Query         009887
Match_columns 523
No_of_seqs    201 out of 2412
Neff          11.1
Searched_HMMs 46136
Date          Thu Mar 28 18:31:15 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009887.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009887hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.5E-84 3.4E-89  625.8  46.2  455   52-515    25-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 3.4E-80 7.3E-85  585.6  38.4  465   35-515    13-499 (499)
  3 PLN02971 tryptophan N-hydroxyl 100.0 1.4E-79   3E-84  616.2  45.1  466   49-515    53-534 (543)
  4 PLN02687 flavonoid 3'-monooxyg 100.0 1.2E-78 2.6E-83  607.7  46.8  466   49-515    30-509 (517)
  5 PLN03234 cytochrome P450 83B1; 100.0 1.7E-78 3.8E-83  606.2  46.1  463   48-514    23-498 (499)
  6 PLN00110 flavonoid 3',5'-hydro 100.0 3.7E-78 8.1E-83  600.3  46.0  482   31-515     9-497 (504)
  7 PLN02183 ferulate 5-hydroxylas 100.0 2.9E-78 6.4E-83  604.8  43.6  460   49-516    32-513 (516)
  8 PLN03112 cytochrome P450 famil 100.0 1.8E-77 3.8E-82  600.6  46.6  482   33-515    13-508 (514)
  9 PTZ00404 cytochrome P450; Prov 100.0 1.2E-77 2.5E-82  597.6  42.1  457   44-514    20-482 (482)
 10 PLN02394 trans-cinnamate 4-mon 100.0 6.2E-77 1.3E-81  595.6  44.4  463   49-515    26-502 (503)
 11 PLN00168 Cytochrome P450; Prov 100.0 2.1E-76 4.6E-81  591.8  46.4  470   43-516    25-518 (519)
 12 PLN02966 cytochrome P450 83A1  100.0 1.1E-75 2.4E-80  584.8  44.1  462   46-513    22-498 (502)
 13 KOG0157 Cytochrome P450 CYP4/C 100.0 4.4E-76 9.5E-81  580.1  37.6  452   51-515    33-496 (497)
 14 PLN02500 cytochrome P450 90B1  100.0 2.8E-75   6E-80  580.7  39.9  442   46-513    31-488 (490)
 15 PLN02290 cytokinin trans-hydro 100.0 1.9E-75 4.1E-80  586.2  38.1  447   51-515    40-515 (516)
 16 PLN02655 ent-kaurene oxidase   100.0 1.7E-74 3.6E-79  570.9  41.4  451   55-516     1-465 (466)
 17 PLN03018 homomethionine N-hydr 100.0 3.6E-73 7.8E-78  565.2  45.8  493   23-517     7-526 (534)
 18 PLN02169 fatty acid (omega-1)- 100.0 6.5E-74 1.4E-78  568.7  40.1  447   54-514    32-499 (500)
 19 PLN02774 brassinosteroid-6-oxi 100.0 2.7E-73 5.9E-78  561.8  38.9  431   50-513    28-462 (463)
 20 PF00067 p450:  Cytochrome P450 100.0 3.4E-74 7.4E-79  575.5  31.0  450   55-511     1-463 (463)
 21 KOG0159 Cytochrome P450 CYP11/ 100.0 5.4E-73 1.2E-77  523.1  35.7  452   50-516    47-519 (519)
 22 PLN03195 fatty acid omega-hydr 100.0 1.1E-72 2.5E-77  565.6  38.2  453   55-515    32-516 (516)
 23 PLN02196 abscisic acid 8'-hydr 100.0 8.5E-72 1.8E-76  550.6  40.6  453   23-514     4-462 (463)
 24 PLN02738 carotene beta-ring hy 100.0 7.5E-72 1.6E-76  561.2  39.8  441   65-515   143-595 (633)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 1.7E-71 3.7E-76  547.8  36.6  436   48-516     2-451 (452)
 26 PLN02302 ent-kaurenoic acid ox 100.0 1.4E-70 3.1E-75  549.7  42.4  441   48-516    37-489 (490)
 27 PLN02987 Cytochrome P450, fami 100.0 7.2E-70 1.6E-74  534.6  40.4  452   32-516    10-470 (472)
 28 PLN02936 epsilon-ring hydroxyl 100.0 4.9E-70 1.1E-74  541.3  38.3  447   55-515    14-482 (489)
 29 KOG0684 Cytochrome P450 [Secon 100.0 2.8E-69 6.1E-74  485.6  35.4  442   55-515    34-485 (486)
 30 PLN02426 cytochrome P450, fami 100.0 1.7E-68 3.7E-73  528.9  41.6  438   61-515    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0 8.9E-60 1.9E-64  459.1  29.1  402   50-488    14-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 2.8E-55   6E-60  423.0  30.9  380   74-514    24-410 (411)
 33 PF12273 RCR:  Chitin synthesis  73.8     3.8 8.3E-05   32.5   3.2   14   44-57     23-36  (130)
 34 PF12554 MOZART1:  Mitotic-spin  65.3      23  0.0005   22.2   4.6   44  307-350     5-48  (48)
 35 PF08492 SRP72:  SRP72 RNA-bind  58.1     7.1 0.00015   25.7   1.5    7  430-436    44-50  (59)
 36 PF05952 ComX:  Bacillus compet  53.7      13 0.00029   24.2   2.2   26  329-354     3-28  (57)
 37 PF05393 Hum_adeno_E3A:  Human   49.1      29 0.00064   24.7   3.4    6   60-65     66-71  (94)
 38 PF09201 SRX:  SRX;  InterPro:   42.9      22 0.00047   27.9   2.3   23  458-480    18-40  (148)
 39 PTZ00370 STEVOR; Provisional    41.4      33 0.00071   31.0   3.4   19   29-47    264-282 (296)
 40 PRK06789 flagellar motor switc  39.8      22 0.00048   24.8   1.7   39  374-412    22-62  (74)
 41 PF13893 RRM_5:  RNA recognitio  35.2      82  0.0018   20.1   4.0   36   78-113     1-40  (56)
 42 PF13625 Helicase_C_3:  Helicas  34.8      99  0.0021   24.4   5.1   42   72-115    74-115 (129)
 43 PF01277 Oleosin:  Oleosin;  In  34.7 1.3E+02  0.0028   23.2   5.3   77    5-87     26-116 (118)
 44 PF12273 RCR:  Chitin synthesis  33.3      17 0.00036   28.8   0.4   25   28-52      4-28  (130)
 45 PF14129 DUF4296:  Domain of un  32.2 1.9E+02  0.0042   20.8   5.8   49  305-353    30-78  (87)
 46 PHA03049 IMV membrane protein;  31.8 1.5E+02  0.0032   20.0   4.4    9   49-57     27-35  (68)
 47 PF14483 Cut8_M:  Cut8 dimerisa  29.7      85  0.0018   18.6   2.8   18  330-347    17-35  (38)
 48 PF12444 Sox_N:  Sox developmen  28.8      36 0.00077   24.4   1.4   20  468-487    60-79  (84)
 49 PHA03162 hypothetical protein;  27.0      42 0.00091   26.1   1.6   25  454-478     2-26  (135)
 50 PF15183 MRAP:  Melanocortin-2   26.6 2.3E+02  0.0049   20.2   4.8   28   20-47     37-64  (90)
 51 PF05545 FixQ:  Cbb3-type cytoc  25.8 1.7E+02  0.0036   18.3   4.0   15   33-47     19-33  (49)
 52 KOG0114 Predicted RNA-binding   25.6 2.9E+02  0.0063   20.8   5.5   60   52-113    11-76  (124)
 53 COG1707 ACT domain-containing   25.5      91   0.002   25.5   3.2   39   71-109   153-196 (218)
 54 PF12508 DUF3714:  Protein of u  24.8      44 0.00096   28.7   1.5   42  367-411    52-94  (200)
 55 COG0851 MinE Septum formation   24.4 1.1E+02  0.0024   22.0   3.2   16  339-354    36-51  (88)
 56 PRK10597 DNA damage-inducible   24.0 1.9E+02   0.004   20.7   4.2   39   75-113    23-69  (81)
 57 PF15330 SIT:  SHP2-interacting  23.9 2.6E+02  0.0055   21.3   5.2   11   60-70     45-55  (107)
 58 PF06024 DUF912:  Nucleopolyhed  23.1      42 0.00091   25.2   1.0    7   36-42     78-84  (101)
 59 KOG3506 40S ribosomal protein   22.8      38 0.00083   21.7   0.6   11  451-461    12-22  (56)
 60 KOG3653 Transforming growth fa  21.6   4E+02  0.0087   26.5   7.2   39   83-122   221-260 (534)
 61 PF05961 Chordopox_A13L:  Chord  21.5 2.7E+02  0.0059   18.9   4.3    8   33-40     13-20  (68)
 62 COG4736 CcoQ Cbb3-type cytochr  21.5 2.3E+02  0.0049   18.9   3.9   19   29-47     15-33  (60)
 63 PF14550 Peptidase_U35_2:  Puta  21.1      63  0.0014   25.2   1.6   21  391-411    72-92  (122)
 64 PF11227 DUF3025:  Protein of u  20.7      56  0.0012   28.2   1.4   20  414-433   192-211 (212)
 65 COG3954 PrkB Phosphoribulokina  20.3 2.2E+02  0.0047   24.3   4.6   63  318-380    15-89  (289)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-84  Score=625.77  Aligned_cols=455  Identities=41%  Similarity=0.748  Sum_probs=397.6

Q ss_pred             CCCCCCCCCCCccccccccCcc-HHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCc-hHHHHH
Q 009887           52 PPLPPGPRPLPLVGNFLSLEPN-LHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDL-PAAASV  129 (523)
Q Consensus        52 ~~~~pgP~~~p~~G~~~~~~~~-~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~-~~~~~~  129 (523)
                      .++||||.++|++||+++++.. +++.+.++.++|||+|++|+|..++|||+|+++++|++.+++..|++|+. ......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            7889999999999999999776 99999999999999999999999999999999999999999999999987 223344


Q ss_pred             hhcC--Ccccc-CCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc-cCCCceehHHHHHHHHHHHHHHHHh
Q 009887          130 LAYG--GMSIA-ASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG-RVGSPIKLRELMFLTFLDVATRMLW  205 (523)
Q Consensus       130 ~~~~--~~~~~-~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~-~~~~~vd~~~~~~~~~~~~i~~~~f  205 (523)
                      +.++  ++... +|+.|+.+||+....+++...++.....-.++++.+++.+.+ ..++++|+...+..++.++|++++|
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~f  184 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRMLF  184 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHHh
Confidence            4433  44444 899999999999989999999999888888999999999975 2227999999999999999999999


Q ss_pred             cccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhc-cccccc-ccchhHHHHHHHHHHHHHHHHhhcCCCCCCCcCCC
Q 009887          206 GASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFP-LLARFD-LQGHQSKAKKLTARFDRIFESLLRPGQTGQDRNEG  283 (523)
Q Consensus       206 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  283 (523)
                      |.+++.. .++...++.+.+.+.....+.....+++| ++.++. ..+..++......++.++++..++++++.. . . 
T Consensus       185 G~rf~~~-~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~-~-  260 (489)
T KOG0156|consen  185 GRRFEEE-DEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-G-D-  260 (489)
T ss_pred             CCccccC-CchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c-c-
Confidence            9999886 24555668899999999999988999999 566653 334567777777778999999998876632 1 1 


Q ss_pred             CCCccHHHHHHHHhhcCCCC-CCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCccccc
Q 009887          284 KSSKDFLQTLLELQQQGDYS-LSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAPDSVVEEF  362 (523)
Q Consensus       284 ~~~~d~l~~ll~~~~~~~~~-l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~~~~~~~  362 (523)
                      ++..|+++.++...++++.. ++++++...+..+++||+|||++|+.|++.+|+.|||+|+|+|+||++++|.++.++.+
T Consensus       261 ~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~  340 (489)
T KOG0156|consen  261 EEGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSES  340 (489)
T ss_pred             CCCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChh
Confidence            22289999999987754333 89999999999999999999999999999999999999999999999999988889999


Q ss_pred             ccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCCCCCCcccccccCCC
Q 009887          363 HLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQDFRPDRFLEDVKIGD  442 (523)
Q Consensus       363 ~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeRwl~~~~~~~  442 (523)
                      |+.+||||+|||+||+|++|++|+.++|.+++|+.++||.||+||.|+++.+++||||++|+||++|+||||+++.   +
T Consensus       341 D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~---d  417 (489)
T KOG0156|consen  341 DLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN---D  417 (489)
T ss_pred             hhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc---c
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999863   1


Q ss_pred             CCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceeeeeccCC
Q 009887          443 FQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAVIPTPRS  515 (523)
Q Consensus       443 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  515 (523)
                      .......++|||.|.|.|||..+|.+++..+++.|+++|+|++.++ .++.... +.++..+.++.+...+|.
T Consensus       418 ~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  418 GKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             ccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceecCCcceeeeecCC
Confidence            1225568999999999999999999999999999999999999877 5555544 366777888888888774


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.4e-80  Score=585.60  Aligned_cols=465  Identities=25%  Similarity=0.402  Sum_probs=369.5

Q ss_pred             HHHHHHHHHhhCCCCCCCCCCCCCCCCCcccccccc--CccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHH
Q 009887           35 FAISCYAWLIKKPTRSTPPLPPGPRPLPLVGNFLSL--EPNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLK  112 (523)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~pgP~~~p~~G~~~~~--~~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~  112 (523)
                      ++.++|.+.+|.......+.+|||++.|++||+..+  .+.+..+..+...+||+++.++.+-+|.++|+|||.+++|+.
T Consensus        13 l~~l~y~~~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~i   92 (499)
T KOG0158|consen   13 LLVLLYLWLRWTYSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILI   92 (499)
T ss_pred             HHHHHHHHHHhhhhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHH
Confidence            333444444444445555589999999999999887  233355555555555999999999999999999999999999


Q ss_pred             hcCccccCC--CchHHHH-HhhcCCccccCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhcc--CCCcee
Q 009887          113 EHDVVFANR--DLPAAAS-VLAYGGMSIAASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSGR--VGSPIK  187 (523)
Q Consensus       113 ~~~~~f~~~--~~~~~~~-~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd  187 (523)
                      ++.+.|.++  +...... .+.........|+.|+++|..+. |.|++.+++.+.+.+.+.++++++.+...  .+..++
T Consensus        93 k~F~~F~~r~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~  171 (499)
T KOG0158|consen   93 KDFDNFYNRKRPIYGDPEDPLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGE  171 (499)
T ss_pred             HhCccCcCCCCCCcCCCCCcccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCcc
Confidence            998889884  3222212 12223334449999999999997 99999999999999999999999999862  225789


Q ss_pred             hHHHHHHHHHHHHHHHHhcccccCCCCchHHHHHHHHHHHHHHH-hCCCC----cchhhcccccccccchhHHHHHHHHH
Q 009887          188 LRELMFLTFLDVATRMLWGASVRGEDWDPIAIQFRELIEAMFQL-LGSGG----LSDLFPLLARFDLQGHQSKAKKLTAR  262 (523)
Q Consensus       188 ~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~~~~~~~~~~~~~~~~~  262 (523)
                      +.+.+.++|.|+|++++||.+.++..  .....+.......... .....    ....+|.+....  ..........+.
T Consensus       172 ~~dl~~~yT~DVI~~~AfG~~~~s~~--d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~  247 (499)
T KOG0158|consen  172 IKDLCARYTTDVIGSCAFGLDANSLR--DPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDF  247 (499)
T ss_pred             HHHHHHHHHHHHHhHhhcccchhhhc--CchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHH
Confidence            99999999999999999999988763  2234444444444333 22111    223344433321  112334555666


Q ss_pred             HHHHHHHhhcCCCCCCCcCCCCCCccHHHHHHHHhhc--CC---C-CCCHHHHHHHHHHHhhccccchHHHHHHHHHHHh
Q 009887          263 FDRIFESLLRPGQTGQDRNEGKSSKDFLQTLLELQQQ--GD---Y-SLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELL  336 (523)
Q Consensus       263 l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~---~-~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~  336 (523)
                      +.+++...++.|.+     .+..+.|+++.+++.+.+  .+   . .+|.+|++++++.|++||.||||++|++++|+||
T Consensus       248 ~~~~v~~~v~~R~~-----~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA  322 (499)
T KOG0158|consen  248 FRKLVNSRVEQREK-----ENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELA  322 (499)
T ss_pred             HHHHHHHHHHHHHh-----cCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh
Confidence            67777777777633     336778999999998853  11   1 4999999999999999999999999999999999


Q ss_pred             hChHHHHHHHHHHHHhcCCCCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccC-CcccCCCCEEEEechh
Q 009887          337 HKPELMRKARNELEQVVAPDSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLS-GYTIPKGSTIFINAWA  415 (523)
Q Consensus       337 ~~Pe~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~-g~~ip~g~~v~~~~~~  415 (523)
                      +||++|+|||+||+++..+...+++|.+.+|+||++||+||||+||+++. ..|.+++|++++ ++.||+|+.|.+++++
T Consensus       323 ~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~a  401 (499)
T KOG0158|consen  323 KNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYA  401 (499)
T ss_pred             cChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeeccc
Confidence            99999999999999997765559999999999999999999999999999 679999999999 9999999999999999


Q ss_pred             hccCCCCCCCCCCCCCCcccccccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccc
Q 009887          416 IQTNPEVWENPQDFRPDRFLEDVKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSD  495 (523)
Q Consensus       416 ~~~d~~~~~dp~~F~PeRwl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~  495 (523)
                      +||||++||||++|+||||.++..+   ..++.+|+|||.|||.|+|.+||++|+|+.|++||++|++++.+....+  .
T Consensus       402 lH~Dp~~~p~Pe~F~PERF~~~~~~---~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~--~  476 (499)
T KOG0158|consen  402 LHHDPEYWPEPEKFKPERFEEENNK---SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIP--L  476 (499)
T ss_pred             ccCCcccCCCcccCCCccCCCCccc---ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCc--c
Confidence            9999999999999999999975432   3466799999999999999999999999999999999999987732222  3


Q ss_pred             cc---cceeccCCceeeeeccCC
Q 009887          496 KL---LMALKKSEPLAVIPTPRS  515 (523)
Q Consensus       496 ~~---~~~~~~~~~~~v~~~~r~  515 (523)
                      ..   +.++.|+.++++++++|+
T Consensus       477 ~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  477 EGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             cCCccceeeecCCceEEEEEeCC
Confidence            33   788899999999999984


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.4e-79  Score=616.17  Aligned_cols=466  Identities=26%  Similarity=0.507  Sum_probs=363.7

Q ss_pred             CCCCCCCCCCCCCCccccccccC-c-cHHHHHHHHHHHhC-CeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCchH
Q 009887           49 RSTPPLPPGPRPLPLVGNFLSLE-P-NLHHYFGKLSQIYG-PIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLPA  125 (523)
Q Consensus        49 ~~~~~~~pgP~~~p~~G~~~~~~-~-~~~~~~~~~~~kyG-~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~~  125 (523)
                      +++.+.||||.++|++||++.+. . ..+.++.++.++|| +++++++|+.++|+|+||+++++++.++...|++++...
T Consensus        53 ~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         53 KKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            44567899999999999998873 2 34778999999999 899999999999999999999999999888888887533


Q ss_pred             HHHHhhcC---CccccCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc--cCCCceehHHHHHHHHHHHH
Q 009887          126 AASVLAYG---GMSIAASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG--RVGSPIKLRELMFLTFLDVA  200 (523)
Q Consensus       126 ~~~~~~~~---~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~~i  200 (523)
                      ....++.+   +....+|+.|+++|+++.+++++...++.+.+.+.+++..+++.+.+  .+++++|+.+.+.+++++++
T Consensus       133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi  212 (543)
T PLN02971        133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAI  212 (543)
T ss_pred             chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHH
Confidence            32223222   12333899999999999767777777778888888888888887754  34568999999999999999


Q ss_pred             HHHHhcccccCCC---CchHHHHHHHHHHHHHHHhC---CCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcCC
Q 009887          201 TRMLWGASVRGED---WDPIAIQFRELIEAMFQLLG---SGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRPG  274 (523)
Q Consensus       201 ~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  274 (523)
                      ++++||.++...+   .+....+..+.++..+....   ...+.+++|++.++...+..+......+.+.+++.+.++++
T Consensus       213 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  292 (543)
T PLN02971        213 KRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDER  292 (543)
T ss_pred             HHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999874321   01111122233333332221   12244566766554222223445556666777777777665


Q ss_pred             CCCCCcCCCCCCccHHHHHHHHhhcCCC-CCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhc
Q 009887          275 QTGQDRNEGKSSKDFLQTLLELQQQGDY-SLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVV  353 (523)
Q Consensus       275 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~-~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~  353 (523)
                      ++....+......|+++.+++..++++. .++++++.+++..+++||+|||+++++|++++|+.|||+|+|+|+||++++
T Consensus       293 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~  372 (543)
T PLN02971        293 IKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVV  372 (543)
T ss_pred             HHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence            4311111112346999999986544322 499999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCCCCCCc
Q 009887          354 APDSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQDFRPDR  433 (523)
Q Consensus       354 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeR  433 (523)
                      |.++.++++++.+||||+|||+|+||++|++|+.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|||
T Consensus       373 g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeR  452 (543)
T PLN02971        373 GKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPER  452 (543)
T ss_pred             CCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCccc
Confidence            87788999999999999999999999999999878899999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCC-CCCccccccceeccCCceeeeec
Q 009887          434 FLEDVKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEET-KLDLSDKLLMALKKSEPLAVIPT  512 (523)
Q Consensus       434 wl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~  512 (523)
                      |+++..+......+..|+|||+|+|.|+|++||++|+++++++|+++|+|++.++. ..+.....+ ++..+.++.+.++
T Consensus       453 fl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  531 (543)
T PLN02971        453 HLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPLVMVGE  531 (543)
T ss_pred             CCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccceeeee
Confidence            99743211111234579999999999999999999999999999999999987653 444444445 5556668999999


Q ss_pred             cCC
Q 009887          513 PRS  515 (523)
Q Consensus       513 ~r~  515 (523)
                      ||-
T Consensus       532 ~~~  534 (543)
T PLN02971        532 LRL  534 (543)
T ss_pred             ecC
Confidence            993


No 4  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.2e-78  Score=607.67  Aligned_cols=466  Identities=35%  Similarity=0.679  Sum_probs=379.0

Q ss_pred             CCCCCCCCCCCCCCccccccccCccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCchHHHH
Q 009887           49 RSTPPLPPGPRPLPLVGNFLSLEPNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLPAAAS  128 (523)
Q Consensus        49 ~~~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~  128 (523)
                      +++.+.||||.++|++||++.+..+++.++.+|+++||++|++++|+.++++++||+++++++.++...|.+++......
T Consensus        30 ~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~  109 (517)
T PLN02687         30 KHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAE  109 (517)
T ss_pred             CCCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchh
Confidence            34446799999999999998887789999999999999999999999999999999999999998777788776543332


Q ss_pred             Hhhc--CC-ccccCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc-cCCCceehHHHHHHHHHHHHHHHH
Q 009887          129 VLAY--GG-MSIAASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG-RVGSPIKLRELMFLTFLDVATRML  204 (523)
Q Consensus       129 ~~~~--~~-~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~-~~~~~vd~~~~~~~~~~~~i~~~~  204 (523)
                      .+..  ++ ....+|+.|+++|+.+.+++|+..+++.+.+.+.++++++++.|.. .+++++|+.+++..+++|+++..+
T Consensus       110 ~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~  189 (517)
T PLN02687        110 HMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAM  189 (517)
T ss_pred             hhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence            2221  22 2223799999999999757899999999999999999999999975 356789999999999999999999


Q ss_pred             hcccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCCcCCCC
Q 009887          205 WGASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQDRNEGK  284 (523)
Q Consensus       205 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~  284 (523)
                      ||.++...+.+.....+.+.+..+...........++|++.++...+..++..+..+.+.+++.+.++++++.... +..
T Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-~~~  268 (517)
T PLN02687        190 VGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT-GSE  268 (517)
T ss_pred             hCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cCc
Confidence            9999865432334456667766666554433333566765544333334456666777888888888776542211 113


Q ss_pred             CCccHHHHHHHHhhc-----CCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCcc
Q 009887          285 SSKDFLQTLLELQQQ-----GDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAPDSVV  359 (523)
Q Consensus       285 ~~~d~l~~ll~~~~~-----~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~~~~  359 (523)
                      ...|+++.+++..++     ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++||+++++.++.+
T Consensus       269 ~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  348 (517)
T PLN02687        269 EHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLV  348 (517)
T ss_pred             ccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCC
Confidence            456999999987543     234699999999999999999999999999999999999999999999999999877788


Q ss_pred             cccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCCCCCCccccccc
Q 009887          360 EEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQDFRPDRFLEDVK  439 (523)
Q Consensus       360 ~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeRwl~~~~  439 (523)
                      +.+++++||||+|||+||||++|+++..++|++.+|++++||.||+||.|.++.+.+||||++|+||++|+||||+++..
T Consensus       349 ~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~  428 (517)
T PLN02687        349 SESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGE  428 (517)
T ss_pred             CHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCC
Confidence            99999999999999999999999999877899999999999999999999999999999999999999999999997432


Q ss_pred             CC--CCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCC---CCccccccceeccCCceeeeeccC
Q 009887          440 IG--DFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETK---LDLSDKLLMALKKSEPLAVIPTPR  514 (523)
Q Consensus       440 ~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~r  514 (523)
                      ..  .....+..|+|||+|+|.|+|++||++|+++++++|+++|+|++.++..   .+.....++...+..+++++++||
T Consensus       429 ~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  508 (517)
T PLN02687        429 HAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPR  508 (517)
T ss_pred             ccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccC
Confidence            11  1112345899999999999999999999999999999999999876532   222233566667778999999999


Q ss_pred             C
Q 009887          515 S  515 (523)
Q Consensus       515 ~  515 (523)
                      .
T Consensus       509 ~  509 (517)
T PLN02687        509 L  509 (517)
T ss_pred             C
Confidence            3


No 5  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.7e-78  Score=606.20  Aligned_cols=463  Identities=32%  Similarity=0.596  Sum_probs=374.7

Q ss_pred             CCCCCCCCCCCCCCCccccccccC-ccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCchHH
Q 009887           48 TRSTPPLPPGPRPLPLVGNFLSLE-PNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLPAA  126 (523)
Q Consensus        48 ~~~~~~~~pgP~~~p~~G~~~~~~-~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~  126 (523)
                      .+++.+.||||.++|++||+..+. .+++.++.+++++||++|++++|+.++|+++||+++++|+.++...|..++....
T Consensus        23 ~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~  102 (499)
T PLN03234         23 TKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKG  102 (499)
T ss_pred             cCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            355667899999999999998885 4788899999999999999999999999999999999999988777887765433


Q ss_pred             HHHhh--cCCcccc-CCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc--cCCCceehHHHHHHHHHHHHH
Q 009887          127 ASVLA--YGGMSIA-ASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG--RVGSPIKLRELMFLTFLDVAT  201 (523)
Q Consensus       127 ~~~~~--~~~~~~~-~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~~i~  201 (523)
                      .....  +...+.. .++.|+++|+.+..++|++++++.+.+.+.+.++++++.|..  .+++++|+.+.+..+++|+++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~  182 (499)
T PLN03234        103 QQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVC  182 (499)
T ss_pred             hhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHH
Confidence            22222  2222222 668999999986558999999999999999999999999965  456789999999999999999


Q ss_pred             HHHhcccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhccccccc-ccchhHHHHHHHHHHHHHHHHhhcCCCCCCCc
Q 009887          202 RMLWGASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFD-LQGHQSKAKKLTARFDRIFESLLRPGQTGQDR  280 (523)
Q Consensus       202 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  280 (523)
                      +++||.+++..  .....++.+.+...............+|++..+. ..+..++..++.+.+.+++.+.++++.+... 
T Consensus       183 ~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  259 (499)
T PLN03234        183 RQAFGKRYNEY--GTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNR-  259 (499)
T ss_pred             HHHhCCccccc--chhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Confidence            99999988754  2233455555555444433333444556543321 1223456778888888888888876543211 


Q ss_pred             CCCCCCccHHHHHHHHhhcCC--CCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCc
Q 009887          281 NEGKSSKDFLQTLLELQQQGD--YSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAPDSV  358 (523)
Q Consensus       281 ~~~~~~~d~l~~ll~~~~~~~--~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~~~  358 (523)
                       ......|+++.+++..++++  ..++++++.+++..+++||+|||+++++|++++|++||++|+|+|+|+++++++.+.
T Consensus       260 -~~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~  338 (499)
T PLN03234        260 -PKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGY  338 (499)
T ss_pred             -cCCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCC
Confidence             11235689999987654432  358999999999999999999999999999999999999999999999999987777


Q ss_pred             ccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCC-CCCCCCCCCccccc
Q 009887          359 VEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVW-ENPQDFRPDRFLED  437 (523)
Q Consensus       359 ~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~PeRwl~~  437 (523)
                      ++++++++||||+|||+||||++|++++..+|.+.+|++++||.||+||.|.++++.+||||++| +||++||||||+++
T Consensus       339 ~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~  418 (499)
T PLN03234        339 VSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKE  418 (499)
T ss_pred             CCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCC
Confidence            89999999999999999999999999987789999999999999999999999999999999999 89999999999975


Q ss_pred             ccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCC---CCCccccccceeccCCceeeeeccC
Q 009887          438 VKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEET---KLDLSDKLLMALKKSEPLAVIPTPR  514 (523)
Q Consensus       438 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~r  514 (523)
                      ..+......+..|+|||+|+|+|+|+++|++|++++++.|+++|+|++.++.   .+..+...++...+++.+.++.++|
T Consensus       419 ~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        419 HKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence            3222222345689999999999999999999999999999999999987652   2333334677777888899888876


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=3.7e-78  Score=600.29  Aligned_cols=482  Identities=29%  Similarity=0.589  Sum_probs=383.9

Q ss_pred             HHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCccccccccCccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHH
Q 009887           31 LAATFAISCYAWLIKKPTRSTPPLPPGPRPLPLVGNFLSLEPNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQV  110 (523)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~i  110 (523)
                      +..++.++..+++.+.....+.+.||||+++|++|+++.++.+++.++.+++++||+||++++|+.+.|+|+||++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~v   88 (504)
T PLN00110          9 AATLLFFITRFFIRSLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAF   88 (504)
T ss_pred             HHHHHHHHHHHHHHHHhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHH
Confidence            33333333344444455566667899999999999998887778999999999999999999999999999999999999


Q ss_pred             HHhcCccccCCCchHHHH-Hhhc-C-CccccCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc--cCCCc
Q 009887          111 LKEHDVVFANRDLPAAAS-VLAY-G-GMSIAASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG--RVGSP  185 (523)
Q Consensus       111 l~~~~~~f~~~~~~~~~~-~~~~-~-~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~~~~~  185 (523)
                      +.++...|+.++...... ...+ + +....+|+.|+++|+.+..+.|+..+++.+.+.+.+++..+++.+.+  .+|++
T Consensus        89 l~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~  168 (504)
T PLN00110         89 LKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEP  168 (504)
T ss_pred             HHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCc
Confidence            998877788776543222 2222 2 22223799999999999756899999999999999999999988865  45778


Q ss_pred             eehHHHHHHHHHHHHHHHHhcccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHH
Q 009887          186 IKLRELMFLTFLDVATRMLWGASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDR  265 (523)
Q Consensus       186 vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~  265 (523)
                      +|+.+++..+++|+++.++||.++.... .....++.+++..............++|++.++...+..++..+..+.+.+
T Consensus       169 ~~~~~~~~~~~~~vi~~~~fg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~  247 (504)
T PLN00110        169 VVVPEMLTFSMANMIGQVILSRRVFETK-GSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDK  247 (504)
T ss_pred             EeHHHHHHHHHHHHHHHHHhCCcccccC-chhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHH
Confidence            9999999999999999999999873221 223355667766665544433344566765544222233455556677777


Q ss_pred             HHHHhhcCCCCCCCcCCCCCCccHHHHHHHHhhc-CCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHH
Q 009887          266 IFESLLRPGQTGQDRNEGKSSKDFLQTLLELQQQ-GDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRK  344 (523)
Q Consensus       266 ~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~-~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~  344 (523)
                      ++.+.++++++...  ......|+++.+++..++ ++..++++++.+++..+++||+|||+++++|++++|++||++|+|
T Consensus       248 ~~~~~i~~~~~~~~--~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~k  325 (504)
T PLN00110        248 LLTRMIEEHTASAH--ERKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKR  325 (504)
T ss_pred             HHHHHHHHHHhhcc--ccccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHH
Confidence            77777765543211  112346899999976533 234699999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCC
Q 009887          345 ARNELEQVVAPDSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWE  424 (523)
Q Consensus       345 lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~  424 (523)
                      +++|++++++.++.++++++++||||+|||+||||++|++++..+|.+.+|++++||.||+||.|.++++.+||||++|+
T Consensus       326 l~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~  405 (504)
T PLN00110        326 AHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWE  405 (504)
T ss_pred             HHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcC
Confidence            99999999987777899999999999999999999999999877899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccccCC-CCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceecc
Q 009887          425 NPQDFRPDRFLEDVKIG-DFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKK  503 (523)
Q Consensus       425 dp~~F~PeRwl~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  503 (523)
                      ||++|+||||+++.... ........|+|||+|+|.|+|++||++|++++++.|+++|+|++.++.+.+.....+.++.+
T Consensus       406 dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  485 (504)
T PLN00110        406 NPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQK  485 (504)
T ss_pred             CcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCccccccccccc
Confidence            99999999999642211 11112347999999999999999999999999999999999998776554433345777889


Q ss_pred             CCceeeeeccCC
Q 009887          504 SEPLAVIPTPRS  515 (523)
Q Consensus       504 ~~~~~v~~~~r~  515 (523)
                      +.++++++++|.
T Consensus       486 ~~~~~~~~~~r~  497 (504)
T PLN00110        486 AVPLSAMVTPRL  497 (504)
T ss_pred             CCCceEeeccCC
Confidence            999999999994


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2.9e-78  Score=604.76  Aligned_cols=460  Identities=33%  Similarity=0.644  Sum_probs=363.2

Q ss_pred             CCCCCCCCCCCCCCccccccccCccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCchHHHH
Q 009887           49 RSTPPLPPGPRPLPLVGNFLSLEPNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLPAAAS  128 (523)
Q Consensus        49 ~~~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~  128 (523)
                      +++.+.||||.++|++|+++.+....+.++.+|+++||++|++++|+.++|+|+||+++++++.++...|+.++......
T Consensus        32 ~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~  111 (516)
T PLN02183         32 RRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAIS  111 (516)
T ss_pred             cCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchh
Confidence            44457899999999999998876667788999999999999999999999999999999999998877787776543322


Q ss_pred             Hhhc---CCccccCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHHHHh
Q 009887          129 VLAY---GGMSIAASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSGRVGSPIKLRELMFLTFLDVATRMLW  205 (523)
Q Consensus       129 ~~~~---~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~i~~~~f  205 (523)
                      ...+   ++....+|+.|+++|+.+..++|+...++.+.+. .+++..+++.|....++++|+.+++..+++|++++++|
T Consensus       112 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~f  190 (516)
T PLN02183        112 YLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYRAAF  190 (516)
T ss_pred             ccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHhHhh
Confidence            2221   2233348999999999965589999999988886 46789999999654577899999999999999999999


Q ss_pred             cccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCCc----C
Q 009887          206 GASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQDR----N  281 (523)
Q Consensus       206 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~----~  281 (523)
                      |.+++..     ..++.+.+...............+|++.++.+....++..+..+.+.+++.+.++++.+....    +
T Consensus       191 G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  265 (516)
T PLN02183        191 GSSSNEG-----QDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADN  265 (516)
T ss_pred             cCcccch-----HHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence            9876542     134555555555544443445566766544222234455666667777666666544321100    0


Q ss_pred             -CCCCCccHHHHHHHHhhcC-----------CCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 009887          282 -EGKSSKDFLQTLLELQQQG-----------DYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNEL  349 (523)
Q Consensus       282 -~~~~~~d~l~~ll~~~~~~-----------~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei  349 (523)
                       +.....|+++.+++...++           +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+
T Consensus       266 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei  345 (516)
T PLN02183        266 DSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQEL  345 (516)
T ss_pred             ccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence             1123468999999854321           1358999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCCC
Q 009887          350 EQVVAPDSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQDF  429 (523)
Q Consensus       350 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F  429 (523)
                      +++++.++.++++++++||||+|||+||||++|++|+. .|.+.+|++++||.|||||.|.++.+++||||++|+||++|
T Consensus       346 ~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F  424 (516)
T PLN02183        346 ADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTF  424 (516)
T ss_pred             HHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCcccc
Confidence            99998666789999999999999999999999999986 49999999999999999999999999999999999999999


Q ss_pred             CCCcccccccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCC---CCccccccceeccCCc
Q 009887          430 RPDRFLEDVKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETK---LDLSDKLLMALKKSEP  506 (523)
Q Consensus       430 ~PeRwl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~  506 (523)
                      +||||+++... ........|+|||+|+|.|+|++||++|+++++++++++|+|++.++..   .+.....+.+..+..+
T Consensus       425 ~PeRfl~~~~~-~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (516)
T PLN02183        425 KPSRFLKPGVP-DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATR  503 (516)
T ss_pred             CchhhCCCCCc-cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCC
Confidence            99999974321 1112445899999999999999999999999999999999999876532   2222233544445668


Q ss_pred             eeeeeccCCC
Q 009887          507 LAVIPTPRSL  516 (523)
Q Consensus       507 ~~v~~~~r~~  516 (523)
                      +.+.+++|-+
T Consensus       504 ~~~~~~~r~~  513 (516)
T PLN02183        504 LVAVPTYRLQ  513 (516)
T ss_pred             cEEEeecCCC
Confidence            8999999944


No 8  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.8e-77  Score=600.63  Aligned_cols=482  Identities=31%  Similarity=0.592  Sum_probs=381.5

Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCCCCCCCCCccccccccCccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHH
Q 009887           33 ATFAISCYAWLIKKPTRSTPPLPPGPRPLPLVGNFLSLEPNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLK  112 (523)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~  112 (523)
                      .++.++++.++. .+.+++.+.||||.++|++||+..++.+++.++.+++++||++|++++++.+.++++||+++++++.
T Consensus        13 ~~~~~~~~~~~~-~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~   91 (514)
T PLN03112         13 LIFNVLIWRWLN-ASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILL   91 (514)
T ss_pred             HHHHHHHHHHcc-ccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHH
Confidence            333334444444 4556677889999999999999988878999999999999999999999999999999999999998


Q ss_pred             hcCccccCCCchHHHHH-hhcCCc--cccCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc--cCCCcee
Q 009887          113 EHDVVFANRDLPAAASV-LAYGGM--SIAASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG--RVGSPIK  187 (523)
Q Consensus       113 ~~~~~f~~~~~~~~~~~-~~~~~~--~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~~~~~vd  187 (523)
                      ++...|++++....... ..+.+.  ...+|+.|+++|+.+.+++|+..+++.+.+.+.+.++.+++.+.+  .+++++|
T Consensus        92 ~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd  171 (514)
T PLN03112         92 RQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVN  171 (514)
T ss_pred             hCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeee
Confidence            87777887665322211 122222  223899999999997667899999999999999999999988754  4567899


Q ss_pred             hHHHHHHHHHHHHHHHHhcccccCCCC--chHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHH
Q 009887          188 LRELMFLTFLDVATRMLWGASVRGEDW--DPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDR  265 (523)
Q Consensus       188 ~~~~~~~~~~~~i~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~  265 (523)
                      +.+.+..++++++++++||.++.....  ......+.+++..+...........++|.+.++.+.+..++..+..+.+.+
T Consensus       172 ~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  251 (514)
T PLN03112        172 LREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDE  251 (514)
T ss_pred             HHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHH
Confidence            999999999999999999998754321  123345666666655443333344456765544333334556666777777


Q ss_pred             HHHHhhcCCCCCCCc-CCCCCCccHHHHHHHHhhcCC-CCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHH
Q 009887          266 IFESLLRPGQTGQDR-NEGKSSKDFLQTLLELQQQGD-YSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMR  343 (523)
Q Consensus       266 ~~~~~i~~~~~~~~~-~~~~~~~d~l~~ll~~~~~~~-~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~  343 (523)
                      +++..++++++.... .......|+++.++++..+++ ..++++++.+++..+++||+|||+++++|++++|++||++|+
T Consensus       252 ~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~  331 (514)
T PLN03112        252 FHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLR  331 (514)
T ss_pred             HHHHHHHHHHHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHH
Confidence            777777654432111 011234699999998654432 358999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCC
Q 009887          344 KARNELEQVVAPDSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVW  423 (523)
Q Consensus       344 ~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~  423 (523)
                      |+++||+++++.++.++++++++||||+|||+||+|++|++++..+|++.+|++++||.||+||.|.++++++||||++|
T Consensus       332 kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~  411 (514)
T PLN03112        332 KIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIW  411 (514)
T ss_pred             HHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccC
Confidence            99999999998777889999999999999999999999999987789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccccCC-C-CCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCC---CCCcccccc
Q 009887          424 ENPQDFRPDRFLEDVKIG-D-FQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEET---KLDLSDKLL  498 (523)
Q Consensus       424 ~dp~~F~PeRwl~~~~~~-~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~  498 (523)
                      +||++|+||||.++.... . .......|+|||+|+|.|||++||++|++++++.|+++|+|++.++.   .++.....+
T Consensus       412 ~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  491 (514)
T PLN03112        412 DDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYG  491 (514)
T ss_pred             CChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccC
Confidence            999999999976532111 1 11234579999999999999999999999999999999999987542   233333456


Q ss_pred             ceeccCCceeeeeccCC
Q 009887          499 MALKKSEPLAVIPTPRS  515 (523)
Q Consensus       499 ~~~~~~~~~~v~~~~r~  515 (523)
                      +.+.++.++++.++||.
T Consensus       492 ~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        492 MTMPKAKPLRAVATPRL  508 (514)
T ss_pred             cccccCCCeEEEeecCC
Confidence            77778889999999995


No 9  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.2e-77  Score=597.59  Aligned_cols=457  Identities=23%  Similarity=0.365  Sum_probs=363.5

Q ss_pred             hhCCCCCCCCCCCCCCCCCccccccccCccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCc
Q 009887           44 IKKPTRSTPPLPPGPRPLPLVGNFLSLEPNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDL  123 (523)
Q Consensus        44 ~~~~~~~~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~  123 (523)
                      +++..+.+.+.+|||.++|++||+..+..+++..+.+++++||++|++++|+.+.|+++||+++++++.++...|..++.
T Consensus        20 ~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~   99 (482)
T PTZ00404         20 YKKYKKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPK   99 (482)
T ss_pred             HHHhhhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCC
Confidence            33444666788999999999999998877899999999999999999999999999999999999999887656766554


Q ss_pred             hHHH-HHhhcCCccccCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc--cCCCceehHHHHHHHHHHHH
Q 009887          124 PAAA-SVLAYGGMSIAASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG--RVGSPIKLRELMFLTFLDVA  200 (523)
Q Consensus       124 ~~~~-~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~~i  200 (523)
                      .... ....+.+....+|+.|+++|+++. +.|+..+++.+.+.+.+.+.++++.|.+  ..++.+|+.+++..+++|++
T Consensus       100 ~~~~~~~~~~~~l~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi  178 (482)
T PTZ00404        100 IPSIKHGTFYHGIVTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAM  178 (482)
T ss_pred             cceeeeeccCCceeccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHH
Confidence            3322 112244555559999999999996 9999999999999999999999999865  35677999999999999999


Q ss_pred             HHHHhcccccCCCC--chHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcCCCCCC
Q 009887          201 TRMLWGASVRGEDW--DPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQ  278 (523)
Q Consensus       201 ~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  278 (523)
                      +.++||.+++..+.  .+....+.+.+...+...........++++... .........+..+.+.+++.+.++++++..
T Consensus       179 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  257 (482)
T PTZ00404        179 FKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKTI  257 (482)
T ss_pred             HHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            99999998865321  122345666666655544433233333332211 011112234456667777777665543321


Q ss_pred             CcCCCCCCccHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCc
Q 009887          279 DRNEGKSSKDFLQTLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAPDSV  358 (523)
Q Consensus       279 ~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~~~  358 (523)
                         +.....|+++.++++..+. ...+.+++.+++..+++||+|||+++++|++++|++||++|+|+++||+++++++..
T Consensus       258 ---~~~~~~dll~~ll~~~~~~-~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~  333 (482)
T PTZ00404        258 ---DPEVPRDLLDLLIKEYGTN-TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNK  333 (482)
T ss_pred             ---CCCCcccHHHHHHHHhccC-CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCC
Confidence               1123569999999875321 112334588999999999999999999999999999999999999999999987667


Q ss_pred             ccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCccc-CCcccCCCCEEEEechhhccCCCCCCCCCCCCCCccccc
Q 009887          359 VEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNL-SGYTIPKGSTIFINAWAIQTNPEVWENPQDFRPDRFLED  437 (523)
Q Consensus       359 ~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeRwl~~  437 (523)
                      ++++++++||||+|||+||||++|++++.++|.+.+|+++ +||.||+||.|.++.+++||||++|+||++|+||||++.
T Consensus       334 ~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~  413 (482)
T PTZ00404        334 VLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNP  413 (482)
T ss_pred             CCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCC
Confidence            8999999999999999999999999997678999999999 999999999999999999999999999999999999863


Q ss_pred             ccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceeeeeccC
Q 009887          438 VKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAVIPTPR  514 (523)
Q Consensus       438 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  514 (523)
                      .       .+..|+|||+|+|.|+|++||++|++++++.|+++|+|++.++++.+.....++++. +.+++|.+++|
T Consensus       414 ~-------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        414 D-------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             C-------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence            1       345899999999999999999999999999999999999876655433333456555 66799999987


No 10 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=6.2e-77  Score=595.63  Aligned_cols=463  Identities=30%  Similarity=0.551  Sum_probs=355.0

Q ss_pred             CCCCCCCCCCCCCCccccccccCcc-HHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCchHHH
Q 009887           49 RSTPPLPPGPRPLPLVGNFLSLEPN-LHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLPAAA  127 (523)
Q Consensus        49 ~~~~~~~pgP~~~p~~G~~~~~~~~-~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~  127 (523)
                      .++.+.||||+++|++|++..+..+ .+..+.+++++||+||++++|+.+.|+|+||+.+++++.++...|..++.....
T Consensus        26 ~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~  105 (503)
T PLN02394         26 GKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVF  105 (503)
T ss_pred             cCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchH
Confidence            3456789999999999999888544 578999999999999999999999999999999999998877677766544443


Q ss_pred             HHhhcCC---ccccCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc---cCCCceehHHHHHHHHHHHHH
Q 009887          128 SVLAYGG---MSIAASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG---RVGSPIKLRELMFLTFLDVAT  201 (523)
Q Consensus       128 ~~~~~~~---~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~---~~~~~vd~~~~~~~~~~~~i~  201 (523)
                      ..+.+.+   ....+|+.|+++|+.+..++|+.+.++.+.+.+.++++++++.|..   ..++.+|+.+++..+++|+++
T Consensus       106 ~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~  185 (503)
T PLN02394        106 DIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMY  185 (503)
T ss_pred             hHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHH
Confidence            4443322   2333799999999998668999999999999999999999999875   124569999999999999999


Q ss_pred             HHHhcccccCCCCchHHHHHHHHHHHHHHHhCC--CCcchhhcccccccccchhHHHHHHHHHHHH-HHHHhhcCCCCCC
Q 009887          202 RMLWGASVRGEDWDPIAIQFRELIEAMFQLLGS--GGLSDLFPLLARFDLQGHQSKAKKLTARFDR-IFESLLRPGQTGQ  278 (523)
Q Consensus       202 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~-~~~~~i~~~~~~~  278 (523)
                      +++||.+++..+ +.....+.............  ..+..++|++.... ....+........... +....++++++..
T Consensus       186 ~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (503)
T PLN02394        186 RMMFDRRFESED-DPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDERKKLM  263 (503)
T ss_pred             HHHhCCCccccc-chhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999987542 22223333333333222221  11223445433221 1111122222222122 2222333332210


Q ss_pred             C--cCCCCCCccHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCC
Q 009887          279 D--RNEGKSSKDFLQTLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAPD  356 (523)
Q Consensus       279 ~--~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~  356 (523)
                      .  ..+.....|+++.|+++.++  ..++++++..++..+++||+||||++++|++++|++||++|+|+|+||+++++.+
T Consensus       264 ~~~~~~~~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~  341 (503)
T PLN02394        264 SAKGMDKEGLKCAIDHILEAQKK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPG  341 (503)
T ss_pred             hhccCCcchhhhHHHHHHhcccc--CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC
Confidence            0  00112346899999987654  3489999999999999999999999999999999999999999999999999876


Q ss_pred             CcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCCCCCCcccc
Q 009887          357 SVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQDFRPDRFLE  436 (523)
Q Consensus       357 ~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeRwl~  436 (523)
                      +.++++++++||||+|||+||||++|++++..+|.+.+|++++||.||+||.|.++++.+||||++|+||++|+||||++
T Consensus       342 ~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~  421 (503)
T PLN02394        342 NQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLE  421 (503)
T ss_pred             CCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCC
Confidence            67899999999999999999999999999988899999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCC-CCccccc-cceeccCCceeeeeccC
Q 009887          437 DVKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETK-LDLSDKL-LMALKKSEPLAVIPTPR  514 (523)
Q Consensus       437 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~-~~~~~~~~~~~v~~~~r  514 (523)
                      +............|+|||+|+|+|+|++||++|++++++.++++|+|++.++.+ .+..... +..+..+.++.++++||
T Consensus       422 ~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  501 (503)
T PLN02394        422 EEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPR  501 (503)
T ss_pred             CCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecC
Confidence            432111122345899999999999999999999999999999999999876653 3333223 35555777999999999


Q ss_pred             C
Q 009887          515 S  515 (523)
Q Consensus       515 ~  515 (523)
                      +
T Consensus       502 ~  502 (503)
T PLN02394        502 S  502 (503)
T ss_pred             C
Confidence            6


No 11 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.1e-76  Score=591.82  Aligned_cols=470  Identities=25%  Similarity=0.457  Sum_probs=367.5

Q ss_pred             HhhCCCCCCCCCCCCCCCCCccccccccC---ccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCcccc
Q 009887           43 LIKKPTRSTPPLPPGPRPLPLVGNFLSLE---PNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFA  119 (523)
Q Consensus        43 ~~~~~~~~~~~~~pgP~~~p~~G~~~~~~---~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~  119 (523)
                      ......++..+.||||+++|++||+..+.   .+++..+.+++++||++|++++|+.+.|+++||+++++++.++...|+
T Consensus        25 ~~~~~~~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~  104 (519)
T PLN00168         25 HGGRGGKKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALA  104 (519)
T ss_pred             hhccCCCCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccc
Confidence            34344455667899999999999987653   457889999999999999999999999999999999999998887888


Q ss_pred             CCCchHHHHHhhcCC-ccc--cCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc--cCCCceehHHHHHH
Q 009887          120 NRDLPAAASVLAYGG-MSI--AASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG--RVGSPIKLRELMFL  194 (523)
Q Consensus       120 ~~~~~~~~~~~~~~~-~~~--~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~  194 (523)
                      .++.......++.++ ...  .+|+.|+++||.+..++|+..+++.+.+.+.+.++.+++.|.+  .+++.+|+.+.+..
T Consensus       105 ~rp~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~  184 (519)
T PLN00168        105 DRPAVASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQY  184 (519)
T ss_pred             cCCcccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHH
Confidence            776543323333222 222  3799999999865569999999999999999999999999975  23456899999999


Q ss_pred             HHHHHHHHHHhcccccCCCCchHHHHHHHHHHHHHHHh-CCCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcC
Q 009887          195 TFLDVATRMLWGASVRGEDWDPIAIQFRELIEAMFQLL-GSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRP  273 (523)
Q Consensus       195 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  273 (523)
                      ++.++++.++||.+++..    ....+........... ....+...+|.+.+.......++..+..+.+.+++...+++
T Consensus       185 ~~~~ii~~~~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  260 (519)
T PLN00168        185 AMFCLLVLMCFGERLDEP----AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDA  260 (519)
T ss_pred             HHHHHHHHHHcCCCcChh----hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999987532    1223333333322222 22234455665433222222344556677777777777765


Q ss_pred             CCCCCC---c-CC-C----CCCccHHHHHHHHhh--cCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHH
Q 009887          274 GQTGQD---R-NE-G----KSSKDFLQTLLELQQ--QGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELM  342 (523)
Q Consensus       274 ~~~~~~---~-~~-~----~~~~d~l~~ll~~~~--~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~  342 (523)
                      +++...   . +. .    ....|+++.|++...  +++..++++++.+++..+++||+|||+++++|++++|++||++|
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q  340 (519)
T PLN00168        261 RREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQ  340 (519)
T ss_pred             HHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHH
Confidence            543210   0 00 0    114589999997653  22346999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCC-CcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCC
Q 009887          343 RKARNELEQVVAPD-SVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPE  421 (523)
Q Consensus       343 ~~lr~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~  421 (523)
                      +|+++||+++++.+ +.++++++.+||||+|||+||||++|+++...+|.+.+|++++||.|||||.|.++++.+||||+
T Consensus       341 ~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~  420 (519)
T PLN00168        341 SKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDER  420 (519)
T ss_pred             HHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCcc
Confidence            99999999999753 56899999999999999999999999999887899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccccCC--C-CCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccc
Q 009887          422 VWENPQDFRPDRFLEDVKIG--D-FQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLL  498 (523)
Q Consensus       422 ~~~dp~~F~PeRwl~~~~~~--~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~  498 (523)
                      +|+||++|+||||+++..+.  . ....+..|+|||+|+|.|||++||++|++++++.|+++|+|++.++.+.+.....+
T Consensus       421 ~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~  500 (519)
T PLN00168        421 EWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKRE  500 (519)
T ss_pred             ccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhce
Confidence            99999999999999742211  0 11234579999999999999999999999999999999999987654444333345


Q ss_pred             ceeccCCceeeeeccCCC
Q 009887          499 MALKKSEPLAVIPTPRSL  516 (523)
Q Consensus       499 ~~~~~~~~~~v~~~~r~~  516 (523)
                      +++.++.++++++++|+.
T Consensus       501 ~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        501 FTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             eEEeecCCcEEEEEeccC
Confidence            566778889999999964


No 12 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.1e-75  Score=584.75  Aligned_cols=462  Identities=31%  Similarity=0.595  Sum_probs=355.5

Q ss_pred             CCCCCCCCCCCCCCCCCcccccccc-CccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCch
Q 009887           46 KPTRSTPPLPPGPRPLPLVGNFLSL-EPNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLP  124 (523)
Q Consensus        46 ~~~~~~~~~~pgP~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~  124 (523)
                      ...++..+.||||.++|++||++.+ ..+++..+.+|+++||++|++++|+.+.|+++||+++++++.++...|.+++..
T Consensus        22 ~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~  101 (502)
T PLN02966         22 KPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPH  101 (502)
T ss_pred             ccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCC
Confidence            3334555779999999999999888 457899999999999999999999999999999999999999877667655432


Q ss_pred             HHHHHh--hcCCccc-cCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc--cCCCceehHHHHHHHHHHH
Q 009887          125 AAASVL--AYGGMSI-AASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG--RVGSPIKLRELMFLTFLDV  199 (523)
Q Consensus       125 ~~~~~~--~~~~~~~-~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~~  199 (523)
                      ......  +.+.... ..|+.|+++|+.+.+++|+..++..+.+.+.+.+.++++.|.+  .+++++|+.+++..+++|+
T Consensus       102 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dv  181 (502)
T PLN02966        102 RGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSV  181 (502)
T ss_pred             ccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHH
Confidence            221111  1111222 2689999999995569999999999999999999999999975  4566899999999999999


Q ss_pred             HHHHHhcccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhccccccc-ccchhHHHHHHHHHHHHHHHHhhcCCCCCC
Q 009887          200 ATRMLWGASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFD-LQGHQSKAKKLTARFDRIFESLLRPGQTGQ  278 (523)
Q Consensus       200 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  278 (523)
                      ++.++||.+++..+  +....+.+++...........+..++|++..+. ..+..+......+...+++.+.++++.+..
T Consensus       182 i~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  259 (502)
T PLN02966        182 VCRQAFGKKYNEDG--EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPK  259 (502)
T ss_pred             HHHHHhCCccCccc--hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999987542  233455555555554444333444555432221 111112223334444455555444322110


Q ss_pred             CcCCCCCCccHHHHHHHHhhcC--CCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCC
Q 009887          279 DRNEGKSSKDFLQTLLELQQQG--DYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAPD  356 (523)
Q Consensus       279 ~~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~  356 (523)
                      .  ......|+++.+++..+++  +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++||+++++.+
T Consensus       260 ~--~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~  337 (502)
T PLN02966        260 R--VKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEK  337 (502)
T ss_pred             c--cccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccc
Confidence            0  1123468999999776543  24589999999999999999999999999999999999999999999999998743


Q ss_pred             --CcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCC-CCCCCCCCCc
Q 009887          357 --SVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVW-ENPQDFRPDR  433 (523)
Q Consensus       357 --~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~PeR  433 (523)
                        +.++++++++||||+|||+||||++|++++..+|.+.+|++++||.||+||.|.++++.+||||++| +||++|+|||
T Consensus       338 ~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR  417 (502)
T PLN02966        338 GSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPER  417 (502)
T ss_pred             CCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhh
Confidence              3578999999999999999999999999987789999999999999999999999999999999999 9999999999


Q ss_pred             ccccccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCC---CCccccccceeccCCceeee
Q 009887          434 FLEDVKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETK---LDLSDKLLMALKKSEPLAVI  510 (523)
Q Consensus       434 wl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~  510 (523)
                      |+++..  .....+..|+|||+|+|+|+|++||++|++++++.||++|+|++.++.+   ++.+...+....++.+++++
T Consensus       418 wl~~~~--~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (502)
T PLN02966        418 FLEKEV--DFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLV  495 (502)
T ss_pred             hcCCCC--CcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEE
Confidence            996421  1122445899999999999999999999999999999999999876642   22222345555455566655


Q ss_pred             ecc
Q 009887          511 PTP  513 (523)
Q Consensus       511 ~~~  513 (523)
                      .++
T Consensus       496 ~~~  498 (502)
T PLN02966        496 PEK  498 (502)
T ss_pred             EEe
Confidence            544


No 13 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=4.4e-76  Score=580.09  Aligned_cols=452  Identities=27%  Similarity=0.458  Sum_probs=362.4

Q ss_pred             CCCCCCCCCCCCccccccccC---ccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCchH-H
Q 009887           51 TPPLPPGPRPLPLVGNFLSLE---PNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLPA-A  126 (523)
Q Consensus        51 ~~~~~pgP~~~p~~G~~~~~~---~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~~-~  126 (523)
                      +...+|||.++|++|++..+.   .+...++.++..+||++|+.|+||.+.++++||+.+++|+.++.......+.+. .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            556799999999999999883   357788999999999999999999999999999999999975544444444444 6


Q ss_pred             HHHhhcCCccccCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc-cCCCceehHHHHHHHHHHHHHHHHh
Q 009887          127 ASVLAYGGMSIAASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG-RVGSPIKLRELMFLTFLDVATRMLW  205 (523)
Q Consensus       127 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~-~~~~~vd~~~~~~~~~~~~i~~~~f  205 (523)
                      ...+.|.|..+.+|+.|+++|+++. ++|+...++.+...+.+....++..+.. ..++.+|+.+.+.++++|+++.++|
T Consensus       113 ~~~~lG~gll~~~g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~~~  191 (497)
T KOG0157|consen  113 LKPWLGDGLLFSDGEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKTAM  191 (497)
T ss_pred             HHHHhcCccccCCchHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHHhc
Confidence            6667777777778999999999997 9999999999999999988887777765 3344499999999999999999999


Q ss_pred             cccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhc-ccccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCCcCC--
Q 009887          206 GASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFP-LLARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQDRNE--  282 (523)
Q Consensus       206 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~--  282 (523)
                      |...... ..+...++.+++.........   ....| +..++...+..++..++.+.+++.++++|+++++....++  
T Consensus       192 G~~~~~~-~~~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~  267 (497)
T KOG0157|consen  192 GPESLDA-EGPELFEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSG  267 (497)
T ss_pred             CCccccc-cCCcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            9222111 233334555666554443332   11223 3222222225678889999999999999988875221111  


Q ss_pred             -CCCCccHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCc-cc
Q 009887          283 -GKSSKDFLQTLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAPDSV-VE  360 (523)
Q Consensus       283 -~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~~~-~~  360 (523)
                       .....|+++.+....+   ..++++++.+++.+|++||+||||++++|++++|+.||++|+|+++|+++++++... .+
T Consensus       268 ~~~~~~d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~  344 (497)
T KOG0157|consen  268 EEKKRLDFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWE  344 (497)
T ss_pred             ccchhhhHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCC
Confidence             1345678776333222   469999999999999999999999999999999999999999999999999984433 23


Q ss_pred             ccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCccc-CCcccCCCCEEEEechhhccCCCCC-CCCCCCCCCcccccc
Q 009887          361 EFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNL-SGYTIPKGSTIFINAWAIQTNPEVW-ENPQDFRPDRFLEDV  438 (523)
Q Consensus       361 ~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~PeRwl~~~  438 (523)
                      ....++|+||++||+|||||||++|+. .|.+.+|+++ +||.||||+.|.++++++|||+++| +||++||||||+++.
T Consensus       345 ~~~~~~m~yl~~vi~EsLRLyppvp~~-~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~  423 (497)
T KOG0157|consen  345 VEKLDQMKYLEMVIKESLRLYPPVPLV-ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGE  423 (497)
T ss_pred             hhhhhhhHHHHHHHHHHhccCCCCchh-hcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCC
Confidence            333336999999999999999999985 5999999999 5899999999999999999999999 599999999999743


Q ss_pred             cCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceeeeeccCC
Q 009887          439 KIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAVIPTPRS  515 (523)
Q Consensus       439 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  515 (523)
                      ...  ..++.+|+|||+|||.|+|++||++|+|+++++++++|+|+++.+..  .......++++..+++|+++||.
T Consensus       424 ~~~--~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  424 EKA--KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             CcC--CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEEEEecCCeEEEEEeCC
Confidence            221  34567999999999999999999999999999999999999887653  33457889999999999999996


No 14 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.8e-75  Score=580.71  Aligned_cols=442  Identities=19%  Similarity=0.300  Sum_probs=340.0

Q ss_pred             CCCCCCCCCCCCCCCCCcccccccc-C----ccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccC
Q 009887           46 KPTRSTPPLPPGPRPLPLVGNFLSL-E----PNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFAN  120 (523)
Q Consensus        46 ~~~~~~~~~~pgP~~~p~~G~~~~~-~----~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~  120 (523)
                      +..+++.+.||||+++|++||++.+ .    +.++.++.+++++||++|++++|+.++|+++||+++++++.+++..|+.
T Consensus        31 ~~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~  110 (490)
T PLN02500         31 RPKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFEC  110 (490)
T ss_pred             ccccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEe
Confidence            3345556789999999999997654 1    4577889999999999999999999999999999999999988767764


Q ss_pred             CCchHHHHHhhcCCccccCCCcHHHHHHHHHHhhcchhhHHH-hHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHH
Q 009887          121 RDLPAAASVLAYGGMSIAASPEWPKLRQVLVRETMSNTSINA-SSAIRRQAVLRSMKDVSGRVGSPIKLRELMFLTFLDV  199 (523)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~  199 (523)
                      +........+++.+....+|+.|+++|+++. +.|+..+++. +.+.+.+.+..+++.|.  .++.+|+.+.+..+++|+
T Consensus       111 ~~~~~~~~~~g~~~~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~vd~~~~~~~~~~~v  187 (490)
T PLN02500        111 SYPRSIGGILGKWSMLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWK--ENSTFSAQDEAKKFTFNL  187 (490)
T ss_pred             eCchHHHHHhCcccccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhC--CCCCEEehHHHHHHHHHH
Confidence            4322222222222444459999999999997 8999988887 56788888888888874  356799999999999999


Q ss_pred             HHHHHhcccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 009887          200 ATRMLWGASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQD  279 (523)
Q Consensus       200 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  279 (523)
                      +++++||.+.+..    ...++...+.........  ....+|..       ..++..++.+.+.+++.+.++++++...
T Consensus       188 i~~~~fg~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~  254 (490)
T PLN02500        188 MAKHIMSMDPGEE----ETEQLKKEYVTFMKGVVS--APLNFPGT-------AYRKALKSRATILKFIERKMEERIEKLK  254 (490)
T ss_pred             HHHHHhCCCCCch----HHHHHHHHHHHHHhhhhc--chhcCCCc-------ccHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999999875432    112222223222221110  01112221       1234455667777777777765543111


Q ss_pred             cCC-CCCCccHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcC----
Q 009887          280 RNE-GKSSKDFLQTLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVA----  354 (523)
Q Consensus       280 ~~~-~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~----  354 (523)
                      .++ .....|+++.+++.     ..++++++.+++..+++||+|||+++++|++++|++||++|+|+|+|++++++    
T Consensus       255 ~~~~~~~~~d~l~~ll~~-----~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~  329 (490)
T PLN02500        255 EEDESVEEDDLLGWVLKH-----SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQ  329 (490)
T ss_pred             cccCCCCcchHHHHHHhc-----cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcccc
Confidence            111 12346899999873     24899999999999999999999999999999999999999999999999863    


Q ss_pred             -CCCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCCCCCCc
Q 009887          355 -PDSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQDFRPDR  433 (523)
Q Consensus       355 -~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeR  433 (523)
                       +++.++++++++||||+|||+||||++|+++.. +|.+++|++++||.|||||.|+++.+++||||++|+||++|+|||
T Consensus       330 ~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeR  408 (490)
T PLN02500        330 SGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWR  408 (490)
T ss_pred             CCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhh
Confidence             234579999999999999999999999999984 699999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCC----CCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceee
Q 009887          434 FLEDVKIGDF----QGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAV  509 (523)
Q Consensus       434 wl~~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v  509 (523)
                      |+++......    ...+..|+|||+|+|.|+|++||++|++++++.|+++|+|++.+++.. .. . .. ..++.+++|
T Consensus       409 fl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~-~~-~-~~-~~~~~~l~~  484 (490)
T PLN02500        409 WQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA-FA-F-PF-VDFPKGLPI  484 (490)
T ss_pred             ccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc-ee-c-cc-ccCCCCceE
Confidence            9974321110    124468999999999999999999999999999999999998765432 11 1 22 344568988


Q ss_pred             eecc
Q 009887          510 IPTP  513 (523)
Q Consensus       510 ~~~~  513 (523)
                      ++++
T Consensus       485 ~~~~  488 (490)
T PLN02500        485 RVRR  488 (490)
T ss_pred             EEEe
Confidence            8865


No 15 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.9e-75  Score=586.22  Aligned_cols=447  Identities=21%  Similarity=0.364  Sum_probs=352.0

Q ss_pred             CCCCCCCCCCCCccccccccCc-------------------cHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHH
Q 009887           51 TPPLPPGPRPLPLVGNFLSLEP-------------------NLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVL  111 (523)
Q Consensus        51 ~~~~~pgP~~~p~~G~~~~~~~-------------------~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il  111 (523)
                      ....||||+++|++||++.+..                   .....+.+|+++||++|++++|+.+.|+++||+++++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            4456999999999999987632                   223357889999999999999999999999999999999


Q ss_pred             HhcCccccCCCchH--HHHHhhcCCccccCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc--c-CCCce
Q 009887          112 KEHDVVFANRDLPA--AASVLAYGGMSIAASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG--R-VGSPI  186 (523)
Q Consensus       112 ~~~~~~f~~~~~~~--~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~-~~~~v  186 (523)
                      .++.. +..++...  ......+++....+|+.|+++|+.+. +.|+..+++.+.+.+.++++++++.|.+  . ++.++
T Consensus       120 ~~~~~-~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~v  197 (516)
T PLN02290        120 TKYNT-VTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEV  197 (516)
T ss_pred             hcCCC-CCCCcchhhhHHHHHhcCCccccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence            88743 44444221  12223445555559999999999997 8999999999999999999999999975  2 23579


Q ss_pred             ehHHHHHHHHHHHHHHHHhcccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHH
Q 009887          187 KLRELMFLTFLDVATRMLWGASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRI  266 (523)
Q Consensus       187 d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~  266 (523)
                      |+.+++..+++|++++++||.+++..  +    ++.+.+...............+|++.++ +.+..++.....+.+.++
T Consensus       198 d~~~~~~~~~~~vi~~~~fG~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~-p~~~~~~~~~~~~~~~~~  270 (516)
T PLN02290        198 EIGEYMTRLTADIISRTEFDSSYEKG--K----QIFHLLTVLQRLCAQATRHLCFPGSRFF-PSKYNREIKSLKGEVERL  270 (516)
T ss_pred             EhHHHHHHHHHHHHHHHHcCCccccc--h----HHHHHHHHHHHHHHHhhhhhcCchhhhC-CChhHHHHHHHHHHHHHH
Confidence            99999999999999999999987543  1    2222222222211111111123444333 223334556667778888


Q ss_pred             HHHhhcCCCCCCCcC-CCCCCccHHHHHHHHhhcC---CCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHH
Q 009887          267 FESLLRPGQTGQDRN-EGKSSKDFLQTLLELQQQG---DYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELM  342 (523)
Q Consensus       267 ~~~~i~~~~~~~~~~-~~~~~~d~l~~ll~~~~~~---~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~  342 (523)
                      +.+.++++++....+ ......|+++.+++..++.   +..++++++.+++..+++||+|||+++++|++++|++||++|
T Consensus       271 ~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq  350 (516)
T PLN02290        271 LMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQ  350 (516)
T ss_pred             HHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHH
Confidence            888777665421111 1123469999999764421   234789999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCC
Q 009887          343 RKARNELEQVVAPDSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEV  422 (523)
Q Consensus       343 ~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~  422 (523)
                      +|+|+||++++|.+ .++++++++||||+|||+||||++|+++. ++|.+.+|++++||.||+||.|.++.+++||||++
T Consensus       351 ~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~  428 (516)
T PLN02290        351 DKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEEL  428 (516)
T ss_pred             HHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcCChhh
Confidence            99999999999864 78999999999999999999999999986 68999999999999999999999999999999999


Q ss_pred             C-CCCCCCCCCcccccccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccee
Q 009887          423 W-ENPQDFRPDRFLEDVKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMAL  501 (523)
Q Consensus       423 ~-~dp~~F~PeRwl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  501 (523)
                      | +||++|+||||+++.     ......|+|||.|+|.|+|++||++|++++++.|+++|+|++.++.+.  ......++
T Consensus       429 ~~~dP~~F~PeRfl~~~-----~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~--~~~~~~~~  501 (516)
T PLN02290        429 WGKDANEFNPDRFAGRP-----FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRH--APVVVLTI  501 (516)
T ss_pred             hCCChhhcCccccCCCC-----CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCccc--Cccceeee
Confidence            9 899999999999531     112347999999999999999999999999999999999998765321  12235778


Q ss_pred             ccCCceeeeeccCC
Q 009887          502 KKSEPLAVIPTPRS  515 (523)
Q Consensus       502 ~~~~~~~v~~~~r~  515 (523)
                      .|..+++|++++|+
T Consensus       502 ~p~~~~~~~~~~~~  515 (516)
T PLN02290        502 KPKYGVQVCLKPLN  515 (516)
T ss_pred             cCCCCCeEEEEeCC
Confidence            89999999999996


No 16 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.7e-74  Score=570.86  Aligned_cols=451  Identities=26%  Similarity=0.453  Sum_probs=358.0

Q ss_pred             CCCCCCCCccccccccC-ccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCchHHHHHhhcC
Q 009887           55 PPGPRPLPLVGNFLSLE-PNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLPAAASVLAYG  133 (523)
Q Consensus        55 ~pgP~~~p~~G~~~~~~-~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~~~~~  133 (523)
                      ||||+++|++||++++. .+++..+.+|+++||++|++++|+.++|+|+||+++++|+.++...|+.++.......+.++
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            68999999999998884 56899999999999999999999999999999999999999888788877654444434443


Q ss_pred             Ccccc---CCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc----cCCCceehHHHHHHHHHHHHHHHHhc
Q 009887          134 GMSIA---ASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG----RVGSPIKLRELMFLTFLDVATRMLWG  206 (523)
Q Consensus       134 ~~~~~---~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~----~~~~~vd~~~~~~~~~~~~i~~~~fG  206 (523)
                      +..+.   .|+.|+++||.+.+++|+...++.+.+.+.+.+..+++.+.+    ..++++|+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            32222   489999999988778898888888888888888888877753    24678999999999999999999999


Q ss_pred             ccccCCCCchH------HHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCCc
Q 009887          207 ASVRGEDWDPI------AIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQDR  280 (523)
Q Consensus       207 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  280 (523)
                      .+++..+....      ...+...+..............++|.+.++......+........+.++++..++++++... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  239 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIA-  239 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-
Confidence            98775421111      12233344444444333333456776555422212233333334445566666654443211 


Q ss_pred             CCCCCCccHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCccc
Q 009887          281 NEGKSSKDFLQTLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAPDSVVE  360 (523)
Q Consensus       281 ~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~~~~~  360 (523)
                       ......|+++.+++...    .++++++.+++..+++||+|||+++++|++++|++||++|+|+|+||+++++.+. ++
T Consensus       240 -~~~~~~d~l~~ll~~~~----~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~  313 (466)
T PLN02655        240 -RGEERDCYLDFLLSEAT----HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VT  313 (466)
T ss_pred             -CCCCcccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CC
Confidence             11234589999997642    4899999999999999999999999999999999999999999999999998644 89


Q ss_pred             ccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCCCCCCcccccccC
Q 009887          361 EFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQDFRPDRFLEDVKI  440 (523)
Q Consensus       361 ~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeRwl~~~~~  440 (523)
                      ++++++||||+|||+||||++|+++...+|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++...
T Consensus       314 ~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~  393 (466)
T PLN02655        314 EEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYE  393 (466)
T ss_pred             HHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcc
Confidence            99999999999999999999999998878999999999999999999999999999999999999999999999974221


Q ss_pred             CCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceeeeeccCCC
Q 009887          441 GDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAVIPTPRSL  516 (523)
Q Consensus       441 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  516 (523)
                         ......++|||+|+|.|||++||..|+++++++||++|+|++.++.. +.....++++.++.++.|++++|..
T Consensus       394 ---~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        394 ---SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             ---cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEeecCCcEEEEeecCC
Confidence               11235899999999999999999999999999999999999865532 1223457778899999999999863


No 17 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=3.6e-73  Score=565.16  Aligned_cols=493  Identities=24%  Similarity=0.420  Sum_probs=358.3

Q ss_pred             hhHHHHHHHHHHHHHHHH-HHHhhC--CCCCCCCCCCCCCCCCccccccccC-ccHH-HHHHHHHHHh-CCeEEEecCCe
Q 009887           23 SSRVIQILLAATFAISCY-AWLIKK--PTRSTPPLPPGPRPLPLVGNFLSLE-PNLH-HYFGKLSQIY-GPIFKLHLGSK   96 (523)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~pgP~~~p~~G~~~~~~-~~~~-~~~~~~~~ky-G~v~~v~~~~~   96 (523)
                      +.++++-.++.+..+.++ .++.+.  ..+...+.||||.++|++||++.+. ..+. .++.++.++| |+||++++|+.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~   86 (534)
T PLN03018          7 SFQILLGFIVFIASITLLGRILSRPSKTKDRSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGT   86 (534)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCc
Confidence            444554444444444444 222222  2233335799999999999998873 2232 3456666666 79999999999


Q ss_pred             eEEEeCCHHHHHHHHHhcCccccCCCchHHHHHhhcC--Ccccc-CCCcHHHHHHHHHHhhc-chhhHHHhHHHHHHHHH
Q 009887           97 LCIVIGSPSLAKQVLKEHDVVFANRDLPAAASVLAYG--GMSIA-ASPEWPKLRQVLVRETM-SNTSINASSAIRRQAVL  172 (523)
Q Consensus        97 ~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~~~~~--~~~~~-~g~~w~~~R~~~~~~~f-~~~~l~~~~~~~~~~~~  172 (523)
                      ++|+|+||+++++++.++...|+.++.......+..+  +..+. +|+.|+++|+.+. +.| +......+.+....+++
T Consensus        87 ~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~-~~~~~~~~~~~~~~~~~~~~~  165 (534)
T PLN03018         87 HTITINSDEIAREAFRERDADLADRPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVIT-TEIMSVKTLNMLEAARTIEAD  165 (534)
T ss_pred             cEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhhccCCCceEecCCCHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHH
Confidence            9999999999999999887778888755444433332  23333 5999999999997 554 45445555556666788


Q ss_pred             HHHHHHhc--cCCCceehHHHHHHHHHHHHHHHHhcccccCCCC-----chHHHHHHHHHHHHH---HHhCCCCcchhhc
Q 009887          173 RSMKDVSG--RVGSPIKLRELMFLTFLDVATRMLWGASVRGEDW-----DPIAIQFRELIEAMF---QLLGSGGLSDLFP  242 (523)
Q Consensus       173 ~l~~~l~~--~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~P  242 (523)
                      ++++.+.+  ..++++|+.+.+..+++|++++++||.++...+.     ......+...+....   ..+......+.+|
T Consensus       166 ~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (534)
T PLN03018        166 NLIAYIHSMYQRSETVDVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVE  245 (534)
T ss_pred             HHHHHHHHhcccCCceeHHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhh
Confidence            88888864  3456799999999999999999999998753210     111111222222222   1121112223344


Q ss_pred             -ccccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCCcCCC-CCCccHHHHHHHHhhcCCC-CCCHHHHHHHHHHHhhc
Q 009887          243 -LLARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQDRNEG-KSSKDFLQTLLELQQQGDY-SLSTDQIKAMFLDMAIG  319 (523)
Q Consensus       243 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~-~~~~d~l~~ll~~~~~~~~-~l~~~~i~~~~~~~~~A  319 (523)
                       ++.++...+...+.....+.+.+++++.++++++......+ ....|+++.+++..++++. .++++++.+++..+++|
T Consensus       246 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~a  325 (534)
T PLN03018        246 RWLRGWNIDGQEERAKVNVNLVRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIA  325 (534)
T ss_pred             hhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHH
Confidence             33322112223344445566677777777655431100011 2246999999987654332 48999999999999999


Q ss_pred             cccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccC
Q 009887          320 STDTTSITVEWAMTELLHKPELMRKARNELEQVVAPDSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLS  399 (523)
Q Consensus       320 G~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~  399 (523)
                      |+|||+++++|++++|+.||++|+|+++||+++++.++.++.+++.+||||+|||+||||++|+++...+|++.+|++++
T Consensus       326 G~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~  405 (534)
T PLN03018        326 AIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLG  405 (534)
T ss_pred             hhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeEC
Confidence            99999999999999999999999999999999998777789999999999999999999999999987789999999999


Q ss_pred             CcccCCCCEEEEechhhccCCCCCCCCCCCCCCcccccccCC-C--CCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHH
Q 009887          400 GYTIPKGSTIFINAWAIQTNPEVWENPQDFRPDRFLEDVKIG-D--FQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLAN  476 (523)
Q Consensus       400 g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeRwl~~~~~~-~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~  476 (523)
                      ||.|||||.|+++.+++||||++|+||++|+||||+++.... .  ....+..|+|||+|+|.|||++||.+|+++++++
T Consensus       406 G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~  485 (534)
T PLN03018        406 GYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLAR  485 (534)
T ss_pred             CEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999642210 0  0123457999999999999999999999999999


Q ss_pred             HHhhccccCCCCC-CCCccccccceeccCCceeeeeccCCCc
Q 009887          477 LLHLFEWSLPEET-KLDLSDKLLMALKKSEPLAVIPTPRSLS  517 (523)
Q Consensus       477 ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~r~~~  517 (523)
                      |+++|+|++.++. +.+.....+.+ ..+.+++|+++||.+.
T Consensus       486 ll~~f~~~~~~~~~~~~~~~~~~~~-~~p~~~~v~~~~R~~~  526 (534)
T PLN03018        486 FLQGFNWKLHQDFGPLSLEEDDASL-LMAKPLLLSVEPRLAP  526 (534)
T ss_pred             HHHhceEEeCCCCCCCCccccccce-ecCCCeEEEEEecccc
Confidence            9999999976653 33332223433 4556999999999543


No 18 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=6.5e-74  Score=568.67  Aligned_cols=447  Identities=19%  Similarity=0.282  Sum_probs=340.2

Q ss_pred             CCCCCCCCCccccccccC---ccHHHHHHHHHHHhCCeEE---EecCCeeEEEeCCHHHHHHHHHhcCccccCCCchHHH
Q 009887           54 LPPGPRPLPLVGNFLSLE---PNLHHYFGKLSQIYGPIFK---LHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLPAAA  127 (523)
Q Consensus        54 ~~pgP~~~p~~G~~~~~~---~~~~~~~~~~~~kyG~v~~---v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~  127 (523)
                      ..|||.++|++||+..+.   ....+++.++..+||..++   .++|+.++++|+||+++++|+.++...|.+++.....
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            478999999999997662   2345555666666887665   5789999999999999999999876667666433333


Q ss_pred             HHhhcCCccccCCCcHHHHHHHHHHhhcchhhHHHh--HHHHHHHHHHHHHHHhc--cCCCceehHHHHHHHHHHHHHHH
Q 009887          128 SVLAYGGMSIAASPEWPKLRQVLVRETMSNTSINAS--SAIRRQAVLRSMKDVSG--RVGSPIKLRELMFLTFLDVATRM  203 (523)
Q Consensus       128 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~--~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~~i~~~  203 (523)
                      ....+.+....+|+.|+++|+++. ++|+...+..+  .+.+.+.++.+++.+.+  .++.++|+.+.+.++++|+++++
T Consensus       112 ~~~~g~gl~~~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~  190 (500)
T PLN02169        112 FDVLGEGILTVDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSIL  190 (500)
T ss_pred             HHhhcCcccccCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhh
Confidence            344556777779999999999996 99998877643  35566777778777764  45678999999999999999999


Q ss_pred             HhcccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhccc----ccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 009887          204 LWGASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLL----ARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQD  279 (523)
Q Consensus       204 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l----~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  279 (523)
                      +||.+.+..+......++.+++.........   ..+.|++    ..+.+.+..++..++.+.+.+++.+.|+++++...
T Consensus       191 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~  267 (500)
T PLN02169        191 MTGYDPMSLSIEMLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEI  267 (500)
T ss_pred             eeCCCccccCCCCCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999876432111112344433333222111   1122321    11112334566778888888888888876654210


Q ss_pred             -cC-CCCCCccHHHHHHHHhhcC---CCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcC
Q 009887          280 -RN-EGKSSKDFLQTLLELQQQG---DYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVA  354 (523)
Q Consensus       280 -~~-~~~~~~d~l~~ll~~~~~~---~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~  354 (523)
                       .. .....+|+++.+++...+.   +..++++++.+++..+++||+|||+++++|++++|+.||++|+|+++||++++ 
T Consensus       268 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~-  346 (500)
T PLN02169        268 SRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF-  346 (500)
T ss_pred             ccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC-
Confidence             00 1122468999998764321   12478899999999999999999999999999999999999999999999874 


Q ss_pred             CCCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcc-cCCcccCCCCEEEEechhhccCCCCC-CCCCCCCCC
Q 009887          355 PDSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSN-LSGYTIPKGSTIFINAWAIQTNPEVW-ENPQDFRPD  432 (523)
Q Consensus       355 ~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~-i~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~Pe  432 (523)
                           +++++.+||||+|||+||||++|++|... |.+.+|.. ++|+.||+||.|.+++|++||||++| +||++|+||
T Consensus       347 -----~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~Pe  420 (500)
T PLN02169        347 -----DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPE  420 (500)
T ss_pred             -----CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCcc
Confidence                 57899999999999999999999999876 66555554 59999999999999999999999999 899999999


Q ss_pred             cccccccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceeeeec
Q 009887          433 RFLEDVKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAVIPT  512 (523)
Q Consensus       433 Rwl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  512 (523)
                      ||+++.... ....+..|+|||+|+|+|+|++||++|++++++.|+++|+|++.++.++.  ...+.+++++.+++|+++
T Consensus       421 Rfl~~~~~~-~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~~--~~~~~~l~~~~gl~l~l~  497 (500)
T PLN02169        421 RWISDNGGL-RHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIE--AIPSILLRMKHGLKVTVT  497 (500)
T ss_pred             ccCCCCCCc-cCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCcc--cccceEEecCCCEEEEEE
Confidence            999642211 11235689999999999999999999999999999999999987654432  234577889999999999


Q ss_pred             cC
Q 009887          513 PR  514 (523)
Q Consensus       513 ~r  514 (523)
                      +|
T Consensus       498 ~~  499 (500)
T PLN02169        498 KK  499 (500)
T ss_pred             eC
Confidence            87


No 19 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.7e-73  Score=561.76  Aligned_cols=431  Identities=19%  Similarity=0.295  Sum_probs=343.0

Q ss_pred             CCCCCCCCCCCCCccccccccCccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCchHHHHH
Q 009887           50 STPPLPPGPRPLPLVGNFLSLEPNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLPAAASV  129 (523)
Q Consensus        50 ~~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~  129 (523)
                      .+...||||+++|++||++.+..++..++++++++||++|++++|+.++++++||+++++++.++...|..+........
T Consensus        28 ~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~  107 (463)
T PLN02774         28 SKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDI  107 (463)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHH
Confidence            33456889999999999988877788899999999999999999999999999999999999877766644433233233


Q ss_pred             hhcCCccccCCCcHHHHHHHHHHhhcchhhHHH-hHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHHHHhccc
Q 009887          130 LAYGGMSIAASPEWPKLRQVLVRETMSNTSINA-SSAIRRQAVLRSMKDVSGRVGSPIKLRELMFLTFLDVATRMLWGAS  208 (523)
Q Consensus       130 ~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~  208 (523)
                      ++.++....+|+.|+.+|+.+. ++|+...++. +.+.+.+.+.+++++|.  .++++|+.+.+..+++++++.++||..
T Consensus       108 lg~~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~g~~  184 (463)
T PLN02774        108 LGTCNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWD--GLKTIDIQEKTKEMALLSALKQIAGTL  184 (463)
T ss_pred             hCccchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhC--CCCCEEeeHHHHHHHHHHHHHHHcCCC
Confidence            3333444458999999999996 8999998886 78888888889888884  346799999999999999999999976


Q ss_pred             ccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCCcCCCCCCcc
Q 009887          209 VRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQDRNEGKSSKD  288 (523)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d  288 (523)
                      ....     ..++.+.+..   ..... .  .+|.  ++ +....++..++.+.+.+++.+.++++++.     ....+|
T Consensus       185 ~~~~-----~~~~~~~~~~---~~~~~-~--~~~~--~l-p~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~~~d  245 (463)
T PLN02774        185 SKPI-----SEEFKTEFFK---LVLGT-L--SLPI--DL-PGTNYRSGVQARKNIVRMLRQLIQERRAS-----GETHTD  245 (463)
T ss_pred             ChHH-----HHHHHHHHHH---Hhccc-c--cCCc--CC-CChhhhHHHHHHHHHHHHHHHHHHHHHhc-----CCCccc
Confidence            4221     1222222222   11110 0  1121  11 11123455677888888888888776542     133569


Q ss_pred             HHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCC---CCcccccccC
Q 009887          289 FLQTLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAP---DSVVEEFHLA  365 (523)
Q Consensus       289 ~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~---~~~~~~~~l~  365 (523)
                      +++.+++... ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++.   ++.+++++++
T Consensus       246 ~l~~ll~~~~-~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~  324 (463)
T PLN02774        246 MLGYLMRKEG-NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYK  324 (463)
T ss_pred             HHHHHHhCcc-CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHh
Confidence            9999987432 22358999999999999999999999999999999999999999999999999863   3467899999


Q ss_pred             CCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCCCCCCcccccccCCCCCC
Q 009887          366 RLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQDFRPDRFLEDVKIGDFQG  445 (523)
Q Consensus       366 ~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeRwl~~~~~~~~~~  445 (523)
                      +||||+|||+|+||++|+++. .+|.+++|++++||.||||+.|+++++.+||||++|+||++|+||||+++..    ..
T Consensus       325 ~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~----~~  399 (463)
T PLN02774        325 SMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSL----ES  399 (463)
T ss_pred             cCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCc----CC
Confidence            999999999999999999986 5699999999999999999999999999999999999999999999996421    11


Q ss_pred             CcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceeeeecc
Q 009887          446 NNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAVIPTP  513 (523)
Q Consensus       446 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  513 (523)
                      . ..|+|||+|+|.|||++||++|++++++.|+++|+|++.++.+...    ...+.|+.+++|+++|
T Consensus       400 ~-~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~----~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        400 H-NYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMK----FPRVEAPNGLHIRVSP  462 (463)
T ss_pred             C-ccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcccc----CCCCCCCCCceEEeee
Confidence            2 2699999999999999999999999999999999999876643221    2234578899999875


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=3.4e-74  Score=575.52  Aligned_cols=450  Identities=29%  Similarity=0.554  Sum_probs=367.5

Q ss_pred             CCCCCCCCccccccccC--ccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCchHHHH----
Q 009887           55 PPGPRPLPLVGNFLSLE--PNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLPAAAS----  128 (523)
Q Consensus        55 ~pgP~~~p~~G~~~~~~--~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~----  128 (523)
                      ||||+++|++||++++.  ++++.++.+++++||+||++++++.++++|+||+++++|+.++...|+.++......    
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999985  789999999999999999999999999999999999999999876776653333332    


Q ss_pred             HhhcCCccccCCCcHHHHHHHHHHhhcchh-hHHHhHHHHHHHHHHHHHHHhccCC--CceehHHHHHHHHHHHHHHHHh
Q 009887          129 VLAYGGMSIAASPEWPKLRQVLVRETMSNT-SINASSAIRRQAVLRSMKDVSGRVG--SPIKLRELMFLTFLDVATRMLW  205 (523)
Q Consensus       129 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~-~l~~~~~~~~~~~~~l~~~l~~~~~--~~vd~~~~~~~~~~~~i~~~~f  205 (523)
                      ...+.+....+++.|+.+|+.+. +.|+.. .+ .+.+.+.+.++.+++.|....+  ..+|+.++++.+++|++++++|
T Consensus        81 ~~~~~~l~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~f  158 (463)
T PF00067_consen   81 PFGGKGLFFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLF  158 (463)
T ss_dssp             HHTTTSSTTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeecccccccccccccccc
Confidence            33444555558899999999997 777777 66 8999999999999999987332  3699999999999999999999


Q ss_pred             cccccCCCCchHHHHHHHHHHHHHHHhCC--CCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCCcCCC
Q 009887          206 GASVRGEDWDPIAIQFRELIEAMFQLLGS--GGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQDRNEG  283 (523)
Q Consensus       206 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  283 (523)
                      |.+++..+ +....++.+.+......+..  ..+...+|++.++ +....+...++.+.+.+++.+.++++++.... ..
T Consensus       159 G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~  235 (463)
T PF00067_consen  159 GKDFGSLD-DEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREELDD-GD  235 (463)
T ss_dssp             SSHHHGTT-HHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS-SS
T ss_pred             cceeeecc-ccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc-cc
Confidence            99987542 33345566666666554422  1234456654444 44455667777788888888888877653211 12


Q ss_pred             CCCccHHHHHHHHh-hcCC-CCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCcccc
Q 009887          284 KSSKDFLQTLLELQ-QQGD-YSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAPDSVVEE  361 (523)
Q Consensus       284 ~~~~d~l~~ll~~~-~~~~-~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~~~~~~  361 (523)
                      ....|+++.++... +.++ ..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++||+++.++++.++.
T Consensus       236 ~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~  315 (463)
T PF00067_consen  236 ESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITF  315 (463)
T ss_dssp             SSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            35679999999987 3333 379999999999999999999999999999999999999999999999999977778999


Q ss_pred             cccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCCCCCCcccccccCC
Q 009887          362 FHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQDFRPDRFLEDVKIG  441 (523)
Q Consensus       362 ~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeRwl~~~~~~  441 (523)
                      +++++||||+|||+||+|++|+++..++|++.+|++++||.||+||.|+++.+.+|+||++|+||++|+||||+++..  
T Consensus       316 ~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~--  393 (463)
T PF00067_consen  316 EDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG--  393 (463)
T ss_dssp             HHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS--
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence            999999999999999999999999668899999999999999999999999999999999999999999999998533  


Q ss_pred             CCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceeeee
Q 009887          442 DFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAVIP  511 (523)
Q Consensus       442 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  511 (523)
                      ........|+|||+|+|.|||++||++|++++++.||++|||+++++............+.++.++.|++
T Consensus       394 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  394 ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEEEE
T ss_pred             ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEEeC
Confidence            1234567899999999999999999999999999999999999976644433333225567777788764


No 21 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.4e-73  Score=523.10  Aligned_cols=452  Identities=25%  Similarity=0.352  Sum_probs=376.6

Q ss_pred             CCCCCCCCCCCCCcccccccc----CccHHHHHHHHHHHhCCeEEEe-cCCeeEEEeCCHHHHHHHHHhcCccccCCC--
Q 009887           50 STPPLPPGPRPLPLVGNFLSL----EPNLHHYFGKLSQIYGPIFKLH-LGSKLCIVIGSPSLAKQVLKEHDVVFANRD--  122 (523)
Q Consensus        50 ~~~~~~pgP~~~p~~G~~~~~----~~~~~~~~~~~~~kyG~v~~v~-~~~~~~vvv~dp~~i~~il~~~~~~f~~~~--  122 (523)
                      ++...+|||.++|++|.+..+    ..+.++.+.+.+++||+||+.. +|+...|.+.+|++++.++++.+. +..++  
T Consensus        47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~  125 (519)
T KOG0159|consen   47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLL  125 (519)
T ss_pred             CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccc
Confidence            445679999999999988733    4678999999999999999999 788899999999999999998773 23332  


Q ss_pred             --chHHHHHhhcC--CccccCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc--c---CCCceehHHHHH
Q 009887          123 --LPAAASVLAYG--GMSIAASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG--R---VGSPIKLRELMF  193 (523)
Q Consensus       123 --~~~~~~~~~~~--~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~---~~~~vd~~~~~~  193 (523)
                        .+.......++  |....+|+.|.+.|..+++.++++++++.|.+.+++.+++++..++.  +   ...+.|+.+.+.
T Consensus       126 ~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~  205 (519)
T KOG0159|consen  126 IEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELY  205 (519)
T ss_pred             cchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHH
Confidence              22223334443  44444999999999999988999999999999999999999999876  2   334789999999


Q ss_pred             HHHHHHHHHHHhcccccCCC--CchHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhh
Q 009887          194 LTFLDVATRMLWGASVRGED--WDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLL  271 (523)
Q Consensus       194 ~~~~~~i~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i  271 (523)
                      +++++.|+.+.||.+++...  .++....++++++.++.....   ..+.|.+.++.+.+.+++..++.+.+.+.....|
T Consensus       206 ~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~---l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~I  282 (519)
T KOG0159|consen  206 RWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQ---LMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYI  282 (519)
T ss_pred             HHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHH---HHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999754  345667788888887766543   3344555554477778888888888888887777


Q ss_pred             cCCCCCCCcCCC--CCCccHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 009887          272 RPGQTGQDRNEG--KSSKDFLQTLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNEL  349 (523)
Q Consensus       272 ~~~~~~~~~~~~--~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei  349 (523)
                      ++..++...++.  .+..+.+..++...     .++.+++..+++.+++||.||||++++|+||+|++||++|++|++|+
T Consensus       283 d~~l~~l~~~~~~~~~~~~~l~~~L~~~-----~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei  357 (519)
T KOG0159|consen  283 DNALEELEKQDSAGSEYTGSLLELLLRK-----ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEI  357 (519)
T ss_pred             HHHHHHHHhccccccchhHHHHHHHHHc-----cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHH
Confidence            766542211111  23334444444433     37899999999999999999999999999999999999999999999


Q ss_pred             HHhcCC-CCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCC
Q 009887          350 EQVVAP-DSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQD  428 (523)
Q Consensus       350 ~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~  428 (523)
                      .++... +..++.+++.++|||.||||||+||||.+++.. |+..+|.+++||.|||||.|.++++.+.+||++|++|++
T Consensus       358 ~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~-R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~  436 (519)
T KOG0159|consen  358 LAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNG-RVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEE  436 (519)
T ss_pred             HhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccc-cccchhceeccceecCCCeEEEeehhhccChhhCCCccc
Confidence            999987 567899999999999999999999999999855 999999999999999999999999999999999999999


Q ss_pred             CCCCcccccccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCcee
Q 009887          429 FRPDRFLEDVKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLA  508 (523)
Q Consensus       429 F~PeRwl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (523)
                      |+||||+++..   ...++..++|||.|+|+|+|+++|.+|+-++|++++++|+++..+++++++  ...+++.|..++.
T Consensus       437 F~PeRWL~~~~---~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~--~~~~il~P~~~l~  511 (519)
T KOG0159|consen  437 FLPERWLKPST---KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEY--VYRFILVPNRPLR  511 (519)
T ss_pred             cChhhhccccc---CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccc--eeEEEEcCCCCcc
Confidence            99999998542   245778999999999999999999999999999999999999888766654  5678889999999


Q ss_pred             eeeccCCC
Q 009887          509 VIPTPRSL  516 (523)
Q Consensus       509 v~~~~r~~  516 (523)
                      .++++|++
T Consensus       512 f~f~~r~~  519 (519)
T KOG0159|consen  512 FKFRPRNE  519 (519)
T ss_pred             eeeeeCCC
Confidence            99999963


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.1e-72  Score=565.62  Aligned_cols=453  Identities=20%  Similarity=0.301  Sum_probs=338.2

Q ss_pred             CCCCCCCCccccccccCccHHHHHHHHHHHh---CCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCchH-HHHHh
Q 009887           55 PPGPRPLPLVGNFLSLEPNLHHYFGKLSQIY---GPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLPA-AASVL  130 (523)
Q Consensus        55 ~pgP~~~p~~G~~~~~~~~~~~~~~~~~~ky---G~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~~-~~~~~  130 (523)
                      +|||.++|++||++.+..+ +..+.+|.++|   |++|++++|+.+.++++||+++++|+.++...|....... ....+
T Consensus        32 ~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~  110 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVL  110 (516)
T ss_pred             cCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHHH
Confidence            7899999999998765333 33456677777   7999999999999999999999999987644555443321 22233


Q ss_pred             hcCCccccCCCcHHHHHHHHHHhhcchhhHHHhHHHH-HHHHHHHHHHHhc--cCCCceehHHHHHHHHHHHHHHHHhcc
Q 009887          131 AYGGMSIAASPEWPKLRQVLVRETMSNTSINASSAIR-RQAVLRSMKDVSG--RVGSPIKLRELMFLTFLDVATRMLWGA  207 (523)
Q Consensus       131 ~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~-~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~~i~~~~fG~  207 (523)
                      .+.++...+|+.|+++||.+. +.|+..+++.+.+.+ .+.++.+++.+.+  .+++++|+.+++..+++|+++.++||.
T Consensus       111 ~g~~l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~  189 (516)
T PLN03195        111 LGDGIFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGFGV  189 (516)
T ss_pred             hcCeeeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHhCC
Confidence            445555458999999999996 899999999998876 5666677766653  356789999999999999999999999


Q ss_pred             cccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCCcC---CCC
Q 009887          208 SVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQDRN---EGK  284 (523)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~---~~~  284 (523)
                      +++..+.+.....+.+.++........... ..++.+.++......++..+..+.+.+++.+.++++++....+   ...
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  268 (516)
T PLN03195        190 EIGTLSPSLPENPFAQAFDTANIIVTLRFI-DPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKSGKK  268 (516)
T ss_pred             CccccccCCCccHHHHHHHHHHHHHHHHHh-cchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            987543111112233333332221110000 0011111111111123344566667777777776554321100   112


Q ss_pred             CCccHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCC---------
Q 009887          285 SSKDFLQTLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAP---------  355 (523)
Q Consensus       285 ~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~---------  355 (523)
                      ...|+++.+++..++++..++++++.+++..+++||+|||+++++|++++|++||++|+|+|+|++++++.         
T Consensus       269 ~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~  348 (516)
T PLN03195        269 VKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPED  348 (516)
T ss_pred             ccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccc
Confidence            35689999997654434469999999999999999999999999999999999999999999999998642         


Q ss_pred             -----------CCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCccc-CCcccCCCCEEEEechhhccCCCCC
Q 009887          356 -----------DSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNL-SGYTIPKGSTIFINAWAIQTNPEVW  423 (523)
Q Consensus       356 -----------~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~  423 (523)
                                 .+.++++++.+||||+|||+||||++|+++... |.+.+|..+ +|+.|||||.|.++++.+||||++|
T Consensus       349 ~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~-r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~  427 (516)
T PLN03195        349 SQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDP-KGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNW  427 (516)
T ss_pred             cchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchh-hhhccCcCcCCCcEECCCCEEEEehHhhccChhhh
Confidence                       245789999999999999999999999999865 656666555 9999999999999999999999999


Q ss_pred             -CCCCCCCCCcccccccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceec
Q 009887          424 -ENPQDFRPDRFLEDVKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALK  502 (523)
Q Consensus       424 -~dp~~F~PeRwl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  502 (523)
                       +||++|+||||+++...  ....+..|+|||+|+|.|+|++||++|++++++.++++|+|++.++.+...  ....++.
T Consensus       428 g~dP~~F~PeRwl~~~~~--~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~  503 (516)
T PLN03195        428 GPDAASFKPERWIKDGVF--QNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKY--RMMTILS  503 (516)
T ss_pred             ccChhhcCCcccCCCCCc--CCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCccee--eeeeEEe
Confidence             99999999999963210  112445799999999999999999999999999999999999876544332  3345677


Q ss_pred             cCCceeeeeccCC
Q 009887          503 KSEPLAVIPTPRS  515 (523)
Q Consensus       503 ~~~~~~v~~~~r~  515 (523)
                      +..+++|++++|+
T Consensus       504 ~~~~~~v~~~~r~  516 (516)
T PLN03195        504 MANGLKVTVSRRS  516 (516)
T ss_pred             cCCCEEEEEEeCC
Confidence            8899999999984


No 23 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=8.5e-72  Score=550.55  Aligned_cols=453  Identities=20%  Similarity=0.334  Sum_probs=356.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHh-hCCCCCCCCCCCCCCCCCcccccccc-CccHHHHHHHHHHHhCCeEEEecCCeeEEE
Q 009887           23 SSRVIQILLAATFAISCYAWLI-KKPTRSTPPLPPGPRPLPLVGNFLSL-EPNLHHYFGKLSQIYGPIFKLHLGSKLCIV  100 (523)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pgP~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~v~~~~~~~vv  100 (523)
                      ++++..++++++++++...+.. +....++.+.||||.++|++|++..+ ..+++.++.+++++||++|++++++.++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~   83 (463)
T PLN02196          4 SALFLTLFAGALFLCLLRFLAGFRRSSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVM   83 (463)
T ss_pred             HhhhhHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEE
Confidence            3444445544444444443333 34445566789999999999998875 678999999999999999999999999999


Q ss_pred             eCCHHHHHHHHHhcCccccCCCchHHHHHhhc-CCccccCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHh
Q 009887          101 IGSPSLAKQVLKEHDVVFANRDLPAAASVLAY-GGMSIAASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVS  179 (523)
Q Consensus       101 v~dp~~i~~il~~~~~~f~~~~~~~~~~~~~~-~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~  179 (523)
                      ++||+++++++.++...|... .........+ .+....+|+.|+++|+++. +.|+..+++.+.+.+.+.+.++++.|.
T Consensus        84 v~~p~~~~~vl~~~~~~~~~~-~~~~~~~~~g~~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~  161 (463)
T PLN02196         84 ISSPEAAKFVLVTKSHLFKPT-FPASKERMLGKQAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE  161 (463)
T ss_pred             EcCHHHHHHHHhCCCCccccc-CchHHHHHcCcccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC
Confidence            999999999998877666422 2222222233 3444459999999999997 899999999999999999999999884


Q ss_pred             ccCCCceehHHHHHHHHHHHHHHHHhcccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHH
Q 009887          180 GRVGSPIKLRELMFLTFLDVATRMLWGASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKL  259 (523)
Q Consensus       180 ~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~  259 (523)
                         ++++|+.+++..+++++++.++||.+....     ...+.+.+......      ...+|+.  + +....++..++
T Consensus       162 ---~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~-----~~~~~~~~~~~~~~------~~~~~~~--~-p~~~~~~~~~a  224 (463)
T PLN02196        162 ---GTQINTYQEMKTYTFNVALLSIFGKDEVLY-----REDLKRCYYILEKG------YNSMPIN--L-PGTLFHKSMKA  224 (463)
T ss_pred             ---CCeEEeHHHHHHHHHHHHHHHHcCCCCchH-----HHHHHHHHHHHhcc------hhccccc--C-CCccchHHHHH
Confidence               357999999999999999999999875321     11222222111110      1112321  1 11223456677


Q ss_pred             HHHHHHHHHHhhcCCCCCCCcCCCCCCccHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhCh
Q 009887          260 TARFDRIFESLLRPGQTGQDRNEGKSSKDFLQTLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKP  339 (523)
Q Consensus       260 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~P  339 (523)
                      .+.+.+++.+.++++++.     .....|+++.+++.    +..++++++.++++.+++||+|||+++++|++++|++||
T Consensus       225 ~~~~~~~~~~~i~~~~~~-----~~~~~d~l~~ll~~----~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P  295 (463)
T PLN02196        225 RKELAQILAKILSKRRQN-----GSSHNDLLGSFMGD----KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENP  295 (463)
T ss_pred             HHHHHHHHHHHHHHHhhc-----CCCcccHHHHHHhc----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCH
Confidence            788888888888766542     12346899988752    135899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCC---CCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhh
Q 009887          340 ELMRKARNELEQVVAP---DSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAI  416 (523)
Q Consensus       340 e~~~~lr~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~  416 (523)
                      ++|+|+++|++++.+.   ++.++++++++||||+|||+||||++|++++.. |.+.+|++++||.|||||.|+++.+++
T Consensus       296 ~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g~~IpkGt~v~~~~~~~  374 (463)
T PLN02196        296 SVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEGYLIPKGWKVLPLFRNI  374 (463)
T ss_pred             HHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccc-eeeccccccCCEEeCCCCEEEeeHHHh
Confidence            9999999999998863   356889999999999999999999999999865 999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCcccccccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCcccc
Q 009887          417 QTNPEVWENPQDFRPDRFLEDVKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDK  496 (523)
Q Consensus       417 ~~d~~~~~dp~~F~PeRwl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~  496 (523)
                      ||||++|+||++|+||||+++.       .+..++|||+|+|.|+|+++|++|++++++.|+++|+|++.+++. +.  .
T Consensus       375 ~rd~~~~~dP~~F~PeRfl~~~-------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~--~  444 (463)
T PLN02196        375 HHSADIFSDPGKFDPSRFEVAP-------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN-GI--Q  444 (463)
T ss_pred             cCCchhcCCcCccChhhhcCCC-------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC-ce--E
Confidence            9999999999999999999631       345899999999999999999999999999999999999876532 22  2


Q ss_pred             ccceeccCCceeeeeccC
Q 009887          497 LLMALKKSEPLAVIPTPR  514 (523)
Q Consensus       497 ~~~~~~~~~~~~v~~~~r  514 (523)
                      ...+..|..+++|+++.+
T Consensus       445 ~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        445 YGPFALPQNGLPIALSRK  462 (463)
T ss_pred             EcccccCCCCceEEEecC
Confidence            333457888999988754


No 24 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=7.5e-72  Score=561.18  Aligned_cols=441  Identities=21%  Similarity=0.357  Sum_probs=336.7

Q ss_pred             cccccc-CccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCchHHHHHhhcCCccccCCCcH
Q 009887           65 GNFLSL-EPNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLPAAASVLAYGGMSIAASPEW  143 (523)
Q Consensus        65 G~~~~~-~~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~g~~w  143 (523)
                      |++..+ ++..+..+.+++++|||||++++|+.++++|+||+.+++|+.++...|.++..........+.+....+|+.|
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~w  222 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIW  222 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHH
Confidence            444444 5668899999999999999999999999999999999999997766676654333323333444444599999


Q ss_pred             HHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc--cCCCceehHHHHHHHHHHHHHHHHhcccccCCCC-chHHHH
Q 009887          144 PKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG--RVGSPIKLRELMFLTFLDVATRMLWGASVRGEDW-DPIAIQ  220 (523)
Q Consensus       144 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~-~~~~~~  220 (523)
                      +.+|+.+. +.|+...++.+.+.+.+.++.+++.|.+  .+++++|+...+..+++|+|+.++||.+++..+. +.....
T Consensus       223 r~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~  301 (633)
T PLN02738        223 RVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEA  301 (633)
T ss_pred             HHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHH
Confidence            99999997 9999999999999999999999999975  4577999999999999999999999999875321 222223


Q ss_pred             HHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcC-------CCCCCCcC-CCCCCccHHHH
Q 009887          221 FRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRP-------GQTGQDRN-EGKSSKDFLQT  292 (523)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~-------~~~~~~~~-~~~~~~d~l~~  292 (523)
                      +...+.............+.+|.+..+.  ...++..+..+.+.+.++.+++.       +....... ......|+++.
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~p~~~~l~--~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~  379 (633)
T PLN02738        302 VYTVLREAEDRSVSPIPVWEIPIWKDIS--PRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHF  379 (633)
T ss_pred             HHHHHHHHHHHhhcchhhhhhhHHhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHH
Confidence            3333332221111111112233332221  11223333344444444333321       11100000 11234589999


Q ss_pred             HHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCcccccccCCCchHHH
Q 009887          293 LLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAPDSVVEEFHLARLPYLEA  372 (523)
Q Consensus       293 ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a  372 (523)
                      |++..    ..++++++.++++.+++||+|||+++|+|++++|++||++|+|+|+|+++++++ +.++++++++||||+|
T Consensus       380 Ll~~~----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~A  454 (633)
T PLN02738        380 LLASG----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTR  454 (633)
T ss_pred             HHHcC----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHH
Confidence            98753    248999999999999999999999999999999999999999999999999984 6789999999999999


Q ss_pred             HHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCCCCCCcccccccCCCCCCCcceeee
Q 009887          373 IVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQDFRPDRFLEDVKIGDFQGNNFNYLP  452 (523)
Q Consensus       373 ~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeRwl~~~~~~~~~~~~~~~~~  452 (523)
                      ||+|+|||+|+++.. +|.+.+|.+++||.||+||.|.++.+.+||||++|+||++|+||||+.+............|+|
T Consensus       455 VIkEtLRL~p~~p~~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vp  533 (633)
T PLN02738        455 VINESLRLYPQPPVL-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLP  533 (633)
T ss_pred             HHHHHHhcCCCcccc-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeC
Confidence            999999999999985 5889999999999999999999999999999999999999999999853211111224458999


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceeeeeccCC
Q 009887          453 FGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAVIPTPRS  515 (523)
Q Consensus       453 Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  515 (523)
                      ||.|+|.|+|++||++|++++|+.|+++|+|++.++.+ +.....+.++.++.+++|++++|.
T Consensus       534 FG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~  595 (633)
T PLN02738        534 FGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRT  595 (633)
T ss_pred             CCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECC
Confidence            99999999999999999999999999999999876542 222234567788899999999997


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.7e-71  Score=547.77  Aligned_cols=436  Identities=20%  Similarity=0.307  Sum_probs=345.2

Q ss_pred             CCCCCCCCCCCCCCCcccccccc-----CccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCC
Q 009887           48 TRSTPPLPPGPRPLPLVGNFLSL-----EPNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRD  122 (523)
Q Consensus        48 ~~~~~~~~pgP~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~  122 (523)
                      ++++.+.||||.++|++||++.+     ..+++.++.+++++||+||++++|+.+.|+++||+++++++.++...|..+.
T Consensus         2 ~~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          2 SKKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            35667789999999999999887     2478999999999999999999999999999999999999998887777553


Q ss_pred             chHHHHHhhc-CCccccCCCcHHHHHHHHHHhhcchhhHHH-hHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHH
Q 009887          123 LPAAASVLAY-GGMSIAASPEWPKLRQVLVRETMSNTSINA-SSAIRRQAVLRSMKDVSGRVGSPIKLRELMFLTFLDVA  200 (523)
Q Consensus       123 ~~~~~~~~~~-~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~i  200 (523)
                      .. ....+.+ +++...+|+.|+++|+++. +.|+...+.. ..+.+.+.+.++++.|  ..++++|+.+.+..++++++
T Consensus        82 ~~-~~~~l~g~~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vi  157 (452)
T PLN03141         82 PK-SLTELMGKSSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSW--RDDPPVLVQDETKKIAFEVL  157 (452)
T ss_pred             ch-hHHHHhCcccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhc--cCCCCEEhHHHHHHHHHHHH
Confidence            22 2333333 3344459999999999996 7888777765 4567777777777776  34668999999999999999


Q ss_pred             HHHHhcccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCCc
Q 009887          201 TRMLWGASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQDR  280 (523)
Q Consensus       201 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  280 (523)
                      ++++||.+....     ..++...+..+......  +...+|.       ....+..++.+++.+++...++++++....
T Consensus       158 ~~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  223 (452)
T PLN03141        158 VKALISLEPGEE-----MEFLKKEFQEFIKGLMS--LPIKLPG-------TRLYRSLQAKKRMVKLVKKIIEEKRRAMKN  223 (452)
T ss_pred             HHHHcCCCchHH-----HHHHHHHHHHHhhhHHh--CccCCCc-------hHhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999765321     12233333333222111  1111221       112344566788888888888766542211


Q ss_pred             CCC---CCCccHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcC---
Q 009887          281 NEG---KSSKDFLQTLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVA---  354 (523)
Q Consensus       281 ~~~---~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~---  354 (523)
                      +..   ....|+++.+++...   ..++++++.+++..+++||+|||+++++|++++|+.||++|+++++|++++.+   
T Consensus       224 ~~~~~~~~~~d~l~~ll~~~~---~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~  300 (452)
T PLN03141        224 KEEDETGIPKDVVDVLLRDGS---DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKA  300 (452)
T ss_pred             cCccccCChhhHHHHHHhcCC---CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccC
Confidence            110   124689999987542   45899999999999999999999999999999999999999999999998763   


Q ss_pred             -CCCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCCCCCCc
Q 009887          355 -PDSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQDFRPDR  433 (523)
Q Consensus       355 -~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeR  433 (523)
                       .++.++.+++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||+|+.|+++.+.+||||++|+||++|+|||
T Consensus       301 ~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeR  379 (452)
T PLN03141        301 DTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWR  379 (452)
T ss_pred             CCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCccc
Confidence             23457889999999999999999999999975 6799999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceeeeecc
Q 009887          434 FLEDVKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAVIPTP  513 (523)
Q Consensus       434 wl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  513 (523)
                      |+++.      ..+..|+|||+|+|.|+|++||.+|++++++.|+++|+|++.++...     ...+++|..++.|++++
T Consensus       380 fl~~~------~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  448 (452)
T PLN03141        380 WQEKD------MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV-----NFPTVRMKRKLPIWVTR  448 (452)
T ss_pred             ccCCC------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee-----ecccccCCCCceEEEEe
Confidence            99741      13458999999999999999999999999999999999997665322     12477889999999999


Q ss_pred             CCC
Q 009887          514 RSL  516 (523)
Q Consensus       514 r~~  516 (523)
                      |+.
T Consensus       449 ~~~  451 (452)
T PLN03141        449 IDD  451 (452)
T ss_pred             CCC
Confidence            964


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.4e-70  Score=549.65  Aligned_cols=441  Identities=20%  Similarity=0.327  Sum_probs=345.7

Q ss_pred             CCCCCCCCCCCCCCCcccccccc-----CccHHHHHHHHHHHhCC--eEEEecCCeeEEEeCCHHHHHHHHHhcCccccC
Q 009887           48 TRSTPPLPPGPRPLPLVGNFLSL-----EPNLHHYFGKLSQIYGP--IFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFAN  120 (523)
Q Consensus        48 ~~~~~~~~pgP~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~--v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~  120 (523)
                      .+.+.+.||||+++|++|+++.+     ..+++.++.+++++||+  +|++++++.+.++++||+++++++.+++ .|.+
T Consensus        37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~  115 (490)
T PLN02302         37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEP  115 (490)
T ss_pred             ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-cccc
Confidence            34555789999999999998876     35789999999999997  7899999999999999999999998764 4554


Q ss_pred             CCchHHHHHhhcCCccccCCCcHHHHHHHHHHhhc-chhhHHHhHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHH
Q 009887          121 RDLPAAASVLAYGGMSIAASPEWPKLRQVLVRETM-SNTSINASSAIRRQAVLRSMKDVSGRVGSPIKLRELMFLTFLDV  199 (523)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~  199 (523)
                      +........++.......+|+.|+++|+.+. +.| +.+.++.+.+.+.+.+.++++.+..  ++.+|+.+.+..+++++
T Consensus       116 ~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~~~~v  192 (490)
T PLN02302        116 GWPESTVELIGRKSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKLTFKI  192 (490)
T ss_pred             CCchhHHHHhccccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHHHHHH
Confidence            4322222222222233348999999999997 777 5788999999999999999999853  34699999999999999


Q ss_pred             HHHHHhcccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 009887          200 ATRMLWGASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQD  279 (523)
Q Consensus       200 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  279 (523)
                      +++++||.+++..     ...+...+.........  ....+|..       ..++..++.+.+.+++.+.++++++...
T Consensus       193 i~~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~~~~~~~  258 (490)
T PLN02302        193 IMYIFLSSESELV-----MEALEREYTTLNYGVRA--MAINLPGF-------AYHRALKARKKLVALFQSIVDERRNSRK  258 (490)
T ss_pred             HHHHHcCCCChHH-----HHHHHHHHHHHHHHhhh--CCcCCCch-------hhHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999999875432     12222222222111111  01112211       1233445566677777777766544221


Q ss_pred             cCCCCCCccHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCC--
Q 009887          280 RNEGKSSKDFLQTLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAPDS--  357 (523)
Q Consensus       280 ~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~~--  357 (523)
                      .+......|+++.+++..++++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++...  
T Consensus       259 ~~~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~  338 (490)
T PLN02302        259 QNISPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPG  338 (490)
T ss_pred             ccCCCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCC
Confidence            111134579999999876554456899999999999999999999999999999999999999999999999986421  


Q ss_pred             --cccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCCCCCCccc
Q 009887          358 --VVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQDFRPDRFL  435 (523)
Q Consensus       358 --~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeRwl  435 (523)
                        .++++++++||||+|||+|++|++|++++. +|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+||||+
T Consensus       339 ~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~  417 (490)
T PLN02302        339 QKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWD  417 (490)
T ss_pred             CCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcC
Confidence              378899999999999999999999999884 69999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceeeeeccCC
Q 009887          436 EDVKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAVIPTPRS  515 (523)
Q Consensus       436 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  515 (523)
                      ++.      ..+..++|||+|+|.|+|++||.+|++++++.++++|+|++.+++. +..  ......|..++.+++++|.
T Consensus       418 ~~~------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~--~~~~~~p~~~~~~~~~~~~  488 (490)
T PLN02302        418 NYT------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC-KVM--YLPHPRPKDNCLARITKVA  488 (490)
T ss_pred             CCC------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC-cce--eCCCCCCCCCceEEEEecc
Confidence            632      2445899999999999999999999999999999999999876531 221  2334788889999999986


Q ss_pred             C
Q 009887          516 L  516 (523)
Q Consensus       516 ~  516 (523)
                      +
T Consensus       489 ~  489 (490)
T PLN02302        489 S  489 (490)
T ss_pred             C
Confidence            4


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=7.2e-70  Score=534.56  Aligned_cols=452  Identities=20%  Similarity=0.310  Sum_probs=347.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCccccccccC-----ccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHH
Q 009887           32 AATFAISCYAWLIKKPTRSTPPLPPGPRPLPLVGNFLSLE-----PNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSL  106 (523)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~pgP~~~p~~G~~~~~~-----~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~  106 (523)
                      ++++++++.++..+. ...+.+.||||.++|++||++.+.     .++..++.+++++||++|++++++.+.++|+||++
T Consensus        10 ~~~~~~~~~~~~~~~-~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~   88 (472)
T PLN02987         10 LSSLAAIFFLLLRRT-RYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPET   88 (472)
T ss_pred             HHHHHHHHHHHHHhh-ccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHH
Confidence            333444344444433 355556799999999999998762     56889999999999999999999999999999999


Q ss_pred             HHHHHHhcCccccCCCchHHHHHhhcCCccccCCCcHHHHHHHHHHhhcchhhHHHhHH-HHHHHHHHHHHHHhccCCCc
Q 009887          107 AKQVLKEHDVVFANRDLPAAASVLAYGGMSIAASPEWPKLRQVLVRETMSNTSINASSA-IRRQAVLRSMKDVSGRVGSP  185 (523)
Q Consensus       107 i~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~  185 (523)
                      +++++.++...|..+........+++++....+|+.|+++|+++. +.++...++.+.. .+.+.++..++.|    +++
T Consensus        89 ~~~il~~~~~~f~~~~~~~~~~~lg~~~l~~~~g~~wr~~R~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  163 (472)
T PLN02987         89 NRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGNLHKKMHSLTM-SFANSSIIKDHLLLDIDRLIRFNLDSW----SSR  163 (472)
T ss_pred             HHHHHhCCCceEEecCcHHHHHHhCcccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHhh----ccc
Confidence            999999888778655433333333334555559999999999975 5555555554432 2233344444544    246


Q ss_pred             eehHHHHHHHHHHHHHHHHhcccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHH
Q 009887          186 IKLRELMFLTFLDVATRMLWGASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDR  265 (523)
Q Consensus       186 vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~  265 (523)
                      +++.+.+..++++++++++||.+.+..     ...+.+.+.......    ....+|++.     ...++..++.+++.+
T Consensus       164 v~~~~~~~~~t~~vi~~~~fg~~~~~~-----~~~~~~~~~~~~~~~----~~~~~p~l~-----~~~~~~~~~~~~~~~  229 (472)
T PLN02987        164 VLLMEEAKKITFELTVKQLMSFDPGEW-----TESLRKEYVLVIEGF----FSVPLPLFS-----TTYRRAIQARTKVAE  229 (472)
T ss_pred             eehHHHHHHHHHHHHHHHHcCCCChHH-----HHHHHHHHHHHHhhh----hcCCCcCCC-----chHHHHHHHHHHHHH
Confidence            999999999999999999999765322     122222222221111    112234431     224667778888999


Q ss_pred             HHHHhhcCCCCCCCcCCCCCCccHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHH
Q 009887          266 IFESLLRPGQTGQDRNEGKSSKDFLQTLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKA  345 (523)
Q Consensus       266 ~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~l  345 (523)
                      ++.+.++++++.... +....+|+++.+++..+    .++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus       230 ~~~~~i~~r~~~~~~-~~~~~~d~l~~ll~~~~----~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l  304 (472)
T PLN02987        230 ALTLVVMKRRKEEEE-GAEKKKDMLAALLASDD----GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQL  304 (472)
T ss_pred             HHHHHHHHHHhhhhc-cCcccccHHHHHHhcCC----CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHH
Confidence            999988877653211 11235699999997532    4899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcC---CCCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCC
Q 009887          346 RNELEQVVA---PDSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEV  422 (523)
Q Consensus       346 r~Ei~~~~~---~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~  422 (523)
                      ++|++++.+   ....++++++.+|||++||++||||++|+++. .+|++.+|++++||.||+||.|+++.+.+|+||++
T Consensus       305 ~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~  383 (472)
T PLN02987        305 KEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEY  383 (472)
T ss_pred             HHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECCCCEEEEehHHhhCCccc
Confidence            999999875   23457889999999999999999999999985 56999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcccccccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceec
Q 009887          423 WENPQDFRPDRFLEDVKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALK  502 (523)
Q Consensus       423 ~~dp~~F~PeRwl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  502 (523)
                      |+||++|+||||+++...   ......++|||+|+|.|||++||.+|++++++.|+++|+|++.++....    ...++.
T Consensus       384 ~~~p~~F~PeRfl~~~~~---~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~----~~~~~~  456 (472)
T PLN02987        384 FKDARTFNPWRWQSNSGT---TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLV----FFPTTR  456 (472)
T ss_pred             CCCccccCcccCCCCCCC---CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCcee----eccccc
Confidence            999999999999974221   1233579999999999999999999999999999999999987654322    234778


Q ss_pred             cCCceeeeeccCCC
Q 009887          503 KSEPLAVIPTPRSL  516 (523)
Q Consensus       503 ~~~~~~v~~~~r~~  516 (523)
                      |..++++++++|+-
T Consensus       457 p~~~~~~~~~~r~~  470 (472)
T PLN02987        457 TQKRYPINVKRRDV  470 (472)
T ss_pred             CCCCceEEEEeccc
Confidence            88899999999953


No 28 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=4.9e-70  Score=541.29  Aligned_cols=447  Identities=23%  Similarity=0.365  Sum_probs=348.7

Q ss_pred             CCCCCCCCcccccccc-----CccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCchHHHHH
Q 009887           55 PPGPRPLPLVGNFLSL-----EPNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLPAAASV  129 (523)
Q Consensus        55 ~pgP~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~~~~~~  129 (523)
                      --|-.+||++|..+.+     ++.++..+.+|+++||++|++++|+.+.++++||+++++|+.+.+..|.+++.......
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~   93 (489)
T PLN02936         14 WGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEF   93 (489)
T ss_pred             CCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHH
Confidence            4477789999988766     57789999999999999999999999999999999999999887667776654333333


Q ss_pred             hhcCCccccCCCcHHHHHHHHHHhhcchhhHHHhHH-HHHHHHHHHHHHHhc--cCCCceehHHHHHHHHHHHHHHHHhc
Q 009887          130 LAYGGMSIAASPEWPKLRQVLVRETMSNTSINASSA-IRRQAVLRSMKDVSG--RVGSPIKLRELMFLTFLDVATRMLWG  206 (523)
Q Consensus       130 ~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~~i~~~~fG  206 (523)
                      ..+.+....+|+.|+++|+.+. +.|+..++..+.+ .+.+.++.+++.+.+  .+++++|+.+++..+++|+++.++||
T Consensus        94 ~~~~~i~~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~fG  172 (489)
T PLN02936         94 LFGSGFAIAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVFN  172 (489)
T ss_pred             HhcCccccCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHcC
Confidence            3445555569999999999997 8999888887755 678888999998876  35678999999999999999999999


Q ss_pred             ccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhccc-----ccccccchhHHHHHHHHHHHHHHHHhhcCCCCC----
Q 009887          207 ASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLL-----ARFDLQGHQSKAKKLTARFDRIFESLLRPGQTG----  277 (523)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-----~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~----  277 (523)
                      .+++..+.+   .++.+.+...+..... .....+|++     .++.  +..++..++.+.+.+++.+.++++++.    
T Consensus       173 ~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~--p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~  246 (489)
T PLN02936        173 YNFDSLTTD---SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKIS--PRQIKAEKAVTVIRETVEDLVDKCKEIVEAE  246 (489)
T ss_pred             CCccccccC---cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccC--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            998764322   1223333322221111 011123322     1111  123455566666666766666543321    


Q ss_pred             CC---cCC--CCCCccHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 009887          278 QD---RNE--GKSSKDFLQTLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQV  352 (523)
Q Consensus       278 ~~---~~~--~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~  352 (523)
                      ..   .++  .....|+++.|++..+    .++++++.++++.+++||+|||+++++|++++|++||++|+|+|+|++++
T Consensus       247 ~~~~~~~~~~~~~~~d~l~~ll~~~~----~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~  322 (489)
T PLN02936        247 GEVIEGEEYVNDSDPSVLRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRV  322 (489)
T ss_pred             ccccccccccccCchHHHHHHHhccc----cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            00   000  1234689999886532    38999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCCCCCC
Q 009887          353 VAPDSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQDFRPD  432 (523)
Q Consensus       353 ~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~Pe  432 (523)
                      ++. ..++++++++||||+|||+||||++|+++...+|.+.+|+.++||.||+||.|+++.+.+||||++|+||++|+||
T Consensus       323 ~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~Pe  401 (489)
T PLN02936        323 LQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPE  401 (489)
T ss_pred             hcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCcc
Confidence            874 4578999999999999999999999999998878778888889999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceeeeec
Q 009887          433 RFLEDVKIGDFQGNNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAVIPT  512 (523)
Q Consensus       433 Rwl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  512 (523)
                      ||+++.........+..|+|||+|+|.|||++||++|++++++.|+++|++++++++++..  ..+.+..++.+++|+++
T Consensus       402 Rwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~  479 (489)
T PLN02936        402 RFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVM--TTGATIHTTNGLYMTVS  479 (489)
T ss_pred             ccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccce--ecceEEeeCCCeEEEEE
Confidence            9996422111122345899999999999999999999999999999999999887654432  23466778889999999


Q ss_pred             cCC
Q 009887          513 PRS  515 (523)
Q Consensus       513 ~r~  515 (523)
                      ||.
T Consensus       480 ~R~  482 (489)
T PLN02936        480 RRR  482 (489)
T ss_pred             eee
Confidence            985


No 29 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.8e-69  Score=485.58  Aligned_cols=442  Identities=21%  Similarity=0.369  Sum_probs=355.6

Q ss_pred             CCCCCCCCccccccccCccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCch-HHHHHhhcC
Q 009887           55 PPGPRPLPLVGNFLSLEPNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLP-AAASVLAYG  133 (523)
Q Consensus        55 ~pgP~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~-~~~~~~~~~  133 (523)
                      |-.-.|+||+|++..|+++|..+++++++|||+||++.++|+.+.++.||+....+++.....++-.... ......++.
T Consensus        34 Pli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~vFg~  113 (486)
T KOG0684|consen   34 PLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPVFGK  113 (486)
T ss_pred             cccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhhcCC
Confidence            3344689999999999999999999999999999999999999999999999999998874333323222 222333333


Q ss_pred             Cccc-cCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHH-HhccCCCceehHHHHHHHHHHHHHHHHhcccccC
Q 009887          134 GMSI-AASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKD-VSGRVGSPIKLRELMFLTFLDVATRMLWGASVRG  211 (523)
Q Consensus       134 ~~~~-~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~  211 (523)
                      |+.. ..+....++.+.+. ..+...+++++.+.+.+++.+.+.. |. ++|....+.+.+..+++.+.-..+||+....
T Consensus       114 ~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~-~s~~~d~l~~~~~~ii~tAs~~ll~~e~r~~  191 (486)
T KOG0684|consen  114 GVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLG-ESGETDGLYTFCRLIIFTASRLLLGGEVRDQ  191 (486)
T ss_pred             CccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhcccc-cccchhHhhhhhHHHhhhhHHHhhhhhhhhh
Confidence            3332 25566677777775 8899999999999999999999987 54 4677777888888888888888888877655


Q ss_pred             CCCchHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCCcCCCCCCccHHH
Q 009887          212 EDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQDRNEGKSSKDFLQ  291 (523)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~  291 (523)
                      .+     .+....+.++...+.  .+...||.  ++ +....++..++.+++.+++...+.++++..    .....|+++
T Consensus       192 ~d-----~~~a~l~~dLd~~F~--~~d~~FP~--~L-P~~~~r~~~ra~~~i~k~f~~~i~~rr~s~----s~~~~dmlq  257 (486)
T KOG0684|consen  192 LD-----ADVAKLYHDLDQGFQ--PFDFLFPY--NL-PIPLLRRRDRARKKISKIFSKIILDRRASI----SKWDNDMLQ  257 (486)
T ss_pred             hc-----chHHHHHHHHhcccc--chHhhccc--CC-CcchhhhHHHHHHHHHHHHHHHHHHHHhcc----ccccHHHHH
Confidence            32     222233333332222  23345563  22 223345666899999999999998887732    134568999


Q ss_pred             HHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCc-ccccccCCCchH
Q 009887          292 TLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAPDSV-VEEFHLARLPYL  370 (523)
Q Consensus       292 ~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~~~-~~~~~l~~lp~l  370 (523)
                      .+++ ..+++...+++|+....+.++|||+.||+.|.+|++++|++|||+++++++|+.+++|.+.. ++.+++++||+|
T Consensus       258 ~l~~-~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL  336 (486)
T KOG0684|consen  258 SLME-KYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLL  336 (486)
T ss_pred             HHHH-HhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHH
Confidence            9988 44555789999999999999999999999999999999999999999999999999998765 899999999999


Q ss_pred             HHHHHHhhcCCCCCCCcCccccCCCcccCC----cccCCCCEEEEechhhccCCCCCCCCCCCCCCcccccccCCCCCC-
Q 009887          371 EAIVKEALRLHPPAPLLITRRPSATSNLSG----YTIPKGSTIFINAWAIQTNPEVWENPQDFRPDRFLEDVKIGDFQG-  445 (523)
Q Consensus       371 ~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g----~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeRwl~~~~~~~~~~-  445 (523)
                      ++||+|||||+||.+... |.+.+|+++.+    |.||+|..|.++++.+|+||++|+||++|+|+||++++.+....+ 
T Consensus       337 ~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~  415 (486)
T KOG0684|consen  337 DSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGE  415 (486)
T ss_pred             HHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccc
Confidence            999999999999888755 99999999965    999999999999999999999999999999999997644332222 


Q ss_pred             -CcceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceeeeeccCC
Q 009887          446 -NNFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAVIPTPRS  515 (523)
Q Consensus       446 -~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  515 (523)
                       -...|+|||+|.|.|||+.||.+|+|.++..+|++||+++.++ +.+..+...++..|..+++|+.+.|+
T Consensus       416 kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  416 KLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDYSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             cccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCHHHhhcCCCCCceEEEeecC
Confidence             3345699999999999999999999999999999999999987 44444556779999999999999986


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.7e-68  Score=528.93  Aligned_cols=438  Identities=18%  Similarity=0.242  Sum_probs=338.1

Q ss_pred             CCccccccccCccHHHHHHHHHHHhC-CeEEEecCCeeEEEeCCHHHHHHHHHhcCccccCCCch-HHHHHhhcCCcccc
Q 009887           61 LPLVGNFLSLEPNLHHYFGKLSQIYG-PIFKLHLGSKLCIVIGSPSLAKQVLKEHDVVFANRDLP-AAASVLAYGGMSIA  138 (523)
Q Consensus        61 ~p~~G~~~~~~~~~~~~~~~~~~kyG-~v~~v~~~~~~~vvv~dp~~i~~il~~~~~~f~~~~~~-~~~~~~~~~~~~~~  138 (523)
                      .++.|++.....+...++..+.++++ .+++++.++.  ++++||+.+++|+..+...|.+.... .......++++...
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~gi~~~  126 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGIFNV  126 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCceeec
Confidence            45678887755567888878888887 6788876664  89999999999998775566654332 23334455666666


Q ss_pred             CCCcHHHHHHHHHHhhcchhhHHHhH--HHHHHHHHHHHHHHhc----cCCCceehHHHHHHHHHHHHHHHHhcccccCC
Q 009887          139 ASPEWPKLRQVLVRETMSNTSINASS--AIRRQAVLRSMKDVSG----RVGSPIKLRELMFLTFLDVATRMLWGASVRGE  212 (523)
Q Consensus       139 ~g~~w~~~R~~~~~~~f~~~~l~~~~--~~~~~~~~~l~~~l~~----~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~  212 (523)
                      +|+.|+++||.+. +.|+..+++.+.  +.+.+..+.++..+.+    .++.++|+.+++..+++|+++.++||.+++..
T Consensus       127 ~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~l  205 (502)
T PLN02426        127 DGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGCL  205 (502)
T ss_pred             CcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCccc
Confidence            9999999999996 999999988764  5666777777777754    22467999999999999999999999998755


Q ss_pred             CCchHHHHHHHHHHHHHHHhCCCCcchhhcc---cccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCCcCCCCCCccH
Q 009887          213 DWDPIAIQFRELIEAMFQLLGSGGLSDLFPL---LARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQDRNEGKSSKDF  289 (523)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~---l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~  289 (523)
                      +.+....++.++++......... ....+|+   +.++.+.+..++..++.+.+.+++.++++++++..    .....|+
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~----~~~~~dl  280 (502)
T PLN02426        206 ELSLPISEFADAFDTASKLSAER-AMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG----FSASKDL  280 (502)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc----cCCcchH
Confidence            32111233444444432211100 0011121   11111223346677888889999999998776521    1235699


Q ss_pred             HHHHHHHhhcCCCCCCHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCC-cccccccCCCc
Q 009887          290 LQTLLELQQQGDYSLSTDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAPDS-VVEEFHLARLP  368 (523)
Q Consensus       290 l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~~-~~~~~~l~~lp  368 (523)
                      ++.+++..      .+++++.+++..+++||+|||+++++|++|+|++||++|+|+++||+++++.+. .++++++++||
T Consensus       281 l~~ll~~~------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~Lp  354 (502)
T PLN02426        281 LSRFMASI------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMH  354 (502)
T ss_pred             HHHHHhcC------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcCh
Confidence            99998743      267899999999999999999999999999999999999999999999987543 67999999999


Q ss_pred             hHHHHHHHhhcCCCCCCCcCccccCCCccc-CCcccCCCCEEEEechhhccCCCCC-CCCCCCCCCcccccccCCCCCCC
Q 009887          369 YLEAIVKEALRLHPPAPLLITRRPSATSNL-SGYTIPKGSTIFINAWAIQTNPEVW-ENPQDFRPDRFLEDVKIGDFQGN  446 (523)
Q Consensus       369 ~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~PeRwl~~~~~~~~~~~  446 (523)
                      ||+|||+||||++|+++... |.+.+|..+ +|+.||+||.|.++++++||||++| +||++|+||||++++.  .....
T Consensus       355 Yl~avi~EtLRl~p~v~~~~-r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~--~~~~~  431 (502)
T PLN02426        355 YLHAALYESMRLFPPVQFDS-KFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV--FVPEN  431 (502)
T ss_pred             HHHHHHHHHHhCCCCCCCcc-eeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC--cCCCC
Confidence            99999999999999999865 999988887 9999999999999999999999999 9999999999997321  11223


Q ss_pred             cceeeecCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceeeeeccCC
Q 009887          447 NFNYLPFGSGRRVCPGIPLAEKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAVIPTPRS  515 (523)
Q Consensus       447 ~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  515 (523)
                      +..++|||+|+|.|+|++||++|++++++.|+++|+|++.++.........+.++.++.+++|++++|.
T Consensus       432 ~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        432 PFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             CcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence            457999999999999999999999999999999999998643221112234677889999999999984


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=8.9e-60  Score=459.08  Aligned_cols=402  Identities=17%  Similarity=0.250  Sum_probs=294.1

Q ss_pred             CCCCCCCCCCCCCcccccccc-----CccHHHHHHHHHHHhCC-eEEEecCCeeE-------EEeCCHHHHHHHHHh---
Q 009887           50 STPPLPPGPRPLPLVGNFLSL-----EPNLHHYFGKLSQIYGP-IFKLHLGSKLC-------IVIGSPSLAKQVLKE---  113 (523)
Q Consensus        50 ~~~~~~pgP~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~-v~~v~~~~~~~-------vvv~dp~~i~~il~~---  113 (523)
                      .+.+.|||+.++|++|+.+++     ..++..++.+.++|||+ ||+++++|.|+       |+++||++++.+|.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            345679999999999999864     45668999999999998 99999988666       999999999999985   


Q ss_pred             -cCccccCCCchHHHHHhhcC----CccccCCCcHHHHHHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhc--cCCCce
Q 009887          114 -HDVVFANRDLPAAASVLAYG----GMSIAASPEWPKLRQVLVRETMSNTSINASSAIRRQAVLRSMKDVSG--RVGSPI  186 (523)
Q Consensus       114 -~~~~f~~~~~~~~~~~~~~~----~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~--~~~~~v  186 (523)
                       ++..|..... .... +.+.    .....+|+.|+++|+++. ++|+ ..++.+.+.+.+.+.++++.|..  ..+.++
T Consensus        94 ~~~~~~~~~~~-~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~v  169 (480)
T PLN02648         94 DKRDVFTGTYM-PSTA-FTGGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKA  169 (480)
T ss_pred             cccccceeeec-cCcc-ccCCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCc
Confidence             4434443322 2223 3433    333348999999999997 8999 57788999999999999999964  345579


Q ss_pred             ehHHHHHHHHHHHHHHHHhcccccCCCCchHHHHHHHHHHHHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHH
Q 009887          187 KLRELMFLTFLDVATRMLWGASVRGEDWDPIAIQFRELIEAMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRI  266 (523)
Q Consensus       187 d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~  266 (523)
                      |+.+.+..+++|++++++||.+.+..+   ....+..........       ..+|....               .+...
T Consensus       170 dv~~~~~~lt~~vi~~~lfG~~~~~~~---l~~~~~~~~~~~~~~-------~~~p~~~~---------------~l~~~  224 (480)
T PLN02648        170 EFNDPLDQMAFNFLCKALTGKDPSETA---LGSDGPALIQKWLAL-------QLAPLAST---------------GLPHV  224 (480)
T ss_pred             cccchHHHHHHHHHHHHHcCCCcchhh---hccchhHHHHHHHHH-------HhhHHHHc---------------CchHH
Confidence            999999999999999999998664421   111111122211110       00111000               00011


Q ss_pred             HHHhhcCCCCCCCcCCCCCCccHH-------HHHHHHhhcCCCCCCHHHHHHHHHH-HhhccccchHHHHHHHHHHHhhC
Q 009887          267 FESLLRPGQTGQDRNEGKSSKDFL-------QTLLELQQQGDYSLSTDQIKAMFLD-MAIGSTDTTSITVEWAMTELLHK  338 (523)
Q Consensus       267 ~~~~i~~~~~~~~~~~~~~~~d~l-------~~ll~~~~~~~~~l~~~~i~~~~~~-~~~AG~~tta~~l~~~l~~L~~~  338 (523)
                      +++.+.++.............+++       +.++....+.  +++++|+.++++. +.+++++|++++++|++++|++|
T Consensus       225 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~--~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~  302 (480)
T PLN02648        225 LEELLLHTFPLPFFLVKSDYDKLYDFFRASATEALDLAEKF--GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRA  302 (480)
T ss_pred             HHHHhhcccCCchhhhhccHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC
Confidence            111111110000000000111222       2444444332  4999999998875 44667778888999999999999


Q ss_pred             hH-HHHHHHHHHHHhcCC-CCcccccccCCCchHHHHHHHhhcCCCCCCCcCccccCCCcccC----CcccCCCCEEEEe
Q 009887          339 PE-LMRKARNELEQVVAP-DSVVEEFHLARLPYLEAIVKEALRLHPPAPLLITRRPSATSNLS----GYTIPKGSTIFIN  412 (523)
Q Consensus       339 Pe-~~~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~----g~~ip~g~~v~~~  412 (523)
                      |+ +|+|+++|++++++. +..++++++++||||++||+|+||++|+++... |.+.+|++++    ||.||+|+.|+++
T Consensus       303 p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~g~~IpkG~~V~~~  381 (480)
T PLN02648        303 GEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDAAFEIKKGEMLFGY  381 (480)
T ss_pred             CHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCceEEECCCCEEEEC
Confidence            95 999999999999863 356899999999999999999999999999865 8889999995    7999999999999


Q ss_pred             chhhccCCCCCCCCCCCCCCcccccccCCCCCCCcceeee---------cCCCCCCCCCHHHHHHHHHHHHHHHHhhcc-
Q 009887          413 AWAIQTNPEVWENPQDFRPDRFLEDVKIGDFQGNNFNYLP---------FGSGRRVCPGIPLAEKIVPHVLANLLHLFE-  482 (523)
Q Consensus       413 ~~~~~~d~~~~~dp~~F~PeRwl~~~~~~~~~~~~~~~~~---------Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~-  482 (523)
                      .+.+||||++|+||++||||||+++....     ...+++         ||+|+|.|+|++||++|++++++.|+++|+ 
T Consensus       382 ~~~~hrdp~~~~dP~~F~PeRf~~~~~~~-----~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~  456 (480)
T PLN02648        382 QPLVTRDPKVFDRPEEFVPDRFMGEEGEK-----LLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDS  456 (480)
T ss_pred             hHHHhCCcccCCCcceeCCCCCCCCCccc-----cccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCE
Confidence            99999999999999999999998642211     112333         477889999999999999999999999998 


Q ss_pred             ccCCCC
Q 009887          483 WSLPEE  488 (523)
Q Consensus       483 ~~~~~~  488 (523)
                      |++.++
T Consensus       457 ~~l~~~  462 (480)
T PLN02648        457 FEIEVD  462 (480)
T ss_pred             EeecCC
Confidence            998654


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2.8e-55  Score=423.02  Aligned_cols=380  Identities=26%  Similarity=0.403  Sum_probs=306.1

Q ss_pred             HHHHHHHHHHHhCCeEEEecCCee--EEEeCCHHHHHHHHHhcCccccCCCchHH----HHHhhcCC-ccccCCCcHHHH
Q 009887           74 LHHYFGKLSQIYGPIFKLHLGSKL--CIVIGSPSLAKQVLKEHDVVFANRDLPAA----ASVLAYGG-MSIAASPEWPKL  146 (523)
Q Consensus        74 ~~~~~~~~~~kyG~v~~v~~~~~~--~vvv~dp~~i~~il~~~~~~f~~~~~~~~----~~~~~~~~-~~~~~g~~w~~~  146 (523)
                      +......+.+.||.+++++..+.-  .++++++++++++++++. .+++......    .....+.+ ....+|+.|+++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            556667788899999888876544  799999999999999875 2222211111    22333333 333499999999


Q ss_pred             HHHHHHhhcchhhHHHhHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHHHHhcccccCCCCchHHHHHHHHHH
Q 009887          147 RQVLVRETMSNTSINASSAIRRQAVLRSMKDVSGRVGSPIKLRELMFLTFLDVATRMLWGASVRGEDWDPIAIQFRELIE  226 (523)
Q Consensus       147 R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~  226 (523)
                      |+++. +.|+++.++.+.+.+.+.++++++.+ ..+ +.+++.+.+..+++++++ .+||.+.+..      ..+.....
T Consensus       103 Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~------~~~~~~~~  172 (411)
T COG2124         103 RKLLA-PAFTPRALRGYRPLIREIADRLLDDL-WQG-GADLVLDFAAELTLRVIA-ELLGVPLEDR------PQLLRWSD  172 (411)
T ss_pred             HHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-ccC-CchhHHHHhhhhhHHHHH-HHhCCCHHHH------HHHHHHHH
Confidence            99997 99999999999999999999999999 433 788999999999999999 9999886443      22222222


Q ss_pred             HHHHHhCCCCcchhhcccccccccchhHHHHHHHHHHHHHHHHhhcCCCCCCCcCCCCCCccHHHHHHHHhhcCCCCCCH
Q 009887          227 AMFQLLGSGGLSDLFPLLARFDLQGHQSKAKKLTARFDRIFESLLRPGQTGQDRNEGKSSKDFLQTLLELQQQGDYSLST  306 (523)
Q Consensus       227 ~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~  306 (523)
                      ......        .|...   +.....+..++...+.++++++|++++.       ...+|+++.|+.+.++++..+++
T Consensus       173 ~~~~~~--------~~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~-------~~~~dlls~l~~a~~~~~~~lsd  234 (411)
T COG2124         173 ALLLRL--------DPDLG---PEEPWRRARAARRELDAYLRALIAERRA-------APRDDLLSLLLSAEDDGGGRLSD  234 (411)
T ss_pred             HHHhcc--------CcccC---CcccHHHHHHHHHHHHHHHHHHHHHhcc-------CCcccHHHHHHHHhhCCCCcCCH
Confidence            222110        01111   2223567788999999999999998874       55679999999988876557999


Q ss_pred             HHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCcccccccCCCchHHHHHHHhhcCCCCCCC
Q 009887          307 DQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVVAPDSVVEEFHLARLPYLEAIVKEALRLHPPAPL  386 (523)
Q Consensus       307 ~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~  386 (523)
                      +|+.++++.+++||+|||+++++|+++.|++||++++++++|.+.                ||++++|+|+||++|+++.
T Consensus       235 ~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~  298 (411)
T COG2124         235 DEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPL  298 (411)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhc
Confidence            999999999999999999999999999999999999999998875                7999999999999999999


Q ss_pred             cCccccCCCcccCCcccCCCCEEEEechhhccCCCCCCCCCCCCCCcccccccCCCCCCCcceeeecCCCCCCCCCHHHH
Q 009887          387 LITRRPSATSNLSGYTIPKGSTIFINAWAIQTNPEVWENPQDFRPDRFLEDVKIGDFQGNNFNYLPFGSGRRVCPGIPLA  466 (523)
Q Consensus       387 ~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeRwl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A  466 (523)
                       .+|++++|++++|+.||+|+.|+++++.+||||++|+||++|||+||.            ..|+|||+|+|.|+|..||
T Consensus       299 -~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------------~~~l~FG~G~H~ClG~~lA  365 (411)
T COG2124         299 -ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------------NAHLPFGGGPHRCLGAALA  365 (411)
T ss_pred             -cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------------CCCcCCCCCCccccCHHHH
Confidence             789999999999999999999999999999999999999999999995            3799999999999999999


Q ss_pred             HHHHHHHHHHHHhhccccCCCCCCCCccccccceeccCCceeeeeccC
Q 009887          467 EKIVPHVLANLLHLFEWSLPEETKLDLSDKLLMALKKSEPLAVIPTPR  514 (523)
Q Consensus       467 ~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  514 (523)
                      ++|++++++.++++|++....+ + . ......+..+..+..+.++.|
T Consensus       366 ~~E~~~~l~~ll~r~~~~~~~~-~-~-~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         366 RLELKVALAELLRRFPLLLLAE-P-P-PLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             HHHHHHHHHHHHHhCchhhcCC-C-C-CccccccccCCCcceeeeecC
Confidence            9999999999999999887665 2 1 122233344555555555544


No 33 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=73.75  E-value=3.8  Score=32.48  Aligned_cols=14  Identities=14%  Similarity=0.026  Sum_probs=5.7

Q ss_pred             hhCCCCCCCCCCCC
Q 009887           44 IKKPTRSTPPLPPG   57 (523)
Q Consensus        44 ~~~~~~~~~~~~pg   57 (523)
                      .+++.++......|
T Consensus        23 ~rRR~r~G~~P~~g   36 (130)
T PF12273_consen   23 NRRRRRRGLQPIYG   36 (130)
T ss_pred             HHHHhhcCCCCcCC
Confidence            33333434444444


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=65.29  E-value=23  Score=22.19  Aligned_cols=44  Identities=16%  Similarity=0.151  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 009887          307 DQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELE  350 (523)
Q Consensus       307 ~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~  350 (523)
                      -++...+..++-.|-|..+-.++--+....-||+...++..|++
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            34556667777778888888888888888889999999888863


No 35 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=58.12  E-value=7.1  Score=25.70  Aligned_cols=7  Identities=43%  Similarity=1.037  Sum_probs=5.7

Q ss_pred             CCCcccc
Q 009887          430 RPDRFLE  436 (523)
Q Consensus       430 ~PeRwl~  436 (523)
                      ||||||.
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            7888885


No 36 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=53.74  E-value=13  Score=24.18  Aligned_cols=26  Identities=15%  Similarity=0.355  Sum_probs=20.1

Q ss_pred             HHHHHHHhhChHHHHHHHHHHHHhcC
Q 009887          329 EWAMTELLHKPELMRKARNELEQVVA  354 (523)
Q Consensus       329 ~~~l~~L~~~Pe~~~~lr~Ei~~~~~  354 (523)
                      .-++.+|.+||++.+++.+.=.+.+|
T Consensus         3 Q~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    3 QEIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHHChHHHHHHHcCCeeEec
Confidence            34678999999999999985555444


No 37 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=49.14  E-value=29  Score=24.68  Aligned_cols=6  Identities=33%  Similarity=0.766  Sum_probs=3.3

Q ss_pred             CCCccc
Q 009887           60 PLPLVG   65 (523)
Q Consensus        60 ~~p~~G   65 (523)
                      +-|++|
T Consensus        66 YrPvI~   71 (94)
T PF05393_consen   66 YRPVIG   71 (94)
T ss_pred             cccccc
Confidence            345666


No 38 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=42.90  E-value=22  Score=27.95  Aligned_cols=23  Identities=17%  Similarity=0.363  Sum_probs=17.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHhh
Q 009887          458 RVCPGIPLAEKIVPHVLANLLHL  480 (523)
Q Consensus       458 r~C~G~~~A~~~~~~~l~~ll~~  480 (523)
                      ..|.|++||+.++-.+++.|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            58999999999999999999974


No 39 
>PTZ00370 STEVOR; Provisional
Probab=41.38  E-value=33  Score=30.96  Aligned_cols=19  Identities=32%  Similarity=0.691  Sum_probs=9.4

Q ss_pred             HHHHHHHHHHHHHHHhhCC
Q 009887           29 ILLAATFAISCYAWLIKKP   47 (523)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~   47 (523)
                      +++++++++.+|.|+++||
T Consensus       264 llil~vvliilYiwlyrrR  282 (296)
T PTZ00370        264 LLILAVVLIILYIWLYRRR  282 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            3344444445556666553


No 40 
>PRK06789 flagellar motor switch protein; Validated
Probab=39.80  E-value=22  Score=24.77  Aligned_cols=39  Identities=15%  Similarity=0.207  Sum_probs=32.7

Q ss_pred             HHHhhcCCCCCCCcCccccCCCccc--CCcccCCCCEEEEe
Q 009887          374 VKEALRLHPPAPLLITRRPSATSNL--SGYTIPKGSTIFIN  412 (523)
Q Consensus       374 i~EtlRl~p~~~~~~~R~~~~~~~i--~g~~ip~g~~v~~~  412 (523)
                      ++|-+.+.+..-.-+.|.+.++..+  +|..|.+|..|.++
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            6899999998877777888777665  99999999998775


No 41 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=35.25  E-value=82  Score=20.09  Aligned_cols=36  Identities=17%  Similarity=0.199  Sum_probs=25.6

Q ss_pred             HHHHHHHhCCeEEEecC----CeeEEEeCCHHHHHHHHHh
Q 009887           78 FGKLSQIYGPIFKLHLG----SKLCIVIGSPSLAKQVLKE  113 (523)
Q Consensus        78 ~~~~~~kyG~v~~v~~~----~~~~vvv~dp~~i~~il~~  113 (523)
                      +.+..++||+|-.+.+.    +.-.|-..+++.++.....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            35678899999887754    3345677799998888763


No 42 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=34.76  E-value=99  Score=24.36  Aligned_cols=42  Identities=14%  Similarity=0.294  Sum_probs=32.4

Q ss_pred             ccHHHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcC
Q 009887           72 PNLHHYFGKLSQIYGPIFKLHLGSKLCIVIGSPSLAKQVLKEHD  115 (523)
Q Consensus        72 ~~~~~~~~~~~~kyG~v~~v~~~~~~~vvv~dp~~i~~il~~~~  115 (523)
                      .+....+++|.++||.+--.  .+...+...|++.++++..++.
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~~  115 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADPE  115 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhChh
Confidence            45678899999999987432  2456778889999999987754


No 43 
>PF01277 Oleosin:  Oleosin;  InterPro: IPR000136 Oleosins [] are the proteinaceous components of plants' lipid storage bodies called oil bodies. Oil bodies are small droplets (0.2 to 1.5 mu-m in diameter) containing mostly triacylglycerol that are surrounded by a phospholipid/ oleosin annulus. Oleosins may have a structural role in stabilising the lipid body during dessication of the seed, by preventing coalescence of the oil. They may also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth. Oleosins are found in the monolayer lipid/ water interface of oil bodies and probably interact with both the lipid and phospholipid moieties. Oleosins are proteins of 16 Kd to 24 Kd and are composed of three domains: an N-terminal hydrophilic region of variable length (from 30 to 60 residues); a central hydrophobic domain of about 70 residues and a C-terminal amphipathic region of variable length (from 60 to 100 residues). The central hydrophobic domain is proposed to be made up of beta-strand structure and to interact with the lipids []. It is the only domain whose sequence is conserved.; GO: 0012511 monolayer-surrounded lipid storage body, 0016021 integral to membrane
Probab=34.66  E-value=1.3e+02  Score=23.24  Aligned_cols=77  Identities=22%  Similarity=0.317  Sum_probs=40.1

Q ss_pred             hhHHHHhhHHhhhhhhhhhhHHHHHHHHHHHH--------------HHHHHHHhhCCCCCCCCCCCCCCCCCcccccccc
Q 009887            5 LIHNFVGLFFEFNERTITSSRVIQILLAATFA--------------ISCYAWLIKKPTRSTPPLPPGPRPLPLVGNFLSL   70 (523)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~pgP~~~p~~G~~~~~   70 (523)
                      +.-+.++|.+..+=..+.|+-+.+..+.+.++              +..+.|.+++   -+...|+||...   .....-
T Consensus        26 L~gtvigL~vatPLfvifSPVlVPaai~~~l~~~Gfl~sg~~g~~~ls~lsW~~~y---~rg~~~~~~~q~---d~Ak~r   99 (118)
T PF01277_consen   26 LAGTVIGLAVATPLFVIFSPVLVPAAIAIGLAVAGFLTSGAFGLTALSSLSWMYNY---FRGRHPPGPDQL---DYAKRR   99 (118)
T ss_pred             HHHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH---hccCCCCCCccH---HHHHHH
Confidence            45566677776666666676666654333221              2223444433   222346665422   222222


Q ss_pred             CccHHHHHHHHHHHhCC
Q 009887           71 EPNLHHYFGKLSQIYGP   87 (523)
Q Consensus        71 ~~~~~~~~~~~~~kyG~   87 (523)
                      -.+...+..+-.++||.
T Consensus       100 i~d~a~~v~~kake~gq  116 (118)
T PF01277_consen  100 IADTASYVGQKAKEVGQ  116 (118)
T ss_pred             HHHHHHHHHHHHHHhCc
Confidence            34555667777788873


No 44 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=33.30  E-value=17  Score=28.83  Aligned_cols=25  Identities=4%  Similarity=-0.069  Sum_probs=10.4

Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCCC
Q 009887           28 QILLAATFAISCYAWLIKKPTRSTP   52 (523)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~   52 (523)
                      +++++++++++++..+.+...|++.
T Consensus         4 l~~iii~~i~l~~~~~~~~~rRR~r   28 (130)
T PF12273_consen    4 LFAIIIVAILLFLFLFYCHNRRRRR   28 (130)
T ss_pred             eHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            3333334444444444544433333


No 45 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=32.21  E-value=1.9e+02  Score=20.82  Aligned_cols=49  Identities=14%  Similarity=0.154  Sum_probs=41.0

Q ss_pred             CHHHHHHHHHHHhhccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhc
Q 009887          305 STDQIKAMFLDMAIGSTDTTSITVEWAMTELLHKPELMRKARNELEQVV  353 (523)
Q Consensus       305 ~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~Pe~~~~lr~Ei~~~~  353 (523)
                      ..+.........++-=+..++....-.+.+-++||+..+++.+.+..-+
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            4455666677788888999999999999999999999999999887543


No 46 
>PHA03049 IMV membrane protein; Provisional
Probab=31.83  E-value=1.5e+02  Score=19.98  Aligned_cols=9  Identities=33%  Similarity=0.615  Sum_probs=3.5

Q ss_pred             CCCCCCCCC
Q 009887           49 RSTPPLPPG   57 (523)
Q Consensus        49 ~~~~~~~pg   57 (523)
                      +.....||-
T Consensus        27 ~~~q~~~p~   35 (68)
T PHA03049         27 TTTSQNPPS   35 (68)
T ss_pred             cccCCCCCC
Confidence            333334443


No 47 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=29.70  E-value=85  Score=18.58  Aligned_cols=18  Identities=22%  Similarity=0.421  Sum_probs=12.1

Q ss_pred             HHHHHHh-hChHHHHHHHH
Q 009887          330 WAMTELL-HKPELMRKARN  347 (523)
Q Consensus       330 ~~l~~L~-~~Pe~~~~lr~  347 (523)
                      ..+..++ +|||+++.++.
T Consensus        17 ~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   17 SLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHhChhHHHHHHh
Confidence            3344444 89999888765


No 48 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=28.76  E-value=36  Score=24.41  Aligned_cols=20  Identities=15%  Similarity=0.512  Sum_probs=17.3

Q ss_pred             HHHHHHHHHHHhhccccCCC
Q 009887          468 KIVPHVLANLLHLFEWSLPE  487 (523)
Q Consensus       468 ~~~~~~l~~ll~~f~~~~~~  487 (523)
                      .-|+-++..+|+-|||++++
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            34789999999999999865


No 49 
>PHA03162 hypothetical protein; Provisional
Probab=27.00  E-value=42  Score=26.08  Aligned_cols=25  Identities=20%  Similarity=0.359  Sum_probs=20.6

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHH
Q 009887          454 GSGRRVCPGIPLAEKIVPHVLANLL  478 (523)
Q Consensus       454 g~G~r~C~G~~~A~~~~~~~l~~ll  478 (523)
                      ++|.+.|||+...+-++-.=|+.|=
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kLq   26 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKLQ   26 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHHH
Confidence            4699999999999888877777663


No 50 
>PF15183 MRAP:  Melanocortin-2 receptor accessory protein family
Probab=26.61  E-value=2.3e+02  Score=20.21  Aligned_cols=28  Identities=7%  Similarity=0.038  Sum_probs=18.5

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHhhCC
Q 009887           20 TITSSRVIQILLAATFAISCYAWLIKKP   47 (523)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~   47 (523)
                      .+....|+.+.+.++++++++.+..|..
T Consensus        37 sIVI~FWv~LA~FV~~lF~iL~~ms~sg   64 (90)
T PF15183_consen   37 SIVIAFWVSLAAFVVFLFLILLYMSWSG   64 (90)
T ss_pred             eeehhHHHHHHHHHHHHHHHHHHHhccC
Confidence            3455667777777777777777766654


No 51 
>PF05545 FixQ:  Cbb3-type cytochrome oxidase component FixQ;  InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=25.84  E-value=1.7e+02  Score=18.33  Aligned_cols=15  Identities=20%  Similarity=0.386  Sum_probs=6.4

Q ss_pred             HHHHHHHHHHHhhCC
Q 009887           33 ATFAISCYAWLIKKP   47 (523)
Q Consensus        33 ~~~~~~~~~~~~~~~   47 (523)
                      .++.+.++.|.++.+
T Consensus        19 ~~~F~gi~~w~~~~~   33 (49)
T PF05545_consen   19 FVFFIGIVIWAYRPR   33 (49)
T ss_pred             HHHHHHHHHHHHccc
Confidence            333333445555443


No 52 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=25.60  E-value=2.9e+02  Score=20.83  Aligned_cols=60  Identities=20%  Similarity=0.200  Sum_probs=38.2

Q ss_pred             CCCCCCCCCCCccccccccCccHHHHHHHHHHHhCCeEEEecC------CeeEEEeCCHHHHHHHHHh
Q 009887           52 PPLPPGPRPLPLVGNFLSLEPNLHHYFGKLSQIYGPIFKLHLG------SKLCIVIGSPSLAKQVLKE  113 (523)
Q Consensus        52 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~v~~~------~~~~vvv~dp~~i~~il~~  113 (523)
                      .+.||--..+-++-|++.  .--.+-+-++.-+||+|..+++|      |.-+||-.|-..++....+
T Consensus        11 ~rlppevnriLyirNLp~--~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   11 IRLPPEVNRILYIRNLPF--KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCCChhhheeEEEecCCc--cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            344554444555555432  11234456788899999999988      4556887787777777655


No 53 
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=25.51  E-value=91  Score=25.50  Aligned_cols=39  Identities=18%  Similarity=0.255  Sum_probs=29.8

Q ss_pred             CccHHHHHHHHHHHhC-CeEEEecCCe-eE---EEeCCHHHHHH
Q 009887           71 EPNLHHYFGKLSQIYG-PIFKLHLGSK-LC---IVIGSPSLAKQ  109 (523)
Q Consensus        71 ~~~~~~~~~~~~~kyG-~v~~v~~~~~-~~---vvv~dp~~i~~  109 (523)
                      ++...+..+++.+++| +|.++.++|. |-   ++++||-.+--
T Consensus       153 GGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAGv  196 (218)
T COG1707         153 GGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAGV  196 (218)
T ss_pred             cchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhhh
Confidence            5677889999999999 9999998663 22   67888865443


No 54 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=24.77  E-value=44  Score=28.71  Aligned_cols=42  Identities=21%  Similarity=0.329  Sum_probs=31.7

Q ss_pred             CchHHHHHHHhhcCCCCCCCcCcc-ccCCCcccCCcccCCCCEEEE
Q 009887          367 LPYLEAIVKEALRLHPPAPLLITR-RPSATSNLSGYTIPKGSTIFI  411 (523)
Q Consensus       367 lp~l~a~i~EtlRl~p~~~~~~~R-~~~~~~~i~g~~ip~g~~v~~  411 (523)
                      -....|||.|++-.......   | ...+|+.++|..||+||.+.-
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~v---rlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSRV---RLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCEE---EEEEcCceEECCEEeCCCCEEEE
Confidence            44567899999877754432   3 346888999999999999875


No 55 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=24.38  E-value=1.1e+02  Score=22.03  Aligned_cols=16  Identities=25%  Similarity=0.671  Sum_probs=14.5

Q ss_pred             hHHHHHHHHHHHHhcC
Q 009887          339 PELMRKARNELEQVVA  354 (523)
Q Consensus       339 Pe~~~~lr~Ei~~~~~  354 (523)
                      |++.+.+|+||.+|+.
T Consensus        36 pd~l~~Lr~eIl~VI~   51 (88)
T COG0851          36 PDYLEQLRKEILEVIS   51 (88)
T ss_pred             cchHHHHHHHHHHHHH
Confidence            8999999999999874


No 56 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=23.95  E-value=1.9e+02  Score=20.71  Aligned_cols=39  Identities=5%  Similarity=0.080  Sum_probs=28.7

Q ss_pred             HHHHHHHHHHhCCe---EEEecCCeeEEEeCC-----HHHHHHHHHh
Q 009887           75 HHYFGKLSQIYGPI---FKLHLGSKLCIVIGS-----PSLAKQVLKE  113 (523)
Q Consensus        75 ~~~~~~~~~kyG~v---~~v~~~~~~~vvv~d-----p~~i~~il~~  113 (523)
                      .+..++++++|.++   ++|+.++.+-+-|++     .+.+.+++..
T Consensus        23 ~EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLqE   69 (81)
T PRK10597         23 GELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQE   69 (81)
T ss_pred             HHHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHHH
Confidence            35567888999876   899988888888754     3666666653


No 57 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=23.87  E-value=2.6e+02  Score=21.31  Aligned_cols=11  Identities=27%  Similarity=0.190  Sum_probs=7.6

Q ss_pred             CCCcccccccc
Q 009887           60 PLPLVGNFLSL   70 (523)
Q Consensus        60 ~~p~~G~~~~~   70 (523)
                      .-|+.||+...
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            47788887554


No 58 
>PF06024 DUF912:  Nucleopolyhedrovirus protein of unknown function (DUF912);  InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=23.07  E-value=42  Score=25.17  Aligned_cols=7  Identities=14%  Similarity=0.349  Sum_probs=2.5

Q ss_pred             HHHHHHH
Q 009887           36 AISCYAW   42 (523)
Q Consensus        36 ~~~~~~~   42 (523)
                      +++++++
T Consensus        78 ly~IyYF   84 (101)
T PF06024_consen   78 LYAIYYF   84 (101)
T ss_pred             HhhheEE
Confidence            3333333


No 59 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=22.80  E-value=38  Score=21.68  Aligned_cols=11  Identities=45%  Similarity=0.960  Sum_probs=9.0

Q ss_pred             eecCCCCCCCC
Q 009887          451 LPFGSGRRVCP  461 (523)
Q Consensus       451 ~~Fg~G~r~C~  461 (523)
                      .+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            47999999883


No 60 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=21.57  E-value=4e+02  Score=26.50  Aligned_cols=39  Identities=13%  Similarity=0.284  Sum_probs=22.4

Q ss_pred             HHhCCeEEEecCCeeE-EEeCCHHHHHHHHHhcCccccCCC
Q 009887           83 QIYGPIFKLHLGSKLC-IVIGSPSLAKQVLKEHDVVFANRD  122 (523)
Q Consensus        83 ~kyG~v~~v~~~~~~~-vvv~dp~~i~~il~~~~~~f~~~~  122 (523)
                      -+||.|++-.+-++.+ |=+..++..+ =+.+..++|+...
T Consensus       221 Grfg~V~KaqL~~~~VAVKifp~~~kq-s~~~Ek~Iy~lp~  260 (534)
T KOG3653|consen  221 GRFGCVWKAQLDNRLVAVKIFPEQEKQ-SFQNEKNIYSLPG  260 (534)
T ss_pred             CccceeehhhccCceeEEEecCHHHHH-HHHhHHHHHhccC
Confidence            4688888776666655 3344444444 3444455666543


No 61 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=21.53  E-value=2.7e+02  Score=18.91  Aligned_cols=8  Identities=25%  Similarity=0.443  Sum_probs=2.9

Q ss_pred             HHHHHHHH
Q 009887           33 ATFAISCY   40 (523)
Q Consensus        33 ~~~~~~~~   40 (523)
                      +++++++|
T Consensus        13 aii~lIlY   20 (68)
T PF05961_consen   13 AIIGLILY   20 (68)
T ss_pred             HHHHHHHH
Confidence            33333333


No 62 
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=21.52  E-value=2.3e+02  Score=18.91  Aligned_cols=19  Identities=11%  Similarity=0.126  Sum_probs=8.5

Q ss_pred             HHHHHHHHHHHHHHHhhCC
Q 009887           29 ILLAATFAISCYAWLIKKP   47 (523)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~   47 (523)
                      +++..++.++++.+.++..
T Consensus        15 t~~~~l~fiavi~~ayr~~   33 (60)
T COG4736          15 TIAFTLFFIAVIYFAYRPG   33 (60)
T ss_pred             HHHHHHHHHHHHHHHhccc
Confidence            3333444444445555443


No 63 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=21.12  E-value=63  Score=25.21  Aligned_cols=21  Identities=29%  Similarity=0.406  Sum_probs=17.5

Q ss_pred             ccCCCcccCCcccCCCCEEEE
Q 009887          391 RPSATSNLSGYTIPKGSTIFI  411 (523)
Q Consensus       391 ~~~~~~~i~g~~ip~g~~v~~  411 (523)
                      ++++|.+++|..||+||.|..
T Consensus        72 I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   72 IAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             ecCCCcccCCeeecceEEEEE
Confidence            456789999999999998863


No 64 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=20.74  E-value=56  Score=28.18  Aligned_cols=20  Identities=30%  Similarity=0.873  Sum_probs=17.2

Q ss_pred             hhhccCCCCCCCCCCCCCCc
Q 009887          414 WAIQTNPEVWENPQDFRPDR  433 (523)
Q Consensus       414 ~~~~~d~~~~~dp~~F~PeR  433 (523)
                      +.-+.|+.+|.|.+.|+|-|
T Consensus       192 ~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccccCccccCCCC
Confidence            34488999999999999987


No 65 
>COG3954 PrkB Phosphoribulokinase [Energy production and conversion]
Probab=20.35  E-value=2.2e+02  Score=24.26  Aligned_cols=63  Identities=13%  Similarity=0.025  Sum_probs=34.6

Q ss_pred             hccccchHHHHHHHHHHHhhChHHHH----------HHHHHHHHhcCCCCcccc--cccCCCchHHHHHHHhhcC
Q 009887          318 IGSTDTTSITVEWAMTELLHKPELMR----------KARNELEQVVAPDSVVEE--FHLARLPYLEAIVKEALRL  380 (523)
Q Consensus       318 ~AG~~tta~~l~~~l~~L~~~Pe~~~----------~lr~Ei~~~~~~~~~~~~--~~l~~lp~l~a~i~EtlRl  380 (523)
                      .||..||+-+.--++-.+.-++.+.+          ..+.+|...-..++.+++  ...+.++.|+.++.|--|-
T Consensus        15 GAGTTTts~aFrKiF~~~~I~aa~iEGDsFHR~tRpeMd~~Irkar~~GrhisyFgpeANdf~~LE~~f~eYg~~   89 (289)
T COG3954          15 GAGTTTTSLAFRKIFAQLNIHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQS   89 (289)
T ss_pred             CCCcccHHHHHHHHHHhcCccHhhhccccccccCchhHHHHHHHHHHcCCcceecCccccchHHHHHHHHHhccc
Confidence            46777777666666666655544332          222233322222344443  3456788888888886543


Done!