888766 112 56999999999999999999999998 66999999999999999999999999
Q ss_pred cCCceEEeccCCCCCCcchhHhHHHHHHHHHHHHHH-HHHHHHhcc----chhhhHHHHHHHHHccceeeecccchhhhh
Q 009885 81 IDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLY-GVYRLTKNA----DVKRRYLIWVLIVWSPALVMVDHLHFQYNG 155 (523)
Q Consensus 81 ~dp~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~-~~~~~~~~~----~~~~~~~~~~~~ll~P~llliDh~HFQYNg 155 (523)
+||+|+++++||||||.++|+|||.|||++|++++. ++..++++. ++.++.+.+++++++|++++||||||||||
T Consensus 116 ~NP~wvaL~tSRGfES~~hKlfMR~TViisd~liy~Pa~ify~~~~~r~~~~~~~~a~~~~iLl~P~L~LID~GHFQYNs 195 (510)
T KOG2575|consen 116 INPEWVALHTSRGFESIAHKLFMRSTVIISDLLIYLPALIFYFKWLHRTRSKKSKIAYAALILLYPSLLLIDHGHFQYNS 195 (510)
T ss_pred cChhHhhhhccCCcccHHHHHHHHHHHHHHhHHHHhhHHHHHHHHhhhccCcccHHHHHHHHHhCCceEEEecCcceech
Confidence 999999999999999999999999999999999865 555555554 334456667899999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHHHHHHhhhh
Q 009885 156 FLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYGPF 235 (523)
Q Consensus 156 ~llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~~~~~~~~~~~~~l~~lg~~Vi~tf~~~f~PF 235 (523)
+|+|+++++|+.+.++++++|+++|++++|+|||+||+||++|+|||++|..++...++.|++++|.+|++||+++|.||
T Consensus 196 isLGl~~~ai~~ll~~~~~~as~~F~LAlnyKQMeLY~A~pfF~fLLg~c~k~k~~~~f~ri~~ia~~Vv~TF~iiw~P~ 275 (510)
T KOG2575|consen 196 ISLGLTLYAIAALLKNFYVLASVLFVLALNYKQMELYHALPFFAFLLGSCLKPKLFNSFARIIKIALAVVGTFVIIWLPF 275 (510)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988776655578999999999999999999999
Q ss_pred cccc-cccchhhhhccCCcccccccccCchhHhHHHHHHHHHHHHhhcccccccCCccccCccccccCCcccCCCCChhH
Q 009885 236 LYHG-QIQQVFNRMFPFGRGLCHAYWAPNFWVFYIILDKVFSFFLKKFGFSIQIPAASFTGGLVGDSSPFAVLPKISPST 314 (523)
Q Consensus 236 i~~~-ql~Qvl~RLFPF~RGL~haywA~NfWa~yn~~dKvl~~~~~~l~~~~~~~~~s~t~glv~~~~~~~vLP~i~p~~ 314 (523)
+..+ +..|+++|+|||+||++|||+ |||||..|+..|.+....+ ++...+
T Consensus 276 ~~~~~~~~qvl~RlFPf~RGlfEDKV-ANfWCt~n~~~K~k~~ft~----------------------------q~~~~i 326 (510)
T KOG2575|consen 276 LLSGDTALQVLHRLFPFARGLFEDKV-ANFWCTFNVFLKIKELFTQ----------------------------QQLQVI 326 (510)
T ss_pred HhccchHHHHHHHhCchhcchhhhhh-hhhhhhhhhhhhhhhhhhH----------------------------HHHHHH
Confidence 9864 899999999999999999995 7999999999887654311 234578
Q ss_pred HHHHHHHHHhhHHHHHhcCCChhhHHHHHHHhhhhccccccccchhhHHHhhhhHHHHhhcCccchhHHHHHhhhhhhcc
Q 009885 315 TLIMVLLALSPCFIKAWTNPQPRMVARWIAYAYTCGFLFGWHVHEKASLHFVIPLAIVAVQSLEDAKHYFMLSIVSCYSL 394 (523)
Q Consensus 315 t~~lTl~~~lP~l~~l~~~P~~~~F~~~l~~~slsfFLFg~hVHEKaILl~~lP~~ll~~~~~~~~~~~~~ls~~~~~Sl 394 (523)
+++.|+++.+|+|+.++.+|+.|.|..++++||+||||||||||||+||+|.+|.+++..+-+....+ ..+++.|||
T Consensus 327 Sl~~Tli~~LPs~v~l~L~P~~~~f~~~L~~~slsFFLFSFQVHEKtILl~~LPa~lLls~~~~~~~~---~~nva~FSm 403 (510)
T KOG2575|consen 327 SLAATLIGSLPSMVVLFLRPTNKGFLYGLTATSLSFFLFSFQVHEKTILLPALPALLLLSEYPSLVIW---FLNVALFSM 403 (510)
T ss_pred HHHHHHHHHhHHHHHHhhcccccchhhhhHhhhhhhhheeeeechhhhHHHHHHHHHHHHhchHHHHH---HHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999877765544 448999999
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHhhhhhccCCCCCcchhhhhhcccccccccCCCccccccccchhhHHHHHHHHHH
Q 009885 395 FPLLYEGQEYPIKVLLLLLHSILMWLGFSTKFTRASAPNTMVTAKKKGAQSKSIESSSPAAEKGGFTIGWVGKSYLLGLL 474 (523)
Q Consensus 395 fPLL~~~~e~~ikv~l~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Yl~gl~ 474 (523)
||||.||+..++++++++++.++ +.+....+.+.. + ++ +- +++..+++|.+
T Consensus 404 ~PLL~kD~L~l~y~vl~~~f~~i--g~f~~~~k~~~~------------~---------~~--~~----pi~~~f~i~~i 454 (510)
T KOG2575|consen 404 FPLLKKDGLLLPYVVLSFLFNWI--GNFVVFYKTSLP------------R---------FK--NY----PIKYSFIIGTI 454 (510)
T ss_pred HHHHhhcccccHHHHHHHHHHHh--cceEEEecccch------------h---------hc--cC----chhhhhHHHHH
Confidence 99999999999999999999872 222211111110 0 10 00 12334444433
Q ss_pred HHH---HHHHhccccccCCCCCChhHHHHHHhhhhhHHHHHHHHHH
Q 009885 475 LVE---IWGQFLHPYLLGDKFPFVPLMLISTYCAFGIMYSWIWQLR 517 (523)
Q Consensus 475 ~l~---~~~~~~~p~~~~~rlpFLpLml~Svycaigv~~~w~~~~~ 517 (523)
... +....++| |+|||||+..++++.||+|++++|+|...
T Consensus 455 ~~i~v~vl~l~i~p---PqkyPdL~~ll~~~~s~~~F~~F~ly~n~ 497 (510)
T KOG2575|consen 455 IMISVVVLDLTIPP---PQKYPDLWVLLNCFLSCVHFIYFLLYTNY 497 (510)
T ss_pred HHHHHHhheeecCC---cccCccHHHHHHHHHHHHHHHHHHHHHhh
Confidence 322 33344456 79999999999999999999999997654
No 4
>TIGR03459 crt_membr carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).
Probab=98.69 E-value=4e-07 Score=98.61 Aligned_cols=168 Identities=17% Similarity=0.210 Sum_probs=126.3
Q ss_pred HHHhcCCcccchhh---hhhhHHHHhcc----CCC--cccccccC-Ccc---CCCCCchhHHHHHHHhhhccccCCceEE
Q 009885 21 KLLLIPAYHSTDFE---VHRHWLALTHS----LPL--SNWYADET-SPW---TLDYPPFFACFERFLSIFAHYIDPQIVD 87 (523)
Q Consensus 21 K~ll~P~y~S~DfE---~~R~WmaiT~~----LP~--~~WY~~~t-s~W---tLDYPPl~Ay~~~llg~ia~~~dp~~v~ 87 (523)
=+++-|.-.|.|+. +|-.=++-..| -|. .++..++. ..| +..|||++.+.+-..+.+. .+-+.
T Consensus 88 Pll~a~PlfSrDvYsYlaqG~l~~~G~dPY~~gP~~~~~~~~~~v~~~W~~t~aPYGPl~l~i~~~v~~l~----g~~i~ 163 (470)
T TIGR03459 88 PLLFAVPMMSRDVYSYLMQGALLRDGFDPYTVGAAANPGPLLDEVSPDWRNTTTPYGPLHLLVGQAITTVT----GDNVT 163 (470)
T ss_pred HHHhcCCcccHHHHHHHHHHHHHHcCCCccccCCccCCchHhhhcCchhccCCCCCChHHHHHHHHHHHHh----CCCcH
Confidence 34555555899985 55544322111 011 12233333 343 4689999999988877765 23222
Q ss_pred eccCCCCCCcchhHhHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHccceee--ecccchhhhhHHHHHHHHHH
Q 009885 88 LHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADVKRRYLIWVLIVWSPALVM--VDHLHFQYNGFLLGWLLLSI 165 (523)
Q Consensus 88 l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~~~~~~~~~~~~~~~~ll~P~lll--iDh~HFQYNg~llGlll~si 165 (523)
..++.+|+..+++|+++.+++.++.|+.+.+.+. +.-+..+||-+|+ +.++|+ |++|.|+++.++
T Consensus 164 ----------~~v~~~Rl~~l~g~~l~~w~~~rLar~~g~~~~~-AlWL~~~NPLviihlvgg~Hn--ealM~gl~l~gl 230 (470)
T TIGR03459 164 ----------AGTLAFKLLSLPGLAVMVWAVPKLATHLGGNPTV-ALWLGVLNPLVVIHLIGGMHN--EMLMVGLVSAGI 230 (470)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHcCchhhhhhhcchhH--HHHHHHHHHHHH
Confidence 2678999999999999999999999887655443 2344678999998 999999 999999999999
Q ss_pred HHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Q 009885 166 SFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHY 205 (523)
Q Consensus 166 ~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~~ 205 (523)
+...++|.+.|+++.+++.+.|...+...|.++-+..++.
T Consensus 231 ~~~~r~~~~~g~vli~~a~~VK~~a~l~Lpf~~~~~~~~~ 270 (470)
T TIGR03459 231 LLALKRRPVAGIALIAVAVALKATAGIALPFVVWIWVAHV 270 (470)
T ss_pred HHHHhcccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999998776665554
No 5
>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes. It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=98.44 E-value=2.6e-05 Score=75.20 Aligned_cols=155 Identities=23% Similarity=0.342 Sum_probs=93.4
Q ss_pred CCCchhHHHHHHHhhhccccCCceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHHHHHHHhccchh----hhHHHHHHH
Q 009885 62 DYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADVK----RRYLIWVLI 137 (523)
Q Consensus 62 DYPPl~Ay~~~llg~ia~~~dp~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~~~~~~~----~~~~~~~~~ 137 (523)
-|||.+++.....+... ++. ....-+ +++...+....+...+..+++ .........
T Consensus 2 ~YpP~~~~l~~p~~~l~----~~~-------------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 61 (241)
T PF09594_consen 2 VYPPLFALLFAPLALLP----FPV-------------AFLLWA---LLSLAALALAVRLLLRRLGRRKPPGRALLLALLL 61 (241)
T ss_pred cCcHHHHHHHHHHHHcC----HHH-------------HHHHHH---HHHHHHHHHHHHHHHHHhCcCcchhHHHHHHHHH
Confidence 39999999999887544 110 111222 233333333344444443221 122222334
Q ss_pred HHccceeeecccchhhhhHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhH
Q 009885 138 VWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRL 217 (523)
Q Consensus 138 ll~P~llliDh~HFQYNg~llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~~~~~~~~~~~~~l 217 (523)
+..+.+ ..+..-.|.|.+...+++.++...+++|+..+|++++++...|+..+...|.+.. + |++|+.
T Consensus 62 ~~~~p~-~~~~~~gq~~~l~~~l~~~a~~~~~r~r~~~agv~lgla~~~K~~p~~~l~~ll~----~-------r~~r~~ 129 (241)
T PF09594_consen 62 LAFPPV-LSALGLGQFDLLVAALLLLALLALRRGRPWLAGVLLGLAAAIKLYPALLLPALLI----R-------RRWRAA 129 (241)
T ss_pred HHHHHH-HHHHHhccHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHh----c-------chHHHH
Confidence 444444 6667777889999999999999999999999999999999999999888883332 1 245665
Q ss_pred HHHHHHHHHHHHHHhhhhccc--ccccchhhhhccC
Q 009885 218 SVLGAVVVAVFAAAYGPFLYH--GQIQQVFNRMFPF 251 (523)
Q Consensus 218 ~~lg~~Vi~tf~~~f~PFi~~--~ql~Qvl~RLFPF 251 (523)
.....+..+.+++ |+... +......+-++..
T Consensus 130 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~ 162 (241)
T PF09594_consen 130 LWAAATAAVLFAL---PFLLFGPDSWQDFLSVLFQN 162 (241)
T ss_pred HHHHHHHHHHHHH---HHHHcCchHHHHHHHHHHHH
Confidence 5554444443333 54432 3344444433333
No 6
>COG5542 Predicted integral membrane protein [Function unknown]
Probab=97.80 E-value=0.00012 Score=78.13 Aligned_cols=154 Identities=18% Similarity=0.287 Sum_probs=121.8
Q ss_pred CCCCchhHHHHHHHhhhccccCCceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHHHHHHHhcc-ch-hhhHHHHHHHH
Q 009885 61 LDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNA-DV-KRRYLIWVLIV 138 (523)
Q Consensus 61 LDYPPl~Ay~~~llg~ia~~~dp~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~~~~-~~-~~~~~~~~~~l 138 (523)
.||+|+.-|..-+.++++.-. | -.+--.+.-+++|.+..|.+|+..|+. +. +....+..++.
T Consensus 93 ~~~~p~~~y~i~ii~~L~~~~------------~----~~l~~~l~s~~~~~~~ay~lY~~tk~~y~~~~~a~fa~i~~~ 156 (420)
T COG5542 93 ADYFPLYLYWIRIINKLLSSL------------Y----FILAIKLFSNIADFVAAYFLYKITKLRYGLGSMARFATILVI 156 (420)
T ss_pred cccCchHHHHHHHHHHHHhhh------------H----HHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhhheEEEEE
Confidence 799999999999999998331 1 122334566789999999999988764 22 33344566777
Q ss_pred HccceeeecccchhhhhHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhHH
Q 009885 139 WSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLS 218 (523)
Q Consensus 139 l~P~llliDh~HFQYNg~llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~~~~~~~~~~~~~l~ 218 (523)
++|..+...-++.|=+|+-.-+.+++++++.+++...|+++|+++..+|-..+..+|.+.+.+.+.- +++...
T Consensus 157 ~~P~~i~~s~iw~~teSlf~ll~~l~iyf~~~k~~~~a~~~faLa~l~Rsngi~~~p~fl~~~ik~~-------~ik~i~ 229 (420)
T COG5542 157 LSPSVIYNSAIWGQTESLFTLLSILAIYFFSIKKQIPALFFFALATLFRSNGIFLSPLFLIPLIKNR-------KIKIIW 229 (420)
T ss_pred eccHHHhhhhHHhccchHHHHHHHHHHHHHHccchhHHHHHHHHHHHhccchhHHHHHHHHHHHhhh-------hHHHhh
Confidence 8899999999999999999999999999999999999999999999999999999999999887665 345555
Q ss_pred HHHHHHHHHHHHHhhhhcc
Q 009885 219 VLGAVVVAVFAAAYGPFLY 237 (523)
Q Consensus 219 ~lg~~Vi~tf~~~f~PFi~ 237 (523)
.....+-.++.....|...
T Consensus 230 ~~l~~~~l~~~~ll~~~~~ 248 (420)
T COG5542 230 YLLPSGSLTYLSLLMPAWI 248 (420)
T ss_pred hhhhhHHHHHHHHHHHHHH
Confidence 5555555555566666643
No 7
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase
Probab=97.69 E-value=0.0014 Score=58.93 Aligned_cols=124 Identities=21% Similarity=0.361 Sum_probs=96.2
Q ss_pred CCCchhHHHHHHHhhhccccCCceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHHHHHHHhcc-chhhhHHHHHHHHHc
Q 009885 62 DYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNA-DVKRRYLIWVLIVWS 140 (523)
Q Consensus 62 DYPPl~Ay~~~llg~ia~~~dp~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~~~~-~~~~~~~~~~~~ll~ 140 (523)
|=||+..|......++-. + +..-.|...++.-.+.....++..|+. +++.+....++..+.
T Consensus 1 ~~pPl~~~~~~~~~~l~G-----------------~-~~~~~~~~~~l~~~~~~~~~y~i~r~~~~~~~a~~~~l~~~~~ 62 (159)
T PF13231_consen 1 DHPPLYFLLLALFFKLFG-----------------D-SVWALRLFNILFSLLTLLLIYLIARRLFGRRAALIAALLLALS 62 (159)
T ss_pred CCChHHHHHHHHHHHHhC-----------------c-CHHHHHHHHHHHHHHHHHHHHHHHHHHCCchHHHHHHHHHHHh
Confidence 569999999888777641 1 345678888888888888899988876 445566667778888
Q ss_pred cceeeecccchhhhhHHHHHHHHHHHHHHc----CC---chhHHHHHHHHhhhhhhHHHHHHHHHHHHHHH
Q 009885 141 PALVMVDHLHFQYNGFLLGWLLLSISFLQE----GK---DLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRH 204 (523)
Q Consensus 141 P~llliDh~HFQYNg~llGlll~si~~~~~----~~---~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~ 204 (523)
|..+.-.. ..+-|..+..+.+++++...+ ++ .++++++++++...|+..+.+.|+.++|++.+
T Consensus 63 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~k~~~~~~~~~~~~~l~~~ 132 (159)
T PF13231_consen 63 PMFIFYSA-SARPDMLLLFFFLLALYAFYRYIKSKKWRWWILAGLLLGLAFLTKYTFLLLIPALLLYLLLS 132 (159)
T ss_pred HHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 97766555 667788888888888876542 32 35799999999999999999999999888766
No 8
>COG5650 Predicted integral membrane protein [Function unknown]
Probab=97.57 E-value=9e-05 Score=81.18 Aligned_cols=187 Identities=16% Similarity=0.204 Sum_probs=120.1
Q ss_pred hhhhhhhHHHHhccCCCcccccccCC---ccCCCCCchhHHHHHHHhhhccccCCceEEeccCCCCCCcchhHhHHHHHH
Q 009885 32 DFEVHRHWLALTHSLPLSNWYADETS---PWTLDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVI 108 (523)
Q Consensus 32 DfE~~R~WmaiT~~LP~~~WY~~~ts---~WtLDYPPl~Ay~~~llg~ia~~~dp~~v~l~~s~gy~s~~~~~FmR~tVI 108 (523)
|||.--+|+|+-.+ .+|+.-++| .. ..||++.-=..+. |.+....-|.-.++ -... +.. ..-+=.+|.
T Consensus 104 ~~p~~asw~~vh~~---~P~~r~~ms~af~y-~~yPv~~~~y~~~-~~v~~~~Y~~L~~l-l~lP-~~~--ef~~~f~V~ 174 (536)
T COG5650 104 TFPYYASWLEVHGF---DPYVRYNMSKAFRY-MHYPVLGTPYQTG-GYVIYFSYPGLSAL-LFLP-VLF--EFNPFFKVL 174 (536)
T ss_pred cchhhhhheeecCC---Cccchhhhhhhhee-EeeccccCccccc-ceEEEEEecchhhh-ccCc-ccc--ccchhhhHH
Confidence 89999999987555 567666654 22 5899987211111 11222222332222 1111 111 112233444
Q ss_pred HHHHHHHH-HHHHHHhccchhhhHHHHHHHHHccceeeecccchhhhhHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhh
Q 009885 109 LSDLWLLY-GVYRLTKNADVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFK 187 (523)
Q Consensus 109 ~sDl~~~~-~~~~~~~~~~~~~~~~~~~~~ll~P~llliDh~HFQYNg~llGlll~si~~~~~~~~l~~a~~F~~~L~~K 187 (523)
+--+.++. .+.++.|+--...+.+..+++..+|-+...|- -|.+.+-.+++..+..+ ++|...||++++++..+|
T Consensus 175 AF~~A~~~l~~i~~~r~gl~~~~~~~valv~as~~v~f~v~--~~~DtI~~ffla~a~v~--r~rP~lAGvl~Gls~a~K 250 (536)
T COG5650 175 AFLLALIWLLVIYFIRKGLAGSRVLDVALVAASPLVGFAVF--TVFDTIWAFFLAAALVC--RGRPKLAGVLIGLSSAFK 250 (536)
T ss_pred HHHHHHHHHHHHHHHHhcccccceeeeeeeeccceEEEEEe--cchhHHHHHHHHHHHHh--cCCchHHHHHHHHHHHhh
Confidence 43333322 22333332222234455667778882223444 45588888888888777 999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHHHHHHhhhhccc
Q 009885 188 HLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYGPFLYH 238 (523)
Q Consensus 188 hm~LY~AP~~f~yLL~~~~~~~~~~~~~~l~~lg~~Vi~tf~~~f~PFi~~ 238 (523)
|..+++.|++..++-+.| +.+...+...+.++|+++..+||+..
T Consensus 251 ~~P~Ivl~pll~~~~key-------g~~~a~~f~~~aa~t~lLvN~PfiI~ 294 (536)
T COG5650 251 QIPLIVLPPLLYLIYKEY-------GLRPAIKFIATAAITWLLVNLPFIIL 294 (536)
T ss_pred cCchhhHHHHHHHHHHhc-------CcchHHHHHHHHHHHHHHHcCceEEe
Confidence 999999999999998887 67888899999999999999999964
No 9
>PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate. Whereas early mannosylation steps occur on the cytoplasmic side of the endoplasmic reticulum with GDP-Man as donor, the final reactions from Man5GlcNAc2-PP-Dol to Man9GlcNAc2-PP-Dol on the lumenal side use Dol-P-Man []. The ALG3 gene encodes the Dol-P-Man:Man5GlcNAc2-PP-Dol mannosyltransferase.; GO: 0016758 transferase activity, transferring hexosyl groups, 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=97.22 E-value=0.00095 Score=70.86 Aligned_cols=102 Identities=25% Similarity=0.376 Sum_probs=88.2
Q ss_pred hhHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHHHHHHhh
Q 009885 154 NGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYG 233 (523)
Q Consensus 154 Ng~llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~~~~~~~~~~~~~l~~lg~~Vi~tf~~~f~ 233 (523)
+|+..-++..|+.+..++|..+|+++|++++..|-=.|.++|++.+.++... ++.+.+....+...+-.+.=.
T Consensus 130 D~~a~~~~~~ai~~~~~~~w~~g~~~yS~avSIKMN~LL~~Pall~~~l~~~-------g~~~~~~~l~v~~~vQvllg~ 202 (368)
T PF05208_consen 130 DCFAMLFLYAAILLFQRRRWLLGSLLYSLAVSIKMNALLFAPALLVLLLQSL-------GLLKTLWYLAVCALVQVLLGL 202 (368)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHcC-------CHHHHHHHHHHHHHHHHHHhh
Confidence 7888888899999999999999999999999999999999999988887765 677888877888888888889
Q ss_pred hhcccccccchhhhhccCCcccccccccCch
Q 009885 234 PFLYHGQIQQVFNRMFPFGRGLCHAYWAPNF 264 (523)
Q Consensus 234 PFi~~~ql~Qvl~RLFPF~RGL~haywA~Nf 264 (523)
||+. ..-..-++|=|=|+|-..+. |--|+
T Consensus 203 PFL~-~~p~~Yl~~AFdf~R~Fl~k-WTVNw 231 (368)
T PF05208_consen 203 PFLL-TNPWSYLSRAFDFSRQFLYK-WTVNW 231 (368)
T ss_pred HHHH-hCHHHHHHHhcccCceEEEE-EEEee
Confidence 9996 34457899999999988774 66665
No 10
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]
Probab=97.07 E-value=0.032 Score=61.44 Aligned_cols=180 Identities=18% Similarity=0.184 Sum_probs=124.2
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHhcCCcccch------hhhhhhHHHHhccCCCcccccccCCccCCCCCchhHHHHHHH
Q 009885 1 MESSSSTRQLLWFFAIAVCVKLLLIPAYHSTD------FEVHRHWLALTHSLPLSNWYADETSPWTLDYPPFFACFERFL 74 (523)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~lK~ll~P~y~S~D------fE~~R~WmaiT~~LP~~~WY~~~ts~WtLDYPPl~Ay~~~ll 74 (523)
|+...++.....+...+..+.+..+..+-..| .|+.|+..|--.+ +..++. +..|+ |.||+..|...+.
T Consensus 1 ~~~~~~~~~~~llll~~~~~~l~~l~~~~~~~~de~~~~~~~~~m~~s~~w--~~~~~~-g~~~~--~kPPl~~Wl~a~~ 75 (535)
T COG1807 1 MKALRSRLLLWLLLLIALALLLPGLGSRPLWDPDEARYAEIAREMLESGDW--FTPQLL-GLPYF--EKPPLVYWLQALS 75 (535)
T ss_pred CchhHHHHHHHHHHHHHHHHHhCccccCCCCCCCchhHHHHHHHHHHcCCC--cceeeC-Ccccc--CCCcHHHHHHHHH
Confidence 44555566666666666777666565554455 7999998876655 443443 44555 9999999988865
Q ss_pred hhhccccCCceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHHHHHHHhccch-hhhHHHHHHHHHccceeeecccchhh
Q 009885 75 SIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADV-KRRYLIWVLIVWSPALVMVDHLHFQY 153 (523)
Q Consensus 75 g~ia~~~dp~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~~~~~~-~~~~~~~~~~ll~P~llliDh~HFQY 153 (523)
-++. | .+-.=+|+...++=.+....+|.+.|+..+ +...++.+.+++.|..+...+.+- =
T Consensus 76 ~~lf--------------G----~~~~~~rl~~~l~~~~~~~l~y~l~k~l~~~~~a~~aali~~~~p~~~~~~~~~~-~ 136 (535)
T COG1807 76 YLLF--------------G----VNEWSARLPSALAGALTALLVYWLAKRLFGRLAALLAALILLLTPLFFLIGRLAL-L 136 (535)
T ss_pred HHHc--------------C----cchHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhHHHh-h
Confidence 5554 1 133468888888888777788888887643 356667888888999888666553 4
Q ss_pred hhHHHHHHHHHHHHHHcCC--------chhHHHHHHHHhhhhhhHHHHHHHHHHHHHHH
Q 009885 154 NGFLLGWLLLSISFLQEGK--------DLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRH 204 (523)
Q Consensus 154 Ng~llGlll~si~~~~~~~--------~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~ 204 (523)
|..+..++.+|+++..+.+ .+..++..+++.+.|-...++.|+.+..++..
T Consensus 137 D~~l~~f~~la~~~~~~~~~~~~~~~~~l~~gl~lGL~~ltKg~~~~~l~~~~~~~l~~ 195 (535)
T COG1807 137 DAALAFFLTLALALLYLALRARGKLKWLLLLGLALGLGFLTKGPGALLLPLILLLLLLA 195 (535)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 6677777777777544321 25678899999999999999999544444433
No 11
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional
Probab=96.32 E-value=2.7 Score=47.55 Aligned_cols=155 Identities=15% Similarity=0.158 Sum_probs=92.8
Q ss_pred cCCccCCCCCchhHHHHHHHhhhccccCCceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHHHHHHHhcc--chhhhHH
Q 009885 55 ETSPWTLDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNA--DVKRRYL 132 (523)
Q Consensus 55 ~ts~WtLDYPPl~Ay~~~llg~ia~~~dp~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~~~~--~~~~~~~ 132 (523)
+..|+ |-||+.-|.-.+.-++-. + +..=.|+...++=++....++.+.++. +++....
T Consensus 56 g~~y~--eKPPL~yWl~Als~~LFG--~----------------~~~a~RLpsaL~~~lt~llvy~larrl~~~r~~All 115 (552)
T PRK13279 56 GLRYF--EKPIAGYWINSIGQWLFG--D----------------NNFGVRFGSVFSTLLSALLVYWLALRLWRDRRTALL 115 (552)
T ss_pred CCcCC--CCCcHHHHHHHHHHHHcC--C----------------CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHH
Confidence 33444 999999987776554431 1 124589988888887777788888775 3344555
Q ss_pred HHHHHHHccceeeecccchhhhhHHHHHHHHHH---HHHHc----CC----chhHHHHHHHHhhhhhhHHHHHHHH--HH
Q 009885 133 IWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSI---SFLQE----GK----DLMGGFLFAVLLCFKHLFAVAAPVY--FV 199 (523)
Q Consensus 133 ~~~~~ll~P~llliDh~HFQYNg~llGlll~si---~~~~~----~~----~l~~a~~F~~~L~~Khm~LY~AP~~--f~ 199 (523)
+.++++.+|++....|.+ .-+..+..+..+|+ +...+ ++ .+..++..++++.-|-......|.. +.
T Consensus 116 AaLIlls~~~v~~~g~~a-~~D~~l~~fi~lal~~f~~~~~~~~~~~~~~~~lllGla~Glg~LTKG~ial~lP~l~il~ 194 (552)
T PRK13279 116 AALIYLSLFLVYGIGTYA-VLDPMITLWLTAAMCSFWLALQAQTRRGKIGGYLLLGLACGMGFMTKGFLALAVPVISVLP 194 (552)
T ss_pred HHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 666667778776655544 23455444544443 33322 11 2445677788899998666666633 33
Q ss_pred HHHHHHhhcccchhhhhHHHHHHHHHHHHHHHhhhhcc
Q 009885 200 YLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYGPFLY 237 (523)
Q Consensus 200 yLL~~~~~~~~~~~~~~l~~lg~~Vi~tf~~~f~PFi~ 237 (523)
+++.+. ++++....+...+.++++..+|+..
T Consensus 195 ~ll~~r-------r~~~ll~~~~l~llvalli~lPW~l 225 (552)
T PRK13279 195 WVIWQK-------RWKELLIYGPLAVLSAVLVSLPWAL 225 (552)
T ss_pred HHHHhh-------hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443322 4555555554555566667788753
No 12
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=96.09 E-value=1.1 Score=51.24 Aligned_cols=153 Identities=22% Similarity=0.239 Sum_probs=90.5
Q ss_pred CCchhHHHHHHHhhhccccCCceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHHHHHHHhccch-hhhHHHHHHHHHcc
Q 009885 63 YPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADV-KRRYLIWVLIVWSP 141 (523)
Q Consensus 63 YPPl~Ay~~~llg~ia~~~dp~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~~~~~~-~~~~~~~~~~ll~P 141 (523)
||||+.|.-.+++.+.. |+ ..-..++++++=++...+.|.+.|+..+ ..+.+..+++++.|
T Consensus 4 YpPL~yyl~a~l~~l~g--~~----------------~~Ay~l~~~L~~~l~~~~~Y~~~R~~~~~~~A~l~aiLyl~~p 65 (616)
T PF10131_consen 4 YPPLPYYLGALLSLLFG--NP----------------IVAYKLFIFLAFFLGGLGMYFLGRRLGRRKAAILAAILYLFSP 65 (616)
T ss_pred CCcHHHHHHHHHHHHhC--CH----------------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhH
Confidence 99999999999988761 11 1233455666655556677888877655 34566788899999
Q ss_pred ceeeecccchhhhhH----HHHHHHHHHHHHHcCCc----hhHHHHHHHHhhhhh--hHHHHHHHHHHHHHHHHhhcccc
Q 009885 142 ALVMVDHLHFQYNGF----LLGWLLLSISFLQEGKD----LMGGFLFAVLLCFKH--LFAVAAPVYFVYLLRHYCWKGLV 211 (523)
Q Consensus 142 ~llliDh~HFQYNg~----llGlll~si~~~~~~~~----l~~a~~F~~~L~~Kh--m~LY~AP~~f~yLL~~~~~~~~~ 211 (523)
..+...+.+..+=.. ++=+++++...+.+++. +..|+.+++. .+=| ..+....+.+.+++-....++
T Consensus 66 y~l~~~y~rgni~e~lA~~llPlvll~~~~~~~~~~~r~~~~lAl~~all-~lsHll~~ll~~l~~~~~lLi~~~~~~-- 142 (616)
T PF10131_consen 66 YHLRNIYWRGNIPETLAFALLPLVLLFLYRFIKKRKYRYWILLALSMALL-ALSHLLSTLLTGLALIVFLLIYLIQRK-- 142 (616)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHhhH--
Confidence 999888888765544 23334455555554333 4456655544 3336 667777777777763322211
Q ss_pred hhhhhHHHHHHHHHHHH--HHHhhhhc
Q 009885 212 RGFSRLSVLGAVVVAVF--AAAYGPFL 236 (523)
Q Consensus 212 ~~~~~l~~lg~~Vi~tf--~~~f~PFi 236 (523)
+....+.++..++++.. +.-+.|++
T Consensus 143 ~~~~~l~~~~a~~lgl~lsafwL~P~l 169 (616)
T PF10131_consen 143 RFKRNLIKLVAIVLGLLLSAFWLLPAL 169 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12233333333333332 34456886
No 13
>KOG2762 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=95.89 E-value=0.016 Score=61.33 Aligned_cols=102 Identities=23% Similarity=0.324 Sum_probs=78.0
Q ss_pred hhHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHHHHHHhh
Q 009885 154 NGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYG 233 (523)
Q Consensus 154 Ng~llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~~~~~~~~~~~~~l~~lg~~Vi~tf~~~f~ 233 (523)
+|+-.-++-.++.....+|.+.|+++|++|+..|-=.|-+||++++.+|..-- ..+.+..+++.. ++-.+.=+
T Consensus 158 D~fa~lll~~~i~~~l~qkw~~gs~~fSlAvSVKMNvLLyaPall~~lL~~~~------~~~tl~~L~v~~-~vQilvg~ 230 (429)
T KOG2762|consen 158 DPFAMLLLYVAILLFLKQKWLVGSIFFSLAVSVKMNVLLYAPALLLLLLQNLG------PIGTLLHLAVCI-LVQILVGL 230 (429)
T ss_pred chHHHHHHHHHHHHHHHHHHHhHhhhheeehhhhhhhHHHHHHHHHHHHHhcc------HHHHHHHHHHHH-HHHHHHcC
Confidence 67778888889999999999999999999999999999999999999887751 223444444333 33344557
Q ss_pred hhcccccccchhhhhccCCcccccccccCch
Q 009885 234 PFLYHGQIQQVFNRMFPFGRGLCHAYWAPNF 264 (523)
Q Consensus 234 PFi~~~ql~Qvl~RLFPF~RGL~haywA~Nf 264 (523)
||+. ..-.|-+++=|-++|- |+-+|-.|+
T Consensus 231 PFLl-~~p~~Yl~~aFDlGR~-F~~kWtVNw 259 (429)
T KOG2762|consen 231 PFLL-YFPSSYLTQAFDLGRV-FMYKWTVNW 259 (429)
T ss_pred chHh-hChHHHHhhhcccccc-eeEEeeeee
Confidence 9985 4456689999999995 455777774
No 14
>PLN02841 GPI mannosyltransferase
Probab=95.17 E-value=0.3 Score=53.46 Aligned_cols=163 Identities=13% Similarity=0.163 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHhcCCcccchhhhhhhHHHHhccCCCccccc---------ccCC---ccCCCCCchhHHHHHHHhhhc
Q 009885 11 LWFFAIAVCVKLLLIPAYHSTDFEVHRHWLALTHSLPLSNWYA---------DETS---PWTLDYPPFFACFERFLSIFA 78 (523)
Q Consensus 11 ~~~~~~~~~lK~ll~P~y~S~DfE~~R~WmaiT~~LP~~~WY~---------~~ts---~WtLDYPPl~Ay~~~llg~ia 78 (523)
...++++.++|+.++- | || -|++-+|+ +-|..+|.. ++.| ==|--|+|+-||.-
T Consensus 9 ~~vll~a~~lRl~L~~-y--g~--~~D~~~eV--sytdidY~vftDga~lv~~G~SPY~r~TYrytPLLa~Ll------- 74 (440)
T PLN02841 9 RSLLLASALLRVALIV-Y--GE--WQDAHMEV--RYTDVDYLVFSDAAALVASGKSPFARDTYRYSPLLALLL------- 74 (440)
T ss_pred HHHHHHHHHHHHHHHH-H--HH--HhccCccc--cccccchHHHHHHHHHHHcCCCCCCCCCCCcChHHHHHH-------
Confidence 4566778889999883 2 11 12222332 234444432 1111 12467999999976
Q ss_pred cccCCceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHHHHHHHhccc--hhhhHHHHHHHHHccceeeecccchhhhhH
Q 009885 79 HYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNAD--VKRRYLIWVLIVWSPALVMVDHLHFQYNGF 156 (523)
Q Consensus 79 ~~~dp~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~~~~~--~~~~~~~~~~~ll~P~llliDh~HFQYNg~ 156 (523)
-|+.. + +..|-+.-=+++|++..+.+++..++.+ .+.....++++++||-.+.+.-.. -=+++
T Consensus 75 ---lPn~~-~----------~~~fgk~LF~l~Dll~a~ll~~il~~~~~~~~~~~~~a~~wL~NPlti~istrG-Sse~i 139 (440)
T PLN02841 75 ---VPNSL-L----------HRSWGKFLFSAADLLVGLFIHTILRLRGVPEKVCTWSVMVWLFNPFTFTIGTRG-NCEPI 139 (440)
T ss_pred ---cchhh-h----------hhhHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHhCcHHHHHhccc-chHHH
Confidence 13211 0 1234555557999999888887765432 222344577899999988865543 12566
Q ss_pred HHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 009885 157 LLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLL 202 (523)
Q Consensus 157 llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL 202 (523)
.--+.+++++++.+||...||++++++..+|-=.+.++|++..++-
T Consensus 140 ~~~lvl~~L~~l~~g~~~~Aa~~lglavhfkiYPiIy~~Pi~l~l~ 185 (440)
T PLN02841 140 VCAVILWILICLMNGRLLQAAFWYGLVVHFRIYPIIYALPIILVLD 185 (440)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHhc
Confidence 6677889999999999999999999999999999999999998883
No 15
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=95.15 E-value=0.22 Score=49.28 Aligned_cols=96 Identities=18% Similarity=0.175 Sum_probs=69.6
Q ss_pred chhHhHHHHHHHHHHHHHHHHHHHHhccc--hhhhHHHHHHHHHccceeeecccchhhhhHHHHHHHHHHHHHHcC----
Q 009885 98 SAIYFLRISVILSDLWLLYGVYRLTKNAD--VKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEG---- 171 (523)
Q Consensus 98 ~~~~FmR~tVI~sDl~~~~~~~~~~~~~~--~~~~~~~~~~~ll~P~llliDh~HFQYNg~llGlll~si~~~~~~---- 171 (523)
....-+|....+.-.+....++...++.. ++...+++++++++|.++...+. --=|+.+..+.++|+++..+.
T Consensus 80 ~~~~~~R~~~~l~~~~~~~l~y~~~~~~~~s~~~al~aa~l~~~~~~~~~~sr~-~~~D~~l~~f~~la~~~~~~~~~~~ 158 (245)
T PF02366_consen 80 VNYWAARLPSALFGALTVPLVYLILRRLFGSRRAALLAALLLALDPSLIVQSRY-ALLDSILLFFILLAIYCLLRWYRYQ 158 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHhhHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 35678999999998888888888777653 33455667778888877664332 223677777777777765544
Q ss_pred --------CchhHHHHHHHHhhhhhhHHHHH
Q 009885 172 --------KDLMGGFLFAVLLCFKHLFAVAA 194 (523)
Q Consensus 172 --------~~l~~a~~F~~~L~~Khm~LY~A 194 (523)
+.+++++..++++..|....+..
T Consensus 159 ~~~~~~~~~~~l~gi~lGla~~~K~~~~~~~ 189 (245)
T PF02366_consen 159 PFRRKWWLWLLLAGIALGLAILTKGPGLLLV 189 (245)
T ss_pred ccccccHHHHHHHHHHHHHHHHhchhHHHHH
Confidence 24678999999999999988765
No 16
>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI [].; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=94.63 E-value=0.97 Score=48.47 Aligned_cols=127 Identities=17% Similarity=0.328 Sum_probs=93.7
Q ss_pred CCCCchhHHHHHHHhhhccccCCceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHHHHHHHhccch-------------
Q 009885 61 LDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADV------------- 127 (523)
Q Consensus 61 LDYPPl~Ay~~~llg~ia~~~dp~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~~~~~~------------- 127 (523)
..+||+.-+.-..+.+ ...++.........--+++|++..+.+++..++.++
T Consensus 56 ~h~~PLlL~l~~~l~~---------------~~~~~~~~~~~~~llf~~~Dl~~A~~L~~i~~~~~~~~~~~~~~~~~~~ 120 (382)
T PF06728_consen 56 FHQPPLLLALFSFLLK---------------SSPNSPNSPILISLLFILVDLLIAWLLYRIAKSYQKQESKRQKSPNEKS 120 (382)
T ss_pred ccCcCHHHHHHHHHHh---------------cccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCchhcc
Confidence 5689998887665543 111222334456667789999998888877644311
Q ss_pred hhhHHHHHHHHHccceeeecccchhhhhHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q 009885 128 KRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLR 203 (523)
Q Consensus 128 ~~~~~~~~~~ll~P~llliDh~HFQYNg~llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~ 203 (523)
......++.+++||-.|+ -.+--.=..+---+++.+++.+.+|+...+++..+++--..--.+++.|+....+.+
T Consensus 121 ~~~~lv~~~YLfNP~tIl-scva~ST~~f~nl~i~~sl~~a~~g~~~~s~i~lAlatylSlYpi~Ll~Plll~l~~ 195 (382)
T PF06728_consen 121 SSPWLVAAFYLFNPLTIL-SCVALSTTVFTNLFILLSLYFAVKGNVFLSAISLALATYLSLYPILLLPPLLLLLYS 195 (382)
T ss_pred cchHHHHHHHHHCHHHHH-HHHhcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 234567899999999887 333344467777888999999999999999999999999888888888888877765
No 17
>PF05007 Mannosyl_trans: Mannosyltransferase (PIG-M); InterPro: IPR007704 PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilise nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=92.31 E-value=0.38 Score=49.32 Aligned_cols=78 Identities=21% Similarity=0.271 Sum_probs=59.4
Q ss_pred hhHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhh-----hhHHHHHHHHHHHH
Q 009885 154 NGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGF-----SRLSVLGAVVVAVF 228 (523)
Q Consensus 154 Ng~llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~~~~~~~~~~~-----~~l~~lg~~Vi~tf 228 (523)
|+++--+.+++++++.++|...||+++.+++.+|-=.+.|+|++..|+.++... +..+.. ++-++.|.+.++||
T Consensus 8 Esl~~~lVl~~l~~l~~~~~~~Aa~~lGlaVHfKIYPiIY~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~~f~~~s~~tf 86 (259)
T PF05007_consen 8 ESLLCFLVLLTLYFLLKGRWFLAAILLGLAVHFKIYPIIYALPILLYLSNRKNG-SFRSRLKRLLNPNRLKFGLISAITF 86 (259)
T ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHhhHHHHhhhccHHHHHHHHHHHhccccc-hHHHHHHHhcCHhHhhhHHHHHHHH
Confidence 677778899999999999999999999999999999999999999999665522 111111 13455666666666
Q ss_pred HHHh
Q 009885 229 AAAY 232 (523)
Q Consensus 229 ~~~f 232 (523)
++.-
T Consensus 87 ~~l~ 90 (259)
T PF05007_consen 87 AALT 90 (259)
T ss_pred HHHH
Confidence 5543
No 18
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=91.95 E-value=2.3 Score=46.35 Aligned_cols=89 Identities=21% Similarity=0.230 Sum_probs=68.3
Q ss_pred HHHHHHhcc--chhhhHHHHHHHHHccceeeecccchhhhhHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHH
Q 009885 117 GVYRLTKNA--DVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAA 194 (523)
Q Consensus 117 ~~~~~~~~~--~~~~~~~~~~~~ll~P~llliDh~HFQYNg~llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~A 194 (523)
.+++++++. +++......+.+++||++.=..-.-|+=+++..-+++++++++.++|.....++...++..|--.-...
T Consensus 76 pl~~lar~~~~~~~~a~~~~~~ylL~p~~~~~~~~dFH~~~~avPll~~~~~~~~~~r~~~~~~~~ll~llvKEd~~l~v 155 (449)
T PF09852_consen 76 PLYRLARRRLLSRRLALLIALAYLLSPGLQGANLFDFHPVAFAVPLLLWALYALERRRWRLFILWALLLLLVKEDLGLTV 155 (449)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHhHHHHhhhhCCCcHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHhhHHHHH
Confidence 456676664 344566778899999999976555566699999999999999999999999999999999996555555
Q ss_pred HHHHHHHHHHH
Q 009885 195 PVYFVYLLRHY 205 (523)
Q Consensus 195 P~~f~yLL~~~ 205 (523)
-.+..+++-+.
T Consensus 156 ~~~gl~~~~~~ 166 (449)
T PF09852_consen 156 AGIGLYLLLRR 166 (449)
T ss_pred HHHHHHHHHhC
Confidence 55666665443
No 19
>KOG3893 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=91.69 E-value=0.52 Score=49.84 Aligned_cols=153 Identities=16% Similarity=0.218 Sum_probs=107.4
Q ss_pred CCCCCchhHHHHHHHhhhccccCCceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHHHHHHH--hccchhhhHHHHHHH
Q 009885 60 TLDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLT--KNADVKRRYLIWVLI 137 (523)
Q Consensus 60 tLDYPPl~Ay~~~llg~ia~~~dp~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~--~~~~~~~~~~~~~~~ 137 (523)
|-.|-|.-||.. -|+ --++++++-.+ -..+|++...-.+++. |+.+++++.+.....
T Consensus 76 TYRYtP~la~ll----------~pn------i~~~p~~GK~L-----f~~~Dll~a~L~~kLl~~~~i~~~~a~~~~~fW 134 (405)
T KOG3893|consen 76 TYRYTPILAWLL----------TPN------IYLFPAWGKLL-----FAIFDLLIATLIYKLLHMRSISRKQALIYASFW 134 (405)
T ss_pred hhcccHHHHHHh----------ccc------eecCchHHHHH-----HHHHHHHHHHHHHHHHhhhhcchhhhhHhhhhh
Confidence 346888877742 132 22444544444 4689999888888765 455666677778889
Q ss_pred HHccceeeecc-cchhhhhHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhh
Q 009885 138 VWSPALVMVDH-LHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSR 216 (523)
Q Consensus 138 ll~P~llliDh-~HFQYNg~llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~~~~~~~~~~~~~ 216 (523)
++||-..+|.. |-- ++++-.+.++-++.+.+++.-.+|+....++.+|--.+.+.|+++.++....-.+.....+..
T Consensus 135 LlNPl~aiIStRGNa--esi~~~lvi~~lyllqK~~v~~A~l~~GlaIh~KIYPliY~l~i~l~ls~~~~~s~~~~~l~s 212 (405)
T KOG3893|consen 135 LLNPLTAIISTRGNA--ESIVAFLVILTLYLLQKSEVFLAGLAHGLAIHLKIYPLIYSLAIYLSLSTRKTQSTPLDKLCS 212 (405)
T ss_pred hcCchheeeecCCch--HHHHHHHHHHHHHHHHHhHHHHHHHHhhheeeeEechHHhhhhhheEEecCCCCCcHHHHHHH
Confidence 99999888653 444 889999999999999999999999999999999999999999999888543311111111222
Q ss_pred H------HHHHHHHHHHHHHHhhhh
Q 009885 217 L------SVLGAVVVAVFAAAYGPF 235 (523)
Q Consensus 217 l------~~lg~~Vi~tf~~~f~PF 235 (523)
+ +++..+.+.+|+.+=.-|
T Consensus 213 LL~~~k~l~~~~~tLtsf~~~~~~f 237 (405)
T KOG3893|consen 213 LLSINKQLCLILGTLTSFAACTWTF 237 (405)
T ss_pred HhccccchhhhHHHHHHHHHHHHHH
Confidence 2 445577777788773333
No 20
>PHA01514 O-antigen conversion protein C
Probab=89.39 E-value=41 Score=37.72 Aligned_cols=218 Identities=12% Similarity=0.199 Sum_probs=108.8
Q ss_pred CcchhHHHHHHHHHH--HHHHHHhcCCcccchhhhhhhHHHHhccCCCcccccccCCccCCCCCchhHHHHHHHhhhccc
Q 009885 3 SSSSTRQLLWFFAIA--VCVKLLLIPAYHSTDFEVHRHWLALTHSLPLSNWYADETSPWTLDYPPFFACFERFLSIFAHY 80 (523)
Q Consensus 3 ~~~~~~~~~~~~~~~--~~lK~ll~P~y~S~DfE~~R~WmaiT~~LP~~~WY~~~ts~WtLDYPPl~Ay~~~llg~ia~~ 80 (523)
++.||+....+++++ ..+=+++...|+=+|.+- ++|.. --|+-|==|+..+..++++ .++.
T Consensus 4 ~~~d~~~~~~~l~~~liyi~PLlla~~~YiDD~~R-----si~G~-----------~gW~~~GRPlad~l~~~L~-~g~~ 66 (485)
T PHA01514 4 NSNDRIFISIFLGLAIIYTFPLLTHQSFFVDDLGR-----SLYGG-----------LGWSGNGRPLSDFIFYIIN-FGTP 66 (485)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHcCCCcccccHhH-----HhcCc-----------CChhhcCchHHHHHHHHHc-CCCC
Confidence 355666666665555 344445556666678754 34432 3455566688888888886 2321
Q ss_pred cCCceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHHHHHHHhcc-c--hhhhHHHHHHHHHccceeeecccchhhhhHH
Q 009885 81 IDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNA-D--VKRRYLIWVLIVWSPALVMVDHLHFQYNGFL 157 (523)
Q Consensus 81 ~dp~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~~~~-~--~~~~~~~~~~~ll~P~llliDh~HFQYNg~l 157 (523)
. +++ + =++.|++=.++..+...+.+.. + .....++.+.++.||= ..-|..++|+|..
T Consensus 67 ~----~Di-------~-------PLpliLs~~~ls~a~~~l~~~~f~~~~~~~~L~~~~l~~NPf--fLqNLSYrfDsl~ 126 (485)
T PHA01514 67 I----IDA-------S-------PLPLMLGIVILALALSCIREKLFGDDYITASLCFMMILANPF--FIENLSYRYDSLT 126 (485)
T ss_pred c----ccc-------c-------cHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHhCHH--HHhhhhhccCcHH
Confidence 1 111 0 1233455444444433332222 2 2223444556777884 4689999999987
Q ss_pred HHHHHHHHH----HHHcCCc---hhHHHHHHHHhhhhhhHHHHHHHHH-HHHHHHHhhcccch-hhhhHHHHHHHHHHHH
Q 009885 158 LGWLLLSIS----FLQEGKD---LMGGFLFAVLLCFKHLFAVAAPVYF-VYLLRHYCWKGLVR-GFSRLSVLGAVVVAVF 228 (523)
Q Consensus 158 lGlll~si~----~~~~~~~---l~~a~~F~~~L~~Khm~LY~AP~~f-~yLL~~~~~~~~~~-~~~~l~~lg~~Vi~tf 228 (523)
.++.+..-. ...+++. +.++++=.+++|.=|-.+-.-...- +..++....++..+ -+++++.-++..+...
T Consensus 127 Malsv~lsi~~~~l~~~~~~~~~~~~~il~~~~l~lYQ~s~nIfi~l~~~~il~~~~~~~~~~~i~k~~~~~~~~~i~~~ 206 (485)
T PHA01514 127 MCMSVAISIISSYVAYQYKPINIIISSILTIAFLSLYQAALNTYAIFLLAFIISDVVKKNSISNITKNTASSVAGLIVGY 206 (485)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 777544333 2234333 3555555567787777665554432 22222222221111 1222222122222211
Q ss_pred ---HHHhhhhcccccccchhhhhccCCccccc
Q 009885 229 ---AAAYGPFLYHGQIQQVFNRMFPFGRGLCH 257 (523)
Q Consensus 229 ---~~~f~PFi~~~ql~Qvl~RLFPF~RGL~h 257 (523)
.....|....+.=.+-=+++-|++.|+.+
T Consensus 207 llY~~iI~~~~~~~~y~~~hs~ii~~~~~l~~ 238 (485)
T PHA01514 207 FAYSYFIAKRLVTGSYNIEHSKIIEINSSLFE 238 (485)
T ss_pred HHHHHHHHHHhhcCCcccccccccCCchhhHH
Confidence 12233554334444445677788877764
No 21
>PRK13375 pimE mannosyltransferase; Provisional
Probab=89.07 E-value=39 Score=37.12 Aligned_cols=187 Identities=22% Similarity=0.276 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHhc---CCcc-cchhhhhhhHHH-HhccCCCccccccc-C--CccCCCCCchhHHHHHHHhhhccccC
Q 009885 11 LWFFAIAVCVKLLLI---PAYH-STDFEVHRHWLA-LTHSLPLSNWYADE-T--SPWTLDYPPFFACFERFLSIFAHYID 82 (523)
Q Consensus 11 ~~~~~~~~~lK~ll~---P~y~-S~DfE~~R~Wma-iT~~LP~~~WY~~~-t--s~WtLDYPPl~Ay~~~llg~ia~~~d 82 (523)
.+.++++.+.|..-. |... --|+|+-|.=-+ ..+.-++.+.=+.+ + ..-.--||||+|-...=++.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~vDl~VYr~g~~~~~~g~~LYd~~~~~~~~~~~LpFtYPPfaallf~PLalLp---- 96 (409)
T PRK13375 21 PLLLVLSVAARLAWTYLAPNGANFVDLHVYVGGAAALDHPGTLYDYVYADQTPDFPLPFTYPPFAALVFYPLHLLP---- 96 (409)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCCccHHHHHHhHHHHccCCcccCccccccCCCCCCCCCCCcHHHHHHHHHHhcc----
Confidence 346667777776533 4433 359888665211 11334555543322 2 1123479999999888777643
Q ss_pred CceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHHHHHHH-hccchh---hhHH-H-HHHHHHccceeeecccchhhhhH
Q 009885 83 PQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLT-KNADVK---RRYL-I-WVLIVWSPALVMVDHLHFQYNGF 156 (523)
Q Consensus 83 p~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~-~~~~~~---~~~~-~-~~~~ll~P~llliDh~HFQYNg~ 156 (523)
.. ....+++ +.-+..++.+.+.. +..+.+ .+.. . ....+..+.+- .--.+.|-|.+
T Consensus 97 ~~------------~a~~l~~-----~~~~~al~~~v~~~~r~l~~~~~~~~~a~~~~~~~l~~ePv~-~tl~~GQIN~l 158 (409)
T PRK13375 97 FG------------VVAFLWQ-----LATIAALYGVVRISQRLLGGGAGGHRVAMLWTAVGIWLEPVR-STFDYGQINVF 158 (409)
T ss_pred HH------------HHHHHHH-----HHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHhHHHH-HHHHhCcHHHH
Confidence 11 0012222 22222333332222 211111 1111 1 11112223221 12234688999
Q ss_pred HHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHHHHHHhh
Q 009885 157 LLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYG 233 (523)
Q Consensus 157 llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~~~~~~~~~~~~~l~~lg~~Vi~tf~~~f~ 233 (523)
++.+.++. +.++|...+|++..++-+.|-....+. .|+|.+ |+++-...-+.+.+++.++.|.
T Consensus 159 L~~Lv~~d---ll~~r~~~aGvliGLAaaIKlTPavf~----l~lL~~-------RrWra~~~A~~t~~~~~~lg~~ 221 (409)
T PRK13375 159 LMLAVLYA---VYSSRWWLSGLLVGLAAGVKLTPAITG----LYFLGA-------RRWAAAAFSAVVFLATVGVSYL 221 (409)
T ss_pred HHHHHHHH---HhcCCccHHHHHHHHHHHhhhhhHHHH----HHHHHh-------CHHHHHHHHHHHHHHHHHHHHH
Confidence 99888865 347788899999999999999987743 333332 2566555555555555555443
No 22
>PF14897 EpsG: EpsG family
Probab=86.88 E-value=9 Score=38.54 Aligned_cols=141 Identities=16% Similarity=0.225 Sum_probs=80.6
Q ss_pred ccchhhhhhhHHHHhccCCCcccccccCCccCCCCCchhHHHHHHHhhhccccCCceEEeccCCCCCCcchhHhHHHHHH
Q 009885 29 HSTDFEVHRHWLALTHSLPLSNWYADETSPWTLDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVI 108 (523)
Q Consensus 29 ~S~DfE~~R~WmaiT~~LP~~~WY~~~ts~WtLDYPPl~Ay~~~llg~ia~~~dp~~v~l~~s~gy~s~~~~~FmR~tVI 108 (523)
..+|++...+..+--.+.... +|+ .++-|.+.+..++.+.++ .|++. + + .
T Consensus 21 ~g~D~~~Y~~~y~~~~~~~~~---~~~-----~~~E~~~~~l~~~~~~~~--~~~~~----------------~-~---~ 70 (330)
T PF14897_consen 21 VGTDYYNYYEIYDEISNNSFN---FSE-----YGFEPGFYLLNYLFSYFG--FNYQF----------------F-F---F 70 (330)
T ss_pred CCccHHHHHHHHHHHhccccc---ccc-----ccCCHHHHHHHHHHHHHC--CCHHH----------------H-H---H
Confidence 347999988887655443222 222 567789999888888765 11111 1 1 1
Q ss_pred HHHHHHHHHHHHHHhccchhhhHHHHHHHHHccceeeecccchhhhhHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhh
Q 009885 109 LSDLWLLYGVYRLTKNADVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKH 188 (523)
Q Consensus 109 ~sDl~~~~~~~~~~~~~~~~~~~~~~~~~ll~P~llliDh~HFQYNg~llGlll~si~~~~~~~~l~~a~~F~~~L~~Kh 188 (523)
+..++.........++..++.... ..+.+..............=+++..++.++|+..+.++|...+.++..++..+-.
T Consensus 71 i~~~i~~~~~~~~i~~~~~~~~~~-~~~~l~~~~~~~~~~~~~iRq~~A~~~~~~a~~~~~~~k~~~~~~~~lla~~fH~ 149 (330)
T PF14897_consen 71 IISFISLFLFFFFIKKYSKNYPIF-LSLFLFFSFFFFFYSFNQIRQSLAISFFLLALSYLYKKKWIKFILLVLLAILFHY 149 (330)
T ss_pred HHHHHHHHHHHHhHHHcccchHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHH
Confidence 222233333444444433332121 2222222222333344444578888899999999998888877777777877777
Q ss_pred hHHHHHHHHHHH
Q 009885 189 LFAVAAPVYFVY 200 (523)
Q Consensus 189 m~LY~AP~~f~y 200 (523)
..+...|.++..
T Consensus 150 Saii~l~~~~l~ 161 (330)
T PF14897_consen 150 SAIIFLPLYFLS 161 (330)
T ss_pred HHHHHHHHHHHH
Confidence 777777764433
No 23
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=86.02 E-value=9.8 Score=41.73 Aligned_cols=117 Identities=21% Similarity=0.241 Sum_probs=78.9
Q ss_pred HHHHhcc--chhhhHHHHHHHHHccceeeecccchhhhhHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHH
Q 009885 119 YRLTKNA--DVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPV 196 (523)
Q Consensus 119 ~~~~~~~--~~~~~~~~~~~~ll~P~llliDh~HFQYNg~llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~ 196 (523)
+++.+.. +++.+..+.++..++|+=+.---.-= ++...-+.+++++...+++.+.++++|+++-...--.+-.+..
T Consensus 131 ~~l~~~~~~~~~~a~~a~ll~~~~PasiF~sa~Ys--Eslf~~lsf~gl~~~~~~~~~~a~~~~~la~~~RsnGll~~~~ 208 (443)
T PF04188_consen 131 YRLTRRVFKSRKLALLAALLFIFSPASIFLSAPYS--ESLFALLSFAGLYLLERGRWWLAGLLFALATLTRSNGLLLAGF 208 (443)
T ss_pred HHHHHHhccccHHHHHHHHHHHHccHHHHhhcCcc--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 4444433 23334556778889998654333322 6777778889999999999999999999999999999999998
Q ss_pred HHHHHHHHHhhccc-chhhhhHHHHHHHHHHHHHHHhhhhcc
Q 009885 197 YFVYLLRHYCWKGL-VRGFSRLSVLGAVVVAVFAAAYGPFLY 237 (523)
Q Consensus 197 ~f~yLL~~~~~~~~-~~~~~~l~~lg~~Vi~tf~~~f~PFi~ 237 (523)
+...+++.+..+-. .+...+.++.....+...+++.+||+.
T Consensus 209 ~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~~i~~pf~~ 250 (443)
T PF04188_consen 209 FAYELLGIYYLDLRQLRRQRRLVRALISAILSGLLIFLPFVL 250 (443)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 88888887754200 012223333333334444567889984
No 24
>TIGR03766 conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.
Probab=85.88 E-value=8.4 Score=42.58 Aligned_cols=99 Identities=21% Similarity=0.337 Sum_probs=62.6
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHhcc-chhhhHHHHHHHHHccce------eeecccchhhhhHHHHHHHHHHHHH---H
Q 009885 100 IYFLRISVILSDLWLLYGVYRLTKNA-DVKRRYLIWVLIVWSPAL------VMVDHLHFQYNGFLLGWLLLSISFL---Q 169 (523)
Q Consensus 100 ~~FmR~tVI~sDl~~~~~~~~~~~~~-~~~~~~~~~~~~ll~P~l------lliDh~HFQYNg~llGlll~si~~~---~ 169 (523)
..++=+.++.+|+..+ ..++..|+. +++...++..+.++.|++ ...|+. .+.++.+++.+. .
T Consensus 139 ~~~~llNil~~~~si~-liy~i~k~lf~~~~a~~a~~l~~l~~~~~~y~~~~Ysd~~-------~l~~~~l~l~~~~~~~ 210 (483)
T TIGR03766 139 LFFDVVNIVLVDLSAL-ILYKAVKKVFNKKKAFVALYLFVLLLALSPYILIPYTDTW-------VLPFVSLFLFLYTVIS 210 (483)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHhhhH-------HHHHHHHHHHHHHHHH
Confidence 3456777888886443 344444443 444455556666777775 335554 223333443322 2
Q ss_pred cCC--------chhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHh
Q 009885 170 EGK--------DLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYC 206 (523)
Q Consensus 170 ~~~--------~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~~~ 206 (523)
+++ -+.+|++.+++-.+|...+...+|.+++++-...
T Consensus 211 ~~~~~~~~~~~~Il~gillal~~~iKp~~iI~liA~~i~~~l~~~ 255 (483)
T TIGR03766 211 KKTDLRKKIALSILLGVLLAIAYFIKPSAIIFVIAIFIVLFLQLL 255 (483)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 211 1578999999999999999999999999987654
No 25
>TIGR03663 conserved hypothetical protein TIGR03663. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.
Probab=82.16 E-value=85 Score=34.56 Aligned_cols=95 Identities=16% Similarity=0.138 Sum_probs=58.8
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHh-ccchhhhHHHHHHHHHccceeeecccchhhhhHHHHHHHHHHHHHHc----CC---
Q 009885 101 YFLRISVILSDLWLLYGVYRLTK-NADVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQE----GK--- 172 (523)
Q Consensus 101 ~FmR~tVI~sDl~~~~~~~~~~~-~~~~~~~~~~~~~~ll~P~llliDh~HFQYNg~llGlll~si~~~~~----~~--- 172 (523)
.-.|+...++=+++ ..++...+ ..+++...++++++.++|..+..++.- .=|+.+..+.+++++++.+ ++
T Consensus 71 ~a~RL~~aL~g~~v-~l~~~~~r~~~~~~~al~AAllla~sp~~~~~sr~~-~~D~~l~~f~~lal~~l~r~~~~~~~~~ 148 (439)
T TIGR03663 71 ATARLLPAVFGVLL-PLTAWLYRKRLGDNEVLWAAVLLAFSPVMVYYSRFM-RNDIFVAFFTLLAVGAAFRYLDTGKRRY 148 (439)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHcCChHH
Confidence 46888444443543 33333333 345555566677777899987755432 2346667777777665432 22
Q ss_pred chhHHHHHHHHhhhhhhHHHHHHHH
Q 009885 173 DLMGGFLFAVLLCFKHLFAVAAPVY 197 (523)
Q Consensus 173 ~l~~a~~F~~~L~~Khm~LY~AP~~ 197 (523)
.+.+++.+++++.-|.....+.+.+
T Consensus 149 ~~lag~~~gLa~ltKg~~~l~~~~~ 173 (439)
T TIGR03663 149 LFLAASALALAFTSKENAYLIILIF 173 (439)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999866655433
No 26
>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function.
Probab=74.80 E-value=62 Score=34.14 Aligned_cols=120 Identities=18% Similarity=0.284 Sum_probs=73.3
Q ss_pred CCchhHHHHHHHhhhccccCCceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHccc
Q 009885 63 YPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADVKRRYLIWVLIVWSPA 142 (523)
Q Consensus 63 YPPl~Ay~~~llg~ia~~~dp~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~~~~~~~~~~~~~~~~ll~P~ 142 (523)
|||+.=..+-+-=.+|+.++.+. ......+|+-..+.-.++.+.+.+..++. + ...+.+.+.|-
T Consensus 95 y~p~~Ylp~alGi~ig~ll~l~~-----------~~~~~l~Rl~nll~~~~l~~~Ai~~~p~~----k-~l~~~i~l~Pm 158 (389)
T PF09913_consen 95 YPPLYYLPQALGIWIGRLLGLSV-----------LVMYYLGRLFNLLLYALLVYLAIKLAPRG----K-WLLALIALLPM 158 (389)
T ss_pred CCcHhhHHHHHHHHHHHHhCCCH-----------HHHHHHHHHHHHHHHHHHHHHHHHHcchh----H-HHHHHHHHHHH
Confidence 88875333333234676665442 23568999988888887777666554321 1 23555666675
Q ss_pred eeeecccchhhhhHHHHHHHHHHHHHHc-C--C------chhHHHHHHHHhhhhhhHHHHHHHHHH
Q 009885 143 LVMVDHLHFQYNGFLLGWLLLSISFLQE-G--K------DLMGGFLFAVLLCFKHLFAVAAPVYFV 199 (523)
Q Consensus 143 llliDh~HFQYNg~llGlll~si~~~~~-~--~------~l~~a~~F~~~L~~Khm~LY~AP~~f~ 199 (523)
.+-. -.-+.||++..++..+.++.+.+ . + .+..++...++..-|-.++-.++..+.
T Consensus 159 ~~~~-~aS~s~D~~~~~~~~l~~a~~l~~~~~~~~~~~~~~~l~v~~~ll~~~K~~y~~l~~l~l~ 223 (389)
T PF09913_consen 159 TLFQ-AASVSYDGLIIALAFLFIALLLRLYRKKKITRRDLILLGVLAVLLALSKPPYIPLLLLLLL 223 (389)
T ss_pred HHHH-HHhcCHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4332 23567899999998888886655 1 1 245667777778889444444444333
No 27
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=60.46 E-value=69 Score=37.49 Aligned_cols=142 Identities=15% Similarity=0.128 Sum_probs=90.6
Q ss_pred cccccCCccCCCCCchhHHHHHHHhhhccccCCceEEeccC--CCCCCcchhHhHHHHHHHHHHHHHHHHHHHHhccchh
Q 009885 51 WYADETSPWTLDYPPFFACFERFLSIFAHYIDPQIVDLHNG--LNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADVK 128 (523)
Q Consensus 51 WY~~~ts~WtLDYPPl~Ay~~~llg~ia~~~dp~~v~l~~s--~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~~~~~~~ 128 (523)
=|.+++.|--. +||+-++.--+-|.++. .||.+-.- .. ..|...-.-..||...-..-.+....++.-+|..+.+
T Consensus 61 ~Yl~~~~~fDv-HPPL~kml~al~~~L~g-~~g~f~f~-~~g~~~~~~~~~y~~mR~f~A~lgsl~vpl~y~t~r~~~~s 137 (699)
T COG1928 61 YYLNGTPFFDV-HPPLGKMLIALVGGLEG-YDPPFDFQ-LIGLTEYPFGYNYVGMRFFNALLGSLTVPLVYLIARRIGYS 137 (699)
T ss_pred HhhcCCccccc-CCcHHHHHHHhhhhhhc-cCCCcccc-cCCcccccCCCChHHHHHHHHHHHhHHHHHHHHHHHHhcch
Confidence 35555555545 79999998877777765 44554332 22 3344444556899888777777777777777776555
Q ss_pred hhHHHHHHHHHccceeeecccchh------hhhHHHHHHHHHHHHHHcC---C---------chhHHHHHHHHhhhhhhH
Q 009885 129 RRYLIWVLIVWSPALVMVDHLHFQ------YNGFLLGWLLLSISFLQEG---K---------DLMGGFLFAVLLCFKHLF 190 (523)
Q Consensus 129 ~~~~~~~~~ll~P~llliDh~HFQ------YNg~llGlll~si~~~~~~---~---------~l~~a~~F~~~L~~Khm~ 190 (523)
+...+. .-.++++||.|.- -|++++-+...++++..+- + -++.|+...+++..|=..
T Consensus 138 ~l~~~l-----~~llv~~dn~~~t~sR~ILLDs~LlfF~~~~~y~~~r~~~~~p~s~~w~~~Ll~tGisLGcaiS~KwvG 212 (699)
T COG1928 138 RLVAAL-----AGLLVAFDNSFVTESRFILLDSFLLFFIVAAAYCFLRFHRQQPFSRRWLKWLLLTGISLGCAISVKWVG 212 (699)
T ss_pred HHHHHH-----HHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHhcceeeeEEEeeehh
Confidence 433221 2224457888764 4788888888888876531 1 246788888999999988
Q ss_pred HHHHHHHHHH
Q 009885 191 AVAAPVYFVY 200 (523)
Q Consensus 191 LY~AP~~f~y 200 (523)
+...-....+
T Consensus 213 lft~~~vgl~ 222 (699)
T COG1928 213 LFTTGVVGLL 222 (699)
T ss_pred HHHHHHHHHH
Confidence 7665444433
No 28
>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]
Probab=59.06 E-value=1.5e+02 Score=35.05 Aligned_cols=113 Identities=23% Similarity=0.297 Sum_probs=66.6
Q ss_pred ccC--CCCCchhHHHHHHHhhhccccCCceEEeccCCCCCCcchhHhHHHHHHHHHHHH----HHHHHHHHhcc-chhhh
Q 009885 58 PWT--LDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWL----LYGVYRLTKNA-DVKRR 130 (523)
Q Consensus 58 ~Wt--LDYPPl~Ay~~~llg~ia~~~dp~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~----~~~~~~~~~~~-~~~~~ 130 (523)
-|| .||||++-|.--+.+.+-+.+.|.. -+.+++..+.++ +.++|...|+. +++..
T Consensus 80 P~G~~i~~~pl~~~l~~~~~~~~~~~~~~~-----------------~~~~~~~~PailG~L~vI~vYl~~r~i~~~~~g 142 (773)
T COG1287 80 PPGSPIDFPPLFLYLTAALGLILGSIFPVS-----------------LETAALLFPAILGVLTVIPVYLLGRRILGDKTG 142 (773)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHccCchH-----------------HHHHHHHhhHHHhhHHHHHHHHHHHHHhcchhh
Confidence 688 9999999998888887776666621 233444455443 55677777776 45556
Q ss_pred HHHHHHHHHccceee------ecccchhhhhHHHHHHHHHHHHHHc-----CCchhHHHHHHHHhhhhhh
Q 009885 131 YLIWVLIVWSPALVM------VDHLHFQYNGFLLGWLLLSISFLQE-----GKDLMGGFLFAVLLCFKHL 189 (523)
Q Consensus 131 ~~~~~~~ll~P~lll------iDh~HFQYNg~llGlll~si~~~~~-----~~~l~~a~~F~~~L~~Khm 189 (523)
..+++++.+.|+.+- -||-=+ |-+..-+.++.+..... .|...-+++.++++..=..
T Consensus 143 ~~aa~ll~~~p~~~~rt~~G~~d~~~~--~~~~~~~~l~~~~~aL~~~~~~~~~~~~~~lag~~~~l~~~ 210 (773)
T COG1287 143 LLAALLLALAPGYLSRTVAGFYDTDMF--ELLLPLFALFFFLLALKAAKKLKKPVIYALLAGLALGLLAL 210 (773)
T ss_pred HHHHHHHHHhhHHHHHhhcCccCCCch--HHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHH
Confidence 777888888998332 455443 44444444443333332 2555555555544444333
No 29
>PF14264 Glucos_trans_II: Glucosyl transferase GtrII
Probab=41.60 E-value=4e+02 Score=27.21 Aligned_cols=97 Identities=23% Similarity=0.311 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHhccchhh---hHHHHHHHHHccceeeecccchhhhhH--HHHHHHHHHHH--HHcCC--chhHHHH
Q 009885 109 LSDLWLLYGVYRLTKNADVKR---RYLIWVLIVWSPALVMVDHLHFQYNGF--LLGWLLLSISF--LQEGK--DLMGGFL 179 (523)
Q Consensus 109 ~sDl~~~~~~~~~~~~~~~~~---~~~~~~~~ll~P~llliDh~HFQYNg~--llGlll~si~~--~~~~~--~l~~a~~ 179 (523)
++=+++..+...+++..++++ ..+..+.+..||-.+ ++.-|+|++. ++|+++..++. ..+++ .+.|+++
T Consensus 55 Ls~~~la~s~~~~~~~~~~~~~~~~~l~~~~~~~~P~~~--~~lsy~~~s~~~~ls~~l~~la~~~~~k~~~~~~~~~~l 132 (319)
T PF14264_consen 55 LSILFLALSAVLLVRLFDIKSSFISVLFSLLFISSPFFL--ENLSYRFDSLPMALSLLLAVLAFYFLKKSKIGFLISILL 132 (319)
T ss_pred HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhHHHH--HHHHHHHccHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 333344444555555544333 344566788899766 7777777754 55555444444 33332 2468888
Q ss_pred HHHHhhhhhhHHHHHHHHHHHHH-HHHhh
Q 009885 180 FAVLLCFKHLFAVAAPVYFVYLL-RHYCW 207 (523)
Q Consensus 180 F~~~L~~Khm~LY~AP~~f~yLL-~~~~~ 207 (523)
-+++++.=|-+.-......+..+ ..+..
T Consensus 133 l~~sl~~YQa~~~v~i~l~~~~~l~~~~~ 161 (319)
T PF14264_consen 133 LVLSLGIYQASINVFISLVLIILLLDLLK 161 (319)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88889999988877766664443 44433
No 30
>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2.4.1.- from EC [, ]. At least some members are localised in endoplasmic reticulum and involved in GPI anchor biosynthesis [, ]. In yeast the SMP3 (YOR149C) has been implemented in plasmid stability [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0006506 GPI anchor biosynthetic process, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=41.01 E-value=4.8e+02 Score=27.93 Aligned_cols=101 Identities=20% Similarity=0.182 Sum_probs=50.6
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHhc-cchhhhHHHHHHHHHccceeeecccchhhhhHHHHHHHHHHHHHHc--------
Q 009885 100 IYFLRISVILSDLWLLYGVYRLTKN-ADVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQE-------- 170 (523)
Q Consensus 100 ~~FmR~tVI~sDl~~~~~~~~~~~~-~~~~~~~~~~~~~ll~P~llliDh~HFQYNg~llGlll~si~~~~~-------- 170 (523)
....|+.--+.=.+.-+..++..++ .+++.+....++...++..... ..+.==|++-..+++++++...+
T Consensus 81 ~~~~Rl~~~~~s~~~d~~~~~~~~~~~~~~~a~~~l~l~~~s~~~~~~-~~Rtlsns~e~~l~~~al~~~~~~~~~~~~~ 159 (418)
T PF03901_consen 81 FYAPRLVLALLSALSDYYLYRLVKRLFGSSVALWALLLSLFSWFMFYY-SSRTLSNSFETILVLLALYLWLRSLSRSNSS 159 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhhhhHHHhhhHHHHh-hcccCccHHHHHHHHHHHHHHHHhhccCCCc
Confidence 3455654333222233344443332 2333344445555566643221 11111399999999999998875
Q ss_pred ---CCc-hhHHHHHHHHhhhhh-hHHHHHHHHHHHH
Q 009885 171 ---GKD-LMGGFLFAVLLCFKH-LFAVAAPVYFVYL 201 (523)
Q Consensus 171 ---~~~-l~~a~~F~~~L~~Kh-m~LY~AP~~f~yL 201 (523)
++. ...+.+-+.++.+.. ..+..+|.....+
T Consensus 160 ~~~~~~~~~~~~l~~~~~~~Rpt~~~~~~pl~l~~l 195 (418)
T PF03901_consen 160 SSSKRYLLAIGLLAGLAVFFRPTSALFWLPLGLYLL 195 (418)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233 334444444455554 4445555545544
No 31
>COG3463 Predicted membrane protein [Function unknown]
Probab=29.88 E-value=4.5e+02 Score=29.45 Aligned_cols=83 Identities=19% Similarity=0.233 Sum_probs=61.7
Q ss_pred HHHHHHhcc--chhhhHHHHHHHHHccceeeecccchhhhhHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHH
Q 009885 117 GVYRLTKNA--DVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAA 194 (523)
Q Consensus 117 ~~~~~~~~~--~~~~~~~~~~~~ll~P~llliDh~HFQYNg~llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~A 194 (523)
..+.+++.. +.+.+.....++++||.+.=+----|.--.+.--++++|.+++++|+..+..+.-++.+.-|-+....+
T Consensus 104 p~y~lA~eil~~E~~al~isilYll~p~i~gi~~FDFH~m~~avp~~~~a~~f~~r~k~~l~li~lvlIl~tk~~a~lii 183 (458)
T COG3463 104 PIYLLAKEILNGEKEALAISILYLLNPYIEGINLFDFHPMAFAVPLFLLAYYFLKRKKWKLFLIFLVLILLTKEDAFLII 183 (458)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHhchhccCchhhhcchHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcccHHHH
Confidence 345555543 345567778999999988665555554578888889999999999999999999999999999844444
Q ss_pred HHHHH
Q 009885 195 PVYFV 199 (523)
Q Consensus 195 P~~f~ 199 (523)
--+-+
T Consensus 184 Isl~i 188 (458)
T COG3463 184 ISLLI 188 (458)
T ss_pred HHHHH
Confidence 33333
No 32
>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria. The function is not known.
Probab=25.38 E-value=6.4e+02 Score=24.56 Aligned_cols=60 Identities=20% Similarity=0.229 Sum_probs=48.2
Q ss_pred ecccchh--------hhhHHHHHHHHHHHHHHcC-------C-chhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Q 009885 146 VDHLHFQ--------YNGFLLGWLLLSISFLQEG-------K-DLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHY 205 (523)
Q Consensus 146 iDh~HFQ--------YNg~llGlll~si~~~~~~-------~-~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~~ 205 (523)
.|..+|| -|.++.+++++.+..-.++ | -+++|.+..++++.-++.++..|+....+..+.
T Consensus 95 S~sfW~~Av~aEVYal~~l~~al~~~l~l~w~~~~~~~~~~r~l~l~afl~GLs~g~H~~~ll~lP~~~~~~~~~~ 170 (178)
T PF11028_consen 95 SDSFWFQAVEAEVYALSSLFTALLLWLLLKWEREADEPRSDRWLLLIAFLCGLSLGVHLLNLLALPAIALLYFFKR 170 (178)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6788888 6888999999988877654 2 357899999999999999999999887654443
No 33
>KOG2647 consensus Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase [General function prediction only]
Probab=22.59 E-value=2.1e+02 Score=31.80 Aligned_cols=129 Identities=17% Similarity=0.250 Sum_probs=82.1
Q ss_pred hhhHHHHHHHHHccceeeecccchhhhhHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhh
Q 009885 128 KRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCW 207 (523)
Q Consensus 128 ~~~~~~~~~~ll~P~llliDh~HFQYNg~llGlll~si~~~~~~~~l~~a~~F~~~L~~Khm~LY~AP~~f~yLL~~~~~ 207 (523)
+.+.-+.++..+||+=|.-.-+== +++..-+.+.+++.+.+|+.--|+.+|+.+=+..-+.+.-++-.--=..+.. +
T Consensus 155 k~s~~a~liFcfnPAsIF~ts~YS--EsLfa~~s~~Gi~~~~~~~~~~~~~~~~l~~~~rSngil~~~~~~~~~~~~~-F 231 (444)
T KOG2647|consen 155 KISFYAALLFCFNPASIFLTAGYS--ESLFALFSFLGILFLEKGRQFTGTLLFSLATLVRSNGILSAGFLMHSQNRGF-F 231 (444)
T ss_pred hHHhhhhheeEecchHhhhhHHhh--HHHHHHHHHHHHHHHhcCCccceehHHHHHHHHHhhhhhhHHHHhhhhccee-e
Confidence 444555777888999777555544 7777888899999999999999999999988888887776653322211111 1
Q ss_pred c-cc--chhhhhHHHHHHHHHHHHHHHhhhhcccccccchhhhhccCCcccccccccCchhH
Q 009885 208 K-GL--VRGFSRLSVLGAVVVAVFAAAYGPFLYHGQIQQVFNRMFPFGRGLCHAYWAPNFWV 266 (523)
Q Consensus 208 ~-~~--~~~~~~l~~lg~~Vi~tf~~~f~PFi~~~ql~Qvl~RLFPF~RGL~haywA~NfWa 266 (523)
. +. .++-++.++.-..-....+...+||.+ .+-.--++|==.|+= |-..=||
T Consensus 232 ~~~L~~~~r~~~~~~~i~~~~l~~l~~~~p~~~---~qyy~y~~fC~~~~~----~e~spwC 286 (444)
T KOG2647|consen 232 IFSLTMLNRLRQLFKQIVSLFLSILTFLLPLAA---FQYYGYKLFCPPRTA----WEKSPWC 286 (444)
T ss_pred eeehHhhhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHhHHHHhCCCCCc----cccCccc
Confidence 1 11 113345555555555556777889964 333445555444443 4456688
No 34
>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells. A lipid-linked core-oligosaccharide is assembled at the membrane of the endoplasmic reticulum and transferred to selected asparagine residues of nascent polypeptide chains by the oligosaccharyl transferase (OTase) complex []. This family consists of the oligsacharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosccharyl transferase (OTase) complex of proteins and is required for its activity [].; GO: 0004576 oligosaccharyl transferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 3AAG_B 2ZAI_D 2ZAG_A 3RCE_A.
Probab=22.30 E-value=9.5e+02 Score=25.92 Aligned_cols=91 Identities=22% Similarity=0.331 Sum_probs=44.0
Q ss_pred CCCCchhHHHHHHHhhhccccCCceEEeccCCCCCCcchhHhHHHHHHHHHHHHHHHHHHHHhcc-chhhhHHHHHHHHH
Q 009885 61 LDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNA-DVKRRYLIWVLIVW 139 (523)
Q Consensus 61 LDYPPl~Ay~~~llg~ia~~~dp~~v~l~~s~gy~s~~~~~FmR~tVI~sDl~~~~~~~~~~~~~-~~~~~~~~~~~~ll 139 (523)
.||||++.+......++.....+ ..+ ..+ ..-...+++=+. ..+++.+.|+. +++...+++++..+
T Consensus 68 i~~~pl~~~l~~~~~~~~~~~~~--~~l---------~~v-~~~~ppvl~~L~-vi~~y~~~~~~~~~~~Gl~aA~l~a~ 134 (483)
T PF02516_consen 68 IDWPPLFPYLTAAFYAILGGFGP--VSL---------YEV-AFWLPPVLGALT-VIPVYLLGRRLGGRKAGLLAAFLLAI 134 (483)
T ss_dssp --TT-HHHHHHHHHHHS-SS-HH---------------HH-HHHHHHHHGGGG-HHHHHHHHHHTT-HHHHHHHHHHHTT
T ss_pred cCcccHHHHHHHHHHHHHHHhcc--hhH---------HHH-HHHHHHHHHHHH-HHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 68999999885555544322212 111 111 122344433332 34556666665 34445667788888
Q ss_pred ccceee------ecccchhhhhHHHHHHHHHHH
Q 009885 140 SPALVM------VDHLHFQYNGFLLGWLLLSIS 166 (523)
Q Consensus 140 ~P~lll------iDh~HFQYNg~llGlll~si~ 166 (523)
.|+.+. .||-=+ |-++..+.++...
T Consensus 135 ~p~~l~RT~~G~~D~~~~--~~~f~~l~~~~~~ 165 (483)
T PF02516_consen 135 SPGYLSRTMAGFYDHHML--ELFFPLLIIYFFL 165 (483)
T ss_dssp SHHHHHTSSTT--SGGGG--TTHHHHHHHHHHH
T ss_pred hHHHHHHhcCCCcccchH--HHHHHHHHHHHHH
Confidence 999554 677666 4444444444433
No 35
>PF14805 THDPS_N_2: Tetrahydrodipicolinate N-succinyltransferase N-terminal; PDB: 3EG4_A 3TDT_A 2TDT_A 1KGT_A 1TDT_A 1KGQ_A 3BXY_A 3GOS_A 3TK8_A.
Probab=20.15 E-value=43 Score=28.02 Aligned_cols=12 Identities=50% Similarity=0.850 Sum_probs=8.8
Q ss_pred ccccch---hhHHHh
Q 009885 354 GWHVHE---KASLHF 365 (523)
Q Consensus 354 g~hVHE---KaILl~ 365 (523)
+|+||| |||||-
T Consensus 52 ~W~vneWvKkAILL~ 66 (70)
T PF14805_consen 52 EWVVNEWVKKAILLY 66 (70)
T ss_dssp EEEE-HHHHHHHHHH
T ss_pred CEEeeHHHHHHHHhc
Confidence 699998 888864
Done!