Your job contains 1 sequence.
>009892
MRVALASTIKQNPLLLTISSFLYRPPTKTVSFRNIFTVNTTRNLGFLRCKATMSEQEPPR
PVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALD
NMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCED
YSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPP
KATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVS
GNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFND
DQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFL
SLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLLYPT
HVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIFFLYLI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009892
(523 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2199675 - symbol:AT1G22660 species:3702 "Arabi... 1364 2.1e-139 1
DICTYBASE|DDB_G0293504 - symbol:DDB_G0293504 "tRNA nucleo... 723 1.8e-71 1
CGD|CAL0004347 - symbol:orf19.4705 species:5476 "Candida ... 595 6.6e-58 1
SGD|S000000970 - symbol:CCA1 "ATP (CTP):tRNA-specific tRN... 590 2.2e-57 1
POMBASE|SPCC645.10 - symbol:SPCC645.10 "ATP(CTP) tRNA nuc... 558 5.4e-57 2
ASPGD|ASPL0000066964 - symbol:AN10924 species:162425 "Eme... 584 9.6e-57 1
GENEDB_PFALCIPARUM|PF11_0212 - symbol:PF11_0212 "hypothet... 532 1.4e-54 2
UNIPROTKB|Q8IIG2 - symbol:PF11_0212 "tRNA nucleotidyltran... 532 1.4e-54 2
POMBASE|SPAC1093.04c - symbol:SPAC1093.04c "tRNA nucleoti... 517 1.2e-49 1
DICTYBASE|DDB_G0271378 - symbol:DDB_G0271378 species:4468... 265 3.3e-33 3
TIGR_CMR|CHY_1949 - symbol:CHY_1949 "polyA polymerase fam... 214 5.8e-14 1
UNIPROTKB|Q7D4M2 - symbol:pcnB "PolyA polymerase" species... 203 3.3e-13 1
TIGR_CMR|GSU_1581 - symbol:GSU_1581 "polyA polymerase fam... 206 4.5e-13 1
TIGR_CMR|CBU_0286 - symbol:CBU_0286 "polyA polymerase" sp... 179 6.8e-11 2
UNIPROTKB|Q9KUC8 - symbol:VC_0594 "PolyA polymerase" spec... 174 1.1e-10 2
TIGR_CMR|VC_0594 - symbol:VC_0594 "polyA polymerase" spec... 174 1.1e-10 2
TIGR_CMR|GSU_3250 - symbol:GSU_3250 "polyA polymerase" sp... 179 1.4e-10 1
RGD|1308857 - symbol:Trnt1 "tRNA nucleotidyl transferase,... 174 4.4e-10 1
WB|WBGene00010089 - symbol:hpo-31 species:6239 "Caenorhab... 174 4.4e-10 1
UNIPROTKB|P0ABF1 - symbol:pcnB species:83333 "Escherichia... 166 4.7e-10 2
ZFIN|ZDB-GENE-040625-176 - symbol:trnt1 "tRNA nucleotidyl... 169 1.3e-09 1
MGI|MGI:1917297 - symbol:Trnt1 "tRNA nucleotidyl transfer... 167 2.6e-09 1
UNIPROTKB|Q96Q11 - symbol:TRNT1 "CCA tRNA nucleotidyltran... 165 4.4e-09 1
UNIPROTKB|F1SFL7 - symbol:TRNT1 "Uncharacterized protein"... 164 5.6e-09 1
UNIPROTKB|Q4K5Y6 - symbol:pcnB "Poly(A) polymerase" speci... 161 1.4e-08 1
UNIPROTKB|Q1RML6 - symbol:TRNT1 "tRNA nucleotidyl transfe... 159 2.0e-08 1
UNIPROTKB|E2R8M0 - symbol:TRNT1 "Uncharacterized protein"... 158 2.6e-08 1
UNIPROTKB|F1NMW8 - symbol:TRNT1 "Uncharacterized protein"... 136 2.8e-08 1
TIGR_CMR|SO_0872 - symbol:SO_0872 "polyA polymerase" spec... 158 3.1e-08 1
TIGR_CMR|CPS_4310 - symbol:CPS_4310 "polyA polymerase" sp... 157 4.0e-08 1
TIGR_CMR|DET_0409 - symbol:DET_0409 "polyA polymerase fam... 148 3.1e-07 1
FB|FBgn0037369 - symbol:CG2100 species:7227 "Drosophila m... 147 5.0e-07 1
TIGR_CMR|CJE_0880 - symbol:CJE_0880 "polyA polymerase fam... 124 1.4e-06 2
TAIR|locus:2010439 - symbol:AT1G28090 species:3702 "Arabi... 141 3.8e-06 2
TIGR_CMR|BA_1559 - symbol:BA_1559 "polyA polymerase" spec... 128 5.8e-06 2
UNIPROTKB|Q9KPC6 - symbol:cca "Multifunctional CCA protei... 123 2.8e-05 2
TIGR_CMR|VC_2446 - symbol:VC_2446 "tRNA nucleotidyltransf... 123 2.8e-05 2
TIGR_CMR|CHY_2440 - symbol:CHY_2440 "polyA polymerase/tRN... 118 8.1e-05 2
TIGR_CMR|GSU_2184 - symbol:GSU_2184 "polyA polymerase fam... 116 0.00016 2
TIGR_CMR|CPS_4215 - symbol:CPS_4215 "tRNA nucleotidyltran... 121 0.00016 2
UNIPROTKB|P06961 - symbol:cca "fused tRNA nucleotidyltran... 124 0.00019 2
UNIPROTKB|Q4K4W8 - symbol:cca "Multifunctional CCA protei... 107 0.00040 2
TIGR_CMR|NSE_0646 - symbol:NSE_0646 "polyA polymerase fam... 118 0.00056 1
>TAIR|locus:2199675 [details] [associations]
symbol:AT1G22660 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004810 "tRNA
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009630 "gravitropism"
evidence=RCA] InterPro:IPR002646 Pfam:PF01743 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0003723 GO:GO:0006396
HOGENOM:HOG000168085 GO:GO:0016779 EMBL:AF370489 EMBL:BT000361
IPI:IPI00517611 RefSeq:NP_173680.1 UniGene:At.17036
ProteinModelPortal:Q94K06 SMR:Q94K06 PRIDE:Q94K06
EnsemblPlants:AT1G22660.1 GeneID:838872 KEGG:ath:AT1G22660
KEGG:dosa:Os12t0171200-01 TAIR:At1g22660 InParanoid:Q94K06
OMA:RDKLLGK PhylomeDB:Q94K06 ProtClustDB:CLSN2681849
ArrayExpress:Q94K06 Genevestigator:Q94K06 Uniprot:Q94K06
Length = 605
Score = 1364 (485.2 bits), Expect = 2.1e-139, P = 2.1e-139
Identities = 280/465 (60%), Positives = 344/465 (73%)
Query: 68 DKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEF 127
+ IELTD E KIF LL+TLR+ NL+T LRVAGGWVRDKLLGK+ DIDIA+DNM GSEF
Sbjct: 82 ENIELTDKERKIFDRLLSTLRYCNLDTQLRVAGGWVRDKLLGKESDDIDIAIDNMSGSEF 141
Query: 128 ATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRI 187
K EYLS+ E G VI NPDQSKHLETA +++YD WIDFVNLR E+Y+ENSRI
Sbjct: 142 LDKFKEYLSSRDEEV-QGDTVIERNPDQSKHLETAKLRIYDQWIDFVNLRSEEYTENSRI 200
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDD 247
PTM+FGTA++DA+RRDLTINSLFYNIN+ +VEDLT RGI DLK GKIVTPLP KATFLDD
Sbjct: 201 PTMKFGTAKDDAFRRDLTINSLFYNINSGAVEDLTERGIDDLKSGKIVTPLPAKATFLDD 260
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
PLRVLRA+RFGARF F LDEELK+AA+S+EV+ AL KISRER+G EIDLM+SGN PV A
Sbjct: 261 PLRVLRAVRFGARFGFTLDEELKEAASSEEVRVALGEKISRERIGNEIDLMISGNGPVSA 320
Query: 308 MTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQ 367
+T++ L LF +VF LP EP E C +YL+A W L + F+ +QRRL+
Sbjct: 321 VTYLSDLKLFSVVFALPSSAEPSPPENCGSLSQSYLEAMWSLLKTPRPGKFSGEQRRLAL 380
Query: 368 YAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLV 427
YAA+FLPFR T YKD KGK IPVVN+ F+ S+KRK SDAETVMNIH+ E+F SLIPSL
Sbjct: 381 YAAMFLPFRKTVYKDTKGKSIPVVNHIFKFSMKRKTSDAETVMNIHQTTERFRSLIPSLE 440
Query: 428 SAEDVKVNDGQWSKELVD-----------VPDASKLRVLTGFLLREIKKFWRVALLISTL 476
+DV++++ W+ ++++ +P SK+RVLTGFLLR+IK FWRV+LL S L
Sbjct: 441 VKKDVELDELTWAADILEHWKSITLNDPVIPATSKIRVLTGFLLRDIKDFWRVSLLTSLL 500
Query: 477 LYPTHVDHTEDM--LNQ-HFQLDSKRDLFVAAEKAITKLGMVSIF 518
L T VD + D + Q FQL+ R+ ++ E I +LG+ I+
Sbjct: 501 LSAT-VDGSNDHQDIGQLDFQLERMRETYLTVEATIHELGLDKIW 544
>DICTYBASE|DDB_G0293504 [details] [associations]
symbol:DDB_G0293504 "tRNA nucleotidyltransferase"
species:44689 "Dictyostelium discoideum" [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR002646
Pfam:PF01743 dictyBase:DDB_G0293504 GO:GO:0003723 GO:GO:0006396
eggNOG:COG0617 OMA:ISHERIA GO:GO:0016779 EMBL:AAFI02000217
RefSeq:XP_629100.1 ProteinModelPortal:Q54BQ2
EnsemblProtists:DDB0191978 GeneID:8629259 KEGG:ddi:DDB_G0293504
InParanoid:Q54BQ2 ProtClustDB:CLSZ2499618 Uniprot:Q54BQ2
Length = 558
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 165/366 (45%), Positives = 220/366 (60%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I LT+ E ++F L++ +R T LRVAGGWVRDKL G D DIDI LDNMMG FA
Sbjct: 69 IRLTECEIQLFKELMHVIRDSGCGTTLRVAGGWVRDKLRGDDSNDIDITLDNMMGEAFAE 128
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
V ++LS+ GVI SNP+QSKHLETAT+K++D+WIDFVNLR E Y++ SRIP
Sbjct: 129 LVNKHLSSKHHQTHR-IGVIQSNPEQSKHLETATVKVFDMWIDFVNLRSESYTDTSRIPV 187
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
+ GT +DA RRDLTINSLF+NIN + +ED TG+GI DL+ G I TPLP TFLDDPL
Sbjct: 188 ISIGTPLQDALRRDLTINSLFFNINENRIEDFTGQGINDLRDGIIRTPLPSLTTFLDDPL 247
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
RV R+IRF +R +F +DEEL KA + VK A+ +KIS ER+ E D M+S +P ++
Sbjct: 248 RVFRSIRFASRLNFKIDEELFKAGSDPVVKDAIKSKISHERIAKEFDGMLSAEEPYLSIE 307
Query: 310 HICGLTLFWIVFKLPL----QVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRL 365
I LF +F LP + E L+ Y + A D +G D +R
Sbjct: 308 LINKFGLFDCLFSLPTVGLDETYIEQLKNSNKDSEKYCEIA-DSWIGMGKQYEEIDTKRQ 366
Query: 366 SQYAALFLPFRNTTYKD--NKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLI 423
+AL +PF +K+ K K++ +++Y F + +K D + V I E+ + I
Sbjct: 367 LILSALMIPFYGIKFKNANKKNKEMSIIHYMFIEYIKFSNKDYDDVSLILECSEQLMEHI 426
Query: 424 PSLVSA 429
VSA
Sbjct: 427 IKFVSA 432
>CGD|CAL0004347 [details] [associations]
symbol:orf19.4705 species:5476 "Candida albicans" [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004810 "tRNA adenylyltransferase activity"
evidence=IEA] [GO:0001680 "tRNA 3'-terminal CCA addition"
evidence=IEA] InterPro:IPR002646 Pfam:PF01743 CGD:CAL0004347
GO:GO:0003723 GO:GO:0006396 EMBL:AACQ01000005 EMBL:AACQ01000006
eggNOG:COG0617 GO:GO:0016779 RefSeq:XP_722770.1 RefSeq:XP_722917.1
ProteinModelPortal:Q5AME1 STRING:Q5AME1 GeneID:3635490
GeneID:3635681 KEGG:cal:CaO19.12176 KEGG:cal:CaO19.4705
Uniprot:Q5AME1
Length = 547
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 148/418 (35%), Positives = 234/418 (55%)
Query: 68 DKIELTDTETKIFSCLLNTLRHFNLET----VLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
+ I LT TE KI + L+ ++N LR+ GGWVRDKLLG + +DIDIA++++
Sbjct: 23 NSIVLTTTEEKIRNVLVGYCDYYNKTNNDSLELRITGGWVRDKLLGNESHDIDIAVNHLT 82
Query: 124 GSEFATKVAEYLSA-TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYS 182
G EF + +YL E + + I NP++SKHLET T KL+ + IDFVNLR E+Y+
Sbjct: 83 GEEFVNGLHDYLRQHEPELSMNHVHTIKMNPEKSKHLETCTTKLFGVDIDFVNLRSEEYT 142
Query: 183 ENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKA 242
+SR+P++ FGT E+DA RRD T+N+LFYN+N +ED T RG++DL++G + TPL P
Sbjct: 143 HDSRVPSIEFGTPEQDAVRRDATLNALFYNLNQGEIEDYTKRGLSDLQNGILKTPLAPIK 202
Query: 243 TFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN 302
TFLDDPLR++R IRF ++F+F+++ E A + K+AL+ KIS+ER+ E+ +++ N
Sbjct: 203 TFLDDPLRIIRLIRFASKFNFVVESETLNAMKEEHNKSALSTKISKERIEIELRKILTSN 262
Query: 303 QPVKAMTHICGLTLFWIVFKLP---LQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFN 359
P + I + L +F +P + + E LE +++ A + + N
Sbjct: 263 NPGYGLQLINYVDLASSIFYVPELAKEFDNESLEEARSQLACHMEIASLIYPNFKQTINN 322
Query: 360 DDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKF 419
++ +++AAL N YK+ + + YT S K + + +K
Sbjct: 323 STEKFKNEFAALMT---NDDYKNVFWLSVILHPYTNVKSCKPNRDIFNQYLRLGLTSKK- 378
Query: 420 LSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLL 477
S I VSA + +N + S+ P+ K R G LR+ +F + L+++ LL
Sbjct: 379 -SDIAK-VSA--INMNSAELSR-FFSAPELVK-RSDIGLYLRKFPEFASLNLIVNALL 430
>SGD|S000000970 [details] [associations]
symbol:CCA1 "ATP (CTP):tRNA-specific tRNA
nucleotidyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;NAS] [GO:0001680 "tRNA
3'-terminal CCA addition" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA;NAS] [GO:0004810 "tRNA adenylyltransferase activity"
evidence=IDA] [GO:0005759 "mitochondrial matrix" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0052927 "CTP:tRNA
cytidylyltransferase activity" evidence=IEA] [GO:0052928
"CTP:3'-cytidine-tRNA cytidylyltransferase activity" evidence=IEA]
[GO:0052929 "ATP:3'-cytidine-cytidine-tRNA adenylyltransferase
activity" evidence=IEA] InterPro:IPR002646 Pfam:PF01743
SGD:S000000970 GO:GO:0005524 GO:GO:0005634 GO:GO:0005759
GO:GO:0003723 EMBL:BK006939 EMBL:U18922 eggNOG:COG0617
HOGENOM:HOG000168085 KO:K00974 OMA:ISHERIA OrthoDB:EOG4MKRQX
GO:GO:0052929 GO:GO:0052928 GO:GO:0052927 GO:GO:0004810
GO:GO:0001680 EMBL:M59870 PIR:S11180 RefSeq:NP_011095.1
ProteinModelPortal:P21269 DIP:DIP-2841N IntAct:P21269
MINT:MINT-633371 STRING:P21269 PaxDb:P21269 PeptideAtlas:P21269
EnsemblFungi:YER168C GeneID:856915 KEGG:sce:YER168C CYGD:YER168c
GeneTree:ENSGT00390000009678 NextBio:983365 ArrayExpress:P21269
Genevestigator:P21269 GermOnline:YER168C Uniprot:P21269
Length = 546
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 129/265 (48%), Positives = 167/265 (63%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 149 EKYTELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 209 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 268
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 269 LVGPTPLLALQLIQRAHLENVIFFW 293
>POMBASE|SPCC645.10 [details] [associations]
symbol:SPCC645.10 "ATP(CTP) tRNA nucleotidyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0001680
"tRNA 3'-terminal CCA addition" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004810 "tRNA adenylyltransferase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006400 "tRNA modification" evidence=ISO]
[GO:0052927 "CTP:tRNA cytidylyltransferase activity" evidence=IEA]
[GO:0052928 "CTP:3'-cytidine-tRNA cytidylyltransferase activity"
evidence=IEA] [GO:0052929 "ATP:3'-cytidine-cytidine-tRNA
adenylyltransferase activity" evidence=IEA] InterPro:IPR002646
Pfam:PF01743 PomBase:SPCC645.10 GO:GO:0005829 GO:GO:0005739
GO:GO:0005524 EMBL:CU329672 GO:GO:0003723 GO:GO:0006400
eggNOG:COG0617 HOGENOM:HOG000168085 OrthoDB:EOG4MKRQX GO:GO:0052929
GO:GO:0052928 GO:GO:0052927 GO:GO:0004810 GO:GO:0001680 PIR:T41527
RefSeq:NP_588119.1 ProteinModelPortal:Q9Y7U9
EnsemblFungi:SPCC645.10.1 GeneID:2539578 KEGG:spo:SPCC645.10
OMA:KETYTED NextBio:20800736 Uniprot:Q9Y7U9
Length = 484
Score = 558 (201.5 bits), Expect = 5.4e-57, Sum P(2) = 5.4e-57
Identities = 131/347 (37%), Positives = 195/347 (56%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETV------LRVAGGWVRDKLLGKDCYDIDIALDNM 122
+I L D E K+ + L T ++ +R+AGGWVRDKLLG D+D+ L+ +
Sbjct: 4 RIVLNDVEKKVVNLLKKTADFIESKSSSSSSLEVRLAGGWVRDKLLGLSSDDLDVTLNKV 63
Query: 123 MGSEFATKVAEYLSA--TGETAP--SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
G +FA + EY+ + + P G + NPDQSKHLETAT+ L+DL IDFV LR
Sbjct: 64 TGVDFANSIFEYVHSLDSDSVIPYKDALGKLTVNPDQSKHLETATLSLFDLDIDFVGLRA 123
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y + SRIP++ GT E DA RRD T+N+LF+NI T +ED+T RG DL+ +VTP+
Sbjct: 124 ESYDDKSRIPSVTPGTVETDALRRDFTVNTLFFNIRTEKIEDITKRGYKDLQTKVLVTPI 183
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P +FL+DPLR+LR IRF +RF+F +D + A +V A K+S+ERVG EI+ M
Sbjct: 184 SPLQSFLEDPLRILRGIRFASRFEFTIDPSVVSAIQDPKVCKAFEKKVSKERVGEEIEKM 243
Query: 299 VSGNQPVKAMTHICGLTLFWIVFK-LPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSST 357
+ G A+ + + F LP + E ++ + E + + A +L+ S
Sbjct: 244 LKGANAKLALQLLYSTNTYQFTFDTLPAEKEFQIPKALEATESLFQSLALTFPKLMKLS- 302
Query: 358 FNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKAS 404
D++ L Y AL +P+ + T K K+ + +D LK +++
Sbjct: 303 -EDEKIGLWLYVAL-IPWSSQTVMVKK-KQFYIPAIIAKDKLKLRST 346
Score = 46 (21.3 bits), Expect = 5.4e-57, Sum P(2) = 5.4e-57
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 457 GFLLREIKKFWRVALLISTL 476
G L+R++ K W V L S +
Sbjct: 377 GSLIRQLNKSWEVVFLTSVI 396
>ASPGD|ASPL0000066964 [details] [associations]
symbol:AN10924 species:162425 "Emericella nidulans"
[GO:0001680 "tRNA 3'-terminal CCA addition" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0004810 "tRNA
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002646 Pfam:PF01743
GO:GO:0003723 GO:GO:0006396 EMBL:BN001304 HOGENOM:HOG000168085
OMA:KETYTED GO:GO:0016779 ProteinModelPortal:C8VCP2
EnsemblFungi:CADANIAT00000124 Uniprot:C8VCP2
Length = 605
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 160/409 (39%), Positives = 223/409 (54%)
Query: 88 RHFN-LETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT-------G 139
RH + +TVLR GGWVRDKLLG + +DID+A++NM G +F T + EYL G
Sbjct: 123 RHGDGTKTVLRFTGGWVRDKLLGVESHDIDVAINNMTGYQFGTMLKEYLDIPENLDKYKG 182
Query: 140 ETAPSGFGV--IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
+ + I +NP++SKHLET T K++ +D VNLR E Y ENSR P M FGTAEE
Sbjct: 183 QNGEKELSLHKIEANPEKSKHLETVTTKIFGFDVDLVNLRKEAYDENSRTPQMEFGTAEE 242
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRF 257
DA RRD TIN+LFYN+N S VEDLTGRG+ D++ I TP+ P TF DDPLRVLR IRF
Sbjct: 243 DALRRDATINALFYNLNESKVEDLTGRGLDDMRDEIIRTPMEPYQTFKDDPLRVLRLIRF 302
Query: 258 GARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF 317
+R F +D++ + A ++ AAL KISRERVG E+ M+ G P A+ I L L+
Sbjct: 303 ASRLGFRIDKDTENAMQHGDIGAALKLKISRERVGIEVQKMLQGPDPRGALHIIDRLNLY 362
Query: 318 WIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRL------SQYAAL 371
I+F + +V + AY +A L S T + + L + Y+ +
Sbjct: 363 PIIFA---NFQDDVTADYSTWSLAY-EALHRLCSEDDSGTISRVRSLLVRDPLETYYSWV 418
Query: 372 FLPFR--NTTYKDNKGKKI--PVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLV 427
+ F +T +G K+ P + T RDSL+ +D TV + + + ++I
Sbjct: 419 IVAFAPWSTVPTRVQGTKLIPPRMAETARDSLR---ADNRTVNILKQTGTHWRNII---- 471
Query: 428 SAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTL 476
DVK + E A+++R G +R WR +L+S L
Sbjct: 472 ---DVKTALVEGRME----GTAAEVRQQLGLHIRSWSTDWRFCVLLSLL 513
>GENEDB_PFALCIPARUM|PF11_0212 [details] [associations]
symbol:PF11_0212 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR002646 Pfam:PF01743 GO:GO:0003723
GO:GO:0006396 KO:K00974 EMBL:AE014186 GO:GO:0016779 GO:GO:0020011
RefSeq:XP_001347883.1 ProteinModelPortal:Q8IIG2 PRIDE:Q8IIG2
EnsemblProtists:PF11_0212:mRNA GeneID:810759 KEGG:pfa:PF11_0212
EuPathDB:PlasmoDB:PF3D7_1120500 HOGENOM:HOG000282321
ProtClustDB:CLSZ2500893 Uniprot:Q8IIG2
Length = 791
Score = 532 (192.3 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 113/241 (46%), Positives = 147/241 (60%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL 135
E +F L + +NL LRV GGWVRDK L + DIDI +DNM G+EF + EY+
Sbjct: 181 EENLFEFLKSVNERYNLNCTLRVVGGWVRDKFLNINNDDIDITVDNMKGAEFCNYIKEYI 240
Query: 136 SATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
E FG+I N DQSKHLET++ L++ +D VNLR E Y+E SRIP + GT
Sbjct: 241 KEK-ENKNFNFGIIKINSDQSKHLETSSFNLFNFQVDIVNLRNEKYTEESRIPEIVIGTP 299
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
EEDA RRD T+NSLFYN+ VED T +GI LK+ I TPL P ATFLDDPLR++R I
Sbjct: 300 EEDALRRDFTVNSLFYNLKNKKVEDYTEKGIFHLKNHIISTPLEPLATFLDDPLRIVRCI 359
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLT 315
RF F+F L++ + ++++K A KIS+ R+ +EI + S K I LT
Sbjct: 360 RFCGFFNFFLEKSIFNVLKNEDIKKAFTKKISKSRLSSEIVKIFSA----KCKNVILSLT 415
Query: 316 L 316
L
Sbjct: 416 L 416
Score = 55 (24.4 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 18/48 (37%), Positives = 22/48 (45%)
Query: 357 TFND-DQRRLSQYAAL---FLPFRNTTYKDNKGKKIPVVNYTFRDSLK 400
TFN+ D + Y L LP +N GK VV Y R+SLK
Sbjct: 579 TFNNLDYKENMNYIQLCLFLLPLKNHFLYIKNGKTEYVVEYIIRESLK 626
>UNIPROTKB|Q8IIG2 [details] [associations]
symbol:PF11_0212 "tRNA nucleotidyltransferase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR002646 Pfam:PF01743 GO:GO:0003723
GO:GO:0006396 KO:K00974 EMBL:AE014186 GO:GO:0016779 GO:GO:0020011
RefSeq:XP_001347883.1 ProteinModelPortal:Q8IIG2 PRIDE:Q8IIG2
EnsemblProtists:PF11_0212:mRNA GeneID:810759 KEGG:pfa:PF11_0212
EuPathDB:PlasmoDB:PF3D7_1120500 HOGENOM:HOG000282321
ProtClustDB:CLSZ2500893 Uniprot:Q8IIG2
Length = 791
Score = 532 (192.3 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 113/241 (46%), Positives = 147/241 (60%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL 135
E +F L + +NL LRV GGWVRDK L + DIDI +DNM G+EF + EY+
Sbjct: 181 EENLFEFLKSVNERYNLNCTLRVVGGWVRDKFLNINNDDIDITVDNMKGAEFCNYIKEYI 240
Query: 136 SATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
E FG+I N DQSKHLET++ L++ +D VNLR E Y+E SRIP + GT
Sbjct: 241 KEK-ENKNFNFGIIKINSDQSKHLETSSFNLFNFQVDIVNLRNEKYTEESRIPEIVIGTP 299
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
EEDA RRD T+NSLFYN+ VED T +GI LK+ I TPL P ATFLDDPLR++R I
Sbjct: 300 EEDALRRDFTVNSLFYNLKNKKVEDYTEKGIFHLKNHIISTPLEPLATFLDDPLRIVRCI 359
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLT 315
RF F+F L++ + ++++K A KIS+ R+ +EI + S K I LT
Sbjct: 360 RFCGFFNFFLEKSIFNVLKNEDIKKAFTKKISKSRLSSEIVKIFSA----KCKNVILSLT 415
Query: 316 L 316
L
Sbjct: 416 L 416
Score = 55 (24.4 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 18/48 (37%), Positives = 22/48 (45%)
Query: 357 TFND-DQRRLSQYAAL---FLPFRNTTYKDNKGKKIPVVNYTFRDSLK 400
TFN+ D + Y L LP +N GK VV Y R+SLK
Sbjct: 579 TFNNLDYKENMNYIQLCLFLLPLKNHFLYIKNGKTEYVVEYIIRESLK 626
>POMBASE|SPAC1093.04c [details] [associations]
symbol:SPAC1093.04c "tRNA nucleotidyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0001680
"tRNA 3'-terminal CCA addition" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004810 "tRNA adenylyltransferase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006400 "tRNA
modification" evidence=ISO] [GO:0052927 "CTP:tRNA
cytidylyltransferase activity" evidence=IEA] [GO:0052928
"CTP:3'-cytidine-tRNA cytidylyltransferase activity" evidence=IEA]
[GO:0052929 "ATP:3'-cytidine-cytidine-tRNA adenylyltransferase
activity" evidence=IEA] InterPro:IPR002646 Pfam:PF01743
PomBase:SPAC1093.04c GO:GO:0005524 EMBL:CU329670 GO:GO:0003723
GO:GO:0006400 PIR:T50067 RefSeq:NP_594651.2
ProteinModelPortal:Q9UTQ0 EnsemblFungi:SPAC1093.04c.1
GeneID:2542977 KEGG:spo:SPAC1093.04c eggNOG:COG0617
HOGENOM:HOG000168085 KO:K00974 OMA:ISHERIA OrthoDB:EOG4MKRQX
NextBio:20804010 GO:GO:0052929 GO:GO:0052928 GO:GO:0052927
GO:GO:0004810 GO:GO:0001680 Uniprot:Q9UTQ0
Length = 500
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 134/382 (35%), Positives = 207/382 (54%)
Query: 70 IELTDTETKIFSCLLNTLRHFNL----ETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
+EL +TE ++ LN + E +R AGGWVRDKLL + +DID+A+D M G
Sbjct: 8 LELNETEKELSDIFLNVSKKIGQMDRKEPEVRFAGGWVRDKLLRIESHDIDVAIDCMSGF 67
Query: 126 EFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENS 185
EFA + YL+ + I +NP +SKHLETAT ++ + ID VNLR DY+ ++
Sbjct: 68 EFAQHLQSYLAQQHPDWETKVIKIDANPLKSKHLETATARIMGMDIDIVNLRHHDYTNSN 127
Query: 186 RIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFL 245
+ FGT EDA RRD TIN+LFYN+ + +VED TG+G+ DL + I TPL TF
Sbjct: 128 SSNKLVFGTPLEDALRRDATINALFYNLKSKTVEDFTGKGLVDLSNKIIRTPLVADETFG 187
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
DDPLR +R IRF ++DF + EE K + E+ L + ISRER+G E+D M+
Sbjct: 188 DDPLRAVRCIRFATKYDFNIHEETIKGLKNPELHERLRSSISRERIGVEVDKMLKHCNTN 247
Query: 306 KAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDL-----TQLIGSSTFND 360
+A+ I L +F +F PL++ + L+ + + + A DL + + +
Sbjct: 248 RALKIIHSLGMFACIFG-PLEIHTKKLQSKNIESLSLIPYAIDLFGYLQKKDVSIKNLSS 306
Query: 361 DQRRLSQYAALFLPFRN-TTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKF 419
+ + A LP+ N + + +K K +P + RDSLK ++ +M+ +E F
Sbjct: 307 SSKYIFWLAIATLPWYNWSILEKSKIKILPPI--LIRDSLKY----SKPIMS---QVENF 357
Query: 420 LSLIPSLVSAEDVKVNDGQWSK 441
P ++S +V +G+ ++
Sbjct: 358 FVHYPLIMSKINVLEKEGKLTR 379
>DICTYBASE|DDB_G0271378 [details] [associations]
symbol:DDB_G0271378 species:44689 "Dictyostelium
discoideum" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] InterPro:IPR002646 Pfam:PF01743
dictyBase:DDB_G0271378 GO:GO:0003723 EMBL:AAFI02000006
GO:GO:0006396 eggNOG:COG0617 GO:GO:0016779 RefSeq:XP_645671.1
ProteinModelPortal:Q55BE1 EnsemblProtists:DDB0216798 GeneID:8617863
KEGG:ddi:DDB_G0271378 InParanoid:Q55BE1 Uniprot:Q55BE1
Length = 542
Score = 265 (98.3 bits), Expect = 3.3e-33, Sum P(3) = 3.3e-33
Identities = 95/316 (30%), Positives = 152/316 (48%)
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRDLTINSLFYN+NT +ED +G G++DL++ I TPL P T LDDPLR R IRF +R
Sbjct: 170 RRDLTINSLFYNLNTLKIEDHSGYGLSDLENSIIRTPLEPLKTLLDDPLRAFRVIRFASR 229
Query: 261 FD-FILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV-KAMTHICGLTLFW 318
F F ++++L + K ++ K+S+ER+ E LM+S V +++ ++ L
Sbjct: 230 FQGFQIEQQLYNTIKFNLNKQLISNKVSKERIYKEFHLMMSNKSSVIQSIDYLIDTGLIN 289
Query: 319 IVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQR-RLSQY-AALFLPF- 375
+ +++ E+ + + L LI + N+D + Y +FLPF
Sbjct: 290 SIIDFD-----KIINDHEIIKELFKKSLKYLKILINQNNNNNDNLFNIDFYKCCIFLPFF 344
Query: 376 --RNTTYKDNKGKKIP-VVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDV 432
+ +KDN K I ++NY F + S + + ++ FL++ + +
Sbjct: 345 IDAHLGFKDNTSKTIKSLINYQFSTNT---GSTLNISLLFNNLISSFLNINNDTNNNTNN 401
Query: 433 KVNDGQWSKE----LVDVPDASKLRVLTGFLLREIKKF---WRVALLIST--LL--YPTH 481
N+ K+ L ++ D S L + L+ K W L IS LL YP
Sbjct: 402 NTNNINQLKDFKLYLNNLNDKSNLYSIF-HELKNCKAGGLQWNFPLNISIVYLLEKYPDR 460
Query: 482 VDHTEDMLNQHFQLDS 497
+ D+LNQ +L S
Sbjct: 461 ENEILDVLNQLTKLFS 476
Score = 113 (44.8 bits), Expect = 3.3e-33, Sum P(3) = 3.3e-33
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 114 DIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDF 173
DIDIAL N+ G+ F K+ E E+ +I NP++SKHLETA++ ++ IDF
Sbjct: 106 DIDIALSNISGTNFI-KLIEEFKINKESFKKY--LIKRNPEKSKHLETASINIHGFQIDF 162
Query: 174 VNLR-C--EDYSENS 185
+LR C D + NS
Sbjct: 163 NSLRNCLRRDLTINS 177
Score = 92 (37.4 bits), Expect = 3.3e-33, Sum P(3) = 3.3e-33
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETV-LRVAGGWVRDKLL 108
I+++ E K+F L N L N + LRVAGGWVRDKLL
Sbjct: 41 IQISPEENKLFDFLKNILIFNNRNDIELRVAGGWVRDKLL 80
>TIGR_CMR|CHY_1949 [details] [associations]
symbol:CHY_1949 "polyA polymerase family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006396 "RNA processing" evidence=ISS] [GO:0016779
"nucleotidyltransferase activity" evidence=ISS] InterPro:IPR000644
InterPro:IPR001667 InterPro:IPR002646 InterPro:IPR013785
Pfam:PF00571 Pfam:PF01368 Pfam:PF01743 PROSITE:PS51371
SMART:SM00116 GO:GO:0005524 Gene3D:3.20.20.70 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0006396 GO:GO:0016787
GO:GO:0030145 eggNOG:COG0617 KO:K00974 GO:GO:0016779
RefSeq:YP_360768.1 ProteinModelPortal:Q3AAR6 STRING:Q3AAR6
GeneID:3728062 KEGG:chy:CHY_1949 PATRIC:21276985
HOGENOM:HOG000011569 OMA:FRAIRFE
BioCyc:CHYD246194:GJCN-1948-MONOMER Uniprot:Q3AAR6
Length = 864
Score = 214 (80.4 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 76/244 (31%), Positives = 120/244 (49%)
Query: 83 LLNTLRHFNLETVLRV--AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGE 140
L+N + + + +RV GG VRD LLG D+DI ++ G A +A+ + G+
Sbjct: 461 LINVVGKWASQLGMRVFLVGGIVRDLLLGHKQKDLDIVVE---GD--ALVLAQEV---GK 512
Query: 141 TAPSGFGVIPSNPDQSKHLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAEEDA 199
T S IP + +TA++ L + IDF R E Y + +P + T ED
Sbjct: 513 TL-SAIKFIPH-----ERFKTASIILKNGQKIDFSTSRVEFYQHPAALPEVEVSTIREDL 566
Query: 200 YRRDLTINSLFYNINTSSVEDLTGR--GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRF 257
YRRD TINS+ I + +L G+ DL+ G I+ L +F++DP R+LRA+RF
Sbjct: 567 YRRDFTINSMAIEITYGHIGELFDPFGGLLDLREG-IIRVLH-NLSFVEDPTRILRALRF 624
Query: 258 GARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF 317
RF+F L+E +K D + +S R+ E+ L+ + +K + + +F
Sbjct: 625 LGRFNFKLEENTEKLLV-DAIAGGFLNLVSSARILYELKLIFAEKDILKILKFLKHYGVF 683
Query: 318 WIVF 321
VF
Sbjct: 684 QEVF 687
>UNIPROTKB|Q7D4M2 [details] [associations]
symbol:pcnB "PolyA polymerase" species:1773 "Mycobacterium
tuberculosis" [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
InterPro:IPR002646 InterPro:IPR003607 InterPro:IPR006674
Pfam:PF01743 Pfam:PF01966 SMART:SM00471 GO:GO:0005886 GO:GO:0005524
GO:GO:0040007 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0003723 GO:GO:0006396
GO:GO:0008081 GO:GO:0004652 InterPro:IPR006675 TIGRFAMs:TIGR00277
KO:K00970 EMBL:AL123456 OMA:GWTFHGH PIR:D70600 RefSeq:NP_338576.1
RefSeq:YP_006517408.1 RefSeq:YP_178026.1 DNASU:886240
EnsemblBacteria:EBMYCT00000000052 EnsemblBacteria:EBMYCT00000068971
GeneID:13317535 GeneID:886240 GeneID:922517 KEGG:mtc:MT4026
KEGG:mtu:Rv3907c KEGG:mtv:RVBD_3907c PATRIC:18130609
TubercuList:Rv3907c HOGENOM:HOG000253344 ProtClustDB:CLSK881177
InterPro:IPR014065 PANTHER:PTHR13734:SF25 TIGRFAMs:TIGR02692
Uniprot:Q7D4M2
Length = 480
Score = 203 (76.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 70/213 (32%), Positives = 100/213 (46%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D V + A +T FG + +
Sbjct: 39 LYLVGGSVRDALLGRLSPDLDFTTD-ARPERVQEIVRPWADAVWDTGIE-FGTV--GVGK 94
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
S H ++ R + Y SR P +RFG E D RRD T N++ +
Sbjct: 95 SDHR-----------MEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVT 143
Query: 215 -TSSVE--DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
T E D G G+A L+ + TP P +F DDPLR+LRA RF ++ F + ++
Sbjct: 144 ATGPGEFLDPLG-GLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVR- 201
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
AA +E+ LA +IS ERV E+D ++ G P
Sbjct: 202 -AAIEEMAPQLA-RISAERVAAELDKLLVGEDP 232
>TIGR_CMR|GSU_1581 [details] [associations]
symbol:GSU_1581 "polyA polymerase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] InterPro:IPR000644 InterPro:IPR001667
InterPro:IPR002646 InterPro:IPR003156 InterPro:IPR013785
Pfam:PF00571 Pfam:PF01368 Pfam:PF01743 Pfam:PF02272 PROSITE:PS51371
SMART:SM00116 GO:GO:0005524 Gene3D:3.20.20.70 GO:GO:0003723
GO:GO:0006396 GO:GO:0016787 GO:GO:0030145 EMBL:AE017180
GenomeReviews:AE017180_GR KO:K00974 GO:GO:0016779
HOGENOM:HOG000011569 OMA:FRAIRFE RefSeq:NP_952632.1
ProteinModelPortal:Q74CU0 GeneID:2685520 KEGG:gsu:GSU1581
PATRIC:22026007 ProtClustDB:CLSK924522
BioCyc:GSUL243231:GH27-1608-MONOMER Uniprot:Q74CU0
Length = 880
Score = 206 (77.6 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 75/246 (30%), Positives = 114/246 (46%)
Query: 92 LETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET-APSGFGVIP 150
LE + GG+VRD LLG + DID++++ G FA VA + ++ A G VI
Sbjct: 478 LELPVYAVGGFVRDLLLGAENDDIDVSVEGD-GILFAETVANRVGCRVKSHAKFGTAVIV 536
Query: 151 SNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLF 210
PD K +D + R E Y +PT+ + + D YRRD TIN+L
Sbjct: 537 F-PDGLK-------------VDVASTRLEYYETPGALPTVERSSLKMDLYRRDFTINTLA 582
Query: 211 YNINTS---SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDE 267
+N ++ D G DL+ K + L +F++DP RV RAIRF R F +
Sbjct: 583 VKLNAEGFGTLIDYFG-AYRDLQE-KTIRVLH-NLSFVEDPTRVFRAIRFEQRLGFPISR 639
Query: 268 ELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQV 327
+ + VK K+ R+ E+ L++ +PVKA+ + GL L + L +
Sbjct: 640 HTENLI-KNAVKMGFLDKLGGRRLLNELVLILREREPVKAILRMSGLGLLRFIHP-DLVL 697
Query: 328 EPEVLE 333
P L+
Sbjct: 698 APNTLQ 703
>TIGR_CMR|CBU_0286 [details] [associations]
symbol:CBU_0286 "polyA polymerase" species:227377
"Coxiella burnetii RSA 493" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] InterPro:IPR002646 InterPro:IPR010206
Pfam:PF01743 GO:GO:0005524 GO:GO:0006378 GO:GO:0003723
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004810
InterPro:IPR026007 PANTHER:PTHR13734:SF5 GO:GO:0004652
HOGENOM:HOG000256527 KO:K00970 OMA:RFMAKLD InterPro:IPR025866
Pfam:PF12626 TIGRFAMs:TIGR01942 RefSeq:NP_819330.1
ProteinModelPortal:Q83EM9 PRIDE:Q83EM9 GeneID:1208168
KEGG:cbu:CBU_0286 PATRIC:17929263 ProtClustDB:CLSK913956
BioCyc:CBUR227377:GJ7S-292-MONOMER Uniprot:Q83EM9
Length = 439
Score = 179 (68.1 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 40/85 (47%), Positives = 57/85 (67%)
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL-PPKATFLDDPLR 250
+GT EEDA+RRD T+N+L+YNI SV D TG G+ DL H +++ + P + +DP+R
Sbjct: 147 YGTIEEDAWRRDFTVNALYYNITDFSVIDFTG-GMRDL-HQRLIRMIGDPTQRYHEDPVR 204
Query: 251 VLRAIRFGARFDFIL----DEELKK 271
+LRAIR A+ DF + +E LKK
Sbjct: 205 LLRAIRLAAKLDFKIHPDTEEPLKK 229
Score = 45 (20.9 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 98 VAGGWVRDKLLGKDCYDIDIA 118
+ GG VRD LL D DIA
Sbjct: 58 LVGGGVRDMLLSYHPKDFDIA 78
>UNIPROTKB|Q9KUC8 [details] [associations]
symbol:VC_0594 "PolyA polymerase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] InterPro:IPR002646 InterPro:IPR010206
Pfam:PF01743 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006378 GO:GO:0003723 GO:GO:0006396 InterPro:IPR026007
PANTHER:PTHR13734:SF5 GO:GO:0004652 KO:K00970 OMA:RFMAKLD
InterPro:IPR025866 Pfam:PF12626 TIGRFAMs:TIGR01942 PIR:C82304
RefSeq:NP_230244.1 ProteinModelPortal:Q9KUC8 GeneID:2615382
KEGG:vch:VC0594 PATRIC:20080300 ProtClustDB:CLSK874026
Uniprot:Q9KUC8
Length = 457
Score = 174 (66.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 41/112 (36%), Positives = 66/112 (58%)
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
+GT +EDA RRD TIN+++YNI S+ D G G+ DL+ + P+ + +DP+R+
Sbjct: 141 YGTIDEDAERRDFTINAMYYNIADYSIHDYAG-GMEDLEDRLVRLIGDPETRYREDPVRM 199
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTE-IDLMVSGN 302
LRA+RF + DF ++E+ AA E A L I R+ E + ++ +G+
Sbjct: 200 LRAVRFAVKLDFDIEED---TAAPIEQLAPLLRDIPAARLYEESLKMLQAGH 248
Score = 49 (22.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 98 VAGGWVRDKLLGKDCYDIDIA 118
+ GG VRD LLG D D+A
Sbjct: 54 LVGGGVRDLLLGGKPKDFDVA 74
>TIGR_CMR|VC_0594 [details] [associations]
symbol:VC_0594 "polyA polymerase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] InterPro:IPR002646 InterPro:IPR010206
Pfam:PF01743 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006378 GO:GO:0003723 GO:GO:0006396 InterPro:IPR026007
PANTHER:PTHR13734:SF5 GO:GO:0004652 KO:K00970 OMA:RFMAKLD
InterPro:IPR025866 Pfam:PF12626 TIGRFAMs:TIGR01942 PIR:C82304
RefSeq:NP_230244.1 ProteinModelPortal:Q9KUC8 GeneID:2615382
KEGG:vch:VC0594 PATRIC:20080300 ProtClustDB:CLSK874026
Uniprot:Q9KUC8
Length = 457
Score = 174 (66.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 41/112 (36%), Positives = 66/112 (58%)
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
+GT +EDA RRD TIN+++YNI S+ D G G+ DL+ + P+ + +DP+R+
Sbjct: 141 YGTIDEDAERRDFTINAMYYNIADYSIHDYAG-GMEDLEDRLVRLIGDPETRYREDPVRM 199
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTE-IDLMVSGN 302
LRA+RF + DF ++E+ AA E A L I R+ E + ++ +G+
Sbjct: 200 LRAVRFAVKLDFDIEED---TAAPIEQLAPLLRDIPAARLYEESLKMLQAGH 248
Score = 49 (22.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 98 VAGGWVRDKLLGKDCYDIDIA 118
+ GG VRD LLG D D+A
Sbjct: 54 LVGGGVRDLLLGGKPKDFDVA 74
>TIGR_CMR|GSU_3250 [details] [associations]
symbol:GSU_3250 "polyA polymerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] InterPro:IPR002646 InterPro:IPR010206
Pfam:PF01743 GO:GO:0005524 GO:GO:0006378 GO:GO:0003723
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR026007
PANTHER:PTHR13734:SF5 GO:GO:0004652 HOGENOM:HOG000256527 KO:K00970
InterPro:IPR025866 Pfam:PF12626 TIGRFAMs:TIGR01942
RefSeq:NP_954291.2 ProteinModelPortal:Q747L5 GeneID:2686371
KEGG:gsu:GSU3250 PATRIC:22029341 ProtClustDB:CLSK829184
BioCyc:GSUL243231:GH27-3226-MONOMER Uniprot:Q747L5
Length = 459
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 62/191 (32%), Positives = 89/191 (46%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALD-------------NMMGSEFATKVAEYLSATGETAPS 144
+ GG VRD LLG++ D D+A D ++G F + E A
Sbjct: 44 LVGGCVRDLLLGREPKDFDVATDATPNQIKRIFRNCRLVGRRFRLAHIHFTDEIIEVAT- 102
Query: 145 GFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR---FGTAEEDAYR 201
F + S P+Q + A + LR + + +R FGT EDA R
Sbjct: 103 -FRAL-SPPEQGEGEPVADETGQRGGDEAERLRPPRHLVSDEGMVLRDNVFGTPGEDALR 160
Query: 202 RDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF 261
RD T+N+L Y I S+ D G G+ DL+ G I T P+ F +DP+R+LRA+RF A
Sbjct: 161 RDFTVNALAYCIADFSIIDYAG-GMEDLQRGMIRTIGDPRVRFTEDPVRMLRAVRFAAVL 219
Query: 262 DFILDEELKKA 272
F ++EE +A
Sbjct: 220 GFAVEEETWQA 230
>RGD|1308857 [details] [associations]
symbol:Trnt1 "tRNA nucleotidyl transferase, CCA-adding, 1"
species:10116 "Rattus norvegicus" [GO:0000049 "tRNA binding"
evidence=IEA;ISO] [GO:0004810 "tRNA adenylyltransferase activity"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005813
"centrosome" evidence=IEA;ISO] [GO:0009022 "tRNA
nucleotidyltransferase activity" evidence=IEA] [GO:0042780 "tRNA
3'-end processing" evidence=IEA;ISO] InterPro:IPR002646
InterPro:IPR026973 Pfam:PF01743 RGD:1308857 GO:GO:0005739
GO:GO:0005813 GO:GO:0000049 eggNOG:COG0617 KO:K00974 GO:GO:0004810
GeneTree:ENSGT00390000009678 GO:GO:0042780 GO:GO:0009022 CTD:51095
HOGENOM:HOG000253345 HOVERGEN:HBG061403 OMA:CELLKYQ
OrthoDB:EOG4PK27R PANTHER:PTHR13734:SF11 EMBL:BC095841
EMBL:BC105612 IPI:IPI00188677 RefSeq:NP_001019432.1
UniGene:Rn.159746 SMR:Q4VBH2 STRING:Q4VBH2
Ensembl:ENSRNOT00000008526 GeneID:312616 KEGG:rno:312616
UCSC:RGD:1308857 InParanoid:Q4VBH2 NextBio:665037
Genevestigator:Q4VBH2 Uniprot:Q4VBH2
Length = 434
Score = 174 (66.3 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 71/218 (32%), Positives = 104/218 (47%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
LR+AGG VRD L G D+D A + T++ E A +G +I N
Sbjct: 59 LRIAGGAVRDLLNGVKPQDVDFAT-----TATPTEMKEMFQA------AGIRMI--NNKG 105
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
KH T T +L++ + LR D S + R + F T ++DA RRDLTINS+F +
Sbjct: 106 EKH-GTITARLHEENFEVTTLRI-DVSTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFD 163
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF-DFILDEELKKAA 273
+ + G ADLK+ K+ K +D LR+LR RF R D D + +
Sbjct: 164 GTLFDYFNG--YADLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIVDKPGDHDRETLE 221
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
A E LA IS ER+ E+ +++G+ V + H+
Sbjct: 222 AIAENAKGLAG-ISGERIWVELKKILTGDH-VNHLIHL 257
>WB|WBGene00010089 [details] [associations]
symbol:hpo-31 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0009022 "tRNA nucleotidyltransferase activity" evidence=IEA]
[GO:0042780 "tRNA 3'-end processing" evidence=IEA] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743
GO:GO:0005739 GO:GO:0008340 GO:GO:0006898 GO:GO:0040007
GO:GO:0002119 GO:GO:0003723 eggNOG:COG0617 KO:K00974
GeneTree:ENSGT00390000009678 EMBL:Z79757 GO:GO:0042780
GO:GO:0009022 HOGENOM:HOG000253345 PANTHER:PTHR13734:SF11
HSSP:Q96Q11 PIR:T22699 RefSeq:NP_001023976.1
ProteinModelPortal:Q93795 SMR:Q93795 STRING:Q93795 PaxDb:Q93795
EnsemblMetazoa:F55B12.4.1 EnsemblMetazoa:F55B12.4.2
EnsemblMetazoa:F55B12.4.3 EnsemblMetazoa:F55B12.4.4 GeneID:3565786
KEGG:cel:CELE_F55B12.4 UCSC:F55B12.4.1 CTD:3565786
WormBase:F55B12.4 InParanoid:Q93795 OMA:DIDIATP NextBio:957853
Uniprot:Q93795
Length = 436
Score = 174 (66.3 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 81/256 (31%), Positives = 116/256 (45%)
Query: 69 KIELTDTETKIFSCLLNTLRHF----NLETVLRVAGGWVRDKLLGKDCYDIDIA---LDN 121
KI+ D T +F+ L LR N E LR+AGG VRD L+ D+D A
Sbjct: 10 KIDNEDFRT-LFTPQLLKLRDLFAKRNYE--LRIAGGAVRDLLMNIRPADVDFASTATPT 66
Query: 122 MMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDY 181
M F L GE G I D ++ E T+++ D+ D + E Y
Sbjct: 67 QMKEMFEEDKIRMLHKRGEE----HGTITCRIDDCENFEITTLRV-DIVCDGRRAQVE-Y 120
Query: 182 SENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPK 241
+ + ++ DA RRDLTINSLF +++ +V D G GI D++ +I +
Sbjct: 121 TTDWQL----------DANRRDLTINSLFLDLH-GNVVDYFG-GIRDIETRRIAFVGDAR 168
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
+D LR+LR RF R + E A E K +A IS ER+ TE+ +V G
Sbjct: 169 QRIQEDYLRILRYFRFFGRISDCTEHEHDTIQAIVENKDGMAG-ISAERIWTELKKIVVG 227
Query: 302 ---NQPVKAMTHICGL 314
++ +KAM C L
Sbjct: 228 RMADEVLKAMIEQCEL 243
>UNIPROTKB|P0ABF1 [details] [associations]
symbol:pcnB species:83333 "Escherichia coli K-12"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;IDA] [GO:0009451 "RNA modification"
evidence=IGI;IMP;IDA] [GO:0006397 "mRNA processing" evidence=IDA]
[GO:0006276 "plasmid maintenance" evidence=IEA;IMP] [GO:0006378
"mRNA polyadenylation" evidence=IEA;IMP] [GO:0003723 "RNA binding"
evidence=IEA;IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR002646 InterPro:IPR010206 Pfam:PF01743
GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0006276 eggNOG:COG0617
InterPro:IPR026007 PANTHER:PTHR13734:SF5 GO:GO:0009451
GO:GO:0004652 EMBL:M20574 EMBL:S48039 PIR:G64737 RefSeq:NP_414685.4
RefSeq:YP_488446.1 ProteinModelPortal:P0ABF1 SMR:P0ABF1
DIP:DIP-47859N EnsemblBacteria:EBESCT00000000999
EnsemblBacteria:EBESCT00000001000 EnsemblBacteria:EBESCT00000001001
EnsemblBacteria:EBESCT00000017202 GeneID:12934035 GeneID:947318
KEGG:ecj:Y75_p0140 KEGG:eco:b0143 PATRIC:32115393 EchoBASE:EB0684
EcoGene:EG10690 HOGENOM:HOG000256527 KO:K00970 OMA:RFMAKLD
ProtClustDB:PRK11623 BioCyc:EcoCyc:EG10690-MONOMER
BioCyc:ECOL316407:JW5808-MONOMER BioCyc:MetaCyc:EG10690-MONOMER
Genevestigator:P0ABF1 InterPro:IPR025866 Pfam:PF12626
TIGRFAMs:TIGR01942 Uniprot:P0ABF1
Length = 465
Score = 166 (63.5 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 35/77 (45%), Positives = 49/77 (63%)
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
FG+ EEDA RRD TINSL+Y++ +V D G G+ DLK G I P+ + +DP+R+
Sbjct: 151 FGSIEEDAQRRDFTINSLYYSVADFTVRDYVG-GMKDLKDGVIRLIGNPETRYREDPVRM 209
Query: 252 LRAIRFGARFDFILDEE 268
LRA+RF A+ + E
Sbjct: 210 LRAVRFAAKLGMRISPE 226
Score = 52 (23.4 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 98 VAGGWVRDKLLGKDCYDIDI 117
+ GG VRD LLGK D D+
Sbjct: 64 LVGGGVRDLLLGKKPKDFDV 83
>ZFIN|ZDB-GENE-040625-176 [details] [associations]
symbol:trnt1 "tRNA nucleotidyl transferase,
CCA-adding, 1" species:7955 "Danio rerio" [GO:0042780 "tRNA 3'-end
processing" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009022
"tRNA nucleotidyltransferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743
ZFIN:ZDB-GENE-040625-176 GO:GO:0005739 GO:GO:0003723 KO:K00974
GO:GO:0042780 GO:GO:0009022 CTD:51095 HOVERGEN:HBG061403
PANTHER:PTHR13734:SF11 EMBL:BC071337 IPI:IPI00771442
RefSeq:NP_001002159.1 UniGene:Dr.84190 ProteinModelPortal:Q6IQR7
SMR:Q6IQR7 GeneID:415249 KEGG:dre:415249 InParanoid:Q6IQR7
NextBio:20818912 Uniprot:Q6IQR7
Length = 405
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 67/208 (32%), Positives = 95/208 (45%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
LR+AGG VRD L GK D+D A T E + +TA GV N
Sbjct: 30 LRIAGGAVRDLLSGKRPEDVDFA---------TTATPEEMKTMFQTA----GVRMINNKG 76
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
KH T T +L++ + LR D + R + F T ++DA RRDLTINS+F ++
Sbjct: 77 EKH-GTITARLHEENFEVTTLRV-DVQTDGRHAEVEFTTDWQKDAERRDLTINSMFLGLD 134
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
++ D +G DLK+ K+ +D LR+LR RF R + +
Sbjct: 135 -GTLYDYF-QGYEDLKNRKVRFVGSASLRIQEDYLRILRYFRFYGRVAAEPGQHEPETLE 192
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGN 302
+ A A IS ER+ E+ M+ GN
Sbjct: 193 AIRENARGLAGISGERIWVELKKMLVGN 220
>MGI|MGI:1917297 [details] [associations]
symbol:Trnt1 "tRNA nucleotidyl transferase, CCA-adding, 1"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001680 "tRNA 3'-terminal CCA addition" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004810 "tRNA
adenylyltransferase activity" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;ISA;IDA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0009022 "tRNA
nucleotidyltransferase activity" evidence=ISO] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0042780 "tRNA
3'-end processing" evidence=ISO] [GO:0052927 "CTP:tRNA
cytidylyltransferase activity" evidence=IEA] [GO:0052928
"CTP:3'-cytidine-tRNA cytidylyltransferase activity" evidence=IEA]
[GO:0052929 "ATP:3'-cytidine-cytidine-tRNA adenylyltransferase
activity" evidence=IEA] InterPro:IPR002646 InterPro:IPR026973
Pfam:PF01743 MGI:MGI:1917297 GO:GO:0005739 GO:GO:0005524
GO:GO:0005813 GO:GO:0000049 eggNOG:COG0617 KO:K00974 GO:GO:0052929
GO:GO:0052928 GO:GO:0052927 GO:GO:0004810 GO:GO:0001680
GeneTree:ENSGT00390000009678 GO:GO:0042780 GO:GO:0009022 CTD:51095
HOGENOM:HOG000253345 HOVERGEN:HBG061403 OMA:CELLKYQ
OrthoDB:EOG4PK27R PANTHER:PTHR13734:SF11 EMBL:AB063106
EMBL:AK011764 EMBL:AK135791 EMBL:AK152739 EMBL:AK166804
EMBL:BC031764 IPI:IPI00187402 IPI:IPI00651932 RefSeq:NP_001229287.1
RefSeq:NP_001229289.1 RefSeq:NP_081572.1 UniGene:Mm.196332
ProteinModelPortal:Q8K1J6 SMR:Q8K1J6 STRING:Q8K1J6
PhosphoSite:Q8K1J6 PaxDb:Q8K1J6 PRIDE:Q8K1J6
Ensembl:ENSMUST00000057578 Ensembl:ENSMUST00000113247
Ensembl:ENSMUST00000113248 Ensembl:ENSMUST00000113249 GeneID:70047
KEGG:mmu:70047 UCSC:uc009dcy.1 InParanoid:Q8K1J6 NextBio:330891
Bgee:Q8K1J6 CleanEx:MM_TRNT1 Genevestigator:Q8K1J6
GermOnline:ENSMUSG00000013736 Uniprot:Q8K1J6
Length = 434
Score = 167 (63.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 69/218 (31%), Positives = 104/218 (47%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
LR+AGG VRD L G D+D A + T++ E + +G +I N
Sbjct: 59 LRIAGGAVRDLLNGVKPQDVDFAT-----TATPTQMKEMFQS------AGIRMI--NNKG 105
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
KH T T +L++ + LR D + + R + F T ++DA RRDLTINS+F +
Sbjct: 106 EKH-GTITARLHEENFEVTTLRI-DVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFD 163
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF-DFILDEELKKAA 273
+ + G ADLK+ K+ K +D LR+LR RF R D D + +
Sbjct: 164 GTLFDYFNG--YADLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIVDRPGDHDHETLE 221
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
A E LA IS ER+ E+ +++G+ V + H+
Sbjct: 222 AIAENAKGLAG-ISGERIWVELKKILTGDH-VNHLIHL 257
>UNIPROTKB|Q96Q11 [details] [associations]
symbol:TRNT1 "CCA tRNA nucleotidyltransferase 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0009022 "tRNA
nucleotidyltransferase activity" evidence=IEA] [GO:0001680 "tRNA
3'-terminal CCA addition" evidence=IEA] [GO:0052927 "CTP:tRNA
cytidylyltransferase activity" evidence=IEA] [GO:0052928
"CTP:3'-cytidine-tRNA cytidylyltransferase activity" evidence=IEA]
[GO:0052929 "ATP:3'-cytidine-cytidine-tRNA adenylyltransferase
activity" evidence=IEA] [GO:0004810 "tRNA adenylyltransferase
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=TAS]
[GO:0000049 "tRNA binding" evidence=IDA] [GO:0042780 "tRNA 3'-end
processing" evidence=IDA] [GO:0006626 "protein targeting to
mitochondrion" evidence=TAS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] InterPro:IPR002646 InterPro:IPR026973
Pfam:PF01743 EMBL:AB063105 GO:GO:0005739 GO:GO:0005524
GO:GO:0005813 GO:GO:0006626 EMBL:CH471055 GO:GO:0000049
eggNOG:COG0617 KO:K00974 GO:GO:0052929 GO:GO:0052928 GO:GO:0052927
GO:GO:0004810 GO:GO:0001680 EMBL:AC024060 GO:GO:0042780
GO:GO:0009022 EMBL:AF151805 EMBL:AK290411 EMBL:AL834397
EMBL:BC005184 EMBL:BC012537 IPI:IPI00289807 IPI:IPI00301719
IPI:IPI00305221 RefSeq:NP_886552.2 UniGene:Hs.732725 PDB:1OU5
PDBsum:1OU5 ProteinModelPortal:Q96Q11 SMR:Q96Q11 IntAct:Q96Q11
STRING:Q96Q11 PhosphoSite:Q96Q11 DMDM:296452848 PaxDb:Q96Q11
PRIDE:Q96Q11 DNASU:51095 Ensembl:ENST00000251607
Ensembl:ENST00000280591 Ensembl:ENST00000339437
Ensembl:ENST00000402675 Ensembl:ENST00000420393
Ensembl:ENST00000434583 GeneID:51095 KEGG:hsa:51095 UCSC:uc003bpp.4
UCSC:uc010hbv.3 CTD:51095 GeneCards:GC03P003168 HGNC:HGNC:17341
HPA:HPA036938 MIM:612907 neXtProt:NX_Q96Q11 PharmGKB:PA38446
HOGENOM:HOG000253345 HOVERGEN:HBG061403 InParanoid:Q96Q11
OMA:CELLKYQ OrthoDB:EOG4PK27R PhylomeDB:Q96Q11 BRENDA:2.7.7.21
EvolutionaryTrace:Q96Q11 GenomeRNAi:51095 NextBio:53789
ArrayExpress:Q96Q11 Bgee:Q96Q11 CleanEx:HS_TRNT1
Genevestigator:Q96Q11 GermOnline:ENSG00000072756
PANTHER:PTHR13734:SF11 Uniprot:Q96Q11
Length = 434
Score = 165 (63.1 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 70/218 (32%), Positives = 102/218 (46%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
LR+AGG VRD L G DID A + T++ E + +G +I N
Sbjct: 59 LRIAGGAVRDLLNGVKPQDIDFAT-----TATPTQMKEMFQS------AGIRMI--NNRG 105
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
KH T T +L++ + LR D + + R + F T ++DA RRDLTINS+F +
Sbjct: 106 EKH-GTITARLHEENFEITTLRI-DVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFD 163
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF-DFILDEELKKAA 273
+ + G DLK+ K+ K +D LR+LR RF R D D + +
Sbjct: 164 GTLFDYFNG--YEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIVDKPGDHDPETLE 221
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
A E LA IS ER+ E+ ++ GN V + H+
Sbjct: 222 AIAENAKGLAG-ISGERIWVELKKILVGNH-VNHLIHL 257
>UNIPROTKB|F1SFL7 [details] [associations]
symbol:TRNT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042780 "tRNA 3'-end processing" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004810 "tRNA adenylyltransferase activity"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA] [GO:0009022
"tRNA nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743 GO:GO:0005739
GO:GO:0005813 GO:GO:0000049 GO:GO:0004810
GeneTree:ENSGT00390000009678 GO:GO:0042780 GO:GO:0009022
OMA:CELLKYQ PANTHER:PTHR13734:SF11 EMBL:CU914461 EMBL:CU468616
Ensembl:ENSSSCT00000012619 Uniprot:F1SFL7
Length = 434
Score = 164 (62.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 71/218 (32%), Positives = 100/218 (45%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
LR+AGG VRD L G D+D A AT V E S G+ N
Sbjct: 59 LRIAGGAVRDLLSGVKPQDVDFATT-------ATPVQ-----MKELFQS-VGIRMINNKG 105
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
KH T T +L++ + LR D + + R + F T ++DA RRDLTINS+F +
Sbjct: 106 EKH-GTITARLHEENFEITTLRV-DVATDGRHAEVEFTTDWQKDAERRDLTINSMFLGFD 163
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRF-GARFDFILDEELKKAA 273
+ + G DLK+ K+ K +D LR+LR RF G D D + +
Sbjct: 164 GTLFDYFNG--YEDLKNKKVRFVGQAKQRIQEDYLRILRYFRFYGKIVDKPGDHDPETLE 221
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
A E LA IS ER+ E+ +++GN V + H+
Sbjct: 222 AIAENAKGLAG-ISGERIWVELKKILTGNH-VNHLIHL 257
>UNIPROTKB|Q4K5Y6 [details] [associations]
symbol:pcnB "Poly(A) polymerase" species:220664
"Pseudomonas protegens Pf-5" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006276 "plasmid
maintenance" evidence=ISS] [GO:0006378 "mRNA polyadenylation"
evidence=ISS] InterPro:IPR002646 InterPro:IPR010206 Pfam:PF01743
GO:GO:0005524 GO:GO:0006378 GO:GO:0003723 EMBL:CP000076
GO:GO:0006276 eggNOG:COG0617 InterPro:IPR026007
PANTHER:PTHR13734:SF5 GO:GO:0004652 KO:K00970 InterPro:IPR025866
Pfam:PF12626 TIGRFAMs:TIGR01942 RefSeq:YP_262347.2 GeneID:3479671
KEGG:pfl:PFL_5275 PATRIC:19880025 HOGENOM:HOG000256526
ProtClustDB:CLSK868862 BioCyc:PFLU220664:GIX8-5316-MONOMER
Uniprot:Q4K5Y6
Length = 463
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 61/207 (29%), Positives = 102/207 (49%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LL D D+A + K AE+ +A F ++ + + +
Sbjct: 58 LVGGCVRDMLLNITPKDFDVATS---ATPEQVK-AEFRNA--RIIGRRFKLVHIHFGR-E 110
Query: 158 HLETATMKL-YDLWIDFVNLRCEDYSENSRIPTMR-FGTAEEDAYRRDLTINSLFYNINT 215
+E AT + + D + +E+ RI +GT EEDA RRD TIN+L+Y+ +
Sbjct: 111 IIEVATFRANHPQNEDDEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVS 170
Query: 216 SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+ D G+ D+++ I P+ + +DP+R+LRA+RF A+ +F ++ K AA
Sbjct: 171 ERILDYAN-GVHDIRNNLIRLIGDPRQRYQEDPVRMLRAVRFAAKLNFGIE---KHTAAP 226
Query: 276 DEVKAALAAKISRERVGTEI-DLMVSG 301
A + +I R+ E+ L +SG
Sbjct: 227 IRELAPMLREIPSARLFEEVLKLFLSG 253
>UNIPROTKB|Q1RML6 [details] [associations]
symbol:TRNT1 "tRNA nucleotidyl transferase, CCA-adding, 1"
species:9913 "Bos taurus" [GO:0042780 "tRNA 3'-end processing"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004810 "tRNA adenylyltransferase
activity" evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
[GO:0009022 "tRNA nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743 GO:GO:0005739
GO:GO:0005813 GO:GO:0000049 eggNOG:COG0617 KO:K00974 GO:GO:0004810
GeneTree:ENSGT00390000009678 GO:GO:0042780 GO:GO:0009022 CTD:51095
HOGENOM:HOG000253345 HOVERGEN:HBG061403 OMA:CELLKYQ
OrthoDB:EOG4PK27R PANTHER:PTHR13734:SF11 EMBL:DAAA02053908
EMBL:BC114831 IPI:IPI00696752 RefSeq:NP_001039341.1
UniGene:Bt.102078 SMR:Q1RML6 STRING:Q1RML6
Ensembl:ENSBTAT00000026029 GeneID:407144 KEGG:bta:407144
InParanoid:Q1RML6 NextBio:20818408 Uniprot:Q1RML6
Length = 434
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 67/218 (30%), Positives = 99/218 (45%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
LR+AGG VRD L G D+D FAT A + G+ N
Sbjct: 59 LRIAGGAVRDLLSGVKPQDVD----------FATTATP---AQMKELFQSVGIRMINNKG 105
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
KH T T +L++ + LR D + + R + F T ++DA RRDLTINS+F +
Sbjct: 106 EKH-GTITARLHEENFEITTLRI-DVATDGRHAEVEFTTDWQKDAERRDLTINSMFLGFD 163
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRF-GARFDFILDEELKKAA 273
+ + G DLK+ K+ K +D LR+LR RF G D D + +
Sbjct: 164 GTLFDYFNG--YEDLKNKKVRFVGQAKQRIQEDYLRILRYFRFYGKIVDTPGDHDPETLE 221
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
A E LA +S ER+ E+ +++G+ V + H+
Sbjct: 222 AIAENAKGLAG-VSGERIWVELKKILTGDH-VNHLIHL 257
>UNIPROTKB|E2R8M0 [details] [associations]
symbol:TRNT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042780 "tRNA 3'-end processing"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004810 "tRNA adenylyltransferase
activity" evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
[GO:0009022 "tRNA nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743 GO:GO:0005739
GO:GO:0005813 GO:GO:0000049 KO:K00974 GO:GO:0004810
GeneTree:ENSGT00390000009678 GO:GO:0042780 GO:GO:0009022 CTD:51095
OMA:CELLKYQ PANTHER:PTHR13734:SF11 EMBL:AAEX03012103
RefSeq:XP_533758.3 Ensembl:ENSCAFT00000009663 GeneID:476552
KEGG:cfa:476552 Uniprot:E2R8M0
Length = 436
Score = 158 (60.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 69/218 (31%), Positives = 99/218 (45%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
LR+AGG VRD L G D+D A T + ++A G +I N
Sbjct: 59 LRIAGGAVRDLLNGVKPQDVDFA---------TTATPAQMKDMFQSA--GIRMI--NNKG 105
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
KH T T +L++ + LR D + R + F T ++DA RRDLTINS+F +
Sbjct: 106 EKH-GTITARLHEENFEITTLRI-DVVTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFD 163
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRF-GARFDFILDEELKKAA 273
+ + G DLK+ K+ K +D LR+LR RF G D D + +
Sbjct: 164 GTLFDYFNG--YEDLKNKKVRFVGNAKQRIQEDYLRILRYFRFYGKIIDKPGDHDPETLE 221
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
A E LA IS ER+ E+ ++ GN V + H+
Sbjct: 222 AIAENAKGLAG-ISGERIWVELKKILVGNH-VNHLIHL 257
>UNIPROTKB|F1NMW8 [details] [associations]
symbol:TRNT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009022 "tRNA nucleotidyltransferase activity"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA] [GO:0004810
"tRNA adenylyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0042780 "tRNA 3'-end processing" evidence=IEA]
InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743 GO:GO:0005739
GO:GO:0005813 GO:GO:0000049 GO:GO:0004810
GeneTree:ENSGT00390000009678 GO:GO:0042780 GO:GO:0009022
PANTHER:PTHR13734:SF11 EMBL:AADN02014470 IPI:IPI00601500
Ensembl:ENSGALT00000028052 OMA:HEKETIE Uniprot:F1NMW8
Length = 157
Score = 136 (52.9 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 55/162 (33%), Positives = 74/162 (45%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
LR+AGG VRD L G D+D A T E + +A GV N
Sbjct: 13 LRIAGGAVRDLLSGMTPQDVDFA---------TTATPEQMKDMFTSA----GVRLINNKG 59
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
KH T T +L++ + LR D + R + F T E+DA RRDLT+NS+F ++
Sbjct: 60 EKH-GTITARLHEQNFEITTLRI-DIVTDGRHAEVEFTTDWEKDAERRDLTVNSMFLGLD 117
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIR 256
+ D G DLK+ KI A +D LR+LR R
Sbjct: 118 -GMLYDFFN-GYEDLKNKKIRFVGKASARIQEDYLRILRYFR 157
>TIGR_CMR|SO_0872 [details] [associations]
symbol:SO_0872 "polyA polymerase" species:211586
"Shewanella oneidensis MR-1" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] InterPro:IPR002646 InterPro:IPR010206
Pfam:PF01743 GO:GO:0005524 GO:GO:0006378 GO:GO:0003723
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR026007
PANTHER:PTHR13734:SF5 GO:GO:0004652 KO:K00970 OMA:RFMAKLD
InterPro:IPR025866 Pfam:PF12626 TIGRFAMs:TIGR01942
HOGENOM:HOG000256526 RefSeq:NP_716503.2 ProteinModelPortal:Q8EIG7
GeneID:1168719 KEGG:son:SO_0872 PATRIC:23521405
ProtClustDB:CLSK905987 Uniprot:Q8EIG7
Length = 478
Score = 158 (60.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 51/175 (29%), Positives = 81/175 (46%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLG + D D+ + N E K+ G V +
Sbjct: 76 LVGGGVRDLLLGLEPKDFDV-VTNATPEEIK-KLFRNCRVVGRRFRLAHIVFGRDV---- 129
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR-FGTAEEDAYRRDLTINSLFYNINTS 216
+E AT + + N + + R+ +G +EDA RRD T+N+L+Y+I+
Sbjct: 130 -IEVATFRGHH---GESNEKISKANAEGRLLRDNVYGEIDEDAERRDFTVNALYYDISDY 185
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
S+ G G+ DLK G + P+ + +DP+R+LRA+RF + +DE K
Sbjct: 186 SIRSYGG-GMEDLKAGTLRLIGDPETRYREDPVRMLRAVRFATKLSMTIDEVTAK 239
>TIGR_CMR|CPS_4310 [details] [associations]
symbol:CPS_4310 "polyA polymerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006401 "RNA
catabolic process" evidence=ISS] InterPro:IPR002646
InterPro:IPR010206 Pfam:PF01743 GO:GO:0005524 GO:GO:0006378
GO:GO:0003723 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0617 InterPro:IPR026007 PANTHER:PTHR13734:SF5
GO:GO:0004652 HOGENOM:HOG000256527 KO:K00970 OMA:RFMAKLD
InterPro:IPR025866 Pfam:PF12626 TIGRFAMs:TIGR01942
RefSeq:YP_270960.1 ProteinModelPortal:Q47W62 STRING:Q47W62
GeneID:3519879 KEGG:cps:CPS_4310 PATRIC:21471471
BioCyc:CPSY167879:GI48-4320-MONOMER Uniprot:Q47W62
Length = 474
Score = 157 (60.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 65/231 (28%), Positives = 100/231 (43%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT--KVAEYLSATGETAPSGFGVIPSNPDQ 155
+ GG VRD LLG D DIA N E + + A FG
Sbjct: 67 LVGGGVRDILLGFKPKDFDIAT-NATPDEIKELFRNCRLIGRRFRLAHIVFG-------- 117
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR----FGTAEEDAYRRDLTINSLFY 211
+ +E AT + + C+ S+ S + +G+ EEDA RRD TIN+L+Y
Sbjct: 118 REIIEVATFRGHHDNASEQEKSCKKTSKQSEDGMLLRDNIYGSIEEDAERRDFTINALYY 177
Query: 212 NINTSSVEDLTGRGIADLKHGKIVTPL-PPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
+ V D G+ D+ + K++ + P+ + +DP+R+LRAIRF + D + ++ K
Sbjct: 178 SAKDFKVYDFAN-GVQDV-NDKVIRLIGDPETRYREDPVRMLRAIRFATKLDMQISDDTK 235
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
A E+ + L A I R+ E M + V + LF F
Sbjct: 236 --APIKEL-STLMANIPAARLFEEFLKMFIAGKAVANFEQLRSYNLFGYFF 283
>TIGR_CMR|DET_0409 [details] [associations]
symbol:DET_0409 "polyA polymerase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006396 "RNA
processing" evidence=ISS] [GO:0016779 "nucleotidyltransferase
activity" evidence=ISS] InterPro:IPR002646 Pfam:PF01743
GO:GO:0005524 GO:GO:0003723 GO:GO:0006396 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0617 KO:K00974 GO:GO:0016779
RefSeq:YP_181154.1 ProteinModelPortal:Q3Z9E5 STRING:Q3Z9E5
GeneID:3230288 KEGG:det:DET0409 PATRIC:21607887
HOGENOM:HOG000275430 OMA:WAHFLAS ProtClustDB:CLSK837513
BioCyc:DETH243164:GJNF-409-MONOMER Uniprot:Q3Z9E5
Length = 418
Score = 148 (57.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 58/214 (27%), Positives = 93/214 (43%)
Query: 93 ETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSN 152
E L + GG VRD LL K D D+ + F + + S T FG + ++
Sbjct: 33 EASLYLVGGLVRDCLLDKTPKDADLVI-TANAIRFGQDLLQGTSYK-TTLHHRFGNLSAD 90
Query: 153 PDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYN 212
+ K +D R E Y ++P + G + D +RRD IN++ +
Sbjct: 91 INGFK-------------LDITTARSEVYPAPGKLPEVGAGDIKADLFRRDFKINAMAIS 137
Query: 213 INTSSVEDLTGR--GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
++ + L G+ DLK GK+ + L PK+ F DDP R+ RA+R+ R F + E
Sbjct: 138 LSQQNSGCLVDPYDGLTDLKQGKL-SVLHPKS-FQDDPSRIWRALRYSERLGFDISAETL 195
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
D L I +R+ EI+ ++ +P
Sbjct: 196 ALLKRD---MQLIPLIGADRLRYEIECVLEEAKP 226
>FB|FBgn0037369 [details] [associations]
symbol:CG2100 species:7227 "Drosophila melanogaster"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0009022 "tRNA
nucleotidyltransferase activity" evidence=IEA] [GO:0042780 "tRNA
3'-end processing" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR002646 InterPro:IPR026973 Pfam:PF01743
EMBL:AE014297 GO:GO:0005739 GO:GO:0022008 GO:GO:0003723 KO:K00974
GeneTree:ENSGT00390000009678 GO:GO:0004652 GO:GO:0042780
GO:GO:0009022 OMA:CELLKYQ PANTHER:PTHR13734:SF11 HSSP:Q96Q11
FlyBase:FBgn0037369 ChiTaRS:CG2100 EMBL:AY058485
RefSeq:NP_001163512.1 RefSeq:NP_649578.1 UniGene:Dm.28328
SMR:Q9VNH2 IntAct:Q9VNH2 STRING:Q9VNH2 EnsemblMetazoa:FBtr0078724
EnsemblMetazoa:FBtr0301574 GeneID:40707 KEGG:dme:Dmel_CG2100
UCSC:CG2100-RA InParanoid:Q9VNH2 GenomeRNAi:40707 NextBio:820165
Uniprot:Q9VNH2
Length = 477
Score = 147 (56.8 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 74/250 (29%), Positives = 107/250 (42%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
LR+AGG VRD L+G DID+A T + + E V N +
Sbjct: 90 LRIAGGAVRDILMGIPPKDIDLA---------TTATPDQMKQMFEKEE----VRMINANG 136
Query: 156 SKHLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
KH T T ++ D + LR + ++ M + DA RRDLTINS+F +
Sbjct: 137 EKH-GTITPRINDKENFEVTTLRIDIRTDGRHAEVMYTTDWQLDANRRDLTINSMFLGFD 195
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+V D G DL+ ++V +D LR+LR RF R + K A
Sbjct: 196 -GTVYDYF-YGYDDLQERRVVFVGEADIRIKEDFLRILRYFRFYGRIASEENNHDKATLA 253
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEG 334
+ + A A+IS ER+ +E+ +V GN + LF + LP EP L+
Sbjct: 254 AIKENAKGLARISGERIWSELQKIVPGNFGAALFLEMHRCNLFEYI-GLPK--EP-YLDE 309
Query: 335 CEMFCTAYLD 344
+ C A LD
Sbjct: 310 FDRLCKA-LD 318
>TIGR_CMR|CJE_0880 [details] [associations]
symbol:CJE_0880 "polyA polymerase family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0006396 "RNA
processing" evidence=ISS] [GO:0016779 "nucleotidyltransferase
activity" evidence=ISS] InterPro:IPR002646 Pfam:PF01743
GO:GO:0005524 GO:GO:0003723 GO:GO:0006396 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0617 KO:K00974 GO:GO:0016779
RefSeq:YP_178882.1 ProteinModelPortal:Q5HV03 STRING:Q5HV03
GeneID:3231393 KEGG:cjr:CJE0880 PATRIC:20043527
HOGENOM:HOG000102970 OMA:NAMMINI ProtClustDB:CLSK878933
BioCyc:CJEJ195099:GJC0-900-MONOMER Uniprot:Q5HV03
Length = 343
Score = 124 (48.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 199 AYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFG 258
A RRD TINS+ N+ D G G+ DL+ G + + K +F +D LRVLRA+ F
Sbjct: 84 AKRRDFTINSMMINLFNDEFLDFYG-GLKDLEAG-FLRHID-KQSFQEDSLRVLRAVVFA 140
Query: 259 ARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
+RF+F + E K S ++ +S++R+ E+
Sbjct: 141 SRFNFKITSESLKLMQSMDI-----TDLSKDRINAEL 172
Score = 59 (25.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG 139
+ GG VRD LG D DI L ++ +F K+ + L A G
Sbjct: 1 MVGGSVRDLFLGLKICDYDIELYDIKPKDFE-KIMQKLGAQG 41
>TAIR|locus:2010439 [details] [associations]
symbol:AT1G28090 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006396 "RNA processing"
evidence=IEA;ISS] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002646 Pfam:PF01743 EMBL:CP002684
GO:GO:0003723 GO:GO:0006396 GO:GO:0016779 IPI:IPI00536358
RefSeq:NP_174130.2 UniGene:At.40938 ProteinModelPortal:F4HUW0
SMR:F4HUW0 PRIDE:F4HUW0 EnsemblPlants:AT1G28090.1 GeneID:839702
KEGG:ath:AT1G28090 OMA:LPIQASY PhylomeDB:F4HUW0 Uniprot:F4HUW0
Length = 541
Score = 141 (54.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIR 256
++ +RD T+N L ++ + + V D G G+ DL++ K+ T +F++D R+LRAIR
Sbjct: 205 KNCLQRDFTVNGLMFDPSENVVYDYIG-GVEDLRNSKVRTVSAANLSFVEDTARILRAIR 263
Query: 257 FGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTL 316
AR F L +++ A + E+ ++L ++ R+ EI+ M++ ++ + L
Sbjct: 264 IAARLGFSLTKDV--AISVKELSSSLL-RLDPSRIRMEINYMLAYGSAEASLRLLWRFGL 320
Query: 317 FWIVFKLPLQVEPEVLEG 334
I+ LP+Q V +G
Sbjct: 321 MEIL--LPIQASYLVSQG 336
Score = 43 (20.2 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 83 LLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDI 117
+LN L+ + L GG VRD +L + D D+
Sbjct: 104 VLNKLKKKGFQVYL--VGGCVRDLILDRIPKDFDV 136
>TIGR_CMR|BA_1559 [details] [associations]
symbol:BA_1559 "polyA polymerase" species:198094 "Bacillus
anthracis str. Ames" [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] HAMAP:MF_01263 InterPro:IPR002646
InterPro:IPR023068 Pfam:PF01743 GO:GO:0005524 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
GO:GO:0042245 eggNOG:COG0617 KO:K00974 GO:GO:0052929 GO:GO:0052928
GO:GO:0052927 GO:GO:0004810 GO:GO:0001680 RefSeq:NP_844009.1
RefSeq:YP_018182.1 RefSeq:YP_027715.1 ProteinModelPortal:Q81ST6
DNASU:1086405 EnsemblBacteria:EBBACT00000009983
EnsemblBacteria:EBBACT00000015215 EnsemblBacteria:EBBACT00000020653
GeneID:1086405 GeneID:2815636 GeneID:2850380 KEGG:ban:BA_1559
KEGG:bar:GBAA_1559 KEGG:bat:BAS1446 HOGENOM:HOG000253346
OMA:YALLLYN ProtClustDB:PRK13299
BioCyc:BANT260799:GJAJ-1520-MONOMER
BioCyc:BANT261594:GJ7F-1583-MONOMER GO:GO:0016437
InterPro:IPR026007 PANTHER:PTHR13734:SF5 Uniprot:Q81ST6
Length = 397
Score = 128 (50.1 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 46/155 (29%), Positives = 74/155 (47%)
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
ED+ S + +R + EED RRD T+N++ V+ G+ ++ +IVT
Sbjct: 89 EDFRRPSSVQFVR--SLEEDLKRRDFTMNAIAMTEEGEMVDLFAGQEA--IQKREIVTVG 144
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
F +D LR++R IRF + F L+ + K+A E L I+ ER+ E + +
Sbjct: 145 NAADRFQEDALRMMRGIRFVSTLGFSLETKTKQAI---ETYGHLLEHIAIERITVEFEKL 201
Query: 299 VSGNQPVKAMTHICGLTLFWIVFKLP-LQVEPEVL 332
++G VK + + LF LP LQ+ E L
Sbjct: 202 LTGTYCVKGLKELVETKLF---SHLPYLQMSEERL 233
Score = 51 (23.0 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 81 SCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIA 118
S ++ TL+ E GG VRD ++ + DIDIA
Sbjct: 8 SSIIETLKQQGHEAYF--VGGSVRDLIIDRPIGDIDIA 43
>UNIPROTKB|Q9KPC6 [details] [associations]
symbol:cca "Multifunctional CCA protein" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004810 "tRNA
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] HAMAP:MF_01261 InterPro:IPR002646
InterPro:IPR003607 InterPro:IPR006674 InterPro:IPR012006
Pfam:PF01743 Pfam:PF01966 PIRSF:PIRSF000813 SMART:SM00471
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003723 GO:GO:0006396 GO:GO:0042245 GO:GO:0008081
eggNOG:COG0617 KO:K00974 GO:GO:0052929 GO:GO:0052928 GO:GO:0052927
GO:GO:0004810 GO:GO:0001680 OMA:LVSDQHQ ProtClustDB:PRK10885
PIR:D82076 RefSeq:NP_232075.1 ProteinModelPortal:Q9KPC6
DNASU:2612988 GeneID:2612988 KEGG:vch:VC2446 PATRIC:20083913
Uniprot:Q9KPC6
Length = 403
Score = 123 (48.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 41/114 (35%), Positives = 58/114 (50%)
Query: 194 TAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
T EED RRDLTIN++ + N+ + D G G DL K++ + P F++DPLRVLR
Sbjct: 83 TLEEDLLRRDLTINAMAQD-NSGQLIDPYG-GQRDLA-AKVLRHVSP--AFVEDPLRVLR 137
Query: 254 AIRFGARFD---FILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
RF A+ F + EE + A L ++ ERV E +S + P
Sbjct: 138 VARFAAKLHHLGFTVAEETMQLMAKIAQSGELQ-HLTAERVWQEWHKSLSAHHP 190
Score = 50 (22.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP 143
+ GG VRD+LL YD D + +GS +A A G+ P
Sbjct: 5 LVGGAVRDQLLQLPVYDRDWVV---VGSSPQAMLAAGFQAVGKDFP 47
>TIGR_CMR|VC_2446 [details] [associations]
symbol:VC_2446 "tRNA nucleotidyltransferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004810 "tRNA
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] HAMAP:MF_01261 InterPro:IPR002646
InterPro:IPR003607 InterPro:IPR006674 InterPro:IPR012006
Pfam:PF01743 Pfam:PF01966 PIRSF:PIRSF000813 SMART:SM00471
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003723 GO:GO:0006396 GO:GO:0042245 GO:GO:0008081
eggNOG:COG0617 KO:K00974 GO:GO:0052929 GO:GO:0052928 GO:GO:0052927
GO:GO:0004810 GO:GO:0001680 OMA:LVSDQHQ ProtClustDB:PRK10885
PIR:D82076 RefSeq:NP_232075.1 ProteinModelPortal:Q9KPC6
DNASU:2612988 GeneID:2612988 KEGG:vch:VC2446 PATRIC:20083913
Uniprot:Q9KPC6
Length = 403
Score = 123 (48.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 41/114 (35%), Positives = 58/114 (50%)
Query: 194 TAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
T EED RRDLTIN++ + N+ + D G G DL K++ + P F++DPLRVLR
Sbjct: 83 TLEEDLLRRDLTINAMAQD-NSGQLIDPYG-GQRDLA-AKVLRHVSP--AFVEDPLRVLR 137
Query: 254 AIRFGARFD---FILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
RF A+ F + EE + A L ++ ERV E +S + P
Sbjct: 138 VARFAAKLHHLGFTVAEETMQLMAKIAQSGELQ-HLTAERVWQEWHKSLSAHHP 190
Score = 50 (22.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP 143
+ GG VRD+LL YD D + +GS +A A G+ P
Sbjct: 5 LVGGAVRDQLLQLPVYDRDWVV---VGSSPQAMLAAGFQAVGKDFP 47
>TIGR_CMR|CHY_2440 [details] [associations]
symbol:CHY_2440 "polyA polymerase/tRNA
nucleotidyltransferase family protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006396 "RNA
processing" evidence=ISS] [GO:0016779 "nucleotidyltransferase
activity" evidence=ISS] InterPro:IPR002646 InterPro:IPR003607
InterPro:IPR006674 Pfam:PF01743 Pfam:PF01966 SMART:SM00471
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0003723 GO:GO:0006396 GO:GO:0008081 eggNOG:COG0617
GO:GO:0016779 KO:K00970 RefSeq:YP_361234.1
ProteinModelPortal:Q3A9F0 STRING:Q3A9F0 GeneID:3727529
KEGG:chy:CHY_2440 PATRIC:21277945 OMA:GWTFHGH
BioCyc:CHYD246194:GJCN-2439-MONOMER Uniprot:Q3A9F0
Length = 441
Score = 118 (46.6 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 46/155 (29%), Positives = 73/155 (47%)
Query: 192 FGTA-EEDAYRRDLTINSLFYNINTS---SVEDLTGRGIADLKHGKIVTPLPPKATFLDD 247
FG + EED RRD T+N+L +N V DL G G DL+ +I+ + + L+D
Sbjct: 87 FGESLEEDLRRRDFTVNALALPVNGEFPREVIDLFG-GRNDLQ-ARIIRMISAE-NILED 143
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
P+R+LR IR F +++E ++ K+ ERV E+ + + +P
Sbjct: 144 PVRILRGIRLAGELGFAVEQETM-VVFKQYIQ--YIKKMPGERVAEELKKIFT-LKPAVP 199
Query: 308 MTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAY 342
M + T F+ VF L L+ E+ + T Y
Sbjct: 200 MVDMLFHTGFFEVFNLGLKEGYELYQNYHHSETVY 234
Score = 52 (23.4 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 83 LLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIA 118
+L +R ++ GG VRD LL + D+D+A
Sbjct: 3 ILQKVREVIKDSKTYFVGGSVRDMLLSRPVKDVDLA 38
>TIGR_CMR|GSU_2184 [details] [associations]
symbol:GSU_2184 "polyA polymerase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006396 "RNA
processing" evidence=ISS] [GO:0016779 "nucleotidyltransferase
activity" evidence=ISS] InterPro:IPR002646 Pfam:PF01743
GO:GO:0005524 GO:GO:0003723 GO:GO:0006396 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016779 KO:K00970
RefSeq:NP_953233.1 ProteinModelPortal:Q74B57 GeneID:2686725
KEGG:gsu:GSU2184 PATRIC:22027223 HOGENOM:HOG000275979 OMA:TITMESA
ProtClustDB:CLSK828738 BioCyc:GSUL243231:GH27-2193-MONOMER
Uniprot:Q74B57
Length = 430
Score = 116 (45.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 46/150 (30%), Positives = 66/150 (44%)
Query: 193 GTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVL 252
GT D RD TIN+L + + + D G G ADL +++ A F DPLR++
Sbjct: 99 GTIAADLALRDFTINALAVSCGSDDLLDPLG-GAADLAQ-RVIRACSAGA-FAADPLRIV 155
Query: 253 RAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI- 311
RA RF A DF + A D A L A ++ ER+ E+ M+ V + +
Sbjct: 156 RAYRFAAHLDFEI-HAATLALIPDH--APLLATVAGERIRDELFRMLDLPHAVPYVLKMS 212
Query: 312 C-GLT-LFWIVFKLPLQVEPEVLEGCEMFC 339
C G+T + LP L+ E C
Sbjct: 213 CAGVTGAIFGADDLPADTAAGALDRVESLC 242
Score = 51 (23.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 100 GGWVRDKLLGKDCYDIDIAL 119
GG VRD LL + DIDI +
Sbjct: 32 GGCVRDALLARPSNDIDIVV 51
>TIGR_CMR|CPS_4215 [details] [associations]
symbol:CPS_4215 "tRNA nucleotidyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004810 "tRNA
adenylyltransferase activity" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] HAMAP:MF_01261 HAMAP:MF_01262
InterPro:IPR002646 InterPro:IPR003607 InterPro:IPR006674
InterPro:IPR012006 Pfam:PF01743 Pfam:PF01966 PIRSF:PIRSF000813
SMART:SM00471 GO:GO:0005524 GO:GO:0046872 GO:GO:0003723
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0042245 GO:GO:0008081
eggNOG:COG0617 KO:K00974 GO:GO:0052929 GO:GO:0052928 GO:GO:0052927
GO:GO:0004810 GO:GO:0001680 HOGENOM:HOG000007368 OMA:LVSDQHQ
RefSeq:YP_270865.1 ProteinModelPortal:Q47WF7 STRING:Q47WF7
GeneID:3523071 KEGG:cps:CPS_4215 PATRIC:21471291
BioCyc:CPSY167879:GI48-4225-MONOMER Uniprot:Q47WF7
Length = 445
Score = 121 (47.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 40/114 (35%), Positives = 64/114 (56%)
Query: 194 TAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
T E+D RRDLT+N++ + N ++ G+ DL + +I+ + F++DPLRVLR
Sbjct: 95 TIEQDLLRRDLTVNAMAMDHNGKIIDPYNGQN--DL-NDRILRHVSD--AFIEDPLRVLR 149
Query: 254 AIRFGARFD---F-ILDEEL---KKAAASDEVKAALAAKISRERVGTEIDLMVS 300
RF AR+ F I DE L ++ +AS E+K ++ ERV E+ L ++
Sbjct: 150 VARFAARYHKYGFTIADETLTLMQEISASGELKC-----LTPERVWQEMQLSLA 198
Score = 46 (21.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 91 NLETVLRVAGGWVRDKLLGKDCYDID 116
N E + GG VRDKLL + D D
Sbjct: 10 NSELNSYLVGGAVRDKLLNRPIKDED 35
>UNIPROTKB|P06961 [details] [associations]
symbol:cca "fused tRNA nucleotidyltransferase /
2',3'-cyclic phosphodiesterase / 2' nucleotidase and phosphatase"
species:83333 "Escherichia coli K-12" [GO:0008081 "phosphoric
diester hydrolase activity" evidence=IEA] [GO:0052929
"ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity"
evidence=IEA] [GO:0052928 "CTP:3'-cytidine-tRNA
cytidylyltransferase activity" evidence=IEA] [GO:0052927 "CTP:tRNA
cytidylyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042245 "RNA repair" evidence=IEA;IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0001680 "tRNA 3'-terminal CCA addition" evidence=IEA;IDA;IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016437 "tRNA
cytidylyltransferase activity" evidence=IDA] [GO:0004810 "tRNA
adenylyltransferase activity" evidence=IEA;IDA] HAMAP:MF_01261
InterPro:IPR002646 InterPro:IPR003607 InterPro:IPR006674
InterPro:IPR012006 Pfam:PF01743 Pfam:PF01966 PIRSF:PIRSF000813
SMART:SM00471 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0003723 EMBL:U28379 GO:GO:0042245 GO:GO:0008081
eggNOG:COG0617 KO:K00974 GO:GO:0052929 GO:GO:0052928 GO:GO:0052927
GO:GO:0004810 GO:GO:0001680 GO:GO:0016437 HOGENOM:HOG000007368
EMBL:M12788 PIR:A25215 RefSeq:NP_417528.1 RefSeq:YP_491248.1
ProteinModelPortal:P06961 SMR:P06961 DIP:DIP-9250N IntAct:P06961
MINT:MINT-1263446 EnsemblBacteria:EBESCT00000002337
EnsemblBacteria:EBESCT00000017105 GeneID:12930261 GeneID:947553
KEGG:ecj:Y75_p2982 KEGG:eco:b3056 PATRIC:32121524 EchoBASE:EB0134
EcoGene:EG10136 OMA:LVSDQHQ ProtClustDB:PRK10885
BioCyc:EcoCyc:EG10136-MONOMER BioCyc:ECOL316407:JW3028-MONOMER
BioCyc:MetaCyc:EG10136-MONOMER BRENDA:3.1.4.16
Genevestigator:P06961 Uniprot:P06961
Length = 412
Score = 124 (48.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 41/115 (35%), Positives = 60/115 (52%)
Query: 194 TAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
T E+D RRDLTIN+L + N ++ G G DL++ +++ + P F +DPLRVLR
Sbjct: 83 TLEDDLKRRDLTINALAQDDNGEIIDPYNGLG--DLQN-RLLRHVSP--AFGEDPLRVLR 137
Query: 254 AIRFGARF---DF-ILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
RF AR+ F I DE L A + A ++ ERV E + ++ P
Sbjct: 138 VARFAARYAHLGFRIADETL--ALMREMTHAGELEHLTPERVWKETESALTTRNP 190
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 98 VAGGWVRDKLLGKDCYDID 116
+ GG VRD LLG D D
Sbjct: 5 LVGGAVRDALLGLPVKDRD 23
>UNIPROTKB|Q4K4W8 [details] [associations]
symbol:cca "Multifunctional CCA protein" species:220664
"Pseudomonas protegens Pf-5" [GO:0001680 "tRNA 3'-terminal CCA
addition" evidence=ISS] [GO:0004112 "cyclic-nucleotide
phosphodiesterase activity" evidence=ISS] [GO:0004810 "tRNA
adenylyltransferase activity" evidence=ISS] [GO:0016311
"dephosphorylation" evidence=ISS] [GO:0016437 "tRNA
cytidylyltransferase activity" evidence=ISS] [GO:0016791
"phosphatase activity" evidence=ISS] HAMAP:MF_01261
InterPro:IPR002646 InterPro:IPR003607 InterPro:IPR006674
InterPro:IPR012006 Pfam:PF01743 Pfam:PF01966 PIRSF:PIRSF000813
SMART:SM00471 GO:GO:0005524 GO:GO:0046872 GO:GO:0003723
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0016791 GO:GO:0042245
eggNOG:COG0617 KO:K00974 GO:GO:0052929 GO:GO:0052928 GO:GO:0052927
GO:GO:0004810 GO:GO:0001680 GO:GO:0016437 HOGENOM:HOG000007368
ProtClustDB:PRK10885 RefSeq:YP_262715.1 ProteinModelPortal:Q4K4W8
STRING:Q4K4W8 GeneID:3480031 KEGG:pfl:PFL_5656 PATRIC:19880813
OMA:PVREVNQ BioCyc:PFLU220664:GIX8-5695-MONOMER GO:GO:0004112
Uniprot:Q4K4W8
Length = 409
Score = 107 (42.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 39/115 (33%), Positives = 57/115 (49%)
Query: 194 TAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
T EED RRDLTIN++ + + G+ DL+ +++ + P F +DPLRVLR
Sbjct: 83 TLEEDLIRRDLTINAMAEDEQGRLTDPYNGQ--KDLEE-RLLRHVSP--AFAEDPLRVLR 137
Query: 254 AIRFGARF---DF-ILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
RF AR+ F + E L+ E L A ++ ER EI + +QP
Sbjct: 138 VARFAARYAGLGFRVAPETLELMRELSE-SGELQA-LTAERSWKEISRALMEDQP 190
Score = 56 (24.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATK 130
GG VRD+LLG+ DID + E K
Sbjct: 7 GGAVRDRLLGRPVTDIDWVVVGASAEEMLAK 37
>TIGR_CMR|NSE_0646 [details] [associations]
symbol:NSE_0646 "polyA polymerase family protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0006396
"RNA processing" evidence=ISS] [GO:0016779 "nucleotidyltransferase
activity" evidence=ISS] InterPro:IPR002646 InterPro:IPR026973
Pfam:PF01743 GO:GO:0005739 GO:GO:0005524 GO:GO:0003723
EMBL:CP000237 GenomeReviews:CP000237_GR eggNOG:COG0617
GO:GO:0042780 KO:K00970 GO:GO:0009022 HOGENOM:HOG000253345
PANTHER:PTHR13734:SF11 RefSeq:YP_506524.1 ProteinModelPortal:Q2GDC2
STRING:Q2GDC2 GeneID:3931972 KEGG:nse:NSE_0646 PATRIC:22681319
OMA:YLWRESS ProtClustDB:CLSK749643
BioCyc:NSEN222891:GHFU-660-MONOMER Uniprot:Q2GDC2
Length = 392
Score = 118 (46.6 bits), Expect = 0.00056, P = 0.00056
Identities = 45/150 (30%), Positives = 73/150 (48%)
Query: 153 PDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFY 211
P KH T T+ + I+ LR +D + R T+ F + +EDA RRD T N+++
Sbjct: 68 PTGLKH-GTFTVLVNSRPIEITTLR-QDLHCDGRHATVSFTDSWKEDAQRRDFTFNAMYI 125
Query: 212 NINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF-DFILDEELK 270
+I ++ D G+ DL++ ++ P +D LR+LRA RF A L EE+
Sbjct: 126 DIE-GNIHDYFS-GLEDLQNRRLKFVGEPHQRIEEDYLRILRAFRFQASICKTPLSEEIL 183
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVS 300
A K + +S ER+ E+ ++S
Sbjct: 184 HACTKYRKKIS---SLSGERIQGEMFKLLS 210
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 523 510 0.00087 119 3 11 22 0.50 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 621 (66 KB)
Total size of DFA: 286 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.51u 0.14s 43.65t Elapsed: 00:00:02
Total cpu time: 43.51u 0.14s 43.65t Elapsed: 00:00:02
Start: Sat May 11 11:43:28 2013 End: Sat May 11 11:43:30 2013