BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009892
(523 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255586471|ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus communis]
gi|223526180|gb|EEF28510.1| poly(A) polymerase, putative [Ricinus communis]
Length = 577
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/523 (67%), Positives = 411/523 (78%), Gaps = 12/523 (2%)
Query: 1 MRVALASTIKQNPLLLTISSFLYRPPTKTVSFRNIFTVNTTRNL-GFLR----CKATMSE 55
MR L + I P+ L + L R T +FRN F T R L FLR C+A M
Sbjct: 1 MRPYLNAAINLRPIQLLLPP-LLRSSTSAFAFRN-FRPETPRYLHSFLRRRFSCRA-MGT 57
Query: 56 QEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDI 115
P V+QV+DKIELT+ E KIF LLNTLRHFNL+T LRVAGGWVRDKLLGKDCYDI
Sbjct: 58 STPQ--AVIQVKDKIELTEIEKKIFDRLLNTLRHFNLQTQLRVAGGWVRDKLLGKDCYDI 115
Query: 116 DIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVN 175
DIA+DNM+GSEF KV EYL +TGE G G+IP NPDQSKHLETA M+L+DLWIDFVN
Sbjct: 116 DIAIDNMLGSEFVDKVREYLLSTGEEV-GGLGIIPRNPDQSKHLETARMRLFDLWIDFVN 174
Query: 176 LRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIV 235
LRCEDY+E+SRIPTM+FGTAEEDA+RRDLTINSLFYNINTSSVEDLT RGI DLK GKIV
Sbjct: 175 LRCEDYTEDSRIPTMKFGTAEEDAFRRDLTINSLFYNINTSSVEDLTERGIEDLKFGKIV 234
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
TPLPPKATFLDDPLRVLRAIRFGARF FILDEELK+AAA D+VK ALAAKIS+ER+G EI
Sbjct: 235 TPLPPKATFLDDPLRVLRAIRFGARFGFILDEELKEAAACDDVKNALAAKISKERIGNEI 294
Query: 296 DLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGS 355
DLM+SGNQPVKAMT+I LTLFWI+F LP +VEP V EGC C AYLDA W+L Q I S
Sbjct: 295 DLMLSGNQPVKAMTYIGDLTLFWIIFGLPPKVEPAVSEGCHKLCIAYLDATWNLIQSIRS 354
Query: 356 STFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRV 415
S F D+QRRLS YAALFLPFRN Y + KGK +PVVN+ F+DSLK+KASD+ETVM IH+
Sbjct: 355 SFFTDEQRRLSLYAALFLPFRNIIYIE-KGKNVPVVNFIFKDSLKQKASDSETVMKIHKS 413
Query: 416 LEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLIST 475
LEKFL++IP L S +D + + W+ EL+DVP ++KLRVLTGFLLREIK FWRVALLIST
Sbjct: 414 LEKFLNIIPLLTSDDDTQPAEVDWALELIDVPFSAKLRVLTGFLLREIKDFWRVALLIST 473
Query: 476 LLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIF 518
++YP +D T+ L++ F+LD +++LF E AITK G+ I+
Sbjct: 474 MIYPADIDSTQSFLDKQFELDKRKELFKTVEDAITKQGLEKIW 516
>gi|224135935|ref|XP_002327340.1| predicted protein [Populus trichocarpa]
gi|222835710|gb|EEE74145.1| predicted protein [Populus trichocarpa]
Length = 528
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/470 (71%), Positives = 381/470 (81%), Gaps = 2/470 (0%)
Query: 51 ATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK 110
AT+S + R V++V+DKIEL + E +IF L+NTLRHFNL T LRVAGGWVRDKLLGK
Sbjct: 2 ATVSSEAAAR-AVIEVKDKIELNEVEKQIFDRLVNTLRHFNLNTELRVAGGWVRDKLLGK 60
Query: 111 DCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLW 170
+C DIDIA+DNM+GSEF KV EYL +TGE A G GVIP NPDQSKHLETA M+L DLW
Sbjct: 61 ECCDIDIAIDNMLGSEFVDKVREYLLSTGEEA-HGVGVIPRNPDQSKHLETARMRLLDLW 119
Query: 171 IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLK 230
IDFVNLR EDYSENSRIPTM FGTA+EDAYRRDLTINSLFYNINTSSVEDLTGRGI DLK
Sbjct: 120 IDFVNLRSEDYSENSRIPTMTFGTAKEDAYRRDLTINSLFYNINTSSVEDLTGRGIEDLK 179
Query: 231 HGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRER 290
GKIVTPLPPK TFLDDPLRVLRAIRFGARF F+L+EELK+AAA D+VK AL AKIS+ER
Sbjct: 180 SGKIVTPLPPKDTFLDDPLRVLRAIRFGARFGFVLEEELKEAAACDDVKNALKAKISKER 239
Query: 291 VGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLT 350
+GTEIDLM+SGNQPVKAMT+I LTLFW+VF L +VEP V E C+ C AYLDAAW+L
Sbjct: 240 IGTEIDLMISGNQPVKAMTYIADLTLFWVVFNLHPKVEPTVSEECQGLCVAYLDAAWNLI 299
Query: 351 QLIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVM 410
LIG S+F +QRRL YAALFLP RNT YKD KGKK+PVVNY FRDSLK+KASD ETV+
Sbjct: 300 HLIGGSSFTGEQRRLCLYAALFLPLRNTIYKDEKGKKVPVVNYIFRDSLKQKASDPETVI 359
Query: 411 NIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVA 470
IHR LEKFL+LIP L S +D + + EL DVP SKLRV TGFLLRE+K+FWRV
Sbjct: 360 KIHRSLEKFLTLIPLLTSNDDTQPAEVDMGMELFDVPITSKLRVATGFLLREVKEFWRVG 419
Query: 471 LLISTLLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIFFL 520
LLIST+LYP+ D T+D L + F+LD ++DLF AAE AI LG+ ++ L
Sbjct: 420 LLISTMLYPSDTDSTQDFLEKKFELDRRKDLFKAAEDAIVNLGLERVWDL 469
>gi|449446353|ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
[Cucumis sativus]
Length = 577
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/507 (66%), Positives = 393/507 (77%), Gaps = 11/507 (2%)
Query: 13 PLLLTISSFLYRPPTKTVSFRNIFTVNTTRNLGFLRCKATMSEQEPPRPVVVQVRDKIEL 72
P L +SFL PP + F TTR F K+ + P+P+V QV+D IEL
Sbjct: 19 PSLSFPTSFLKFPPPHSP-----FKFPTTR---FPSPKSMTTAISSPKPLV-QVKDNIEL 69
Query: 73 TDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVA 132
T+TE KIF LL TLRHFNL+T LRVAGGWVRDKLLGKDCYDIDIALDNM+GSEF KV
Sbjct: 70 TETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDCYDIDIALDNMLGSEFVDKVR 129
Query: 133 EYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MR 191
EYL GE A G VIP NPDQSKHLETA M+++D+WIDFVNLRCE+YSENSRIPT +
Sbjct: 130 EYLLTVGEEA-QGVAVIPCNPDQSKHLETARMRIFDMWIDFVNLRCEEYSENSRIPTKQK 188
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
FGTAEEDAYRRDLTINSLFYNIN S VED T RGI+DLK GKIVTPLP KATF+DDPLRV
Sbjct: 189 FGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPLPAKATFMDDPLRV 248
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
LRAIRF ARF+F LDEELK+AAA +EVKAALAAKISRER+G EIDLM++GNQPVKAM++I
Sbjct: 249 LRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIGVEIDLMIAGNQPVKAMSYI 308
Query: 312 CGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAAL 371
LTLFW VF LP +EPE+ E C C A LDA W+L Q I TF+D+Q+RLS YA+L
Sbjct: 309 SDLTLFWTVFTLPSNIEPEISEVCNRLCVACLDATWNLIQHINCFTFSDEQKRLSLYASL 368
Query: 372 FLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAED 431
FLPFR T+KD K KKIP+VNY FRDSLKRKASDAETV+N+H+ LEKFLSLIP LVS E+
Sbjct: 369 FLPFRKFTFKDKKSKKIPIVNYIFRDSLKRKASDAETVVNVHQALEKFLSLIPLLVSKEE 428
Query: 432 VKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLLYPTHVDHTEDMLNQ 491
++ N W E DVP S++RVLTG LLREIK FW VALL++TLLYP VD+ +D+LN+
Sbjct: 429 IQPNGVDWGVECADVPATSRIRVLTGLLLREIKDFWPVALLMATLLYPADVDYAQDLLNR 488
Query: 492 HFQLDSKRDLFVAAEKAITKLGMVSIF 518
HF+L+ +++LF I KLG+ +++
Sbjct: 489 HFELEKRKELFDDVYNEIVKLGLENVW 515
>gi|449528369|ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
[Cucumis sativus]
Length = 577
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/461 (69%), Positives = 376/461 (81%), Gaps = 3/461 (0%)
Query: 59 PRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIA 118
P+P+V QV+D IELT+TE KIF LL TLRHFNL+T LRVAGGWVRDKLLGKDCYDIDIA
Sbjct: 57 PKPLV-QVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDCYDIDIA 115
Query: 119 LDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
LDNM+GSEF KV EYL GE A G VIP NPDQSKHLETA M+++D+WIDFVNLRC
Sbjct: 116 LDNMLGSEFVDKVREYLLTVGEEA-QGVAVIPCNPDQSKHLETARMRIFDMWIDFVNLRC 174
Query: 179 EDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTP 237
E+YSENSRIPT +FGTAEEDAYRRDLTINSLFYNIN S VED T RGI+DLK GKIVTP
Sbjct: 175 EEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTP 234
Query: 238 LPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDL 297
LP KATF+DDPLRVLRAIRF ARF+F LDEELK+AAA +EVKAALAAKISRER+G EIDL
Sbjct: 235 LPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIGVEIDL 294
Query: 298 MVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSST 357
M++GNQPVKAM++I LTLFW VF LP +EPE+ E C C A LDA W+L Q I T
Sbjct: 295 MIAGNQPVKAMSYISDLTLFWTVFTLPSNIEPEISEVCNRLCVACLDATWNLIQHINCFT 354
Query: 358 FNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLE 417
F+D+Q+RLS YA+LFLPFR T+KD K KKIP+VNY FRDSLKRKASDAETV+N+H+ LE
Sbjct: 355 FSDEQKRLSLYASLFLPFRKFTFKDKKSKKIPIVNYIFRDSLKRKASDAETVVNVHQALE 414
Query: 418 KFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLL 477
KFLSLIP LVS E+++ N W E DVP S++RVLTG LLREIK FW VALL++TLL
Sbjct: 415 KFLSLIPLLVSKEEIQPNGVDWGVECADVPATSRIRVLTGLLLREIKDFWPVALLMATLL 474
Query: 478 YPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIF 518
YP VD+ +D+LN+HF+L+ +++LF I KLG+ +++
Sbjct: 475 YPADVDYAQDLLNRHFELEKRKELFDDVYNEIVKLGLENVW 515
>gi|359493248|ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial [Vitis
vinifera]
Length = 564
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/504 (63%), Positives = 384/504 (76%), Gaps = 11/504 (2%)
Query: 22 LYRPPTKTVSFRNIFTVNTTRNLGF-----LRCKATMSEQEPPRPVVVQVRDKIELTDTE 76
LYR T + F + + GF L C+A S P VQVRD I+LT E
Sbjct: 11 LYRCQTHRLLQLQPFLLPCSTAFGFPTLSPLHCRAMASS-----PPSVQVRDSIDLTPKE 65
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
T+IF LL +RHF+L T LRVAGGWVRDKLLGK+CYDIDIALD+M+G EF K+ +YLS
Sbjct: 66 TQIFQKLLQVVRHFSLRTQLRVAGGWVRDKLLGKECYDIDIALDDMLGREFCEKINDYLS 125
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
TGE G GVI NPDQSKHLETA M+L+D WIDFVNLR EDYSENSRIPTMRFGTA+
Sbjct: 126 CTGEEK-QGIGVIQCNPDQSKHLETARMRLFDEWIDFVNLRSEDYSENSRIPTMRFGTAK 184
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIR 256
EDAYRRDLTINSLFYNINTSSVED TGRGI DLK GKIVTPLPPK TFLDDPLRVLRAIR
Sbjct: 185 EDAYRRDLTINSLFYNINTSSVEDFTGRGIEDLKSGKIVTPLPPKDTFLDDPLRVLRAIR 244
Query: 257 FGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTL 316
FGARF FILDEELK AA D+V+AA+A KISRER+G EIDLM+SGN+PVKAMT+IC L L
Sbjct: 245 FGARFGFILDEELKLAAGCDDVRAAIADKISRERIGHEIDLMISGNEPVKAMTYICDLLL 304
Query: 317 FWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFR 376
F +VF LP V+P + E C+ C Y+DA W+L QLIGSSTFND+QRRL YAALFLPFR
Sbjct: 305 FSVVFSLPPIVKPAISEECDRLCIGYIDAGWNLIQLIGSSTFNDEQRRLYLYAALFLPFR 364
Query: 377 NTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVND 436
T Y+ K +KIPVVN+ R+SLK +ASDA+TV++IH +EKF+SLIP + S E +++++
Sbjct: 365 KTLYEGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFISLIPFIESTESIQISE 424
Query: 437 GQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLLYPTHVDHTEDMLNQHFQLD 496
+W E++D+P SKLR+LTG LLREIK FWRVAL++STLLYP ++HT D+ +FQLD
Sbjct: 425 AEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLLYPNDINHTRDISKNNFQLD 484
Query: 497 SKRDLFVAAEKAITKLGMVSIFFL 520
+R +F E AI LG+ ++ L
Sbjct: 485 KRRKVFEMVENAIVGLGLEEVWEL 508
>gi|296081108|emb|CBI18302.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/460 (67%), Positives = 369/460 (80%), Gaps = 1/460 (0%)
Query: 61 PVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALD 120
P VQVRD I+LT ET+IF LL +RHF+L T LRVAGGWVRDKLLGK+CYDIDIALD
Sbjct: 5 PPSVQVRDSIDLTPKETQIFQKLLQVVRHFSLRTQLRVAGGWVRDKLLGKECYDIDIALD 64
Query: 121 NMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCED 180
+M+G EF K+ +YLS TGE G GVI NPDQSKHLETA M+L+D WIDFVNLR ED
Sbjct: 65 DMLGREFCEKINDYLSCTGEEK-QGIGVIQCNPDQSKHLETARMRLFDEWIDFVNLRSED 123
Query: 181 YSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPP 240
YSENSRIPTMRFGTA+EDAYRRDLTINSLFYNINTSSVED TGRGI DLK GKIVTPLPP
Sbjct: 124 YSENSRIPTMRFGTAKEDAYRRDLTINSLFYNINTSSVEDFTGRGIEDLKSGKIVTPLPP 183
Query: 241 KATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVS 300
K TFLDDPLRVLRAIRFGARF FILDEELK AA D+V+AA+A KISRER+G EIDLM+S
Sbjct: 184 KDTFLDDPLRVLRAIRFGARFGFILDEELKLAAGCDDVRAAIADKISRERIGHEIDLMIS 243
Query: 301 GNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFND 360
GN+PVKAMT+IC L LF +VF LP V+P + E C+ C Y+DA W+L QLIGSSTFND
Sbjct: 244 GNEPVKAMTYICDLLLFSVVFSLPPIVKPAISEECDRLCIGYIDAGWNLIQLIGSSTFND 303
Query: 361 DQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFL 420
+QRRL YAALFLPFR T Y+ K +KIPVVN+ R+SLK +ASDA+TV++IH +EKF+
Sbjct: 304 EQRRLYLYAALFLPFRKTLYEGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFI 363
Query: 421 SLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLLYPT 480
SLIP + S E +++++ +W E++D+P SKLR+LTG LLREIK FWRVAL++STLLYP
Sbjct: 364 SLIPFIESTESIQISEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLLYPN 423
Query: 481 HVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIFFL 520
++HT D+ +FQLD +R +F E AI LG+ ++ L
Sbjct: 424 DINHTRDISKNNFQLDKRRKVFEMVENAIVGLGLEEVWEL 463
>gi|1139585|gb|AAB03077.1| tRNA nucleotidyltransferase [Lupinus albus]
Length = 560
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/455 (68%), Positives = 369/455 (81%), Gaps = 5/455 (1%)
Query: 65 QVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMG 124
+VRD I+L+D E +IF LL TLR FNL+T LRVAGGWVRDKLLGK+CYDIDIALD MMG
Sbjct: 62 KVRDNIQLSDVEKRIFDRLLATLRFFNLQTHLRVAGGWVRDKLLGKECYDIDIALDKMMG 121
Query: 125 SEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSEN 184
+EF KV EYL + GE A G VI SNPDQSKHLETA M+L+D+WIDFVNLR E+Y++N
Sbjct: 122 TEFVDKVREYLLSIGEEA-QGVCVIESNPDQSKHLETARMRLFDMWIDFVNLRSEEYTDN 180
Query: 185 SRIPTM-RFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKAT 243
SRIP+M RFGT EEDAYRRDLTINSLFYNINT SVED T RGI+DLK GKIVTPLPPKAT
Sbjct: 181 SRIPSMQRFGTPEEDAYRRDLTINSLFYNINTDSVEDFTKRGISDLKSGKIVTPLPPKAT 240
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
FLDDPLRV+RAIRFGARF+F LDE+LK+AAA DEVK ALAAKISRER+GTEIDLM+SGNQ
Sbjct: 241 FLDDPLRVVRAIRFGARFEFTLDEDLKQAAACDEVKDALAAKISRERIGTEIDLMISGNQ 300
Query: 304 PVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQR 363
PVKAMT+IC LT+FWIVF LP EP + +GCE C + LD +W+L L+G +TF D+QR
Sbjct: 301 PVKAMTYICDLTIFWIVFSLPPTFEPAISDGCERLCISQLDISWNLIHLLGKTTFTDEQR 360
Query: 364 RLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLI 423
RL+ YAA+FLP RNT Y++ K KK+PVVNY FR+SLKRKA D ETV+++HR KFLSLI
Sbjct: 361 RLTLYAAMFLPLRNTIYREKKAKKVPVVNYIFRESLKRKAKDPETVLDLHRASNKFLSLI 420
Query: 424 PSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLLYPTHVD 483
P LVS EDV++ W EL+DVP +S++RVLTGFLLRE++ FWRVALLIS LL+P V+
Sbjct: 421 PCLVSNEDVQIVGHDWMTELIDVPVSSRVRVLTGFLLRELRDFWRVALLISILLHPIDVN 480
Query: 484 HTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIF 518
TED + QL +RDLF E ++ KLG+ ++
Sbjct: 481 DTED---ESSQLSKRRDLFNTVENSVIKLGLEKVW 512
>gi|356576137|ref|XP_003556190.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
[Glycine max]
Length = 575
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/456 (68%), Positives = 370/456 (81%), Gaps = 8/456 (1%)
Query: 64 VQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
+ +RDKI+L+D E +IF LL TLRHF+L+T LRVAGGWVRDKLLGK+CYDIDIALDNMM
Sbjct: 67 LHIRDKIDLSDIERRIFDRLLATLRHFHLQTQLRVAGGWVRDKLLGKECYDIDIALDNMM 126
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G+EF KV EYL + GE A G VI SNPDQSKHLETA M+L+D+WIDFVNLR E+Y+E
Sbjct: 127 GTEFVDKVREYLLSIGEDA-QGVCVIESNPDQSKHLETARMRLFDIWIDFVNLRSEEYTE 185
Query: 184 NSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKA 242
NSRIP+ RFGTAEEDAYRRDLTINSLFYNINT SVED T RGI+DLK GKIVTPLPPKA
Sbjct: 186 NSRIPSKQRFGTAEEDAYRRDLTINSLFYNINTDSVEDFTKRGISDLKSGKIVTPLPPKA 245
Query: 243 TFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN 302
TFLDDPLRVLRAIRFGARF+F LDE+LK AAA D+VK ALAAKISRER+GTEIDLM+SGN
Sbjct: 246 TFLDDPLRVLRAIRFGARFEFTLDEDLKVAAACDDVKDALAAKISRERIGTEIDLMISGN 305
Query: 303 QPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQ 362
QP+KAMT+IC LTLFWIVF LP + EP + +GCE C +YLD AW+L L+G STF +Q
Sbjct: 306 QPIKAMTYICDLTLFWIVFSLPPEFEPAISDGCERLCVSYLDTAWNLIHLLGESTFTAEQ 365
Query: 363 RRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSL 422
+RL+ AALFLP RN TY++ K KKIPVVN+ R+SLKRKA DAE V+N+H+ KFLSL
Sbjct: 366 KRLTLCAALFLPLRNVTYREKKAKKIPVVNHIIRESLKRKAKDAEMVLNLHQASYKFLSL 425
Query: 423 IPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLLYPTHV 482
IP L S+EDV+V D W ++LVDVP S++RVLTGFLLRE+K +W VALLIST+L+P
Sbjct: 426 IPCLASSEDVQVVDHDWLRDLVDVPVTSRVRVLTGFLLRELKDYWHVALLISTILHPI-- 483
Query: 483 DHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIF 518
D+ ++ QL +RDLF E +ITKLG+ ++
Sbjct: 484 ----DIKDEPSQLSKRRDLFNTVENSITKLGLEKVW 515
>gi|297845288|ref|XP_002890525.1| hypothetical protein ARALYDRAFT_335508 [Arabidopsis lyrata subsp.
lyrata]
gi|297336367|gb|EFH66784.1| hypothetical protein ARALYDRAFT_335508 [Arabidopsis lyrata subsp.
lyrata]
Length = 603
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 298/530 (56%), Positives = 370/530 (69%), Gaps = 26/530 (4%)
Query: 13 PLLLTISSFLYRPPTK--TVSFRNIFTVNTTRNLGFLRC---------KATMSEQEPPRP 61
PL L IS F YR P + TV+FR ++ + C + E++
Sbjct: 16 PLFL-ISPFRYRNPNRSLTVAFRTSSSLLRVSGVPSRLCCYWFSTKAMTTNVGEEDKQSI 74
Query: 62 VVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDN 121
+++++ IELTD E KIF LL+TLR+ NL+T LRVAGGWVRDKLLGK+ DIDIA+DN
Sbjct: 75 PPIELKENIELTDKERKIFDRLLSTLRYCNLDTQLRVAGGWVRDKLLGKESDDIDIAIDN 134
Query: 122 MMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDY 181
M GSEF K EYLS+ E G +I NPDQSKHLETA M++YD WIDFVNLR E+Y
Sbjct: 135 MSGSEFLDKFKEYLSSRDEEV-QGDTIIERNPDQSKHLETAKMRIYDQWIDFVNLRSEEY 193
Query: 182 SENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPK 241
+ENSRIPTM+FGTA+EDA+RRDLTINSLFYNIN+ SVEDLT RGI DLK GKIVTPLP K
Sbjct: 194 TENSRIPTMKFGTAKEDAFRRDLTINSLFYNINSGSVEDLTERGIDDLKSGKIVTPLPAK 253
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
ATFLDDPLRVLRAIRFGARF F LD+ELK+AA+S+EV+ AL KISRER+G EIDLM+SG
Sbjct: 254 ATFLDDPLRVLRAIRFGARFGFTLDDELKEAASSEEVRVALGEKISRERIGNEIDLMISG 313
Query: 302 NQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDD 361
N PV A+T++ L LF +VF LP EP E C AYL+A W L Q F+ +
Sbjct: 314 NGPVSAVTYLSELKLFPVVFSLPSSAEPSPSENCGSLSQAYLEAMWSLLQTPWLGNFSAE 373
Query: 362 QRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLS 421
QRRL YAA+FLPFR T YKD KGK IPVVN+ F+ S+KRK+SDAETVMNIH+ E+F S
Sbjct: 374 QRRLGMYAAMFLPFRKTVYKDKKGKSIPVVNHIFKFSMKRKSSDAETVMNIHQTTERFRS 433
Query: 422 LIPSLVSAEDVKVNDGQWSKELVD-----------VPDASKLRVLTGFLLREIKKFWRVA 470
LIPSL + DV++++ W+ ++D +P SK+RVLTGFLLR+IK FWRV+
Sbjct: 434 LIPSLEAKNDVELDELDWAAYIIDHWKAITLNDPLIPATSKIRVLTGFLLRDIKDFWRVS 493
Query: 471 LLISTLLYPT--HVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIF 518
LL S LL T ++ +D+ +FQL+ R+ ++ E I LG+ SI+
Sbjct: 494 LLTSLLLSATVDVMNEDQDIGQLNFQLEKMRETYLTVEATIHDLGLDSIW 543
>gi|15219925|ref|NP_173680.1| polynucleotide adenylyltransferase-like protein [Arabidopsis
thaliana]
gi|13877577|gb|AAK43866.1|AF370489_1 tRNA adenylyltransferase-like protein [Arabidopsis thaliana]
gi|23198306|gb|AAN15680.1| tRNA adenylyltransferase-like protein [Arabidopsis thaliana]
gi|332192145|gb|AEE30266.1| polynucleotide adenylyltransferase-like protein [Arabidopsis
thaliana]
Length = 605
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 279/469 (59%), Positives = 347/469 (73%), Gaps = 16/469 (3%)
Query: 64 VQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
+++++ IELTD E KIF LL+TLR+ NL+T LRVAGGWVRDKLLGK+ DIDIA+DNM
Sbjct: 78 IELKENIELTDKERKIFDRLLSTLRYCNLDTQLRVAGGWVRDKLLGKESDDIDIAIDNMS 137
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GSEF K EYLS+ E G VI NPDQSKHLETA +++YD WIDFVNLR E+Y+E
Sbjct: 138 GSEFLDKFKEYLSSRDEEV-QGDTVIERNPDQSKHLETAKLRIYDQWIDFVNLRSEEYTE 196
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKAT 243
NSRIPTM+FGTA++DA+RRDLTINSLFYNIN+ +VEDLT RGI DLK GKIVTPLP KAT
Sbjct: 197 NSRIPTMKFGTAKDDAFRRDLTINSLFYNINSGAVEDLTERGIDDLKSGKIVTPLPAKAT 256
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
FLDDPLRVLRA+RFGARF F LDEELK+AA+S+EV+ AL KISRER+G EIDLM+SGN
Sbjct: 257 FLDDPLRVLRAVRFGARFGFTLDEELKEAASSEEVRVALGEKISRERIGNEIDLMISGNG 316
Query: 304 PVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQR 363
PV A+T++ L LF +VF LP EP E C +YL+A W L + F+ +QR
Sbjct: 317 PVSAVTYLSDLKLFSVVFALPSSAEPSPPENCGSLSQSYLEAMWSLLKTPRPGKFSGEQR 376
Query: 364 RLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLI 423
RL+ YAA+FLPFR T YKD KGK IPVVN+ F+ S+KRK SDAETVMNIH+ E+F SLI
Sbjct: 377 RLALYAAMFLPFRKTVYKDTKGKSIPVVNHIFKFSMKRKTSDAETVMNIHQTTERFRSLI 436
Query: 424 PSLVSAEDVKVNDGQWSKELVD-----------VPDASKLRVLTGFLLREIKKFWRVALL 472
PSL +DV++++ W+ ++++ +P SK+RVLTGFLLR+IK FWRV+LL
Sbjct: 437 PSLEVKKDVELDELTWAADILEHWKSITLNDPVIPATSKIRVLTGFLLRDIKDFWRVSLL 496
Query: 473 ISTLLYPT---HVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIF 518
S LL T DH +D+ FQL+ R+ ++ E I +LG+ I+
Sbjct: 497 TSLLLSATVDGSNDH-QDIGQLDFQLERMRETYLTVEATIHELGLDKIW 544
>gi|42571593|ref|NP_973887.1| polynucleotide adenylyltransferase-like protein [Arabidopsis
thaliana]
gi|332192146|gb|AEE30267.1| polynucleotide adenylyltransferase-like protein [Arabidopsis
thaliana]
Length = 603
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 279/469 (59%), Positives = 347/469 (73%), Gaps = 16/469 (3%)
Query: 64 VQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
+++++ IELTD E KIF LL+TLR+ NL+T LRVAGGWVRDKLLGK+ DIDIA+DNM
Sbjct: 78 IELKENIELTDKERKIFDRLLSTLRYCNLDTQLRVAGGWVRDKLLGKESDDIDIAIDNMS 137
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GSEF K EYLS+ E G VI NPDQSKHLETA +++YD WIDFVNLR E+Y+E
Sbjct: 138 GSEFLDKFKEYLSSRDEEV-QGDTVIERNPDQSKHLETAKLRIYDQWIDFVNLRSEEYTE 196
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKAT 243
NSRIPTM+FGTA++DA+RRDLTINSLFYNIN+ +VEDLT RGI DLK GKIVTPLP KAT
Sbjct: 197 NSRIPTMKFGTAKDDAFRRDLTINSLFYNINSGAVEDLTERGIDDLKSGKIVTPLPAKAT 256
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
FLDDPLRVLRA+RFGARF F LDEELK+AA+S+EV+ AL KISRER+G EIDLM+SGN
Sbjct: 257 FLDDPLRVLRAVRFGARFGFTLDEELKEAASSEEVRVALGEKISRERIGNEIDLMISGNG 316
Query: 304 PVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQR 363
PV A+T++ L LF +VF LP EP E C +YL+A W L + F+ +QR
Sbjct: 317 PVSAVTYLSDLKLFSVVFALPSSAEPSPPENCGSLSQSYLEAMWSLLKTPRPGKFSGEQR 376
Query: 364 RLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLI 423
RL+ YAA+FLPFR T YKD KGK IPVVN+ F+ S+KRK SDAETVMNIH+ E+F SLI
Sbjct: 377 RLALYAAMFLPFRKTVYKDTKGKSIPVVNHIFKFSMKRKTSDAETVMNIHQTTERFRSLI 436
Query: 424 PSLVSAEDVKVNDGQWSKELVD-----------VPDASKLRVLTGFLLREIKKFWRVALL 472
PSL +DV++++ W+ ++++ +P SK+RVLTGFLLR+IK FWRV+LL
Sbjct: 437 PSLEVKKDVELDELTWAADILEHWKSITLNDPVIPATSKIRVLTGFLLRDIKDFWRVSLL 496
Query: 473 ISTLLYPT---HVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIF 518
S LL T DH +D+ FQL+ R+ ++ E I +LG+ I+
Sbjct: 497 TSLLLSATVDGSNDH-QDIGQLDFQLERMRETYLTVEATIHELGLDKIW 544
>gi|218186506|gb|EEC68933.1| hypothetical protein OsI_37630 [Oryza sativa Indica Group]
Length = 536
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 267/479 (55%), Positives = 332/479 (69%), Gaps = 15/479 (3%)
Query: 53 MSEQEPPRP-----VVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKL 107
M+ PP P VV+VR+ +ELT+ E +IF LL+ +RHF L T LRVAGGWVRDKL
Sbjct: 1 MAAVSPPTPPQQQRCVVEVREGVELTEKEERIFRRLLDVVRHFGLGTQLRVAGGWVRDKL 60
Query: 108 LGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLY 167
LGKD DIDIALDNM G F KV EY GE G GVI NPDQSKHLETA M ++
Sbjct: 61 LGKDSTDIDIALDNMTGQNFCEKVNEYSELLGEEQ-KGIGVIQCNPDQSKHLETARMLIF 119
Query: 168 DLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIA 227
D+WIDFVNLR E Y+ENSRIPT+ GTA+EDA+RRDLTINSLF+NINT++VEDLTGRGI
Sbjct: 120 DIWIDFVNLRSEKYAENSRIPTVEIGTAKEDAFRRDLTINSLFFNINTNTVEDLTGRGIE 179
Query: 228 DLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKIS 287
DLK G IVTPLP KATFLDDPLRVLRAIRF ARF+F L E+LK AA+ ++VK+ L +KIS
Sbjct: 180 DLKKGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLTEDLKDAASDEKVKSELGSKIS 239
Query: 288 RERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAW 347
+ER+G E+DLM+S PV AM +I L LF++VF P + +P V + C+ C ++++ AW
Sbjct: 240 KERIGHEVDLMMSDKHPVNAMCYIRDLGLFYVVFAFPEKPDPPVPDKCDRLCVSHIEVAW 299
Query: 348 DLTQLIGSSTFN--------DDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSL 399
+L IG S F+ D+ RRL Y+ALF P RNT Y D K KKIPV NY RDSL
Sbjct: 300 NLAHSIGCSVFSGGSDSKSQDEHRRLCFYSALFTPVRNTIYLDKKSKKIPVTNYIIRDSL 359
Query: 400 KRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFL 459
K KASDA+TV+N+H EKF LI L S E++ + E +++P S RVL G +
Sbjct: 360 KLKASDADTVVNVHAASEKFAELINLLESNENLTTVKEKLDDEYLEIPTDSVKRVLAGLI 419
Query: 460 LREIKKFWRVALLISTLLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIF 518
LREIK FWRVAL I TL YP V D L Q +L +++ + AE+ IT+L + +++
Sbjct: 420 LREIKDFWRVALFICTLTYP-EVSSGGDPLGQPDELHQRKEKYTRAERLITELELDAVW 477
>gi|115487576|ref|NP_001066275.1| Os12g0171200 [Oryza sativa Japonica Group]
gi|113648782|dbj|BAF29294.1| Os12g0171200 [Oryza sativa Japonica Group]
Length = 537
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 267/480 (55%), Positives = 331/480 (68%), Gaps = 16/480 (3%)
Query: 53 MSEQEPPRP------VVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDK 106
M+ PP P VV+VR+ +ELT+ E +IF LL+ +RHF L T LRVAGGWVRDK
Sbjct: 1 MAAVSPPTPQQQQQRCVVEVREGVELTEKEERIFRRLLDVVRHFGLGTQLRVAGGWVRDK 60
Query: 107 LLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKL 166
LLGKD DIDIALDNM G F KV EY GE G GVI NPDQSKHLETA M +
Sbjct: 61 LLGKDSTDIDIALDNMTGQNFCEKVNEYSELLGEEQ-KGIGVIQCNPDQSKHLETARMLI 119
Query: 167 YDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGI 226
+D+WIDFVNLR E Y+ENSRIPT+ GTA+EDA+RRDLTINSLF+NINT++VEDLTGRGI
Sbjct: 120 FDIWIDFVNLRSEKYAENSRIPTVEIGTAKEDAFRRDLTINSLFFNINTNTVEDLTGRGI 179
Query: 227 ADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKI 286
DLK G IVTPLP KATFLDDPLRVLRAIRF ARF+F L E+LK AA+ ++VK+ L +KI
Sbjct: 180 EDLKKGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLTEDLKDAASDEKVKSELGSKI 239
Query: 287 SRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAA 346
S+ER+G E+DLM+S PV AM +I L LF++VF P + +P V + C+ C ++++ A
Sbjct: 240 SKERIGHEVDLMMSDKHPVNAMCYIRDLGLFYVVFAFPEKPDPPVPDKCDRLCVSHIEVA 299
Query: 347 WDLTQLIGSSTFN--------DDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDS 398
W+L IG S F+ D+ RRL Y+ALF P RNT Y D K KKIPV NY RDS
Sbjct: 300 WNLAHSIGCSVFSGGSDSKSQDEHRRLCFYSALFTPVRNTIYLDKKSKKIPVTNYIIRDS 359
Query: 399 LKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGF 458
LK KASDA+TV+N+H EKF LI L S E++ + E +++P S RVL G
Sbjct: 360 LKLKASDADTVVNVHAASEKFAELINLLESNENLTTVKEKLDDEYLEIPTDSVKRVLAGL 419
Query: 459 LLREIKKFWRVALLISTLLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIF 518
+LREIK FWRVAL I TL YP V D L Q +L +++ + AE+ IT+L + ++
Sbjct: 420 ILREIKDFWRVALFICTLTYP-EVSSGGDSLGQPDELHQRKEKYTRAERLITELELDGVW 478
>gi|77553768|gb|ABA96564.1| tRNA-nucleotidyltransferase, putative, expressed [Oryza sativa
Japonica Group]
Length = 600
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 267/482 (55%), Positives = 332/482 (68%), Gaps = 16/482 (3%)
Query: 51 ATMSEQEPPRP------VVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVR 104
+ M+ PP P VV+VR+ +ELT+ E +IF LL+ +RHF L T LRVAGGWVR
Sbjct: 62 SGMAAVSPPTPQQQQQRCVVEVREGVELTEKEERIFRRLLDVVRHFGLGTQLRVAGGWVR 121
Query: 105 DKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATM 164
DKLLGKD DIDIALDNM G F KV EY GE G GVI NPDQSKHLETA M
Sbjct: 122 DKLLGKDSTDIDIALDNMTGQNFCEKVNEYSELLGEEQ-KGIGVIQCNPDQSKHLETARM 180
Query: 165 KLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGR 224
++D+WIDFVNLR E Y+ENSRIPT+ GTA+EDA+RRDLTINSLF+NINT++VEDLTGR
Sbjct: 181 LIFDIWIDFVNLRSEKYAENSRIPTVEIGTAKEDAFRRDLTINSLFFNINTNTVEDLTGR 240
Query: 225 GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAA 284
GI DLK G IVTPLP KATFLDDPLRVLRAIRF ARF+F L E+LK AA+ ++VK+ L +
Sbjct: 241 GIEDLKKGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLTEDLKDAASDEKVKSELGS 300
Query: 285 KISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLD 344
KIS+ER+G E+DLM+S PV AM +I L LF++VF P + +P V + C+ C ++++
Sbjct: 301 KISKERIGHEVDLMMSDKHPVNAMCYIRDLGLFYVVFAFPEKPDPPVPDKCDRLCVSHIE 360
Query: 345 AAWDLTQLIGSSTFN--------DDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFR 396
AW+L IG S F+ D+ RRL Y+ALF P RNT Y D K KKIPV NY R
Sbjct: 361 VAWNLAHSIGCSVFSGGSDSKSQDEHRRLCFYSALFTPVRNTIYLDKKSKKIPVTNYIIR 420
Query: 397 DSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLT 456
DSLK KASDA+TV+N+H EKF LI L S E++ + E +++P S RVL
Sbjct: 421 DSLKLKASDADTVVNVHAASEKFAELINLLESNENLTTVKEKLDDEYLEIPTDSVKRVLA 480
Query: 457 GFLLREIKKFWRVALLISTLLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVS 516
G +LREIK FWRVAL I TL YP V D L Q +L +++ + AE+ IT+L +
Sbjct: 481 GLILREIKDFWRVALFICTLTYP-EVSSGGDSLGQPDELHQRKEKYTRAERLITELELDG 539
Query: 517 IF 518
++
Sbjct: 540 VW 541
>gi|3287692|gb|AAC25520.1| Similar to tRNA adenylyltransferase gb|U15930 from Lupinus albus.
EST gb|AA721797 comes from this gene [Arabidopsis
thaliana]
Length = 555
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/469 (57%), Positives = 335/469 (71%), Gaps = 42/469 (8%)
Query: 64 VQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
+++++ IELTD E KIF LL+TLR+ NL+T LRVAGGWVRDKLLGK+ DIDIA+DNM
Sbjct: 78 IELKENIELTDKERKIFDRLLSTLRYCNLDTQLRVAGGWVRDKLLGKESDDIDIAIDNMS 137
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GSEF K EYLS+ E G VI NPDQSKHLETA +++YD WIDFVNLR E+Y+E
Sbjct: 138 GSEFLDKFKEYLSSRDEEV-QGDTVIERNPDQSKHLETAKLRIYDQWIDFVNLRSEEYTE 196
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKAT 243
NSRIPTM+FGTA++DA+RRDLTINSLFYNIN+ +VEDLT RGI DLK GKIVTPLP KAT
Sbjct: 197 NSRIPTMKFGTAKDDAFRRDLTINSLFYNINSGAVEDLTERGIDDLKSGKIVTPLPAKAT 256
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
FLDDPLRVLRA+RFGARF F LDEELK+AA+S+EV+ AL KISRER+G EIDLM+SGN
Sbjct: 257 FLDDPLRVLRAVRFGARFGFTLDEELKEAASSEEVRVALGEKISRERIGNEIDLMISGNG 316
Query: 304 PVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQR 363
PV A+T++ L LF +VF LP EP E C R
Sbjct: 317 PVSAVTYLSDLKLFSVVFALPSSAEPSPPENC--------------------------GR 350
Query: 364 RLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLI 423
RL+ YAA+FLPFR T YKD KGK IPVVN+ F+ S+KRK SDAETVMNIH+ E+F SLI
Sbjct: 351 RLALYAAMFLPFRKTVYKDTKGKSIPVVNHIFKFSMKRKTSDAETVMNIHQTTERFRSLI 410
Query: 424 PSLVSAEDVKVNDGQWSKELVD-----------VPDASKLRVLTGFLLREIKKFWRVALL 472
PSL +DV++++ W+ ++++ +P SK+RVLTGFLLR+IK FWRV+LL
Sbjct: 411 PSLEVKKDVELDELTWAADILEHWKSITLNDPVIPATSKIRVLTGFLLRDIKDFWRVSLL 470
Query: 473 ISTLLYPT---HVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIF 518
S LL T DH +D+ FQL+ R+ ++ E I +LG+ I+
Sbjct: 471 TSLLLSATVDGSNDH-QDIGQLDFQLERMRETYLTVEATIHELGLDKIW 518
>gi|222616709|gb|EEE52841.1| hypothetical protein OsJ_35375 [Oryza sativa Japonica Group]
Length = 554
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 268/497 (53%), Positives = 331/497 (66%), Gaps = 33/497 (6%)
Query: 53 MSEQEPPRP------VVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDK 106
M+ PP P VV+VR+ +ELT+ E +IF LL+ +RHF L T LRVAGGWVRDK
Sbjct: 1 MAAVSPPTPQQQQQRCVVEVREGVELTEKEERIFRRLLDVVRHFGLGTQLRVAGGWVRDK 60
Query: 107 LLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKL 166
LLGKD DIDIALDNM G F KV EY GE G GVI NPDQSKHLETA M +
Sbjct: 61 LLGKDSTDIDIALDNMTGQNFCEKVNEYSELLGEEQ-KGIGVIQCNPDQSKHLETARMLI 119
Query: 167 YDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGI 226
+D+WIDFVNLR E Y+ENSRIPT+ GTA+EDA+RRDLTINSLF+NINT++VEDLTGRGI
Sbjct: 120 FDIWIDFVNLRSEKYAENSRIPTVEIGTAKEDAFRRDLTINSLFFNINTNTVEDLTGRGI 179
Query: 227 ADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD---------- 276
DLK G IVTPLP KATFLDDPLRVLRAIRF ARF+F L E+LK AA+ +
Sbjct: 180 EDLKKGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLTEDLKDAASDEKVKSELGSKI 239
Query: 277 -------EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEP 329
EVK+ L +KIS+ER+G E+DLM+S PV AM +I L LF++VF P + +P
Sbjct: 240 SKERIGHEVKSELGSKISKERIGHEVDLMMSDKHPVNAMCYIRDLGLFYVVFAFPEKPDP 299
Query: 330 EVLEGCEMFCTAYLDAAWDLTQLIGSSTFN--------DDQRRLSQYAALFLPFRNTTYK 381
V + C+ C ++++ AW+L IG S F+ D+ RRL Y+ALF P RNT Y
Sbjct: 300 PVPDKCDRLCVSHIEVAWNLAHSIGCSVFSGGSDSKSQDEHRRLCFYSALFTPVRNTIYL 359
Query: 382 DNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSK 441
D K KKIPV NY RDSLK KASDA+TV+N+H EKF LI L S E++ +
Sbjct: 360 DKKSKKIPVTNYIIRDSLKLKASDADTVVNVHAASEKFAELINLLESNENLTTVKEKLDD 419
Query: 442 ELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLLYPTHVDHTEDMLNQHFQLDSKRDL 501
E +++P S RVL G +LREIK FWRVAL I TL YP V D L Q +L +++
Sbjct: 420 EYLEIPTDSVKRVLAGLILREIKDFWRVALFICTLTYP-EVSSGGDSLGQPDELHQRKEK 478
Query: 502 FVAAEKAITKLGMVSIF 518
+ AE+ IT+L + ++
Sbjct: 479 YTRAERLITELELDGVW 495
>gi|357160663|ref|XP_003578836.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
[Brachypodium distachyon]
Length = 597
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 260/463 (56%), Positives = 331/463 (71%), Gaps = 10/463 (2%)
Query: 64 VQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
V+VR+ +ELT+ E +IF LL+ + HF L T LRVAGGWVRDKLLGKD DIDIALDNM
Sbjct: 70 VEVRESVELTEEEERIFRRLLDVVAHFGLGTQLRVAGGWVRDKLLGKDSADIDIALDNMT 129
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G F KV EY GE G GVI NPDQSKHLETA M +YD+WIDFVNLR E Y+E
Sbjct: 130 GQNFCEKVNEYSELMGEEQ-KGIGVIQCNPDQSKHLETARMLIYDIWIDFVNLRSEKYAE 188
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKAT 243
NSRIPT+ GTA+EDA RRDLTINSLF+NINT SVEDLTGRG+ DLK G IVTPLP K+T
Sbjct: 189 NSRIPTVEIGTAKEDALRRDLTINSLFFNINTKSVEDLTGRGLEDLKKGLIVTPLPAKST 248
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
FLDDPLRVLRAIRF ARF F L EELK+AA+ ++VK+ L KISRERVG E+DLM+S
Sbjct: 249 FLDDPLRVLRAIRFAARFSFTLAEELKEAASDEKVKSELGTKISRERVGHEVDLMMSDKH 308
Query: 304 PVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFN---- 359
PV AM +I L LF++VF P +++P VL+ + C ++++ AW+L + IG S F+
Sbjct: 309 PVNAMCYIRDLGLFYVVFAFPEKLDPPVLDKHDWLCVSHIEVAWNLARSIGRSVFSGGSD 368
Query: 360 ----DDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRV 415
D+Q+RL Y+ALF P RN Y D K KK+PVV+Y R+SLK KASDA+T++NIH
Sbjct: 369 SKSQDEQQRLCLYSALFTPVRNMVYMDKKSKKVPVVSYIIRNSLKLKASDADTIVNIHVA 428
Query: 416 LEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLIST 475
EKF LI S E++++ + E +++P RVL G +LREIK FWRVAL IST
Sbjct: 429 SEKFAELIVLFESNENLEIVKEKLDDEYLEIPTDLVKRVLAGLILREIKDFWRVALFIST 488
Query: 476 LLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIF 518
L++P VD L+Q +L +++ +++ E++IT+LG+ S++
Sbjct: 489 LIHP-EVDKPSGSLSQQDELHLRKEKYISVERSITELGLDSVW 530
>gi|413916278|gb|AFW56210.1| hypothetical protein ZEAMMB73_913903 [Zea mays]
Length = 590
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/478 (55%), Positives = 328/478 (68%), Gaps = 12/478 (2%)
Query: 51 ATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK 110
A S ++ R VVV+ +ELT+TE +IF LL +RHF+L T LRVAGGWVRDKLLGK
Sbjct: 55 AAGSPEQQQRSVVVKE--TVELTETEERIFRRLLEVVRHFSLGTQLRVAGGWVRDKLLGK 112
Query: 111 DCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLW 170
D DIDIALDNM G F KV EY GE G GVI NPDQSKHLETA M + D+W
Sbjct: 113 DSADIDIALDNMTGQNFCEKVNEYSKLIGEQQ-KGIGVIQCNPDQSKHLETARMLILDIW 171
Query: 171 IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLK 230
IDFVNLR E Y+ENSRIPTM GTA+EDAYRRDLTINSLF+NIN +SVEDLTGRGI DLK
Sbjct: 172 IDFVNLRSETYTENSRIPTMEIGTAKEDAYRRDLTINSLFFNINNNSVEDLTGRGIEDLK 231
Query: 231 HGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRER 290
G IVTPLP KATFLDDPLRVLRAIRF ARF+F LDE+LK+AA+ ++VK+ L KISRER
Sbjct: 232 KGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLDEDLKEAASDEKVKSELGTKISRER 291
Query: 291 VGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLT 350
+G EIDLM+S PVKAM I L LF++VF P + P V + C+ C ++++AAWDL
Sbjct: 292 IGHEIDLMMSDKHPVKAMCDIRDLGLFYVVFSFPEKSNPPVFDKCDWQCVSHIEAAWDLA 351
Query: 351 QLIGSSTFN--------DDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRK 402
IGS F+ D++RRL Y+ALF P R+ Y D + KK PV ++ +DSLK K
Sbjct: 352 YSIGSCVFSSGSDSKSQDERRRLYLYSALFNPLRSMFYLDKRSKKAPVSSFIIKDSLKLK 411
Query: 403 ASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLRE 462
SDAETV+NIH EKF LIP L S DV + E +++P S RV G +LRE
Sbjct: 412 TSDAETVVNIHAASEKFAELIPLLESNADVYALKEKLEDEYLEIPGDSVKRVFAGLILRE 471
Query: 463 IKKFWRVALLISTLLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIFFL 520
IK+FWRVALL+S L Y L++ +L +++ ++ AE++IT L + ++ L
Sbjct: 472 IKEFWRVALLLSILFY-RETGTPAGTLDEQDELRRRKEKYIRAERSITDLDLDGVWKL 528
>gi|147827432|emb|CAN68616.1| hypothetical protein VITISV_023390 [Vitis vinifera]
Length = 346
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/316 (69%), Positives = 249/316 (78%), Gaps = 13/316 (4%)
Query: 61 PVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALD 120
P VQVRD I+LT ET+IF LL +RHF+L T LRVAGGWVRDKLLGK+CYDIDIALD
Sbjct: 5 PPSVQVRDSIDLTPKETQIFQKLLQVVRHFSLRTQLRVAGGWVRDKLLGKECYDIDIALD 64
Query: 121 NMMGSEFATKVAEYLSA--TGETAPSGFGVIP-----------SNPDQSKHLETATMKLY 167
+M+G EF K+ +YLS G+ + +I SNPDQSKHLETA M+L+
Sbjct: 65 DMLGREFCEKINDYLSCYRGGKARNRCYSMIILADYAIDSQFFSNPDQSKHLETARMRLF 124
Query: 168 DLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIA 227
D WIDFVNLR EDYSENSRIPTMRFGTA+EDAYRRDLTINSLFYNINTSSVED TGRGI
Sbjct: 125 DEWIDFVNLRSEDYSENSRIPTMRFGTAKEDAYRRDLTINSLFYNINTSSVEDFTGRGIE 184
Query: 228 DLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKIS 287
DLK GKIVTPLPPK TFLDDPLRVLRAIRFGARF FILDEELK AA D+V+AA+A KIS
Sbjct: 185 DLKSGKIVTPLPPKDTFLDDPLRVLRAIRFGARFGFILDEELKLAAGCDDVRAAIADKIS 244
Query: 288 RERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAW 347
RER+G EIDLM+SGN+PVKAMT+IC L LF +VF LP V+P + E C+ C Y+DA W
Sbjct: 245 RERIGHEIDLMISGNEPVKAMTYICDLLLFSVVFSLPPIVKPAISEECDRLCIGYIDAGW 304
Query: 348 DLTQLIGSSTFNDDQR 363
+L QLIGSSTFN + R
Sbjct: 305 NLIQLIGSSTFNKNYR 320
>gi|168003453|ref|XP_001754427.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694529|gb|EDQ80877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 508
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/418 (52%), Positives = 287/418 (68%), Gaps = 6/418 (1%)
Query: 64 VQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
V+ D + LT+ E KIF L+ TL+HF L T LRVAGGWVRDKLLGKD DIDIALDNM+
Sbjct: 1 VEGLDTVRLTELEEKIFDVLIATLKHFGLSTELRVAGGWVRDKLLGKDSADIDIALDNML 60
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G +F KV +YL + GE+ +G GVI SNP+QSKHLETATMK+ +++DFVNLR E Y+
Sbjct: 61 GKDFCEKVNDYLKSIGEST-TGVGVIQSNPEQSKHLETATMKVKGVFVDFVNLRAETYAN 119
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKAT 243
NSRIPTM FGTAE+DA+RRDLTINSLFYNIN SVEDLT +GI DLK G I TPLPPK T
Sbjct: 120 NSRIPTMEFGTAEQDAFRRDLTINSLFYNINKRSVEDLTSQGIKDLKAGIIRTPLPPKET 179
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
FLDDPLRV+RA+RFGARF F LD+ELKKAA+ DEVK+AL K+SRER+G EI LM++G +
Sbjct: 180 FLDDPLRVMRAVRFGARFGFKLDDELKKAASCDEVKSALGHKVSRERIGKEIALMLNGKK 239
Query: 304 PVKAMTHICGLTLFWIVFKLPL-QVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQ 362
P AM + L LF ++F L ++P + E C Y++AA D+ + + ++
Sbjct: 240 PNTAMRCLEQLQLFPVIFTSILCNIKPPLEENTGRLCVDYMEAAGDVFEAFEAELEVGEE 299
Query: 363 RRLSQYAALFLPFRNTTYKDNKGKK--IPVVNYTFRDSLKRKASDAETVMNIHRVLEKFL 420
RRL ++L LP RN T N GKK + + ++SLK K+ DA+ V+ +H E+F+
Sbjct: 300 RRLFYLSSLLLPLRNVT-ASNLGKKGEVSISELIIKESLKLKSDDAKKVLQLHSAAEQFV 358
Query: 421 SLIPSLVSAEDVKVNDGQWSKELVDVPDASKLR-VLTGFLLREIKKFWRVALLISTLL 477
L L+ + ++G S++ V L L G LL EIK WR+AL++S++L
Sbjct: 359 ELTEMLLVDAPERTDEGFQSEKRVRAGLRFTLNYALAGLLLGEIKGMWRLALVLSSVL 416
>gi|302790141|ref|XP_002976838.1| hypothetical protein SELMODRAFT_151539 [Selaginella moellendorffii]
gi|300155316|gb|EFJ21948.1| hypothetical protein SELMODRAFT_151539 [Selaginella moellendorffii]
Length = 562
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 225/468 (48%), Positives = 299/468 (63%), Gaps = 31/468 (6%)
Query: 64 VQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
V++RD ++L+ E KIF LL RHF L T LRVAGGWVRDKLLGKDCYDIDIALDNM+
Sbjct: 47 VEIRDTVKLSAEEEKIFDRLLAVERHFGLGTQLRVAGGWVRDKLLGKDCYDIDIALDNML 106
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G +F KV EYL + GE S GVI SNPDQSKHLETA MK+ D+W+DFVNLR E Y++
Sbjct: 107 GRDFCEKVNEYLKSIGEETKS-VGVILSNPDQSKHLETARMKIEDVWVDFVNLRAETYAD 165
Query: 184 NSRIP-TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRG--IADLKHGKIVTPLPP 240
+SRIP TM FGT ++DA RRDLTINSLFYNINT VED T RG + DLK G I TPL P
Sbjct: 166 DSRIPSTMEFGTPKQDAERRDLTINSLFYNINTGHVEDHTDRGKCLRDLKVGVIATPLEP 225
Query: 241 KATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVS 300
TFLDDPLRVLR++RF +RF F L+++L+ AA++ EV+ AL KISRER+G E++LM+
Sbjct: 226 HVTFLDDPLRVLRSVRFASRFGFELEDDLRAAASTGEVRDALERKISRERIGHEVELMLL 285
Query: 301 GNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFND 360
GN P +AM + L LF VF P P +++G E C ++ AAWD+ QL+ +
Sbjct: 286 GNDPTQAMELLLDLKLFRSVFTPP---APLLVDGWERLCVQHIHAAWDVLQLV-NVKLTA 341
Query: 361 DQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFL 420
+ + AAL P +++TY+ K KK P ++ R+SLK K +DA+ V+++HR KF
Sbjct: 342 EHKLKFLLAALLFPLQDSTYEGKKRKKFPSTSFIIRESLKLKNADADGVVDLHRSARKFD 401
Query: 421 SLIPSLVS--AEDVKVNDGQWSKELVDVPDA-----------SKLRVLTGFLLREIKKFW 467
L L+S AE + + ++E V +A ++ R+ G L EIK+ W
Sbjct: 402 RLEDVLLSDAAEVITAHAAANTREEVQRLEAGDAFAWVCSSCAEDRIFVGLELMEIKELW 461
Query: 468 RVALLISTLLYPTHVDHTEDML-NQHFQLDSKRDLFVAAEKAITKLGM 514
R AL++S+L D+L NQ + K + + I+K G+
Sbjct: 462 RAALVLSSL---------NDLLENQAWDAQEKAKVCTSVMDFISKQGL 500
>gi|302797611|ref|XP_002980566.1| hypothetical protein SELMODRAFT_113085 [Selaginella moellendorffii]
gi|300151572|gb|EFJ18217.1| hypothetical protein SELMODRAFT_113085 [Selaginella moellendorffii]
Length = 587
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/489 (45%), Positives = 299/489 (61%), Gaps = 51/489 (10%)
Query: 64 VQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
V++RD ++L+ E KIF LL RHF L T LRVAGGWVRDKLLGKDCYDIDIALDNM+
Sbjct: 50 VEIRDTVKLSAEEEKIFDRLLAVERHFGLGTQLRVAGGWVRDKLLGKDCYDIDIALDNML 109
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G +F KV EYL + GE + GVI SNPDQSKHLETA MK+ D+W+DFVNLR E Y++
Sbjct: 110 GRDFCEKVNEYLKSIGEETKN-VGVILSNPDQSKHLETARMKIEDVWVDFVNLRAETYAD 168
Query: 184 NSRIP-TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRG--IADLKHGKIVTPLPP 240
+SRIP TM FGT ++DA RRDLTINSLFYNINT VED T RG + DLK G I TPL P
Sbjct: 169 DSRIPSTMEFGTPKQDAERRDLTINSLFYNINTGHVEDHTDRGKCLRDLKVGVIATPLEP 228
Query: 241 KATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVS 300
TFLDDPLRVLR++RF +RF F L+++L+ AA++ EV+ AL KISRER+G E++LM+
Sbjct: 229 HVTFLDDPLRVLRSVRFASRFGFELEDDLRAAASTGEVRDALERKISRERIGHEVELMLL 288
Query: 301 GNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSS---- 356
GN P +AM + L LF VF P P +++G E C ++ AAWD+ QL+ +
Sbjct: 289 GNDPTQAMELLLDLKLFRSVFTPP---APLLVDGWERLCVQHIHAAWDVLQLVNVNLTVS 345
Query: 357 -------TFNDDQRRLSQYAALFLPFRNTTYKDNKGKK----------IPVVNYTFRDSL 399
+ + + AAL P +++TY+ K KK P ++ R+SL
Sbjct: 346 SINFKQLNWQAEHKLKFLLAALLFPLQDSTYEGKKRKKASSYAQITLQFPSTSFIIRESL 405
Query: 400 KRKASDAETVMNIHRVLEKFLSLIPSLVS--AEDVKVNDGQWSKELVDVPDA-------- 449
K K +DA+ V+++HR KF L L+S AE + + ++E V +A
Sbjct: 406 KLKNADADGVVDLHRSARKFDRLEDVLLSDAAEAITTHAAADTREEVQRLEAGDAFAWVC 465
Query: 450 ---SKLRVLTGFLLREIKKFWRVALLISTLLYPTHVDHTEDML-NQHFQLDSKRDLFVAA 505
++ R+ G L EIK WR AL++S+L D+L NQ + K + +
Sbjct: 466 SSCAEDRIFVGLELMEIKDLWRAALVLSSL---------NDLLENQAWDAQEKAKVCTSV 516
Query: 506 EKAITKLGM 514
I+K G+
Sbjct: 517 MDFISKQGL 525
>gi|145344288|ref|XP_001416668.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576894|gb|ABO94961.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 525
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/414 (44%), Positives = 261/414 (63%), Gaps = 33/414 (7%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
++ T E ++F LL + HF L+ LRVAGGWVRDKL+G++ DID+ALD M+G EFA
Sbjct: 23 EVRCTAKEREVFDTLLAVVEHFKLDVTLRVAGGWVRDKLVGRESDDIDVALDTMLGKEFA 82
Query: 129 TKVAEYLSATG-ETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRI 187
KV YL A G ET G GVI SNP+QSKHLETATM++ D+W+D VNLR E+YSE+SRI
Sbjct: 83 EKVNAYLEAQGMET--KGIGVIQSNPEQSKHLETATMRVRDVWLDLVNLRSENYSEDSRI 140
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDD 247
P M+FGTA++DA+RRDLTIN+LFYNIN VED T RGI DL G + TPLPP+ TFLDD
Sbjct: 141 PEMQFGTAKDDAFRRDLTINALFYNINEKKVEDFTERGIEDLSRGVVRTPLPPRTTFLDD 200
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
PLR+LRA+RF ARF F +DEE+ +A+ +V+ AL K+SRER G E+ M+ G P A
Sbjct: 201 PLRILRAVRFAARFGFDVDEEIGASASDPDVQHALKHKVSRERFGKEVLGMLKGRSPADA 260
Query: 308 MTHICGLTLFWIVFKLPLQ-VEPEVLEGCE---MFCTAYLDAAWDLTQLIGSSTFNDDQR 363
+ + + IV ++P Q V V + + + T ++ A L ++ + + D+++
Sbjct: 261 VALMAAFKISPIVLQVPTQSVVDAVTDAADRLSQYSTRCVEGA--LEEIASTDAWMDEEK 318
Query: 364 RLSQY-AALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSL 422
R+ Y A+ LP+R KGKK+P V ++LK ++ DAET +++H + ++L
Sbjct: 319 RVWLYLASWLLPYRELQSDGKKGKKVPAVGDIISNALKLRSKDAETTVHVH----ESMAL 374
Query: 423 IPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTL 476
+L++ +D R+ G LR++ + WR+A+L+ L
Sbjct: 375 AKTLLTNKDF-------------------TRLEGGLALRKMGETWRLAVLLEAL 409
>gi|255075261|ref|XP_002501305.1| predicted protein [Micromonas sp. RCC299]
gi|226516569|gb|ACO62563.1| predicted protein [Micromonas sp. RCC299]
Length = 712
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 213/505 (42%), Positives = 289/505 (57%), Gaps = 57/505 (11%)
Query: 5 LASTIKQNPLLLTISSFLYRPPTKTVSFRNIFTVNTTRNL-----GFLRCK-ATMSEQE- 57
LA + + NP+ +SS + PP++ S + + + G +R + +SE+E
Sbjct: 73 LARSSRNNPVSRAVSS-VASPPSQDASVSDAEAKASGAEISRGGDGPVRPEFCDISEEED 131
Query: 58 --PPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDI 115
R VV++ + T E KIF LL+ ++ + L LRVAGGWVRDKLLGK DI
Sbjct: 132 VQKRRIVVMEPGATVVCTAEEEKIFGTLLDVVKRYELPVTLRVAGGWVRDKLLGKHSSDI 191
Query: 116 DIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVN 175
DIALD MMG EFA KV EYL GE G GVI SNPDQSKHLETATM+++ W+D VN
Sbjct: 192 DIALDTMMGEEFAAKVNEYLQEKGEET-HGVGVIQSNPDQSKHLETATMRVHGQWLDLVN 250
Query: 176 LRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIV 235
LR E+Y+E SRIP M+FG+A +DAYRRDLTINSLFYNIN VED TG G+ DL+ G +
Sbjct: 251 LRSEEYTEASRIPEMKFGSATDDAYRRDLTINSLFYNINLRCVEDFTGMGLKDLQDGVVR 310
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
TPLPP+ TFLDDPLR+LR++RF +RF F LD+ + AA EV+ L +K+SRERVG E+
Sbjct: 311 TPLPPRTTFLDDPLRILRSVRFASRFGFSLDDAIVHAATDAEVQEKLLSKVSRERVGKEV 370
Query: 296 DLMVSGNQPVKAMTHICGLTLFWIVFK------LPLQVEPEVLEGC--EMFCTAYLDAAW 347
M+ G P A++ +C LF VF L ++ P V GC M C LDA
Sbjct: 371 QGMLRGPSPGDALSLLCRFNLFDTVFATSFPETLTSRLPPTVAWGCLHSMRC---LDAVL 427
Query: 348 -DLTQLIGSSTF-----NDDQRRLSQYAALFLPFRNTTYK------DNKGKKIPVVNYTF 395
L G ++F ++R AA P ++ K K IPVV+
Sbjct: 428 SSLANSRGDASFFTKELTCEEREWLVLAAFLAPLEGGEFQALGHPAGKKTKFIPVVHTVV 487
Query: 396 RDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWS---KELVDVPDASKL 452
+++LK + DAE V SL+ L + D +WS ++ ++P ++L
Sbjct: 488 KEALKWRVKDAEAV-----------SLVLELAA-------DMRWSLIGRDGAELPKFTRL 529
Query: 453 RVLTGFLLREIKKFWRVALLISTLL 477
R G LLR K++WR+AL++ +L
Sbjct: 530 RA--GKLLRRGKEYWRLALIMGAVL 552
>gi|326493460|dbj|BAJ85191.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 359
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 178/292 (60%), Positives = 212/292 (72%), Gaps = 10/292 (3%)
Query: 64 VQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
V+VR+ +ELT+ E +IF+ LL+ +RHF L T LRVAGGWVRDKLLGKD DIDIALDNM
Sbjct: 67 VEVRESVELTEEEERIFARLLDVVRHFGLGTQLRVAGGWVRDKLLGKDSADIDIALDNMT 126
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G F +V EY GE G GVI NPDQSKHLETA M +YD+WIDFVNLR E Y+E
Sbjct: 127 GQNFCERVNEYSKFMGEEQ-KGIGVIQCNPDQSKHLETARMLIYDIWIDFVNLRSEKYAE 185
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKAT 243
NSRIPT+ GTA+EDA RRDLTINSLF+NINT VEDLTGRG+ DLK G I TPLP K+T
Sbjct: 186 NSRIPTVEIGTAKEDALRRDLTINSLFFNINTKLVEDLTGRGLEDLKKGLIDTPLPAKST 245
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
FLDDPLRVLRAIRF ARF F L +LK+AA+ ++VK+ L +KISRER+G E+DLM+S
Sbjct: 246 FLDDPLRVLRAIRFAARFSFTLAVDLKEAASDEKVKSELGSKISRERIGHEVDLMMSDKH 305
Query: 304 PVKAMTHICGLTLFWIVFKLPLQVEPEVLEG---------CEMFCTAYLDAA 346
PV AM +I L LF++VF P ++EP V + C C Y+ A
Sbjct: 306 PVNAMRYIRDLGLFYVVFAFPEKLEPPVFDKHDWYVSILICYCVCLDYMQYA 357
>gi|308801765|ref|XP_003078196.1| tRNA-nucleotidyltransferase, putative / tRNA adenylyltransferase,
putati (ISS) [Ostreococcus tauri]
gi|116056647|emb|CAL52936.1| tRNA-nucleotidyltransferase, putative / tRNA adenylyltransferase,
putati (ISS) [Ostreococcus tauri]
Length = 538
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 181/413 (43%), Positives = 260/413 (62%), Gaps = 31/413 (7%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
++ T ET++F LL + HF L+ LRVAGGWVRDKL+G++ DID+ALD M+G EFA
Sbjct: 39 EVRCTAKETEVFETLLAVVEHFKLDVTLRVAGGWVRDKLVGRESDDIDVALDTMLGKEFA 98
Query: 129 TKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
KV EYL A G G GVI SNP+QSKHLETATM++ D+W+D VNLR E+YSE+SRIP
Sbjct: 99 EKVNEYLEANG-METKGIGVIQSNPEQSKHLETATMRVRDVWLDLVNLRSENYSEDSRIP 157
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
M FGTA++DA+RRDLTINSLFYN+N VED T RGI DL+ G + TPLPP+ TFLDDP
Sbjct: 158 DMEFGTAKDDAFRRDLTINSLFYNLNEKKVEDFTERGIQDLRDGIVRTPLPPRTTFLDDP 217
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LR+LRA+RF ARF F +DEE+ +A+ +V+ AL K+SRER G E+ M+ G P A+
Sbjct: 218 LRILRAVRFAARFGFDVDEEIGASASDPDVQNALKHKVSRERFGKEVVGMLKGRSPADAV 277
Query: 309 THICGLTLFWIVFKLPLQ----VEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRR 364
+ + IVF++P Q E + ++ T ++ A + ++ ++ D++ +
Sbjct: 278 ALMVAFKITPIVFQVPTQSVVDAVTETADRLSLYSTRCIERA--IKEVASIESWLDEEHK 335
Query: 365 LSQY-AALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLI 423
+ + A+ LP+R KGKK+P V+ ++LK ++ DA+T ++IH L FL
Sbjct: 336 IWLFLASWLLPYRALESIGAKGKKVPAVSDIVSNALKLRSKDADTAVHIHESL--FL--- 390
Query: 424 PSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTL 476
+K L++ + ++L G LR++ WR+ +L+ +L
Sbjct: 391 ----------------AKALLENKEFTRLE--GGMALRKMGFTWRLPVLLESL 425
>gi|303286187|ref|XP_003062383.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455900|gb|EEH53202.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 729
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 184/430 (42%), Positives = 252/430 (58%), Gaps = 26/430 (6%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
+ T E +IF+ LL + +L LRVAGGWVRDKLLGK+ DIDIA+D+++G EFA
Sbjct: 143 VTCTAEEERIFATLLEVVEKNDLPVTLRVAGGWVRDKLLGKNSTDIDIAIDSLLGREFAE 202
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
V +L GET G GVI SNPDQSKHLETATM+++D+W+D VNLR E+YSE SRIP
Sbjct: 203 LVNAHLREKGETV-HGVGVIQSNPDQSKHLETATMRVHDVWLDLVNLRSENYSEESRIPE 261
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
M FG+A +DA+RRDLTIN+LFYNIN VED TG G+ DL+ G + TPLPPK TFLDDPL
Sbjct: 262 MTFGSATDDAFRRDLTINALFYNINLKQVEDFTGMGLKDLQDGVVRTPLPPKTTFLDDPL 321
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
R+LRA+RF +RF F+LD+E+ AA +V+ AL K+SRERVG E+ M+ G P AMT
Sbjct: 322 RILRAVRFASRFGFVLDDEIVSAAGDADVQCALRTKVSRERVGKEVSGMLRGPSPGDAMT 381
Query: 310 HICGL-------TLFWIVFKLPLQVEPEVLEGCEMFCTAY--------LDAAWDLTQLIG 354
+C LF +VF + E L T++ LDA G
Sbjct: 382 LLCRFRRVLLPHCLFEVVFTPASLINLEALSALPPNTTSWACLHSLRSLDALLSAHANAG 441
Query: 355 ----SSTFNDDQRRLSQYAALFLPFRNTTY--KDNKGKKIPVVNYTFRDSLKRKASDAET 408
S +F+ ++R AA P R + K K P+V +++LK + DA+
Sbjct: 442 GKPWSKSFSCEEREWLVLAAFLAPLRTLCVPPQGKKQKPTPLVEVCVKEALKMRGKDADA 501
Query: 409 VMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLT-GFLLREIKKFW 467
V I L+ + + ++ + D V ++ + + +R T G +R K+ W
Sbjct: 502 VSLI---LDAAVDMRAGVLGSYDDSVAASIAAERMKEAGRVETVRRQTAGRAIRRGKEQW 558
Query: 468 RVALLISTLL 477
R+AL+I ++
Sbjct: 559 RLALVIGAVM 568
>gi|281202997|gb|EFA77198.1| tRNA nucleotidyltransferase [Polysphondylium pallidum PN500]
Length = 595
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 186/413 (45%), Positives = 247/413 (59%), Gaps = 31/413 (7%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
+ +T E ++F LL + TVLRVAGGWVRDKL G DIDIALDNMMG FA+
Sbjct: 83 LNITKVEQQLFQTLLQVVEQTKCGTVLRVAGGWVRDKLRGDHSSDIDIALDNMMGEAFAS 142
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
V +YL + GVI SNP QSKHLETAT+++YD+WIDFVNLR E YS++SRIP
Sbjct: 143 LVNQYLKDHKQET-HRIGVIQSNPAQSKHLETATVRIYDMWIDFVNLRSETYSDHSRIPE 201
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
+ GT E+DAYRRDLTINSLFYNIN + +ED TG G+ DLK G + TPLPP+ TFLDDPL
Sbjct: 202 ITIGTPEQDAYRRDLTINSLFYNINENKIEDFTGNGVDDLKCGIVRTPLPPQTTFLDDPL 261
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
RVLR+IRF R + +D +L +AA+S VK ALA+K+S ERVG E+D M+SG +P A+
Sbjct: 262 RVLRSIRFATRLYYAIDHKLVEAASSSTVKDALASKVSHERVGIELDGMLSGPRPDLAIH 321
Query: 310 HICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLI--GSSTFNDDQRRLSQ 367
I LF +F LP V + E + A + ++ + I GS+T R++
Sbjct: 322 LINHFGLFDHIFSLPEGV--TIKEKNYQYIAA--ENILNMMRFISWGSTTEELPTRKIRL 377
Query: 368 YAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLV 427
++L F N T+ K + IP + YT + LK D + V+N+ ++F
Sbjct: 378 LSSLLQVFHNYTFTTKKNRTIPAIQYTIVEFLKFSNKDYDDVLNVLECADRF-------- 429
Query: 428 SAEDVKVND-GQWSKELVDVPDASKLRVLTGFLLREIKKFWRVAL---LISTL 476
E K+ND G +S++ V G ++ + WRVAL LIS L
Sbjct: 430 KPEVQKLNDNGSFSRKDV------------GLIVYKAGPLWRVALANALISEL 470
>gi|440791569|gb|ELR12807.1| tRNA nucleotidyltransferase [Acanthamoeba castellanii str. Neff]
Length = 554
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 190/463 (41%), Positives = 262/463 (56%), Gaps = 40/463 (8%)
Query: 42 RNLGFLRCKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGG 101
RNL LR ++ + P V +EL+D E ++F+ LL F L++ LRVAGG
Sbjct: 30 RNLALLRPASSAAT---PEGVSYDASQAVELSDKEREVFTFLLAVNESFGLKSTLRVAGG 86
Query: 102 WVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG-ETAPSGFGVIPSNPDQSKHLE 160
WVRDKL G+ YDIDIALDNMMG FA +V EYL+ G ET GVI SNP+QSKHLE
Sbjct: 87 WVRDKLRGEPSYDIDIALDNMMGKVFAERVNEYLAMKGYET--HNIGVIQSNPEQSKHLE 144
Query: 161 TATMKLYDLWIDFVNLRCEDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVE 219
TATM+++D+W+DFVNLR E YSE+SRIP+ M GT +DAYRRDLTINSLFYNIN ++VE
Sbjct: 145 TATMRVFDVWLDFVNLREESYSEHSRIPSEMTIGTPTDDAYRRDLTINSLFYNINENTVE 204
Query: 220 DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVK 279
D T G+ DL G I TPLP + TF+DDPLR+LRAIRF +R +F L ++ AAA V+
Sbjct: 205 DWTKSGLTDLADGIIRTPLPAETTFMDDPLRILRAIRFASRLEFALHADIIAAAAQPRVR 264
Query: 280 AALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFC 339
AL +KISRER+G E++ M+SG P A +I L L+ +V+ LP + +
Sbjct: 265 VALGSKISRERIGKEVEGMLSGPHPELAFYYIHHLGLYDVVWALPPPPKGATEPTDHVLV 324
Query: 340 TAYLDAAWD----LTQLIGSST--FNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNY 393
Y + A + + +L+ +D R + A L + K + PV +Y
Sbjct: 325 PDYRERAVNNVRQMKRLLCHECPIMHDKVARRRLFLAASLKVYSGVLYMEKKRAFPVTHY 384
Query: 394 TFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLR 453
++SL+ K D + V+ +H +E+F LI VD DA
Sbjct: 385 IIKESLRWKVKDMDEVLLLHNGIEEFHILINKTYGCA-------------VDRKDA---- 427
Query: 454 VLTGFLLREIKKFWRVALLISTL-------LYPTHVDHTEDML 489
G L+R + W+ L ++ + PT D ++++L
Sbjct: 428 ---GLLMRRLGALWKECLYLAVINDLPPFTTTPTARDQSDNIL 467
>gi|449017335|dbj|BAM80737.1| tRNA nucleotidyltransferase [Cyanidioschyzon merolae strain 10D]
Length = 752
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 181/448 (40%), Positives = 248/448 (55%), Gaps = 58/448 (12%)
Query: 47 LRCKATMSEQEPP------------RPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLET 94
LRC A Q P RP++VQ IEL+ E +IFS LL + L
Sbjct: 217 LRCLAAFENQTRPMQRVSGTERNLNRPLLVQ----IELSSIEQQIFSLLLEVNTSYRLGC 272
Query: 95 VLRVAGGWVRDKLLG--KDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSN 152
LRVAGGWVRDKLLG D D+DIALDNM+G EFA +V +L+ G+ S VI N
Sbjct: 273 TLRVAGGWVRDKLLGICADQIDLDIALDNMLGREFAERVDAFLAERGQKQGS-VHVIRVN 331
Query: 153 PDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYN 212
P QSKHLETA M+L+D WIDFVNLR E Y+ +SRIP+M GT EEDA+RRDLTIN+LFYN
Sbjct: 332 PAQSKHLETARMRLFDHWIDFVNLRKESYAADSRIPSMAIGTPEEDAFRRDLTINTLFYN 391
Query: 213 INTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
INT VED T G+ DL G I TPLPP TFL+DPLR LRA+RF +RF F + E+ +A
Sbjct: 392 INTKQVEDWTRMGLTDLAAGLIRTPLPPLTTFLEDPLRALRAVRFASRFGFTVVPEVLEA 451
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEV- 331
A+S V+ AL +K+SRER+ TE++LM+ G QPV A++ + + L +F LP + PE
Sbjct: 452 ASSPRVREALLSKVSRERIATELELMLGGPQPVMALSLLFDMGLAKCLFPLPPSI-PESA 510
Query: 332 ------------LEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTT 379
++ E F + +L +L Q D R++ A P + +
Sbjct: 511 YPDRWTELALTRVQRLERFGSVWLKEGIELWQ-------QDGTRQMLLLGACLSPLFDIS 563
Query: 380 YKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQW 439
Y + ++ VV Y D+L+ + + ++++ K +L+ + W
Sbjct: 564 YVIKRDQRCSVVFYILHDALRVQQQKKKAILSMLSACSKIRTLV----------LQPLAW 613
Query: 440 SKELVDVPDASKLRVLTGFLLREIKKFW 467
++ RV G L+R + +W
Sbjct: 614 NER--------SCRVEVGLLIRSLGSWW 633
>gi|328875376|gb|EGG23741.1| tRNA nucleotidyltransferase [Dictyostelium fasciculatum]
Length = 607
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 180/455 (39%), Positives = 254/455 (55%), Gaps = 45/455 (9%)
Query: 62 VVVQVRDK-------IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYD 114
VVV + DK IE+T E K+F LL+ + N T LRVAGGWVRDKL G + +D
Sbjct: 82 VVVAIGDKDSTDTATIEITKVEQKLFQILLDVAKVNNCNTTLRVAGGWVRDKLRGDNSHD 141
Query: 115 IDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFV 174
IDIALDNMMG FA V +YL + GVI SNPDQSKHLETAT+K++D W+D V
Sbjct: 142 IDIALDNMMGEAFAALVNKYLEDHHQET-HRIGVIQSNPDQSKHLETATVKIFDSWVDLV 200
Query: 175 NLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKI 234
NLR E YS NSRIP ++ GT E+DA+RRDLTINSLFYN+N + +ED TG GI DLK G +
Sbjct: 201 NLRSETYSSNSRIPEIKIGTPEQDAFRRDLTINSLFYNVNENRIEDFTGNGIVDLKCGIV 260
Query: 235 VTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTE 294
TPLPP TFLDDPLRVLR+IRF R + +D +L +AA++ VK AL +K+S ER+G E
Sbjct: 261 RTPLPPLTTFLDDPLRVLRSIRFATRLYYAIDHKLVEAASNPTVKEALKSKVSHERIGIE 320
Query: 295 IDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLI- 353
+D M++G +P A+ I LF V +P +E ++ E + L+ ++ + I
Sbjct: 321 LDGMLNGPRPDLAIQLIYEFGLFDHVINIPDSIE---IQDKEYKYKSILNVL-NMMRFIN 376
Query: 354 -GSSTFNDDQRRLSQYAALFLPFRNTTYKD--NKGKKIPVVNYTFRDSLKRKASDAETVM 410
G+ R+ A+L T+K+ K K P++ + D LK + + +
Sbjct: 377 WGTQAEEASTRKTRLLASLCANIYGYTFKNPLKKNKDTPILQHVLVDYLKVSNKECDEIT 436
Query: 411 NIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVA 470
N+ + F L+ + + +S++ V G ++ + FW+ +
Sbjct: 437 NVLECAKLFRPLVNQFYT-------NHVFSRKSV------------GLVIYKAGPFWKSS 477
Query: 471 LLIS----------TLLYPTHVDHTEDMLNQHFQL 495
L I+ L+YP H + + + F L
Sbjct: 478 LAIALISELPEFQHNLVYPLHKEEINNSPSHDFYL 512
>gi|330812875|ref|XP_003291342.1| hypothetical protein DICPUDRAFT_38806 [Dictyostelium purpureum]
gi|325078484|gb|EGC32133.1| hypothetical protein DICPUDRAFT_38806 [Dictyostelium purpureum]
Length = 556
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 182/447 (40%), Positives = 252/447 (56%), Gaps = 45/447 (10%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
+I LT +E +F L++ +R+ N T LRVAGGWVRDKL G D DIDI LDNMMG FA
Sbjct: 67 EIHLTKSEVLLFQELMHVVRNSNCGTTLRVAGGWVRDKLRGDDSNDIDITLDNMMGESFA 126
Query: 129 TKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
V ++LS + GVI SNP+QSKHLETAT+K++DLWIDFVNLR E Y++NSRIP
Sbjct: 127 ELVNKHLSGK-QHQTHRIGVIQSNPEQSKHLETATVKIFDLWIDFVNLRSETYTDNSRIP 185
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
++ GT ED+ RRDLTINSLFYNIN + +ED TG+ I DL G I TPLPP TFLDDP
Sbjct: 186 EIKIGTPLEDSLRRDLTINSLFYNINENKIEDFTGKAITDLNLGIIRTPLPPLTTFLDDP 245
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LRV R+IRF +R F +D+EL +AA++ VK A+ +KIS ER+ E D M+ G +P A+
Sbjct: 246 LRVFRSIRFASRLYFKIDQELVEAASNAVVKEAIKSKISHERIAKEFDGMLGGKRPDLAI 305
Query: 309 THICGLTLFWIVFKLP------LQVEPEVLEGCEMFCTAYLD-AAWDLTQLIGSSTFNDD 361
+ I ++ +F LP +V E E +C+ + W GS
Sbjct: 306 SLIYRFGIYDCLFSLPTSGLDHTKVHTEYREQSIYYCSQAMRLIEW------GSQDEELS 359
Query: 362 QRRLSQYAALFLPFRNTTY--KDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKF 419
+R +AL +PF TY + K K+ V++Y + LK D + I VL+
Sbjct: 360 TKRQRLLSALCIPFYGITYLNANKKNKETSVIHYMIIEYLKLSNKDNDE---ISLVLDTA 416
Query: 420 LSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLL-- 477
+ P ++ ++ + P +S R G ++ + WR AL I+ +L
Sbjct: 417 YQIRPHVLKYKE-------------EGP-SSFSRKNVGLIIHKCGVLWRAALAIALILDL 462
Query: 478 ---------YPTHVDHTEDMLNQHFQL 495
+PT D + ++N H+ L
Sbjct: 463 PKYNFNHFNFPTLCDESNLIIN-HYNL 488
>gi|145489038|ref|XP_001430522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397620|emb|CAK63124.1| unnamed protein product [Paramecium tetraurelia]
Length = 507
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 174/448 (38%), Positives = 252/448 (56%), Gaps = 49/448 (10%)
Query: 65 QVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMG 124
QV +I +T+ E +IF+ ++ N ++VLRVAGGWVRDKL+G + +DIDI +DNM G
Sbjct: 20 QVVKRIHITEKENQIFNTIMQFRNDTNTQSVLRVAGGWVRDKLMGNESHDIDITIDNMSG 79
Query: 125 SEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSEN 184
+F K+ +Y + SGFGV NP+QSKHLETA +K+ D IDFVNLR E Y++N
Sbjct: 80 EQFVLKMKDYFESKN-IKVSGFGVTKLNPEQSKHLETACIKILDQSIDFVNLRGETYTQN 138
Query: 185 SRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATF 244
SR P + GT E+DA+RRDLTINS+FYN+NT +EDLT G+ DL++G I TPL P TF
Sbjct: 139 SRTPQIVVGTPEQDAFRRDLTINSMFYNLNTQEIEDLTKMGLQDLENGIIRTPLDPYITF 198
Query: 245 LDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
DDPLR+LR RF RF+F + EE+ K ++K AL K+SRER+ E+D M+ +
Sbjct: 199 KDDPLRILRTFRFATRFNFQIVEEIIKVIELQDIKEALQNKVSRERISIEMDWMLKSEKC 258
Query: 305 VKAMTHICGLTLFWIVFKLPLQ--------VEPEVLEGCEMFCTAYLDAAWDLT------ 350
++ + + L L+ I+F+LP Q VE + E F YL DL
Sbjct: 259 LQGLKNYHELGLWCIIFELPKQNQNQCNVKVEDQGKYHLESF--KYLKTLQDLKYFPKFP 316
Query: 351 QLIGSSTFNDDQRRLSQY---AALFLPFRNTTYKDNKGKKI-PVVNYTFRDSLKRKASDA 406
Q+ G + Q++L+ Y + + LP++ TYK KGK I + Y +SLK
Sbjct: 317 QIHGFES----QQQLNLYLNLSCICLPYQKITYK--KGKNIESTIIYILAESLKMTRKST 370
Query: 407 ETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKF 466
+ + N R++E+F L +EL++ + R++T L++ K+
Sbjct: 371 DEIYNACRLVEQFNQLK----------------KEELIN----NYRRIVT--FLQDAKQQ 408
Query: 467 WRVALLISTLLYPTHVDHTEDMLNQHFQ 494
W + L I L + LN+ FQ
Sbjct: 409 WELILYIDYLQEYINDPQATPQLNEKFQ 436
>gi|392571873|gb|EIW65045.1| hypothetical protein TRAVEDRAFT_109774 [Trametes versicolor
FP-101664 SS1]
Length = 552
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 184/447 (41%), Positives = 244/447 (54%), Gaps = 62/447 (13%)
Query: 69 KIELTDTETKIFSCLLNTLRHF----NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMG 124
+I+LTD E ++ + L RH +ET R+AGGWVRDKL+G C DIDIAL+NMMG
Sbjct: 3 EIKLTDEENELCTLLDQCTRHMKETEGIETSCRIAGGWVRDKLVGSQCNDIDIALENMMG 62
Query: 125 SEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSEN 184
FA + EY + A I SNPDQSKHLETA + + +DFVNLR E+Y+EN
Sbjct: 63 VPFAERFVEYCRTVKDLAVKSVAKIESNPDQSKHLETARTTIMGIELDFVNLRSEEYAEN 122
Query: 185 SRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKAT 243
SRIPT + FGT +DA RRD+TINSLFYN+++ VED TG+G+ DL++G + TPLPP+ T
Sbjct: 123 SRIPTQVTFGTPLQDAIRRDITINSLFYNVHSREVEDHTGKGLDDLRNGIVRTPLPPRET 182
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
F DDPLRVLR IRF +RF F + EL++AA ++ AL KISRERVG E+D M+ G
Sbjct: 183 FADDPLRVLRCIRFASRFGFTMVPELQEAAKDPTIQEALRMKISRERVGEELDKMMGGRN 242
Query: 304 PVKAMTHICGLTLFWIVFKLPLQV-----EPEVLEGCEMFCTAYLDAAWD---------- 348
P+ A+ I L+L+ VF +P E +L + A + A D
Sbjct: 243 PLLAIDLINHLSLYSSVFSVPEATGINLSESSLLPSDALNAAALMHALSDPGKSDDTLSG 302
Query: 349 -------------LTQLIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTF 395
L++L ST N+ RRL AAL P+R+ TY K K P
Sbjct: 303 VPVPPLPAVHPLLLSEL---STKNNPSRRLYLAAAL-TPYRDLTYT-QKNKTHPATEAVL 357
Query: 396 RDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDV-KVNDGQWSKELVDVPDASKLRV 454
R+ LK V + + IP+L +A DV + ++ +D P+ RV
Sbjct: 358 REGLKLG------------VQYNYSNGIPALFAAADVLQKGVAEFEAGNMDKPE----RV 401
Query: 455 LTGFLLRE-------IKKFWRVALLIS 474
G LLRE FW +LL S
Sbjct: 402 WIGLLLRERNVHNPISGSFWATSLLFS 428
>gi|424513056|emb|CCO66640.1| tRNA nucleotidyltransferase [Bathycoccus prasinos]
Length = 633
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 171/388 (44%), Positives = 226/388 (58%), Gaps = 26/388 (6%)
Query: 45 GFLRCKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNL-ET--------- 94
GF R T +PP+ ++ +I LT E ++FS LL+ + + ET
Sbjct: 106 GFSRSPFT----DPPK--TMKENAEIVLTRKEDEVFSLLLDVVNNEKKGETDDGGKATTN 159
Query: 95 ----VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIP 150
LRVAGGWVRDKLLG + DID+ALD +G+EFA KV EYL++ GE SG GVI
Sbjct: 160 VAGLTLRVAGGWVRDKLLGLESNDIDVALDKCLGAEFAAKVNEYLTSKGEEI-SGVGVIQ 218
Query: 151 SNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLF 210
SNP+QSKHLETATMK+ D+W+DFVNLR E Y++ SRIPTM FGT EDA RRDLTIN+L+
Sbjct: 219 SNPEQSKHLETATMKVRDVWLDFVNLRSESYADESRIPTMSFGTPLEDAMRRDLTINALY 278
Query: 211 YNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
YN+N VED TG+GI DLK G TPL K TF+DDPLRVLRA+RF +R+ F L E++
Sbjct: 279 YNLNEKKVEDFTGKGIEDLKIGLCRTPLEAKRTFVDDPLRVLRAVRFASRYAFTLAEDIG 338
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPE 330
A ++V+ L K+SRERVG E+ M+ G P A+ + + + IV E
Sbjct: 339 VAVEDEQVREGLRTKVSRERVGKEVAGMLRGPNPHLAVEWVTKMKMGGIVMDCEETFSME 398
Query: 331 VLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQ----RRLSQYAALF-LPFRNTTYKDNKG 385
+ E + A L G + D R+ Y AL+ L R + K
Sbjct: 399 MQEFGVKAVAVGMRVAMALKMFEGVTEGADGSEETDRKERFYLALWLLGLRESKAFTKKK 458
Query: 386 KKIPVVNYTFRDSLKRKASDAETVMNIH 413
K++P+ +SLK + DAE+V+ H
Sbjct: 459 KEVPLSEVVVMESLKLRNKDAESVVRTH 486
>gi|290994753|ref|XP_002679996.1| tRNA nucleotidyltransferase/poly(A) polymerase [Naegleria gruberi]
gi|284093615|gb|EFC47252.1| tRNA nucleotidyltransferase/poly(A) polymerase [Naegleria gruberi]
Length = 616
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/269 (53%), Positives = 188/269 (69%), Gaps = 4/269 (1%)
Query: 55 EQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYD 114
E+ P P+ + + KI +T E KIFS LL HF L T LRVAGGWVR+KLLG D D
Sbjct: 84 EKLPDGPLTKENQPKIHITQEEEKIFSFLLEVNNHFKLGTTLRVAGGWVRNKLLGLDGDD 143
Query: 115 IDIALDNMMGSEFATKVAEYLSATGETAPS-GFGVIPSNPDQSKHLETATMKLYDLWIDF 173
+DIA+DNMMG++FA V++Y G PS G+I +NP+QSKHLETAT ++ IDF
Sbjct: 144 VDIAIDNMMGADFANYVSQYEKLKG--LPSKAIGIISANPEQSKHLETATTHIFGQSIDF 201
Query: 174 VNLRCEDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHG 232
VNLR E+Y+E SRIP+ ++ GT +DA RRDLTIN+LFYN+N +ED TG+G+ D+KH
Sbjct: 202 VNLRSEEYAEESRIPSNIKLGTPLQDANRRDLTINALFYNLNEQIIEDFTGKGMHDMKHR 261
Query: 233 KIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVG 292
+ TPLPP TFLDDPLRVLR+IRF FDF++ +E+ AA + +V ALA K+SRERVG
Sbjct: 262 IVRTPLPPVQTFLDDPLRVLRSIRFACFFDFLIADEIMDAAHNHDVDVALAEKVSRERVG 321
Query: 293 TEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
TE+ ++ G+ PV A I + + IVF
Sbjct: 322 TELLKILKGHDPVGAFALIGEMKIRHIVF 350
>gi|66800349|ref|XP_629100.1| hypothetical protein DDB_G0293504 [Dictyostelium discoideum AX4]
gi|60462467|gb|EAL60687.1| hypothetical protein DDB_G0293504 [Dictyostelium discoideum AX4]
Length = 558
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 164/366 (44%), Positives = 218/366 (59%), Gaps = 8/366 (2%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I LT+ E ++F L++ +R T LRVAGGWVRDKL G D DIDI LDNMMG FA
Sbjct: 69 IRLTECEIQLFKELMHVIRDSGCGTTLRVAGGWVRDKLRGDDSNDIDITLDNMMGEAFAE 128
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
V ++LS+ GVI SNP+QSKHLETAT+K++D+WIDFVNLR E Y++ SRIP
Sbjct: 129 LVNKHLSSKHHQTHR-IGVIQSNPEQSKHLETATVKVFDMWIDFVNLRSESYTDTSRIPV 187
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
+ GT +DA RRDLTINSLF+NIN + +ED TG+GI DL+ G I TPLP TFLDDPL
Sbjct: 188 ISIGTPLQDALRRDLTINSLFFNINENRIEDFTGQGINDLRDGIIRTPLPSLTTFLDDPL 247
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
RV R+IRF +R +F +DEEL KA + VK A+ +KIS ER+ E D M+S +P ++
Sbjct: 248 RVFRSIRFASRLNFKIDEELFKAGSDPVVKDAIKSKISHERIAKEFDGMLSAEEPYLSIE 307
Query: 310 HICGLTLFWIVFKLPL----QVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRL 365
I LF +F LP + E L+ Y + A D +G D +R
Sbjct: 308 LINKFGLFDCLFSLPTVGLDETYIEQLKNSNKDSEKYCEIA-DSWIGMGKQYEEIDTKRQ 366
Query: 366 SQYAALFLPFRN--TTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLI 423
+AL +PF + K K++ +++Y F + +K D + V I E+ + I
Sbjct: 367 LILSALMIPFYGIKFKNANKKNKEMSIIHYMFIEYIKFSNKDYDDVSLILECSEQLMEHI 426
Query: 424 PSLVSA 429
VSA
Sbjct: 427 IKFVSA 432
>gi|403351421|gb|EJY75202.1| tRNA nucleotidyltransferase [Oxytricha trifallax]
Length = 515
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 155/346 (44%), Positives = 203/346 (58%), Gaps = 31/346 (8%)
Query: 84 LNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP 143
+ ++ NL+T LRVAGGWVRDKL+GK+ DIDIALD+M G EFA + E L G
Sbjct: 1 MQIIKENNLKTTLRVAGGWVRDKLMGKESMDIDIALDDMFGEEFAKMINEKLHPDG---A 57
Query: 144 SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRD 203
FGVI SN ++SKHLETAT++++ + ID VNLR E Y+E SR+PT+ GT EEDAYRRD
Sbjct: 58 KKFGVIKSNSEKSKHLETATLRIHGVMIDLVNLRSEKYTEESRVPTIDIGTPEEDAYRRD 117
Query: 204 LTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDF 263
LTINSLFYNIN VED T RGI DLK G I TPL P TFLDDPLRV+R +RF RFDF
Sbjct: 118 LTINSLFYNINEQKVEDFTQRGIQDLKDGIIRTPLEPLQTFLDDPLRVMRTVRFATRFDF 177
Query: 264 ILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
+ +E+ AA V+ A + K++ ER+G E+DLM+ P ++ ++ + ++KL
Sbjct: 178 KILDEIYDAAKDPRVQVAFSQKVTYERLGKEMDLMLLDRHPSNSIEYLYNFGIIQSLYKL 237
Query: 324 P---------LQVEPEVLEG---CEMFCTAY--LDAAWDLTQLIG-----SSTFNDDQRR 364
P L V+ + E C++ + L + G SS +D+ +
Sbjct: 238 PTSCKELTDDLLVKKHIFESLKLCQVLGALFIILRQQQGIVNFAGFNYSVSSEGDDNGKI 297
Query: 365 LSQ---------YAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKR 401
L Q YAAL LPF Y K V+N DSLK+
Sbjct: 298 LEQFKEFQKNTFYAALLLPFYPYDYPAKNNKLDKVINKVMFDSLKK 343
>gi|325182899|emb|CCA17355.1| tRNA nucleotidyltransferase putative [Albugo laibachii Nc14]
Length = 559
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 180/425 (42%), Positives = 235/425 (55%), Gaps = 50/425 (11%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I+L + E K+F+ L + + + LRVAGGWVRDKLLG D DIDIALD + GS FA
Sbjct: 58 IKLNEVELKLFNFLRDIVEQSDCNVTLRVAGGWVRDKLLGLDSSDIDIALDTITGSGFAQ 117
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDL-WIDFVNLRCEDYSENSRIP 188
V +Y G S GVI NP+QSKHLET TMK D+ W+DFVNLR E YS++ RIP
Sbjct: 118 FVNKYEKEHGGKTHS-IGVIKVNPEQSKHLETITMKFDDIGWVDFVNLRSETYSKDHRIP 176
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
++FGT +EDA RRD TINSLFYNI+ +ED T RGI DLK G I TPL + TFLDDP
Sbjct: 177 DVQFGTPQEDAERRDFTINSLFYNISNDKIEDFTERGIGDLKKGIIRTPLDSRVTFLDDP 236
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG--NQPVK 306
LRVLRAIRF +RF+F LDE L++AA D+VK AL K+SRERVG E+ M+ G P +
Sbjct: 237 LRVLRAIRFASRFNFKLDENLRQAAQLDDVKDALIQKVSRERVGKELLGMLEGPSAHPQR 296
Query: 307 AMTHICGLTLFWIVFKLPLQVEPEVL-EGCEMFCTAYLDAAWD--------LTQLIGSST 357
A T + L LF VF +P Q +L E + + + WD + Q + +
Sbjct: 297 AFTLMHELGLFKCVFLVPQQ--SRILDENAKNVPSDIISQKWDHAYKHSTRMHQYLNTRN 354
Query: 358 ---------FNDDQR---RLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASD 405
N+ +R +L A+ P + ++ KKI V Y ++SLK + D
Sbjct: 355 DCVELEIDKMNEAKRHRYKLRILASFLCPLSSFDVMES-NKKIRVPYYIIKESLKLRNRD 413
Query: 406 AETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKK 465
A + + L+ L + KV D RV TG LLR++
Sbjct: 414 AGDIADT------ILANCGELRNLVHEKVFD----------------RVKTGLLLRKVGS 451
Query: 466 FWRVA 470
W+V
Sbjct: 452 LWKVC 456
>gi|395326043|gb|EJF58457.1| hypothetical protein DICSQDRAFT_139389 [Dichomitus squalens
LYAD-421 SS1]
Length = 553
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 183/444 (41%), Positives = 239/444 (53%), Gaps = 58/444 (13%)
Query: 70 IELTDTETKIFS----CLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
++LT E ++ + C N +ET R+AGGWVRDKLLG +C DIDIAL+NMMG
Sbjct: 3 VQLTAEEDELCTLLDQCTHNMKEAEGIETTCRIAGGWVRDKLLGSECNDIDIALENMMGV 62
Query: 126 EFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENS 185
FA + ++ T + I SNPDQSKHLETA + + +DFVNLR E+Y+ENS
Sbjct: 63 SFAERFVDFCRTTRDLPVKNIAKIESNPDQSKHLETARTTILGIELDFVNLRSEEYAENS 122
Query: 186 RIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATF 244
RIPT + FGT +DA RRD+TIN+LFYN++T VED TGRG+ DL+ G I TPL PK TF
Sbjct: 123 RIPTQVTFGTPLQDALRRDITINTLFYNVHTRLVEDHTGRGLDDLRSGTIRTPLSPKETF 182
Query: 245 LDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
DDPLRVLR IRF +RF F + EL++AA ++ AL KISRERVG E+D M+ G P
Sbjct: 183 TDDPLRVLRCIRFASRFGFTIVPELQEAAKDLTIQEALRVKISRERVGEELDKMMGGRNP 242
Query: 305 VKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDL--------TQLIGS- 355
+ ++ I GL+L+ VF +P + L G + L AA L T ++ S
Sbjct: 243 LLSIDLIDGLSLYASVFYVPENAGIK-LSGPPSSSRSALQAAMILHVLTNPVATSMVLSG 301
Query: 356 -----------------STFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDS 398
ST RRL +AL P+R TY KGK+ P V R+
Sbjct: 302 FTFPSLPPLCPLLLSEISTPAKPLRRLYLASAL-TPYRGLTYL-QKGKERPAVEAVIREG 359
Query: 399 LKRKASDAETVMNIHRVLEKFLSLIPSLVSAED-VKVNDGQWSKELVDVPDASKLRVLTG 457
LK A H +L IP+L SA D ++ W +D P+ R G
Sbjct: 360 LKLGA-------QYH-----YLDGIPALFSAADTLQRGVATWENGGLDRPE----RAWIG 403
Query: 458 FLLRE-------IKKFWRVALLIS 474
LLR+ W +LL S
Sbjct: 404 VLLRDKNVHSVVTGSMWASSLLFS 427
>gi|302779730|ref|XP_002971640.1| hypothetical protein SELMODRAFT_412131 [Selaginella moellendorffii]
gi|300160772|gb|EFJ27389.1| hypothetical protein SELMODRAFT_412131 [Selaginella moellendorffii]
Length = 412
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/305 (48%), Positives = 194/305 (63%), Gaps = 15/305 (4%)
Query: 73 TDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVA 132
T E KI L +R +L+T +RVAGGWVRDKLLG + +D+DIALD+M G +F +V
Sbjct: 7 TREEAKILDALRLAIRECDLKTDVRVAGGWVRDKLLGVESHDLDIALDDMTGQQFCDRVL 66
Query: 133 EYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MR 191
L T + + VI SNP++SKHLET +++ +D VNLR E YS +SRIPT M+
Sbjct: 67 RCLRKTDPSC--SYKVIKSNPERSKHLETTKLEILGGELDVVNLRSETYSNDSRIPTSMK 124
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
FGT EDAYRRDLTINSLFYN+ VED TGRG+ DLK GKI TPLPP TFLDDPLRV
Sbjct: 125 FGTPSEDAYRRDLTINSLFYNVAADKVEDFTGRGVMDLKLGKIRTPLPPLVTFLDDPLRV 184
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
LR+IRF ARF+F LDEEL+ A++D VKAA KI+RER+ EI M+ G P +AM +
Sbjct: 185 LRSIRFAARFNFELDEELECMASADSVKAAFETKITRERISQEIQAMLFGKNPARAMCLL 244
Query: 312 CGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAAL 371
L + ++F P V + ++ ++ C L + ++ +RRL A +
Sbjct: 245 HKLGYWPLIFTRP--VSAQSVKDFQVVCET----------LESVNIADEGERRLVLVAGI 292
Query: 372 FLPFR 376
PF+
Sbjct: 293 LYPFK 297
>gi|224004100|ref|XP_002295701.1| hypothetical protein THAPS_263072 [Thalassiosira pseudonana
CCMP1335]
gi|209585733|gb|ACI64418.1| hypothetical protein THAPS_263072 [Thalassiosira pseudonana
CCMP1335]
Length = 477
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 227/394 (57%), Gaps = 21/394 (5%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
+RVAGGWVRDKLL + D+D+ALD MMG +FA V +L+ P GVI +NP Q
Sbjct: 2 IRVAGGWVRDKLLNQHSSDVDVALDCMMGVQFARIVQSFLALQSNKLPK-VGVIGANPSQ 60
Query: 156 SKHLETATMKLYDLWIDFVNLRCED-YSENSRIPT---MRFGTAEEDAYRRDLTINSLFY 211
SKHLETATM ++ + +DFVNLR E+ Y NSRIPT FG+ EDA RRD TINSLFY
Sbjct: 61 SKHLETATMNIHGIDVDFVNLRAEEVYEANSRIPTSDTRNFGSPLEDALRRDFTINSLFY 120
Query: 212 NINTSSVEDLTGRGIADL-KHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
NI T +ED TGRG+ DL +H KIVTP+ TF DDPLRVLRAIRF R DF+LDE+LK
Sbjct: 121 NIRTRKIEDWTGRGLVDLLEHRKIVTPVDAHETFHDDPLRVLRAIRFCVRLDFVLDEQLK 180
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGN--QPVKAMTHICGLTLFWIVFKLPLQVE 328
AA S V +L K+SRERVG E++ M++G +P A+ I L L VF P
Sbjct: 181 SAAMSKRVHHSLHVKVSRERVGKELEGMLTGKGARPGCALDTIADLHLAGSVFCFPGSFP 240
Query: 329 PEV-LEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKK 387
+ + E+ +A+ + S+ D RL LPF N ++ D+KG++
Sbjct: 241 GDHDYQAGEIIAREKSEASDGMKDSCTLSSTVD--ARLLHLCVFILPFHNLSFPDSKGRE 298
Query: 388 IPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPS----LVSAEDVKVNDGQWSKEL 443
V ++ ++SLK D + V I R +++ L+ L++ + +V G
Sbjct: 299 TSVASHMIKESLKFPTRDIQAVTTILRHVDEMSELLSGIRTQLMAQQKQEVEGGT----P 354
Query: 444 VDVPDASKLRVLTGFLLREIKKFWRVALLISTLL 477
+ +P +LR G LLR +K+ W LL + L
Sbjct: 355 IKLPPPCRLR--AGLLLRSLKEHWVTCLLTAASL 386
>gi|301113854|ref|XP_002998697.1| tRNA nucleotidyltransferase, putative [Phytophthora infestans
T30-4]
gi|262111998|gb|EEY70050.1| tRNA nucleotidyltransferase, putative [Phytophthora infestans
T30-4]
Length = 486
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/351 (46%), Positives = 220/351 (62%), Gaps = 20/351 (5%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLE-TVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
++LT E K+F+ LL+ + VLRVAGGWVRDKLLG+D D+DI LD M G FA
Sbjct: 9 VKLTPAEEKLFAFLLDVAAQPAADGAVLRVAGGWVRDKLLGRDSDDVDIVLDRMTGRAFA 68
Query: 129 TKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYD--LWIDFVNLRCEDY-SENS 185
V + +A G TA + GVI +NPDQSKHLETATM++ + W+DFVNLR E Y SE++
Sbjct: 69 DLVNAFETAQGRTART-VGVIKANPDQSKHLETATMQIGEDMGWVDFVNLRAETYASEDN 127
Query: 186 RIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFL 245
RIPT+ GT ++DA RRD TINSLFYN+ T VED TGRG+ DL+HG++ TPL P+ TFL
Sbjct: 128 RIPTVEIGTPQQDAERRDFTINSLFYNLATKQVEDYTGRGVEDLRHGRLRTPLEPRVTFL 187
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN--Q 303
DDPLRVLRA+RF +RF+ L+++L+ AA +EV+ AL K+SRERVG E+ M++G+
Sbjct: 188 DDPLRVLRAVRFASRFNCTLEDDLRAAAQLEEVRVALVRKVSRERVGKELSGMLTGSAAH 247
Query: 304 PVKAMTHICGLTLFWIVFKLP---LQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFND 360
P +A+ + L L VF LP L+ P E+ + D WD +
Sbjct: 248 PERALCLLHDLHLCESVF-LPSALLENTPTCSPDGEL--ESIDDNVWDRCY-----AYKK 299
Query: 361 DQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMN 411
+ + A+L LPFR +D + + V + +DSLK DA+ V N
Sbjct: 300 HELSVHILASLMLPFRRLCVRDKRRRS--VATFVVQDSLKLPNRDAKDVDN 348
>gi|402220812|gb|EJU00882.1| hypothetical protein DACRYDRAFT_108237 [Dacryopinax sp. DJM-731
SS1]
Length = 522
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 158/344 (45%), Positives = 208/344 (60%), Gaps = 13/344 (3%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I LT E++IF+ L + R + R+AGGWVRDKLL DID+AL + G FA
Sbjct: 3 ITLTPLESQIFTILDSYSRSLSTPVECRIAGGWVRDKLLSLASDDIDVALSFLTGLPFAL 62
Query: 130 KVAEYLSATGETAPSG-FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
+ E+ G P G I +NP++SKHLET + L +DFVNLR EDY+E+SR+P
Sbjct: 63 GLQEWCREHG--VPCGKTSRIEANPEKSKHLETTKFDILGLEMDFVNLRAEDYAEDSRVP 120
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
+ RFGT EDA RRDLTIN+LFYN++T VED TG+G+ADLK+G TPLPP+ TFLDDP
Sbjct: 121 SQRFGTPLEDALRRDLTINALFYNVHTRKVEDFTGKGLADLKNGICRTPLPPRQTFLDDP 180
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LRV RAIRF ARF+F+LD L++AAA EVK AL K+SRERVG E++ M+ G P+ A+
Sbjct: 181 LRVPRAIRFSARFNFVLDPALREAAALKEVKDALMQKVSRERVGIELEKMLKGPNPLLAI 240
Query: 309 THICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSS---TF---NDDQ 362
HI LTL+ ++ LP + L + L A+ L+QL+ TF D Q
Sbjct: 241 EHIHALTLYEAIYLLPAPFS-QSLSSPPLPSQTGLIASSVLSQLLFPPRLRTFQRVQDSQ 299
Query: 363 RRLSQY-AALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASD 405
R + A+ P+ TY + + P V R+ LK D
Sbjct: 300 IRKRLFLASELTPYARVTYTEKRPS--PAVEAITREGLKLSNHD 341
>gi|299116100|emb|CBN74516.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 707
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/265 (52%), Positives = 173/265 (65%), Gaps = 3/265 (1%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
L E I + LL +++ TV+RVAGGWVRDKLLG + DIDIALDN G FA V
Sbjct: 54 LKPNEADILAMLLEAVKYSKTGTVVRVAGGWVRDKLLGLENEDIDIALDNCTGVAFAETV 113
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
YL + G VI +NP+QSKHLETA MK+ +W+D VNLR E Y +SRIP
Sbjct: 114 NAYLKSQGRDE-GKVAVIEANPEQSKHLETARMKIRGVWVDLVNLRTEVYRSDSRIPEAS 172
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
GTAEEDA RRD T+N+LFYN+N VED TGRG+ DL+ G I TPL P TF DDPLRV
Sbjct: 173 LGTAEEDALRRDFTLNALFYNVNEGKVEDKTGRGVDDLRDGIIRTPLSPMITFRDDPLRV 232
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN--QPVKAMT 309
LRA+RF ARF F L E+L+ AA E++AAL K+SRERVGTE+ M++G QP A++
Sbjct: 233 LRAVRFAARFGFALHEDLRAAARDSEIQAALGTKVSRERVGTELCGMITGKMAQPALALS 292
Query: 310 HICGLTLFWIVFKLPLQVEPEVLEG 334
+ L L V+ P + P ++G
Sbjct: 293 LLQDLGLAAAVYAPPEHLVPPPVDG 317
>gi|449550562|gb|EMD41526.1| hypothetical protein CERSUDRAFT_79137 [Ceriporiopsis subvermispora
B]
Length = 569
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 181/453 (39%), Positives = 239/453 (52%), Gaps = 68/453 (15%)
Query: 69 KIELTDTETKIFSCLLNTLRHF-----NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
++ LT+TE ++ + LL+ H + T R+AGGWVRDKLLG D DID+AL++MM
Sbjct: 17 EVRLTETEEQLCT-LLDECTHRLKEDQGVHTACRIAGGWVRDKLLGSDSNDIDVALEDMM 75
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G FA + A + A I SNPDQSKHLETA + + +DFVNLR E+Y+
Sbjct: 76 GVPFAESFVSH-CAKKKLATKQVARIESNPDQSKHLETARTTILGIELDFVNLRSEEYTA 134
Query: 184 NSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKA 242
NSRIPT + FGT +DA RRD+TIN+LFYN++T VED T +G+ DL+ G I TPL P+
Sbjct: 135 NSRIPTQVAFGTPLQDALRRDITINALFYNVHTREVEDHTEKGLEDLRTGTIRTPLAPRE 194
Query: 243 TFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN 302
TFLDDPLRV+R +RF +RF F L EL AA E++ ALA+KISRERVG E+D M+ G
Sbjct: 195 TFLDDPLRVIRCVRFASRFGFDLVLELANAARDPEIQEALASKISRERVGEELDKMMKGR 254
Query: 303 QPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQ 362
P+ A+ I L+L+ +F +P P L L AA LI S DD
Sbjct: 255 DPLGAIALIHDLSLYSSIFDVPTS-SPIKLSAPLASENTALAAA-----LILHSLLRDDS 308
Query: 363 RRLSQYAA-----------------------LFL-----PFRNTTYKDNKGKKIPVVNYT 394
LSQ +A LFL P+R T D K K+ V+
Sbjct: 309 SALSQPSAIQLAPVHPLLLSGLSADSTTRQRLFLACALTPYRGVTCLDAKQKEHAGVSAA 368
Query: 395 FRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVND--GQWSKELVDVPDASKL 452
R++LK V + IP+L SA D+ G+W + V+
Sbjct: 369 LREALKLG------------VQNHYSDGIPALFSASDLLHGPVLGEWGERHVESE----- 411
Query: 453 RVLTGFLLRE-------IKKFWRVALLISTLLY 478
RV TG LLRE W +LL S + +
Sbjct: 412 RVRTGLLLREKAVHNPITGSMWATSLLFSLVQH 444
>gi|307104940|gb|EFN53191.1| hypothetical protein CHLNCDRAFT_137010 [Chlorella variabilis]
Length = 313
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 157/213 (73%), Gaps = 1/213 (0%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
++D IELT+ E +F LL+ + L T LR AGGWVRDKL+G+ DIDIALDN++G
Sbjct: 86 IKDSIELTEEEAALFKELLDATKQAGLGTTLRCAGGWVRDKLMGRTSQDIDIALDNLLGR 145
Query: 126 EFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENS 185
EFA ++ E+L A GE VI SNP+QSKHLETA MK+ LWID VNLR E+Y+ +S
Sbjct: 146 EFADRINEHLKAHGEETRH-VAVIMSNPEQSKHLETARMKVRGLWIDLVNLRSEEYAHHS 204
Query: 186 RIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFL 245
RIPTM FGT EEDA+RRD TINSLFYNINT +ED T +G+ DL+ G I TP+ PK TF+
Sbjct: 205 RIPTMAFGTPEEDAHRRDFTINSLFYNINTGLIEDFTSQGLPDLRAGIIRTPMSPKETFM 264
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEV 278
DDPLRVLRA+RF +RF F L+E L +AAA DE
Sbjct: 265 DDPLRVLRAVRFASRFGFELEEGLLEAAADDEA 297
>gi|336374438|gb|EGO02775.1| hypothetical protein SERLA73DRAFT_176148 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387331|gb|EGO28476.1| hypothetical protein SERLADRAFT_458918 [Serpula lacrymans var.
lacrymans S7.9]
Length = 562
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 240/446 (53%), Gaps = 62/446 (13%)
Query: 66 VRDKIELTDTETKIFS----CLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDN 121
++ +IELT+ E ++ + C N + T R+AGGWVRDKLLGK DIDIAL +
Sbjct: 10 IKSEIELTEAENEVCTLLDECTRNLRDEHGITTSCRIAGGWVRDKLLGKQSNDIDIALTD 69
Query: 122 MMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDY 181
MMG FA ++ Y+S + I SNP QSKHLETA L + +DFVNLR E+Y
Sbjct: 70 MMGVTFAEHLSSYISKHKDLDVHKIAKIESNPGQSKHLETARTTLCGVELDFVNLRSEEY 129
Query: 182 SENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPP 240
+ENSRIPT + FGT +DA RRD+TIN+LFYN++ +VED T +G+ DLK+G I TPL P
Sbjct: 130 AENSRIPTEVAFGTPLQDALRRDITINALFYNVHDRAVEDHTNKGLDDLKNGIIRTPLEP 189
Query: 241 KATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVS 300
TF DDPLRVLR IRF +RF F + EL++AA ++ AL+ KISRERVG EID M+
Sbjct: 190 LETFRDDPLRVLRCIRFASRFGFEMVPELREAARDPGIQEALSVKISRERVGEEIDKMMK 249
Query: 301 GNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFND 360
G +P++++ I L+L+ +F +P PE+++ + +LD++ T ++ + D
Sbjct: 250 GPKPLRSIKLIHELSLYSCIFSIP----PEIMQIMSAPLS-HLDSSLAATSVLHALISTD 304
Query: 361 -------------------------DQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTF 395
+ RL +ALF P+ TY D K ++ V
Sbjct: 305 STSISASHLPPLHPTLLHATRDVVGNAARLYLASALF-PYHVITYTDKKKRQHLAVEAVL 363
Query: 396 RDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVL 455
++ LK + +L IPSL +A D+ K+ + RV+
Sbjct: 364 QEGLKLGKQN------------HYLDGIPSLFAAADLL-------KDPISKIGMPSERVV 404
Query: 456 TGFLLRE-------IKKFWRVALLIS 474
G LLRE W +LL S
Sbjct: 405 IGSLLREKVVHNIHTGSHWASSLLFS 430
>gi|302828254|ref|XP_002945694.1| hypothetical protein VOLCADRAFT_115637 [Volvox carteri f.
nagariensis]
gi|300268509|gb|EFJ52689.1| hypothetical protein VOLCADRAFT_115637 [Volvox carteri f.
nagariensis]
Length = 220
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 159/218 (72%), Gaps = 2/218 (0%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
V D I LT E ++F LL +RH +T LR AGGWVRDKLLG+D DIDIALDNM+G
Sbjct: 1 VLDTITLTQREQELFDTLLAAVRHAGADTSLRCAGGWVRDKLLGRDSDDIDIALDNMLGK 60
Query: 126 EFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENS 185
+FA V EYL + G A VI SNPDQSKHLETA MK+ ++WID VNLR E Y+ +S
Sbjct: 61 DFADLVNEYLKSQGREARHA-AVIQSNPDQSKHLETARMKIGEMWIDLVNLRSETYAADS 119
Query: 186 RIPTMRFGTAEEDAYRRDLTINSLFYNINTSS-VEDLTGRGIADLKHGKIVTPLPPKATF 244
RIP+M FGT E+DA RRD TIN+LFYNI VEDLTGRG+ DL+ G I TPLPP+ TF
Sbjct: 120 RIPSMTFGTPEQDAMRRDFTINALFYNITQRGVVEDLTGRGLQDLRDGLIRTPLPPRETF 179
Query: 245 LDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAAL 282
LDDPLRVLRA+RFG RF F L ++ +AAAS++V + L
Sbjct: 180 LDDPLRVLRAVRFGTRFGFRLHPDILEAAASEQVCSGL 217
>gi|399218465|emb|CCF75352.1| unnamed protein product [Babesia microti strain RI]
Length = 541
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 245/461 (53%), Gaps = 39/461 (8%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
KI+ TD E ++ L L H+ +ETVLR+AGGWVRDK+LG +C DIDIAL NM G EFA
Sbjct: 43 KIQFTDKENQLIDFLKGCLAHYKIETVLRIAGGWVRDKILGYNCNDIDIALSNMTGVEFA 102
Query: 129 TKVAEY-LSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDY-SENSR 186
++EY + +G + GFGVI P+ SKHLET +++ L +DFVNLR + Y S+++R
Sbjct: 103 NLLSEYNMKHSGRSI--GFGVIEKRPEHSKHLETVALQIGGLQVDFVNLRHDSYTSDDNR 160
Query: 187 IPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLD 246
IP +R GT +EDAYRRD T+NSLFYNINT +ED TG G+ DL++G I TPL P TFLD
Sbjct: 161 IPEIRIGTEKEDAYRRDFTVNSLFYNINTGQLEDFTGMGLDDLRNGIIRTPLDPVVTFLD 220
Query: 247 DPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI-DLMVSGNQPV 305
DPLR++RAIRF RF F L +++ A++ E+ A K++R R+ EI +++V +QP
Sbjct: 221 DPLRIVRAIRFATRFGFQLTDQIIDASSKSEITNAFMKKVTRSRLSNEIYNILVKSDQP- 279
Query: 306 KAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRL 365
++ + L + +LP V + ++ IG + + +L
Sbjct: 280 QSFHLLNKFNLLPWLAELPKGVNYTIDISNLTHSNQWISKGIKY-MYIGKQLSTNSRNKL 338
Query: 366 -----------SQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHR 414
S Y ALF+ +T NK K I + +Y ++SLK +
Sbjct: 339 PFATISNEIIDSFYIALFVKPISTIQYYNKIKPIDLTDYVIKESLKLRKR---------- 388
Query: 415 VLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKL-RVLTGFLLREIKKFWRVALLI 473
+ ++++ N + + D+ K+ R G+++R K+W+ + I
Sbjct: 389 ----------HYIQSKELNANSLLFKTYIDDIDSLDKVERGELGYMIRTCGKYWKESFFI 438
Query: 474 STLLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGM 514
+ + Y D + +D+ D + I +G+
Sbjct: 439 NFITYIYDNSKNNDYQSLLNNIDNYADKHIKLYNKIIDMGL 479
>gi|340503777|gb|EGR30303.1| tRNA cca-pyrophosphorylase, putative [Ichthyophthirius multifiliis]
Length = 402
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 122/267 (45%), Positives = 182/267 (68%), Gaps = 9/267 (3%)
Query: 71 ELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATK 130
++TD E ++F+ LLN + ++ +R+AGGWVRDK+L K+C+DIDIALDN+MG +F +
Sbjct: 11 QITDKEKQLFNYLLNFINQKYIDVTMRIAGGWVRDKILKKECHDIDIALDNLMGEDFLNQ 70
Query: 131 VAEYLSATGE-TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
E++ G+ S G+I SNP+QSKHL+TAT ++ +DFVNLR E+Y+ENSRIP
Sbjct: 71 FTEFIKENGQQNLISKIGIIKSNPEQSKHLQTATCSIFGFDVDFVNLRGEEYTENSRIPY 130
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
++FGT +DA RRDLTIN+LFYNIN + +ED TG+GI DL++ I TPL P TFLDDPL
Sbjct: 131 IKFGTPLQDAERRDLTINALFYNINQNKIEDFTGKGINDLQNKFIRTPLEPLQTFLDDPL 190
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
R+LR RF ++F + + E+ KA + +K+ L++K+S+ER+ TE+ ++ + +
Sbjct: 191 RILRTFRFASKFQYQISPEIIKALKDERIKSNLSSKVSKERIRTELTKIILDQNCILGLK 250
Query: 310 HICGLTLFWIVFKLPLQVEPEVLEGCE 336
+I L+ +VF E+ E C+
Sbjct: 251 YIYENNLWPVVF--------EINENCD 269
>gi|298712997|emb|CBJ26899.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 719
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 140/304 (46%), Positives = 185/304 (60%), Gaps = 27/304 (8%)
Query: 48 RCKATMSEQEPPRPVVVQVRD----------KIELTDTETKIFSCLLNTLRHFNLETVLR 97
R + S Q P P ++ V KI LT E K+F LL + + T LR
Sbjct: 93 RHSSAFSPQHPQEPDLLPVARSPNGHLRNDIKIILTKEEDKLFKTLLEMVEKEKMGTTLR 152
Query: 98 VAGGWVRDKLLGKDC------------YDIDIALDNMMGSEFATKVAEYLS-----ATGE 140
VAGGWVRDKL+G++ DIDIALDN MG +FA ++ YLS
Sbjct: 153 VAGGWVRDKLVGQEQGFHQRHLSKVNKMDIDIALDNCMGGDFAARLNRYLSRRKSDPGAR 212
Query: 141 TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
S +I SNP++SKHLETAT+++ + W+DFVNLR E Y ++SRIP++ GT ED++
Sbjct: 213 KRMSKVALIASNPEKSKHLETATLRIDNFWVDFVNLRTESYVQDSRIPSINIGTPMEDSF 272
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRDLTINSLFYN+NT +VED TG+G +DL+ G + TPLPP T LDDPLR LRA+RF +R
Sbjct: 273 RRDLTINSLFYNVNTGTVEDYTGKGTSDLRLGLVRTPLPPCETLLDDPLRALRAVRFASR 332
Query: 261 FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIV 320
F + EL +A +V AL K+SRERVG E+D MV P++A + G+ + +V
Sbjct: 333 LGFRVHPELMEAGRDPKVHEALCMKVSRERVGCELDQMVRSASPLRAFELMEGMKILPMV 392
Query: 321 FKLP 324
F LP
Sbjct: 393 FPLP 396
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Query: 360 DDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKF 419
++ RRL YAA LP ++ + K +P++ D LK +A D + V+ + F
Sbjct: 510 EEMRRLGLYAAFLLPLADSMCPNQKRANVPLIQVMMADYLKLRAKDPQRVLQLQSAAMDF 569
Query: 420 LSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLIS 474
L+ + N + + P R+ G +R + WRVAL++
Sbjct: 570 QLLLRKTARGPLTRANS-----KPITFP-----RLAPGLTMRAVGPLWRVALVLG 614
>gi|409051238|gb|EKM60714.1| hypothetical protein PHACADRAFT_110357 [Phanerochaete carnosa
HHB-10118-sp]
Length = 551
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 232/442 (52%), Gaps = 52/442 (11%)
Query: 64 VQVRDKIE--LTDTETKIFSCLLNTLR----HFNLETVLRVAGGWVRDKLLGKDCYDIDI 117
VQ+ +K+E LTD E +I + L + +ET R+AGGWVRDKLLG DIDI
Sbjct: 4 VQIPEKMEIHLTDAENEICALLDGCTKWMKERHGVETSCRIAGGWVRDKLLGLQSNDIDI 63
Query: 118 ALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLR 177
AL+ MMG FA + Y + + NPD+SKHLETA + D+ +DFVNLR
Sbjct: 64 ALEQMMGLPFAEEFQAYCGSVMNIPIEKIAKVERNPDRSKHLETAKATVLDIELDFVNLR 123
Query: 178 CEDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVT 236
E+Y+++SRIPT + FGT +DA RRD+TIN+LFYN+++ VED T +G++DLK G I T
Sbjct: 124 SEEYADDSRIPTQVAFGTPLQDALRRDMTINALFYNVHSREVEDHTQKGLSDLKDGIIRT 183
Query: 237 PLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEID 296
PL PK TF+DDPLRV+R +RF +RF F L EL++AA E++ AL AKISRERVG E+D
Sbjct: 184 PLSPKETFMDDPLRVIRCVRFASRFGFELVPELQEAARDAEIQHALRAKISRERVGEELD 243
Query: 297 LMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEV---LEGCEM-FCTAYLDAAWDLTQL 352
M+ G P+ A+ I L L+ +F +P V PE+ L ++ AY+ L +
Sbjct: 244 KMMKGRNPLHAIELINDLRLYTSIFYIPPHVAPELSAPLGSPKLGLAAAYILETLTLPEK 303
Query: 353 IGSS-------------TFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSL 399
S+ T+ R A P+R TY D K K V R+
Sbjct: 304 QPSTNLPALHPLLAAAATYESSTRPRLYLACALTPYRGLTYDDIKNKCHLAVEAAIRNGT 363
Query: 400 KRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFL 459
K A + +L IP L +A ++ N V RV G L
Sbjct: 364 KLGAQN------------HYLDGIPVLFTAAEMLKN---------PVIGGEDERVRIGLL 402
Query: 460 LR-------EIKKFWRVALLIS 474
LR +W +LL S
Sbjct: 403 LRNKNVHNTHTGSYWATSLLFS 424
>gi|156837098|ref|XP_001642583.1| hypothetical protein Kpol_1075p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156113130|gb|EDO14725.1| hypothetical protein Kpol_1075p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 549
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 161/445 (36%), Positives = 236/445 (53%), Gaps = 56/445 (12%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETV------LRVAGGWVRDKLLGKDCYDIDIALDNMM 123
++L E K+ L++ +N E LR+ GGWVRDKLLG + +D+DIA++ M
Sbjct: 36 VQLNSVEQKVCQLLIDFTNDYNSEQKPTEPLELRITGGWVRDKLLGSESHDLDIAINIMS 95
Query: 124 GSEFATKVAEYLSATGET---APSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCED 180
G FATK+ ++L + P I NP++SKHLETAT KL+D+ +DFVNLR E+
Sbjct: 96 GENFATKLNDFLQIHYDRYNLKPHSIHKIDKNPEKSKHLETATTKLFDVEVDFVNLRSEE 155
Query: 181 YSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPP 240
Y+ENSRIPT+ FGT E+DA RRD T+N+LFYNI+ VED TGRGI DL G + TPLPP
Sbjct: 156 YTENSRIPTVEFGTPEQDALRRDATLNALFYNISKKEVEDFTGRGIEDLSAGILRTPLPP 215
Query: 241 KATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVS 300
+ TFLDDPLRVLR IRF +RF+F +++ +K A + ++ A KISRER+G E++ +
Sbjct: 216 RKTFLDDPLRVLRLIRFASRFNFQIEDSVKNAMSDKDINKAFYTKISRERIGVEMEKIFD 275
Query: 301 GNQPVKAM-----THICGLTLFW----IVFKLPLQVEPEVLEGC-EMFCTAYL-DAAWDL 349
G P+ + T I + W + + P+ E++ L D W +
Sbjct: 276 GKTPLIGLSLIQETCIDNVIFHWHNDQSIIDYNEESNPQQFALINEIYDKNILNDHLWKV 335
Query: 350 TQLIGS------------STFNDDQ--RRLSQYAALFLPFRNTTYKDNKGKK----IPVV 391
++ ++DQ +R+ +++ LPF+N N KK IPV
Sbjct: 336 ISIVKDRELLSLQLPTLFDKLDNDQSFKRMYLLSSILLPFQNLMIIWNPKKKMNNTIPVT 395
Query: 392 NYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASK 451
+D LK ++A V I +E + L+ K + + S + D+
Sbjct: 396 ESIVKDGLKMSKNEAVVVSQIVNGIESYYELV--------YKFKNDRVSLKRSDI----- 442
Query: 452 LRVLTGFLLREIKKFWRVALLISTL 476
G LR+ K W +A +S L
Sbjct: 443 -----GNFLRDFKGNWEIAHYVSLL 462
>gi|294900736|ref|XP_002777091.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239884545|gb|EER08907.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 255
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/231 (55%), Positives = 166/231 (71%), Gaps = 1/231 (0%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I LT+ ET IF +++T+ HF+L TV R AGGWVRDKLLGK+ DIDIA+D+M G FA
Sbjct: 17 IVLTEKETAIFKVIMDTIHHFHLNTVPRAAGGWVRDKLLGKESDDIDIAVDDMSGEAFAY 76
Query: 130 KVAEYLSATGETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
KV ++L+ T A S GV+ +NPDQSKHLETAT++++D+ +D NLR E Y+ +SRIP
Sbjct: 77 KVKDFLTRTSPGASCSSVGVVRANPDQSKHLETATLRVFDISLDVNNLRTETYTLDSRIP 136
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
+ GT +EDA RRD TIN+LFYN+ T+SVED TG G+ADL+ G I TPL P TF DDP
Sbjct: 137 VVALGTPQEDASRRDFTINALFYNLRTASVEDFTGTGLADLRAGVIRTPLEPTITFQDDP 196
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
LR+LRA+RF R F LD+E+ KAA+ + L K+SRER G EI M+
Sbjct: 197 LRILRAVRFSTRLGFKLDDEIMKAASDPNIYGLLLVKVSRERWGVEIHKML 247
>gi|219126569|ref|XP_002183527.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405283|gb|EEC45227.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 631
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 165/431 (38%), Positives = 231/431 (53%), Gaps = 50/431 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSG-FGVIPSNPD 154
+RVAGGWVRDKLLG + +D+D+A+D++ G +FA V YL +G GVI +NP
Sbjct: 88 IRVAGGWVRDKLLGLETHDVDVAVDSLTGVQFAKLVQGYLQQNSTEQSAGRIGVIAANPS 147
Query: 155 QSKHLETATMKLYDLWIDFVNLRCED-YSENSRIPTMRFGTAEEDAYRRDLTINSLFYNI 213
QSKHLETATMK+ + +DF NLR E+ Y ++SRIP +RFG+ EDA RRD T+N+LF+N+
Sbjct: 148 QSKHLETATMKIGRIEVDFCNLRAEELYEDHSRIPIVRFGSPLEDAKRRDFTVNALFFNL 207
Query: 214 NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+T VED T GI DL +IVTPL P TFLDDPLRV+RAIRF R+DF LD L+ A
Sbjct: 208 HTRLVEDWTKSGIPDLISRRIVTPLEPVRTFLDDPLRVIRAIRFAVRYDFELDPALEAAC 267
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGN--QPVKAMTHICGLTLFWIVFKLPLQVEPEV 331
E+ AL K+SRERVG E++ M+SG P+ AM I L L VF LP E V
Sbjct: 268 MCTEIHQALHVKVSRERVGKELEGMLSGRGANPIMAMDLIARLKLAGSVFCLPKVGEDNV 327
Query: 332 --LEGCEMFCTAYL------------DAAWD----LTQLI------------GSSTFNDD 361
++G + AY + W+ L QL + +
Sbjct: 328 SFIKG-HILGNAYTGQHDSNDIRKLRELGWEESRALLQLAPFVVASHIRTASKQAAKSGY 386
Query: 362 QRRLSQYAALFLPFRNTTYKDNK--GKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKF 419
+RL LPFR Y + + K++ ++Y FR+ +K K D + ++ ++ ++
Sbjct: 387 DKRLLPLGVFMLPFRTLLYGERQKLDKELLAIHYVFREGIKFKNKDIQAMVTLYENVDNM 446
Query: 420 LSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLLYP 479
+SL+ DG +V RV G LR K+ W LL++T++
Sbjct: 447 ISLLTG--------AADGFEGGNVVSFS-----RVDVGMQLRATKELWVTCLLMATIVKL 493
Query: 480 THVDHTEDMLN 490
+D N
Sbjct: 494 RQQKRRDDGFN 504
>gi|389751408|gb|EIM92481.1| hypothetical protein STEHIDRAFT_89507 [Stereum hirsutum FP-91666
SS1]
Length = 603
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 169/478 (35%), Positives = 244/478 (51%), Gaps = 72/478 (15%)
Query: 48 RCKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHF----NLETVLRVAGGWV 103
R + +S P P+ + + +++LT+ E ++ + L + H T RVAGGWV
Sbjct: 30 RSVSFLSPSMPSNPIHMPEKMEVKLTEVEDQLCTLLDDCRNHLAETQGKNTTCRVAGGWV 89
Query: 104 RDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETAT 163
RDKLLG +D+DIAL +MMG +FA + AEY + + NP QSKHLETA
Sbjct: 90 RDKLLGSQSHDMDIALSDMMGYDFAVEFAEYAEKVKDIPVKSIAKVKGNPGQSKHLETAK 149
Query: 164 MKLYDLWIDFVNLRCEDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLT 222
+ +DFVNLR E+Y++ SRIPT + FGT +DA RRD+TIN+LFYN++T SVED
Sbjct: 150 TVFMGIELDFVNLRDEEYADESRIPTKVTFGTPLQDALRRDITINTLFYNVHTRSVEDHC 209
Query: 223 GRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAAL 282
G+G+ D+++G I TPL P+ TFLDDPLRV+R +RF +RF F + EL+++A E++ A+
Sbjct: 210 GKGLDDMRNGIIRTPLEPRQTFLDDPLRVIRCVRFASRFGFTMVSELEESARDIEIQTAI 269
Query: 283 AAKISRERVGTEIDLMVS------------------GNQPVKAMTHICGLTLFWIVFKLP 324
KI+RERVG EID M+S G P++++ I L+LF +F +P
Sbjct: 270 TQKITRERVGDEIDKMMSGMPVELFQRPTTHGSPYLGRDPLRSIQLIHSLSLFPTIFYIP 329
Query: 325 LQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSST------------FNDDQRRLSQYAALF 372
+ L + + +A L L+ ST + S A L+
Sbjct: 330 PPIS-STLSSQPTSSSHSVASATILHALLNPSTSPFPYPPLHDLLTSHTASSPSTIARLY 388
Query: 373 L-----PFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLV 427
L P+ TY K K P V R+ LK + +L IPSL
Sbjct: 389 LSCALTPYHGITYTGKKNKIGPAVEAAIREGLKIGTKN------------HYLDGIPSLF 436
Query: 428 SAEDV----KVNDGQWSKELVDVPDASKLRVLTGFLLREIK-------KFWRVALLIS 474
+A D+ ++D +W+ + RV G LLR I W V+LL S
Sbjct: 437 AAADLLRSPTLDDERWT--------SPSERVAIGLLLRNISIHNPLIDAHWTVSLLFS 486
>gi|403414607|emb|CCM01307.1| predicted protein [Fibroporia radiculosa]
Length = 562
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 162/428 (37%), Positives = 226/428 (52%), Gaps = 52/428 (12%)
Query: 70 IELTDTETKIFSCL---LNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSE 126
++LT E ++ + L ++ ++T R+AGGWVRDKLLG DID+AL+++MG
Sbjct: 3 VKLTPQEDQLCTLLDECAEEMKAEGVQTSCRIAGGWVRDKLLGLQSNDIDVALEDIMGVI 62
Query: 127 FATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSR 186
FA K Y G I SNP+QSKHLETA + +DFVNLR E+Y+ SR
Sbjct: 63 FAQKFISYCYNEKRLEIKGVTKIASNPEQSKHLETARTTVLGYELDFVNLRSEEYASGSR 122
Query: 187 IPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFL 245
IPT + FGT +DA RRD+TIN+LFYN++T SVED TG+G+ D++HG I TPLPP+ TF+
Sbjct: 123 IPTQVTFGTPLQDAMRRDITINALFYNVHTRSVEDCTGKGLEDIRHGLIRTPLPPRETFM 182
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
DDPLRV+R +RF +R F L EL+ A E++ A+ +KISRERVG E++ M+ G P+
Sbjct: 183 DDPLRVIRCVRFASRLGFDLVPELQDAVRDPEIQTAVVSKISRERVGDELNKMMKGRDPL 242
Query: 306 KAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIG--SSTFNDDQR 363
+++ I L+L+ VF LP +E L G + AA L +G S T
Sbjct: 243 RSIQLIHNLSLYGPVFHLPPSLESN-LSGTPTSPEDAVKAASILNLFLGNTSPTSYTQNF 301
Query: 364 RLSQYAALFL----------------------------PFRNTTYKDNKGKKIPVVNYTF 395
L+ ++LF+ P+R TY KGK+ V+
Sbjct: 302 SLTALSSLFIPQLHPLLLADVTKHPAVLARVWLACALTPYRGLTYVGRKGKRCSVIEGIL 361
Query: 396 RDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVND-GQWSKELVDVPDASKLRV 454
RD LK + +L P+L +A DV W+ D + RV
Sbjct: 362 RDGLKIGTQN------------HYLDGTPALFAAWDVLSESISTWTPASTD----GEERV 405
Query: 455 LTGFLLRE 462
G LLR
Sbjct: 406 RQGLLLRH 413
>gi|452824277|gb|EME31281.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Galdieria
sulphuraria]
Length = 596
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 226/415 (54%), Gaps = 28/415 (6%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLL--GKDCYDIDIALDNMMGSEF 127
I+L E ++F LL+ + T LRVAGGWVRDKLL K+ DID+ALDNMMG EF
Sbjct: 85 IDLEAREEELFRLLLDAVNVLETGTTLRVAGGWVRDKLLKINKEDPDIDLALDNMMGREF 144
Query: 128 ATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRI 187
A K+ YL + T +I NP+QSKHLETA +K+ +++D VNLR E Y+ +SRI
Sbjct: 145 ANKLQFYLKSRNITC-GHIAIIQQNPEQSKHLETARVKVNGIYLDLVNLRKESYAHHSRI 203
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDD 247
P ++ GT EDA RRDLTINSLFYN+N +ED +G+G DLK+ I TP+ PK T LDD
Sbjct: 204 PEIQIGTPYEDAVRRDLTINSLFYNLNEDIIEDFSGKGFDDLKNRIIRTPMEPKETLLDD 263
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
PLR LR IRF RFDF +D L S EV AL K+SRERVG+EID M+ V+
Sbjct: 264 PLRALRVIRFATRFDFDMDPALYNCCKSREVHVALGEKVSRERVGSEIDYMLKTASYVRG 323
Query: 308 MTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQL--------IGSSTFN 359
+ + L+ VF + P V++ ++ + +++L + +
Sbjct: 324 IGILYETGLYKAVF-----IHPRVIDSSYSLEDSFYQSLLSISKLNWIRQRKILSYHSAI 378
Query: 360 DDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKF 419
++ L + + F D++ K+ + Y R LKR+ + +++M VLE
Sbjct: 379 EEHTILEELGVFSVAFHFYETFDDRN-KVNLAQYILRHCLKRRVRECDSIMT---VLEGS 434
Query: 420 LSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLIS 474
L+ L++ DV +D + D LR+ G +L+ W +A ++
Sbjct: 435 TELMAHLIN--DVPSSD------MSRGVDGEPLRLTIGRILKRTGSLWNIAFKVA 481
>gi|294941628|ref|XP_002783160.1| tRNA nucleotidyltransferase, putative [Perkinsus marinus ATCC
50983]
gi|239895575|gb|EER14956.1| tRNA nucleotidyltransferase, putative [Perkinsus marinus ATCC
50983]
Length = 511
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/231 (55%), Positives = 165/231 (71%), Gaps = 1/231 (0%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I LT+ ET IF +++T+ HF+L TV R AGGWVRDKLLGK+ DIDIA+D+M G FA
Sbjct: 17 IVLTEKETAIFKVIMDTIYHFHLNTVPRAAGGWVRDKLLGKESDDIDIAVDDMSGEAFAY 76
Query: 130 KVAEYLSATGETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
KV ++L+ T A S GV+ +NPDQSKHLETAT++++D+ +D NLR E Y+ +SRIP
Sbjct: 77 KVKDFLTRTSPGASCSSVGVVRANPDQSKHLETATLRVFDISLDVNNLRTETYTLDSRIP 136
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
+ GT +EDA RRD TIN+LFYN+ T+SVED TG G+ DL+ G I TPL P TF DDP
Sbjct: 137 VVALGTPQEDASRRDFTINALFYNLRTASVEDFTGTGLDDLRAGVIRTPLEPTITFQDDP 196
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
LR+LRA+RF R F LD+E+ KAA+ + L K+SRER G EI M+
Sbjct: 197 LRILRAVRFSTRLGFKLDDEIMKAASDPNIYGLLLVKVSRERWGVEIHKML 247
>gi|409083275|gb|EKM83632.1| hypothetical protein AGABI1DRAFT_117129, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 503
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 177/460 (38%), Positives = 239/460 (51%), Gaps = 75/460 (16%)
Query: 70 IELTDTETKIFSCL----LNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
I LT+ E ++ L N ++ TV R+AGGWVRDKLLG +C+DIDIAL N MG
Sbjct: 19 IRLTEDEDRVCQLLDDYVKNAQEDVSMRTVCRIAGGWVRDKLLGSECHDIDIALSNSMGF 78
Query: 126 EFATKVAEYLSATG-ETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSEN 184
FA +A Y + G ET I NP+QSKHLETAT K++ L +D VNLRCE+Y+ +
Sbjct: 79 TFAEGLAAYAARNGVETGT--ISKIAQNPEQSKHLETATFKVFGLEVDIVNLRCEEYASD 136
Query: 185 SRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKAT 243
SRIPT + FGT +DA RRD+TIN+LFYN+++ VED TG+G DL+ G I TPLPP+ T
Sbjct: 137 SRIPTGVSFGTPLQDALRRDITINALFYNVHSREVEDFTGKGRDDLESGIIRTPLPPRET 196
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
FLDDPLRVLR IRF +R F EL++AA ++ A+ K++RERVG E+ M+ G++
Sbjct: 197 FLDDPLRVLRCIRFASRLGFKTVPELEEAAKDPLIQKAIVNKVARERVGEELVKMMRGDR 256
Query: 304 ---------------PVKAMTHICGLTLF-WIVFKLPLQV--------EPEVLEGCEMFC 339
P +++ I L+L+ I F +P EP + +
Sbjct: 257 VFCRCFGPNQKIGRDPTRSIELIYNLSLYPAIFFAIPEAFSSFLSGMPEPARIGWTTVLV 316
Query: 340 TAYL---------DAAWDLTQLIGSSTFNDDQRRLSQY-AALFLPFRNTTYKDNKGKKIP 389
YL +L + + ND Y AA P+R TY+D K K+
Sbjct: 317 LRYLFERREQKSGSKIPNLDSVYYEAVVNDPTCSSRLYLAAALTPYRRLTYRDTKSKEKH 376
Query: 390 VVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDA 449
+V R+SLK H FL IP L +A D+ + V D+
Sbjct: 377 LVELVLRESLKLGT-------QFH-----FLDGIPPLFTACDLIAS---------AVSDS 415
Query: 450 SKL-----RVLTGFLLRE-------IKKFWRVALLISTLL 477
SKL RV G LLRE + W + L S +L
Sbjct: 416 SKLHPSSERVGIGLLLRERTIHNPVVGVHWTSSFLFSLVL 455
>gi|348670342|gb|EGZ10164.1| hypothetical protein PHYSODRAFT_522402 [Phytophthora sojae]
Length = 483
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 162/352 (46%), Positives = 214/352 (60%), Gaps = 20/352 (5%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLE-TVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
++LT E K+FS LL VLRVAGGWVRDKLLG+D D+D+ LD M G FA
Sbjct: 9 VKLTAAEEKLFSFLLEVAAQPAANGAVLRVAGGWVRDKLLGRDSDDVDVVLDCMTGRAFA 68
Query: 129 TKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYD--LWIDFVNLRCEDY-SENS 185
V + +A G A GVI +NP+QSKHLETATM++ D W+DFVNLR E Y SE++
Sbjct: 69 DLVNAFETAQGRQA-HAVGVIKANPEQSKHLETATMQIGDDLGWVDFVNLRAETYASEDN 127
Query: 186 RIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFL 245
RIPT+ GT ++DA RRD TINSLFYN+ T VED TGRG+ DL+ G++ TPL P+ TFL
Sbjct: 128 RIPTVEIGTPQQDAERRDFTINSLFYNLATRQVEDFTGRGVEDLRFGRLRTPLEPRVTFL 187
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN--Q 303
DDPLRVLRA+RF +RF+ L+E+L+ AA +EVK AL K+SRERVG E+ M++G+
Sbjct: 188 DDPLRVLRAVRFASRFNCTLEEDLRTAAQLEEVKVALVRKVSRERVGKELSGMLTGSAAH 247
Query: 304 PVKAMTHICGLTLFWIVFKLP---LQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFND 360
P +A+ + L L VF LP L+ P E+ + WD +
Sbjct: 248 PERALRLLHELHLCESVF-LPSALLEKTPVCRPDGEVEQVG--ENVWDRC-----YAYEK 299
Query: 361 DQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNI 412
+ + A+ LPFR +D + + V + +DSLK DA+ V NI
Sbjct: 300 HKLHVRILASFLLPFRGLCARDKRRRS--VATFVVQDSLKLPNRDAKDVDNI 349
>gi|118378166|ref|XP_001022259.1| polyA polymerase family protein [Tetrahymena thermophila]
gi|89304026|gb|EAS02014.1| polyA polymerase family protein [Tetrahymena thermophila SB210]
Length = 516
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/257 (47%), Positives = 175/257 (68%), Gaps = 2/257 (0%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
KI L + E ++F LL ++ N++ VLR AGGWVRDK+LG++C+DIDI LD M G +F
Sbjct: 8 KITLNEKEKQLFDFLLEFVKAKNIQVVLRSAGGWVRDKILGQECHDIDITLDTMTGEQFI 67
Query: 129 TKVAEYLSATG-ETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRI 187
+ +YL G E SG GVI SNPD+SKHLET T K++ ID NLR E+Y++ SRI
Sbjct: 68 NLLIDYLKEKGQEDLISGHGVIKSNPDKSKHLETVTFKIFGYDIDIANLRHEEYTK-SRI 126
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDD 247
PTM+FGT +DA RRDLTINS+FYNINT +ED TG+G++DL++ I TPL P TF+DD
Sbjct: 127 PTMKFGTPLQDAERRDLTINSMFYNINTCQIEDFTGKGLSDLQNKIIRTPLDPTQTFIDD 186
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
PLR+LR RF ++ F + ++ +A ++++ +L K+SRER+ TE++ ++
Sbjct: 187 PLRILRTFRFATKYSFSIVPDIIEALKQEQIRISLEEKVSRERIRTELEKILKDKNVEIG 246
Query: 308 MTHICGLTLFWIVFKLP 324
+ I L+ IVF++P
Sbjct: 247 LNLIFQNNLWSIVFQMP 263
>gi|302764532|ref|XP_002965687.1| hypothetical protein SELMODRAFT_84963 [Selaginella moellendorffii]
gi|300166501|gb|EFJ33107.1| hypothetical protein SELMODRAFT_84963 [Selaginella moellendorffii]
Length = 231
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/231 (58%), Positives = 164/231 (70%), Gaps = 7/231 (3%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I LT E KI L +R +L+T +RVAGGWVRDKLLG + +D+DIALD M G +F
Sbjct: 4 IVLTREEAKILDALRLAIRKCDLKTEVRVAGGWVRDKLLGVESHDLDIALDGMTGQQFCD 63
Query: 130 KVAEYLSATGETAPS-GFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
+V L +T PS + VI SNP++SKHLET +++ +D VNLR E YS +SRIP
Sbjct: 64 RV---LPCLRKTDPSCSYKVIKSNPERSKHLETTKLEILGGELDVVNLRSETYSNDSRIP 120
Query: 189 T-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIA--DLKHGKIVTPLPPKATFL 245
T M+FGT EDAYRRDLTINSLFYN+ VED TGRG+ DLK GKI TPLPP TFL
Sbjct: 121 TSMKFGTPSEDAYRRDLTINSLFYNVAADKVEDFTGRGLCAMDLKLGKIRTPLPPLVTFL 180
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEID 296
DDPLRVLR+IRF ARF+F LDEEL+ A++D VKAA KI+RER+ E++
Sbjct: 181 DDPLRVLRSIRFAARFNFELDEELECVASADSVKAAFETKITRERISQEVE 231
>gi|328773569|gb|EGF83606.1| hypothetical protein BATDEDRAFT_86022 [Batrachochytrium
dendrobatidis JAM81]
Length = 544
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/381 (40%), Positives = 213/381 (55%), Gaps = 33/381 (8%)
Query: 59 PRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLET------VLRVAGGWVRDKLLGKDC 112
PRP + LT+TE++I L T H + VLRVAGGWVRDKLLG+
Sbjct: 19 PRPAT------LLLTETESQILQLLSETATHIHANNPDQPPLVLRVAGGWVRDKLLGRTS 72
Query: 113 YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWID 172
DIDIA+D M G FA + EY+ + + + + I NPD+SKHLETAT+++ +D
Sbjct: 73 DDIDIAIDTMKGEPFARHLKEYMLSKSMSLGTIY-TIQVNPDRSKHLETATVRVLGRDLD 131
Query: 173 FVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHG 232
FV+LR E Y ENSR P + FGT +DA RRD+TIN+LFYN+NT VED+TG G+ DL G
Sbjct: 132 FVHLRTEIYDENSRNPIVEFGTPLQDALRRDITINTLFYNLNTREVEDMTGHGLDDLSAG 191
Query: 233 KIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVG 292
I TPL P +TF+DDPLRVLR IRF RF + + + KAA+ D +K A KISRER+G
Sbjct: 192 LIRTPLEPLSTFVDDPLRVLRVIRFATRFGYEIVSNILKAASDDLIKTAFIKKISRERIG 251
Query: 293 TEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQL 352
E++ M+ G PV+A+ + + + +VF P P + + + A + L +
Sbjct: 252 VELNKMLEGPDPVRAIKILQDIEFYPLVFLAP----PNICQETVVHEKYAYVANYILKLM 307
Query: 353 IGSSTFND-----------DQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKR 401
I + D R L AA LP++ T++ K K I VV + S++
Sbjct: 308 IQKGILAEMGISQIPLSLQDSRNL-HLAATVLPYQGLTFR-LKNKYISVVRHVVGTSIRL 365
Query: 402 KASDAETVMNIHRVLEKFLSL 422
D +T H +L+ L +
Sbjct: 366 SKHDGDTA---HALLDSSLHI 383
>gi|67624801|ref|XP_668683.1| tRNA adenylyltransferase -related [Cryptosporidium hominis TU502]
gi|54659898|gb|EAL38459.1| tRNA adenylyltransferase -related [Cryptosporidium hominis]
Length = 533
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 170/462 (36%), Positives = 228/462 (49%), Gaps = 64/462 (13%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLL---------GKD-CYD----- 114
IEL + E ++F L+ + NL+T++RVAGGWVRDK+L KD C D
Sbjct: 36 IELNEAENELFKLLIEYTKSSNLKTIVRVAGGWVRDKILRFIYLNSAKNKDSCVDNDEEQ 95
Query: 115 -------IDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLY 167
IDIALDN+ G +FA +L + G+I +PD+SKHLETAT+
Sbjct: 96 ASTFKKDIDIALDNISGKDFAIGFNRWLQSHHNYPAHNVGIINRDPDKSKHLETATLAWN 155
Query: 168 DLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIA 227
++ IDFV LR E Y+ SRIP + GTAEEDA+RRD TINS+FYN+N +EDLT +GI
Sbjct: 156 EISIDFVGLRSETYTLESRIPIITLGTAEEDAFRRDFTINSMFYNLNERKIEDLTCKGIE 215
Query: 228 DLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKIS 287
DL +G I TPL P TF+DDPLR LRA RF +R F +DEEL A + AL KIS
Sbjct: 216 DLYNGIIRTPLDPMKTFIDDPLRALRAFRFTSRLHFRVDEELLSACKDKSIHDALQTKIS 275
Query: 288 RERVGTEIDLMVSG---NQPVKAMTHICGLTLFWIVFKLP-LQVEPEVLEGCEMFC---- 339
RERVGTE+ M+S P + I L VFK P +V + E C
Sbjct: 276 RERVGTEVHEMISNKYTGNPAIGLRLIINSNLVDSVFKFPDNEVIYSFINDSEYHCFSNF 335
Query: 340 --------------------------TAYLDAAWDLTQL--IGSSTFNDDQRR--LSQYA 369
+ L+ ++D +L I + D + +S Y
Sbjct: 336 GDWYSPGPYLVELTHRIIEILTSKNLSGCLNNSFDYKKLDIIRKLLYIDHESNWGVSTYF 395
Query: 370 ALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVS- 428
+ LP + YK+ K K+IP+V Y +SLK A +VM + L K + + L S
Sbjct: 396 SFLLPLSHHYYKNEKNKEIPLVKYIISNSLKLSNKIANSVMQLFDSLLKIIHRVVKLDSL 455
Query: 429 ---AEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFW 467
A + K VDV L+ + EI F+
Sbjct: 456 NELANSTLAENSNRDKLKVDVYSKDFLKSIGDSFFPEIWNFY 497
>gi|320584040|gb|EFW98252.1| tRNA nucleotidyltransferase [Ogataea parapolymorpha DL-1]
Length = 508
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/250 (50%), Positives = 162/250 (64%), Gaps = 10/250 (4%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETV--------LRVAGGWVRDKLLGKDCYDIDIALD 120
+I L ET+I + L R+FN LR+ GGWVRDKLLG++ +DIDI +D
Sbjct: 17 QIHLNKVETQIVNLLNEYTRYFNEHKTSATQQPLELRITGGWVRDKLLGRESHDIDIGID 76
Query: 121 NMMGSEFATKVAEYLSAT--GETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
++ G EF T++ EY+ A G++ SG I NP++SKHLET T KL+ IDFVNLR
Sbjct: 77 HLSGVEFVTQLQEYIKAQNGGQSVDSGIYKIEKNPEKSKHLETCTTKLFGFSIDFVNLRS 136
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E+SRIP + GTAEEDA+RRD T+NSLFYN+ T VED TGRG+ DL G + TPL
Sbjct: 137 EKYAEDSRIPEIEVGTAEEDAFRRDATLNSLFYNLTTGKVEDFTGRGLQDLHDGILRTPL 196
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P+ TFLDDPLR LR IRF + ++F +DE A DE+K L KISRER+ E +
Sbjct: 197 DPRKTFLDDPLRCLRLIRFASTYNFRIDELALAAMREDEIKQKLREKISRERINVEFKKI 256
Query: 299 VSGNQPVKAM 308
+ G PV +
Sbjct: 257 IMGKNPVYGL 266
>gi|66359190|ref|XP_626773.1| Cca1p, tRNA adenylyltransferase [Cryptosporidium parvum Iowa II]
gi|46228193|gb|EAK89092.1| Cca1p, tRNA adenylyltransferase [Cryptosporidium parvum Iowa II]
Length = 673
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 168/462 (36%), Positives = 228/462 (49%), Gaps = 64/462 (13%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLL---------GKDCY------- 113
+EL + E ++F L+ + NL+T++RVAGGWVRDK+L KD
Sbjct: 36 VELNEAENELFKLLIEYTKSSNLKTIVRVAGGWVRDKILRFIYLNSAKNKDSCADNDEEQ 95
Query: 114 ------DIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLY 167
DIDIALDN+ G +FA +L + G+I +PD+SKHLETAT+
Sbjct: 96 ASTFKKDIDIALDNISGKDFAIGFNRWLQSHHNYPAHNVGIINRDPDKSKHLETATLAWN 155
Query: 168 DLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIA 227
++ IDFV LR E Y+ SRIP + GTAEEDA+RRD TINS+FYN+N +EDLT +GI
Sbjct: 156 EISIDFVGLRSETYTLESRIPIITLGTAEEDAFRRDFTINSMFYNLNERKIEDLTCKGIE 215
Query: 228 DLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKIS 287
DL +G I TPL P TF+DDPLR LRA RF +R F +DEEL A + AL AKIS
Sbjct: 216 DLYNGIIRTPLDPMKTFIDDPLRALRAFRFTSRLHFRVDEELLSACKDKSIHDALQAKIS 275
Query: 288 RERVGTEIDLMVSG---NQPVKAMTHICGLTLFWIVFKLP-LQVEPEVLEGCEMFC---- 339
RERVGTE+ M+S P + I L VFK P +V + E C
Sbjct: 276 RERVGTEVHEMISNKYTGNPAIGLRLIINSNLVDSVFKFPDNEVIYSFINDSEYHCFSNF 335
Query: 340 --------------------------TAYLDAAWDLTQL--IGSSTFNDDQRR--LSQYA 369
+ L+ ++D +L I + D + +S Y
Sbjct: 336 GDWYSPGPYLVELTHRIIEILTSNNLSGCLNNSFDYKKLDIIRKLLYIDQESNWGVSTYF 395
Query: 370 ALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVS- 428
+ LP + +K+ K K+IP+V Y +SLK A +VM + L K + + L S
Sbjct: 396 SFLLPLFHHYFKNEKNKEIPLVKYIISNSLKLSNKIANSVMQLFDSLLKIIHRVVKLDSL 455
Query: 429 ---AEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFW 467
A + K VDV L+ + EI F+
Sbjct: 456 NELANSTLAENSNRDKLKVDVYSKDFLKSIGDSFFPEIWNFY 497
>gi|50549773|ref|XP_502358.1| YALI0D03267p [Yarrowia lipolytica]
gi|49648226|emb|CAG80546.1| YALI0D03267p [Yarrowia lipolytica CLIB122]
Length = 495
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/265 (50%), Positives = 175/265 (66%), Gaps = 10/265 (3%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLET------VLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
I+L DTE ++ L+ R ++ + LR GGWVRDKLLG++ DIDIA++++
Sbjct: 4 IQLNDTERQLSDLLVKFGRDWDAKNGGSDPLTLRFTGGWVRDKLLGQNSNDIDIAINSLT 63
Query: 124 GSEFATKVAEYLSATGETAPSGF---GVIPSNPDQSKHLETATMKLYDLWIDFVNLRCED 180
G+EF ++ ++SA + P I NPD+SKHLETAT L+ L +DFVNLR E+
Sbjct: 64 GAEFVDQLHAWISANPGSYPDELRSKHTIKLNPDKSKHLETATTNLFGLDVDFVNLRSEE 123
Query: 181 YSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPP 240
YS+ SR+P ++FGTAE+DAYRRD T+N+LFYN+ VEDLTGRG+ADL+ G + TPL P
Sbjct: 124 YSDESRVPVVQFGTAEQDAYRRDATLNALFYNLQEKKVEDLTGRGLADLEEGILRTPLAP 183
Query: 241 KATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDE-VKAALAAKISRERVGTEIDLMV 299
K TF DDPLRVLR IRF ARF+F L E +A S E +K AL KISRERVG E+D M
Sbjct: 184 KQTFKDDPLRVLRLIRFAARFNFQLAPEAIEAIVSGEDIKHALETKISRERVGIELDKMF 243
Query: 300 SGNQPVKAMTHICGLTLFWIVFKLP 324
SG P + I L L +F LP
Sbjct: 244 SGPCPEYGLRLIAKLGLEHEIFGLP 268
>gi|294657679|ref|XP_459981.2| DEHA2E15576p [Debaryomyces hansenii CBS767]
gi|199432870|emb|CAG88230.2| DEHA2E15576p [Debaryomyces hansenii CBS767]
Length = 577
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/262 (48%), Positives = 175/262 (66%), Gaps = 15/262 (5%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFN------LETVLRVAGGWVRDKLLGKDCYDIDIAL 119
+ I L DTE KI + L++ H+N E VLR+ GGWVRDKLLG D D+DIA+
Sbjct: 38 IHSSISLNDTELKIRNLLVDFCEHYNSNCEPNKELVLRITGGWVRDKLLGNDSNDLDIAI 97
Query: 120 DNMMGSEFATKVAEYLSATGETAPS----GFGVIPSNPDQSKHLETATMKLYDLWIDFVN 175
+++ G EFA+++ YL + PS I NP++SKHLET T KL+ L IDFVN
Sbjct: 98 NHLSGEEFASRLHSYLD---QYHPSLTLKAIHTIKKNPEKSKHLETCTTKLFGLDIDFVN 154
Query: 176 LRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIV 235
LR E+Y+ +SR+P + GTAEEDA RRD T+N+LFYNIN +ED TG+G+ DL++G +
Sbjct: 155 LRSEEYTTDSRVPIIECGTAEEDALRRDATLNALFYNINQGVIEDFTGKGLDDLRNGILR 214
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
TPL P TFLDDPLRVLR IRF +RF+F+++ E ++ +DE+K+ L KISRER+G E+
Sbjct: 215 TPLQPLQTFLDDPLRVLRLIRFASRFNFLVESETLESMTNDEIKSTLVHKISRERIGVEV 274
Query: 296 DLMVSGNQPVKAMTHI--CGLT 315
+ +++ P + I GLT
Sbjct: 275 EKILTSKNPEYGLHLINYVGLT 296
>gi|403216747|emb|CCK71243.1| hypothetical protein KNAG_0G01860 [Kazachstania naganishii CBS
8797]
Length = 566
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 242/479 (50%), Gaps = 61/479 (12%)
Query: 61 PVVVQVRDKIELTDTETKIFSCLLNTLRHFNLET-----VLRVAGGWVRDKLLGKDCYDI 115
P+ +V K+ L TE +I + L + +N + VLR+ GGWVRDKLLG+ +D+
Sbjct: 42 PLRARVPPKLILNKTEHEICNLLKDYCNRYNSKHADDPLVLRITGGWVRDKLLGQGSHDL 101
Query: 116 DIALDNMMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWID 172
DIA++NM G FA + +YL+ A P I NP++SKHLETAT KL+ + +D
Sbjct: 102 DIAINNMSGESFAQGLNQYLTENYAKYGVKPHSVHKIDKNPEKSKHLETATTKLFGVEVD 161
Query: 173 FVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHG 232
FVNLR E+Y+E SRIP + FGT EEDA RRD T+N+LFYNI T ++ED T RG+ DL+ G
Sbjct: 162 FVNLRSEEYTELSRIPVVNFGTPEEDALRRDATLNALFYNIQTENIEDFTKRGLQDLQDG 221
Query: 233 KIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVG 292
+ TPLPP+ TFLDDPLRVLR IRF +RF F + ++ K A E+ A +KISRERVG
Sbjct: 222 VLRTPLPPRKTFLDDPLRVLRLIRFASRFKFTIQPDVLKEMADAEINNAFYSKISRERVG 281
Query: 293 TEIDLMVSGNQPVKAM-----THICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAW 347
E++ ++ G P+ TH+ + FW ++ L+ Y D
Sbjct: 282 VEMEKILLGPNPLIGWELIQRTHLENVIFFWHCTDSVIEHNRNHLKSMNEIDAIYKDGKL 341
Query: 348 D--LTQLIGS--------STFNDDQRRLSQYAALFL------PFRNTTY----KDNKGKK 387
+ + Q I + N ++ + + F PF+ K
Sbjct: 342 NKHMKQFIEQYHTMLDLIPSLNTKIQQDANFKQNFFLASSLTPFKEFDIVAFPKKKMNNT 401
Query: 388 IPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLI------PSLVSAEDV----KVNDG 437
IP V RD LK SDA V + ++ ++ P+ +S D+ + G
Sbjct: 402 IPFVEAVVRDGLKIAKSDAVIVSQAVAAIAQYSHMVTKYTLNPNSISRSDIGLFMRTFKG 461
Query: 438 QWS--------KELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLLYPTHVDHTEDM 488
W E ++ +KLR ++ E F+ ++++ H+D+ D+
Sbjct: 462 HWELAHYVALVTEYLEADGITKLR---ANIISEYNNFF-------SIIHAEHLDNCHDL 510
>gi|353235438|emb|CCA67451.1| related to tRNA nucleotidyltransferase [Piriformospora indica DSM
11827]
Length = 561
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 169/456 (37%), Positives = 231/456 (50%), Gaps = 55/456 (12%)
Query: 46 FLRCKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRD 105
L + ++S ++P P+ V + + E F LN R+AGGWVRD
Sbjct: 20 MLSTRPSISRRKPLEPLEVHLTPQEENVCRLIDEFCQTLNQDVTDGEPVACRIAGGWVRD 79
Query: 106 KLLGKDCYDIDIALDNMMGSEFATKV--AEYLSATGETAPSGFGVIPSNPDQSKHLETAT 163
KLLG + +D+DIA++ M G FA K+ A + + G T I NPDQSKHL T
Sbjct: 80 KLLGIESHDVDIAINTMTGEAFAQKLLDAGKVDSIGTT-------IAVNPDQSKHLATTR 132
Query: 164 MKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG 223
+K++D W+D VNLR E Y+ SRIPT+ FGT +EDA RRDLTIN++FYNI++ VED TG
Sbjct: 133 LKIHDFWVDLVNLRSETYTGESRIPTIEFGTPQEDADRRDLTINAMFYNIHSRKVEDFTG 192
Query: 224 RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALA 283
RGI DLK G + TPL K TF DDPLR+LR +RF +R + ++E + AA ++ AL
Sbjct: 193 RGIDDLKAGIVRTPLEAKTTFEDDPLRILRCVRFASRLGYTVEESIAAAAKDPTIQKALD 252
Query: 284 AKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYL 343
KISRER+G EID M+ G PV M + L IV + P G + L
Sbjct: 253 NKISRERIGEEIDKMIQGPDPVYGMELLHSFGLLPIVLR-PTAQASSTSSGAPLSMDYAL 311
Query: 344 -------------DAAWDLTQLIGSSTF--NDDQRRLSQYAALFLPFRNTTYKDNKGKKI 388
+ + L+ SST + Q RL + A++ PFR T++ K K I
Sbjct: 312 RGIIIIELLLRSEEHLPGVHPLLLSSTLETHSTQARL-RIASILTPFRGLTFEQKK-KSI 369
Query: 389 PVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLV-SAEDVKVNDGQWSKELVDVP 447
P+V+ RD LK + +L IP L SAE + +E
Sbjct: 370 PLVDSVIRDGLKLGGRN------------HYLDGIPHLFRSAELI--------REAFSTT 409
Query: 448 DASKLRVLTGFLLRE-------IKKFWRVALLISTL 476
A++ R G LLR I W+ + L S L
Sbjct: 410 FATESRAEIGMLLRHPSIHNPIIGSEWKSSALFSLL 445
>gi|366990343|ref|XP_003674939.1| hypothetical protein NCAS_0B04830 [Naumovozyma castellii CBS 4309]
gi|342300803|emb|CCC68567.1| hypothetical protein NCAS_0B04830 [Naumovozyma castellii CBS 4309]
Length = 543
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 177/282 (62%), Gaps = 22/282 (7%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETV-------LRVAGGWVRDKLLGKDCYDIDIALDNM 122
I+LT E I L + H+N + LR+ GGWVRDKLLG+ +D+DIA++ M
Sbjct: 26 IKLTPIEKDICKLLNDYTLHYNQTHLDIKEPLTLRITGGWVRDKLLGQGSHDLDIAINIM 85
Query: 123 MGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCE 179
G FA + EYL+ A P I NP++SKHLETAT KL+D+ +DFVNLR E
Sbjct: 86 SGESFARGLNEYLTKHYARYGIKPHSIHKIDKNPEKSKHLETATTKLFDIEVDFVNLRAE 145
Query: 180 DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP 239
+Y+E SRIP +FGT EEDA RRD T+N+LFYNI + +ED T +G+ DLK+G + TPLP
Sbjct: 146 EYTELSRIPITKFGTPEEDALRRDATLNALFYNIQENQIEDFTRKGLTDLKNGILRTPLP 205
Query: 240 PKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
+ TFLDDPLRVLR IRF +RF+F +++ + K ++ E+ AA KISRERVG E++ ++
Sbjct: 206 ARKTFLDDPLRVLRLIRFASRFNFTIEDNVLKEMSNPEINAAFITKISRERVGNEMEKIL 265
Query: 300 SGNQPVKAMT-----HICGLTLFWIVFKLPLQVEPEVLEGCE 336
GN P+ ++ H+ FW +P ++E E
Sbjct: 266 IGNNPILGLSLIQQAHLENAIFFW-------HNDPSIIECNE 300
>gi|410076208|ref|XP_003955686.1| hypothetical protein KAFR_0B02540 [Kazachstania africana CBS 2517]
gi|372462269|emb|CCF56551.1| hypothetical protein KAFR_0B02540 [Kazachstania africana CBS 2517]
Length = 539
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 177/266 (66%), Gaps = 17/266 (6%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETV---------LRVAGGWVRDKLLGKDCYDIDIALD 120
I+LT+TE+KI + L + + ++N + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 17 IQLTETESKICNLLKDYVHYYNSTSAYDPSIDPLTLRITGGWVRDKLLGQGSHDLDIAIN 76
Query: 121 NMMGSEFATKVAEYL-SATGETA--PSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLR 177
M G EFA + EYL G+ P I NP++SKHLETAT KL+ + IDFVNLR
Sbjct: 77 IMTGEEFARGLNEYLLENYGKYGIKPHSIHKIDKNPEKSKHLETATTKLFGVEIDFVNLR 136
Query: 178 CEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTP 237
E+Y+E SRIP + FGT E+DA RRD T+N+LFYNI + +ED T RG+ DLK G + TP
Sbjct: 137 SEEYTETSRIPIVNFGTPEQDALRRDATLNALFYNIASDQIEDYTHRGLKDLKEGVLKTP 196
Query: 238 LPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDL 297
LPP+ TFLDDPLRVLR IRF +RF+F +D E+ E+ + +KISRER+G E++
Sbjct: 197 LPPRQTFLDDPLRVLRLIRFASRFNFKIDNEVLFEMNDPEINLSFNSKISRERIGVEMEK 256
Query: 298 MVSGNQPVKAM-----THICGLTLFW 318
+++G+ P+ A+ +++ + FW
Sbjct: 257 ILNGSNPLIALKLIQISNLENVIFFW 282
>gi|426201673|gb|EKV51596.1| hypothetical protein AGABI2DRAFT_176078, partial [Agaricus bisporus
var. bisporus H97]
Length = 322
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 128/258 (49%), Positives = 172/258 (66%), Gaps = 8/258 (3%)
Query: 70 IELTDTETKIFSCL----LNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
I LT+ E ++ L N ++ TV R+AGGWVRDKLLG +C+DIDIAL N MG
Sbjct: 19 IRLTEDEDRVCQLLDDYVKNAQEDVSMRTVCRIAGGWVRDKLLGSECHDIDIALSNSMGF 78
Query: 126 EFATKVAEYLSATG-ETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSEN 184
FA +A Y + G ET I NP+QSKHLETAT K++ L +D VNLRCE+Y+ +
Sbjct: 79 TFAEGLAAYAARNGVETGT--ISKIAQNPEQSKHLETATFKVFGLEVDIVNLRCEEYASD 136
Query: 185 SRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKAT 243
SRIPT + FGT +DA RRD+TIN+LFYN+++ VED TG+G DL+ G + TPLPP+ T
Sbjct: 137 SRIPTGVSFGTPLQDALRRDITINALFYNVHSREVEDFTGKGRDDLESGIVRTPLPPRET 196
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
FLDDPLRVLR IRF +R F EL++AA ++ A+ K++RERVG E+ M+ G
Sbjct: 197 FLDDPLRVLRCIRFASRLGFRTVPELEEAAKDPLIQKAIVNKVARERVGEELVKMMRGRD 256
Query: 304 PVKAMTHICGLTLFWIVF 321
P +++ I L+L+ +F
Sbjct: 257 PTRSIELIYNLSLYPAIF 274
>gi|254567906|ref|XP_002491063.1| ATP (CTP):tRNA-specific tRNA nucleotidyltransferase [Komagataella
pastoris GS115]
gi|238030860|emb|CAY68783.1| ATP (CTP):tRNA-specific tRNA nucleotidyltransferase [Komagataella
pastoris GS115]
gi|328352411|emb|CCA38810.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Komagataella
pastoris CBS 7435]
Length = 520
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 221/420 (52%), Gaps = 51/420 (12%)
Query: 70 IELTDTETKIFSCLLNTLRHFNL--------ETVLRVAGGWVRDKLLGKDCYDIDIALDN 121
I+L D E++I S L H+N + LR+ GGWVRDKLLG+ +DIDIA++
Sbjct: 15 IKLDDKESQICSLLKYFCNHYNTKLRKPNEPDLQLRITGGWVRDKLLGRSSHDIDIAINT 74
Query: 122 MMGSEFATKVAEYLSATGETA-----PSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNL 176
+ G FA K+ ++ + S I NPD+SKHLET T KLY + IDFVNL
Sbjct: 75 LSGESFAEKLVSFIKENHKDEIESILSSSIHKINKNPDKSKHLETCTTKLYGIDIDFVNL 134
Query: 177 RCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVT 236
R E Y+E SRIPT+ +GT +EDA RRD T+N+LFYN+ T +ED T +G+ DLK G + T
Sbjct: 135 RNEKYTEESRIPTIDYGTPQEDALRRDATLNALFYNLTTDQIEDFTEKGLIDLKQGVLRT 194
Query: 237 PLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEID 296
PL P TFLDDPLR LR IRF + F F + E+ +A ++K AL AKISRER+G EID
Sbjct: 195 PLEPSKTFLDDPLRCLRLIRFASVFGFSVSEDALQAMKQPKIKEALNAKISRERIGVEID 254
Query: 297 LMVSGNQPVKAMTHICGLTLFWIVFKLP------LQVEPEVLEGCEMFCTAYLDAAW--- 347
++ P++ + + L +F ++ P+V E T YL +
Sbjct: 255 KILVSKDPIRGLKILRDTNLLDAIFNFGDLQDAVYELNPKVRERLNQVFTIYLPESASKI 314
Query: 348 -DLTQLIGSSTFNDDQRRL-SQ--------------YAALFLPFRNTTYKDNKGKKIPVV 391
L QLI F DD + + SQ +A L L F K+ + +V
Sbjct: 315 SSLPQLI--QQFPDDLKSVYSQLDLRVLYLNLLLYPFAQLRLKFSTKPTKNTRYATEMIV 372
Query: 392 NYTFRDSLKRKASDAETV-------MNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELV 444
RD LK + D++TV ++++ +S +P V ++ +GQW L+
Sbjct: 373 ----RDGLKYSSKDSDTVSLIVDNYQEFQHLVQRDVSTLPRSVLGMAIRKYNGQWELNLI 428
>gi|344230639|gb|EGV62524.1| hypothetical protein CANTEDRAFT_114906 [Candida tenuis ATCC 10573]
gi|344230640|gb|EGV62525.1| hypothetical protein CANTEDRAFT_114906 [Candida tenuis ATCC 10573]
Length = 536
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 233/445 (52%), Gaps = 55/445 (12%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFN-------LETVLRVAGGWVRDKLLGKDCYDIDIA 118
+ + I L +TE I + LL +N VLR+ GGWVRDKLLG + +D+D+A
Sbjct: 5 INNSIVLNETEVNIKNLLLEFCNQYNSTIQDRTRHLVLRITGGWVRDKLLGDESHDLDVA 64
Query: 119 LDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLR 177
+++M G EFA+K++ YL+ P S I SNP++SKHLET T K+YDL IDFVNLR
Sbjct: 65 INHMSGEEFASKLSLYLTKHHPDLPLSSVYKIKSNPEKSKHLETCTTKIYDLDIDFVNLR 124
Query: 178 CEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTP 237
E Y+ SRIP + +GTA+EDA RRD T+N+LFYN+N S +ED T RG+ DL+ G + TP
Sbjct: 125 SEKYTSESRIPVIEYGTAQEDALRRDATLNALFYNLNESKIEDFTNRGLQDLQDGILRTP 184
Query: 238 LPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDL 297
L P TFLDDPLRVLR +RF +R++F ++ E A E+ A+L KISRERVG E+D
Sbjct: 185 LKPLQTFLDDPLRVLRLVRFASRYNFTVETETLTAMKDPEINASLLHKISRERVGVELDK 244
Query: 298 MVSGNQPVKAMTHICGLTLFWIVF----------------------KLPLQVEPEVLEGC 335
+++ P + + + + VF +L Q+ P+V
Sbjct: 245 ILTSANPEYGLRLLNYVNITESVFNVGTISSQLSKFNSTNEIEQYGRLSQQLGPQVSAAT 304
Query: 336 EMFCT-AYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTTYK--DNKGKKIPVVN 392
+F + D +LIGS FN + + + PFR+ + + D V
Sbjct: 305 AVFPVFKSILLGSDNHRLIGS--FNTVSSKHLWLSVVLYPFRSMSLRINDKMSGIYHVPE 362
Query: 393 YTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKL 452
++ L+ D E V N+ + +L S+ ++ W+ + S+L
Sbjct: 363 IIIKEGLRFGKHDFEPVSNV----------LANLGSSSEI------WANTVAGTIARSRL 406
Query: 453 RVLTGFLLREIKKFWRVALLISTLL 477
G LR+ + V +L++ L
Sbjct: 407 ----GLYLRQFGIYGDVNILVNCFL 427
>gi|365760985|gb|EHN02663.1| Cca1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 546
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/345 (41%), Positives = 193/345 (55%), Gaps = 38/345 (11%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLET-------VLRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I + L + +N E LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQHICNLLNDYTDLYNREHQDKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+D+ +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFDVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP M FGT EEDA RRD T+N+LFYNI VED T RG+ DLK G + TPL
Sbjct: 149 EKYTELSRIPKMCFGTPEEDALRRDATLNALFYNIQKGEVEDFTRRGLRDLKDGILRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 209 PAKQTFLDDPLRVLRLIRFASRFNFSIDPEVMAEMGDPQINTAFNSKISRERVGVEMEKI 268
Query: 299 VSGNQPVKAM-----THICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLI 353
+ G P+ A+ H+ + FW + V+E E C +D ++ +
Sbjct: 269 LVGPTPLLALQLVQKAHLDNVIFFW-------HNDKSVVEFNEKNCQD-MDK---ISHIY 317
Query: 354 GSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDS 398
G + N + + +FL +K+PV+ R S
Sbjct: 318 GDNILNSHLQNFIELYPMFL------------EKLPVLREMIRQS 350
>gi|45201214|ref|NP_986784.1| AGR118Wp [Ashbya gossypii ATCC 10895]
gi|44986068|gb|AAS54608.1| AGR118Wp [Ashbya gossypii ATCC 10895]
gi|374110033|gb|AEY98938.1| FAGR118Wp [Ashbya gossypii FDAG1]
Length = 533
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 202/379 (53%), Gaps = 31/379 (8%)
Query: 97 RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
R+AGGWVRDKLLG + D+DI L+N+ G FA+ + E+L A G +A G I NP +S
Sbjct: 78 RIAGGWVRDKLLGLESEDLDIVLNNVTGERFASGLVEFLKAQGGSA-RGVHKIQRNPARS 136
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
KHLET T + + +DFVNLR E Y+E SR+PT+ FGT +DA RRD T+N+LFYNI
Sbjct: 137 KHLETCTTTVLGVAVDFVNLRSETYAEESRVPTVEFGTPLQDAMRRDATLNALFYNILEG 196
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
VED TGRG+ADL G + TP+P + TFLDDPLRVLR +RF ARF F LD E ++ A
Sbjct: 197 VVEDFTGRGLADLAAGVLRTPMPARQTFLDDPLRVLRLVRFAARFGFELDNEAREGMAYR 256
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF----KLPLQVEPEVL 332
++ AAL KISRERVGTE+ M++ P+ + +C L VF LP E VL
Sbjct: 257 DIHAALVRKISRERVGTELHKMLTSADPLYGLRLLCEAGLLPAVFLSPDGLPRGAEQHVL 316
Query: 333 E---GCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIP 389
E C A+L A + ++ ++ R + + FR K + +
Sbjct: 317 GMDYQVEALC-AHLSALKERCPGFAAALEDEAFRERFLLSTVLARFRGVHATSTKKQPVE 375
Query: 390 VVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDA 449
V R+ LK + V R ++ + ++ N G WS+ V
Sbjct: 376 AVVSIVREGLKLGRATVSAVQMAVRSIDDYHEMVE----------NYGSWSRARV----- 420
Query: 450 SKLRVLTGFLLREIKKFWR 468
G LR ++ WR
Sbjct: 421 -------GLQLRGLEDHWR 432
>gi|381351956|gb|AFG25395.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
Length = 300
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/265 (49%), Positives = 168/265 (63%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H LE + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQNICNLLNDYTDLYNQKYHNKLEPLTLRITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 149 EKYTELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 209 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 268
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 269 LVGPTPLLALQLIQRAHLENVIFFW 293
>gi|388580674|gb|EIM20987.1| hypothetical protein WALSEDRAFT_32965 [Wallemia sebi CBS 633.66]
Length = 526
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 170/281 (60%), Gaps = 7/281 (2%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETV------LRVAGGWVRDKLLGKDCYDIDIALDNMM 123
I LT++E + L E LR+AGGWVRDKLLGK DID+A+ +
Sbjct: 2 ISLTNSENHLCEILSGCTAKLRREDASLAALELRIAGGWVRDKLLGKPSDDIDVAITPLT 61
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G FA +AEYL + I +NP+QSKHLETA MK+ +DFVNLR E Y+
Sbjct: 62 GLPFAEALAEYLQSIEPQQKISIARIDANPNQSKHLETARMKVSGYEVDFVNLRSETYAT 121
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKAT 243
SRIP M GT EDA RRD+TINSLFYNI+T VED TG+G+ DLK+G + TPL P T
Sbjct: 122 GSRIPQMSLGTPLEDALRRDITINSLFYNIHTRQVEDFTGKGLEDLKNGLVRTPLEPFQT 181
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
F DDPLRVLR IRF R+ F LD + +AA D ++ + +S+ER+GTEID M++ Q
Sbjct: 182 FSDDPLRVLRCIRFATRYGFTLDNTIIEAAQRDAIRRGVCENVSKERIGTEIDKMLNSQQ 241
Query: 304 PVKAMTHICGLTLFWIVFKLPLQ-VEPEVLEGCEMFCTAYL 343
P++A+T++ L IVF + VE + LE +L
Sbjct: 242 PLEALTNLSKTKLHDIVFGVSGDGVEGDALEASYALAAGHL 282
>gi|403168873|ref|XP_003328456.2| hypothetical protein PGTG_09750 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167698|gb|EFP84037.2| hypothetical protein PGTG_09750 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 610
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 232/445 (52%), Gaps = 61/445 (13%)
Query: 32 FRNIF-TVNTTRNLGFL--RCKATMSEQEPPRPVVVQVR--------DKIELTDTETKIF 80
RN F +R +G L R +T +P + ++ R +IEL E+K+
Sbjct: 6 LRNYFDQQGLSRLMGCLKRRTTSTTDHNQPNQKRLLVSRMTMRIKKDQEIELNRAESKLC 65
Query: 81 SCLLNTLRHFNLET----------VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATK 130
L ++ H LR+AGGWVRDKLLG D+DIA+ ++ G +FAT+
Sbjct: 66 QLLNQSVSHLKASASSTNQDLNSLTLRIAGGWVRDKLLGVQSNDLDIAISSLTGQDFATR 125
Query: 131 VAEYL--------------SATGETAPSG--------FGVIPSNPDQSKHLETATMKLYD 168
+ YL T E G I + PDQSKHLETAT
Sbjct: 126 FSSYLRDQQRLKREGQSENQTTKEAGDGGEETFELGKIATIEARPDQSKHLETATTTFLG 185
Query: 169 LWIDFVNLRCEDYS-ENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGI 226
L +DFV LR E+Y ++SRIP+ +RFGT EDA RRD+TINSLFYN++T ++ED TG+G+
Sbjct: 186 LDLDFVQLRSEEYGDQDSRIPSSVRFGTPLEDALRRDITINSLFYNVHTGAIEDHTGKGL 245
Query: 227 ADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKI 286
DL+ G I TPLP + TF DDPLR+LR IRF RF F LD ++ AA S+ ++ AL KI
Sbjct: 246 EDLEVGLIRTPLPAEHTFKDDPLRLLRCIRFATRFGFRLDADIVSAATSEPIRVALKEKI 305
Query: 287 SRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAY-LDA 345
SRERVGTE+D M+ G P+ ++ I L L+ +VF P ++ E ++ TA L
Sbjct: 306 SRERVGTEVDKMLKGRDPLSSLKMIEELGLYKLVFSPPKSLKEETIDPSIAVETATCLAG 365
Query: 346 AWDLTQ--LIGSSTF-----------NDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVN 392
LT + SST N +RRL +AL P+R K K K++
Sbjct: 366 LLHLTNDSNLSSSTLPPNISKLLPRSNALKRRLFLASALS-PYRELKAKAGK-KELWAGE 423
Query: 393 YTFRDSLKRKASDAETVMNIHRVLE 417
+SLK D + N++R LE
Sbjct: 424 VVLMESLKLGNHDKSFISNLYRSLE 448
>gi|401625967|gb|EJS43939.1| cca1p [Saccharomyces arboricola H-6]
Length = 546
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 133/292 (45%), Positives = 176/292 (60%), Gaps = 20/292 (6%)
Query: 47 LRCKATMSEQEPPR-----PVVVQVRDKIELTDTETKIFSCLLNTLRHFNLET------- 94
LR A++ + P+ P+ KI LT E I + L + +N E
Sbjct: 2 LRSTASLLMKSIPQKAMTNPIFTLQAPKITLTKVEQNICNLLNDYTDSYNREHQNKSEPL 61
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS---ATGETAPSGFGVIPS 151
LR+ GGWVRDKLLG+ +D+DIA++ M G +FAT + EYL A P I
Sbjct: 62 TLRITGGWVRDKLLGQGSHDLDIAINVMSGEQFATGLNEYLQEHHAKYGAKPHNIHKIDK 121
Query: 152 NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFY 211
NP++SKHLETAT KL+ + +DFVNLR E Y+E SRIP + FGT EEDA RRD T+N+LFY
Sbjct: 122 NPEKSKHLETATTKLFGIEVDFVNLRSEKYTELSRIPKVCFGTPEEDALRRDATLNALFY 181
Query: 212 NINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
NI VED T RG+ DLK G + TPLP K TFLDDPLRVLR IRF +RF+F +D E+
Sbjct: 182 NIQEGEVEDFTRRGLRDLKDGVLRTPLPAKQTFLDDPLRVLRLIRFASRFNFAIDPEVMA 241
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM-----THICGLTLFW 318
++ +A +KISRERVG E++ ++ G P+ A+ H+ + FW
Sbjct: 242 EMGDPQINSAFNSKISRERVGVEMEKILVGPTPLLALQLIQKAHLDNVIFFW 293
>gi|50293743|ref|XP_449283.1| hypothetical protein [Candida glabrata CBS 138]
gi|51704337|sp|Q9P4S5.2|CCA1_CANGA RecName: Full=CCA tRNA nucleotidyltransferase, mitochondrial;
AltName: Full=CCA-adding enzyme; AltName: Full=tRNA
CCA-pyrophosphorylase; AltName: Full=tRNA
adenylyltransferase; AltName: Full=tRNA
nucleotidyltransferase; Flags: Precursor
gi|49528596|emb|CAG62257.1| unnamed protein product [Candida glabrata]
Length = 531
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 125/264 (47%), Positives = 170/264 (64%), Gaps = 14/264 (5%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNL------ETVLRVAGGWVRDKLLGKDCYDIDIALDNM 122
+I+LT+ ET+I + L + H+N LR+ GGWVRDKLLG+ +D+DIA++ M
Sbjct: 14 RIQLTEKETRICNLLKDYTAHYNSLHYGQEPLTLRITGGWVRDKLLGQGSHDLDIAINIM 73
Query: 123 MGSEFATKVAEYLSATGE---TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCE 179
G EFAT + YL + P I NP++SKHLETAT KL+D+ +DFVNLR E
Sbjct: 74 SGEEFATGLNGYLLEHFDKYGVKPHSIHKIDKNPEKSKHLETATTKLFDVEVDFVNLRSE 133
Query: 180 DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP 239
+Y+E+SRIPT +FGT EEDA RRD T+N+LFYNI +VED T RG DL+ G + TPLP
Sbjct: 134 EYTEDSRIPTTQFGTPEEDALRRDATLNALFYNIQQDAVEDFTKRGWQDLQDGVLRTPLP 193
Query: 240 PKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
+ TFLDDPLRVLR IRF +RF+F ++ + K E+ A KISRER+G E++ ++
Sbjct: 194 ARQTFLDDPLRVLRLIRFASRFNFNIEAGVLKEMHDPEINEAFNNKISRERIGVEMEKIL 253
Query: 300 SGNQPVKAM-----THICGLTLFW 318
G P+ + TH+ + W
Sbjct: 254 VGPNPILGLKLIQRTHLENVIFLW 277
>gi|406605467|emb|CCH43111.1| hypothetical protein BN7_2658 [Wickerhamomyces ciferrii]
Length = 511
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 126/270 (46%), Positives = 174/270 (64%), Gaps = 9/270 (3%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFNLET-----VLRVAGGWVRDKLLGKDCYDIDIALD 120
V KI+L +TETKI L + +N +T LR+ GGWVRDKLLG + D+DIA++
Sbjct: 10 VNPKIQLNETETKISELLKDFTSKYNSKTGGEDLELRITGGWVRDKLLGDESNDLDIAIN 69
Query: 121 NMMGSEFATKVAEYLSATGET---APSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLR 177
+ G EFA + ++L +T +P+ I NP++SKHLETAT KLY L +DFVNLR
Sbjct: 70 KLSGEEFAEALKQFLVDNFDTYQLSPTNIHKIEKNPEKSKHLETATTKLYGLDVDFVNLR 129
Query: 178 CEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTP 237
E+Y+E SRIP +++GT +EDA RRD T+N+LFYNI VEDLT +G+ DL+ G + TP
Sbjct: 130 SEEYTEESRIPIIKYGTPQEDALRRDATLNALFYNIQKDEVEDLTTKGLQDLEKGLLRTP 189
Query: 238 LPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDL 297
L P TFLDDPLRVLR IRF +RF F ++++ ++ +K AL KISRER+G E++
Sbjct: 190 LEPLKTFLDDPLRVLRLIRFASRFHFTIEKDTYESMKQLSIKEALIHKISRERIGVEVEK 249
Query: 298 MVSGNQPVKAMTHICGLTLFWIVFKL-PLQ 326
+S P+ + + L +F PLQ
Sbjct: 250 TLSSKDPIYGLELLTDAQLLDTIFNFGPLQ 279
>gi|260943263|ref|XP_002615930.1| hypothetical protein CLUG_04812 [Clavispora lusitaniae ATCC 42720]
gi|238851220|gb|EEQ40684.1| hypothetical protein CLUG_04812 [Clavispora lusitaniae ATCC 42720]
Length = 575
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 128/269 (47%), Positives = 181/269 (67%), Gaps = 13/269 (4%)
Query: 59 PRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETV------LRVAGGWVRDKLLGKDC 112
P+ V V++ +EL +TE KI + L++ +N + LR+ GGWVRDKLLGK+
Sbjct: 28 PKMVKRLVKNTVELNETEKKIKNLLVSFCDEYNQQVKPEDRLELRITGGWVRDKLLGKES 87
Query: 113 YDIDIALDNMMGSEFATKVAEYLSATG---ETAPSGFGVIPSNPDQSKHLETATMKLYDL 169
D+DIA++ + G +FA+K+ EY G + I NP++SKHLET T KL+ L
Sbjct: 88 NDLDIAINLLSGQDFASKLLEYSQQKGMDLGKNATSLHTIKKNPEKSKHLETCTTKLFGL 147
Query: 170 WIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADL 229
IDFVNLR E Y+E+SR+P + GTAEEDA RRD T+N+LFYN+N S +ED TG+G+ADL
Sbjct: 148 DIDFVNLRNEQYTEDSRVPVIECGTAEEDALRRDATLNALFYNLNKSEIEDFTGKGLADL 207
Query: 230 KHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRE 289
++G + TPL P +TF+DDPLRVLR IRF RF+F ++ ++ +++K AL KISRE
Sbjct: 208 ENGILRTPLQPLSTFVDDPLRVLRLIRFACRFNFQIESSTLESMKDEKIKTALIHKISRE 267
Query: 290 RVGTEID-LMVSGNQP--VKAMTHICGLT 315
RVG E+D ++ S N P ++ + H+ GLT
Sbjct: 268 RVGVEMDKILTSDNVPYGLRLLNHL-GLT 295
>gi|219113865|ref|XP_002186516.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583366|gb|ACI65986.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 729
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 174/429 (40%), Positives = 222/429 (51%), Gaps = 76/429 (17%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLG-------------------- 109
I+LT+ E +F+ L L+T LRVAGGWVRDKLL
Sbjct: 104 IQLTEEERALFTLLRQVRSETKLDTTLRVAGGWVRDKLLATPEFQTYHKVLDVGSQRLTS 163
Query: 110 ----------------------KDCY--DIDIALDNMMGSEFATKVAEYLSATGETAPSG 145
KD DIDIALD+M+G EFA ++ EYLS G+ +
Sbjct: 164 KFQKPSAPSMGRQGTKVLVNTDKDAQPVDIDIALDDMLGREFADRLNEYLSMEGQDTIA- 222
Query: 146 FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRFGTAEEDAYRRDL 204
GV+ NP++SKHLETATMK+ WIDFVNLR E+Y++ SRIP MR GTA EDA+RRDL
Sbjct: 223 VGVVLKNPEKSKHLETATMKVGSFWIDFVNLRAEEYTQASRIPDLMRIGTAAEDAFRRDL 282
Query: 205 TINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFI 264
TIN+LFYN+N+ VED TGRG DL+ G + TPLPP T LDDPLR LR++RF AR F
Sbjct: 283 TINALFYNVNSGQVEDWTGRGFDDLRKGVVATPLPPLTTLLDDPLRALRSVRFAARLRFT 342
Query: 265 LDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
+D+EL AA V+ ALA K+SRERVG E+DLM+ PV AM + L L VF +
Sbjct: 343 MDDELVAAAKDKSVRNALAQKVSRERVGGELDLMLRSPDPVGAMRLLINLRLIDTVFPIE 402
Query: 325 LQVEPEVL--------EGCEMFCTAY---LDAAWDLTQLIGSSTF-----------NDDQ 362
+ P+ +G E+ T++ D W +S +++
Sbjct: 403 HYLAPDKTTSTATLFDKGLELLSTSHDHLADCRWSPPLWCKNSRAAFGAVEHRLLQDEEA 462
Query: 363 RRLSQYAALF------LPFRNTTYKDNKGKKI--PVVNYTFRDSLKRKASDAETVMNIHR 414
RRL YAA P R + G+K V D LKR DAE V I +
Sbjct: 463 RRLLWYAAFLKPIHDRTPVRQASNPKLTGRKANRSAVAKLLVDKLKRPTRDAEAVERIIK 522
Query: 415 VLEKFLSLI 423
F L+
Sbjct: 523 ASTDFTQLV 531
>gi|348683496|gb|EGZ23311.1| hypothetical protein PHYSODRAFT_310724 [Phytophthora sojae]
Length = 596
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 126/255 (49%), Positives = 165/255 (64%), Gaps = 2/255 (0%)
Query: 68 DKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEF 127
+ I+LT E +FS L + T LRVAGGWVRDKL G DIDIALDNMMG++F
Sbjct: 49 NAIQLTAAEDSLFSFLEYIQTLYTPSTRLRVAGGWVRDKLRGAQSEDIDIALDNMMGAKF 108
Query: 128 ATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRI 187
A + ++ PS GV+ +N D+SKHLE AT+ + +D V+LR E+Y+++SR+
Sbjct: 109 ARYITKF-QRDRNLPPSSVGVVKANSDKSKHLEVATVTIESSTVDLVHLRAEEYTQDSRV 167
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDD 247
P +RF T E+DA RRDLTIN+LFYN++T VED TG+G+ DLK G I TP P TFLDD
Sbjct: 168 PDVRFATPEDDASRRDLTINALFYNLHTREVEDFTGKGVEDLKAGVIRTPKEPVQTFLDD 227
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASD-EVKAALAAKISRERVGTEIDLMVSGNQPVK 306
PLRVLRA+RF F F LD LK+A E+ A+ K+SRER+G E+ M+SG P +
Sbjct: 228 PLRVLRALRFACEFGFELDPALKRAVLEQREIVGAMRRKVSRERIGIEVRKMLSGKDPAR 287
Query: 307 AMTHICGLTLFWIVF 321
A + L +VF
Sbjct: 288 AFGFLRQFDLLELVF 302
>gi|401839586|gb|EJT42745.1| CCA1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 350
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/265 (49%), Positives = 166/265 (62%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLET-------VLRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I + L + +N E LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 12 KITLTKVEQHICNLLNDYTDLYNREHQDKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 71
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+D+ +DFVNLR
Sbjct: 72 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFDVEVDFVNLRS 131
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP M FGT EEDA RRD T+N+LFYNI VED T RG+ DLK G + TPL
Sbjct: 132 EKYTELSRIPKMCFGTPEEDALRRDATLNALFYNIQKGEVEDFTRRGLRDLKDGILRTPL 191
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 192 PAKQTFLDDPLRVLRLIRFASRFNFSIDPEVMAEMGDPQINTAFNSKISRERVGVEMEKI 251
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 252 LVGPTPLLALQLVQKAHLDNVIFFW 276
>gi|392597068|gb|EIW86390.1| hypothetical protein CONPUDRAFT_46921 [Coniophora puteana
RWD-64-598 SS2]
Length = 347
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 161/246 (65%), Gaps = 5/246 (2%)
Query: 62 VVVQVRDKIELTDTETKIFS----CLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDI 117
+ VR KIELTD+E ++ + C L T R+AGGWVRDKLLG DIDI
Sbjct: 5 IAPHVRQKIELTDSEDQLCTLLDECTTYLKSEHGLSTSCRIAGGWVRDKLLGLQSNDIDI 64
Query: 118 ALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLR 177
L++MMG FA + + S + I SNPDQSKHLETA L+D+ +DFVNLR
Sbjct: 65 CLEDMMGVPFAERFVSFASERKSIPVNKITKIESNPDQSKHLETARTTLFDIELDFVNLR 124
Query: 178 CEDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVT 236
E+Y+ +SRIPT + FGT +DA RRDLTIN+LFYN++T VED T +G+ADL+ G + T
Sbjct: 125 SEEYASDSRIPTQVTFGTPLQDALRRDLTINTLFYNVHTRQVEDHTEKGLADLRRGIVRT 184
Query: 237 PLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEID 296
PLPP TF DD LRV+R IRF +R F + EL+ AA EV+A LA KISRERVG E+D
Sbjct: 185 PLPPLETFRDDELRVIRCIRFASRLGFEMVTELQDAARDAEVQAGLAKKISRERVGEELD 244
Query: 297 LMVSGN 302
M+ G
Sbjct: 245 KMLKGE 250
>gi|150864973|ref|XP_001384007.2| hypothetical protein PICST_31221 [Scheffersomyces stipitis CBS
6054]
gi|149386229|gb|ABN65978.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 559
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/379 (38%), Positives = 211/379 (55%), Gaps = 35/379 (9%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRH--------FNLETVLRVAGGWVRDKLLGKDCYDIDI 117
++ I L++TE KI + L++ RH F LE LR+ GGWVRDKLLG DIDI
Sbjct: 5 IQTTITLSETEAKIQNLLVDYCRHHSETYPNKFPLE--LRITGGWVRDKLLGNHSNDIDI 62
Query: 118 ALDNMMGSEFATKVAEYLSATG-ETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNL 176
A+++ G +FA+ + EYL E I NP++SKHLET T KL+ + IDFVNL
Sbjct: 63 AVNHQSGEQFASNLHEYLRVHNPELHLKAIHTIKKNPEKSKHLETCTTKLFGMDIDFVNL 122
Query: 177 RCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVT 236
R E+YS++SR+P ++FGT EEDAYRRD T+NSLF+N+N + +ED TG+G+ DL+ G + T
Sbjct: 123 RSEEYSDDSRVPIIKFGTPEEDAYRRDATLNSLFFNLNKNEIEDFTGKGLQDLQDGVLRT 182
Query: 237 PLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEID 296
PL P TFLDDPLRVLR IRF +RF+FI++ + +A S E++ +L KIS+ER+ E+
Sbjct: 183 PLEPLQTFLDDPLRVLRLIRFASRFNFIVEPKTLEAMTSPEIRESLTTKISKERIEVELL 242
Query: 297 LMVSGNQPVKAMTHICGLTLFWIVFKLPLQV--EPEVLEGCEMFCTAYLDAAW------- 347
+ + P + I L+ +F V P+V+ + C D
Sbjct: 243 KIFTSKNPSYGLRLINYANLYSRIFSTEELVLATPDVVTKLKASCDEISDHVALAATLHP 302
Query: 348 ---DLTQLIGSSTFNDDQRRLSQ---------YAALFLPFRNTTYKDNKGKKI--PVVNY 393
D+ + I + F + +RLS A + P+R K ++ PV
Sbjct: 303 IFVDVERTI-QNHFGREFKRLSSIYEYHNPFWLAVILFPYRGLRCKHLPKDRVPSPVAKI 361
Query: 394 TFRDSLKRKASDAETVMNI 412
R+ LK K D + V I
Sbjct: 362 LMRNGLKTKNYDVDIVTTI 380
>gi|444320673|ref|XP_004180993.1| hypothetical protein TBLA_0E04200 [Tetrapisispora blattae CBS 6284]
gi|387514036|emb|CCH61474.1| hypothetical protein TBLA_0E04200 [Tetrapisispora blattae CBS 6284]
Length = 550
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/267 (44%), Positives = 171/267 (64%), Gaps = 14/267 (5%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFNLET------VLRVAGGWVRDKLLGKDCYDIDIAL 119
+ I+L+ ETKI + L + + H+N VLR+ GGWVRDKLL + +D+DIA+
Sbjct: 27 INTSIQLSPIETKICNLLNDYILHYNNSNRNKDPLVLRITGGWVRDKLLNQSSHDLDIAI 86
Query: 120 DNMMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNL 176
+ M G +FAT + E+L+ + P I NP++SKHLET T KL+D+ +DFVNL
Sbjct: 87 NTMSGEQFATNLNEFLAINYSNYNIKPHTIHKINKNPEKSKHLETTTTKLFDIEVDFVNL 146
Query: 177 RCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVT 236
R E+YS++SRIP +FGT E+DA RRD T+N+LFYNI + +ED T G+ DL+ G + T
Sbjct: 147 RSEEYSDDSRIPVTKFGTPEQDALRRDATLNALFYNIQSKQIEDFTKTGLKDLEDGILRT 206
Query: 237 PLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEID 296
PLPP+ TFLDDPLRVLR IRF +RF+F +D + ++ A +KISRER+G E +
Sbjct: 207 PLPPRQTFLDDPLRVLRLIRFASRFNFKIDPATLQEMNDIDINNAFISKISRERIGIEFE 266
Query: 297 LMVSGNQPVKAM-----THICGLTLFW 318
++ G P+ + T+I + FW
Sbjct: 267 KILKGTSPLIGISLIQSTNIDNVIFFW 293
>gi|430811563|emb|CCJ30949.1| unnamed protein product [Pneumocystis jirovecii]
Length = 551
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 193/331 (58%), Gaps = 16/331 (4%)
Query: 53 MSEQEPPRPVVVQ-VRDKIELTDTETKIFSCLLNT---LRHFNLETVLRVAGGWVRDKLL 108
M Q P V + ++I L E I S LL + LR AGGWVRDKLL
Sbjct: 1 MCNQSPKTGVSLDDFSEEIILNKNENSIKSLLLQVAEECKRLGKPVTLRFAGGWVRDKLL 60
Query: 109 GKDCYDIDIALDNMMGSEFATKVAEYL--SATGETAPSGFGVIPSNPDQSKHLETATMKL 166
G + +D+D+ +D M G +FA ++ YL T I NP++SKHLETAT ++
Sbjct: 61 GIESHDLDVVVDTMSGYDFAMHLSAYLRKDMGSLTKFPHIAKIERNPEKSKHLETATTRI 120
Query: 167 YDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGI 226
D IDFVNLR E YS +SRIP + FGT EEDA RRD TIN+LFYN++TS +ED T RG+
Sbjct: 121 MDFGIDFVNLRSEKYSSDSRIPIIEFGTPEEDALRRDCTINALFYNLHTSQIEDFTKRGL 180
Query: 227 ADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKI 286
D+K KIVTPL P +TF DDPLR+LR IRF +RF F +D E+K A E+K +L KI
Sbjct: 181 KDIKLKKIVTPLKPYSTFEDDPLRILRCIRFASRFGFKIDSEVKLAMMHPEIKKSLLIKI 240
Query: 287 SRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPE-----VLEGCEMFCTA 341
S+ER+G E++ M+ G P ++ I L L+ +F + +P+ +L E+
Sbjct: 241 SKERIGVELEKMLKGPDPYSSLILIHELGLYENIFATEILGKPKNNMKMILPVLELVKWI 300
Query: 342 YLDAAWD-LTQLIGSSTF----NDDQRRLSQ 367
D + D LT I +++ N+ Q +L+Q
Sbjct: 301 MYDQSKDKLTNTINNNSKNELENESQNKLNQ 331
>gi|358396856|gb|EHK46231.1| hypothetical protein TRIATDRAFT_291450 [Trichoderma atroviride IMI
206040]
Length = 540
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/396 (38%), Positives = 213/396 (53%), Gaps = 26/396 (6%)
Query: 61 PVVVQVRDKIELTDTETKIFSCLLNTLRHFNLET------VLRVAGGWVRDKLLGKDCYD 114
P ++LT+ E ++ S LLN + T VLR AGGWVRD+LLG + +D
Sbjct: 14 PATAMSTHSVKLTEREKQLRSLLLNVANFIDTTTTLGQPLVLRWAGGWVRDRLLGIESHD 73
Query: 115 IDIALDNMMGSEFATKVAEYLSATGETAPSGFGV--------IPSNPDQSKHLETATMKL 166
ID+A++ M G +FA ++EY GF I SNPD+SKHLETA +KL
Sbjct: 74 IDVAINAMTGQQFAQHISEYCKQPDAAKIHGFAPGDIGRLHHIASNPDKSKHLETAMVKL 133
Query: 167 YDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGI 226
+ + +DFVNLR E Y+E+SR P M FGTAEEDA RRD TIN+LFYN++T +ED TG GI
Sbjct: 134 FGMDLDFVNLRKETYAEDSRNPQMEFGTAEEDALRRDATINALFYNLHTEEIEDFTG-GI 192
Query: 227 ADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKI 286
D++ I TPL P TF+DDPLRVLR IRF AR F +DE +K + ++ AL KI
Sbjct: 193 RDMEAKMIRTPLEPYQTFIDDPLRVLRLIRFAARLGFTIDETSEKFMNNKDILEALRKKI 252
Query: 287 SRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAY--LD 344
SRERVG E++ M+ G P A+ I L L+ +F P + E VL + AY LD
Sbjct: 253 SRERVGVELEKMLKGKTPQSALEIIDRLGLYQAIFSDPAE-EDVVLPDISRWHVAYSCLD 311
Query: 345 ------AAWDLTQLIGSSTFNDDQRRLSQYAAL--FLPFRNTTYKDNKGKKIPVVNYTFR 396
++QL+ +D AA+ ++P + + + K +P V R
Sbjct: 312 ELLKDREPGSISQLLVDVNDSDTTYLAWNLAAVSPWIPENDRSGRKQKANTLPRVGIIAR 371
Query: 397 DSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDV 432
+ K + H+ + L L S+ + +
Sbjct: 372 EGFKASNKLTTVMAACHKHRAEILDLKRSVCESSPI 407
>gi|6321016|ref|NP_011095.1| Cca1p [Saccharomyces cerevisiae S288c]
gi|135969|sp|P21269.1|CCA1_YEAST RecName: Full=CCA tRNA nucleotidyltransferase, mitochondrial;
AltName: Full=CCA-adding enzyme; AltName: Full=tRNA
CCA-pyrophosphorylase; AltName: Full=tRNA
adenylyltransferase; AltName: Full=tRNA
nucleotidyltransferase; Flags: Precursor
gi|172994|gb|AAA35160.1| transfer RNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|603409|gb|AAB64695.1| Cca1p: tRNA nucleotidyltransferase(tRNA CCA-pyrophosphorylase)
[Saccharomyces cerevisiae]
gi|151944885|gb|EDN63144.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae YJM789]
gi|190405724|gb|EDV08991.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae RM11-1a]
gi|207345792|gb|EDZ72498.1| YER168Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271312|gb|EEU06382.1| Cca1p [Saccharomyces cerevisiae JAY291]
gi|285811802|tpg|DAA07830.1| TPA: Cca1p [Saccharomyces cerevisiae S288c]
gi|349577829|dbj|GAA22997.1| K7_Cca1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 546
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 167/265 (63%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 149 EKYTELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 209 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 268
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 269 LVGPTPLLALQLIQRAHLENVIFFW 293
>gi|381351860|gb|AFG25347.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352008|gb|AFG25421.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352050|gb|AFG25442.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
Length = 300
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 167/265 (63%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQNICNLLNDYTDLYNQKYHNKREPLTLRITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 149 EKYTELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 209 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 268
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 269 LVGPTPLLALQLIQRAHLENVIFFW 293
>gi|381352052|gb|AFG25443.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
Length = 300
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 167/265 (63%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQNICNLLNDYTDLYNQKYHNKHEPLTLRITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 149 EKYTELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 209 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 268
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 269 LVGPTPLLALQLIQRAHLENVIFFW 293
>gi|8698608|gb|AAF78448.1|AF098803_1 tRNA nucleotidyltransferase [Candida glabrata]
Length = 543
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/264 (46%), Positives = 169/264 (64%), Gaps = 14/264 (5%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNL------ETVLRVAGGWVRDKLLGKDCYDIDIALDNM 122
+I+LT+ ET+I + L + H+N LR+ GGWVRDKLLG+ +D+DIA++ M
Sbjct: 14 RIQLTEKETRICNLLKDYTAHYNSLHYGQEPLTLRITGGWVRDKLLGQGSHDLDIAINIM 73
Query: 123 MGSEFATKVAEYLSATGE---TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCE 179
G EFA + YL + P I NP++SKHLETAT KL+D+ +DFVNLR E
Sbjct: 74 SGEEFANGLNGYLLEHFDKYGVKPHSIHKIDKNPEKSKHLETATTKLFDVEVDFVNLRSE 133
Query: 180 DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP 239
+Y+E+SRIPT +FGT EEDA RRD T+N+LFYNI +VED T RG DL+ G + TPLP
Sbjct: 134 EYTEDSRIPTTQFGTPEEDALRRDATLNALFYNIQQDAVEDFTKRGWQDLQDGVLRTPLP 193
Query: 240 PKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
+ TFLDDPLRVLR IRF +RF+F ++ + K E+ A KISRER+G E++ ++
Sbjct: 194 ARQTFLDDPLRVLRLIRFASRFNFNIEAGVLKEMHDPEINEAFNNKISRERIGVEMEKIL 253
Query: 300 SGNQPVKAM-----THICGLTLFW 318
G P+ + TH+ + W
Sbjct: 254 VGPNPILGLKLIQRTHLENVIFLW 277
>gi|392299872|gb|EIW10964.1| Cca1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 529
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 167/265 (63%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 12 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 71
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 72 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 131
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 132 EKYTELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 191
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 192 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 251
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 252 LVGPTPLLALQLIQRAHLENVIFFW 276
>gi|381351862|gb|AFG25348.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351864|gb|AFG25349.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351866|gb|AFG25350.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351868|gb|AFG25351.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351870|gb|AFG25352.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351872|gb|AFG25353.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351874|gb|AFG25354.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351876|gb|AFG25355.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351878|gb|AFG25356.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351880|gb|AFG25357.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351882|gb|AFG25358.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351884|gb|AFG25359.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351886|gb|AFG25360.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351888|gb|AFG25361.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351890|gb|AFG25362.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351892|gb|AFG25363.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351894|gb|AFG25364.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351896|gb|AFG25365.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351898|gb|AFG25366.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351900|gb|AFG25367.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351902|gb|AFG25368.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351904|gb|AFG25369.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351906|gb|AFG25370.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351908|gb|AFG25371.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351910|gb|AFG25372.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351912|gb|AFG25373.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351914|gb|AFG25374.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351916|gb|AFG25375.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351918|gb|AFG25376.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351920|gb|AFG25377.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351922|gb|AFG25378.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351924|gb|AFG25379.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351926|gb|AFG25380.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351928|gb|AFG25381.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351930|gb|AFG25382.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351934|gb|AFG25384.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351936|gb|AFG25385.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351938|gb|AFG25386.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351940|gb|AFG25387.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351942|gb|AFG25388.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351944|gb|AFG25389.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351946|gb|AFG25390.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351948|gb|AFG25391.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351950|gb|AFG25392.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351952|gb|AFG25393.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351954|gb|AFG25394.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351966|gb|AFG25400.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351968|gb|AFG25401.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351970|gb|AFG25402.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351972|gb|AFG25403.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351974|gb|AFG25404.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351976|gb|AFG25405.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351978|gb|AFG25406.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351982|gb|AFG25408.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351986|gb|AFG25410.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351988|gb|AFG25411.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351990|gb|AFG25412.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351992|gb|AFG25413.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351994|gb|AFG25414.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351996|gb|AFG25415.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351998|gb|AFG25416.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352000|gb|AFG25417.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352002|gb|AFG25418.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352004|gb|AFG25419.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352006|gb|AFG25420.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352010|gb|AFG25422.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352012|gb|AFG25423.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352014|gb|AFG25424.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352016|gb|AFG25425.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352018|gb|AFG25426.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352020|gb|AFG25427.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352022|gb|AFG25428.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352024|gb|AFG25429.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352026|gb|AFG25430.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352028|gb|AFG25431.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352030|gb|AFG25432.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352032|gb|AFG25433.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352034|gb|AFG25434.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352036|gb|AFG25435.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352038|gb|AFG25436.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352040|gb|AFG25437.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352042|gb|AFG25438.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352044|gb|AFG25439.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352046|gb|AFG25440.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352054|gb|AFG25444.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381352056|gb|AFG25445.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
Length = 300
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 167/265 (63%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 149 EKYTELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 209 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 268
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 269 LVGPTPLLALQLIQRAHLENVIFFW 293
>gi|323355345|gb|EGA87170.1| Cca1p [Saccharomyces cerevisiae VL3]
gi|365765945|gb|EHN07448.1| Cca1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 537
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 167/265 (63%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 20 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 79
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 80 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 139
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 140 EKYTELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 199
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 200 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 259
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 260 LVGPTPLLALQLIQRAHLENVIFFW 284
>gi|301093284|ref|XP_002997490.1| tRNA nucleotidyltransferase, putative [Phytophthora infestans
T30-4]
gi|262110632|gb|EEY68684.1| tRNA nucleotidyltransferase, putative [Phytophthora infestans
T30-4]
Length = 588
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/269 (47%), Positives = 173/269 (64%), Gaps = 3/269 (1%)
Query: 55 EQEPPRPVVVQVRD-KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY 113
++ PPR D I LT E +FS L + + +T LRVAGGWVRDKL G +
Sbjct: 36 DKSPPRTSNKNASDLSISLTPAEDSLFSFLEYIQQLYAPKTQLRVAGGWVRDKLRGAESE 95
Query: 114 DIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDF 173
DIDIALDN+MG++FA + ++ + PS GV+ +N D+SKHLE AT+ + +D
Sbjct: 96 DIDIALDNLMGAKFARYITKF-QRDRKLPPSSVGVVKANSDKSKHLEVATVTIEGSTVDL 154
Query: 174 VNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGK 233
V+LR E+Y+ +SR+P + F T E+DA RRDLTIN+LFYN++T VED TG+G+ DLK+G
Sbjct: 155 VHLRAEEYTPDSRVPEVTFATPEDDASRRDLTINALFYNLHTRHVEDFTGKGVNDLKNGV 214
Query: 234 IVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD-EVKAALAAKISRERVG 292
I TP P TFLDDPLRVLRA+RF F F LD L+ A E+ A+ K+SRER+G
Sbjct: 215 IRTPREPVQTFLDDPLRVLRALRFACEFGFTLDPALETAVLEQREIVGAMRRKVSRERIG 274
Query: 293 TEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
E+ M+SGN PV+A + L +VF
Sbjct: 275 IEVRKMLSGNDPVRAFGLLRKFYLLELVF 303
>gi|381352048|gb|AFG25441.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
Length = 300
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 167/265 (63%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 149 EKYTELSRIPKVCFGTPEEDALRRDATLNALFYNIHKREVEDFTKRGLQDLKDGVLRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 209 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 268
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 269 LVGPTPLLALQLIQRAHLENVIFFW 293
>gi|254578934|ref|XP_002495453.1| ZYRO0B11748p [Zygosaccharomyces rouxii]
gi|238938343|emb|CAR26520.1| ZYRO0B11748p [Zygosaccharomyces rouxii]
Length = 539
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/264 (45%), Positives = 171/264 (64%), Gaps = 14/264 (5%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLET------VLRVAGGWVRDKLLGKDCYDIDIALDNM 122
K+ L+D E KI L + +N + LR+ GGWVRDKLLG D +D+DIA++ M
Sbjct: 27 KLVLSDAEKKICGFLNDYAAFYNQKNPTSKPLELRITGGWVRDKLLGYDSHDLDIAINLM 86
Query: 123 MGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCE 179
G +FA ++ +YL + + P+ I NP++SKHLETAT KL+ + +DFVNLR E
Sbjct: 87 TGEQFAIQLGDYLRENYSKYKVTPNNVHKIDKNPEKSKHLETATTKLFGMEVDFVNLRSE 146
Query: 180 DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP 239
+Y+E SRIP ++FGT EEDA RRD T+N+LFYNI + VED T RGI DLK G + TPLP
Sbjct: 147 EYTEQSRIPIVKFGTPEEDALRRDATLNALFYNIKQNKVEDFTRRGIEDLKSGILRTPLP 206
Query: 240 PKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
P+ TFLDDPLRVLR IRF ++++F +D E + ++ A +K+S+ER+G E+D ++
Sbjct: 207 PRQTFLDDPLRVLRLIRFASKYNFKIDGEALNEMNNRDINMAFGSKVSKERIGVEVDKIL 266
Query: 300 SGNQPVKAMT-----HICGLTLFW 318
G P+ ++ HI + W
Sbjct: 267 RGPNPLLGISLIQQAHIDNVVFVW 290
>gi|323337860|gb|EGA79100.1| Cca1p [Saccharomyces cerevisiae Vin13]
Length = 452
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 166/265 (62%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 20 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 79
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 80 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 139
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 140 EKYXELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 199
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 200 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 259
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 260 LVGPTPLLALQLIQRAHLENVIFFW 284
>gi|115387873|ref|XP_001211442.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195526|gb|EAU37226.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 522
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 157/407 (38%), Positives = 212/407 (52%), Gaps = 42/407 (10%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS------------ATGE-- 140
VLR GGWVRDKLLG D DID+A++ M G +F ++ EYL A GE
Sbjct: 41 VLRFTGGWVRDKLLGVDSQDIDVAINTMTGYQFGMRLKEYLDQPENLEKYRTNHANGEMR 100
Query: 141 TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
A I +NP++SKHLET T K++ L ID VNLR E Y+++SR P M FGTAEEDA
Sbjct: 101 EAIVSLHKIEANPEKSKHLETVTTKIFGLDIDLVNLRKETYTDDSRNPQMEFGTAEEDAM 160
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD TIN+LFYN+N S VEDLTGRG D++H I TPL P TF DDPLRVLR IRF +R
Sbjct: 161 RRDATINALFYNLNESKVEDLTGRGFEDMRHRIIRTPLEPYQTFKDDPLRVLRLIRFASR 220
Query: 261 FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIV 320
+ +DEE ++A + ++ AL KISRERVGTE++ M+ G P A+ I L L+ +
Sbjct: 221 LGYRIDEETERAMQNSDISVALKLKISRERVGTELEKMLRGPDPRGALHFIDRLGLYPTI 280
Query: 321 FKLPLQVEPEVLEGCEMFCTAY------LDAAWDLTQLIGSSTFNDDQRRLSQYAALFL- 373
F + +V + AY L + T L + D + L
Sbjct: 281 FT---NYQDDVRCDTASWSLAYNAMERLLRDDAEATTLCRTQLIRDKSETYHAWIITALA 337
Query: 374 PFRNTTYKDNKGKKI----PVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSA 429
P+ N + +G K P RDSL+ + + + EK + + SL+
Sbjct: 338 PWSNVPTRVMEGPKAKPLPPRAAEVARDSLRSDNKTVTLLADAAKSWEKIIDVKSSLLKG 397
Query: 430 EDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTL 476
A+++R G LR KK WR+ +++S L
Sbjct: 398 AMGGT--------------AAEVRQQIGLYLRAWKKDWRLCMVLSAL 430
>gi|323348859|gb|EGA83097.1| Cca1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 537
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 166/265 (62%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 20 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 79
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 80 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 139
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 140 EKYXELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 199
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 200 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 259
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 260 LVGPTPLLALQLIQRAHLENVIFFW 284
>gi|259146097|emb|CAY79357.1| Cca1p [Saccharomyces cerevisiae EC1118]
Length = 546
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 166/265 (62%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 149 EKYIELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 209 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 268
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 269 LVGPTPLLALQLIQRAHLENVIFFW 293
>gi|68466285|ref|XP_722917.1| potential tRNA CCA-pyrophosphorylase [Candida albicans SC5314]
gi|68466576|ref|XP_722770.1| potential tRNA CCA-pyrophosphorylase [Candida albicans SC5314]
gi|46444767|gb|EAL04040.1| potential tRNA CCA-pyrophosphorylase [Candida albicans SC5314]
gi|46444924|gb|EAL04196.1| potential tRNA CCA-pyrophosphorylase [Candida albicans SC5314]
Length = 547
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 162/464 (34%), Positives = 249/464 (53%), Gaps = 48/464 (10%)
Query: 45 GFLRCKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFN------LETVLRV 98
G +R + T++ RPV + I LT TE KI + L+ ++N LE LR+
Sbjct: 5 GLIRFQHTLT-HTMKRPV----SNSIVLTTTEEKIRNVLVGYCDYYNKTNNDSLE--LRI 57
Query: 99 AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL-SATGETAPSGFGVIPSNPDQSK 157
GGWVRDKLLG + +DIDIA++++ G EF + +YL E + + I NP++SK
Sbjct: 58 TGGWVRDKLLGNESHDIDIAVNHLTGEEFVNGLHDYLRQHEPELSMNHVHTIKMNPEKSK 117
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
HLET T KL+ + IDFVNLR E+Y+ +SR+P++ FGT E+DA RRD T+N+LFYN+N
Sbjct: 118 HLETCTTKLFGVDIDFVNLRSEEYTHDSRVPSIEFGTPEQDAVRRDATLNALFYNLNQGE 177
Query: 218 VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDE 277
+ED T RG++DL++G + TPL P TFLDDPLR++R IRF ++F+F+++ E A +
Sbjct: 178 IEDYTKRGLSDLQNGILKTPLAPIKTFLDDPLRIIRLIRFASKFNFVVESETLNAMKEEH 237
Query: 278 VKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP---LQVEPEVLEG 334
K+AL+ KIS+ER+ E+ +++ N P + I + L +F +P + + E LE
Sbjct: 238 NKSALSTKISKERIEIELRKILTSNNPGYGLQLINYVDLASSIFYVPELAKEFDNESLEE 297
Query: 335 CEMFCTAYLDAAW----DLTQLIGSST-----------FNDDQRRLSQYAALFLPFRNT- 378
+++ A + Q I +ST NDD + + + + P+ N
Sbjct: 298 ARSQLACHMEIASLIYPNFKQTINNSTEKFKNEFAALMTNDDYKNVFWLSVILHPYTNVK 357
Query: 379 TYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIH---RVLEKFLSLIPSLVSAEDVKVN 435
+ K N+ + N R L K SD V I+ L +F S P LV D+ +
Sbjct: 358 SCKPNRD----IFNQYLRLGLTSKKSDIAKVSAINMNSAELSRFFS-APELVKRSDIGL- 411
Query: 436 DGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLLYP 479
L P+ + L ++ LL ++K + L L P
Sbjct: 412 ------YLRKFPEFASLNLIVNALLDCVRKVDQFTQLPKELPVP 449
>gi|381351984|gb|AFG25409.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
Length = 300
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 167/265 (63%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP + FGT EED+ RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 149 EKYTELSRIPKVCFGTPEEDSLRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 209 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 268
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 269 LVGPTPLLALQLIQRAHLENVIFFW 293
>gi|448082408|ref|XP_004195133.1| Piso0_005676 [Millerozyma farinosa CBS 7064]
gi|359376555|emb|CCE87137.1| Piso0_005676 [Millerozyma farinosa CBS 7064]
Length = 574
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 124/263 (47%), Positives = 165/263 (62%), Gaps = 6/263 (2%)
Query: 65 QVRDKIELTDTETKIFSCLLNTLRHFNLET------VLRVAGGWVRDKLLGKDCYDIDIA 118
+ KI L + E+K+ S LL H+N +R+ GGWVRDKLLGK+ +D+DIA
Sbjct: 36 HIDSKINLNEKESKLRSLLLKFCNHYNESAPREEKLEIRITGGWVRDKLLGKESHDLDIA 95
Query: 119 LDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
L+N+ G +FA ++ +YL I SNP++SKHLET T ++ IDFVNLR
Sbjct: 96 LNNLSGEDFADQLLKYLEKNEPQYVFKRNTIKSNPEKSKHLETCTARVMGFDIDFVNLRS 155
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E+YSENSR+P + GTAEEDA+RRD T+N+LFYNIN VED T RG+ DL+ G + TPL
Sbjct: 156 ENYSENSRVPQIECGTAEEDAFRRDATLNALFYNINHDMVEDFTRRGLDDLRSGILRTPL 215
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P TFLDDPLRVLR IRF +RF+F +D+ +A E++ AL KISRERVG E
Sbjct: 216 DPLQTFLDDPLRVLRLIRFASRFNFKIDDSTFEAMKKPEIRTALIHKISRERVGDEFAKT 275
Query: 299 VSGNQPVKAMTHICGLTLFWIVF 321
++ + + I L +F
Sbjct: 276 LTSDHVEYGLNLIASANLVSCIF 298
>gi|381351932|gb|AFG25383.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
Length = 300
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 166/265 (62%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + L + GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLXITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 149 EKYTELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 209 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 268
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 269 LVGPTPLLALQLIQRAHLENVIFFW 293
>gi|345570626|gb|EGX53447.1| hypothetical protein AOL_s00006g313 [Arthrobotrys oligospora ATCC
24927]
Length = 520
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 156/399 (39%), Positives = 214/399 (53%), Gaps = 44/399 (11%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET---APSGFGVIPS 151
VLR+ GGWVRDKLL +DIDI ++NM G EFA+ + E+L+ E I S
Sbjct: 50 VLRITGGWVRDKLLNGKSHDIDIGINNMTGFEFASHLNEFLTNNIEKYNIPAKSIHKIES 109
Query: 152 NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFY 211
NP++SKHLETAT K+ L IDFVNLRCE YS++SRIP M FGT +EDA RRD +N+LFY
Sbjct: 110 NPEKSKHLETATTKILGLDIDFVNLRCESYSDDSRIPKMEFGTPQEDALRRDACVNALFY 169
Query: 212 NINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
N+ T VED T RG+ DL++ + TPLPP TF DDPLRVLR IRF +R F +D + +
Sbjct: 170 NLMTQQVEDFTERGLKDLQNRILRTPLPPLQTFKDDPLRVLRLIRFASRLSFTIDPKAAE 229
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEV 331
A ++K AL KISRERVG E++ M+ G +P +A+ I L L + ++P E ++
Sbjct: 230 AMQHPKIKFALKQKISRERVGVEVEKMLYGARPFEALDLIEKLGLGDAILEIPNLNEEKL 289
Query: 332 LE--------GCE----MFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTT 379
E G E +F ++ T+ + S D+ L +AA +P+
Sbjct: 290 EEVRSVDLRRGIETVKWLFGEFRSKEGYEATRGLAGS--ERDEYILWIFAAT-MPWIRVF 346
Query: 380 YKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLE--KFLSLIPSLVSAEDVKVNDG 437
+D K KI V RD LK D E++ + L K+ PS ++
Sbjct: 347 VQDKKKGKINVGVVAARDGLKLSNKDFESLSKMAYALNGVKYTIRNPSGLT--------- 397
Query: 438 QWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTL 476
R + G LR + WR+ +L S L
Sbjct: 398 ---------------RSVLGKYLRTMGSEWRIQVLASLL 421
>gi|366999414|ref|XP_003684443.1| hypothetical protein TPHA_0B03380 [Tetrapisispora phaffii CBS 4417]
gi|357522739|emb|CCE62009.1| hypothetical protein TPHA_0B03380 [Tetrapisispora phaffii CBS 4417]
Length = 549
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 158/466 (33%), Positives = 233/466 (50%), Gaps = 63/466 (13%)
Query: 49 CKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLET------VLRVAGGW 102
C TMS + P I+LT E+KI + L +N LR+ GGW
Sbjct: 22 CYRTMSTSQKRLPA-------IQLTPLESKICTLLNEFTSDYNASNNEAEALELRITGGW 74
Query: 103 VRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT---GETAPSGFGVIPSNPDQSKHL 159
VRDKLLG D+DIA++ M G FA K+ +YL+ P I NP++SKHL
Sbjct: 75 VRDKLLGSQSNDLDIAVNIMSGESFALKLNDYLTENFRKYNVEPHSIHKIDKNPEKSKHL 134
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVE 219
ETAT KL+ + +DFVNLR E+Y+++SRIPT+ FGT ++DA RRD T+N+LFYNI + +E
Sbjct: 135 ETATTKLFGVEVDFVNLRSEEYTDDSRIPTVEFGTPKQDALRRDATLNALFYNIGKNEIE 194
Query: 220 DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVK 279
DLT G+ DLK + TPLPP+ TFLDDPLR+LR IRF +R++F LD E + ++
Sbjct: 195 DLTNSGLQDLKDRTLRTPLPPRKTFLDDPLRILRLIRFASRYNFKLDPETLETMKDSDIN 254
Query: 280 AALAAKISRERVGTEIDLMVSGNQPVKAM-----THICGLTLFW-----IVFKLPLQVEP 329
A KISRER+G E++ ++ G P+ + THI + W IV
Sbjct: 255 LAFYVKISRERIGVEMEKIIDGETPLIGINLIQYTHIDNVIFHWHNDNTIVDFNKTNNTK 314
Query: 330 EVLEGCEMFCTAYLDAAW-DLTQLIGSSTFNDDQ--------------RRLSQYAALFLP 374
+ E++ + L+A D+ +++ + ++ +R+ + LP
Sbjct: 315 DFNLISEIYDNSVLNAHIKDVVKVLNNKAKLENDIPILYSLIKKSPAFKRIFLLGFILLP 374
Query: 375 FRNT----TYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAE 430
F+N K KIPV +D LK ++A + I +E + ++
Sbjct: 375 FQNLKIIWNVKKKVNNKIPVTESIVKDGLKFNKNEASLIALIVDSIEHYNEIV------- 427
Query: 431 DVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTL 476
K N+ + S R G LRE K W+V ++ L
Sbjct: 428 -TKFNNDR----------NSLSRSEIGLFLREFKGNWQVVHFVTLL 462
>gi|255720689|ref|XP_002545279.1| hypothetical protein CTRG_00060 [Candida tropicalis MYA-3404]
gi|240135768|gb|EER35321.1| hypothetical protein CTRG_00060 [Candida tropicalis MYA-3404]
Length = 551
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 171/266 (64%), Gaps = 9/266 (3%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFN------LETVLRVAGGWVRDKLLGKDCYDIDIAL 119
V + I LT E I + L+ ++N LE LR+ GGWVRDKLLG D +DIDIA+
Sbjct: 24 VNETITLTPPEENIRNVLVGYCDYYNKLNKDPLE--LRITGGWVRDKLLGNDSHDIDIAV 81
Query: 120 DNMMGSEFATKVAEYLSA-TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
+++ G +F + EYL E + + I NP++SKHLET T KL+ + IDFVNLR
Sbjct: 82 NHLTGEQFVNGLHEYLKKYEPELSTNHVHTIKMNPEKSKHLETCTTKLFGIDIDFVNLRS 141
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E+Y+ SR+PT+ FGT EEDA RRD T+N+LFYN+N S +ED T RG+ DL+HG + TPL
Sbjct: 142 EEYTLESRVPTIEFGTPEEDAVRRDATLNALFYNLNKSVIEDFTKRGLDDLEHGILRTPL 201
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
PP TFLDDPLR++R IRF +RF+F+++ E KA D K AL KIS+ERV E+ +
Sbjct: 202 PPIQTFLDDPLRIIRLIRFASRFNFVIEPETLKAMKDDRNKVALQNKISKERVEIELRKI 261
Query: 299 VSGNQPVKAMTHICGLTLFWIVFKLP 324
++ P + I + L +F +P
Sbjct: 262 LTSKNPGYGLQLINYVDLAGSIFYVP 287
>gi|296412019|ref|XP_002835725.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629515|emb|CAZ79882.1| unnamed protein product [Tuber melanosporum]
Length = 519
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 160/238 (67%), Gaps = 6/238 (2%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGE---TAPSGFGVIPS 151
VLR GGWVRDKLLG DID+ ++NM G +FAT+++EY++A + + P I S
Sbjct: 44 VLRFTGGWVRDKLLGTRSVDIDVGVNNMSGYDFATRLSEYMNANRDEPSSKPCRVSKIES 103
Query: 152 NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFY 211
NP++SKHLETAT K+ L IDFVNLR E YS +SRIP M FGT E+DA RRD TIN+LFY
Sbjct: 104 NPEKSKHLETATAKVLGLDIDFVNLRSETYSGDSRIPHMEFGTPEKDALRRDCTINALFY 163
Query: 212 NINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
N++T VED TG G+ DL I TPLPP+ TF DDPLRVLR IRF +R F + E+K
Sbjct: 164 NLHTEQVEDFTGLGLQDLTARLIRTPLPPRETFTDDPLRVLRLIRFSSRLGFTIVPEVKA 223
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEP 329
A E+K A+KISRERVG EI+ M G P +++ I L L+ +F P+Q P
Sbjct: 224 AMKLPEIK---ASKISRERVGIEIEKMFKGCNPHASLSLIHELDLYNEIFAPPIQDLP 278
>gi|381351962|gb|AFG25398.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
Length = 300
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 166/265 (62%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 149 EKYTELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 209 SAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEEI 268
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 269 LVGPTPLLALQLIQRAHLENVIFFW 293
>gi|381351958|gb|AFG25396.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351960|gb|AFG25397.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351964|gb|AFG25399.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
gi|381351980|gb|AFG25407.1| tRNA nucleotidyltransferase, partial [Saccharomyces cerevisiae]
Length = 300
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 166/265 (62%), Gaps = 15/265 (5%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 149 EKYTELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG E++ +
Sbjct: 209 SAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKI 268
Query: 299 VSGNQPVKAM-----THICGLTLFW 318
+ G P+ A+ H+ + FW
Sbjct: 269 LVGPTPLLALQLIQRAHLENVIFFW 293
>gi|67900650|ref|XP_680581.1| hypothetical protein AN7312.2 [Aspergillus nidulans FGSC A4]
gi|40742173|gb|EAA61363.1| hypothetical protein AN7312.2 [Aspergillus nidulans FGSC A4]
Length = 1070
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/273 (47%), Positives = 168/273 (61%), Gaps = 22/273 (8%)
Query: 70 IELTDTETKIFSCLLNTLRHFN-----------LETVLRVAGGWVRDKLLGKDCYDIDIA 118
I+LT ET + LL+ ++ +TVLR GGWVRDKLLG + +DID+A
Sbjct: 15 IQLTPCETTLKDLLLDVAQYIQDCDTANRHGDGTKTVLRFTGGWVRDKLLGVESHDIDVA 74
Query: 119 LDNMMGSEFATKVAEYL----------SATGETAPSGFGVIPSNPDQSKHLETATMKLYD 168
++NM G +F T + EYL GE S I +NP++SKHLET T K++
Sbjct: 75 INNMTGYQFGTMLKEYLDIPENLDKYKGQNGEKELS-LHKIEANPEKSKHLETVTTKIFG 133
Query: 169 LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIAD 228
+D VNLR E Y ENSR P M FGTAEEDA RRD TIN+LFYN+N S VEDLTGRG+ D
Sbjct: 134 FDVDLVNLRKEAYDENSRTPQMEFGTAEEDALRRDATINALFYNLNESKVEDLTGRGLDD 193
Query: 229 LKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISR 288
++ I TP+ P TF DDPLRVLR IRF +R F +D++ + A ++ AAL KISR
Sbjct: 194 MRDEIIRTPMEPYQTFKDDPLRVLRLIRFASRLGFRIDKDTENAMQHGDIGAALKLKISR 253
Query: 289 ERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
ERVG E+ M+ G P A+ I L L+ I+F
Sbjct: 254 ERVGIEVQKMLQGPDPRGALHIIDRLNLYPIIF 286
>gi|259483336|tpe|CBF78640.1| TPA: tRNA nucleotidyltransferase (AFU_orthologue; AFUA_2G16660)
[Aspergillus nidulans FGSC A4]
Length = 605
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 174/294 (59%), Gaps = 22/294 (7%)
Query: 49 CKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFN-----------LETVLR 97
+A ++ P Q I+LT ET + LL+ ++ +TVLR
Sbjct: 74 AEAGVATMNPAADGTSQQLPTIQLTPCETTLKDLLLDVAQYIQDCDTANRHGDGTKTVLR 133
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL----------SATGETAPSGFG 147
GGWVRDKLLG + +DID+A++NM G +F T + EYL GE S
Sbjct: 134 FTGGWVRDKLLGVESHDIDVAINNMTGYQFGTMLKEYLDIPENLDKYKGQNGEKELS-LH 192
Query: 148 VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTIN 207
I +NP++SKHLET T K++ +D VNLR E Y ENSR P M FGTAEEDA RRD TIN
Sbjct: 193 KIEANPEKSKHLETVTTKIFGFDVDLVNLRKEAYDENSRTPQMEFGTAEEDALRRDATIN 252
Query: 208 SLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDE 267
+LFYN+N S VEDLTGRG+ D++ I TP+ P TF DDPLRVLR IRF +R F +D+
Sbjct: 253 ALFYNLNESKVEDLTGRGLDDMRDEIIRTPMEPYQTFKDDPLRVLRLIRFASRLGFRIDK 312
Query: 268 ELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ + A ++ AAL KISRERVG E+ M+ G P A+ I L L+ I+F
Sbjct: 313 DTENAMQHGDIGAALKLKISRERVGIEVQKMLQGPDPRGALHIIDRLNLYPIIF 366
>gi|302779734|ref|XP_002971642.1| hypothetical protein SELMODRAFT_25834 [Selaginella moellendorffii]
gi|300160774|gb|EFJ27391.1| hypothetical protein SELMODRAFT_25834 [Selaginella moellendorffii]
Length = 197
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 148/199 (74%), Gaps = 5/199 (2%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
+RVAGGWVRDKLLG + +D+DIALD+M G +F +V L T P + VI SNP++
Sbjct: 1 VRVAGGWVRDKLLGVESHDLDIALDDMTGQQFCDRVVPCLRKTD--PPCSYKVIKSNPER 58
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFYNIN 214
SKHLET +++ +D VNLR E YS++SRIPT M+FGT EDAYRRDLTINSLFYN+
Sbjct: 59 SKHLETTKLEILGGELDVVNLRSETYSKDSRIPTSMKFGTPSEDAYRRDLTINSLFYNVA 118
Query: 215 TSSVEDLTGRG--IADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
VED TGRG + DLK GKI TPLPP TFLDDPLRVLR+IRF ARF+F LDEEL+
Sbjct: 119 ADKVEDFTGRGLCVKDLKLGKIRTPLPPLVTFLDDPLRVLRSIRFAARFNFELDEELECV 178
Query: 273 AASDEVKAALAAKISRERV 291
A++D VKAA KI+RER+
Sbjct: 179 ASADSVKAAFETKITRERI 197
>gi|384247886|gb|EIE21371.1| mitochondrial tRNA-nucleotidyltransferase, partial [Coccomyxa
subellipsoidea C-169]
Length = 206
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/207 (62%), Positives = 149/207 (71%), Gaps = 12/207 (5%)
Query: 66 VRD-KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMG 124
VRD ++LT E ++F L TL H L+TVLR AGGWVRDKLL K+ +DIDIA+DN MG
Sbjct: 5 VRDISVQLTPQEEELFDVLTKTLEHEKLDTVLRCAGGWVRDKLLKKESHDIDIAIDNKMG 64
Query: 125 SEFATKVAEYLSA----TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCED 180
+FA + YLS+ TG+ A VI SNPDQSKHLETA M + L +D VNLR E
Sbjct: 65 QKFAEHINSYLSSRDMKTGKVA-----VIMSNPDQSKHLETARMTVAGLELDLVNLRSEK 119
Query: 181 YSEN-SRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIAD-LKHGKIVTPL 238
Y++ SRIPTM FGT EEDA RRD TINSLFYNINT SVED TG+G+ D L+H I TPL
Sbjct: 120 YADQTSRIPTMEFGTPEEDALRRDFTINSLFYNINTRSVEDFTGKGLDDLLEHRMIQTPL 179
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFIL 265
P + TF DDPLRVLRAIRFGARF F L
Sbjct: 180 PAEDTFRDDPLRVLRAIRFGARFGFKL 206
>gi|238881733|gb|EEQ45371.1| hypothetical protein CAWG_03694 [Candida albicans WO-1]
Length = 531
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 157/443 (35%), Positives = 239/443 (53%), Gaps = 43/443 (9%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFN------LETVLRVAGGWVRDKLLGKDCYDIDIAL 119
V + I LT TE KI + L+ ++N LE LR+ GGWVRDKLLG + +DIDIA+
Sbjct: 5 VSNSIVLTTTEEKIRNVLVGYCDYYNKTNNDSLE--LRITGGWVRDKLLGNESHDIDIAV 62
Query: 120 DNMMGSEFATKVAEYL-SATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
+++ G EF + YL E + + I NP++SKHLET T KL+ + IDFVNLR
Sbjct: 63 NHLTGEEFVNGLHYYLRQHEPELSMNHVHTIKMNPEKSKHLETCTTKLFGVDIDFVNLRS 122
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E+Y+ +SR+P++ FGT E+DA RRD T+N+LFYN+N +ED T RG++DL++G + TPL
Sbjct: 123 EEYTHDSRVPSIEFGTPEQDAVRRDATLNALFYNLNQGEIEDYTKRGLSDLQNGILKTPL 182
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P TFLDDPLR++R IRF ++F+F+++ E A + K+AL+ KIS+ER+ E+ +
Sbjct: 183 APIKTFLDDPLRIIRLIRFASKFNFVVESETLNAMKEEHNKSALSTKISKERIEIELRKI 242
Query: 299 VSGNQPVKAMTHICGLTLFWIVFKLP---LQVEPEVLEGCEMFCTAYLDAAW----DLTQ 351
++ N P + I + L +F +P + + E LE +++ A + Q
Sbjct: 243 LTSNNPGYGLQLINYVDLASSIFYVPELAKEFDNESLEKARSQLARHMEIASLIYPNFKQ 302
Query: 352 LIGSST-----------FNDDQRRLSQYAALFLPFRNT-TYKDNKGKKIPVVNYTFRDSL 399
I +ST NDD + + + + P+ N + K N+ + N R L
Sbjct: 303 TINNSTEKFKNEFAALMANDDYKNVFWLSVILHPYTNVKSCKPNRD----IFNQYLRLGL 358
Query: 400 KRKASDAETVMNIH---RVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLT 456
K SD V I+ L +F S P LV D+ + L P+ + L ++
Sbjct: 359 TSKKSDIAKVSAINMNSAELSRFFS-APELVKRSDIGL-------YLRKFPEFASLNLIV 410
Query: 457 GFLLREIKKFWRVALLISTLLYP 479
LL ++K + L L P
Sbjct: 411 NALLDCVRKVDQFTQLPKELPVP 433
>gi|241954086|ref|XP_002419764.1| tRNA nucleotidyltransferase, mitochondrial precursor, putative
[Candida dubliniensis CD36]
gi|223643105|emb|CAX41979.1| tRNA nucleotidyltransferase, mitochondrial precursor, putative
[Candida dubliniensis CD36]
Length = 547
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 153/438 (34%), Positives = 237/438 (54%), Gaps = 54/438 (12%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFN------LETVLRVAGGWVRDKLLGKDCYDIDIAL 119
V + I LT TE I + L+ ++N LE LR+ GGWVRDKLLG + +DIDIA+
Sbjct: 21 VSNSIVLTTTEENIRNVLVGYCDYYNKTNNDSLE--LRITGGWVRDKLLGNESHDIDIAV 78
Query: 120 DNMMGSEFATKVAEYL-SATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
+++ G EF + +YL E + + I NP++SKHLET T KL+ + IDFVNLR
Sbjct: 79 NHLTGEEFVNGLHDYLRQHEPELSMNHVHTIKMNPEKSKHLETCTTKLFGVDIDFVNLRS 138
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E+Y+ +SR+P++ FGT E+DA RRD T+N+LFYN+N +ED T RG++DL++G + TPL
Sbjct: 139 EEYTHDSRVPSIEFGTPEQDAVRRDATLNALFYNLNQGQIEDYTKRGLSDLQNGILKTPL 198
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P TFLDDPLR++R IRF ++F+F+++ E A + K+AL+ KIS+ER+ E+ +
Sbjct: 199 APIKTFLDDPLRIIRLIRFASKFNFVVESETLNAMKEEHNKSALSTKISKERIEIELRKI 258
Query: 299 VSGNQPVKAMTHICGLTLFWIVFKLP---LQVEPEVLEGCEMFCTAYLDAAW----DLTQ 351
++ N P + I + L +F +P + + E LE +++ A + Q
Sbjct: 259 LTSNNPGYGLQLINYVDLASSIFYVPELAKEFDNESLEQARSQLARHIEIASLIYPNFKQ 318
Query: 352 LIGSST-----------FNDDQRRLSQYAALFLPFRNT-TYKDNKGKKIPVVNYTFRDSL 399
I +ST NDD + + + + P+ N ++K N+ + N R L
Sbjct: 319 TIMNSTEKFKKEFSALMANDDYKSVFWLSVILHPYTNVKSHKPNRD----IFNQYLRLGL 374
Query: 400 KRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFL 459
K SD V I+ +N + S+ L P+ K R G
Sbjct: 375 TSKKSDIAKVSAIN--------------------MNSAELSR-LFSAPELVK-RSDIGLY 412
Query: 460 LREIKKFWRVALLISTLL 477
LR+ +F + L+++ LL
Sbjct: 413 LRKFPEFASLNLIVNALL 430
>gi|448086984|ref|XP_004196227.1| Piso0_005676 [Millerozyma farinosa CBS 7064]
gi|359377649|emb|CCE86032.1| Piso0_005676 [Millerozyma farinosa CBS 7064]
Length = 574
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 122/263 (46%), Positives = 166/263 (63%), Gaps = 6/263 (2%)
Query: 65 QVRDKIELTDTETKIFSCLLNTLRHFNLET------VLRVAGGWVRDKLLGKDCYDIDIA 118
+ +KI L + E+K+ LL H+N +R+ GGWVRDKLLGK +D+DIA
Sbjct: 36 HIDNKINLNENESKLRGLLLKFCNHYNESAPREEKLEVRITGGWVRDKLLGKQSHDLDIA 95
Query: 119 LDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
L+N+ G EFA ++ +YL I SNP++SKHLET T ++ IDFVNLR
Sbjct: 96 LNNLSGEEFADELLKYLEKNEPQYIFKRNTIKSNPEKSKHLETCTARVMGFDIDFVNLRS 155
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E+YSE+SR+P + GTAEEDA+RRD T+N+LFYNIN VED T +G+ DL++G + TPL
Sbjct: 156 ENYSEHSRVPQIECGTAEEDAFRRDATLNALFYNINHDMVEDFTRKGLDDLRNGILRTPL 215
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P TFLDDPLRVLR IRF +RF+F +D+ +A E++ AL KISRERVG E+
Sbjct: 216 DPLQTFLDDPLRVLRLIRFASRFNFKIDDSTFEAMKKPEIRTALIHKISRERVGDELAKT 275
Query: 299 VSGNQPVKAMTHICGLTLFWIVF 321
++ + + I L +F
Sbjct: 276 LTSDHVEYGLNLIASANLVSCIF 298
>gi|159109517|ref|XP_001705023.1| tRNA-nucleotidyltransferase, putative [Giardia lamblia ATCC 50803]
gi|157433100|gb|EDO77349.1| tRNA-nucleotidyltransferase, putative [Giardia lamblia ATCC 50803]
Length = 536
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/252 (48%), Positives = 168/252 (66%), Gaps = 10/252 (3%)
Query: 65 QVRDKIELTDTETKIFSCLLNTLRHFNLE-TVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
Q+ I++T++E ++F+ LL + N + T LRVAGGWVRDKLLG + +DIDIA+DNM
Sbjct: 11 QLSTSIQVTESEARLFNTLLAAIASVNKQDTTLRVAGGWVRDKLLGYESHDIDIAVDNMT 70
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G E T + EY+++ GET GV+ NP++SKHLETA + + +D VNLR E Y E
Sbjct: 71 GVELGTIINEYITSQGETVHK-MGVVSQNPEKSKHLETACITVCGYDVDLVNLRAESYQE 129
Query: 184 NSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKA 242
SR+P+ ++FG+ EDA RRD T+N+LFYNINT +ED TG+G+ADLK I TPL
Sbjct: 130 TSRVPSAIKFGSPHEDALRRDFTVNALFYNINTREIEDFTGQGLADLKSRLIRTPLDYNI 189
Query: 243 TFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN 302
TF DDPLR+LRAIRF R F LD+++ +A S E+ A L +SR+R E+ ++SG
Sbjct: 190 TFYDDPLRILRAIRFSKRLGFELDKKMYQAVESKELTARLQI-VSRQRYNKELIEILSGE 248
Query: 303 QPVKAMTHICGL 314
T +CGL
Sbjct: 249 ------TALCGL 254
>gi|365983338|ref|XP_003668502.1| hypothetical protein NDAI_0B02240 [Naumovozyma dairenensis CBS 421]
gi|343767269|emb|CCD23259.1| hypothetical protein NDAI_0B02240 [Naumovozyma dairenensis CBS 421]
Length = 662
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/266 (45%), Positives = 169/266 (63%), Gaps = 17/266 (6%)
Query: 70 IELTDTETKIFSCLLNTLRHFN-------LETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
I LT E I L + H+N +E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 120 INLTPIEKNICKLLNDYTLHYNELHKHTTVEPLTLRITGGWVRDKLLGQSSHDLDIAINI 179
Query: 122 MMGSEFATKVAEYLSATGE---TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G FA + ++L+ + P I NP +SKHLETAT KL+ + +DFVNLR
Sbjct: 180 MSGESFAMGLNDFLNKHYQRYGIKPHSIHKIDKNPAKSKHLETATTKLFGVEVDFVNLRA 239
Query: 179 EDYSENSRIPTM-RFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTP 237
E+Y+E SRIP M +FGT EDA RRD T+N+LFYNI + +ED T G+ DLK G + TP
Sbjct: 240 EEYTELSRIPIMTKFGTPLEDALRRDATLNALFYNIQKNKIEDFTQMGLKDLKMGILRTP 299
Query: 238 LPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDL 297
LPP+ TFLDDPLRVLR IRF +RF+F +DE+++K E+ A +KISRER+G E++
Sbjct: 300 LPPRKTFLDDPLRVLRLIRFASRFNFKIDEKVQKEMNDHEINVAFNSKISRERIGVEMEK 359
Query: 298 MVSGNQPVKAM-----THICGLTLFW 318
+++G P+ + H+ + FW
Sbjct: 360 ILNGPNPLLGLDLIQKNHLDNVIFFW 385
>gi|336265884|ref|XP_003347712.1| hypothetical protein SMAC_03810 [Sordaria macrospora k-hell]
gi|380091246|emb|CCC11103.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 602
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 159/243 (65%), Gaps = 10/243 (4%)
Query: 88 RHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT------GET 141
++ N +LR AGGWVRDKLLG + +DID+A++NM G FA ++ +Y A
Sbjct: 105 KNVNEPVILRWAGGWVRDKLLGTESHDIDVAINNMTGEAFALRLRDYCDADPAHRERHSI 164
Query: 142 APSGFG---VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEED 198
P G I NPD+SKHLET T+KL+ L +DFVNLR E Y+E+SR P + FGTAEED
Sbjct: 165 GPQDVGNLHKIARNPDKSKHLETTTIKLFGLDVDFVNLRKETYTEDSRNPQVEFGTAEED 224
Query: 199 AYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFG 258
A RRD T+N+LFYN++T VED TG G+ D+ I TPL P TF+DDPLRVLR IRF
Sbjct: 225 ALRRDATVNALFYNLHTGKVEDFTG-GMKDMDRKLIRTPLEPLQTFMDDPLRVLRLIRFA 283
Query: 259 ARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFW 318
+R F +DEE K + V AL KISRER+G E++ M+ G P+ ++T+I L L+
Sbjct: 284 SRLGFTIDEEAKAVMGDERVLEALKLKISRERIGVELEKMLKGPDPLSSLTYINDLNLYH 343
Query: 319 IVF 321
+F
Sbjct: 344 TLF 346
>gi|159478320|ref|XP_001697252.1| tRNA-nucleotidyltransferase, mitochondrial [Chlamydomonas
reinhardtii]
gi|158274726|gb|EDP00507.1| tRNA-nucleotidyltransferase, mitochondrial [Chlamydomonas
reinhardtii]
Length = 200
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/199 (59%), Positives = 143/199 (71%), Gaps = 2/199 (1%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
LTD E +IF LL +R T LR AGGWVRDKLLG+ DIDIALD+ +G +FA V
Sbjct: 1 LTDQEREIFDTLLAAVRQAGSSTTLRCAGGWVRDKLLGRGSDDIDIALDDCLGKDFAELV 60
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
++L + G A VI SNPDQSKHLETA MK+ ++W+D VNLR E Y+ +SRIPTM
Sbjct: 61 NDWLKSQGREARHA-AVIHSNPDQSKHLETARMKVGEVWLDLVNLRSETYAADSRIPTMT 119
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSS-VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLR 250
FGT ++DA RRD TIN+LFYNI+ VEDLTGRG+ DL+ G I TPLPP TFLDDPLR
Sbjct: 120 FGTPQQDALRRDFTINALFYNISAGGVVEDLTGRGLQDLRDGLIRTPLPPMETFLDDPLR 179
Query: 251 VLRAIRFGARFDFILDEEL 269
VLRA+RFG RF F L ++
Sbjct: 180 VLRAVRFGTRFGFQLHPDI 198
>gi|320591774|gb|EFX04213.1| tRNA nucleotidyltransferase [Grosmannia clavigera kw1407]
Length = 539
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 178/305 (58%), Gaps = 18/305 (5%)
Query: 41 TRNLGFLRCKATMSEQEPPRPVVVQVRD-KIELTDTETKIFSCLLNTL--------RHFN 91
+R G C ++++ P+ + KIELT+ E ++ LL+ R
Sbjct: 6 SRGFGDSACAGEQAKRQRPQTADKTAMELKIELTEREKRLERLLLDVAAFVDGGADRQGT 65
Query: 92 LETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSG------ 145
VLR AGGWVRD+LLG++ +DID A+D M G FA K+ E+ A G
Sbjct: 66 QPLVLRWAGGWVRDRLLGRESHDIDTAIDTMTGFAFALKMQEFCGMAANAARHGMEPRDL 125
Query: 146 --FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRD 203
+ +NPD+SKHLETAT++++D+ +DFVNLR E Y+ SR P + FGT EEDA RRD
Sbjct: 126 GSLHKVEANPDKSKHLETATVRIFDMEVDFVNLRRETYTAESRNPLVEFGTPEEDALRRD 185
Query: 204 LTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDF 263
T+N+LFYN+N +VED TG G+AD++ I TPL P TF DDPLRVLR +RF +R F
Sbjct: 186 ATVNALFYNLNCGTVEDFTG-GVADMEARLIRTPLQPLQTFTDDPLRVLRLVRFASRLQF 244
Query: 264 ILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
+D + A V AL KISRERVGTE++ M+ GN P ++ I L L+ +F
Sbjct: 245 RIDPAAEAVMADPSVLQALQQKISRERVGTEVEKMLKGNHPRDSLQLIDRLGLYHAIFTD 304
Query: 324 PLQVE 328
P +
Sbjct: 305 PAHAD 309
>gi|342885062|gb|EGU85171.1| hypothetical protein FOXB_04286 [Fusarium oxysporum Fo5176]
Length = 1082
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 227/439 (51%), Gaps = 29/439 (6%)
Query: 58 PPR--PVVVQVRDKIELTDTETKIFSCLLNTLRHFNLE------TVLRVAGGWVRDKLLG 109
PP P V I+LT E ++ LL+ + + VLR AGGWVRDKLL
Sbjct: 44 PPAKVPKSNMVTTTIQLTSKEQQLRHLLLDVAKDIDESGKAPEPIVLRWAGGWVRDKLLN 103
Query: 110 KDCYDIDIALDNMMGSEFATKVAEYLS-----ATGETAPSGFGV---IPSNPDQSKHLET 161
+DID+A++ M G FA + +Y + P+ G + NP++SKHLET
Sbjct: 104 IQSHDIDVAINAMTGVPFAQAMCDYCERPEAMSKHNIGPADIGSLHNVARNPEKSKHLET 163
Query: 162 ATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDL 221
A +K++ L +DFVNLR E Y+E+SR P M FGTAEEDA RRD T+N+LFYN++ VED
Sbjct: 164 AMVKMFGLDLDFVNLRKETYTEDSRNPQMEFGTAEEDARRRDATVNALFYNLHDDRVEDF 223
Query: 222 TGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAA 281
TG G+AD++ I TPL P TF+DDPLRVLR +RF +R FI+D +K A +V A
Sbjct: 224 TG-GLADMEAKIIRTPLEPFQTFMDDPLRVLRLVRFSSRLQFIIDANTRKFMADPKVLEA 282
Query: 282 LAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVE---PEVLEGCEMF 338
L AKISRERVG E++ M+ G+ P +A+ I L LF +F P Q P++ +
Sbjct: 283 LRAKISRERVGVELEKMLKGDHPFEALQLIHELQLFHAIFTDPTQENLPVPDISRWAVAY 342
Query: 339 -CTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTTYKDN---KGKKIPVVNYT 394
C L D T + G + D + A P+ N K +P+V
Sbjct: 343 TCLDELLNDRDSTSIAGRLITSTDATYSAWNLAALSPWMTVEEPPNPRRKANALPLVAIV 402
Query: 395 FRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKEL--VDVPDAS-K 451
R+ K + V HR ++ L L ++ + E ++ + D P + +
Sbjct: 403 SREGFKAPNRLSSIVAASHRNRDEILELKHAVCNGESYIQERDRFGMAIRKWDTPAGTWR 462
Query: 452 LRVLTGFLLREIKKF--WR 468
L+VL L+ ++ WR
Sbjct: 463 LQVLNALLVEALETLTEWR 481
>gi|367008348|ref|XP_003678674.1| hypothetical protein TDEL_0A01310 [Torulaspora delbrueckii]
gi|359746331|emb|CCE89463.1| hypothetical protein TDEL_0A01310 [Torulaspora delbrueckii]
Length = 548
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 160/230 (69%), Gaps = 3/230 (1%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS---ATGETAPSGFGVIPS 151
LR++GGWVRDK+LG+D +D+DI+++ M G +FA +++ +++ + P I
Sbjct: 63 ALRISGGWVRDKILGRDSHDLDISINIMSGEQFALQLSRFVTDNFSKYGIKPHSIHKIDI 122
Query: 152 NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFY 211
NP +SKHLETAT KL+ + +DFVNLR E+YS +SRIP +FGTAEEDA RRD T+N+LFY
Sbjct: 123 NPAKSKHLETATTKLFGVEVDFVNLRSEEYSNHSRIPVTKFGTAEEDALRRDATLNALFY 182
Query: 212 NINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
NI + VED T G+ DLK+G + TPLPP+ TFLDDPLRVLR IRF +R+ F +D+E+
Sbjct: 183 NIQENKVEDFTKMGLRDLKNGILRTPLPPRQTFLDDPLRVLRLIRFASRYSFRIDDEVLN 242
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
E+ AA + K+S ER+GTE++ ++ G+ P+ + I + IVF
Sbjct: 243 EMRDPEINAAFSTKVSNERIGTEVEKILDGSNPLLGLALIQKTKIENIVF 292
>gi|358057420|dbj|GAA96769.1| hypothetical protein E5Q_03440 [Mixia osmundae IAM 14324]
Length = 2025
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 199/341 (58%), Gaps = 28/341 (8%)
Query: 80 FSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL---- 135
F LL T R LRVAGGWVRDKLLG D+DI+ ++ G +FA EYL
Sbjct: 247 FCTLLRTQRSDLPPIELRVAGGWVRDKLLGLPSSDLDISTSSVTGFQFAQLFIEYLHSLP 306
Query: 136 --SATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRF 192
ATG P+ I +NPDQSKHLETA LY L IDFV LR E+Y SRIP+ + F
Sbjct: 307 RTDATGSKPPT-IAKIEANPDQSKHLETAKTTLYGLEIDFVQLRSEEYGSASRIPSEVVF 365
Query: 193 GTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVL 252
GT +DA RRD+TIN+LFYN++T VED TG+G+ DL+ G+I TPL P TF+DDPLRVL
Sbjct: 366 GTPLQDALRRDITINTLFYNVHTRQVEDHTGKGLDDLRAGRIRTPLEPSQTFMDDPLRVL 425
Query: 253 RAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
R +RFG+RF + LD + A ++ ++ A+ ++S+ERVG E+D M+ +P+ A +
Sbjct: 426 RCVRFGSRFGYTLDPSIVAAVKTETIREAVRTRVSKERVGIELDKMLKAAEPLHAFEIMD 485
Query: 313 GLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRL-----SQ 367
L L ++F P ++ V E+ + L AA L Q++ QRRL S
Sbjct: 486 QLDLLPVIFSFPRELAITV---NELENVSVLAAARYLRQVLEQP---GPQRRLLETIRSD 539
Query: 368 YAAL--------FLPFRNTTYKDNKGKKIPVVNYTFRDSLK 400
AL +PFR++++++ K K + +V+ LK
Sbjct: 540 SIALKKLWLAISLIPFRHSSFQE-KNKTVALVDRAIGYCLK 579
>gi|302779736|ref|XP_002971643.1| hypothetical protein SELMODRAFT_25836 [Selaginella moellendorffii]
gi|300160775|gb|EFJ27392.1| hypothetical protein SELMODRAFT_25836 [Selaginella moellendorffii]
Length = 197
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 146/199 (73%), Gaps = 5/199 (2%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
+RVAGGWVRDKLLG + +D+DIALD+M G +F +V L T + + VI SNP++
Sbjct: 1 VRVAGGWVRDKLLGVESHDLDIALDDMTGQQFCDRVVPCLRKTDPSC--SYKVIKSNPER 58
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFYNIN 214
SKHLET +++ ID VNLR E YS +SRIPT M+FGT EDAYRRDLTINSLFYN+
Sbjct: 59 SKHLETTKLEILGGEIDVVNLRSETYSNDSRIPTSMKFGTPSEDAYRRDLTINSLFYNVA 118
Query: 215 TSSVEDLTGRG--IADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
VED TGRG + DLK GKI TPL P TFLDDPLRVLR+IRF ARF+F LDEEL+
Sbjct: 119 ADKVEDFTGRGLCVTDLKLGKIRTPLSPLVTFLDDPLRVLRSIRFAARFNFELDEELECV 178
Query: 273 AASDEVKAALAAKISRERV 291
A++D VKAA KI+RER+
Sbjct: 179 ASADSVKAAFKTKITRERI 197
>gi|393218721|gb|EJD04209.1| hypothetical protein FOMMEDRAFT_155333 [Fomitiporia mediterranea
MF3/22]
Length = 566
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 229/429 (53%), Gaps = 53/429 (12%)
Query: 61 PVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETV-----LRVAGGWVRDKLLGKDCYDI 115
P+ V + +++LT TE ++ + LL+ + NLE+ R++GGWVRDKLLG DI
Sbjct: 15 PIPVPTKLEVKLTPTEDQLCT-LLDECKQ-NLESKGQNVECRISGGWVRDKLLGAQSNDI 72
Query: 116 DIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVN 175
D+AL N+MG FA + E++ A+ I NP+QSKHLETA + +DFVN
Sbjct: 73 DVALTNIMGVSFAEQFVEFV-ASKNLPVKTVATIARNPEQSKHLETARTTVLSTELDFVN 131
Query: 176 LRCEDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKI 234
LR E Y++NSRIPT ++ GT EDA RRD TIN+LFYN+++ SVED T +G+ DL+ G +
Sbjct: 132 LRSESYADNSRIPTEIKLGTPLEDALRRDATINALFYNVHSRSVEDFTEKGLDDLRKGVL 191
Query: 235 VTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTE 294
TP+ P TF DDPLRV+R IRF +R F + +E++++ + E++AA+ +KIS+ER+G E
Sbjct: 192 RTPMDPFETFKDDPLRVIRCIRFASRLGFKMVKEMEESMQNTEIQAAIVSKISKERIGEE 251
Query: 295 IDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIG 354
+D M+ G P+ ++ I L L+ + +PL + +A A L
Sbjct: 252 LDKMMKGRDPLHSIRLITSLNLYSSITAVPLAIASTFSPSLSPPSSAI--GAATLLHAAL 309
Query: 355 SSTFND------------DQRRLSQ-------YAALFLPFRNTTYKDNKGKKI-PVVNYT 394
S++F+D Q + + AAL P+ N Y K K P V
Sbjct: 310 SNSFSDTLHLPPPHPLLLSQLEIDKTLRPRFFLAALMTPYANVQYTPKKKKSTAPAVEVV 369
Query: 395 FRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDV--KVNDGQWSKELVDVPDASKL 452
R+ LK + + +P+L +A +V V+ Q+ D SK
Sbjct: 370 IREGLKLGLQN------------HYADGVPALFAAANVLRGVDASQF--------DGSKE 409
Query: 453 RVLTGFLLR 461
R G LLR
Sbjct: 410 RSRIGLLLR 418
>gi|326431434|gb|EGD77004.1| hypothetical protein PTSG_07347 [Salpingoeca sp. ATCC 50818]
Length = 560
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/258 (44%), Positives = 165/258 (63%), Gaps = 1/258 (0%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
+I LTD E ++F+ L++ ++ F+L+ LRVAGGWVRDKLLG++ DIDI D++ GS+ A
Sbjct: 17 RIRLTDLEHRVFALLIDVVQRFHLKDTLRVAGGWVRDKLLGRESLDIDITTDSLSGSDLA 76
Query: 129 TKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
+ + L E + F ++P P+QS HL+ +T+KLYDL ID LR E Y SRIP
Sbjct: 77 LHIEQLLKEKNEKDAARFKILPV-PEQSAHLQVSTIKLYDLEIDLNALRTEVYDPESRIP 135
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
+ GT ED RRD TIN+L+YNIN ++ED T G++DL G + TP P +F +DP
Sbjct: 136 KVSPGTILEDTARRDFTINALYYNINQDAIEDFTDTGLSDLDLGLVRTPADPLRSFKEDP 195
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LRVLRAIR+ R+ F L++ + A +VK L K+SRER G E+D M + P+ +
Sbjct: 196 LRVLRAIRYTGRYGFKLEDAARHAILDPQVKECLQTKVSRERYGIEVDKMFKADHPLACL 255
Query: 309 THICGLTLFWIVFKLPLQ 326
+ +C L L+ +VF P +
Sbjct: 256 SLLCNLGLYDVVFHSPAE 273
>gi|255718757|ref|XP_002555659.1| KLTH0G14432p [Lachancea thermotolerans]
gi|238937043|emb|CAR25222.1| KLTH0G14432p [Lachancea thermotolerans CBS 6340]
Length = 519
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 165/262 (62%), Gaps = 9/262 (3%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNM 122
K++LT+TE +I ++ N R + LR+ GGWVRDKLLG + +D+DIA++ M
Sbjct: 17 KLKLTETEQQICRLLKDYTSEYNKSRALSEPLELRITGGWVRDKLLGFNSHDLDIAVNTM 76
Query: 123 MGSEFATKVAEYLSATGETA---PSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCE 179
G + A ++ ++L E+ P I NP++SKHLETAT KL+ + +DFVNLR E
Sbjct: 77 SGEQLALEINDFLRRNHESCGITPHSIHKIDKNPEKSKHLETATTKLFGIDVDFVNLRSE 136
Query: 180 DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP 239
+Y+ SRIP + FGT ++DA RRD T+N+LFYNI +ED TG G+ DL G + TPLP
Sbjct: 137 EYTTESRIPVVAFGTPKQDALRRDATLNALFYNIQNDEIEDFTGTGLEDLNKGILRTPLP 196
Query: 240 PKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
P TFLDDPLRVLR IRF +R F++D + KA E+ A KISRERVG E+ ++
Sbjct: 197 PLQTFLDDPLRVLRLIRFASRLGFVIDPDTYKAMQDPEINKAFGIKISRERVGVEMQKIL 256
Query: 300 SGNQPVKAMTHICGLTLFWIVF 321
G P+ ++ I L ++F
Sbjct: 257 QGPNPLLGLSFIQKAGLDNVIF 278
>gi|253745016|gb|EET01131.1| tRNA-nucleotidyltransferase, putative [Giardia intestinalis ATCC
50581]
Length = 529
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/265 (47%), Positives = 170/265 (64%), Gaps = 4/265 (1%)
Query: 65 QVRDKIELTDTETKIFSCLLNTLRHFN-LETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
QV I++T+ E ++F LL+ L N +T LRVAGGWVRDKLLG + +DIDIA+DNM
Sbjct: 11 QVSASIQVTENEARLFDTLLDALALANKHDTTLRVAGGWVRDKLLGYESHDIDIAVDNMT 70
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G E T + EY+ + G+ GV+ NP++SKHLETA + + +D VNLR E Y E
Sbjct: 71 GVELGTLINEYILSRGDIVHK-MGVVSQNPEKSKHLETACITVCGYDVDLVNLRAESYQE 129
Query: 184 NSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKA 242
+SR+P+ + FGT EDA RRD TIN+LFYNI+T +ED T GI DL++G I TPL
Sbjct: 130 DSRVPSAVVFGTPYEDALRRDFTINALFYNIHTKEIEDFTEHGIIDLQNGLIRTPLDCNI 189
Query: 243 TFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN 302
TF DDPLR+LRAIRF R DF LDE++ +AA + E+ A L +SR+R E+ ++SG
Sbjct: 190 TFYDDPLRILRAIRFSNRLDFKLDEKMYQAAENKELTARLQI-VSRQRYNKELAEILSGE 248
Query: 303 QPVKAMTHICGLTLFWIVFKLPLQV 327
+ + + +F VF L V
Sbjct: 249 NALSGFQGLFDMHVFEEVFLRILNV 273
>gi|39979137|emb|CAE85511.1| related to tRNA nucleotidyltransferase [Neurospora crassa]
Length = 599
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 158/243 (65%), Gaps = 10/243 (4%)
Query: 88 RHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT------GET 141
++ N +LR AGGWVRDKLLG + DID+A++NM G FA ++ +Y A
Sbjct: 104 KNVNEPVILRWAGGWVRDKLLGTESNDIDVAINNMTGEAFALRLRDYCDADPAHRERHSI 163
Query: 142 APSGFG---VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEED 198
P+ G I NPD+SKHLET T+KL+ L +D VNLR E Y+E+SR P + FGTAEED
Sbjct: 164 GPADVGNLHKIARNPDKSKHLETTTIKLFGLDVDLVNLRKETYTEDSRHPQVEFGTAEED 223
Query: 199 AYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFG 258
A RRD T+N+LFYN++T VED TG G+ D++ I TPL P TF+DDPLRVLR IRF
Sbjct: 224 ALRRDATVNALFYNLHTGKVEDFTG-GMKDMERKLIRTPLEPLQTFMDDPLRVLRLIRFA 282
Query: 259 ARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFW 318
R F +DEE K + V AL KISRERVG E++ M+ G P ++T+I L+L+
Sbjct: 283 CRLGFTIDEETKAVMGDERVLEALKLKISRERVGVELEKMLKGPDPFSSLTYINNLSLYH 342
Query: 319 IVF 321
+F
Sbjct: 343 TLF 345
>gi|336471363|gb|EGO59524.1| hypothetical protein NEUTE1DRAFT_109031 [Neurospora tetrasperma
FGSC 2508]
gi|350292460|gb|EGZ73655.1| hypothetical protein NEUTE2DRAFT_59445 [Neurospora tetrasperma FGSC
2509]
Length = 599
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/243 (50%), Positives = 158/243 (65%), Gaps = 10/243 (4%)
Query: 88 RHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT------GET 141
++ N +LR AGGWVRDKLLG + DID+A++NM G FA ++ +Y A
Sbjct: 104 KNVNEPVILRWAGGWVRDKLLGTESNDIDVAINNMTGEAFALRLRDYCDADPAHRERHSI 163
Query: 142 APSGFG---VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEED 198
P+ G I NPD+SKHLET T+KL+ L +D VNLR E Y+E+SR P + FGTAEED
Sbjct: 164 GPADVGNLHKIARNPDKSKHLETTTIKLFGLDVDLVNLRKETYTEDSRHPQVEFGTAEED 223
Query: 199 AYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFG 258
A RRD TIN+LFYN++T VED TG G+ D++ I TPL P TF+DDPLRVLR IRF
Sbjct: 224 ALRRDATINALFYNLHTGKVEDFTG-GMKDMERKLIRTPLEPLQTFMDDPLRVLRLIRFA 282
Query: 259 ARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFW 318
R F +DEE K + V AL KISRERVG E++ M+ G P ++T+I L+L+
Sbjct: 283 CRLGFTIDEETKAVMGDERVLEALKLKISRERVGVELEKMLKGPDPFSSLTYINDLSLYH 342
Query: 319 IVF 321
+F
Sbjct: 343 TLF 345
>gi|164423663|ref|XP_962692.2| hypothetical protein NCU08022 [Neurospora crassa OR74A]
gi|157070187|gb|EAA33456.2| hypothetical protein NCU08022 [Neurospora crassa OR74A]
Length = 541
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 158/243 (65%), Gaps = 10/243 (4%)
Query: 88 RHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT------GET 141
++ N +LR AGGWVRDKLLG + DID+A++NM G FA ++ +Y A
Sbjct: 46 KNVNEPVILRWAGGWVRDKLLGTESNDIDVAINNMTGEAFALRLRDYCDADPAHRERHSI 105
Query: 142 APSGFG---VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEED 198
P+ G I NPD+SKHLET T+KL+ L +D VNLR E Y+E+SR P + FGTAEED
Sbjct: 106 GPADVGNLHKIARNPDKSKHLETTTIKLFGLDVDLVNLRKETYTEDSRHPQVEFGTAEED 165
Query: 199 AYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFG 258
A RRD T+N+LFYN++T VED TG G+ D++ I TPL P TF+DDPLRVLR IRF
Sbjct: 166 ALRRDATVNALFYNLHTGKVEDFTG-GMKDMERKLIRTPLEPLQTFMDDPLRVLRLIRFA 224
Query: 259 ARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFW 318
R F +DEE K + V AL KISRERVG E++ M+ G P ++T+I L+L+
Sbjct: 225 CRLGFTIDEETKAVMGDERVLEALKLKISRERVGVELEKMLKGPDPFSSLTYINNLSLYH 284
Query: 319 IVF 321
+F
Sbjct: 285 TLF 287
>gi|344300411|gb|EGW30732.1| hypothetical protein SPAPADRAFT_142212 [Spathaspora passalidarum
NRRL Y-27907]
Length = 564
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 172/271 (63%), Gaps = 13/271 (4%)
Query: 60 RPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLET--------VLRVAGGWVRDKLLGKD 111
RPV D I LT E ++ L+ ++N + LR+ GGWVRDKLLG +
Sbjct: 28 RPVC----DYITLTAPERRVRELLVEYCNYYNTQNGIGEEDQLELRITGGWVRDKLLGNE 83
Query: 112 CYDIDIALDNMMGSEFATKVAEYLSA-TGETAPSGFGVIPSNPDQSKHLETATMKLYDLW 170
+DIDIA++++ G +FA +++Y+S + I NPD+SKHLET T KLY +
Sbjct: 84 SHDIDIAVNHLTGEQFAHGLSDYVSKYQPDLDMHTLHTIKKNPDKSKHLETCTTKLYGID 143
Query: 171 IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLK 230
IDFVNLR E+YS +SR+P + FGT +EDA RRD T+N+LFYN+N S +ED TG+G+ DL
Sbjct: 144 IDFVNLRSEEYSLDSRVPVIEFGTPQEDALRRDATLNALFYNLNHSKIEDFTGKGLEDLH 203
Query: 231 HGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRER 290
HG + TPLPP TFLDDPLR++R IRF ++F+F+++++ A + K AL+ KIS+ER
Sbjct: 204 HGLLRTPLPPIQTFLDDPLRIIRLIRFASKFNFMIEQKTLCAMKEEHNKIALSTKISKER 263
Query: 291 VGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ E+ +++ P + I + L +F
Sbjct: 264 IEIELRKILTSKNPGYGLQLINYIGLARSIF 294
>gi|378727548|gb|EHY54007.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Exophiala
dermatitidis NIH/UT8656]
Length = 517
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 158/432 (36%), Positives = 217/432 (50%), Gaps = 54/432 (12%)
Query: 70 IELTDTETKIFSCLLNTLRHFN-----LETVLRVAGGWVRDKLLGKDCYDIDIALDNMMG 124
I LT E CLL+ + VLR GGWVRDKLLG +DID+AL M G
Sbjct: 7 ISLTPAEKLFRQCLLDCRGSMQSVPGMKDLVLRFTGGWVRDKLLGTQSHDIDVALSTMTG 66
Query: 125 SEFATKVAEYLSATGE------------TAPSGFGVIPSNPDQSKHLETATMKLYDLWID 172
+F + E++ + G +A I +NP++SKHLET T +++ + +D
Sbjct: 67 WQFGLAMQEFMRSHGSYYEQEAERQGIPSAVKDIHKIEANPEKSKHLETITTRMFGIDVD 126
Query: 173 FVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHG 232
FVNLR E Y E SR PTM FGT EEDA RRD T+N+LFYN++T VED TGRG+ D+K
Sbjct: 127 FVNLRKEVYDETSRNPTMEFGTPEEDALRRDATVNALFYNLDTQLVEDFTGRGLEDMKQK 186
Query: 233 KIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVG 292
I TPL P TF DDPLRVLR IRF R + +D E ++A + AL KISRERVG
Sbjct: 187 IIRTPLAPYQTFKDDPLRVLRLIRFACRLGYEIDHEAREAMKDKTIHEALRIKISRERVG 246
Query: 293 TEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQ- 351
EI+ ++ G P + I L L+ VF P E E + + A+D +
Sbjct: 247 VEINKIMDGPDPYTGLKDINDLGLYNTVFADPNSNE----EDADSIDPSKALRAYDGLRR 302
Query: 352 -------LIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKAS 404
L S DQR+ S + A ++P+ + + + + N + R+ +K S
Sbjct: 303 ILETKPTLCLSLRPKQDQRQ-SWFLAAYVPWADLESESSAAR---AYNAS-REGIKATNS 357
Query: 405 DAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIK 464
+ RVL++ + L P ++ L V D R G LLR+ K
Sbjct: 358 -------MSRVLKESIDLRPDILVV-------------LKAVQDDKVTRSQVGMLLRQCK 397
Query: 465 KFWRVALLISTL 476
+ WR +L S L
Sbjct: 398 EHWRAHVLYSLL 409
>gi|448528625|ref|XP_003869734.1| Cca1 protein [Candida orthopsilosis Co 90-125]
gi|380354088|emb|CCG23601.1| Cca1 protein [Candida orthopsilosis]
Length = 519
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 114/254 (44%), Positives = 166/254 (65%), Gaps = 8/254 (3%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLET-----VLRVAGGWVRDKLLGKDCYDIDIALDNMMG 124
I L++TE+KI + L++ H+N +LR+ GGWVRDKLLG D +DIDIA++ + G
Sbjct: 9 ISLSETESKIRNLLVDYCNHYNASNQDKPLILRITGGWVRDKLLGYDSHDIDIAVNRLSG 68
Query: 125 SEFATKVAEYLSATG-ETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
EF EYL + + + I NP++SKHLET T KLY + +DF+NLR E+Y+
Sbjct: 69 EEFVHNFQEYLKRKDPQFSVNHVHTIKMNPEKSKHLETCTTKLYGIDLDFINLRSEEYAH 128
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKAT 243
+SR+PT+ FGT +DA RRD T+N+LFYN+N +ED T RG+ DL++G + TPLPP T
Sbjct: 129 DSRVPTIEFGTPLQDALRRDATLNALFYNLNEEKIEDFTERGMDDLENGVLRTPLPPVKT 188
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
FLDDPLR+LR IRF ++F+F ++ E A + AL+ KIS+ER+ E+ +++ +
Sbjct: 189 FLDDPLRILRLIRFASKFNFAIEAETMDAMREKHNQQALSTKISKERIEIELRKILTSHN 248
Query: 304 PVKAMTHI--CGLT 315
P + I C L+
Sbjct: 249 PSYGLQLINYCDLS 262
>gi|62947202|gb|AAY22598.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947204|gb|AAY22599.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947206|gb|AAY22600.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947208|gb|AAY22601.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947210|gb|AAY22602.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947212|gb|AAY22603.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947214|gb|AAY22604.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947216|gb|AAY22605.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947218|gb|AAY22606.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947220|gb|AAY22607.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947222|gb|AAY22608.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947224|gb|AAY22609.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947226|gb|AAY22610.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947228|gb|AAY22611.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947230|gb|AAY22612.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947232|gb|AAY22613.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947234|gb|AAY22614.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947236|gb|AAY22615.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947240|gb|AAY22617.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947242|gb|AAY22618.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947254|gb|AAY22624.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947256|gb|AAY22625.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947258|gb|AAY22626.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947260|gb|AAY22627.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947262|gb|AAY22628.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947264|gb|AAY22629.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947266|gb|AAY22630.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947268|gb|AAY22631.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947270|gb|AAY22632.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947272|gb|AAY22633.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947276|gb|AAY22635.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947278|gb|AAY22636.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947280|gb|AAY22637.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947282|gb|AAY22638.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947284|gb|AAY22639.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947286|gb|AAY22640.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947288|gb|AAY22641.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947290|gb|AAY22642.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947292|gb|AAY22643.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947294|gb|AAY22644.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947296|gb|AAY22645.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947298|gb|AAY22646.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947300|gb|AAY22647.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947302|gb|AAY22648.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947304|gb|AAY22649.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947306|gb|AAY22650.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947308|gb|AAY22651.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947310|gb|AAY22652.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947312|gb|AAY22653.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947314|gb|AAY22654.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947316|gb|AAY22655.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947318|gb|AAY22656.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947320|gb|AAY22657.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947322|gb|AAY22658.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947324|gb|AAY22659.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947326|gb|AAY22660.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947328|gb|AAY22661.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947330|gb|AAY22662.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947332|gb|AAY22663.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947334|gb|AAY22664.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947336|gb|AAY22665.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947338|gb|AAY22666.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947340|gb|AAY22667.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947342|gb|AAY22668.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947344|gb|AAY22669.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947346|gb|AAY22670.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
Length = 263
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 122/234 (52%), Positives = 152/234 (64%), Gaps = 10/234 (4%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 149 EKYTELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVG 292
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG
Sbjct: 209 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVG 262
>gi|317038811|ref|XP_001402226.2| poly(A) polymerase [Aspergillus niger CBS 513.88]
Length = 563
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 231/444 (52%), Gaps = 54/444 (12%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLE-----------TVLRVAGGWVRDKLLGKDCYDIDIA 118
I LT E+ + S LL+ ++ + + TVLR GGWVRDKLLG D+D+
Sbjct: 44 IRLTPLESTLKSLLLDVAKYIHEKNVAEGRRDAEPTVLRFTGGWVRDKLLGVGSNDVDVG 103
Query: 119 LDNMMGSEFATKVAEY------LSATGETAPSG--------FGVIPSNPDQSKHLETATM 164
++NM G +F + EY L + P+G I +NP++SKHLET T
Sbjct: 104 INNMTGYQFGLLLKEYMDRPENLEKYRQEQPNGELKHAIASLHKIEANPEKSKHLETVTT 163
Query: 165 KLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGR 224
+++ L ID VNLR E YSE+SR P M FGTA+EDA RRD TIN+LFYN+N S VED TGR
Sbjct: 164 RIFGLDIDLVNLRKETYSEDSRNPQMEFGTAQEDAMRRDATINALFYNLNESIVEDFTGR 223
Query: 225 GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAA 284
G+ D+K I TP+ P TF DDPLRVLR IRF +R + ++ E ++A ++ + AL
Sbjct: 224 GLEDMKKEIIRTPMEPYQTFQDDPLRVLRLIRFASRLGYNIERETQEAMRNELIGEALKL 283
Query: 285 KISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLD 344
KISRERVG EI+ M+ G P A+ I L L+ +F + + + AY
Sbjct: 284 KISRERVGKEIEKMLQGPDPRGALQFIDSLGLYPTIFA---NHQDDAQADTSSWALAYNA 340
Query: 345 AAWDLTQLIGSSTFNDDQ-----RRLSQYA---ALFLPFRNTTYKDNKGKKI-PVVNYT- 394
L ++T N Q + S YA A F P+ + + +G K P+ T
Sbjct: 341 LEKILKDETNAATVNVRQFLIRDKLESYYAWVIAAFAPWSSIPSRVARGPKAKPLPARTA 400
Query: 395 --FRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKL 452
RDSL+ +D +T+ I + ++ S + ++ DG A++
Sbjct: 401 EVARDSLR---ADNKTIAVIGDAAHNWQAITDVKNSVLEGRM-DGT----------AAEA 446
Query: 453 RVLTGFLLREIKKFWRVALLISTL 476
R G +R KK WR+ +L+S L
Sbjct: 447 RQQVGLHIRSWKKDWRLCILLSIL 470
>gi|156083260|ref|XP_001609114.1| tRNA nucleotidyltransferase/poly(A) polymerase family domain
containing protein [Babesia bovis T2Bo]
gi|154796364|gb|EDO05546.1| tRNA nucleotidyltransferase/poly(A) polymerase family domain
containing protein [Babesia bovis]
Length = 461
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 228/438 (52%), Gaps = 69/438 (15%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
+I ++ E +F L + NL LRVAGGWVRDKLL + DIDIAL+++ G +F
Sbjct: 37 QIRISKQEKVLFDLLKECVDSNNLNIDLRVAGGWVRDKLLNQTSKDIDIALEHITGVDFC 96
Query: 129 TKVAEYLSATGETAPSGF----GVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSEN 184
YL+A E + GF GV+ P+QSKHLETAT+ + L IDFVNLR EDY++N
Sbjct: 97 N----YLNAFTEKS-YGFHKTVGVVKRRPEQSKHLETATINIMGLNIDFVNLRSEDYAQN 151
Query: 185 SRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATF 244
SRIP M+ GT EDA RRD TIN+LFYNI+ +++ED TG+GI DLK I T P TF
Sbjct: 152 SRIPIMKIGTPFEDAMRRDFTINALFYNISKNAIEDYTGKGIDDLKAEVIRTCSPAFGTF 211
Query: 245 LDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
LDDPLRV+RA RF AR + LD ++ K+ + EV A L+ K+++ R+ E+D M+
Sbjct: 212 LDDPLRVIRAARFAARLGYALDSDIIKSGSDPEVLAQLSQKVAKARIAQELDDML----- 266
Query: 305 VKAMTHICGLTLFWIVFK----LPLQV---------EPEVLEGCEMFCTAYLDAAWDLTQ 351
+K T TL + + K LP+ V + ++ GC+ AW + Q
Sbjct: 267 IKGDT-----TLAFEIMKTFGVLPILVRDNPGDAPSDSQIDTGCQTM-------AW-MKQ 313
Query: 352 LIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLK---RKASDAET 408
+ ++D RR+ AA +P ++ D K + + LK + AS A T
Sbjct: 314 CLAELKWDDVDRRILYIAAFCVPLKDEPQVD----KCSYTEHVIKSRLKMPNKLASGATT 369
Query: 409 VMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWR 468
V+ E FL I L A PD LR L G ++R I W+
Sbjct: 370 VIEGS---EMFLEAINKLPPAN----------------PD---LRELLGGMIRSIGPLWK 407
Query: 469 VALLISTLLYPTHVDHTE 486
AL++ VD E
Sbjct: 408 EALILCMTRESFGVDPRE 425
>gi|303314721|ref|XP_003067369.1| tRNA nucleotidyltransferase, mitochondrial precursor, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240107037|gb|EER25224.1| tRNA nucleotidyltransferase, mitochondrial precursor, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 625
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/278 (44%), Positives = 166/278 (59%), Gaps = 26/278 (9%)
Query: 70 IELTDTETKIFSCLLNTLRHFNL------------ETVLRVAGGWVRDKLLGKDCYDIDI 117
IELT E + LL+ + + + VLR GGWVRDKLLG D DID+
Sbjct: 94 IELTQIEKTLTHLLLDVVEYIKQKGAKNGDKSIPQDVVLRFTGGWVRDKLLGVDSNDIDV 153
Query: 118 ALDNMMGSEFATKVAEYLSATG--------------ETAPSGFGVIPSNPDQSKHLETAT 163
+ M G +F ++ EYL ++ G I +NP++SKHLET
Sbjct: 154 GISTMTGYKFGVELKEYLDNPEHLEKYKSFHSDDALKSVIGGLHKIEANPEKSKHLETVA 213
Query: 164 MKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG 223
K++ L +D VNLR E YS++SR P M FGTAEEDA RRD T+N+LFYN++TSSVED TG
Sbjct: 214 TKIFGLEVDLVNLRKETYSDHSRHPEMEFGTAEEDALRRDATVNALFYNLHTSSVEDFTG 273
Query: 224 RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALA 283
RGIADL+ I TPL P TF DDPLRVLR IRF +R + +D +++ D++K AL
Sbjct: 274 RGIADLRAHLIRTPLEPYQTFKDDPLRVLRLIRFSSRLGYKIDPNTEESMQHDDIKDALK 333
Query: 284 AKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
KIS+ER+G E++ M+ G P+ A+ I L L+ +F
Sbjct: 334 LKISQERIGAEVEKMLKGPDPLMALHIIERLGLYDTIF 371
>gi|171690554|ref|XP_001910202.1| hypothetical protein [Podospora anserina S mat+]
gi|170945225|emb|CAP71336.1| unnamed protein product [Podospora anserina S mat+]
Length = 567
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 176/297 (59%), Gaps = 22/297 (7%)
Query: 49 CKAT--MSEQEPP----RP-VVVQVRDKIELTDTETKIFSCLLNTLRHF------NLETV 95
C +T S PP RP V I LT+ E ++ L++ R+ N T+
Sbjct: 33 CDSTSKHSLSSPPAKKHRPYTATMVSRTITLTEQEEQLKRLLVDVARYIDSSSSENSPTI 92
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETA-----PSGFG--- 147
LR AGGWVRDKLLG +DID A++N+ G F K+ +Y+ G S G
Sbjct: 93 LRWAGGWVRDKLLGIKSHDIDTAINNLTGEAFVGKLRDYVEIPGNKQLHNLMDSDIGRLH 152
Query: 148 VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTIN 207
+ NPD+SKHLET+T+KL L +DFVNLR E Y ENSR P + FG AEEDA RRD T+N
Sbjct: 153 TVARNPDKSKHLETSTIKLCGLDVDFVNLRKETYCENSRNPEVEFGKAEEDAARRDATVN 212
Query: 208 SLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDE 267
+LFYN+ T VEDL G G+ DL G I TP+ P TF+DDPLRVLR +RF +R F +D+
Sbjct: 213 ALFYNLQTGEVEDLVG-GLPDLGAGIIRTPMEPLQTFMDDPLRVLRLVRFASRLGFKIDK 271
Query: 268 ELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
++ A + V L KISRER+G E++ M+ G PV+++ I L L+ VF +P
Sbjct: 272 AAEEVMADENVLRNLKIKISRERIGVELEKMLKGKHPVESLRLINRLGLYHAVFTVP 328
>gi|134074841|emb|CAK38955.1| unnamed protein product [Aspergillus niger]
Length = 530
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 231/444 (52%), Gaps = 54/444 (12%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLE-----------TVLRVAGGWVRDKLLGKDCYDIDIA 118
I LT E+ + S LL+ ++ + + TVLR GGWVRDKLLG D+D+
Sbjct: 11 IRLTPLESTLKSLLLDVAKYIHEKNVAEGRRDAEPTVLRFTGGWVRDKLLGVGSNDVDVG 70
Query: 119 LDNMMGSEFATKVAEY------LSATGETAPSG--------FGVIPSNPDQSKHLETATM 164
++NM G +F + EY L + P+G I +NP++SKHLET T
Sbjct: 71 INNMTGYQFGLLLKEYMDRPENLEKYRQEQPNGELKHAIASLHKIEANPEKSKHLETVTT 130
Query: 165 KLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGR 224
+++ L ID VNLR E YSE+SR P M FGTA+EDA RRD TIN+LFYN+N S VED TGR
Sbjct: 131 RIFGLDIDLVNLRKETYSEDSRNPQMEFGTAQEDAMRRDATINALFYNLNESIVEDFTGR 190
Query: 225 GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAA 284
G+ D+K I TP+ P TF DDPLRVLR IRF +R + ++ E ++A ++ + AL
Sbjct: 191 GLEDMKKEIIRTPMEPYQTFQDDPLRVLRLIRFASRLGYNIERETQEAMRNELIGEALKL 250
Query: 285 KISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLD 344
KISRERVG EI+ M+ G P A+ I L L+ +F + + + AY
Sbjct: 251 KISRERVGKEIEKMLQGPDPRGALQFIDSLGLYPTIFA---NHQDDAQADTSSWALAYNA 307
Query: 345 AAWDLTQLIGSSTFNDDQ-----RRLSQYA---ALFLPFRNTTYKDNKGKKI-PVVNYT- 394
L ++T N Q + S YA A F P+ + + +G K P+ T
Sbjct: 308 LEKILKDETNAATVNVRQFLIRDKLESYYAWVIAAFAPWSSIPSRVARGPKAKPLPARTA 367
Query: 395 --FRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKL 452
RDSL+ +D +T+ I + ++ S + ++ DG A++
Sbjct: 368 EVARDSLR---ADNKTIAVIGDAAHNWQAITDVKNSVLEGRM-DGT----------AAEA 413
Query: 453 RVLTGFLLREIKKFWRVALLISTL 476
R G +R KK WR+ +L+S L
Sbjct: 414 RQQVGLHIRSWKKDWRLCILLSIL 437
>gi|119175111|ref|XP_001239837.1| hypothetical protein CIMG_09458 [Coccidioides immitis RS]
gi|392870031|gb|EAS28580.2| poly(A) polymerase [Coccidioides immitis RS]
Length = 625
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/278 (44%), Positives = 166/278 (59%), Gaps = 26/278 (9%)
Query: 70 IELTDTETKIFSCLLNTLRHFNL------------ETVLRVAGGWVRDKLLGKDCYDIDI 117
IELT E + LL+ + + + VLR GGWVRDKLLG D DID+
Sbjct: 94 IELTQIEKTLRHLLLDVVEYIKQKGAKNGDKSIPQDVVLRFTGGWVRDKLLGVDSNDIDV 153
Query: 118 ALDNMMGSEFATKVAEYLSATG--------------ETAPSGFGVIPSNPDQSKHLETAT 163
+ M G +F ++ EYL ++ G I +NP++SKHLET
Sbjct: 154 GISTMTGYKFGVELKEYLDNPEHLEKYKSFHSDDALKSVIGGLHKIEANPEKSKHLETVA 213
Query: 164 MKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG 223
K++ L +D VNLR E YS++SR P M FGTAEEDA RRD T+N+LFYN++TSSVED TG
Sbjct: 214 TKIFGLEVDLVNLRKETYSDHSRHPEMEFGTAEEDALRRDATVNALFYNLHTSSVEDFTG 273
Query: 224 RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALA 283
RGIADL+ I TPL P TF DDPLRVLR IRF +R + +D +++ D++K AL
Sbjct: 274 RGIADLRAHLIRTPLEPYQTFKDDPLRVLRLIRFSSRLGYKIDPNTEESMQHDDIKDALK 333
Query: 284 AKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
KIS+ER+G E++ M+ G P+ A+ I L L+ +F
Sbjct: 334 LKISQERIGAEVEKMLKGPDPLMALHIIERLGLYDTIF 371
>gi|320037697|gb|EFW19634.1| tRNA nucleotidyltransferase [Coccidioides posadasii str. Silveira]
Length = 539
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/278 (44%), Positives = 166/278 (59%), Gaps = 26/278 (9%)
Query: 70 IELTDTETKIFSCLLNTLRHFNL------------ETVLRVAGGWVRDKLLGKDCYDIDI 117
IELT E + LL+ + + + VLR GGWVRDKLLG D DID+
Sbjct: 8 IELTQIEKTLRHLLLDVVEYIKQKGAKNGDKSIPQDVVLRFTGGWVRDKLLGVDSNDIDV 67
Query: 118 ALDNMMGSEFATKVAEYLSATG--------------ETAPSGFGVIPSNPDQSKHLETAT 163
+ M G +F ++ EYL ++ G I +NP++SKHLET
Sbjct: 68 GISTMTGYKFGVELKEYLDNPEHLEKYKSFHSDDALKSVIGGLHKIEANPEKSKHLETVA 127
Query: 164 MKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG 223
K++ L +D VNLR E YS++SR P M FGTAEEDA RRD T+N+LFYN++TSSVED TG
Sbjct: 128 TKIFGLEVDLVNLRKETYSDHSRHPEMEFGTAEEDALRRDATVNALFYNLHTSSVEDFTG 187
Query: 224 RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALA 283
RGIADL+ I TPL P TF DDPLRVLR IRF +R + +D +++ D++K AL
Sbjct: 188 RGIADLRAHLIRTPLEPYQTFKDDPLRVLRLIRFSSRLGYKIDPNTEESMQHDDIKDALK 247
Query: 284 AKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
KIS+ER+G E++ M+ G P+ A+ I L L+ +F
Sbjct: 248 LKISQERIGAEVEKMLKGPDPLMALHIIERLGLYDTIF 285
>gi|308158897|gb|EFO61457.1| tRNA-nucleotidyltransferase, putative [Giardia lamblia P15]
Length = 536
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/259 (46%), Positives = 164/259 (63%), Gaps = 4/259 (1%)
Query: 65 QVRDKIELTDTETKIFSCLLNTLRHFN-LETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
Q+ I +T+ E +F LL L N +T LRVAGGWVRDKLLG + +DIDIA+DNM
Sbjct: 11 QLSTSIRVTENEAHLFDTLLAALASVNKHDTTLRVAGGWVRDKLLGYESHDIDIAIDNMT 70
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G E T + EY+ + GET GV+ NP++SKHLETA + + +D VNLR E Y +
Sbjct: 71 GVELGTIINEYIMSQGETVHK-MGVVSQNPEKSKHLETACITVCGYDVDLVNLRAESYQK 129
Query: 184 NSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKA 242
SR+P +FG+ EDA RRD T+N+LFYNINT +ED TG+G+ADLK I TPL
Sbjct: 130 TSRVPNATKFGSPHEDALRRDFTVNALFYNINTREIEDFTGQGLADLKSRLIRTPLDCNI 189
Query: 243 TFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN 302
TF DDPLR+LRAIRF R F LD+++ +A S E+ A L +SR+R E+ ++SG
Sbjct: 190 TFYDDPLRILRAIRFSKRLGFELDKKMYRATESKELTARLQI-VSRQRYNKELIEILSGE 248
Query: 303 QPVKAMTHICGLTLFWIVF 321
+ + + + +F +F
Sbjct: 249 AALCGLRGLFDMHIFEEIF 267
>gi|62947238|gb|AAY22616.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947244|gb|AAY22619.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947246|gb|AAY22620.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947248|gb|AAY22621.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947250|gb|AAY22622.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947252|gb|AAY22623.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
gi|62947274|gb|AAY22634.1| tRNA nucleotidyltransferase [Saccharomyces cerevisiae]
Length = 263
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/234 (52%), Positives = 151/234 (64%), Gaps = 10/234 (4%)
Query: 69 KIELTDTETKI------FSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDIALDN 121
KI LT E I ++ L N H E + LR+ GGWVRDKLLG+ +D+DIA++
Sbjct: 29 KITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDLDIAINV 88
Query: 122 MMGSEFATKVAEYLS---ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
M G +FAT + EYL A P I NP++SKHLETAT KL+ + +DFVNLR
Sbjct: 89 MSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVDFVNLRS 148
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y E SRIP + FGT EEDA RRD T+N+LFYNI+ VED T RG+ DLK G + TPL
Sbjct: 149 EKYIELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPL 208
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVG 292
P K TFLDDPLRVLR IRF +RF+F +D E+ ++ A +KISRERVG
Sbjct: 209 PAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVG 262
>gi|403222911|dbj|BAM41042.1| tRNA nucleotidyltransferase [Theileria orientalis strain Shintoku]
Length = 603
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 214/415 (51%), Gaps = 44/415 (10%)
Query: 67 RDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSE 126
R + +T +E K+F L ++ + L+ LRV GGWVRDKLL + DID+A+ M G E
Sbjct: 140 RVTLNITGSEKKLFDLLTECVKFYELDMDLRVVGGWVRDKLLKNENKDIDVAIPKMTGME 199
Query: 127 FATKVAEYLSATGETAPSGF----GVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYS 182
F EYL+ + GF G++ P+QSKHLETATM + +DFVNLR EDY+
Sbjct: 200 FC----EYLNKFTKDN-YGFSKTVGIVKRCPEQSKHLETATMSVLGFDVDFVNLRSEDYA 254
Query: 183 ENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKA 242
+SRIP MR GT ED RRD T+N+LFYNI + +ED T +GI DL I T P
Sbjct: 255 ADSRIPVMRIGTPYEDCMRRDFTVNALFYNITKNYIEDFTTKGIEDLNQSLIRTCSEPFE 314
Query: 243 TFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN 302
TF+DDPLR +RA+RF +R +F LD +L K + +DEV AL K+SR R+ EID ++S +
Sbjct: 315 TFMDDPLRTIRAVRFSSRLNFKLDSDLVK-SINDEVLEALEHKVSRSRISQEIDNILSKS 373
Query: 303 QPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQ 362
+A + + ++ +P++ E E ++ L A L + F D +
Sbjct: 374 DIHEAFKQMYTFRMLHVLLNVPVRGE-ERVDKVSGVSEGMLSEALSLMDHVKKRNFEDVE 432
Query: 363 RRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLK---RKASDAETVMNIHRVLEKF 419
+ AAL +P R K+ V +Y ++ LK + +S A T+ N V +
Sbjct: 433 HKYLYLAALVVPTREL----GPVGKMTVADYLIKERLKLPNKYSSSANTISNGSLVFTDY 488
Query: 420 LSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLIS 474
L+ + + RV TG +R + W+ +L +S
Sbjct: 489 LNC--------------------------SERDRVSTGLAIRTVGPLWKESLAMS 517
>gi|323451929|gb|EGB07805.1| hypothetical protein AURANDRAFT_27394, partial [Aureococcus
anophagefferens]
Length = 237
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/225 (50%), Positives = 155/225 (68%), Gaps = 4/225 (1%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
+ELT E ++ L T +R+ GGWVRDK LG+ D+D+ALDN+ G+ FA
Sbjct: 15 VELTKEEAELVEVLCAAAAPTG--TTVRICGGWVRDKALGRVTKDVDVALDNVSGAAFAA 72
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE--NSRI 187
+V+E L+A G S GVI +NP+QSKHLETATM+L + +DFVNLR E Y++ ++RI
Sbjct: 73 RVSEALAARGGDRGSNIGVIAANPEQSKHLETATMRLCGIEVDFVNLRSESYADAGDTRI 132
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDD 247
PTM FGT E+DA RRD T+N+LF+N+++ ++ED T RG DL+ G + TPL P+ T LDD
Sbjct: 133 PTMTFGTPEQDALRRDFTLNALFFNVHSRAIEDYTKRGWDDLRTGIMRTPLEPRVTLLDD 192
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVG 292
PLR LR +RF +R+ F L++ A EV+AAL AK+SRERVG
Sbjct: 193 PLRALRGVRFASRYCFALEQGFVGACLLPEVRAALLAKVSRERVG 237
>gi|154276116|ref|XP_001538903.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413976|gb|EDN09341.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 543
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 159/472 (33%), Positives = 231/472 (48%), Gaps = 69/472 (14%)
Query: 53 MSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLET--------------VLRV 98
MSE+ R +V +I LT E + CLL+ VLR
Sbjct: 1 MSEE---RNMVPPAVPRITLTPVEQTLRLCLLDAAEFIQQRGNQDPASVPTAADPLVLRF 57
Query: 99 AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG-----ETAPSG-------- 145
AGGWVRDKLLG D +DID+A++ M G F + EYL G + SG
Sbjct: 58 AGGWVRDKLLGVDSHDIDVAINCMTGERFGEGLKEYLDMPGNLEKYKACHSGNPSIIDFI 117
Query: 146 -FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDL 204
I NP++SKHLETAT K++ L ID VNLR E YS++SR P + GT EEDA RRD
Sbjct: 118 KIHKIEKNPEKSKHLETATTKIFGLDIDLVNLRKETYSDDSRNPQVEIGTPEEDALRRDA 177
Query: 205 TINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFI 264
T+N+LFYNI+T ++ED TGRG+ D+++ I TPL P TF DDPLRVLR IRF +R +
Sbjct: 178 TVNALFYNIHTDTIEDFTGRGLQDMENKIIRTPLAPCQTFKDDPLRVLRLIRFASRLGYT 237
Query: 265 LDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
+D + ++A +++K AL AKI++ER+G EI+ + G P+ A+ I L L+ +F
Sbjct: 238 IDSDTEEAMKIEDIKVALKAKITQERIGVEIEKTLRGPNPLTALQRINRLGLYDTIFA-- 295
Query: 325 LQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSST--------------FNDDQRRLSQYAA 370
+ + Y A L++ G+ T N+++R + + A
Sbjct: 296 -NHQDNAGVDISHWERGYNALALLLSKSTGNITESQKTRNHVRDILIRNENERYFAWFLA 354
Query: 371 LFLPFRNTTYKDNKGKK-----IPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPS 425
P+ T D K K +P RDSL+ A + + + S
Sbjct: 355 ALAPW--TIVADPKPSKSSNPLVPRATTVARDSLRADNRAAGIISAASKNYRMIWDVKSS 412
Query: 426 LVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLL 477
+ E+ D P +++RV G +R + WR+ +++ LL
Sbjct: 413 FL------------KNEIADTP--AEMRVKMGQFIRSLSHDWRLCFVLAILL 450
>gi|350631884|gb|EHA20253.1| ATP :tRNA-specific tRNA nucleotidyltransferase [Aspergillus niger
ATCC 1015]
Length = 1065
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 163/446 (36%), Positives = 231/446 (51%), Gaps = 58/446 (13%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLE-----------TVLRVAGGWVRDKLLGKDCYDIDIA 118
I LT E+ + S LL+ ++ + + TVLR GGWVRDKLLG D+D+
Sbjct: 11 IRLTPLESTLKSLLLDVAKYIHEKNVAEGRRDAEPTVLRFTGGWVRDKLLGVGSNDVDVG 70
Query: 119 LDNMMGSEFATKVAEY------LSATGETAPSG--------FGVIPSNPDQSKHLETATM 164
++NM G +F + EY L + P+G I +NP++SKHLET T
Sbjct: 71 INNMTGYQFGLLLKEYMDRPENLEKYRQEQPNGELKHAIASLHKIEANPEKSKHLETVTT 130
Query: 165 KLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGR 224
+++ L ID VNLR E YSE+SR P M FGTA+EDA RRD TIN+LFYN+N S VED TGR
Sbjct: 131 RIFGLDIDLVNLRKETYSEDSRNPQMEFGTAQEDAMRRDATINALFYNLNESIVEDFTGR 190
Query: 225 GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAA 284
G+ D+K I TP+ P TF DDPLRVLR IRF +R + ++ E ++A ++ + AL
Sbjct: 191 GLEDMKKEIIRTPMEPYQTFQDDPLRVLRLIRFASRLGYNIERETQEAMRNELIGEALKL 250
Query: 285 KISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLD 344
KISRERVG EI+ M+ G P A+ I L L+ +F + + + AY
Sbjct: 251 KISRERVGKEIEKMLQGPDPRGALQFIDSLGLYPTIFA---NHQDDAQADTSSWALAYNA 307
Query: 345 AAWDLTQLIGSSTFNDDQ----RRLSQY----AALFLPFRNTTYKDNKGKKI-PVVNYT- 394
L ++T N Q +L Y A F P+ + + +G K P+ T
Sbjct: 308 LEKILKDETNAATVNVRQFLIRDKLELYYAWMIAAFAPWSSIPSRVARGPKAKPLPARTA 367
Query: 395 --FRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVK--VNDGQWSKELVDVPDAS 450
RDSL+ +D +T+ I + ++ DVK V +G+ A+
Sbjct: 368 EVARDSLR---ADNKTIAVIGDAAHNWQAIT-------DVKNSVLEGRMDGT------AA 411
Query: 451 KLRVLTGFLLREIKKFWRVALLISTL 476
+ R G +R KK WR+ +L+S L
Sbjct: 412 EARQQVGLHIRSWKKDWRLCILLSIL 437
>gi|346326136|gb|EGX95732.1| tRNA nucleotidyltransferase [Cordyceps militaris CM01]
Length = 530
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 210/377 (55%), Gaps = 29/377 (7%)
Query: 69 KIELTDTETKIFSCLLNTLRHFN---LETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
KI+L E ++ + L++ R + VLR AGGWVRDKLLG +DID+A++ M G
Sbjct: 6 KIQLDPRERRLRNLLVDVARSIDDAPQPVVLRWAGGWVRDKLLGSASHDIDVAINAMTGG 65
Query: 126 EFATKVAEYLS-----ATGETAPSGFG---VIPSNPDQSKHLETATMKLYDLWIDFVNLR 177
+F ++ E+ A AP G + PD+SKHLETA ++L+ L +DFVNLR
Sbjct: 66 QFTARLREHCQKPDVIAAHNLAPGDIGSPHTVARQPDKSKHLETAILRLFGLDLDFVNLR 125
Query: 178 CEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTP 237
E Y+++SR P M FGTAEEDA RRD TIN+LFYN+NT VED TG G+AD++ I TP
Sbjct: 126 KETYADDSRNPQMEFGTAEEDAVRRDATINALFYNLNTEEVEDFTG-GLADMEKKIIRTP 184
Query: 238 LPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDL 297
L P TF DDPLRVLR +RF +R DF ++E ++ V AL KISRERVG E++
Sbjct: 185 LEPLQTFKDDPLRVLRLVRFSSRLDFSIEEGTRRVMNDTSVLEALKVKISRERVGQELEK 244
Query: 298 MVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE-GCEMFCTAY--LDAAWDLTQL-- 352
M+ P A+ I + L+ +F P P++ + + + AY LD D+ Q
Sbjct: 245 MLQDQHPRLALQLIDDIGLYHAIFTDP--TRPDLQQPNIDRWPVAYNGLD---DILQTRT 299
Query: 353 ---IGSSTFNDDQRRLSQY--AAL--FLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASD 405
I ++ + D+ R + AA+ ++ ++ K +P V R+ K
Sbjct: 300 PGSIAATLIHTDEYRCIAWNLAAVSPWMRVQDPPGTKKKASALPPVGVIAREGYKAANKL 359
Query: 406 AETVMNIHRVLEKFLSL 422
+ + HR L++ L+L
Sbjct: 360 TDILAAAHRHLDEILAL 376
>gi|354547465|emb|CCE44199.1| hypothetical protein CPAR2_400010 [Candida parapsilosis]
Length = 521
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 113/254 (44%), Positives = 165/254 (64%), Gaps = 8/254 (3%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLET-----VLRVAGGWVRDKLLGKDCYDIDIALDNMMG 124
I L++TE+KI + L++ H+N LR+ GGWVRDKLLG D +DIDIA++++ G
Sbjct: 9 ISLSETESKIRNLLVDYCNHYNASHQDKPLTLRITGGWVRDKLLGYDSHDIDIAVNHLSG 68
Query: 125 SEFATKVAEYLSATG-ETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
EF +YL + + + I NP++SKHLET T KLY + +DF+NLR E+Y+
Sbjct: 69 EEFVHNFQKYLKTKDPQFSVNHVHTIKMNPEKSKHLETCTTKLYGIDLDFINLRSEEYAH 128
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKAT 243
+SR+PT+ FGT +DA RRD T+N+LFYN+N +ED T RG+ DL +G + TPLPP T
Sbjct: 129 DSRVPTIEFGTPLQDALRRDATLNALFYNLNEEKIEDFTERGMNDLDNGILRTPLPPIKT 188
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
FLDDPLR+LR IRF ++F+F ++ E A + AL+ KIS+ER+ E+ +++ +
Sbjct: 189 FLDDPLRILRLIRFASKFNFAIEPETLDAMREKHNQQALSTKISKERIEIELRKILTSHN 248
Query: 304 PVKAMTHI--CGLT 315
P + I C L+
Sbjct: 249 PSYGLQLINYCDLS 262
>gi|295661733|ref|XP_002791421.1| tRNA nucleotidyltransferase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279978|gb|EEH35544.1| tRNA nucleotidyltransferase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 633
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 150/416 (36%), Positives = 224/416 (53%), Gaps = 45/416 (10%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG------ETAPSGFGV 148
VLR AGGWVRDKLLG + +DID+A+++M G F + EYLS G + PS V
Sbjct: 141 VLRFAGGWVRDKLLGVESHDIDVAINSMTGERFGEGLKEYLSIPGNLRKYKKLHPSNPSV 200
Query: 149 --------IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
I NP++SKHLETAT +++ L IDFVNLR E Y++ SR P + GT EED+
Sbjct: 201 VDFIKLHKIEKNPERSKHLETATTRMFGLDIDFVNLRKETYTDESRNPQIEVGTPEEDSL 260
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD T+N+LFYNI+T +ED TG+G+ D+++ I TP+ P TF DDPLRVLR IRF +R
Sbjct: 261 RRDATVNALFYNIHTELIEDFTGQGLQDMENKVIRTPMEPFQTFKDDPLRVLRLIRFASR 320
Query: 261 FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIV 320
+ +D + ++A D +K+AL AKIS+ER+G EI+ + G P+ A+ I L L+ +
Sbjct: 321 LGYTIDCDTEEAMKIDAIKSALKAKISQERIGVEIEKTLRGPDPLTALQRINRLGLYDTI 380
Query: 321 F---KLPLQVEPEVLE-GCEMFCTAYLDAAWDLTQLIGSSTF-------NDDQRRLSQYA 369
+ + V+ E G ++ ++A + T S + N+++R S
Sbjct: 381 LANHQDNVGVDTSSWEQGYDVLSLLLSNSAENGTGFEKSRQYVRDILIRNENERYFSWLL 440
Query: 370 ALFLPFRNTTYKDNKGKK----IPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPS 425
A P+ TT D K +P +DSL+ A NI K+ +I +
Sbjct: 441 AALAPW--TTVPDPIPSKPTEPMPRATTVAKDSLRADNKAA----NIITAASKYHKMISN 494
Query: 426 LVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLLYPTH 481
+ S+ E+ D P ++R G L+R I + WR+ +++ + H
Sbjct: 495 MKSS--------FLKDEIADTP--PEVRAKVGQLIRTIGRDWRLCFVLAIVREAMH 540
>gi|358374381|dbj|GAA90973.1| poly(A) polymerase [Aspergillus kawachii IFO 4308]
Length = 532
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 126/277 (45%), Positives = 168/277 (60%), Gaps = 25/277 (9%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLE-----------TVLRVAGGWVRDKLLGKDCYDIDIA 118
IELT E+ + S LL+ + + + TVLR GGWVRDKLLG D+D+
Sbjct: 11 IELTALESTLKSLLLDVAEYIHEKNIAEGRRDTEPTVLRFTGGWVRDKLLGVGSNDVDVG 70
Query: 119 LDNMMGSEFATKVAEY------LSATGETAPSG--------FGVIPSNPDQSKHLETATM 164
++NM G +F + EY L + P+G I +NP++SKHLET T
Sbjct: 71 INNMTGYQFGLLLKEYMDRPENLEKYRQKQPNGELKHAIASLHKIEANPEKSKHLETVTT 130
Query: 165 KLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGR 224
+++ L ID VNLR E YSE+SR P M FGTA+EDA RRD TIN+LFYN+N S VEDLT R
Sbjct: 131 RIFGLDIDLVNLRKETYSEDSRNPQMEFGTAQEDAMRRDATINALFYNLNESKVEDLTER 190
Query: 225 GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAA 284
G+ D++ I TP+ P TF DDPLRVLR IRF +R + ++EE ++A +D + AL
Sbjct: 191 GLEDMQKRIIRTPMEPYQTFQDDPLRVLRLIRFASRLGYNIEEETQEAMRNDLIGEALKL 250
Query: 285 KISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
KISRERVG E++ M+ G P A+ I L L+ +F
Sbjct: 251 KISRERVGKELEKMLQGPDPRGALQFIDHLGLYPTIF 287
>gi|226289247|gb|EEH44759.1| tRNA nucleotidyltransferase [Paracoccidioides brasiliensis Pb18]
Length = 646
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 220/409 (53%), Gaps = 45/409 (11%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET------APSGFGV 148
VLR AGGWVRDKLLG + +DID+A+++M G +F + EYLS G PS V
Sbjct: 154 VLRFAGGWVRDKLLGVESHDIDVAINSMTGEKFGEGLKEYLSIPGNLRKYKIFHPSNPSV 213
Query: 149 --------IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
I NP++SKHLETAT +++ L IDFVNLR E Y++ SR P + GT EED+
Sbjct: 214 VDFIKLHKIEKNPERSKHLETATTRMFGLDIDFVNLRKETYTDESRNPQVEVGTPEEDSL 273
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD T+N+LFYNI+T +ED TG+G+ D+K+ I TP+ P TF DDPLRVLR IRF +R
Sbjct: 274 RRDATVNALFYNIHTELIEDFTGQGLQDMKNKIIRTPMEPFQTFKDDPLRVLRLIRFASR 333
Query: 261 FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIV 320
+ +D + ++A D +K+AL AKIS+ER+G EI+ + G P+ A+ I L L+ +
Sbjct: 334 LGYTIDCDTEEAMKIDAIKSALKAKISQERIGVEIEKTLRGPDPLTALQRINRLGLYDTI 393
Query: 321 F---KLPLQVEPEVLE-GCEMFCTAYLDAAWDLTQLIGSSTF-------NDDQRRLSQYA 369
+ + V+ E G ++ ++A + T S + N+++R S
Sbjct: 394 LANHQDNVGVDTSSWERGYDVLSLLLSNSAENGTGFEKSRQYVRDILIRNENERYFSWLL 453
Query: 370 ALFLPFRNTTYKDNKGKK----IPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPS 425
A P+ TT D K +P +DSL+ A NI K+ +I
Sbjct: 454 AALAPW--TTVPDPIPSKPTEPMPRATTVAKDSLRADNKAA----NIITAASKYHKMISH 507
Query: 426 LVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLIS 474
+ S+ E+ D P ++R G +R I + WR+ +++
Sbjct: 508 MKSS--------FLKDEIADTP--PEVRAKVGQFIRTIGRDWRLCFVLA 546
>gi|407920185|gb|EKG13402.1| hypothetical protein MPH_09428 [Macrophomina phaseolina MS6]
Length = 967
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/257 (45%), Positives = 158/257 (61%), Gaps = 25/257 (9%)
Query: 91 NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGV-- 148
N + VLR GGWVRDKLLG + +DID+A++ M G +F ++ EYL G P +G+
Sbjct: 88 NTQLVLRFTGGWVRDKLLGVESHDIDVAINKMTGFQFGLRLKEYLEIPGN--PEKYGLEG 145
Query: 149 ---------------------IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRI 187
I +NP++SKHLET T ++ L ID VNLR E Y+E+SR
Sbjct: 146 VASSEKAGTSAKNKQVGGLHKIEANPEKSKHLETVTTRILGLDIDLVNLRKETYTEDSRN 205
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDD 247
P M FGT EEDA RRD T+N++FYN+N S VED TG+G D++ I TPL P TF DD
Sbjct: 206 PQMEFGTPEEDALRRDATVNAMFYNLNNSEVEDFTGKGFDDMQKRIIRTPLEPYQTFKDD 265
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
PLRVLR IRF +R + +D ++ ++++K AL KISRERVG E++ M+ G P+ A
Sbjct: 266 PLRVLRLIRFASRLGYSIDPTAEEYMGNEDIKQALRIKISRERVGVELEKMLRGPDPLGA 325
Query: 308 MTHICGLTLFWIVFKLP 324
M +I L L+ VF P
Sbjct: 326 MQYIDRLGLYTTVFSDP 342
>gi|225682071|gb|EEH20355.1| tRNA nucleotidyltransferase [Paracoccidioides brasiliensis Pb03]
Length = 646
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 220/409 (53%), Gaps = 45/409 (11%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET------APSGFGV 148
VLR AGGWVRDKLLG + +DID+A+++M G +F + EYLS G PS V
Sbjct: 154 VLRFAGGWVRDKLLGVESHDIDVAINSMTGEKFGEGLKEYLSIPGNLRKYKIFHPSNPSV 213
Query: 149 --------IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
I NP++SKHLETAT +++ L IDFVNLR E Y++ SR P + GT EED+
Sbjct: 214 VDFIKLHKIEKNPERSKHLETATTRMFGLDIDFVNLRKETYTDESRNPQVEVGTPEEDSL 273
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD T+N+LFYNI+T +ED TG+G+ D+K+ I TP+ P TF DDPLRVLR IRF +R
Sbjct: 274 RRDATVNALFYNIHTELIEDFTGQGLQDMKNKIIRTPMEPFQTFKDDPLRVLRLIRFASR 333
Query: 261 FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIV 320
+ +D + ++A D +K+AL AKIS+ER+G EI+ + G P+ A+ I L L+ +
Sbjct: 334 LGYTIDCDTEEAMKIDAIKSALKAKISQERIGVEIEKTLRGPDPLTALQRINRLGLYDTI 393
Query: 321 F---KLPLQVEPEVLE-GCEMFCTAYLDAAWDLTQLIGSSTF-------NDDQRRLSQYA 369
+ + V+ E G ++ ++A + T S + N+++R S
Sbjct: 394 LANHQDNVGVDTSSWERGYDLLSLLLSNSAENGTGFEKSRQYVRDILIRNENERYFSWLL 453
Query: 370 ALFLPFRNTTYKDNKGKK----IPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPS 425
A P+ TT D K +P +DSL+ A NI K+ +I
Sbjct: 454 AALAPW--TTVPDPIPSKPTEPMPRATTVAKDSLRADNKAA----NIITAASKYHKMISH 507
Query: 426 LVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLIS 474
+ S+ E+ D P ++R G +R I + WR+ +++
Sbjct: 508 MKSS--------FLKDEIADTP--PEVRAKVGQFIRTIGRDWRLCFVLA 546
>gi|167390862|ref|XP_001739538.1| poly(A) polymerase [Entamoeba dispar SAW760]
gi|165896812|gb|EDR24139.1| poly(A) polymerase, putative [Entamoeba dispar SAW760]
Length = 472
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/380 (35%), Positives = 199/380 (52%), Gaps = 24/380 (6%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I LT E +F L T+ HF L T++RV GGWVRDKLLGK+ +DIDI +DNM +F+
Sbjct: 7 IRLTQNEFMVFDLLKQTVLHFKLSTIIRVVGGWVRDKLLGKESHDIDITVDNMQSYQFSQ 66
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
+ +Y++ + SG G+I N KHLETAT+++ ++ ID LR DY +N
Sbjct: 67 YLQKYINEHTQHNVSGIGIIHKNHSAGKHLETATLRIDNIAIDICCLRAADYCDNDE--- 123
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
+ GT EDA RRD TIN++FY +N +EDLTG G++DLK G I TP+ PK T DDP
Sbjct: 124 EKIGTPLEDAQRRDFTINAMFYRVNDDQIEDLTGCGLSDLKSGVIRTPISPKETLHDDPA 183
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
R LRAIRF + F+LDEEL++ + + + +SRER+G E+ M+ ++P +
Sbjct: 184 RALRAIRFSGKMGFVLDEELEQEMKTKYIGDKMTTGLSRERLGRELIGMIQSDRPAYCID 243
Query: 310 HICGLTLFWIVF-KLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQY 368
I F +F +L V+ EM+ + F +R +
Sbjct: 244 QIRRFGYFKGLFGELDEITTTNVVRSYEMYAQEF-------------GVFELGRREIGFL 290
Query: 369 AALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIP---- 424
AAL + T + N K++ V+ DSLK + ++ +H +++ L
Sbjct: 291 AALLY---SVTRETNPKKRMAKVHSVIIDSLKLSVKERNNIILVHNGVKELEQLSNKKEW 347
Query: 425 SLVSAEDVKVNDGQWSKELV 444
+ V + V +W KE +
Sbjct: 348 TRVEVGRIVVASAEWWKEAI 367
>gi|400600063|gb|EJP67754.1| poly A polymerase head domain-containing protein [Beauveria
bassiana ARSEF 2860]
Length = 528
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/378 (39%), Positives = 211/378 (55%), Gaps = 32/378 (8%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLET--VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSE 126
+I+L E ++ + L++ R + + +LR AGGWVRDKLLG +DID+A+++M G +
Sbjct: 6 RIQLDPRERRLRNLLVDVARSVDGPSPVILRWAGGWVRDKLLGSASHDIDVAINSMTGGQ 65
Query: 127 FATKVAEYLSATGETAPSGF--GVIPS------NPDQSKHLETATMKLYDLWIDFVNLRC 178
F + E+ A G G I S P++SKHLETA ++L+ L +DFVNLR
Sbjct: 66 FTAHLREHCQRPDVIAAHGLVDGDIGSPHTVARQPEKSKHLETAILRLFGLDLDFVNLRK 125
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y+++SR P M FGTAEEDA RRD TIN+LFYN+NT VED TG G+AD++ I TPL
Sbjct: 126 ETYADDSRNPQMEFGTAEEDALRRDATINALFYNLNTEEVEDFTG-GLADMEKRIIRTPL 184
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P TF DDPLRVLR +RF +R DF +DE +K A V AL AKISRERVG E++ M
Sbjct: 185 EPLQTFKDDPLRVLRLVRFSSRLDFSIDEGTRKFMADTSVLDALKAKISRERVGQELEKM 244
Query: 299 VSGNQPVKAMTHICGLTLFWIVFKLPLQVE---PEVLEGCEMFCTAY--LDAAWDL--TQ 351
+ P A+ I + L+ +F P + + P++ + AY LD D+ TQ
Sbjct: 245 LQDKHPRLALQLIDDIGLYHAIFTDPARPDMKKPDITR----WPVAYNGLD---DILQTQ 297
Query: 352 LIGSST----FNDDQRRLSQYAALFLPF---RNTTYKDNKGKKIPVVNYTFRDSLKRKAS 404
GS D+ R ++ A P+ ++ K +P V R+ K
Sbjct: 298 TPGSIAATLMHTDEYRWIAWNLAAVSPWMRVQDPPGTKKKANALPPVGVVAREGYKAANK 357
Query: 405 DAETVMNIHRVLEKFLSL 422
+ + HR L++ L+L
Sbjct: 358 LTDIMAASHRHLDEILAL 375
>gi|452838522|gb|EME40462.1| hypothetical protein DOTSEDRAFT_46837 [Dothistroma septosporum
NZE10]
Length = 939
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 211/400 (52%), Gaps = 64/400 (16%)
Query: 40 TTRNLGFLRCKATMSEQEPPR--------PVVVQ-VRDK-----IELTDTETKIFSCLLN 85
TT G+ R + + PPR PV+VQ V D I++T ET LL+
Sbjct: 8 TTSPEGYKRRR--LDSPTPPRRRAFSNMAPVLVQEVEDDTPQPTIDMTPVETTFRRLLLD 65
Query: 86 TLRHF-------NLET-------------VLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
T + N+E+ VLR GGWVRDKLLG +DID+A++ M G
Sbjct: 66 TAEYIQGNPISSNVESQVPLPLALEKEPLVLRFTGGWVRDKLLGVQSHDIDVAINKMTGF 125
Query: 126 EFATKVAEYLSATG---------------ETAPSG----------FGVIPSNPDQSKHLE 160
+FA ++ EYL G ++A +G I +NP++SKHLE
Sbjct: 126 QFALRMKEYLELPGNLEKYGLESIAANEKQSAKAGTTDKSKTVGGLHKIEANPEKSKHLE 185
Query: 161 TATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVED 220
T T+K+ + IDFVNLR E YS++SR P M FGT EEDA RRD T+N++FYNINT +ED
Sbjct: 186 TTTVKILGMDIDFVNLRKETYSDDSRNPQMEFGTPEEDALRRDATVNAMFYNINTEEIED 245
Query: 221 LTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKA 280
TG+G D++ I TPL P TF DDPLRVLR IRF +R + +D++ +A + ++K
Sbjct: 246 FTGQGHDDMRDNIIRTPLEPYQTFKDDPLRVLRLIRFASRLGYTIDQDALEAMRNGDIKD 305
Query: 281 ALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCT 340
AL KISRERVG E++ + G P +A+ + L L+ +F P +
Sbjct: 306 ALRRKISRERVGVEMEKSLQGPDPHEALRLVFELDLYDTIFSDPAVTNDDHYSPDTEGWK 365
Query: 341 AYLDAAWDLTQ--LIGSSTFND-DQRRLSQYAALFLPFRN 377
+D DLT +I + D D+R L+ A +P+R+
Sbjct: 366 VLIDTVEDLTSGGIIHDNLIRDQDERYLAWTLAALVPYRD 405
>gi|384483826|gb|EIE76006.1| hypothetical protein RO3G_00710 [Rhizopus delemar RA 99-880]
Length = 435
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 176/297 (59%), Gaps = 10/297 (3%)
Query: 122 MMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDY 181
MMG EFAT V +YL + G S I SNP++SKHLETAT KL+D +DF NLR E Y
Sbjct: 1 MMGYEFATFVNKYLKSQGHPTRS-IAKIDSNPEKSKHLETATTKLFDQEVDFCNLRTEVY 59
Query: 182 SENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPP 240
SRIP+ + FGT EDAYRRD+TINSLFYN+NT VEDLT GI+DL HG I TPL P
Sbjct: 60 EPGSRIPSHITFGTPTEDAYRRDITINSLFYNVNTMQVEDLTKHGISDLIHGIIRTPLKP 119
Query: 241 KATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVS 300
TF DDPLRV+R IRF +RF+F + E+ +AA E+K AL KISRER+G E + M++
Sbjct: 120 FETFHDDPLRVIRCIRFASRFNFEMTPEIIEAAKHPEIKDALIHKISRERIGAEFEKMIT 179
Query: 301 GNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFND 360
G P+ A+ I L L+ ++ + P ++ G T ++A + L +
Sbjct: 180 GPHPLLALCLIHQLELYSVIMQPP----SGIINGTVGSETEAVNAVGIVDWLEKNDALGP 235
Query: 361 D---QRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHR 414
++R +A LP+ T + K K +P V RD++K +D TV I R
Sbjct: 236 SDAVEKRQMILSASVLPYLGVTV-EQKKKIMPAVQLVLRDAIKTTNADMNTVSTIFR 291
>gi|255956289|ref|XP_002568897.1| Pc21g19060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590608|emb|CAP96803.1| Pc21g19060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 561
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 162/478 (33%), Positives = 237/478 (49%), Gaps = 72/478 (15%)
Query: 48 RCKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHF--------------NLE 93
R + + +E P + IELT E+ + + LL+ + + E
Sbjct: 17 RRRISSPTREGSYPTMSPAMPTIELTPLESTLRTLLLDVAHYITEQKIPEGGSTAKDHSE 76
Query: 94 TVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATK------VAEYLSATGETAPSG-- 145
TVLR GGWVRDKLLG D +DID+ + NM G +F V E+L + P+G
Sbjct: 77 TVLRFTGGWVRDKLLGVDSHDIDVGISNMTGYQFGMALKDYLDVPEHLENYKKGLPNGEM 136
Query: 146 ------FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDA 199
I +NP++SKHLET T K++ L ID VNLR E Y+++SR P M FGTA EDA
Sbjct: 137 HDAIVSLHKIEANPEKSKHLETVTTKIFGLDIDLVNLRKETYTDDSRNPQMEFGTAVEDA 196
Query: 200 YRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGA 259
RRD TIN+LFYN+N S +EDLT RG+ D+K I P+ P TF DDPLRVLR IRF +
Sbjct: 197 LRRDATINALFYNLNESRLEDLTERGLDDMKKNIIRCPMEPYQTFKDDPLRVLRLIRFAS 256
Query: 260 RFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWI 319
R + ++ E + A ++++ AL KIS+ERVGTE++ M+ G P A+ I L LF
Sbjct: 257 RLGYQIEAETEAAMQIEDIREALKLKISKERVGTEVEKMLRGPDPRGALQFIDRLQLFPT 316
Query: 320 VFK------------LPLQ-------VEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFND 360
+F PL + PE + E+ +T+ I F D
Sbjct: 317 IFANHHDDVKADTSTWPLAYNTLARLLHPEAGDSEEVQA---------VTKRIRGVLFRD 367
Query: 361 DQRRLSQYA-ALFLPFRNTTYKDNKGKKIPVVNYTF-RDSLKRKASDAETVMNIHRVLEK 418
+ + A F P+ + + KGK +P R+SL+ SD +T +N R
Sbjct: 368 ETTIYYAWMIATFAPWTSIPGRTGKGKPLPPRAVEVGRESLR---SDNKT-LNALRAA-- 421
Query: 419 FLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTL 476
+L E + + + ++ P +++R G +R K W+ +L++ L
Sbjct: 422 ------ALHYKETIATKNALLTNQMSGTP--AEIRQRVGLQMRSWNKDWKFCILLAIL 471
>gi|119482211|ref|XP_001261134.1| poly(A) polymerase [Neosartorya fischeri NRRL 181]
gi|119409288|gb|EAW19237.1| poly(A) polymerase [Neosartorya fischeri NRRL 181]
Length = 633
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 153/241 (63%), Gaps = 14/241 (5%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL------SATGETAPSG--- 145
VLR GGWVRDKLLG D +DID+ + +M G +F + +YL P+G
Sbjct: 150 VLRFTGGWVRDKLLGVDSHDIDVGISSMTGYQFGMALKDYLDIPENLEKYKRNHPNGEMK 209
Query: 146 -----FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
I +NP++SKHLET T K++ L ID VNLR E Y+++SR P M +GTAEEDA
Sbjct: 210 EAIVSLHKIEANPEKSKHLETVTTKIFGLDIDLVNLRKETYTDDSRNPQMEYGTAEEDAL 269
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD TIN+LFYN+N S VEDLTGRG +D++ I TPL P TF DDPLRVLR IRF +R
Sbjct: 270 RRDATINALFYNLNESKVEDLTGRGFSDMRDKIIRTPLEPYQTFKDDPLRVLRLIRFASR 329
Query: 261 FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIV 320
+ +D ++A + ++ AAL KISRERVGTE++ M+ G P A+ I L L+ +
Sbjct: 330 LGYQIDPNTERAMQNSDISAALKLKISRERVGTELEKMLKGPDPRGALRFIDRLGLYHTI 389
Query: 321 F 321
Sbjct: 390 L 390
>gi|85000969|ref|XP_955203.1| tRNA nucleotidyltransferase [Theileria annulata strain Ankara]
gi|65303349|emb|CAI75727.1| tRNA nucleotidyltransferase, putative [Theileria annulata]
Length = 615
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/333 (39%), Positives = 196/333 (58%), Gaps = 27/333 (8%)
Query: 10 KQNPLLLTISSF-------LYRPPTKTVSFRNIFTVNTTRNLGFLRCKATMSEQEPPRPV 62
K N L L + +F L+RP + S+ + N ++ L M+++ +
Sbjct: 72 KSNCLFLPVCAFRESKLRPLFRPIFTSGSY---YCNNYSKFLNLTNVNVNMTDKTVSLDL 128
Query: 63 VV-------QVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDI 115
V R K ++T++E ++F+ L + ++L+ LRV GGWVRDKLL KD DI
Sbjct: 129 DVYRNYTEKSGRAKFKITESENRLFNLLNECVDFYDLKMDLRVVGGWVRDKLLDKDNKDI 188
Query: 116 DIALDNMMGSEFATKVAEYLSATGETAPSGF----GVIPSNPDQSKHLETATMKLYDLWI 171
DIA+ M G +F EYL+ + GF GV+ P+QSKHLETATM L +
Sbjct: 189 DIAIPKMTGIKFC----EYLNNFTKDK-YGFSRTVGVVKRCPEQSKHLETATMNLLGFDV 243
Query: 172 DFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKH 231
DFVNLR EDYS N+RIP M+ GT EDA RRD T+NSLFYNI+ + +ED TG G+ DLK+
Sbjct: 244 DFVNLRTEDYSSNTRIPDMKIGTPVEDAMRRDFTVNSLFYNISKNFIEDFTGTGLEDLKN 303
Query: 232 GKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERV 291
G I T P F+DDPLR++RA+RF +RF+F LDE+LK + +++V ALA K++R R+
Sbjct: 304 GIIRTCSSPYEIFMDDPLRLIRAVRFSSRFNFKLDEKLKD-SINEQVLKALAQKVTRPRI 362
Query: 292 GTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
E++ ++S + +A + + ++ +P
Sbjct: 363 SQELENILSKSNVSEAFKLMYQFKILHVLLNVP 395
>gi|9836828|gb|AAG00316.1|AF207744_1 tRNA nucleotidyltransferase [Kluyveromyces lactis]
Length = 489
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 161/262 (61%), Gaps = 7/262 (2%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFN---LET---VLRVAGGWVRDKLLGKDCYDIDIAL 119
V KI+L E++I + + H+N ET V R+ GGWVRDKLLG D D+DIA+
Sbjct: 5 VASKIQLNKVESEICTLVKEFCSHYNKANAETEPLVARITGGWVRDKLLGNDSNDLDIAI 64
Query: 120 DNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCE 179
+NM G +FA K+ +L G S I NP +SKHLET T KL+D+ +DFVNLR E
Sbjct: 65 NNMTGEQFAEKLCAFLQDRGLETHS-LHTIDKNPSKSKHLETCTTKLFDVPVDFVNLRSE 123
Query: 180 DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP 239
+Y+ SRIP + FGT +DA RRD T+N++FYNI +ED T +G DL G + TPLP
Sbjct: 124 EYTMESRIPKVEFGTPYDDAMRRDATLNAMFYNITEDKIEDFTKKGFQDLNDGILRTPLP 183
Query: 240 PKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
P+ TF+DDPLRVLR IRF +RF+F +D + +A + + KIS+ RV TE+ +
Sbjct: 184 PRQTFIDDPLRVLRLIRFASRFNFQIDPQTYQAMRDPGIHQSFNHKISKGRVYTEMHKTL 243
Query: 300 SGNQPVKAMTHICGLTLFWIVF 321
+ P A+ I G L ++F
Sbjct: 244 TSANPFYALDLIQGAHLSRVIF 265
>gi|50306057|ref|XP_452990.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642123|emb|CAH01841.1| KLLA0C17688p [Kluyveromyces lactis]
Length = 489
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 161/262 (61%), Gaps = 7/262 (2%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFN---LET---VLRVAGGWVRDKLLGKDCYDIDIAL 119
V KI+L E++I + + H+N ET V R+ GGWVRDKLLG D D+DIA+
Sbjct: 5 VASKIQLNKVESEICTLVKEFCSHYNKANAETEPLVARITGGWVRDKLLGNDSNDLDIAI 64
Query: 120 DNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCE 179
+NM G +FA K+ +L G S I NP +SKHLET T KL+D+ +DFVNLR E
Sbjct: 65 NNMTGEQFAEKLCAFLQDRGLETHS-LHTIDKNPSKSKHLETCTTKLFDVPVDFVNLRSE 123
Query: 180 DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP 239
+Y+ SRIP + FGT +DA RRD T+N++FYNI +ED T +G DL G + TPLP
Sbjct: 124 EYTMESRIPKVEFGTPYDDAMRRDATLNAMFYNITEDKIEDFTKKGFQDLNDGILRTPLP 183
Query: 240 PKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
P+ TF+DDPLRVLR IRF +RF+F +D + +A + + KIS+ RV TE+ +
Sbjct: 184 PRQTFIDDPLRVLRLIRFASRFNFQIDPQTYQAMRDPGIHQSFNHKISKGRVYTEMHKTL 243
Query: 300 SGNQPVKAMTHICGLTLFWIVF 321
+ P A+ I G L ++F
Sbjct: 244 TSANPFYALDLIQGAHLSRVIF 265
>gi|391871016|gb|EIT80182.1| tRNA nucleotidyltransferase/poly(A) polymerase [Aspergillus oryzae
3.042]
Length = 567
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/242 (48%), Positives = 152/242 (62%), Gaps = 14/242 (5%)
Query: 94 TVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL--------------SATG 139
TVLR GGWVRDKLLG D +DID+ ++NM G +F + +YL +
Sbjct: 81 TVLRFTGGWVRDKLLGIDSHDIDVGINNMTGYQFGLLLKDYLDIPENLQKYKKNHNNGQL 140
Query: 140 ETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDA 199
+ A I +NP++SKHLET T K++ L ID VNLR E YS++SR P M FGTAEEDA
Sbjct: 141 KDAIVSLHKIEANPEKSKHLETVTTKIFGLDIDLVNLRKETYSDDSRNPQMEFGTAEEDA 200
Query: 200 YRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGA 259
RRD TIN+LFYN+N S VED T RG D++ I TP+ P TF DDPLRVLR IRF +
Sbjct: 201 MRRDATINALFYNLNESKVEDFTRRGFQDMRDQVIRTPMEPYQTFKDDPLRVLRLIRFAS 260
Query: 260 RFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWI 319
R + +DE+ + A + ++ AL KISRERVGTE+ M+ G P A+ I L L+
Sbjct: 261 RLGYRIDEDTENAMKNKDISEALKLKISRERVGTEMTKMLKGPDPRGALQFIDRLELYPT 320
Query: 320 VF 321
+F
Sbjct: 321 IF 322
>gi|156049161|ref|XP_001590547.1| hypothetical protein SS1G_08287 [Sclerotinia sclerotiorum 1980]
gi|154692686|gb|EDN92424.1| hypothetical protein SS1G_08287 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 516
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 126/269 (46%), Positives = 164/269 (60%), Gaps = 15/269 (5%)
Query: 70 IELTDTETKIFSCLLNTLRHFN------LETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
I LT E ++ + LL+ + N + LR AGGWVRDKLLG + +DID A++ M
Sbjct: 6 IALTSREGQLRNLLLDVANYINESKEIEKKVELRWAGGWVRDKLLGIESHDIDTAINVMT 65
Query: 124 GSEFATKVAEYLSATGETAPSGFGV--------IPSNPDQSKHLETATMKLYDLWIDFVN 175
G F+ K+ EYL T I +NP++SKHLETAT ++ +DFVN
Sbjct: 66 GYNFSLKMREYLEDTENLKKHALEAKDVKKLYKIAANPEKSKHLETATTNIFQFDVDFVN 125
Query: 176 LRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIV 235
LR E Y+E+SR P M GTAEEDA RRD TIN+LFYN++T VED TG G+AD+K I
Sbjct: 126 LRKETYTEDSRNPQMEPGTAEEDALRRDATINALFYNLHTDIVEDFTG-GLADMKAKVIK 184
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
TPL P TF DDPLRVLR IRF +R DF +D E +K + + AL KISRERVG E+
Sbjct: 185 TPLEPYTTFKDDPLRVLRLIRFASRLDFKIDSESEKFMGNPAIMEALKLKISRERVGVEV 244
Query: 296 DLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
+ M+ GN P +++ L L+ +F P
Sbjct: 245 EKMLKGNNPWQSLHLFDRLGLYSTIFTDP 273
>gi|302891489|ref|XP_003044626.1| hypothetical protein NECHADRAFT_94217 [Nectria haematococca mpVI
77-13-4]
gi|256725551|gb|EEU38913.1| hypothetical protein NECHADRAFT_94217 [Nectria haematococca mpVI
77-13-4]
Length = 569
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 201/376 (53%), Gaps = 26/376 (6%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLE------TVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
I+LT E ++ LL+ + + VLR AGGWVRDKLL +DID+A++ M
Sbjct: 48 IQLTPREQQLRRLLLDVAKSIDEAGTAPEPIVLRWAGGWVRDKLLNIQSHDIDVAINAMT 107
Query: 124 GSEFATKVAEYLSATGETAPSGFGV--------IPSNPDQSKHLETATMKLYDLWIDFVN 175
G FA + +Y A G G + NP++SKHLETA +K++ L +DFVN
Sbjct: 108 GVPFAQHMCDYCEQPDAIAKHGIGPDDIGSLHNVARNPEKSKHLETAMVKIFGLDLDFVN 167
Query: 176 LRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIV 235
LR E Y+E+SR P M FGTAEEDA RRD T+N+LFYN++ +ED TG G++D+ I
Sbjct: 168 LRKETYTEDSRNPQMEFGTAEEDARRRDATVNALFYNLHDDRIEDFTG-GLSDMDSKIIK 226
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
TPL P TF+DDPLRVLR +RF +R F +D + +K A+ +V AL KISRERVG E+
Sbjct: 227 TPLEPFQTFMDDPLRVLRLVRFASRLQFTIDPDTRKFMANPKVLEALRLKISRERVGVEL 286
Query: 296 DLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGS 355
+ M+ G P +++ I L LF +F P + + V + + AY DL Q
Sbjct: 287 EKMLKGAHPYQSLEFIDELQLFPAIFTDPTREDLPVPDDSR-WRVAY-SCLQDLLQDQSP 344
Query: 356 STF------NDDQRRLSQYAALFLPFRNTTYKDN---KGKKIPVVNYTFRDSLKRKASDA 406
S+ DD + A P+ N K +P+V R+ K +
Sbjct: 345 SSIASQLVQTDDATYTAWNLAAICPWMTVEEPPNFRKKANSLPLVAVVAREGFKAPNKLS 404
Query: 407 ETVMNIHRVLEKFLSL 422
+ + HR E+ + L
Sbjct: 405 DIIAASHRHREEIMKL 420
>gi|240278564|gb|EER42070.1| poly(A) polymerase [Ajellomyces capsulatus H143]
gi|325090516|gb|EGC43826.1| poly(A) polymerase [Ajellomyces capsulatus H88]
Length = 639
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 162/516 (31%), Positives = 244/516 (47%), Gaps = 75/516 (14%)
Query: 15 LLTISSFLYRP---PTKTVSFRNIFTVNTTRNLGFLRCKATMSEQEPPRPVVVQVRDKIE 71
LL ++ L RP K+ S R LG +AT R + +I
Sbjct: 53 LLCLTQSLCRPMPFREKSPSLPQERPTKRRRILGTFTNQATQRVMPEERNMAPPAVPRIT 112
Query: 72 LTDTETKIFSCLLNTLRHFNLET--------------VLRVAGGWVRDKLLGKDCYDIDI 117
LT E + CLL+ VLR GGWVRDKLLG D +DID+
Sbjct: 113 LTPIEQTLRLCLLDAAEFIQQRGNQDPASVPTTPDPLVLRFVGGWVRDKLLGVDSHDIDV 172
Query: 118 ALDNMMGSEFATKVAEYLSATG-----ETAPSG---------FGVIPSNPDQSKHLETAT 163
A++ M G F + EYL G + SG I NP++SKHLETAT
Sbjct: 173 AINCMTGERFGEGLKEYLDMPGNLEKYKACHSGNPSIIDFIKIHKIEKNPEKSKHLETAT 232
Query: 164 MKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG 223
K++ L ID VNLR E YS++SR P + GT EEDA RRD T+N+LFYNI+T ++ED TG
Sbjct: 233 TKIFGLDIDLVNLRKETYSDDSRNPQIEIGTPEEDALRRDATVNALFYNIHTDTIEDFTG 292
Query: 224 RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALA 283
+G+ D+++ I TPL P TF DDPLRVLR IRF +R + +D + ++A +++KAAL
Sbjct: 293 KGLQDMENKIIRTPLAPYQTFKDDPLRVLRLIRFASRLGYTIDSDTEEAMKIEDIKAALK 352
Query: 284 AKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYL 343
AKI++ER+G E++ + G P+ A+ I L L+ +F + G + T++
Sbjct: 353 AKITQERIGVEMEKTLRGPDPLTALQRINRLGLYDTIF-----ANHQDNAGVD---TSHW 404
Query: 344 DAAWD-LTQLIGSSTF------------------NDDQRRLSQYAALFLPF---RNTTYK 381
+ ++ L L+ ST N+++R + + A P+ +
Sbjct: 405 ERGYNALALLLSKSTANMTESQKTRKHVRDILIRNENERYFAWFLAALAPWTIVADPKPS 464
Query: 382 DNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSK 441
+ +P RDSL+ A + + + S +
Sbjct: 465 KSSKPPVPRATTVARDSLRADNRAAGIISAASKNYRMIWDIKSSFL------------KN 512
Query: 442 ELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLL 477
E+ D P +++RV G +R + WR+ +++ LL
Sbjct: 513 EIADTP--AEMRVKMGQFIRSLSHDWRLCFVLAMLL 546
>gi|347839234|emb|CCD53806.1| similar to tRNA nucleotidyltransferase [Botryotinia fuckeliana]
Length = 536
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 162/267 (60%), Gaps = 15/267 (5%)
Query: 72 LTDTETKIFSCLL------NTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
LT E+++ + LL N + + LR AGGWVRDKLLG +DIDIA++ M G
Sbjct: 28 LTPRESQLRNLLLDVANFVNESKDIEKKVELRWAGGWVRDKLLGIQSHDIDIAINVMTGQ 87
Query: 126 EFATKVAEYLSATGETAPSGFGV--------IPSNPDQSKHLETATMKLYDLWIDFVNLR 177
F KV EYL G I +NP++SK LETAT ++ +DFVNLR
Sbjct: 88 NFGLKVREYLEDAENLKKHGLEAKDVKKLYKIAANPEKSKQLETATTNIFQFDVDFVNLR 147
Query: 178 CEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTP 237
E Y+E+SR P M FGTAEEDA RRD TIN+LFYN++T +ED TG G+AD+K I TP
Sbjct: 148 KETYTEDSRNPEMEFGTAEEDALRRDATINALFYNLHTDILEDFTG-GLADMKAKLIKTP 206
Query: 238 LPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDL 297
L P TF DDPLRVLR IRF +R DF +D E + ++ + AL KISRERVG E++
Sbjct: 207 LEPYTTFKDDPLRVLRLIRFASRLDFKIDSEAEDCMSNPAIMEALRLKISRERVGVEVEK 266
Query: 298 MVSGNQPVKAMTHICGLTLFWIVFKLP 324
M+ GN P ++ + L ++ +F P
Sbjct: 267 MLKGNNPWLSLNYFDRLGIYSTIFTDP 293
>gi|299755930|ref|XP_001828982.2| transfer RNA nucleotidyltransferase [Coprinopsis cinerea
okayama7#130]
gi|298411445|gb|EAU92989.2| transfer RNA nucleotidyltransferase [Coprinopsis cinerea
okayama7#130]
Length = 477
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 174/294 (59%), Gaps = 17/294 (5%)
Query: 123 MGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYS 182
MG FA +AE+ G A I NPDQSKHLETAT+KLY L ID VNLR E+Y+
Sbjct: 1 MGLPFAEHLAEFAKTKG-IATGTIAKIAQNPDQSKHLETATLKLYGLDIDLVNLRSEEYA 59
Query: 183 ENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPK 241
ENSRIPT + FGT EDA RRD+TIN+LFYN++T SVED T +G+ DL+ G I TPLPPK
Sbjct: 60 ENSRIPTGVSFGTPLEDAKRRDITINALFYNVHTHSVEDFTEKGLDDLRDGLIRTPLPPK 119
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLRVLR +RF +RF F L +E+ AA ++ AL K++RERVG E+ M+ G
Sbjct: 120 ETFKDDPLRVLRCVRFASRFGFDLVDEISSAAKDPVIQDALVTKVTRERVGVELSKMLKG 179
Query: 302 NQPVKAMTHICGLTLFW-IVFKLPLQV---------EPEVLEGCEMFCTAYLDAAWDLTQ 351
P++++ I L+LF IV LP ++ +PE+ + LD D
Sbjct: 180 RDPLRSIELIHQLSLFTPIVSALPSEILATLSNRPKDPELARRNATVLSLLLDPIDDQIP 239
Query: 352 LIGSSTFN----DDQRRLSQYAALFL-PFRNTTYKDNKGKKIPVVNYTFRDSLK 400
+ + D R Y A FL P+ + TY D K K +P V R++LK
Sbjct: 240 PLHPIYYRYLRADATTRARLYLASFLTPYLSLTYLDKKRKALPAVEAVIREALK 293
>gi|242817425|ref|XP_002486952.1| tRNA nucleotidyltransferase [Talaromyces stipitatus ATCC 10500]
gi|218713417|gb|EED12841.1| tRNA nucleotidyltransferase [Talaromyces stipitatus ATCC 10500]
Length = 564
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 157/446 (35%), Positives = 225/446 (50%), Gaps = 54/446 (12%)
Query: 70 IELTDTETKIFSCLLN-----------TLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIA 118
IELT E I LL+ R E VLR GGWVRDKLLG +DID+A
Sbjct: 43 IELTPIEKTIQRLLLDLKGYIEQKEKSEGRTAQEEMVLRFTGGWVRDKLLGVTSHDIDVA 102
Query: 119 LDNMMGSEFATKVAEYLSA---------TGETAPSG----FGVIPSNPDQSKHLETATMK 165
+ M G +F T + EYL E A + I +NP++SKHLET K
Sbjct: 103 ISTMTGLQFGTYLQEYLDDPDNLQKYMDNKELAFTSEMLKVHTIKANPEKSKHLETVATK 162
Query: 166 LYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRG 225
L+ L ID VNLR E Y+E+SR P + FGTAEEDA RRD T+N+LFYN+NTS +ED TG G
Sbjct: 163 LFGLDIDLVNLRKETYTEHSRNPQVEFGTAEEDALRRDATVNALFYNLNTSMLEDFTGLG 222
Query: 226 IADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAK 285
+ D++ I TPL P TF DDPLRVLR IRF +R + +DE+ ++A +D++K A K
Sbjct: 223 LDDMERKLIRTPLEPYQTFKDDPLRVLRLIRFASRLGYHIDEKTQEAMQNDDIKRAFKLK 282
Query: 286 ISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPL-QVEPEV------LEGCEMF 338
IS+ERVG E++ + P + +I L L+ +F EP V + +
Sbjct: 283 ISKERVGVEVEKTLRAADPRIGLRYIDDLGLYSTIFANQYDDAEPHVASWSLAYDALDHI 342
Query: 339 CTAYL--DAAWDLTQLIGSSTFNDDQRRLSQYAALFLPF-----RNTTYKDNKGKKIPVV 391
+ L D + ++ N+D+ + A F P+ R T + K I
Sbjct: 343 LSRVLKTDELRHIKRIKNILIRNEDETFYAWVMAAFTPWVTVPERVPTSRKQKPPIIARA 402
Query: 392 NYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPD-AS 450
RD+L+ + + + + ++ SL S++S D+P A+
Sbjct: 403 AEVARDNLRMENKIVNALKDATALFKEVSSLKSSVISK---------------DIPGTAA 447
Query: 451 KLRVLTGFLLREIKKFWRVALLISTL 476
++R G +R KK WR+ +L++ L
Sbjct: 448 EVRQHVGLQIRSWKKDWRLIVLMAML 473
>gi|238502497|ref|XP_002382482.1| tRNA nucleotidyltransferase [Aspergillus flavus NRRL3357]
gi|220691292|gb|EED47640.1| tRNA nucleotidyltransferase [Aspergillus flavus NRRL3357]
Length = 688
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/242 (48%), Positives = 152/242 (62%), Gaps = 14/242 (5%)
Query: 94 TVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL--------------SATG 139
TVLR GGWVRDKLLG D +DID+ ++NM G +F + +YL +
Sbjct: 200 TVLRFTGGWVRDKLLGIDSHDIDVGINNMTGYQFGLLLKDYLDIPENLQKYKKNHNNGQL 259
Query: 140 ETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDA 199
+ A I +NP++SKHLET T K++ L ID VNLR E YS++SR P M FGTAEEDA
Sbjct: 260 KDAIVSLHKIEANPEKSKHLETVTTKIFGLDIDLVNLRKETYSDDSRNPQMEFGTAEEDA 319
Query: 200 YRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGA 259
RRD TIN+LFYN+N S VED T RG D++ I TP+ P TF DDPLRVLR IRF +
Sbjct: 320 MRRDATINALFYNLNESKVEDFTRRGFQDMRDQVIRTPMEPYQTFKDDPLRVLRLIRFAS 379
Query: 260 RFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWI 319
R + +DE+ + A + ++ AL KISRERVGTE+ M+ G P A+ I L L+
Sbjct: 380 RLGYRIDEDTENAMKNKDISEALKLKISRERVGTEMTKMLKGPDPRGALQFIDRLELYPT 439
Query: 320 VF 321
+F
Sbjct: 440 IF 441
>gi|367045404|ref|XP_003653082.1| hypothetical protein THITE_2115103 [Thielavia terrestris NRRL 8126]
gi|347000344|gb|AEO66746.1| hypothetical protein THITE_2115103 [Thielavia terrestris NRRL 8126]
Length = 579
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/287 (43%), Positives = 168/287 (58%), Gaps = 25/287 (8%)
Query: 58 PPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLET------------VLRVAGGWVRD 105
P RP+ I LT E ++ LL+ ++ + + VLR AGGWVRD
Sbjct: 50 PARPISTS----ITLTAREEQLKQLLLDAAKYIDEQDLHQQGPPPREPLVLRWAGGWVRD 105
Query: 106 KLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFG--------VIPSNPDQSK 157
KLLG +DID A++ M G F ++ Y A G +P NPD+SK
Sbjct: 106 KLLGIASHDIDTAINAMTGEAFVDRLRVYCDEPAHRARHGLADGDVGRLHTVPRNPDKSK 165
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
HLET+T++L L +DFVNLR E Y+ SR P + FGTAEEDA RRD ++N+LFYN++T
Sbjct: 166 HLETSTIRLCGLDVDFVNLRKETYTAESRNPVVEFGTAEEDALRRDASVNALFYNLHTGQ 225
Query: 218 VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDE 277
VED G G+ DL+ G + TP+ P TFLDDPLRVLR IRF +R F +D E ++ A +
Sbjct: 226 VEDFVG-GLRDLEEGLLRTPMEPLQTFLDDPLRVLRLIRFASRLGFRIDPEAERVMADER 284
Query: 278 VKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
V L KISRER+G E++ M+ G QPV+++ + L L+ VF P
Sbjct: 285 VLGRLRVKISRERIGEELEKMLKGQQPVESLRLLDRLGLYHAVFTNP 331
>gi|146323072|ref|XP_756003.2| tRNA nucleotidyltransferase [Aspergillus fumigatus Af293]
gi|129558602|gb|EAL93965.2| tRNA nucleotidyltransferase [Aspergillus fumigatus Af293]
Length = 633
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 152/241 (63%), Gaps = 14/241 (5%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL------SATGETAPSG--- 145
VLR GGWVRDKLLG D +DID+ + +M G +F + +YL P+G
Sbjct: 150 VLRFTGGWVRDKLLGVDSHDIDVGISSMTGYQFGMALKDYLDIPENLEKYKRNHPNGHMK 209
Query: 146 -----FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
I +NP++SKHLET T K++ ID VNLR E Y+++SR P M FGTAEEDA
Sbjct: 210 EAIVSLHKIEANPEKSKHLETVTTKIFGFDIDLVNLRKEMYTDDSRNPQMEFGTAEEDAL 269
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD TIN+LFYN+N S VEDLTGRG +D++ I TP+ P TF DDPLRVLR IRF +R
Sbjct: 270 RRDATINALFYNLNESKVEDLTGRGFSDMRDKIIRTPMEPYQTFKDDPLRVLRLIRFASR 329
Query: 261 FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIV 320
+ +D ++A + ++ AL KISRERVGTE++ M+ G P A+ I L L+ +
Sbjct: 330 LGYKIDPNTERAMQNSDISVALKLKISRERVGTELEKMLKGPDPRGALQLIDRLGLYHTI 389
Query: 321 F 321
F
Sbjct: 390 F 390
>gi|159130057|gb|EDP55171.1| tRNA nucleotidyltransferase [Aspergillus fumigatus A1163]
Length = 633
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 152/241 (63%), Gaps = 14/241 (5%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL------SATGETAPSG--- 145
VLR GGWVRDKLLG D +DID+ + +M G +F + +YL P+G
Sbjct: 150 VLRFTGGWVRDKLLGVDSHDIDVGISSMTGYQFGMALKDYLDIPENLEKYKRNHPNGHMK 209
Query: 146 -----FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
I +NP++SKHLET T K++ ID VNLR E Y+++SR P M FGTAEEDA
Sbjct: 210 EAIVSLHKIEANPEKSKHLETVTTKIFGFDIDLVNLRKEMYTDDSRNPQMEFGTAEEDAL 269
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD TIN+LFYN+N S VEDLTGRG +D++ I TP+ P TF DDPLRVLR IRF +R
Sbjct: 270 RRDATINALFYNLNESKVEDLTGRGFSDMRDKIIRTPMEPYQTFKDDPLRVLRLIRFASR 329
Query: 261 FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIV 320
+ +D ++A + ++ AL KISRERVGTE++ M+ G P A+ I L L+ +
Sbjct: 330 LGYKIDPNTERAMQNSDISVALKLKISRERVGTELEKMLKGPDPRGALQLIDRLGLYHTI 389
Query: 321 F 321
F
Sbjct: 390 F 390
>gi|170085391|ref|XP_001873919.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651471|gb|EDR15711.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 514
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 208/411 (50%), Gaps = 59/411 (14%)
Query: 105 DKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATM 164
++LLG C DIDIAL N+MG FA +A + A G A + I NPDQSKHLETAT
Sbjct: 2 EQLLGSQCNDIDIALSNIMGVAFAEHLAAFAQAKGVRAGT-ISKIAVNPDQSKHLETATF 60
Query: 165 KLYDLWIDFVNLRCEDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG 223
K++ L ID VNLR E+YSE SRIPT + FGT EDA RRD+TINS+FYN++ VED T
Sbjct: 61 KIFGLDIDLVNLRSEEYSETSRIPTEVLFGTPLEDARRRDITINSMFYNVHNHMVEDFTS 120
Query: 224 RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALA 283
+G+ DL G I TPLPPK TF DDPLRVLR IRF +RF F L ++K+AA E++ AL
Sbjct: 121 KGLDDLHEGVIRTPLPPKETFRDDPLRVLRCIRFASRFGFELVADIKQAAQDSEIQNALV 180
Query: 284 AKISRERVGTEIDLMV-----------------SGNQPVKAMTHICGLTLFWIVFK-LPL 325
K++RER+G EI M+ +G P+ ++ I L L+ +F LP
Sbjct: 181 TKVARERIGDEISKMMKGIVYSSFFENDFDYTHAGQDPLHSIRLIHELALYPSIFSALPP 240
Query: 326 QVEPEVLEGCEMFCTAYLDAAWDLTQLI--GSSTFNDDQRRLSQ-------------YAA 370
+V L + AA L L+ +F RL A
Sbjct: 241 EVS-STLSSAPSGSERAVSAAAILNTLLLPEQPSFPKVHHRLLAALQTDPSCRPRLYLAT 299
Query: 371 LFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAE 430
+P+ TY+D K P V R++LK + +L IP L +A
Sbjct: 300 ALIPYLGVTYRDKKKWLCPAVEVVTREALKLGKQN------------HYLDGIPLLFTAA 347
Query: 431 DVKVNDGQWSKELVDVPDASKLRVLTGFLLRE-------IKKFWRVALLIS 474
++ G + + +P A K R G +LR+ W +LL S
Sbjct: 348 ELL---GSFVTHHLTLPPA-KERKTIGLILRDKSVHNTNAGAHWTASLLFS 394
>gi|154299760|ref|XP_001550298.1| hypothetical protein BC1G_11506 [Botryotinia fuckeliana B05.10]
Length = 516
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 162/267 (60%), Gaps = 15/267 (5%)
Query: 72 LTDTETKIFSCLL------NTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
LT E+++ + LL N + + LR AGGWVRDKLLG +DIDIA++ M G
Sbjct: 8 LTPRESQLRNLLLDVANFVNESKDIEKKVELRWAGGWVRDKLLGIQSHDIDIAINVMTGQ 67
Query: 126 EFATKVAEYLSATGETAPSGFGV--------IPSNPDQSKHLETATMKLYDLWIDFVNLR 177
F KV EYL G I +NP++SK LETAT ++ +DFVNLR
Sbjct: 68 NFGLKVREYLEDAENLKKHGLEAKDVKKLYKIAANPEKSKQLETATTNIFQFDVDFVNLR 127
Query: 178 CEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTP 237
E Y+E+SR P M FGTAEEDA RRD TIN+LFYN++T +ED TG G+AD+K I TP
Sbjct: 128 KETYTEDSRNPEMEFGTAEEDALRRDATINALFYNLHTDILEDFTG-GLADMKAKLIKTP 186
Query: 238 LPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDL 297
L P TF DDPLRVLR IRF +R DF +D E + ++ + AL KISRERVG E++
Sbjct: 187 LEPYTTFKDDPLRVLRLIRFASRLDFKIDSEAEDCMSNPAIMEALRLKISRERVGVEVEK 246
Query: 298 MVSGNQPVKAMTHICGLTLFWIVFKLP 324
M+ GN P ++ + L ++ +F P
Sbjct: 247 MLKGNNPWLSLNYFDRLGIYSTIFTDP 273
>gi|261200423|ref|XP_002626612.1| poly(A) polymerase [Ajellomyces dermatitidis SLH14081]
gi|239593684|gb|EEQ76265.1| poly(A) polymerase [Ajellomyces dermatitidis SLH14081]
Length = 640
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 216/419 (51%), Gaps = 59/419 (14%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG--------ETAPS-- 144
VLR AGGWVRDKLLG D +DID+A++ + G F + EYL G + PS
Sbjct: 148 VLRFAGGWVRDKLLGVDSHDIDVAINCITGERFGEGLKEYLDTPGNLEKYKAFHSDPSII 207
Query: 145 ---GFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYR 201
I NP++SKHLETAT K++ L +D VNLR E Y+++SR P + GT EEDA R
Sbjct: 208 DCIKIHKIEKNPEKSKHLETATTKIFGLEVDLVNLRKETYTDDSRNPQIEIGTPEEDALR 267
Query: 202 RDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF 261
RD T+N+LFYNI+T +ED TG+G+ DL++ I TP+ P TF DDPLRVLR IRF +R
Sbjct: 268 RDATVNALFYNIHTDMIEDFTGKGLQDLENKIIRTPMAPFQTFKDDPLRVLRLIRFASRL 327
Query: 262 DFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ +D + ++A +++KAAL AKI++ER+G E++ + G P+ A+ I L L+ +F
Sbjct: 328 GYSIDSDTEEAMKIEDIKAALKAKITQERIGVEMEKTLRGPDPLTALQRINRLGLYDTIF 387
Query: 322 KLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLS--------------Q 367
+ + +++ LT L+ ST N D+ + + +
Sbjct: 388 A-------NHRDNAGVDTSSWERGYNALTLLLSESTGNIDESQKTREYVRDTLIRDENER 440
Query: 368 YAALFL----PFRNTTYKDNKGKK-----IPVVNYTFRDSLKRKASDAETVMNIHRVLEK 418
Y A FL P+ T D K +P RDSL+ A + + +
Sbjct: 441 YFAWFLTALAPW--VTIADPVPPKPSKPTVPRATTVARDSLRADNKAASIISAASKNYQT 498
Query: 419 FLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLL 477
+ S + E+ D P S+ RV G +R + WR+ +++ LL
Sbjct: 499 IWDIKSSFL------------KNEIADTP--SETRVKIGLFIRTLSHDWRLCFVLAMLL 543
>gi|169775845|ref|XP_001822389.1| poly(A) polymerase [Aspergillus oryzae RIB40]
gi|83771124|dbj|BAE61256.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 567
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 118/242 (48%), Positives = 152/242 (62%), Gaps = 14/242 (5%)
Query: 94 TVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL--------------SATG 139
TVLR GGWVRDKLLG D +DID+ ++NM G +F + +YL +
Sbjct: 81 TVLRFTGGWVRDKLLGIDSHDIDVGINNMTGYQFGLLLKDYLDIPENLQKYKKNHNNGQL 140
Query: 140 ETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDA 199
+ A I +NP++SKHLET T K++ L ID VNLR E YS++SR P M FGTAEEDA
Sbjct: 141 KDAIVSLHKIEANPEKSKHLETVTTKIFGLDIDLVNLRKETYSDDSRNPQMEFGTAEEDA 200
Query: 200 YRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGA 259
RRD TIN+LFYN+N S VED T RG D++ I TP+ P TF DDPLRVLR IRF +
Sbjct: 201 MRRDATINALFYNLNESKVEDFTRRGFQDMRDQVIRTPMEPYQTFKDDPLRVLRLIRFAS 260
Query: 260 RFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWI 319
R + +DE+ + A + ++ AL KISRERVGTE+ M+ G P A+ I L L+
Sbjct: 261 RLGYRIDEDTENAMKNKDISEALKLKISRERVGTEMMKMLKGPDPRGALQFIDRLELYPT 320
Query: 320 VF 321
+F
Sbjct: 321 IF 322
>gi|327352427|gb|EGE81284.1| Poly(A) polymerase [Ajellomyces dermatitidis ATCC 18188]
Length = 640
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 216/419 (51%), Gaps = 59/419 (14%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG--------ETAPS-- 144
VLR AGGWVRDKLLG D +DID+A++ + G F + EYL G + PS
Sbjct: 148 VLRFAGGWVRDKLLGVDSHDIDVAINCITGERFGEGLKEYLDTPGNLEKYKAFHSDPSII 207
Query: 145 ---GFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYR 201
I NP++SKHLETAT K++ L +D VNLR E Y+++SR P + GT EEDA R
Sbjct: 208 DCIKIHKIEKNPEKSKHLETATTKIFGLEVDLVNLRKETYTDDSRNPQIEIGTPEEDALR 267
Query: 202 RDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF 261
RD T+N+LFYNI+T +ED TG+G+ DL++ I TP+ P TF DDPLRVLR IRF +R
Sbjct: 268 RDATVNALFYNIHTDMIEDFTGKGLQDLENKIIRTPMAPFQTFKDDPLRVLRLIRFASRL 327
Query: 262 DFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ +D + ++A +++KAAL AKI++ER+G E++ + G P+ A+ I L L+ +F
Sbjct: 328 GYSIDSDTEEAMKIEDIKAALKAKITQERIGVEMEKTLRGPDPLTALQRINRLGLYDTIF 387
Query: 322 KLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLS--------------Q 367
+ + +++ LT L+ ST N D+ + + +
Sbjct: 388 A-------NHRDNAGVDTSSWERGYNALTLLLSESTGNIDESQKTREYVRDTLIRDENER 440
Query: 368 YAALFL----PFRNTTYKDNKGKK-----IPVVNYTFRDSLKRKASDAETVMNIHRVLEK 418
Y A FL P+ T D K +P RDSL+ A + + +
Sbjct: 441 YFAWFLTALAPW--VTIADPVPPKPSKPTVPRATTVARDSLRADNKAASIISAASKNYQT 498
Query: 419 FLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLL 477
+ S + E+ D P S+ RV G +R + WR+ +++ LL
Sbjct: 499 IWDIKSSFL------------KNEIADTP--SETRVKIGLFIRTLSHDWRLCFVLAMLL 543
>gi|242817430|ref|XP_002486953.1| tRNA nucleotidyltransferase [Talaromyces stipitatus ATCC 10500]
gi|218713418|gb|EED12842.1| tRNA nucleotidyltransferase [Talaromyces stipitatus ATCC 10500]
Length = 617
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 157/446 (35%), Positives = 225/446 (50%), Gaps = 54/446 (12%)
Query: 70 IELTDTETKIFSCLLN-----------TLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIA 118
IELT E I LL+ R E VLR GGWVRDKLLG +DID+A
Sbjct: 96 IELTPIEKTIQRLLLDLKGYIEQKEKSEGRTAQEEMVLRFTGGWVRDKLLGVTSHDIDVA 155
Query: 119 LDNMMGSEFATKVAEYLSA---------TGETAPSG----FGVIPSNPDQSKHLETATMK 165
+ M G +F T + EYL E A + I +NP++SKHLET K
Sbjct: 156 ISTMTGLQFGTYLQEYLDDPDNLQKYMDNKELAFTSEMLKVHTIKANPEKSKHLETVATK 215
Query: 166 LYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRG 225
L+ L ID VNLR E Y+E+SR P + FGTAEEDA RRD T+N+LFYN+NTS +ED TG G
Sbjct: 216 LFGLDIDLVNLRKETYTEHSRNPQVEFGTAEEDALRRDATVNALFYNLNTSMLEDFTGLG 275
Query: 226 IADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAK 285
+ D++ I TPL P TF DDPLRVLR IRF +R + +DE+ ++A +D++K A K
Sbjct: 276 LDDMERKLIRTPLEPYQTFKDDPLRVLRLIRFASRLGYHIDEKTQEAMQNDDIKRAFKLK 335
Query: 286 ISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPL-QVEPEV------LEGCEMF 338
IS+ERVG E++ + P + +I L L+ +F EP V + +
Sbjct: 336 ISKERVGVEVEKTLRAADPRIGLRYIDDLGLYSTIFANQYDDAEPHVASWSLAYDALDHI 395
Query: 339 CTAYL--DAAWDLTQLIGSSTFNDDQRRLSQYAALFLPF-----RNTTYKDNKGKKIPVV 391
+ L D + ++ N+D+ + A F P+ R T + K I
Sbjct: 396 LSRVLKTDELRHIKRIKNILIRNEDETFYAWVMAAFTPWVTVPERVPTSRKQKPPIIARA 455
Query: 392 NYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPD-AS 450
RD+L+ + + + + ++ SL S++S D+P A+
Sbjct: 456 AEVARDNLRMENKIVNALKDATALFKEVSSLKSSVISK---------------DIPGTAA 500
Query: 451 KLRVLTGFLLREIKKFWRVALLISTL 476
++R G +R KK WR+ +L++ L
Sbjct: 501 EVRQHVGLQIRSWKKDWRLIVLMAML 526
>gi|242817434|ref|XP_002486954.1| tRNA nucleotidyltransferase [Talaromyces stipitatus ATCC 10500]
gi|218713419|gb|EED12843.1| tRNA nucleotidyltransferase [Talaromyces stipitatus ATCC 10500]
Length = 635
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 226/450 (50%), Gaps = 62/450 (13%)
Query: 70 IELTDTETKIFSCLLN-----------TLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIA 118
IELT E I LL+ R E VLR GGWVRDKLLG +DID+A
Sbjct: 96 IELTPIEKTIQRLLLDLKGYIEQKEKSEGRTAQEEMVLRFTGGWVRDKLLGVTSHDIDVA 155
Query: 119 LDNMMGSEFATKVAEYLSA---------TGETAPSG----FGVIPSNPDQSKHLETATMK 165
+ M G +F T + EYL E A + I +NP++SKHLET K
Sbjct: 156 ISTMTGLQFGTYLQEYLDDPDNLQKYMDNKELAFTSEMLKVHTIKANPEKSKHLETVATK 215
Query: 166 LYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRG 225
L+ L ID VNLR E Y+E+SR P + FGTAEEDA RRD T+N+LFYN+NTS +ED TG G
Sbjct: 216 LFGLDIDLVNLRKETYTEHSRNPQVEFGTAEEDALRRDATVNALFYNLNTSMLEDFTGLG 275
Query: 226 IADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAK 285
+ D++ I TPL P TF DDPLRVLR IRF +R + +DE+ ++A +D++K A K
Sbjct: 276 LDDMERKLIRTPLEPYQTFKDDPLRVLRLIRFASRLGYHIDEKTQEAMQNDDIKRAFKLK 335
Query: 286 ISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPL-QVEPEVLEGCEMFCTAYLD 344
IS+ERVG E++ + P + +I L L+ +F EP V + AY
Sbjct: 336 ISKERVGVEVEKTLRAADPRIGLRYIDDLGLYSTIFANQYDDAEPHVAS----WSLAYDA 391
Query: 345 AAWDLTQLIGSSTF------------NDDQRRLSQYAALFLPF-----RNTTYKDNKGKK 387
L++++ + N+D+ + A F P+ R T + K
Sbjct: 392 LDHILSRVLKTDELRHIKRIKNILIRNEDETFYAWVMAAFTPWVTVPERVPTSRKQKPPI 451
Query: 388 IPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVP 447
I RD+L+ + + + + ++ SL S++S D+P
Sbjct: 452 IARAAEVARDNLRMENKIVNALKDATALFKEVSSLKSSVISK---------------DIP 496
Query: 448 D-ASKLRVLTGFLLREIKKFWRVALLISTL 476
A+++R G +R KK WR+ +L++ L
Sbjct: 497 GTAAEVRQHVGLQIRSWKKDWRLIVLMAML 526
>gi|239607439|gb|EEQ84426.1| poly(A) polymerase [Ajellomyces dermatitidis ER-3]
Length = 545
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 216/419 (51%), Gaps = 59/419 (14%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG--------ETAPSGF 146
VLR AGGWVRDKLLG D +DID+A++ + G F + EYL G + PS
Sbjct: 53 VLRFAGGWVRDKLLGVDSHDIDVAINCITGERFGEGLKEYLDTPGNLEKYKAFHSDPSII 112
Query: 147 GVI-----PSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYR 201
I NP++SKHLETAT K++ L +D VNLR E Y+++SR P + GT EEDA R
Sbjct: 113 DCIRIHKIEKNPEKSKHLETATTKIFGLEVDLVNLRKETYTDDSRNPQIEIGTPEEDALR 172
Query: 202 RDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF 261
RD T+N+LFYNI+T +ED TG+G+ DL++ I TP+ P TF DDPLRVLR IRF +R
Sbjct: 173 RDATVNALFYNIHTDMIEDFTGKGLQDLENKIIRTPMAPFQTFKDDPLRVLRLIRFASRL 232
Query: 262 DFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ +D + ++A +++KAAL AKI++ER+G E++ + G P+ A+ I L L+ +F
Sbjct: 233 GYSIDSDTEEAMKIEDIKAALKAKITQERIGVEMEKTLRGPDPLTALQRINRLGLYDTIF 292
Query: 322 KLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLS--------------Q 367
+ + +++ LT L+ ST N D+ + + +
Sbjct: 293 A-------NHRDNAGVDTSSWERGYNALTLLLSESTGNIDESQKTREYVRDTLIRDENER 345
Query: 368 YAALFL----PFRNTTYKDNKGKK-----IPVVNYTFRDSLKRKASDAETVMNIHRVLEK 418
Y A FL P+ T D K +P RDSL+ A + + +
Sbjct: 346 YFAWFLTALAPW--VTIADPVPPKPSKPTVPRATTVARDSLRADNKAASIISAASKNYQT 403
Query: 419 FLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLL 477
+ S + E+ D P S+ RV G +R + WR+ +++ LL
Sbjct: 404 IWDIKSSFL------------KNEIADTP--SETRVKIGLFIRTLSHDWRLCFVLAMLL 448
>gi|225555945|gb|EEH04235.1| poly(A) polymerase [Ajellomyces capsulatus G186AR]
Length = 999
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/470 (32%), Positives = 228/470 (48%), Gaps = 65/470 (13%)
Query: 53 MSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLET--------------VLRV 98
MSE+ P V +I LT E + CLL+ VLR
Sbjct: 1 MSEERNMAPPAVP---RITLTPIEQTLRLCLLDAAEFIQQRGNQDPASVPTTPDPLVLRF 57
Query: 99 AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG-----ETAPSG-------- 145
AGGWVRDKLLG D +DID+A++ M G F + EYL G + SG
Sbjct: 58 AGGWVRDKLLGVDSHDIDVAINCMTGERFGEGLKEYLDMPGNLEKYKACHSGNPSIIDFI 117
Query: 146 -FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDL 204
I NP++SKHLETAT K++ L ID VNLR E YS++SR P + GT EEDA RRD
Sbjct: 118 KIHKIEKNPEKSKHLETATTKIFGLDIDLVNLRKETYSDDSRNPQIEIGTPEEDALRRDA 177
Query: 205 TINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFI 264
T+N+LFYNI+T ++ED TG+G+ D+++ I TPL P TF DDPLRVLR IRF +R +
Sbjct: 178 TVNALFYNIHTDTIEDFTGKGLQDMENKIIRTPLAPYQTFKDDPLRVLRLIRFASRLGYT 237
Query: 265 LDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
+D + ++A +++K AL AKI++ER+G E++ + G P+ A+ I L L+ +F
Sbjct: 238 IDSDTEEAMKIEDIKVALKAKITQERIGVEMEKTLRGPDPLTALQRINRLGLYDTIFA-- 295
Query: 325 LQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSST--------------FNDDQRRLSQYAA 370
+ + Y A L++ G+ T N+++R + + A
Sbjct: 296 -NHQDNAGVDTSHWERGYNALALLLSKSTGNMTESQKTRKHVRDILIRNENERYFAWFLA 354
Query: 371 LFLPF---RNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLV 427
P+ + + +P RDSL+ A + + + S +
Sbjct: 355 ALAPWTIVADPKPSKSSKPPVPRATTVARDSLRADNRAAGIISAASKNYRMIWDIKSSFL 414
Query: 428 SAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTLL 477
E+ D P +++RV G +R + WR+ +++ LL
Sbjct: 415 ------------KNEIADTP--AEMRVKMGQFIRSLSHDWRLCFVLAMLL 450
>gi|302698537|ref|XP_003038947.1| hypothetical protein SCHCODRAFT_47611 [Schizophyllum commune H4-8]
gi|300112644|gb|EFJ04045.1| hypothetical protein SCHCODRAFT_47611, partial [Schizophyllum
commune H4-8]
Length = 245
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/243 (50%), Positives = 160/243 (65%), Gaps = 12/243 (4%)
Query: 56 QEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHF----NLETVLRVAGGWVRDKLLGKD 111
Q P P + VR LT+ E K+ + L + ++ + T R+AGGWVRDKLLG
Sbjct: 9 QRVPIPQELSVR----LTEDEDKLCTLLDDCTKYLRDEKGINTSCRIAGGWVRDKLLGSQ 64
Query: 112 CYDIDIALDNMMGSEFATKVAEYLSATGETAPSG-FGVIPSNPDQSKHLETATMKLYDLW 170
DID+AL +++G FA ++E+ + G P G G I +NP+QSKHL TAT K++
Sbjct: 65 SNDIDVALSDVLGLTFAEHLSEFAKSRG--VPVGTIGEIKANPNQSKHLATATCKIHGYA 122
Query: 171 IDFVNLRCEDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADL 229
ID VNLR E Y+ +SRIPT M FGT +DA RRD+TIN+LFYNI+ +VED TG+G+ DL
Sbjct: 123 IDLVNLRSEQYATDSRIPTGMAFGTPLQDALRRDITINALFYNIHDRAVEDHTGKGLDDL 182
Query: 230 KHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRE 289
+ G + TPLPP+ TFLDDPLRVLR +RF RF F + EL AA V+ AL +KISRE
Sbjct: 183 RSGIVRTPLPPRETFLDDPLRVLRCLRFATRFGFDIVPELSDAAKDTVVQEALISKISRE 242
Query: 290 RVG 292
RVG
Sbjct: 243 RVG 245
>gi|452978851|gb|EME78614.1| hypothetical protein MYCFIDRAFT_143868 [Pseudocercospora fijiensis
CIRAD86]
Length = 880
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 166/302 (54%), Gaps = 45/302 (14%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLE--------------------TVLRVAGGWVRDKLL 108
K+ELT E + + LL+ +H + LR GGWVRDKLL
Sbjct: 17 KLELTPVEETLRTLLLDVAKHIDAAPSPPDAEGQVPVPDDLAKQPITLRFTGGWVRDKLL 76
Query: 109 GKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP------------------------- 143
G +DID+A++ M G +F ++ EYL G
Sbjct: 77 GVQSHDIDVAINKMTGYQFGLRLKEYLEIPGNLEKYGLESIAANEKQSQKAGATNKSKTL 136
Query: 144 SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRD 203
G I +NP++SKHLET TM++ L ID VNLR E YS++SR P M FGT EDA RRD
Sbjct: 137 GGLHKIEANPEKSKHLETTTMRILGLDIDLVNLRKETYSDDSRNPQMEFGTPVEDALRRD 196
Query: 204 LTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDF 263
T+N++FYNINT +ED TGRG D+ I TPL P TF DDPLRVLR IRF +R ++
Sbjct: 197 ATVNAMFYNINTEQIEDFTGRGHEDMAKKLIRTPLEPYQTFKDDPLRVLRLIRFASRLEY 256
Query: 264 ILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
+D+E +A ++++K L KISRERVGTE++ + G P +AM + L L+ +F
Sbjct: 257 TIDDETLQAMGNEDIKHELRRKISRERVGTELEKALLGPHPHEAMRLVFSLGLYDTIFSE 316
Query: 324 PL 325
P+
Sbjct: 317 PM 318
>gi|429864042|gb|ELA38426.1| tRNA nucleotidyltransferase [Colletotrichum gloeosporioides Nara
gc5]
Length = 530
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/272 (45%), Positives = 167/272 (61%), Gaps = 9/272 (3%)
Query: 61 PVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALD 120
PV+ + +L + ++ + + T R + VLR AGGWVRDKLLG + +DID A++
Sbjct: 11 PVLQLTAKEEQLKELLVEVAASIDKTCRPSDPPLVLRWAGGWVRDKLLGIESHDIDTAIN 70
Query: 121 NMMGSEFATKVAEYLSAT-----GETAPSGFGVI---PSNPDQSKHLETATMKLYDLWID 172
M G F+ K+ +Y + +P G I +NPD+SKHLETAT +++ L +D
Sbjct: 71 VMTGYTFSQKMRDYCDDSENRRKHNISPDDLGSIHKIAANPDKSKHLETATCRIFGLDVD 130
Query: 173 FVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHG 232
FVNLR E Y+++SR P M FGTAEEDA RRD TIN+LFYN++T +EDLTG G+ D+
Sbjct: 131 FVNLRKETYTQDSRNPIMEFGTAEEDAMRRDATINALFYNLHTGLIEDLTG-GLEDMASR 189
Query: 233 KIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVG 292
I TP+ P TF DDPLRVLR +RF +R DF +D A V AL KISRERVG
Sbjct: 190 LIRTPMSPLQTFTDDPLRVLRLVRFASRLDFDIDPAATAVMAEPSVLGALKLKISRERVG 249
Query: 293 TEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
E++ M+ G P KA+ I L L+ +F P
Sbjct: 250 VEVEKMLKGRHPRKALDLIHNLGLYEAIFTDP 281
>gi|70953437|ref|XP_745820.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526260|emb|CAH76727.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 638
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 166/288 (57%), Gaps = 23/288 (7%)
Query: 49 CKATMSEQE-PPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKL 107
C+A ++++ P + V DK +T E ++F L+ + L+T LRV GGWVRDK
Sbjct: 40 CQAENNKKDGEPIWDIETVIDK-AVTQRELELFEFLMKVNEQYKLDTTLRVVGGWVRDKF 98
Query: 108 LGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLY 167
L DIDI +DNM GS+F + EY+ E FG+I N DQSKHLET++ L+
Sbjct: 99 LNISNDDIDITVDNMKGSDFCNYIKEYIKDK-ENKNFNFGIIKINCDQSKHLETSSFNLF 157
Query: 168 DLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIA 227
+ +D VNLR E Y+E SRIP + GT EEDA RRD TINSLFYN+ VED T GI
Sbjct: 158 NFQVDIVNLRNETYTEESRIPEIAIGTPEEDALRRDFTINSLFYNLKNKKVEDYTKNGIH 217
Query: 228 DLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKIS 287
LK+ I TPL P TFLDDPLR++R IRF FDF LD+ + ++++K + KIS
Sbjct: 218 HLKNQIISTPLNPLTTFLDDPLRIIRCIRFCGYFDFNLDQSIFDVLKNEDIKKSFNKKIS 277
Query: 288 RERVGTEIDLMVSGNQPVKAMTHIC-----GLTLFWI------VFKLP 324
+ R+ +EI +K +H C LTL +FKLP
Sbjct: 278 KSRLASEI---------IKIFSHKCKNIVLSLTLLNYSNYSEEIFKLP 316
>gi|451856707|gb|EMD69998.1| hypothetical protein COCSADRAFT_77623 [Cochliobolus sativus ND90Pr]
Length = 915
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/362 (37%), Positives = 191/362 (52%), Gaps = 65/362 (17%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNL-------------------ETVLRVAGGWVRDKLLG 109
++ELT+ E+K+ LL+ + + + LR GGWVRDKLL
Sbjct: 11 QLELTEVESKLRLLLLDVAAYIDETPSKEDVSGVQVPAELAKEKITLRWTGGWVRDKLLN 70
Query: 110 KDCYDIDIALDNMMGSEFATKVAEYLSATG---------------------ETAPSGFGV 148
+DID+A++ M G F K+ EYL G + AP G
Sbjct: 71 IGSHDIDVAINKMTGEHFGLKMQEYLEIPGNAEKHGLIEKSDGLSARDKTKKIAP-GLHK 129
Query: 149 IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINS 208
I +NP++SK+LETAT K+ + +D VNLR E Y+E SR P M FGTAEEDA RRD T+N+
Sbjct: 130 IEANPEKSKNLETATTKIMGIDLDLVNLRKETYNEVSRNPQMEFGTAEEDAMRRDATVNA 189
Query: 209 LFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
+F+N++T VED TGRG AD+ I TPL P TF DDPLRVLR IRF +R D+ ++ E
Sbjct: 190 MFFNLHTCQVEDFTGRGHADMAAKIIRTPLEPYQTFKDDPLRVLRLIRFASRLDYTIEPE 249
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP---L 325
KA + E++ L KISRERVG E++ M+ G +P A+ I L+ VF P L
Sbjct: 250 TAKAMGNPEIQGVLKIKISRERVGIELEKMLKGPRPRMALELIDRFGLYRTVFTDPTREL 309
Query: 326 QVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTF------------NDDQRRLSQYAALFL 373
EPE TAY A+++ + + + N+D + L+ A +
Sbjct: 310 PTEPE---------TAYFKPAYEVVESVVTKEGDVPTVVPDTLLRNEDDKYLAWVCATMM 360
Query: 374 PF 375
P+
Sbjct: 361 PW 362
>gi|340521614|gb|EGR51848.1| hypothetical protein TRIREDRAFT_55099 [Trichoderma reesei QM6a]
Length = 516
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/271 (46%), Positives = 165/271 (60%), Gaps = 20/271 (7%)
Query: 70 IELTDTETKIFSCLLNTLR------HFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
++LT E ++ L+N + N VLR AGGWVRD+LLG + +DID+A++ M
Sbjct: 8 VQLTQREQQLRLLLVNVAQFIDSTAKLNQPVVLRWAGGWVRDRLLGIESHDIDVAINAMT 67
Query: 124 GSEFATKVAEYLSATGETAPSGF--------GVIPSNPDQSKHLETATMKLYDLWIDFVN 175
G +FA ++EY GF I SNPD+SKHLETA +KL+ + +DFVN
Sbjct: 68 GQQFAQHLSEYCKRPEAVETHGFLPGDVGRLHHIASNPDKSKHLETAMVKLFGMDLDFVN 127
Query: 176 LRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIV 235
LR E Y+E+SR P M FGT EEDA RRD TIN+LFYN++T VED TG GI DL I
Sbjct: 128 LRKETYAEDSRNPQMEFGTPEEDALRRDATINALFYNLHTEEVEDFTG-GIRDLDAKVIR 186
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
TP+ P TF+DDPLRVLR IRF +R F +D E +K + V AL KISRERVG E+
Sbjct: 187 TPMEPFQTFMDDPLRVLRLIRFASRLGFAIDAESEKFMNDERVLEALRKKISRERVGVEL 246
Query: 296 DLMVSGNQPVKAMTHICGLTLFWIVFKLPLQ 326
+ M+ A+ + L L+ +F PLQ
Sbjct: 247 EKMLK-----VALELLDRLGLYQAIFSDPLQ 272
>gi|451993799|gb|EMD86271.1| hypothetical protein COCHEDRAFT_1116038 [Cochliobolus
heterostrophus C5]
Length = 915
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/363 (38%), Positives = 193/363 (53%), Gaps = 67/363 (18%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLET--------------------VLRVAGGWVRDKLL 108
++ELT+ E+K+ LL+ + + ET LR GGWVRDKLL
Sbjct: 11 QLELTEVESKLRQLLLDVAAYID-ETPSKEDISGVQVPAELAKEKITLRWTGGWVRDKLL 69
Query: 109 GKDCYDIDIALDNMMGSEFATKVAEYLSATG---------------------ETAPSGFG 147
+DID+A++ M G F K+ EYL G + AP G
Sbjct: 70 NVGSHDIDVAINKMTGEHFGLKMQEYLEIPGNAEKHGLIEKSDGLSARDKTKKIAP-GLH 128
Query: 148 VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTIN 207
I +NP++SK+LETAT K+ + +D VNLR E Y+E SR P M FGTAEEDA RRD T+N
Sbjct: 129 KIEANPEKSKNLETATTKIMGIDLDLVNLRKETYNEVSRNPQMEFGTAEEDAMRRDATVN 188
Query: 208 SLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDE 267
++F+N++T VED TGRG AD+ I TPL P TF DDPLRVLR IRF +R D+ ++
Sbjct: 189 AMFFNLHTCQVEDFTGRGHADMAAKIIRTPLEPYQTFKDDPLRVLRLIRFASRLDYTIEP 248
Query: 268 ELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP--- 324
E KA + E++ L KISRERVG E++ M+ G +P A+ I L+ VF P
Sbjct: 249 ETAKAMGNTEIQEVLKIKISRERVGIELEKMLKGPRPRLALELIDRFGLYRTVFTDPTRE 308
Query: 325 LQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTF------------NDDQRRLSQYAALF 372
L EPE TAY A+++ + + + + N+D + L+ A
Sbjct: 309 LPTEPE---------TAYFKLAYEVVESVVTKSGDVPTVFPDTLLRNEDDKYLAWVCATM 359
Query: 373 LPF 375
+P+
Sbjct: 360 MPW 362
>gi|297813035|ref|XP_002874401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297320238|gb|EFH50660.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 243
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/167 (65%), Positives = 131/167 (78%), Gaps = 4/167 (2%)
Query: 169 LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIAD 228
L +FVNL+ E+Y+ENSRIPTM+FGTA+E+AYRRDLTINSLFY INT VEDLT RGI D
Sbjct: 68 LGKEFVNLKSEEYTENSRIPTMKFGTAKENAYRRDLTINSLFYKINTGLVEDLTDRGIKD 127
Query: 229 LKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISR 288
LK GKIV PLP + TFLDDPLRV+RAIRFGARF F LDEEL +AA+S+EVK AL KISR
Sbjct: 128 LKSGKIVRPLPARVTFLDDPLRVIRAIRFGARFGFTLDEELNEAASSEEVKVALGGKISR 187
Query: 289 ERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGC 335
E++G EI+ M+SG++PV A+T + L LF +VF EP E C
Sbjct: 188 EQIGNEIESMISGSEPVSAITCLYDLKLFGVVFAF----EPTPSENC 230
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 64 VQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKD 111
V++++KI+L + E KIF+ LL TL H NL+T LRVAGGWV KLLGK+
Sbjct: 24 VELKEKIDLAEKERKIFNRLLGTLCHCNLDTQLRVAGGWVPGKLLGKE 71
>gi|425777901|gb|EKV16053.1| TRNA nucleotidyltransferase [Penicillium digitatum Pd1]
gi|425779970|gb|EKV17993.1| TRNA nucleotidyltransferase [Penicillium digitatum PHI26]
Length = 577
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 230/450 (51%), Gaps = 60/450 (13%)
Query: 70 IELTDTETKIFSCLLNTLRHF--------------NLETVLRVAGGWVRDKLLGKDCYDI 115
IELT E+ + + LL+ ++ + ETVLR GGWVRDKLLG +D+
Sbjct: 39 IELTPLESTLRTLLLDVAQYITEQQTTKEGIAVNDHSETVLRFTGGWVRDKLLGIGSHDV 98
Query: 116 DIALDNMMGSEFATKVAEYLSATG-----ETAPSG--------FGVIPSNPDQSKHLETA 162
D+ + NM G +F + +YL + P+G I +NP++SKHLET
Sbjct: 99 DVGISNMTGYQFGMALKDYLDIPENLEKYKKGPNGEMHDAIVSLHKIEANPEKSKHLETV 158
Query: 163 TMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLT 222
T K++ L ID VNLR E Y+++SR P M FGTA EDA RRD TIN+LFYN+N S +EDLT
Sbjct: 159 TTKIFGLDIDLVNLRKETYTDDSRNPQMEFGTAVEDALRRDATINALFYNLNESRLEDLT 218
Query: 223 GRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAAL 282
RG+ D+K I P+ P TF DDPLRVLR IRF +R + ++ E + A ++++ AL
Sbjct: 219 ERGLDDMKKNTIRCPMEPYQTFKDDPLRVLRLIRFASRLGYRIEPETEAAMQIEDIREAL 278
Query: 283 AAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAY 342
KIS+ERVG E++ M+ G+ P A+ I L LF +F + +V + AY
Sbjct: 279 KLKISKERVGAELEKMLRGSDPRGALQFIDRLQLFPTIFA---NHQDDVKADTSTWPLAY 335
Query: 343 LDAAWDLTQLIG-SSTFNDDQRRLSQ----------YA---ALFLPFRNTTYKDNKGKK- 387
A L G S +RL + YA A F P+ + + KG K
Sbjct: 336 NTLARLLHPEAGDSEELRTVTKRLREILFRDETTIYYAWMIATFAPWTSIPGRAGKGTKP 395
Query: 388 -IPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDV 446
P RDSL+ SD +T +N R +L + + + + EL
Sbjct: 396 VPPRAVEVGRDSLR---SDNKT-LNALRA--------AALHYKDTIAIKTCLLANELSGT 443
Query: 447 PDASKLRVLTGFLLREIKKFWRVALLISTL 476
P +++R G +R K W++ +L++ L
Sbjct: 444 P--AEIRQRIGLQMRSWNKDWKLCILLAIL 471
>gi|396465098|ref|XP_003837157.1| similar to tRNA nucleotidyltransferase [Leptosphaeria maculans JN3]
gi|312213715|emb|CBX93717.1| similar to tRNA nucleotidyltransferase [Leptosphaeria maculans JN3]
Length = 958
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 243/490 (49%), Gaps = 63/490 (12%)
Query: 37 TVNTTRNLGFLRCKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVL 96
T +T N+G ++ + T E + R +++ V + I+ + + T+ + + N + +L
Sbjct: 33 TKSTESNMGSVQLELTEVESKLRR-LLLDVAEYIDGSSSSTEQITSVQVPEEVANEKIIL 91
Query: 97 RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG----------------- 139
R GGWVRDKLL + +DID+A++ + G F K+ EYL G
Sbjct: 92 RWTGGWVRDKLLNIESHDIDLAINKLTGEHFGLKMQEYLRIPGNAEKHGLIAEGEKLSDS 151
Query: 140 ----ETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
+ AP G I +NP++SK+LETAT K+ + +D VNLR E Y+E SR P M FGTA
Sbjct: 152 DRTKKIAP-GLHKIEANPEKSKNLETATTKILGIDLDLVNLRKETYNEVSRNPQMEFGTA 210
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
EEDA RRD T+N++FYN++T VED T RG D+ I TPL P TF DDPLRVLR I
Sbjct: 211 EEDAMRRDATVNAMFYNLHTCEVEDFTKRGHEDMAARIIRTPLEPYQTFKDDPLRVLRLI 270
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLT 315
RF +R D+ ++ E KA + E++ L KISRERVG E++ M+ G + A+ I
Sbjct: 271 RFASRLDYTIEPETAKAMGNPEIQDVLKIKISRERVGIELEKMLKGPRSRMALELIDRFG 330
Query: 316 LFWIVFKLP---LQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSST------------FND 360
L+ VF P L EPE TAY A+D + I + ND
Sbjct: 331 LYRTVFTDPTRDLACEPE---------TAYFQLAYDFVESIVTKADDIPSKIPDNLLRND 381
Query: 361 DQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFL 420
D++ L+ + +P+ + IP T R E ++V +
Sbjct: 382 DEKYLAWVCSTVMPWADAPM-------IPHPKPTQRPLFAAYLVAREGFKAPNKVCDVIT 434
Query: 421 SLIPSLVSAEDVKVNDGQWSKEL-----VDVPDASKLRVLTGFLLREIKKFWRVALLIST 475
+ SL +E+++ + Q +K L +D + R G +R WR +L +
Sbjct: 435 A---SLSHSEEIRNHVAQCAKGLRRPDTIDPSNDFTARDTLGMAIRRWGPTWRTQVLFN- 490
Query: 476 LLYPTHVDHT 485
+LY +D T
Sbjct: 491 MLYEVVLDRT 500
>gi|189206463|ref|XP_001939566.1| tRNA nucleotidyltransferase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975659|gb|EDU42285.1| tRNA nucleotidyltransferase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 897
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 189/362 (52%), Gaps = 65/362 (17%)
Query: 69 KIELTDTETKIFSCLLNTLRHF-------------------NLETVLRVAGGWVRDKLLG 109
++ELT+ ETK+ LL+ + N + LR GGWVRDKLL
Sbjct: 10 QLELTEVETKLRQLLLDVAAYIDEAPSNGDATAVQVPEHLANEKITLRWTGGWVRDKLLK 69
Query: 110 KDCYDIDIALDNMMGSEFATKVAEYLSATG---------------------ETAPSGFGV 148
DID+A++ M G F K+ EYL G + AP G
Sbjct: 70 VGSNDIDVAINKMTGEHFGLKMQEYLEIPGNAEKHGLIEPNDDLDARDKTKKIAP-GLHK 128
Query: 149 IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINS 208
I +NP++SK+LETAT K+ + +D VNLR E Y+E SR P M FGTAEEDA RRD T+N+
Sbjct: 129 IEANPEKSKNLETATTKIMGIDLDLVNLRKETYNEVSRNPQMEFGTAEEDAMRRDATVNA 188
Query: 209 LFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
+FYN++T VED TGRG D+ I TPL P TF DDPLRVLR IRF +R D+ ++ E
Sbjct: 189 MFYNLHTCQVEDFTGRGHDDMAAKIIRTPLEPYQTFKDDPLRVLRLIRFASRLDYTIEPE 248
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP---L 325
KA + +++ L KISRERVG E++ M+ G +P A+ I L+ VF P L
Sbjct: 249 TAKAMGNADIQDVLKIKISRERVGIELEKMLKGPRPRMALELIDRFGLYRTVFTDPTREL 308
Query: 326 QVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTF------------NDDQRRLSQYAALFL 373
EPE TAY A+D + + + N+D++ L+ A +
Sbjct: 309 PTEPE---------TAYFTPAYDFVESVVKKSGEVPTAIPDILMRNEDEKYLAWVCATMM 359
Query: 374 PF 375
P+
Sbjct: 360 PW 361
>gi|367022262|ref|XP_003660416.1| hypothetical protein MYCTH_2298716 [Myceliophthora thermophila ATCC
42464]
gi|347007683|gb|AEO55171.1| hypothetical protein MYCTH_2298716 [Myceliophthora thermophila ATCC
42464]
Length = 541
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 151/238 (63%), Gaps = 9/238 (3%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGF-------- 146
VLR AGGWVRDKLLG + +DID A++ M G F + Y G
Sbjct: 58 VLRWAGGWVRDKLLGTESHDIDTAINAMTGEAFVDGLRAYCDEPDRRERHGLRAEDVGRL 117
Query: 147 GVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTI 206
+P NPD+SKHL T+T++L L +DFVNLR E Y+E SR PT+ FGTAEEDA RRD T+
Sbjct: 118 HTVPRNPDKSKHLATSTIRLCGLDVDFVNLRRETYTEESRNPTVEFGTAEEDALRRDATV 177
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
N+LFYN++T VEDL G G+ADL H I TP+ P TFLDDPLRVLR +RF +R F +D
Sbjct: 178 NALFYNLHTGQVEDLVG-GLADLGHRLIRTPMDPLQTFLDDPLRVLRLVRFASRLGFRID 236
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
++ A + V L KISRER+G E++ M+ G +PV+A+ I L L+ VF P
Sbjct: 237 PAAEEVMADERVLGMLKVKISRERIGVELEKMLKGKRPVEALRLIDRLGLYHAVFTDP 294
>gi|169611692|ref|XP_001799264.1| hypothetical protein SNOG_08960 [Phaeosphaeria nodorum SN15]
gi|160702347|gb|EAT84128.2| hypothetical protein SNOG_08960 [Phaeosphaeria nodorum SN15]
Length = 875
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 131/314 (41%), Positives = 175/314 (55%), Gaps = 42/314 (13%)
Query: 69 KIELTDTETKIFSCLLNTLRHFN-------------------LETVLRVAGGWVRDKLLG 109
++ELT+ E+K+ LL+ + + +T LR GGWVRDKLL
Sbjct: 43 QLELTEVESKLRRLLLDVAAYIDDAPAKEDMTGVEVPEELARQKTTLRWTGGWVRDKLLK 102
Query: 110 KDCYDIDIALDNMMGSEFATKVAEYLSATGET---------------------APSGFGV 148
DID+A++NM G F K+ EYL G AP G
Sbjct: 103 VGSQDIDLAINNMTGEHFGLKMQEYLEIPGHAEKHDLLGKDDQSKAHEKSKNIAP-GLHK 161
Query: 149 IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINS 208
I +NP++SK+LETAT K+ + +D VNLR E Y+E SR P M FGTAEEDA RRD TIN+
Sbjct: 162 IEANPEKSKNLETATTKIMGIDLDLVNLRKETYNEVSRNPQMEFGTAEEDAMRRDATINA 221
Query: 209 LFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
+FYN++T VED T +G D+ I TPL P TF DDPLRVLR IRF +R D++++ E
Sbjct: 222 MFYNLHTCEVEDFTQQGFNDMAAKLIRTPLEPTQTFKDDPLRVLRLIRFASRLDYVIEAE 281
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVE 328
KA E++ L KISRERVG E++ M+ G +P A+ I L+ VF P +V
Sbjct: 282 TAKAMGDPEIQDVLKIKISRERVGIELEKMLRGPRPRMALELIDRFGLYKTVFTDPTRVL 341
Query: 329 PEVLEGCEMFCTAY 342
P E E+F ++Y
Sbjct: 342 PSDPE-TELFKSSY 354
>gi|209880381|ref|XP_002141630.1| poly(A) polymerase family protein [Cryptosporidium muris RN66]
gi|209557236|gb|EEA07281.1| poly(A) polymerase family protein [Cryptosporidium muris RN66]
Length = 674
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 205/419 (48%), Gaps = 68/419 (16%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKD----------------- 111
K+ELT+ E +F+ L + ++ T++RVAGGWVRDKLL K
Sbjct: 61 KLELTEEEQDLFNLLNEFVYSTSINTIMRVAGGWVRDKLLNKLDILNNLQHDNGNIQSKE 120
Query: 112 ----------------CYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
DIDIA+DNM G FA K +L G+I +PD+
Sbjct: 121 NAIIEHSIPKFVPVSLSKDIDIAIDNMSGKSFAEKFDTWLQQKYSYPRISIGIIAKDPDK 180
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
SKHLETAT+K + +D VNLR E Y+++SRIP ++ G EEDA RRD TINS+FYNIN
Sbjct: 181 SKHLETATLKYGEFSLDIVNLRTETYTKDSRIPIIKCGLPEEDALRRDFTINSMFYNINN 240
Query: 216 SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+ED T +G+ DL + I TPL P T LDDPLRVLRA RF AR F LD EL +A
Sbjct: 241 GKLEDFTKKGLEDLYNQVIRTPLNPIQTLLDDPLRVLRAFRFAARLHFRLDNELLEACNE 300
Query: 276 DEVKAALAAKISRERVGTEIDLMVSG---NQPVKAMTHICGLTLFWIVFKLP-------- 324
+ ALA K+SRER+G E+ MV+ P + I L VFKLP
Sbjct: 301 PALNEALATKVSRERIGAEVHEMVTNLSIGNPAIGLRMITNSGLADSVFKLPNTKIFHYN 360
Query: 325 ------------LQVEPEVLEGCE-MFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAAL 371
++ P V+E C + + L A+ + + ++ Y A
Sbjct: 361 DKSICVIPPKKWYELGPFVVEICHRLIELSELKDAFKSILVFDKC----ENWVITTYGAF 416
Query: 372 FLPFRNTTYKDNKGKKIPVVNYTFRDSLK--RKASDAETVMNIHRVLEKFLSLIPSLVS 428
LP +K K+ +V DSLK + SDA + +LE S +P +++
Sbjct: 417 CLPLAEYRCISSKDKETTLVKMILTDSLKLPNRISDA-----VSTLLESLFSTLPLILN 470
>gi|46116880|ref|XP_384458.1| hypothetical protein FG04282.1 [Gibberella zeae PH-1]
Length = 575
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/269 (46%), Positives = 163/269 (60%), Gaps = 15/269 (5%)
Query: 70 IELTDTETKIFSCLLNTLRHFN------LETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
I+LT E ++ LL+ R + VLR AGGWVRDKLL +DID+A++ M
Sbjct: 42 IQLTPKEEQLRRLLLDVARSIDDSRQASEPIVLRWAGGWVRDKLLNIQSHDIDVAINAMT 101
Query: 124 GSEFATKVAEYLSATGETAPSGFGV--------IPSNPDQSKHLETATMKLYDLWIDFVN 175
G FA + +Y A G + NP++SKHLETA +K++ L +DFVN
Sbjct: 102 GVPFAQAMCDYCEQPDAMAKHSIGPADIGNLHNVARNPEKSKHLETAMVKMFGLDLDFVN 161
Query: 176 LRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIV 235
LR E Y+E+SR P M FGTAEEDA RRD T+N+LFYN++ VED TG G+AD+ I
Sbjct: 162 LRKETYTEDSRNPQMEFGTAEEDARRRDATVNALFYNLHDDRVEDFTG-GLADMDAKIIR 220
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
TPL P TF+DDPLRVLR +RF +R F ++ E +K A +V AL AKISRERVG E
Sbjct: 221 TPLEPFQTFMDDPLRVLRLVRFASRLQFEIEPETRKFMADPKVLEALRAKISRERVGVEY 280
Query: 296 DLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
+ M+ G P +++ I L LF +F P
Sbjct: 281 EKMLKGAHPHQSLELIDELQLFHAIFTDP 309
>gi|124804037|ref|XP_001347883.1| tRNA nucleotidyltransferase, putative [Plasmodium falciparum 3D7]
gi|23496136|gb|AAN35796.1| tRNA nucleotidyltransferase, putative [Plasmodium falciparum 3D7]
Length = 791
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 152/255 (59%), Gaps = 11/255 (4%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL 135
E +F L + +NL LRV GGWVRDK L + DIDI +DNM G+EF + EY+
Sbjct: 181 EENLFEFLKSVNERYNLNCTLRVVGGWVRDKFLNINNDDIDITVDNMKGAEFCNYIKEYI 240
Query: 136 SATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
E FG+I N DQSKHLET++ L++ +D VNLR E Y+E SRIP + GT
Sbjct: 241 KEK-ENKNFNFGIIKINSDQSKHLETSSFNLFNFQVDIVNLRNEKYTEESRIPEIVIGTP 299
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
EEDA RRD T+NSLFYN+ VED T +GI LK+ I TPL P ATFLDDPLR++R I
Sbjct: 300 EEDALRRDFTVNSLFYNLKNKKVEDYTEKGIFHLKNHIISTPLEPLATFLDDPLRIVRCI 359
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLT 315
RF F+F L++ + ++++K A KIS+ R+ +EI + S K I LT
Sbjct: 360 RFCGFFNFFLEKSIFNVLKNEDIKKAFTKKISKSRLSSEIVKIFSA----KCKNVILSLT 415
Query: 316 LFWI------VFKLP 324
L +F+LP
Sbjct: 416 LLNYSSYSSKIFQLP 430
>gi|378755138|gb|EHY65165.1| tRNA-nucleotidyltransferase [Nematocida sp. 1 ERTm2]
Length = 461
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 162/270 (60%), Gaps = 10/270 (3%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL 135
E ++F LL L+ RVAGGWVRDKL+ C DIDIA+D G+ F EYL
Sbjct: 8 EERLFRELLMYNEELGLQMTFRVAGGWVRDKLMQIPCDDIDIAIDKSSGAVFTNGFMEYL 67
Query: 136 SATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
+ G+ VI N ++SKHLETA++K L +DFV LR E+Y+E +RIP +R GT
Sbjct: 68 QRKSQEV-HGYHVIECNHEKSKHLETASLKYMGLSVDFVALRTEEYTE-TRIPIVRTGTP 125
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
+EDA RRD+TIN+LFYNINT S+ED TGRG++D+K GKI TPL P TFLDDPLR+LR +
Sbjct: 126 QEDANRRDITINALFYNINTKSIEDYTGRGLSDIKEGKIRTPLDPMETFLDDPLRILRVL 185
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLT 315
RF +R F + E+ + ++ + L +S+ERVG EI + KA+ +
Sbjct: 186 RFASRLSFEIVPEILRVLGEKKLHSKLTQVVSKERVGYEIKKTLLQEGYKKALAALAEYQ 245
Query: 316 LFWIVFKLPLQVEPEVLEGCEMFCTAYLDA 345
+ +F P+ CE C ++DA
Sbjct: 246 IAQALF-------PDAAVTCEEVCR-FMDA 267
>gi|340960357|gb|EGS21538.1| tRNA nucleotidyltransferase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 552
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 150/238 (63%), Gaps = 9/238 (3%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFG------- 147
VLR AGGWVRDKLLG +DID A+++M G F + +Y A G
Sbjct: 63 VLRWAGGWVRDKLLGITSHDIDTAINSMTGEAFVDGLRDYCDDPANKAKHGLHDDDIGRL 122
Query: 148 -VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTI 206
+P NPD+SKHL T+T+KL L +DFVNLR E Y+++SR P + FGTAEEDA RRD TI
Sbjct: 123 HTVPRNPDKSKHLATSTIKLCGLDVDFVNLRKETYADDSRNPEVEFGTAEEDALRRDATI 182
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
N+LFYN+NT +ED TG G+ADL+ G I TP+ P TFLDDPLRVLR +RF +RF F +D
Sbjct: 183 NALFYNLNTGKIEDFTG-GVADLQAGLIRTPMEPLQTFLDDPLRVLRLVRFASRFGFRID 241
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
E + + V L KISRER+G E++ M+ V A+ I L L+ VF P
Sbjct: 242 EAAESVMGDERVLENLKIKISRERIGVELEKMMKDANAVAALRFIDRLGLYHAVFTDP 299
>gi|330937476|ref|XP_003305586.1| hypothetical protein PTT_18480 [Pyrenophora teres f. teres 0-1]
gi|311317307|gb|EFQ86312.1| hypothetical protein PTT_18480 [Pyrenophora teres f. teres 0-1]
Length = 902
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 227/470 (48%), Gaps = 81/470 (17%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNL-------------------ETVLRVAGGWVRDKLLG 109
++ELT+ ETK+ LL+ + + + LR GGWVRDKLL
Sbjct: 10 QLELTEVETKLRQLLLDVAAYIDEAPSNGDATAVQVPEQLAKEKITLRWTGGWVRDKLLK 69
Query: 110 KDCYDIDIALDNMMGSEFATKVAEYLSATG---------------------ETAPSGFGV 148
DID+A++ M G F K+ EYL G + AP G
Sbjct: 70 VGSNDIDVAINKMTGEHFGLKMQEYLEIPGNAEKHGLIEPNDDLNARDKTKKIAP-GLHK 128
Query: 149 IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINS 208
I +NP++SK+LETAT K+ + +D VNLR E Y+E SR P M FGTAEEDA RRD T+N+
Sbjct: 129 IEANPEKSKNLETATTKIMGIDLDLVNLRKETYNEVSRNPQMEFGTAEEDAMRRDATVNA 188
Query: 209 LFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
+FYN++T VED TGRG D+ I TPL P TF DDPLRVLR IRF +R D+ ++ E
Sbjct: 189 MFYNLHTCQVEDFTGRGHDDMAAKIIRTPLEPYQTFKDDPLRVLRLIRFASRLDYTIEPE 248
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVE 328
KA + +++ L KISRERVG E++ M+ G +P A+ I L+ VF P +V
Sbjct: 249 TAKAMGNADIQDVLKIKISRERVGIELEKMLKGPRPRMALELIDRFGLYRTVFTDPTRVL 308
Query: 329 PEVLEGCEMFCTAYLDAAWDLTQLIGSSTF------------NDDQRRLSQYAALFLPFR 376
P E TAY A++ + + + N+D++ L+ A +P+
Sbjct: 309 PTEPE------TAYFTRAYEFVETVVKKSGEVPTVIPNTLLRNEDEKYLAWVCATMMPWA 362
Query: 377 NT-TYKDNKGKKIP--VVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVK 433
+ T K + P + R+ K +TV SL + E+++
Sbjct: 363 DAPTVPHQKPLQRPYFIAYLVAREGFKAPNKICDTVAT-------------SLSNGEEIR 409
Query: 434 VNDGQWSKEL-----VDVPDASKLRVLTGFLLREIKKFWRVALLISTLLY 478
Q +K L VD + R G +R WR +L + L+Y
Sbjct: 410 NLVAQCAKGLGRPDSVDPTNDGTARDTLGMAIRRWGSTWRTQVLFN-LVY 458
>gi|116195956|ref|XP_001223790.1| hypothetical protein CHGG_04576 [Chaetomium globosum CBS 148.51]
gi|88180489|gb|EAQ87957.1| hypothetical protein CHGG_04576 [Chaetomium globosum CBS 148.51]
Length = 528
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 151/238 (63%), Gaps = 9/238 (3%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETA-----PSGFG-- 147
VLR AGGWVRDKLLG +DID AL M G EF ++ +Y P G
Sbjct: 46 VLRWAGGWVRDKLLGIPSHDIDTALSAMTGEEFVDRLRDYCDEPAHRERHALLPDDVGRL 105
Query: 148 -VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTI 206
+P NPD+SKHL T+T+KL L +DFVNLR E Y+E+SR P + FGTAEEDA RRD ++
Sbjct: 106 HTVPRNPDKSKHLATSTIKLCGLDVDFVNLRRETYTESSRNPVVEFGTAEEDALRRDASV 165
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
N+LFYN+ T VED G G+ADL+ G I TPL P TFLDDPLRVLR +RF +R F +D
Sbjct: 166 NALFYNLGTGMVEDFVG-GLADLEAGLIRTPLEPLQTFLDDPLRVLRLVRFASRLGFKID 224
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
++ + V L KISRER+G E++ M+ G +PV+++ I L L+ VF P
Sbjct: 225 PAAEQVMGDERVLGNLKVKISRERIGVELEKMMKGKKPVESLRLIDRLGLYHAVFTDP 282
>gi|71027783|ref|XP_763535.1| tRNA nucleotidyltransferase [Theileria parva strain Muguga]
gi|68350488|gb|EAN31252.1| tRNA nucleotidyltransferase, putative [Theileria parva]
Length = 605
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 170/262 (64%), Gaps = 10/262 (3%)
Query: 67 RDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSE 126
R K ++T++E ++F+ L + ++L+ LRV GGWVRDKLL K+ DIDIA+ M G +
Sbjct: 140 RAKFKITESENRLFNLLNECVDFYDLQMDLRVVGGWVRDKLLDKNNKDIDIAIPKMTGIK 199
Query: 127 FATKVAEYLSATGETAPSGF----GVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYS 182
F EYL+ + GF GV+ P+QSKHLETATM L +DFVNLR EDYS
Sbjct: 200 FC----EYLNNFTKDK-YGFSRTVGVVKRCPEQSKHLETATMNLLGFDVDFVNLRTEDYS 254
Query: 183 ENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKA 242
N+RIP M+ GT EDA RRD T+NSLFYNI+ + +ED TG G+ DLK+G I T P
Sbjct: 255 SNTRIPDMKIGTPLEDAMRRDFTVNSLFYNISKNFIEDFTGTGLEDLKNGIIRTCSSPFE 314
Query: 243 TFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN 302
TF+DDPLR++RA+RF +RF+F LDE+L + +++V AL+ K++R R+ EI+ ++ +
Sbjct: 315 TFMDDPLRLIRAVRFSSRFNFELDEKLTD-SINEQVLKALSQKVTRPRISQEIENILLKS 373
Query: 303 QPVKAMTHICGLTLFWIVFKLP 324
+A + + ++ +P
Sbjct: 374 DVSEAFNLMYKFKILHVLLNVP 395
>gi|310798238|gb|EFQ33131.1| poly A polymerase head domain-containing protein [Glomerella
graminicola M1.001]
Length = 550
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 147/393 (37%), Positives = 212/393 (53%), Gaps = 36/393 (9%)
Query: 51 ATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLET------VLRVAGGWVR 104
AT S + V V K+ L+ E ++ L++ + VLR AGGWVR
Sbjct: 3 ATTSNGTTTKAVAPTVPPKLSLSAKEEQLKDLLVDVAAFIDASGRSPEPLVLRWAGGWVR 62
Query: 105 DKLLGKDCYDIDIALDNMMGSEFATKVAEYLSA-----TGETAPSGFGV---IPSNPDQS 156
DKLLG + +DID A++ M G F+ ++ Y + T + P G I +NPD+S
Sbjct: 63 DKLLGIESHDIDTAINAMTGYAFSLELRNYCAQDEHAKTHKIGPDDMGSLHRISANPDKS 122
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
KHLETAT +++ L +DFVNLR E Y+++SR P + FGTAEEDA RRD TIN+LFYN++T
Sbjct: 123 KHLETATTRMFGLDVDFVNLRKETYTQDSRNPMVEFGTAEEDALRRDATINALFYNLHTG 182
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
VEDLTG G+AD+K I TP+ P TF DDPLRVLR +RF +R DF +D A
Sbjct: 183 LVEDLTG-GLADMKSRLIRTPMDPFQTFTDDPLRVLRLVRFASRLDFSIDPAATAVMADA 241
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVE---PEVLE 333
V AL KISRERVG E++ M+ G +P ++ I L L+ +F P ++ P++ +
Sbjct: 242 RVLDALKLKISRERVGVEMEKMLKGKRPHSSLDLIRTLGLYEAIFMDPNNIQQPRPDLSK 301
Query: 334 G-------CEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGK 386
C + C + + +D+ L+ S D+ + A +P+ + + N K
Sbjct: 302 WRMVYDLLCSLACNSVPGSIYDV--LVKS----DEAAYYAWNLAAVIPYSHVENEINLPK 355
Query: 387 K---IPVVNYTFRDSLK--RKASDAETVMNIHR 414
+P+ R+ +K K D T HR
Sbjct: 356 SRVTLPLTTLVAREGIKAPNKLCDVITAAYRHR 388
>gi|302406689|ref|XP_003001180.1| tRNA nucleotidyltransferase [Verticillium albo-atrum VaMs.102]
gi|261359687|gb|EEY22115.1| tRNA nucleotidyltransferase [Verticillium albo-atrum VaMs.102]
Length = 594
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 180/309 (58%), Gaps = 19/309 (6%)
Query: 31 SFRNIFTVNTTRNLGFLRCKATMSEQEPPRPVVVQVRD----KIELTDTETKIFSCLLNT 86
R I + R L C + RP D +++LT+ E ++ L++
Sbjct: 13 QHRQIISSVMKRKLAQSACASRFPPSARLRPNNAMAADASTIQLQLTERERQLRDLLIDV 72
Query: 87 LRHFNLET------VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEY-----L 135
+ N+ +LR AGGWVRDKLLG +DID+A++ M G F ++ EY L
Sbjct: 73 SKFININDQLPEPLILRWAGGWVRDKLLGTTSHDIDVAINVMTGLRFGERLREYCDVPEL 132
Query: 136 SATGETAPSGFG---VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRF 192
++ P G I +NP++SK+LET T+K++ L +DFVNLR E Y+E+SR P + F
Sbjct: 133 ASRHGIEPDDIGNLHRIAANPEKSKNLETTTVKVFGLDLDFVNLRTETYAEDSRNPAIDF 192
Query: 193 GTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVL 252
GTAEEDA RRD T+N+LF+N++T VED TG G+AD++ I TPL P TF+DDPLRVL
Sbjct: 193 GTAEEDALRRDATVNALFFNLHTERVEDFTG-GLADMRDRLIRTPLEPFQTFMDDPLRVL 251
Query: 253 RAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
R +RF +R F +D + A V AAL KISRERVG E++ M+ G+ P +A+ I
Sbjct: 252 RLVRFASRLGFAIDPAARDVMADPNVLAALRIKISRERVGVELEKMMKGHDPHRALQLID 311
Query: 313 GLTLFWIVF 321
L L ++
Sbjct: 312 ELGLHHAIY 320
>gi|121716898|ref|XP_001275945.1| poly(A) polymerase [Aspergillus clavatus NRRL 1]
gi|119404102|gb|EAW14519.1| poly(A) polymerase [Aspergillus clavatus NRRL 1]
Length = 635
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/241 (47%), Positives = 149/241 (61%), Gaps = 14/241 (5%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL------SATGETAPSG--- 145
VLR GGWVRDKLLG D +DID+ + +M G +F + YL P+G
Sbjct: 152 VLRFTGGWVRDKLLGVDSHDIDVGISSMTGYQFGMALKTYLDDPENLEKYKRNHPNGELK 211
Query: 146 -----FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
I +NP++SKHLET T K++ L ID VNLR E Y++ SR P M FGTAEEDA
Sbjct: 212 EAIVSLHKIEANPEKSKHLETVTTKIFGLDIDLVNLRKETYTDESRNPQMEFGTAEEDAM 271
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD TIN+LFYN+N S VED TGRG D+++ I TPL P TF DDPLRVLR IRF +R
Sbjct: 272 RRDATINALFYNLNESKVEDFTGRGFEDMRNKIIRTPLEPYQTFKDDPLRVLRLIRFASR 331
Query: 261 FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIV 320
+ +D + A + ++ AL KIS+ERVGTE++ M+ G P A+ I + L+ +
Sbjct: 332 LGYNIDANTQLAMQNSDISTALKQKISKERVGTELEKMLKGPDPRGALHLIDQIGLYPTI 391
Query: 321 F 321
F
Sbjct: 392 F 392
>gi|402469021|gb|EJW04089.1| hypothetical protein EDEG_01611 [Edhazardia aedis USNM 41457]
Length = 458
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/268 (45%), Positives = 156/268 (58%), Gaps = 6/268 (2%)
Query: 65 QVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMG 124
++ KI L + E +F + + + NL RVAGGWVRDKLL D YDIDI LD + G
Sbjct: 5 KLNKKIVLNEKEKLLFDDIKSLITSKNLGITPRVAGGWVRDKLLNLDNYDIDITLDTVSG 64
Query: 125 SEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSEN 184
EFA E S G+I NP++SKHLETATM + + IDF+ LR E Y ++
Sbjct: 65 YEFAILFKE----NSHEKTSSIGLIKMNPEKSKHLETATMFVNGMSIDFLQLRTEKYLDS 120
Query: 185 SRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATF 244
SRIPT+ G ED++RRD+TIN+LFYNI T +ED T G+ DLK G I TPL P TF
Sbjct: 121 SRIPTVVVGNPTEDSFRRDITINTLFYNIMTDEIEDFTKMGLNDLKLGIIRTPLDPLKTF 180
Query: 245 LDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+DDPLR+LR RF + F + +E+ A + E+K L K+S ER+G EI ++S
Sbjct: 181 IDDPLRILRVFRFSCAYGFEITKEIFAALENKEIKHCLKDKVSNERIGIEIKKIISTKNA 240
Query: 305 VKAMTHICGLTLFWIVFKL--PLQVEPE 330
K H LF VFK P PE
Sbjct: 241 CKVFRHFIVYDLFESVFKYKKPENYTPE 268
>gi|408389929|gb|EKJ69348.1| hypothetical protein FPSE_10461 [Fusarium pseudograminearum CS3096]
Length = 557
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/269 (45%), Positives = 164/269 (60%), Gaps = 15/269 (5%)
Query: 70 IELTDTETKIFSCLLNTLRHFN------LETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
I+LT E ++ LL+ R + VLR AGGWVRDKLL +DID+A++ M
Sbjct: 42 IQLTPKEEQLRRLLLDVARSIDDSRQASEPIVLRWAGGWVRDKLLNIQSHDIDVAINAMT 101
Query: 124 GSEFATKVAEYLS-----ATGETAPSGFGV---IPSNPDQSKHLETATMKLYDLWIDFVN 175
G FA + +Y A P+ G + NP++SKHLETA +K++ L +DFVN
Sbjct: 102 GVPFAQAMCDYCEQPDAMAKHSIGPADIGSLHNVARNPEKSKHLETAMVKIFGLDLDFVN 161
Query: 176 LRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIV 235
LR E Y+E+SR P M FGTAEEDA RRD T+N+LFYN++ VED TG G+AD+ +
Sbjct: 162 LRKETYTEDSRNPQMEFGTAEEDARRRDATVNALFYNLHDDRVEDFTG-GLADMDAKIMR 220
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
TPL P TF+DDPLRVLR +RF +R F ++ E +K A +V AL KISRERVG E
Sbjct: 221 TPLEPFQTFMDDPLRVLRLVRFASRLQFEIEPETRKFMADPKVLEALRVKISRERVGVEY 280
Query: 296 DLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
+ M+ G P +++ I L LF +F P
Sbjct: 281 EKMLKGAHPHESLELIDELQLFHAIFTDP 309
>gi|358389110|gb|EHK26703.1| hypothetical protein TRIVIDRAFT_83529 [Trichoderma virens Gv29-8]
Length = 504
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 152/236 (64%), Gaps = 15/236 (6%)
Query: 70 IELTDTETKIFSCLLN------TLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
++LT E ++ L+N T + VLR AGGWVRD+LLG++ +DID+A++ M
Sbjct: 7 VQLTQREQQLRLLLINVAKFIDTTAKLDQPLVLRWAGGWVRDRLLGRESHDIDVAINAMT 66
Query: 124 GSEFATKVAEYLSATGETAPSGFGV--------IPSNPDQSKHLETATMKLYDLWIDFVN 175
G +FA ++EY GF I SNPD+SKHLETA +KL+ + +DFVN
Sbjct: 67 GQQFAQHLSEYCKQPDAAQTHGFAPGDIGRLHHIASNPDKSKHLETAMVKLFGMDLDFVN 126
Query: 176 LRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIV 235
LR E Y+E+SR P M FGTAEEDA RRD TIN+LFYN++T +ED TG GI D++ I
Sbjct: 127 LRKETYAEDSRNPQMEFGTAEEDALRRDATINALFYNLHTEQIEDFTG-GIRDMEAKTIR 185
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERV 291
TPL P TF+DDPLRVLR IRF AR F +D E +K + D V AL KISRER+
Sbjct: 186 TPLEPFQTFMDDPLRVLRLIRFAARLGFTIDVESEKFMSDDRVLEALRKKISRERL 241
>gi|453081583|gb|EMF09632.1| poly A polymerase C-terminal region-like protein [Mycosphaerella
populorum SO2202]
Length = 921
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 132/332 (39%), Positives = 182/332 (54%), Gaps = 37/332 (11%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPS--- 151
VLR GGWVRDKLLGK +DID+A++ M G +F ++ EYL G A G I S
Sbjct: 69 VLRFTGGWVRDKLLGKKSHDIDVAINKMTGYQFGLRLKEYLEIPGNLAKYGLESIASSDK 128
Query: 152 ----------------------NPDQSKHLETATMKLYDLWIDFVNLRCEDYS-ENSRIP 188
NP++SKHLET TM++ L ID VNLR E YS E RIP
Sbjct: 129 QNQKAGKTDRSKSVGGLHKIEANPEKSKHLETTTMQILGLDIDLVNLRKETYSDEEGRIP 188
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
+ FGT EEDA RRD T+N++FYN+N +ED TG+G D++ I TPL P TF DDP
Sbjct: 189 QIEFGTPEEDAERRDATVNAMFYNLNEDIIEDFTGKGHDDMRAKIIRTPLAPYQTFKDDP 248
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LRVLR IRF +R + ++ +A ++ E+K AL KISRERVGTE++ + G P +A+
Sbjct: 249 LRVLRLIRFASRLGYTIESSALEAMSNAEIKDALRVKISRERVGTELEKALQGPDPHEAL 308
Query: 309 THICGLTLFWIVFKLPLQVE-----PEVLEGCEMFCTAY-LDAAWDLTQLIGSSTFNDDQ 362
I L L+ ++ P + E P+ E + T + A D+ Q + + +D
Sbjct: 309 RLIFSLDLYETIYSDPAKAESDHYRPQCEEWKVLIDTLQDIIANGDVLQSELARSQDDGH 368
Query: 363 RR---LSQYAALFLPFRNTTYKDNK--GKKIP 389
R ++ A +P+R+ + GKK P
Sbjct: 369 REEEVMAWQLAALVPYRDAPLPEPSAPGKKAP 400
>gi|392576327|gb|EIW69458.1| hypothetical protein TREMEDRAFT_68702 [Tremella mesenterica DSM
1558]
Length = 490
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/331 (41%), Positives = 184/331 (55%), Gaps = 18/331 (5%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I LT TE L + H R+AGGWVRDKLL D+DIAL G FA
Sbjct: 7 ISLTSTEAHFCELLDDFSTHRVPPVECRIAGGWVRDKLLALPSSDLDIALTISSGYTFAI 66
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
+ A YL++ G A G + +NP+QSKHLET T ++ + DFV LR E YS+ SRIP
Sbjct: 67 EFASYLTSHG-VAIGSVGRVAANPEQSKHLETGTTRILGMECDFVGLRNETYSD-SRIPQ 124
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
+ GT +DA+RRDLTIN+LFYN+++ VED TG G+ DL TPLPP TF DDPL
Sbjct: 125 IEPGTPTQDAFRRDLTINALFYNVHSRKVEDFTGEGLPDLASRIARTPLPPLQTFRDDPL 184
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
RVLR IRF +RF +D+++ +A + EVKA L +K+S+ERVG E+ M+ + P++A+
Sbjct: 185 RVLRCIRFASRFSLAIDDQVTEAMQNPEVKAELQSKVSKERVGIEVTKMLK-HDPLRAIE 243
Query: 310 HICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYA 369
I L L +F V E +A Q++ + L A
Sbjct: 244 LIHQLDLHQTIF-----VSTTSTERGNSLKSA---------QILAEVRNHLPVDELLWLA 289
Query: 370 ALFLPFRNTTYKDNKGKKIPVVNYTFRDSLK 400
A PFR+ T + K K++PVV+ D LK
Sbjct: 290 AACSPFRDLTMQ-VKNKEVPVVSGVLSDGLK 319
>gi|396081135|gb|AFN82754.1| tRNA nucleotidyltransferase/poly(A) polymerase [Encephalitozoon
romaleae SJ-2008]
Length = 464
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 186/318 (58%), Gaps = 14/318 (4%)
Query: 68 DKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEF 127
++I T+ E IF ++ + F + V RVAGGWVRDK++G +D+DIAL+N+ G +F
Sbjct: 3 NQINCTEAEEDIFDLIIRHAKEFG-DVVPRVAGGWVRDKIMGNPSFDMDIALENISGYKF 61
Query: 128 ATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRI 187
A + + SATG+ + VI NPD+SKHLETA +++ +DFVNLR E YSE +RI
Sbjct: 62 AAGLVK--SATGQKL-TEVHVIKDNPDKSKHLETAVVRINGFCVDFVNLRNETYSE-TRI 117
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDD 247
P + GT +EDA+RRDLTINSLFYN+ T +ED TGRGI D+K + TPL P+ T DD
Sbjct: 118 PNINPGTPQEDAFRRDLTINSLFYNLFTRRIEDYTGRGIDDIKGKILRTPLDPRTTLFDD 177
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
PLR++R RF ++F F +DE++ +A + +K AL K+S ER+ EI ++ +
Sbjct: 178 PLRLVRIFRFHSKFGFKIDEKIDEALLDERIKTALGKKVSNERIHIEIFKILHYPRGQYG 237
Query: 308 MTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQ 367
+ I +FK P+Q E +G +FC + +T L G +R +
Sbjct: 238 LLEIIRRGYVNPIFKPPVQRETSYEKGI-VFC----EIIEKITNLWGRPY----RREVLN 288
Query: 368 YAALFLPFRNTTYKDNKG 385
+ FR +T KG
Sbjct: 289 LYTVLCFFRGSTIPSQKG 306
>gi|82753230|ref|XP_727593.1| tRNA nucleotidyltransferase mitochondrial precursor [Plasmodium
yoelii yoelii 17XNL]
gi|23483513|gb|EAA19158.1| tRNA nucleotidyltransferase, mitochondrial precursor [Plasmodium
yoelii yoelii]
Length = 772
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 153/264 (57%), Gaps = 21/264 (7%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
+T E ++F L+ + L T LRV GGWVRDK L DID+ +DNM GS+F +
Sbjct: 182 ITHRELELFEFLIKINETYKLNTTLRVVGGWVRDKFLNISNDDIDVTVDNMKGSDFCNYI 241
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
EY+ E FG+I N DQSKHLET++ L++ +D VNLR E Y+E SRIP +
Sbjct: 242 KEYI-KDKENKNFNFGIIKINCDQSKHLETSSFNLFNFQVDIVNLRNEKYTEESRIPEIS 300
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
GT EEDA RRD TINSLFYN+ +ED T GI L++ I TPL P TFLDDPLR+
Sbjct: 301 IGTVEEDALRRDFTINSLFYNLKNKKIEDYTKNGIFHLRNXIISTPLNPLTTFLDDPLRI 360
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
+R IRF FDF L++ + ++++K + KIS+ R+ +EI +K +H
Sbjct: 361 IRCIRFCGYFDFNLNKSIFDVLKNEDIKKSFNKKISKSRLASEI---------IKIFSHK 411
Query: 312 C-----GLTLFWI------VFKLP 324
C LTL +FKLP
Sbjct: 412 CKNIVLSLTLLNYSNYSKEIFKLP 435
>gi|149249021|ref|XP_001528850.1| hypothetical protein LELG_05760 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453323|gb|EDK47579.1| hypothetical protein LELG_05760 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 535
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 148/436 (33%), Positives = 216/436 (49%), Gaps = 47/436 (10%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLET----VLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
I L D+E KI + L+ ++ + LR+ GGWVRDKLL + DIDIA+D+++G
Sbjct: 23 ILLNDSEQKIRNLLVGYCDYYRNQGGKPLTLRITGGWVRDKLLCNESQDIDIAIDHLLGV 82
Query: 126 EFATKVAEYL-SATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSEN 184
+F + YL E + I NP +SKHLET T KLYD+ +DFVNLR E+Y+E
Sbjct: 83 DFVNGLQNYLIEQDPEMSMRHVHTIKMNPLKSKHLETCTTKLYDIDLDFVNLRSEEYTEE 142
Query: 185 SRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATF 244
SR+P + FGT +EDA RRD T+N+LFYN+N +ED TG+G+ DL+ G + TPL P TF
Sbjct: 143 SRVPVIEFGTPKEDAMRRDATLNALFYNLNEQKIEDFTGKGLQDLQDGVLRTPLSPVKTF 202
Query: 245 LDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
LDDPLR+LR IRF +FDF ++++ +A + AL+ KIS+ER+ E+ + P
Sbjct: 203 LDDPLRILRLIRFACKFDFKIEKKTLEAMMELHNQKALSTKISKERIEIELRKALVSKNP 262
Query: 305 ------------VKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLT-- 350
VK++ ++ GL K ++ P L + T
Sbjct: 263 SYGLRLIYHCNLVKSIFYVDGLGFDETAMKHSVKRIPHHLLAASAIYPYFEQQIHKSTIH 322
Query: 351 QLIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVM 410
L F+DD + + + P+ NK V + R LK K SD +
Sbjct: 323 MLRALEIFDDDSKFNFWLSMILHPYSTVPRVKNKD----VYDQFLRVGLKCKKSDINKIS 378
Query: 411 NIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVA 470
I +LVS + + ++ P + K R G LRE F +
Sbjct: 379 AI------------NLVSRTTI--------DQFLEAPQSVK-RSDLGLYLREFPDFASLN 417
Query: 471 LLISTL---LYPTHVD 483
LL+ ++ HVD
Sbjct: 418 LLVQCFIDCIHNVHVD 433
>gi|363753810|ref|XP_003647121.1| hypothetical protein Ecym_5566 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890757|gb|AET40304.1| hypothetical protein Ecym_5566 [Eremothecium cymbalariae
DBVPG#7215]
Length = 503
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 192/386 (49%), Gaps = 31/386 (8%)
Query: 97 RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
R+AGGWVRDKLLG D DID+ ++N+ G +F + + E+L I NP++S
Sbjct: 43 RIAGGWVRDKLLGLDSEDIDVVVNNISGEQFVSGLVEFLRGRDVGKVGSVHKINRNPEKS 102
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
KHLET T L+ + +DFVNLR E Y+E+SRIP + FGT +DA RRD T+N+LFYNI
Sbjct: 103 KHLETCTTHLFGVPVDFVNLRSERYTEDSRIPVVEFGTPLQDAMRRDATLNALFYNIIEE 162
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
VED TG G+ DL G + TP+ P+ TF DDPLR+LR +RF +RF F+LD E +A +
Sbjct: 163 KVEDFTGSGLKDLSEGVLRTPILPQQTFKDDPLRILRLLRFASRFSFVLDPEALEAMKQE 222
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGC- 335
++ L K+SRERVG E+ ++ P+ + + L VF L+ C
Sbjct: 223 DIHRMLETKVSRERVGVEVHKILISKSPLCGIKLMLDAGLMRHVFSYMGGASSTALDNCY 282
Query: 336 -EMFCTAYLDAAWDLTQLIG-----SSTFNDDQRRLSQYAALFL-PFRNTTYKDNKGKKI 388
M Y +LT +I + + D R +L L PF + K
Sbjct: 283 KRMISGGY-KLVGNLTHVIAGYPLLGTWYEDCNFREHMLLSLILAPFNELYASKHSRKGS 341
Query: 389 PVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPD 448
+ +DSL+ E V I + SL + +N W + V
Sbjct: 342 SALGRIIKDSLRYPKLSVELVELI----------VGSLNEYHECVINHASWPRSRV---- 387
Query: 449 ASKLRVLTGFLLREIKKFWRVALLIS 474
G ++R++K W + ++
Sbjct: 388 --------GEVIRKLKGHWELCHCVT 405
>gi|149248981|ref|XP_001528831.1| hypothetical protein LELG_05772 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453335|gb|EDK47591.1| hypothetical protein LELG_05772 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 565
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 147/434 (33%), Positives = 214/434 (49%), Gaps = 44/434 (10%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLET----VLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
I L D+E KI + L+ ++ + LR+ GGWVRDKLL + DIDIA+D+++G
Sbjct: 53 ILLNDSEQKIRNLLVGYCDYYRNQGGKPLTLRITGGWVRDKLLCNESQDIDIAIDHLLGV 112
Query: 126 EFATKVAEYL-SATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSEN 184
+F + YL E + I NP +SKHLET T KLYD+ +DFVNLR E+Y+E
Sbjct: 113 DFVNGLQNYLIEQDPEMSMRHVHTIKMNPLKSKHLETCTTKLYDIDLDFVNLRSEEYTEE 172
Query: 185 SRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATF 244
SR+P + FGT +EDA RRD T+N+LFYN+N +ED TG+G+ DL+ G + TPL P TF
Sbjct: 173 SRVPVIEFGTPKEDAMRRDATLNALFYNLNEQKIEDFTGKGLQDLQDGVLRTPLSPVKTF 232
Query: 245 LDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
LDDPLR+LR IRF +FDF ++++ +A + AL+ KIS+ER+ E+ + P
Sbjct: 233 LDDPLRILRLIRFACKFDFKIEKKTLEAMMELHNQKALSTKISKERIEIELRKALVSKNP 292
Query: 305 ------------VKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLT-- 350
VK++ ++ GL K ++ P L + T
Sbjct: 293 SYGLRLIYHCNLVKSIFYVDGLGFDETAMKHSVKRIPHHLLAASAIYPYFEQQIHKSTIH 352
Query: 351 QLIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVM 410
L F+DD + + + P+ NK V + R LK K SD +
Sbjct: 353 MLRALEIFDDDSKFNFWLSMILHPYSTVPRVKNKD----VYDQFLRVGLKCKKSDINKIS 408
Query: 411 NIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVA 470
I +LVS + + ++ P + K R G LRE F +
Sbjct: 409 AI------------NLVSRTTI--------DQFLEAPQSVK-RSDLGLYLREFPDFASLN 447
Query: 471 LLISTLLYPTHVDH 484
LL+ + H H
Sbjct: 448 LLVQCFIDCIHNVH 461
>gi|19075619|ref|NP_588119.1| ATP(CTP) tRNA nucleotidyltransferase (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74665823|sp|Q9Y7U9.1|CCA2_SCHPO RecName: Full=Putative CCA tRNA nucleotidyltransferase 2; AltName:
Full=CCA-adding enzyme 2; AltName: Full=tRNA
CCA-pyrophosphorylase 2; AltName: Full=tRNA
adenylyltransferase 2; AltName: Full=tRNA
nucleotidyltransferase 2
gi|4539282|emb|CAB39906.1| ATP(CTP) tRNA nucleotidyltransferase (predicted)
[Schizosaccharomyces pombe]
Length = 484
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 213/419 (50%), Gaps = 37/419 (8%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETV------LRVAGGWVRDKLLGKDCYDIDIALDNM 122
+I L D E K+ + L T ++ +R+AGGWVRDKLLG D+D+ L+ +
Sbjct: 4 RIVLNDVEKKVVNLLKKTADFIESKSSSSSSLEVRLAGGWVRDKLLGLSSDDLDVTLNKV 63
Query: 123 MGSEFATKVAEYLSATGETA----PSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
G +FA + EY+ + + G + NPDQSKHLETAT+ L+DL IDFV LR
Sbjct: 64 TGVDFANSIFEYVHSLDSDSVIPYKDALGKLTVNPDQSKHLETATLSLFDLDIDFVGLRA 123
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
E Y + SRIP++ GT E DA RRD T+N+LF+NI T +ED+T RG DL+ +VTP+
Sbjct: 124 ESYDDKSRIPSVTPGTVETDALRRDFTVNTLFFNIRTEKIEDITKRGYKDLQTKVLVTPI 183
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P +FL+DPLR+LR IRF +RF+F +D + A +V A K+S+ERVG EI+ M
Sbjct: 184 SPLQSFLEDPLRILRGIRFASRFEFTIDPSVVSAIQDPKVCKAFEKKVSKERVGEEIEKM 243
Query: 299 VSGNQPVKAMTHICGLTLFWIVFK-LPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSST 357
+ G A+ + + F LP + E ++ + E + + A +L+ S
Sbjct: 244 LKGANAKLALQLLYSTNTYQFTFDTLPAEKEFQIPKALEATESLFQSLALTFPKLMKLS- 302
Query: 358 FNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLE 417
D++ L Y AL T K IP + +D LK ++ T +N
Sbjct: 303 -EDEKIGLWLYVALIPWSSQTVMVKKKQFYIPAI--IAKDKLKLRS----TYVNQLNQCC 355
Query: 418 KFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLISTL 476
F + LV+ K + S + G L+R++ K W V L S +
Sbjct: 356 TFNPIFDELVNDTSTK--------------NCSSI----GSLIRQLNKSWEVVFLTSVI 396
>gi|398392067|ref|XP_003849493.1| hypothetical protein MYCGRDRAFT_110849 [Zymoseptoria tritici
IPO323]
gi|339469370|gb|EGP84469.1| hypothetical protein MYCGRDRAFT_110849 [Zymoseptoria tritici
IPO323]
Length = 630
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 176/317 (55%), Gaps = 31/317 (9%)
Query: 91 NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP------- 143
N + VLR GGWVRDKLLG +DID+A++ M G +F ++ +YL G
Sbjct: 127 NEKIVLRYTGGWVRDKLLGVPSHDIDVAINKMTGFQFGLRMKQYLEIPGNLEKYGLESLA 186
Query: 144 ------------------SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENS 185
G I +NP++SKHLET TM++ L ID VNLR E Y+++S
Sbjct: 187 ANDKQSLKAGTTDKSKTVGGLHKIEANPEKSKHLETTTMRILGLDIDLVNLRKETYTDDS 246
Query: 186 RIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFL 245
R P M FGT EEDA RRD T+N++FYN+NT ED T RG D+ I TPL P TF
Sbjct: 247 RNPEMEFGTPEEDALRRDATVNAMFYNLNTKETEDFTRRGHKDMARKVICTPLEPYQTFK 306
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
DDPLRVLR IRF +R + ++ E+ +AA + ++K AL KISRERVG E++ ++G P
Sbjct: 307 DDPLRVLRLIRFASRLGYTIEAEVLEAARNPDIKEALRRKISRERVGVELEKALTGPDPH 366
Query: 306 KAMTHICGLTLFWIVFKLPL-----QVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFND 360
+A+ + L L+ +F P P+V +G ++ A D + + + +
Sbjct: 367 EALRLVFDLDLYETIFSDPAVADVDHYSPDV-DGWQIVIDALSDVLNNGGTIADNLARDK 425
Query: 361 DQRRLSQYAALFLPFRN 377
+++ + A +P+R+
Sbjct: 426 EEQYFAWQLAAMVPYRD 442
>gi|328853364|gb|EGG02503.1| hypothetical protein MELLADRAFT_28635 [Melampsora larici-populina
98AG31]
Length = 206
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 144/201 (71%), Gaps = 4/201 (1%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG---ETAPSGFGVIPSN 152
+R+AGGWVRDKLLG + D+D+A+ ++ G++FA + ++S + + S +I +
Sbjct: 5 IRIAGGWVRDKLLGVESNDLDLAISSLTGTQFAQHFSNFISIHSNQKDLSLSKIAIIEAR 64
Query: 153 PDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFY 211
PDQSKHLETAT K +L +DFV LR E Y +SRIP+ +RFGT +EDA RRD+TIN+LFY
Sbjct: 65 PDQSKHLETATSKFLNLELDFVQLRNESYHSDSRIPSDIRFGTPKEDAMRRDITINALFY 124
Query: 212 NINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
NI+ +ED T G+ DLK+G I TPLP TF DDPLR+LR IRF +RF F LD+++ +
Sbjct: 125 NIHNDQIEDQTELGLEDLKNGLIRTPLPALETFQDDPLRLLRCIRFSSRFGFRLDDQIIQ 184
Query: 272 AAASDEVKAALAAKISRERVG 292
AA SD++ AL KISRER+G
Sbjct: 185 AAQSDQITMALQEKISRERIG 205
>gi|429965609|gb|ELA47606.1| hypothetical protein VCUG_00929 [Vavraia culicis 'floridensis']
Length = 669
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/254 (45%), Positives = 161/254 (63%), Gaps = 7/254 (2%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
+I+L TE KI + + T H V RVAGGWVRDKLLGK DIDI ++ + G FA
Sbjct: 30 EIKLAPTEEKIIT-KIKTYAHTLQGIVPRVAGGWVRDKLLGKVSNDIDITINRISGYAFA 88
Query: 129 TKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
+ EY TG G I +NPD+SKHLETA M++ +++DF++LR E+Y ++RIP
Sbjct: 89 HGMQEYYGITG-----SIGQIKANPDKSKHLETAVMRIEGVFVDFLSLRTEEYF-DTRIP 142
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
++ +A+EDA+RRDLTIN+LFYNI +ED TGRG++DL+HG I TP+ P T +DDP
Sbjct: 143 VVKSCSAQEDAFRRDLTINALFYNIMEQCIEDFTGRGLSDLEHGVIRTPMDPLKTLIDDP 202
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LR+LR IRF RF F + + L A ++ V+ L KIS ER+G E+ ++ + A
Sbjct: 203 LRILRIIRFSVRFKFKIADGLFVAFQNEHVRTNLHKKISNERIGQEMYKILGYEHFIHAF 262
Query: 309 THICGLTLFWIVFK 322
+ G L +FK
Sbjct: 263 RVMVGCALVPAIFK 276
>gi|302497111|ref|XP_003010556.1| hypothetical protein ARB_03257 [Arthroderma benhamiae CBS 112371]
gi|291174099|gb|EFE29916.1| hypothetical protein ARB_03257 [Arthroderma benhamiae CBS 112371]
Length = 605
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 173/296 (58%), Gaps = 24/296 (8%)
Query: 49 CKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLET---------VLRVA 99
K+ +SE R V+V +++L+ E + + LL+T+ + + VLR
Sbjct: 64 VKSGVSESTMTRGGGVKV-PQVQLSSEEALLRTLLLDTVEYIRRKNNDDPKGSGLVLRFT 122
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG--------------ETAPSG 145
GGWVRDK+LG D DID+ + M G EF + EYL + G
Sbjct: 123 GGWVRDKVLGVDSQDIDVGISTMTGYEFGLALKEYLDIPENLERYKAHYPEHALKGVIGG 182
Query: 146 FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLT 205
I +NP++SKHLET T++++ +D VNLR E Y++ SR P + FGTAEEDA RRD T
Sbjct: 183 LHKIAANPEKSKHLETTTIRVFGFDVDLVNLRKETYTDTSRNPQVEFGTAEEDALRRDAT 242
Query: 206 INSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFIL 265
+N+LFYN++T VED TG G++D++ I TPL P TF DDPLRVLR IRF +R + +
Sbjct: 243 VNALFYNLHTGEVEDFTGMGLSDMEAKLIRTPLAPYQTFKDDPLRVLRLIRFASRLGYTI 302
Query: 266 DEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
D +++ D++K +L KIS+ER+G EI+ M+ G P+ A+ I L L+ +F
Sbjct: 303 DPNTEESMCDDDIKHSLRLKISQERIGIEIEKMLRGPDPLGALMIINRLGLYDTIF 358
>gi|156098615|ref|XP_001615323.1| tRNA nucleotidyltransferase [Plasmodium vivax Sal-1]
gi|148804197|gb|EDL45596.1| tRNA nucleotidyltransferase, putative [Plasmodium vivax]
Length = 689
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/244 (45%), Positives = 151/244 (61%), Gaps = 3/244 (1%)
Query: 54 SEQEPPRPVVVQVRDKIELT--DTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKD 111
+ PP +Q+ + I T E ++F+ L + L+ LRV GGWVRDK LG
Sbjct: 30 QQGHPPPDGALQIEELITKTMRKEEEELFAFLQKVNETYKLQCTLRVVGGWVRDKFLGIS 89
Query: 112 CYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWI 171
DID+ +DNM GSEF + EY+ E FG+I N DQSKHLET++ L++ +
Sbjct: 90 NDDIDLTVDNMKGSEFCNYIKEYIQEK-EKKNFNFGIIKINSDQSKHLETSSFNLFNFQV 148
Query: 172 DFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKH 231
D VNLR E Y+E+SRIP + GT EEDA RRD T+N+LFYN+N VED T RGI LK+
Sbjct: 149 DVVNLRNEKYTEDSRIPEIIIGTPEEDALRRDFTVNALFYNLNNRRVEDYTRRGILHLKN 208
Query: 232 GKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERV 291
I TPL P +TFLDDPLR++R IRF F+F L++ + ++++ A KISR R+
Sbjct: 209 KIICTPLDPLSTFLDDPLRIIRCIRFCGVFNFFLEKSIFDVLKNEQILKAFKKKISRSRL 268
Query: 292 GTEI 295
+EI
Sbjct: 269 SSEI 272
>gi|315042315|ref|XP_003170534.1| tRNA nucleotidyltransferase [Arthroderma gypseum CBS 118893]
gi|311345568|gb|EFR04771.1| tRNA nucleotidyltransferase [Arthroderma gypseum CBS 118893]
Length = 604
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 165/276 (59%), Gaps = 23/276 (8%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLET---------VLRVAGGWVRDKLLGKDCYDIDIAL 119
+++L+ E + + LL+T+ + L+ VLR GGWVRDK+LG DID+ +
Sbjct: 83 RVQLSSEEALLRTLLLDTVEYVRLKNNDDPKVSDLVLRFTGGWVRDKVLGVGSQDIDVGI 142
Query: 120 DNMMGSEFATKVAEYLSATGETAP--------------SGFGVIPSNPDQSKHLETATMK 165
M G +F + EYL + G I +NP +SKHLET T++
Sbjct: 143 STMTGYDFGLALKEYLDIPEKLEKYKAHYPEHALKGVIGGLHKIAANPQKSKHLETTTIR 202
Query: 166 LYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRG 225
++ +D VNLR E Y++ SR P + FGTAEEDA+RRD TIN+LFYNI+T VED TGRG
Sbjct: 203 VFGFDVDLVNLRKETYTDTSRNPQVEFGTAEEDAFRRDATINALFYNIHTGEVEDFTGRG 262
Query: 226 IADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAK 285
++D+ I TP+ P TF DDPLRVLR IRF +R + +D +++ +D++K +L K
Sbjct: 263 LSDMGDKLIRTPMEPYQTFKDDPLRVLRLIRFASRLGYTIDPNTEESMYNDDIKHSLRLK 322
Query: 286 ISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
IS+ER+G EI+ M+ G P+ ++ I L L+ +F
Sbjct: 323 ISQERIGIEIEKMLRGPDPLGSLEIINRLGLYDTIF 358
>gi|224000135|ref|XP_002289740.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974948|gb|EED93277.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 218
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 154/219 (70%), Gaps = 19/219 (8%)
Query: 92 LETVLRVAGGWVRDKLL-----------------GKDCYDIDIALDNMMGSEFATKVAEY 134
+++ LRVAGGWVRDK+L G+ DIDIALD+ +G EFA ++ ++
Sbjct: 1 MKSTLRVAGGWVRDKILASKEFKQHIKGVDLYYEGRGSIDIDIALDDKLGREFADELNQW 60
Query: 135 LSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRFG 193
LS G S GV+ NP++SKHLETATM++ + WIDFVNLR E+Y+ +SRIP MR G
Sbjct: 61 LSDHGRETHS-VGVVLKNPEKSKHLETATMRINNYWIDFVNLRAEEYTSDSRIPDLMRIG 119
Query: 194 TAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
TAEEDA+RRDLTINSLFYNIN VED+TGRG+ DLK G + TPLPP T LDDPLRVLR
Sbjct: 120 TAEEDAFRRDLTINSLFYNINDGVVEDMTGRGMDDLKRGIVATPLPPLTTLLDDPLRVLR 179
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVG 292
++RF AR F + E L+ AAA VK AL K+SRERVG
Sbjct: 180 SVRFAARLRFGMAESLRDAAADSRVKLALEQKVSRERVG 218
>gi|346977339|gb|EGY20791.1| tRNA nucleotidyltransferase [Verticillium dahliae VdLs.17]
Length = 529
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/267 (44%), Positives = 169/267 (63%), Gaps = 15/267 (5%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLET------VLRVAGGWVRDKLLGKDCYDIDIALDNM 122
+++LT+ E ++ L++ + N+ VLR AGGWVRDKLLG +DID+A++ M
Sbjct: 9 QLQLTERERQLRDLLVDVSKFININDQLPEPLVLRWAGGWVRDKLLGTTSHDIDVAINVM 68
Query: 123 MGSEFATKVAEY-----LSATGETAPSGFG---VIPSNPDQSKHLETATMKLYDLWIDFV 174
G F ++ EY L++ P G I +NP++SK+LET T+K++ L +DFV
Sbjct: 69 TGLRFGERLREYCDVPELASRHGIEPDDIGNLHRIAANPEKSKNLETTTVKVFGLDLDFV 128
Query: 175 NLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKI 234
NLR E Y+E+SR PT+ FGTAEEDA RRD T+N+LF+N++T VED TG G+ D++ I
Sbjct: 129 NLRTETYAEDSRNPTVDFGTAEEDALRRDATVNALFFNLHTEKVEDFTG-GLGDMRDRLI 187
Query: 235 VTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTE 294
TPL P TF+DDPLRVLR +RF +R F +D + A V AAL KISRERVG E
Sbjct: 188 RTPLEPLQTFMDDPLRVLRLVRFASRLGFAIDPAARDVMADPNVLAALRIKISRERVGVE 247
Query: 295 IDLMVSGNQPVKAMTHICGLTLFWIVF 321
++ M+ + P +A+ I L L ++
Sbjct: 248 LEKMMKDHDPHRALQLIDELGLHHAIY 274
>gi|327300072|ref|XP_003234729.1| tRNA nucleotidyltransferase [Trichophyton rubrum CBS 118892]
gi|326463623|gb|EGD89076.1| tRNA nucleotidyltransferase [Trichophyton rubrum CBS 118892]
Length = 559
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 173/296 (58%), Gaps = 24/296 (8%)
Query: 49 CKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLET---------VLRVA 99
K+ +SE R V+V +++L+ E + + LL+T+ + + VLR
Sbjct: 18 VKSGVSESTMTRGGGVKV-PQVQLSSEEAILRTLLLDTVEYIRRKNNDDPKGSGLVLRFT 76
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG--------------ETAPSG 145
GGWVRDK+LG D DID+ + M G EF + EYL + G
Sbjct: 77 GGWVRDKVLGVDSQDIDVGISTMTGYEFGLALKEYLDIPENLERYKAHYPEHALKGVIGG 136
Query: 146 FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLT 205
I +NP++SKHLET T++++ +D VNLR E Y++ SR P + FGTAEEDA RRD T
Sbjct: 137 LHKIAANPEKSKHLETTTIRVFGFDVDLVNLRKETYTDTSRNPQVEFGTAEEDALRRDAT 196
Query: 206 INSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFIL 265
+N+LFYN++T VED TG G++D++ I TPL P TF DDPLRVLR IRF +R + +
Sbjct: 197 VNALFYNLHTGEVEDFTGMGLSDMEAKLIRTPLAPYQTFKDDPLRVLRLIRFASRLGYTI 256
Query: 266 DEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
D +++ D++K +L KIS+ER+G EI+ M+ G P+ A+ I L L+ +F
Sbjct: 257 DPNTEESMCDDDIKHSLRLKISQERIGIEIEKMLRGPDPLGALMIINRLGLYDTIF 312
>gi|388857460|emb|CCF48968.1| related to tRNA nucleotidyltransferase [Ustilago hordei]
Length = 716
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/273 (45%), Positives = 158/273 (57%), Gaps = 48/273 (17%)
Query: 97 RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS----ATGETAPSGF------ 146
R+AGGWVRDKLL +D D+DI L + G+ FA + YLS A A S F
Sbjct: 53 RIAGGWVRDKLLSRDSDDLDITLSTLTGNAFALHLKHYLSTPSFAASPLAQSPFFQDEGS 112
Query: 147 -----GVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYR 201
G I +NP+QSK+LETAT +L L +DFVNLR E Y SRIPTM FGT +EDA R
Sbjct: 113 EMGRIGKIAANPEQSKNLETATARLLGLSLDFVNLRKETYDLGSRIPTMTFGTPKEDAER 172
Query: 202 RDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF 261
RD+TINSL YN++T VED TG G+ DL G I TPLPP TFLDDPLRVLR +RF +RF
Sbjct: 173 RDITINSLLYNVHTRQVEDHTGLGLQDLASGLIRTPLPPLTTFLDDPLRVLRCVRFSSRF 232
Query: 262 DFIL-----------------DEELKKAAASDE----------------VKAALAAKISR 288
+ L + L + A+SD+ ++ AL K+SR
Sbjct: 233 AYELHPTIIRCLTGAGAQQEGESSLTQLASSDDPRVSQAGQGVEHGRDLIREALINKVSR 292
Query: 289 ERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
ER+G E+D M+ G P+ A+ + L LF +VF
Sbjct: 293 ERIGIEVDKMIKGPHPLLALFELHRLELFPLVF 325
>gi|326473531|gb|EGD97540.1| tRNA nucleotidyltransferase [Trichophyton tonsurans CBS 112818]
Length = 605
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 165/276 (59%), Gaps = 23/276 (8%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLET---------VLRVAGGWVRDKLLGKDCYDIDIAL 119
+++L+ E + + LL+T+ + + VLR GGWVRDK+LG D DID+ +
Sbjct: 83 QVQLSSEEALLRTLLLDTVEYIRRKDNDDPKEPGLVLRFTGGWVRDKVLGVDSQDIDVGI 142
Query: 120 DNMMGSEFATKVAEYLSATG--------------ETAPSGFGVIPSNPDQSKHLETATMK 165
M G +F + EYL + G I +NP++SKHLET T++
Sbjct: 143 STMTGYDFGLALKEYLDIPENLEKYKAHYPEHALKGVIGGLHKIAANPEKSKHLETTTIR 202
Query: 166 LYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRG 225
++ +D VNLR E Y++ SR P + FGTAEEDA RRD T+N+LFYN++T VED TG G
Sbjct: 203 VFGFDVDLVNLRKETYTDTSRNPQVEFGTAEEDALRRDATVNALFYNLHTGEVEDFTGTG 262
Query: 226 IADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAK 285
++D++ I TPL P TF DDPLRVLR IRF +R + +D +++ D++K +L K
Sbjct: 263 LSDMEAKLIRTPLAPYQTFKDDPLRVLRLIRFASRLGYTIDPNTEESMCDDDIKHSLRLK 322
Query: 286 ISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
IS+ER+G EI+ M+ G P+ A+T I L L+ +F
Sbjct: 323 ISQERIGIEIEKMLRGPDPLAALTIINRLGLYDTIF 358
>gi|389635255|ref|XP_003715280.1| poly(A) polymerase [Magnaporthe oryzae 70-15]
gi|351647613|gb|EHA55473.1| poly(A) polymerase [Magnaporthe oryzae 70-15]
Length = 546
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 148/238 (62%), Gaps = 9/238 (3%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFG------- 147
LR AGGWVRDKLLG + +DID+A+ M G F ++ + + G
Sbjct: 64 ALRWAGGWVRDKLLGTESHDIDVAISCMTGEAFTRELVAFCNDAANRDRHGISEGDIGNL 123
Query: 148 -VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTI 206
+ +NPD+SKHLET T +++ L +DFVNLR E Y+E+SR P M FGTAEEDA RRD T+
Sbjct: 124 HKVAANPDKSKHLETVTTRMFGLEVDFVNLRKETYTEDSRNPQMEFGTAEEDALRRDATV 183
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
N+LFYNI+TS VED G G+ D+ I TPL P TF DDPLRVLR +RF +R F +D
Sbjct: 184 NALFYNIHTSEVEDFVG-GLRDMDQKLIRTPLEPLQTFKDDPLRVLRLVRFASRLGFTID 242
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
+K ++ +V AL KISRERVG E++ M+ G P ++ I L L+ +F P
Sbjct: 243 PSAEKTMSAPDVLEALRLKISRERVGVEVEKMLKGKHPRDSLHLIDRLQLYQAIFTDP 300
>gi|326480246|gb|EGE04256.1| tRNA nucleotidyltransferase [Trichophyton equinum CBS 127.97]
Length = 533
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 165/276 (59%), Gaps = 23/276 (8%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLET---------VLRVAGGWVRDKLLGKDCYDIDIAL 119
+++L+ E + + LL+T+ + + VLR GGWVRDK+LG D DID+ +
Sbjct: 11 QVQLSSEEALLRTLLLDTVEYIRRKDNDDPKEPGLVLRFTGGWVRDKVLGVDSQDIDVGI 70
Query: 120 DNMMGSEFATKVAEYLSATG--------------ETAPSGFGVIPSNPDQSKHLETATMK 165
M G +F + EYL + G I +NP++SKHLET T++
Sbjct: 71 STMTGYDFGLALKEYLDIPENLEKYKAHYPEHALKGVIGGLHKIAANPEKSKHLETTTIR 130
Query: 166 LYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRG 225
++ +D VNLR E Y++ SR P + FGTAEEDA RRD T+N+LFYN++T VED TG G
Sbjct: 131 VFGFDVDLVNLRKETYTDTSRNPQVEFGTAEEDALRRDATVNALFYNLHTGEVEDFTGTG 190
Query: 226 IADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAK 285
++D++ I TPL P TF DDPLRVLR IRF +R + +D +++ D++K +L K
Sbjct: 191 LSDMEAKLIRTPLAPYQTFKDDPLRVLRLIRFASRLGYTIDPNTEESMCDDDIKHSLRLK 250
Query: 286 ISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
IS+ER+G EI+ M+ G P+ A+T I L L+ +F
Sbjct: 251 ISQERIGIEIEKMLRGPDPLAALTIINRLGLYDTIF 286
>gi|440791421|gb|ELR12659.1| tRNA nucleotidyltransferase/poly(A) polymerase family domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 594
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/258 (45%), Positives = 162/258 (62%), Gaps = 7/258 (2%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I ++D E +IF L++ ++ NL + LRVAGGWVRDK ++ D+DIAL+NMMG EFA
Sbjct: 24 IAVSDEERRIFEYLVDVVKASNLNSELRVAGGWVRDK---QEKVDLDIALNNMMGQEFAR 80
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
++ Y + S G++ NP +SKHLETA + ++ +D VNLR E Y SRIPT
Sbjct: 81 WISRY-NKHHNLPTSKIGIVRINPAKSKHLETAVVSIFGHSVDLVNLRTESYRPGSRIPT 139
Query: 190 -MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
+ G+ ++D+ RRD TIN+L+YNI +ED TG G+ADL+ G + TP P AT LDDP
Sbjct: 140 AVGLGSPKQDSSRRDFTINALYYNIREDRIEDYTGHGLADLEAGLLRTPDEPLATLLDDP 199
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM--VSGNQPVK 306
LRVLR +RF A F EL +A EV AL AK+SR+RVG E++ M + + +
Sbjct: 200 LRVLRGVRFKAMLAFRFVPELAEAMQRPEVHEALRAKVSRQRVGLELNKMLRLDTEKALD 259
Query: 307 AMTHICGLTLFWIVFKLP 324
A+ I L L ++F LP
Sbjct: 260 ALEQIAALDLHDVIFPLP 277
>gi|407035142|gb|EKE37550.1| tRNA nucleotidyltransferase, putative [Entamoeba nuttalli P19]
Length = 461
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 191/364 (52%), Gaps = 24/364 (6%)
Query: 86 TLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSG 145
T+ HF L T++RV GGWVRDKLLGK+ +DIDI +DNM +F+ + +Y++ + SG
Sbjct: 16 TVLHFKLSTIIRVVGGWVRDKLLGKESHDIDITVDNMQSYQFSQYLQKYINEHTQHNVSG 75
Query: 146 FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLT 205
GVI N KHLETAT+++ ++ ID LR DY +N + GT EDA RRD T
Sbjct: 76 IGVIHKNHSAGKHLETATLRIDNIAIDICRLRASDYCDNDE---EKIGTPLEDAQRRDFT 132
Query: 206 INSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFIL 265
IN++FY +N +EDLTG G+ DLK I TP+ PK T DDP R LRAIRF + F+L
Sbjct: 133 INAMFYRVNDDQIEDLTGCGLNDLKSRIIRTPISPKETLHDDPARALRAIRFSGKMGFVL 192
Query: 266 DEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF-KLP 324
DEEL++ + + + + +SRER+G E+ M+ ++P + I F +F L
Sbjct: 193 DEELEQEMKTKYIGDKMTSGLSRERLGRELIGMIQSDRPAYCIDQIRQFGYFKGLFGDLD 252
Query: 325 LQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNK 384
V+ EM+ + F +R + AAL + T + N+
Sbjct: 253 EITTTNVVRSYEMYAQKF-------------GAFELGRREIGFLAALLY---SVTRETNQ 296
Query: 385 GKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIP----SLVSAEDVKVNDGQWS 440
K++ ++ DSLK + ++ +H +++ L + V + V +W
Sbjct: 297 KKRMAKIHSVIIDSLKLSVKERNNIILVHNGVKELEQLSNKKEWTRVEVGRIVVASAEWW 356
Query: 441 KELV 444
KE +
Sbjct: 357 KESI 360
>gi|296816052|ref|XP_002848363.1| tRNA nucleotidyltransferase [Arthroderma otae CBS 113480]
gi|238841388|gb|EEQ31050.1| tRNA nucleotidyltransferase [Arthroderma otae CBS 113480]
Length = 603
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 165/276 (59%), Gaps = 23/276 (8%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNL---------ETVLRVAGGWVRDKLLGKDCYDIDIAL 119
++ L+ E + LL+T+ H L + VLR GGWVRDKLLG D DID+ +
Sbjct: 81 RVHLSSEEALLRRLLLDTVEHICLRQKNKVNGPDLVLRFTGGWVRDKLLGVDSQDIDVGI 140
Query: 120 DNMMGSEFATKVAEYLSATGETAP--------------SGFGVIPSNPDQSKHLETATMK 165
M G +F + EYL + G I +NP +SKHLET T++
Sbjct: 141 STMTGYDFGLALKEYLDIPEKLEKYKAHYPVHALKGIIGGLHKIAANPKKSKHLETTTIR 200
Query: 166 LYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRG 225
++ +D VNLR E Y+++SR P + FGTAEEDA RRD T+N+LFYN++T VED TGRG
Sbjct: 201 VFGFDVDLVNLRKETYTDDSRNPQVEFGTAEEDALRRDATVNALFYNLHTDEVEDFTGRG 260
Query: 226 IADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAK 285
++D++ I TPL P TF DDPLRVLR IRF +R + +D + + + +D++K +L K
Sbjct: 261 LSDMESKLIRTPLAPYQTFKDDPLRVLRLIRFASRLGYTIDPDTETSMYNDDIKHSLKLK 320
Query: 286 ISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
IS+ER+G EI+ M+ G P+ ++ I L L+ +F
Sbjct: 321 ISQERIGIEIEKMLRGPDPLGSLEIINRLGLYDTIF 356
>gi|212530828|ref|XP_002145571.1| tRNA nucleotidyltransferase [Talaromyces marneffei ATCC 18224]
gi|210074969|gb|EEA29056.1| tRNA nucleotidyltransferase [Talaromyces marneffei ATCC 18224]
Length = 534
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/276 (43%), Positives = 159/276 (57%), Gaps = 24/276 (8%)
Query: 70 IELTDTETKIFSCLLN-----------TLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIA 118
IELT E I LL+ R E VLR GGWVRDKLLG +DID+A
Sbjct: 14 IELTPLEKTIQRLLLDLKEYIEKREQSVGRTAQEEMVLRFTGGWVRDKLLGVSSHDIDVA 73
Query: 119 LDNMMGSEFATKVAEYLSATGETAPS-------------GFGVIPSNPDQSKHLETATMK 165
+ M G F T + EYL + I +NP++SKHLET T +
Sbjct: 74 ISTMTGLRFGTYLQEYLEESDNLKKYMNNKEFAFTDEMLKVHTIKANPEKSKHLETVTTR 133
Query: 166 LYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRG 225
L+ L ID VNLR E Y+E SR P + FGTA+EDA RRD T+N+LF+N+NTS +ED TG G
Sbjct: 134 LFGLDIDLVNLRKETYTELSRNPQVEFGTAKEDALRRDATVNALFFNLNTSMLEDFTGLG 193
Query: 226 IADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAK 285
+ D++ I TPL P TF DDPLRVLR IRF +R + +DE+ ++A +++K A K
Sbjct: 194 LDDMERKLIRTPLEPYQTFKDDPLRVLRLIRFASRLGYHIDEKTQEAMQDEDIKKAFKLK 253
Query: 286 ISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
IS+ERVG E++ + G P + +I L L+ +F
Sbjct: 254 ISKERVGIEMEKTLRGPDPRIGLKYIDDLGLYTTIF 289
>gi|406868643|gb|EKD21680.1| poly A polymerase head domain-containing protein [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 550
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 122/247 (49%), Positives = 153/247 (61%), Gaps = 15/247 (6%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNL------ETVLRVAGGWVRDKLLGKDCYDIDIALDNM 122
KI LT E+++ LL+ R+ + + LR AGGWVRDKLLG +DID A++ M
Sbjct: 5 KINLTPRESQLRELLLDVARYIDESKQIKEKIELRFAGGWVRDKLLGIPSHDIDTAINAM 64
Query: 123 MGSEFATKVAEYLS--------ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFV 174
G F+TK+ EYL A I +NP++SKHLETAT K++ +DFV
Sbjct: 65 TGYAFSTKMQEYLKDEENLKKHALEAKDLGNLHKILANPEKSKHLETATTKIFGFDVDFV 124
Query: 175 NLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKI 234
NLR E YS++SR P M FGTAEED+ RRD TIN+LFYN+ T VED T G+ DL +I
Sbjct: 125 NLRKETYSDDSRNPQMEFGTAEEDSLRRDATINALFYNLGTDLVEDFTS-GLEDLAARRI 183
Query: 235 VTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTE 294
TPL PK TF DDPLRVLR IRF +R DF +D + A V AL KISRERVG E
Sbjct: 184 QTPLEPKTTFTDDPLRVLRLIRFASRLDFNIDAASEAAMGDPVVMEALKLKISRERVGVE 243
Query: 295 IDLMVSG 301
++ M+ G
Sbjct: 244 LEKMLKG 250
>gi|169806160|ref|XP_001827825.1| tRNA nucleotidyltransferase-polyA polymerase [Enterocytozoon
bieneusi H348]
gi|161779273|gb|EDQ31296.1| tRNA nucleotidyltransferase-polyA polymerase [Enterocytozoon
bieneusi H348]
Length = 438
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 153/231 (66%), Gaps = 6/231 (2%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
++LT+ ETKI + L + + + R+AGGWVRDKLLGK D+DIALDN+ G +FAT
Sbjct: 1 MQLTEIETKIINLLKDYSQTLIPPVIPRIAGGWVRDKLLGKKTNDMDIALDNITGIQFAT 60
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
+ Y+ G I +NP +SKHLETA + L+ L IDFV+LR E Y+ SRIP
Sbjct: 61 GLISYIGIDIHV-----GKIMANPKKSKHLETAVIHLFGLTIDFVHLRTESYT-TSRIPQ 114
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
+ GT +EDAYRRD+TIN+LFYN+ T+ +ED TG+G+ DL++ I TPL P T LDDPL
Sbjct: 115 ITHGTPQEDAYRRDITINALFYNLVTNEIEDFTGKGLYDLQNKIIDTPLNPNVTLLDDPL 174
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVS 300
R+LR RF +F+F +++ + A D ++ A + KIS ER+ E+ M++
Sbjct: 175 RILRIFRFSVKFNFKINDRIYNAIKHDNIRIAFSTKISCERIWNELFTMLN 225
>gi|302663486|ref|XP_003023385.1| hypothetical protein TRV_02487 [Trichophyton verrucosum HKI 0517]
gi|291187379|gb|EFE42767.1| hypothetical protein TRV_02487 [Trichophyton verrucosum HKI 0517]
Length = 533
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 164/276 (59%), Gaps = 23/276 (8%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLET---------VLRVAGGWVRDKLLGKDCYDIDIAL 119
+++L+ E + + LL+T+ + + +LR GGWVRDK+LG D DID+ +
Sbjct: 11 EVQLSSEEALLRTLLLDTVEYIRRKNNDDPKGSGLILRFTGGWVRDKVLGVDSQDIDVGI 70
Query: 120 DNMMGSEFATKVAEYLSATG--------------ETAPSGFGVIPSNPDQSKHLETATMK 165
M G EF + EYL + G I +NP++SKHLET T++
Sbjct: 71 STMTGYEFGLALKEYLDIPENLERYKAHYPEHALKGVIGGLHKIAANPEKSKHLETTTIR 130
Query: 166 LYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRG 225
++ +D VNLR E Y++ SR P + FGTAEEDA RRD T+N+LFYN++T VED TG G
Sbjct: 131 VFGFDVDLVNLRKETYTDTSRNPQVEFGTAEEDALRRDATVNALFYNLHTGEVEDFTGMG 190
Query: 226 IADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAK 285
++D++ I TPL P TF DDPLRVLR IRF +R + +D +++ D++K +L K
Sbjct: 191 LSDMEAKLIRTPLAPYQTFKDDPLRVLRLIRFASRLGYTIDPNTEESMCDDDIKHSLRLK 250
Query: 286 ISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
IS+ER+G EI+ M+ G P+ A+ I L L+ +F
Sbjct: 251 ISQERIGIEIEKMLRGPDPLGALMIINRLGLYDTIF 286
>gi|300708561|ref|XP_002996457.1| hypothetical protein NCER_100453 [Nosema ceranae BRL01]
gi|239605761|gb|EEQ82786.1| hypothetical protein NCER_100453 [Nosema ceranae BRL01]
Length = 296
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 116/257 (45%), Positives = 161/257 (62%), Gaps = 8/257 (3%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
+T+ E IF +L+ + V RVAGGWVRDKL+G + YD+DIAL+N+ G EFA
Sbjct: 5 ITNEEENIFKMILSCTPN---NVVPRVAGGWVRDKLMGINSYDMDIALENITGYEFA--- 58
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
+ L + + S V+ NPD+SKHLETA ++ + IDFVNLRCE Y++ +RIP +
Sbjct: 59 -KLLEQKFKDSMSNVNVVQINPDKSKHLETAVCRINGILIDFVNLRCEKYTD-TRIPLIT 116
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
GTA+EDA+RRDLTIN+LFYN+ T VED TG GI D+K+ + TPL P TF DDPLR+
Sbjct: 117 IGTAQEDAFRRDLTINALFYNLITKEVEDFTGMGIKDIKNKILRTPLDPFITFSDDPLRI 176
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
LR RF A+ +F + E++K+ + ++K L K+S+ERV EI M++ + +
Sbjct: 177 LRLFRFKAKLNFDIYSEIQKSLNNLDLKLHLKNKVSKERVNIEIFKMINYKYGYLGIHEL 236
Query: 312 CGLTLFWIVFKLPLQVE 328
VF L L E
Sbjct: 237 IQYEYIESVFNLKLNKE 253
>gi|389583746|dbj|GAB66480.1| tRNA nucleotidyltransferase, partial [Plasmodium cynomolgi strain
B]
Length = 747
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 149/241 (61%), Gaps = 3/241 (1%)
Query: 57 EPPRPVVVQVRDKIELT--DTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYD 114
PP +Q+ + I+ T E ++F+ L + L+ LRV GGWVRDK LG D
Sbjct: 105 HPPPDEALQIEELIKKTMRKEEEELFTFLQKVNETYKLQCTLRVVGGWVRDKFLGISNDD 164
Query: 115 IDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFV 174
ID+ +DNM GSEF + +Y+ E FG+I N DQSKHLET++ L++ +D V
Sbjct: 165 IDLTVDNMKGSEFCNYIKQYIQEK-EKKNFNFGIIKINSDQSKHLETSSFHLFNFQVDIV 223
Query: 175 NLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKI 234
NLR E Y+E SRIP + GT EEDA RRD T+N+LFYN++T VED T RGI LK+ I
Sbjct: 224 NLRNEKYTEESRIPEIVIGTPEEDALRRDFTVNALFYNLSTRRVEDYTRRGILHLKNKVI 283
Query: 235 VTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTE 294
TPL P +TF DDPLR++R IRF F+F +++ + ++ + A KISR R+ TE
Sbjct: 284 CTPLDPLSTFQDDPLRIIRCIRFCGFFNFFVEKSIFDVLKNEHIMKAFKKKISRSRLSTE 343
Query: 295 I 295
I
Sbjct: 344 I 344
>gi|183232594|ref|XP_652076.2| tRNA nucleotidyltransferase [Entamoeba histolytica HM-1:IMSS]
gi|169801970|gb|EAL46694.2| tRNA nucleotidyltransferase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704107|gb|EMD44410.1| tRNA nucleotidyltransferase, putative [Entamoeba histolytica KU27]
Length = 461
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 125/364 (34%), Positives = 191/364 (52%), Gaps = 24/364 (6%)
Query: 86 TLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSG 145
T+ HF L T++RV GGWVRDKLLGK+ +DIDI +DNM +F+ + +Y++ + SG
Sbjct: 16 TVLHFKLSTIIRVVGGWVRDKLLGKESHDIDITVDNMQSYQFSQYLQKYINENTQHNVSG 75
Query: 146 FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLT 205
G+I N KHLETAT+++ ++ ID LR DY +N + GT EDA RRD T
Sbjct: 76 IGIIHKNHSAGKHLETATLRIDNIAIDICCLRASDYCDNDE---EKIGTPLEDAQRRDFT 132
Query: 206 INSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFIL 265
IN++FY +N +EDLTG G+ DLK I TP+ PK T DDP R LRAIRF + F+L
Sbjct: 133 INAMFYRVNDDQIEDLTGCGLNDLKSRIIRTPISPKETLHDDPARALRAIRFSGKMGFVL 192
Query: 266 DEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF-KLP 324
DEEL++ + + + + +SRER+G E+ M+ ++P + I F +F L
Sbjct: 193 DEELEQEMKTKYIGDKMISGLSRERLGRELIGMIQSDRPAYCIDQIRQFGYFKGLFGDLD 252
Query: 325 LQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNK 384
V+ EM+ + F +R + AAL + T + N+
Sbjct: 253 EITTTNVVRSYEMYAQKF-------------GAFELGRREIGFLAALLY---SVTRETNQ 296
Query: 385 GKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIP----SLVSAEDVKVNDGQWS 440
K++ ++ DSLK + ++ +H +++ L + V + V +W
Sbjct: 297 KKRMAKIHSVIIDSLKLSVKERNNIILVHNGVKELEQLSNKKEWTRVEVGRIVVASAEWW 356
Query: 441 KELV 444
KE +
Sbjct: 357 KESI 360
>gi|440494394|gb|ELQ76775.1| tRNA nucleotidyltransferase/poly(A) polymerase [Trachipleistophora
hominis]
Length = 639
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 166/264 (62%), Gaps = 7/264 (2%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
+I LT TE KI + + T H V R+AGGWVRDKLLGK DIDI ++ + G FA
Sbjct: 5 EIRLTPTEEKILT-KIKTYAHTLQGIVPRIAGGWVRDKLLGKLSNDIDITINRISGYAFA 63
Query: 129 TKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
+ + +Y TG G I +NP++SKHLETA M++ +++DF++LR E+Y + +RIP
Sbjct: 64 SGMQKYYGMTGSV-----GQIKANPEKSKHLETAVMRIEGVFVDFLSLRTEEYFD-TRIP 117
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
++ +A+EDA+RRDLTINSLFYNI VED TG+G++DL+ G I TP+ P T +DDP
Sbjct: 118 VVKSCSAQEDAFRRDLTINSLFYNIVEQRVEDFTGKGLSDLEQGVIRTPMEPLKTLIDDP 177
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LR+LR IRF RF F + ++L A ++ V+ L KIS ER+G E+ ++ + A
Sbjct: 178 LRILRVIRFSVRFRFKIADDLFMAFQNEHVRTNLHKKISNERIGQEMYKILGYEHFIHAF 237
Query: 309 THICGLTLFWIVFKLPLQVEPEVL 332
I L +FK + ++ +L
Sbjct: 238 KVITQCELVPAIFKKHIPIDQHIL 261
>gi|402079721|gb|EJT74986.1| poly(A) polymerase [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 588
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/245 (46%), Positives = 153/245 (62%), Gaps = 9/245 (3%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET-----APSGFG-- 147
VLR AGGWVRDKLLG + +DID+A+++M G F + + E+ + P G
Sbjct: 81 VLRWAGGWVRDKLLGIESHDIDVAINSMTGEAFTSHLVEFCADPANVERHGVTPGDIGNL 140
Query: 148 -VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTI 206
I +NPD+SKHLET +++ + +DFVNLR E Y+++SR P M FGTA+EDA RRD T+
Sbjct: 141 HKIAANPDKSKHLETVATRMFGIEVDFVNLRKETYAQDSRNPQMEFGTAKEDALRRDATV 200
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
N+LFYNINT +ED G G+ DL+ I TPL P TF DDPLRVLR +RF +R F +D
Sbjct: 201 NALFYNINTDEIEDFVG-GMLDLERKLIRTPLEPLQTFTDDPLRVLRLVRFASRLGFSID 259
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQ 326
++ + V AL KISRERVG E+D M+ G P ++ I L L+ VF P +
Sbjct: 260 PAAEETMSKPAVLEALRLKISRERVGIEVDKMLKGKHPRDSLHLIERLRLYGAVFTDPTR 319
Query: 327 VEPEV 331
+ V
Sbjct: 320 GQEGV 324
>gi|384488604|gb|EIE80784.1| hypothetical protein RO3G_05489 [Rhizopus delemar RA 99-880]
Length = 433
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 171/291 (58%), Gaps = 5/291 (1%)
Query: 123 MGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYS 182
MG EFAT V +Y + ++ S I SNP++S+HLETAT +++D +DF NLR E Y
Sbjct: 1 MGYEFATFVNKYFESHDQSTRS-IAKIDSNPEKSRHLETATTRIFDQEVDFCNLRTEVYE 59
Query: 183 ENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPK 241
SRIP+ + FGT +EDAYRRD+T+NSLFYN+NT VED T GI DL G I T
Sbjct: 60 PGSRIPSHITFGTPKEDAYRRDITVNSLFYNVNTMQVEDFTECGIQDLTDGIIRTTFSSF 119
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
+F DDPLRV+R IRF +RF F L E+ +AA E+K+AL +K+SRER+GTE D M+ G
Sbjct: 120 VSFRDDPLRVIRCIRFASRFGFELTTEICEAAKHPEIKSALISKVSRERIGTEFDKMIKG 179
Query: 302 NQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDD 361
P+ ++ I L L+ IV + P + + ++ A W +L+ S N
Sbjct: 180 PHPLLSIQLIHQLELYPIVIQAPSNIISGNVAESKVAVNAVGIVCWLGDKLLKPS--NAA 237
Query: 362 QRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNI 412
++R +A LPF T + K K +P V RD++K +D TV I
Sbjct: 238 EKRHMLLSACVLPFLGVT-AEQKKKPVPAVGLVLRDAIKTTNADMNTVSTI 287
>gi|322692774|gb|EFY84664.1| putative tRNA nucleotidyltransferase [Metarhizium acridum CQMa 102]
Length = 499
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 158/248 (63%), Gaps = 15/248 (6%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFN------LETVLRVAGGWVRDKLLGKDCYDIDIAL 119
+R I+L E ++ LL+ + N ++R AGGWVRDKLLG + +DID+A+
Sbjct: 1 MRPVIQLNTQEDRLRRLLLDVSQSINDSKLTIQPVIVRWAGGWVRDKLLGIESHDIDVAI 60
Query: 120 DNMMGSEFATKVAEYLSATGET-----APSGFGV---IPSNPDQSKHLETATMKLYDLWI 171
+ M G +FA ++ EY S + P G I NPD+SKHLETA ++++ L +
Sbjct: 61 NAMTGFDFAQRMREYCSTEKASRIHAIKPDDIGNLHNISKNPDKSKHLETAMVRIFGLDL 120
Query: 172 DFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKH 231
D VNLR E Y+E+SR PT+ FGTAEEDA RRD TIN+ FYNI+T +ED TG G+ DL
Sbjct: 121 DLVNLRKETYAEDSRNPTVEFGTAEEDALRRDATINAFFYNIHTDEIEDFTG-GMRDLTA 179
Query: 232 GKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERV 291
+ TPL P TF DDPLRVLR +RF +R F ++EE +K + EV AL KISRERV
Sbjct: 180 KVLRTPLNPLETFKDDPLRVLRLVRFASRLGFSIEEETRKVMSHPEVLDALQVKISRERV 239
Query: 292 GTEIDLMV 299
GTE++ M+
Sbjct: 240 GTELEKML 247
>gi|322709898|gb|EFZ01473.1| putative tRNA nucleotidyltransferase [Metarhizium anisopliae ARSEF
23]
Length = 514
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/244 (48%), Positives = 154/244 (63%), Gaps = 15/244 (6%)
Query: 70 IELTDTETKIFSCLLNTLRHFN------LETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
I+L E ++ LL+ + N V+R AGGWVRDKLLG + +DID+A++ M
Sbjct: 22 IQLNAQEDRLRRLLLDVSQSINDSKLTVQPVVVRWAGGWVRDKLLGIESHDIDVAINAMT 81
Query: 124 GSEFATKVAEYL-----SATGETAPSGFGV---IPSNPDQSKHLETATMKLYDLWIDFVN 175
G FA ++ EY S P G + NPD+SKHLETA ++++ L +D VN
Sbjct: 82 GIHFAQRMREYCNTEKGSRIHAIKPDDIGNLHNVSKNPDKSKHLETAMVRIFGLDLDLVN 141
Query: 176 LRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIV 235
LR E Y+E+SR PT+ FGTAEEDA RRD TIN+ FYNI+T +ED TG G+ DL +
Sbjct: 142 LRKETYAEDSRNPTVEFGTAEEDALRRDATINAFFYNIHTEQIEDFTG-GMRDLTAKVLR 200
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
TPL P TF DDPLRVLR +RF +R F ++EE KK A EV AL KISRERVGTE+
Sbjct: 201 TPLSPLETFKDDPLRVLRLVRFASRLGFSIEEETKKVMAHPEVLDALQVKISRERVGTEL 260
Query: 296 DLMV 299
+ M+
Sbjct: 261 EKML 264
>gi|440290636|gb|ELP84001.1| polyA polymerase, putative [Entamoeba invadens IP1]
Length = 465
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 185/346 (53%), Gaps = 20/346 (5%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
+I LTDTET IF+ L T+ ++ T+LRV GGWVRDKLLG++ +DIDI +DNM +F+
Sbjct: 4 QIVLTDTETMIFTLLRQTVATYSTHTILRVVGGWVRDKLLGRESHDIDITVDNMPSYDFS 63
Query: 129 TKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
+ +Y+ SG GVI NP KHL T+T+++ ++ ID LR E++ +S
Sbjct: 64 VYLQKYIQENTTHQISGIGVIQPNPSSGKHLLTSTLRIDNIPIDICCLRPENFGSDS--- 120
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
GT DA RRD TINSLFY +N +ED+T +G++DL I TP+PP+ T +DDP
Sbjct: 121 -TGVGTPLSDARRRDFTINSLFYRVNDGVIEDMTQQGLSDLSAHVIRTPIPPQETLVDDP 179
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LR LRAIRF A+ + +D L + SD +K + + ISRER+G EI M+
Sbjct: 180 LRALRAIRFSAKMCYTIDPHLIEVMKSDTLKIGICSTISRERIGNEILGMIQTGHQSYCF 239
Query: 309 THICGLTLFWIVFKLPLQVEP-EVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQ 367
+ + + ++F +V+ V++ E A+ + FN++ R
Sbjct: 240 EKLMEVGYYTVIFGECDEVQVLSVMKSYEELSKAF-------------TIFNEEHRVYGA 286
Query: 368 YAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIH 413
A+ F D K K+P V ++LK + V IH
Sbjct: 287 IASATFWF--IGMNDLKNMKVPRVQGIIMEALKLSTAIKNNVALIH 330
>gi|321251913|ref|XP_003192221.1| tRNA adenylyltransferase [Cryptococcus gattii WM276]
gi|317458689|gb|ADV20434.1| tRNA adenylyltransferase, putative [Cryptococcus gattii WM276]
Length = 504
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 195/344 (56%), Gaps = 20/344 (5%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I L+ +E + L + + R+AGGWVRDKLL D+DIAL G FA
Sbjct: 28 IALSPSEATFVALLDDFANRLSPPVECRIAGGWVRDKLLSLPSSDLDIALSIPSGHSFAV 87
Query: 130 KVAEYLSATGETAPSG-FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
++L A + P+G G + +NP+QSKHLET T ++ L DFV LR E Y+ +SRIP
Sbjct: 88 AFVDFLKA--KNVPTGSVGKVVANPEQSKHLETGTTRIMGLECDFVGLRSETYA-DSRIP 144
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
++ GT EDA RRDLTIN+LFYN++T VED T G++DL++ TPLPP+ TF DDP
Sbjct: 145 QVKPGTPFEDASRRDLTINALFYNVHTRQVEDYTKMGLSDLENRIARTPLPPRQTFQDDP 204
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LR++R +RF +RF+ + +E+ ++ ++VKA + +K+S+ER+G E M+ N P A+
Sbjct: 205 LRIVRCVRFASRFNLTIAQEVTESIKQEDVKAGILSKVSKERIGIETTKMLH-NNPFHAL 263
Query: 309 THICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQY 368
+ I L L+ +F +++P E F A + L Q+ + ++ +
Sbjct: 264 SLIHSLDLYPYMFS--CEIDPPRQEA---FAAAQI-----LNQVAKRKSVDE----VLWL 309
Query: 369 AALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNI 412
A +PFR T K KG+ +P + + LK ++ +NI
Sbjct: 310 ATAAVPFRGLTVK-RKGRDVPASSVVISEGLKTSVTNLFDAVNI 352
>gi|449295885|gb|EMC91906.1| hypothetical protein BAUCODRAFT_126876 [Baudoinia compniacensis
UAMH 10762]
Length = 877
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 178/330 (53%), Gaps = 39/330 (11%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGV------ 148
VLR GGWVRDKLLG D +DID+A++ M G +F ++ EYL G P +G+
Sbjct: 64 VLRFTGGWVRDKLLGVDSHDIDVAVNKMTGFQFGLRLKEYLEIPGN--PEKYGLEGVATT 121
Query: 149 ---------------------IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRI 187
I +NP++SKHLET T ++ L ID VNLR E Y+++SR
Sbjct: 122 DKQNQKVTSTDKSKIVGGLHKIEANPEKSKHLETVTTRILGLDIDIVNLRKETYTDDSRN 181
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDD 247
P M FGT EEDA RRD T+N++FYN+NT +ED TGRG D++ + TPL P TF DD
Sbjct: 182 PQMEFGTPEEDALRRDATVNAMFYNLNTEEIEDFTGRGHDDMRDKILRTPLDPHQTFKDD 241
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
PLRVLR IRF +R + +D + A ++K AL KISRERVG EI+ + P +A
Sbjct: 242 PLRVLRLIRFASRLQYQVDPKALAAMRDADIKDALRRKISRERVGIEIEKSLRKGHPHEA 301
Query: 308 MTHICGLTLFWIVFKLPL-----QVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQ 362
+ + L L+ +F P +P+ +G + D D + + D++
Sbjct: 302 LRLVFKLDLYETIFSDPTVETADHYKPDT-DGWQTMIDVLQDMT-DNDRTLARHLTRDEE 359
Query: 363 RRLSQY-AALFLPFRNTTYKD--NKGKKIP 389
S + A +P+R+ + G+K+P
Sbjct: 360 ENFSAWLLAALVPYRDAPQPEPPAPGRKLP 389
>gi|19173101|ref|NP_597652.1| tRNA ADENILYL TRANSFERASE [Encephalitozoon cuniculi GB-M1]
gi|19168768|emb|CAD26287.1| tRNA ADENILYL TRANSFERASE [Encephalitozoon cuniculi GB-M1]
gi|449330133|gb|AGE96396.1| tRNA adenilyl transferase [Encephalitozoon cuniculi]
Length = 464
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/271 (42%), Positives = 169/271 (62%), Gaps = 6/271 (2%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
+I T+ E IFS + + + F V RVAGGWVRDK++G +D+DIAL+N+ G +FA
Sbjct: 4 RINCTEAEKDIFSLIRSHAKGFG-NVVPRVAGGWVRDKIMGNPSFDMDIALENISGYKFA 62
Query: 129 TKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
+ + SATG+ + VI NP++SKHLETA +++ +DFVNLR E YSE +RIP
Sbjct: 63 VGLVQ--SATGQKL-TDVHVIKDNPEKSKHLETAVVRINGFCVDFVNLRNETYSE-TRIP 118
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
++ GT +EDA+RRDLTINSLFYN+ T +ED TGRG+ D+ + TPL P+ T LDDP
Sbjct: 119 NVKPGTPQEDAFRRDLTINSLFYNLFTEEIEDYTGRGLEDIGRKVLATPLDPRTTLLDDP 178
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LR++R RF ++ F +D+++ +A VK ALA K+S ER+ EI ++ + +
Sbjct: 179 LRLVRIFRFHSKLGFTIDKKIDEALEDKRVKVALAKKVSNERIHIEIFKILRYPRGQYGL 238
Query: 309 THICGLTLFWIVFKLPLQVEPEVLEGCEMFC 339
I +FK P++ +G +FC
Sbjct: 239 LEIVRRDYVEPIFKPPVESRTSYEKGL-VFC 268
>gi|71019801|ref|XP_760131.1| hypothetical protein UM03984.1 [Ustilago maydis 521]
gi|46099761|gb|EAK84994.1| hypothetical protein UM03984.1 [Ustilago maydis 521]
Length = 763
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/281 (44%), Positives = 162/281 (57%), Gaps = 53/281 (18%)
Query: 97 RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG--------------ETA 142
R+AGGWVRDKLL +D D+DI+L + G+ FA + YLS++ E +
Sbjct: 103 RIAGGWVRDKLLARDSDDLDISLSTLTGNAFALYLKHYLSSSAFASSPLSRSPFFSEEGS 162
Query: 143 PSG-FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYR 201
G G I +NP+QSK+LETAT ++ L +DFVNLR E Y SRIPTM FGT +EDA R
Sbjct: 163 EMGRIGKIAANPEQSKNLETATARVLGLSLDFVNLRKETYDPGSRIPTMTFGTPKEDAER 222
Query: 202 RDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF 261
RD+TINSL YN++T VED TG G+ DL G I TPLPP TFLDDPLRVLR +RF +RF
Sbjct: 223 RDITINSLLYNVHTRQVEDHTGLGLQDLASGLIRTPLPPLTTFLDDPLRVLRCVRFASRF 282
Query: 262 DFIL---------------------DEELKKAAAS-----------------DEVKAALA 283
+ L D L + A+S D+++ AL
Sbjct: 283 TYELHPTIIRCLTGAKVADGTDNDADSSLAQLASSDDPRISVQGKAGVEFGRDQIRDALV 342
Query: 284 AKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
+K+SRER G E+D M+ G QP+ A+ + L LF +VF P
Sbjct: 343 SKVSRERFGIEVDKMIKGPQPLLALLLLHRLELFPLVFHPP 383
>gi|387597207|gb|EIJ94827.1| tRNA-nucleotidyltransferase [Nematocida parisii ERTm1]
Length = 458
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 187/354 (52%), Gaps = 13/354 (3%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
+ +T E K+F+ LL L+ RVAGGWVRD+L+G C DIDIA+D G+ F
Sbjct: 2 LRITPIEEKLFTELLEYNDKIGLDMTFRVAGGWVRDRLMGIPCDDIDIAIDRSSGAVFTA 61
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
+L E G+ VI N ++SKHLETA+++ DL IDFV LR E+Y+ ++RIPT
Sbjct: 62 GFITHLHGKSEEV-RGYHVIECNHEKSKHLETASLRYMDLSIDFVALRTEEYT-DTRIPT 119
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
+R GT +EDA RRD+TIN+LFYNINT ++ED T RG+ D+K+ KI TPL P TFLDDPL
Sbjct: 120 VRTGTPQEDANRRDITINALFYNINTRTIEDYTERGLPDIKNKKIRTPLDPMETFLDDPL 179
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
R+LR +RF +R F + E+ + L +S+ERVG EI +S + A+
Sbjct: 180 RILRVLRFASRLSFEIVPEILSVLNKPSLHDKLNRVVSKERVGCEIKKTLSHTGYITAIK 239
Query: 310 HICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYA 369
+ + +F P+V E C A+ D L + +
Sbjct: 240 TMAQYRIVHALF-------PDVNLSFEDVC-AFTDTLSVLQGITDHPCTAIPSEEVYILR 291
Query: 370 ALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLI 423
L N K KG + Y ++ LK + E ++ I R L K L+
Sbjct: 292 IFILLQNNLHIKKGKGT---LTEYVIKELLKWTKIEREKIVQIERSLLKIDGLM 342
>gi|401825837|ref|XP_003887013.1| tRNA nucleotidyltransferase/poly(A) polymerase [Encephalitozoon
hellem ATCC 50504]
gi|392998170|gb|AFM98032.1| tRNA nucleotidyltransferase/poly(A) polymerase [Encephalitozoon
hellem ATCC 50504]
Length = 464
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 168/272 (61%), Gaps = 6/272 (2%)
Query: 68 DKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEF 127
++I T+ E IF ++ R F + RVAGGWVRDK++G +D+DIAL+N+ G +F
Sbjct: 3 NQINCTEAEEDIFDLIIRHARGFR-NVIPRVAGGWVRDKIMGNPSFDMDIALENISGYKF 61
Query: 128 ATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRI 187
A +A+ S G+ + VI NP++SKHLETA +++ +DFVNLR E YSE +RI
Sbjct: 62 AAGLAK--STRGQKL-TEVHVIKDNPEKSKHLETAVVRINGFCVDFVNLRSETYSE-TRI 117
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDD 247
P + GT +EDA+RRDLTINSLFYN+ T +ED TGRG+ D+K + TPL P+ T LDD
Sbjct: 118 PNINPGTPQEDAFRRDLTINSLFYNLFTREIEDYTGRGVDDIKRKILATPLDPRTTLLDD 177
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
PLR++R RF ++F F +DE++ +A + +K AL K+S ER+ EI ++ +
Sbjct: 178 PLRLVRIFRFHSKFGFKIDEKIDEALLDERIKPALEKKVSNERIHIEIFKILHYPRGQYG 237
Query: 308 MTHICGLTLFWIVFKLPLQVEPEVLEGCEMFC 339
+ I +FK P + +G +FC
Sbjct: 238 LLEIIRRGYVGPIFKPPAEKTTSYEKGA-VFC 268
>gi|387593553|gb|EIJ88577.1| tRNA-nucleotidyltransferase [Nematocida parisii ERTm3]
Length = 458
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 187/354 (52%), Gaps = 13/354 (3%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
+ +T E K+F+ LL L+ RVAGGWVRD+L+G C DIDIA+D G+ F
Sbjct: 2 LRITPIEEKLFTELLEYNDKIGLDMTFRVAGGWVRDRLMGIPCDDIDIAIDRSSGAVFTA 61
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
+L E G+ VI N ++SKHLETA+++ DL IDFV LR E+Y+ ++RIPT
Sbjct: 62 GFITHLHGKSEEV-RGYHVIECNHEKSKHLETASLRYMDLSIDFVALRTEEYT-DTRIPT 119
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
+R GT +EDA RRD+TIN+LFYNINT ++ED T RG+ D+K+ KI TPL P TFLDDPL
Sbjct: 120 VRTGTPQEDANRRDITINALFYNINTRAIEDYTERGLPDIKNKKIRTPLDPMETFLDDPL 179
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
R+LR +RF +R F + E+ + L +S+ERVG EI +S + A+
Sbjct: 180 RILRVLRFASRLSFEIVPEILSVLNKPSLHDKLNRVVSKERVGCEIKKTLSHTGYITAIK 239
Query: 310 HICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYA 369
+ + +F P+V E C A+ D L + +
Sbjct: 240 TMAQYRIVHALF-------PDVNLSFEDVC-AFTDTLSVLQGITDHPCTAIPSEEVYILR 291
Query: 370 ALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLI 423
L N K KG + Y ++ LK + E ++ I R L K L+
Sbjct: 292 IFILLQNNLHIKKGKG---TLTEYVIKELLKWTKIEREKIVQIERSLLKIDGLM 342
>gi|303388807|ref|XP_003072637.1| tRNA nucleotidyltransferase/poly(A) polymerase [Encephalitozoon
intestinalis ATCC 50506]
gi|303301778|gb|ADM11277.1| tRNA nucleotidyltransferase/poly(A) polymerase [Encephalitozoon
intestinalis ATCC 50506]
Length = 460
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/271 (42%), Positives = 170/271 (62%), Gaps = 6/271 (2%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
+I T+ E IF+ + + + F RVAGGWVRDK++G +D+DIAL+N+ G +FA
Sbjct: 4 QINCTEAEEDIFNLIRSHAKEFG-NVTPRVAGGWVRDKIMGHPSFDMDIALENISGYKFA 62
Query: 129 TKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
+ + S+TG+ + VI NP++SKHLETA +++ +DFVNLR E YSE +RIP
Sbjct: 63 AGLMK--SSTGQKL-TEVHVIKDNPEKSKHLETAVVRINGFCVDFVNLRNETYSE-TRIP 118
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
+ GT +EDA+RRDLTINSLFYN+ T VED TGRGI D+K+ ++TPL P+ T DDP
Sbjct: 119 NVNPGTPQEDAFRRDLTINSLFYNLFTKEVEDYTGRGIDDIKNKLLITPLDPRTTLFDDP 178
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LR++R RF ++ F +D ++++A + +K AL K+S ER+ EI ++ + +
Sbjct: 179 LRLVRIFRFHSKLGFKIDGKIEEALMDERIKRALGKKVSNERIHIEIFKILHYPRGQYGL 238
Query: 309 THICGLTLFWIVFKLPLQVEPEVLEGCEMFC 339
I VFK P++ E +G MFC
Sbjct: 239 LEIVRRGYVSPVFKPPVERETPYEKGL-MFC 268
>gi|162312548|ref|NP_594651.2| tRNA nucleotidyltransferase (predicted) [Schizosaccharomyces pombe
972h-]
gi|81175162|sp|Q9UTQ0.2|CCA1_SCHPO RecName: Full=Putative CCA tRNA nucleotidyltransferase 1; AltName:
Full=CCA-adding enzyme 1; AltName: Full=tRNA
CCA-pyrophosphorylase 1; AltName: Full=tRNA
adenylyltransferase 1; AltName: Full=tRNA
nucleotidyltransferase 1
gi|68638059|emb|CAB60249.2| tRNA nucleotidyltransferase (predicted) [Schizosaccharomyces pombe]
Length = 500
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 151/459 (32%), Positives = 229/459 (49%), Gaps = 44/459 (9%)
Query: 70 IELTDTETKIFSCLLNTLRHFNL----ETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
+EL +TE ++ LN + E +R AGGWVRDKLL + +DID+A+D M G
Sbjct: 8 LELNETEKELSDIFLNVSKKIGQMDRKEPEVRFAGGWVRDKLLRIESHDIDVAIDCMSGF 67
Query: 126 EFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENS 185
EFA + YL+ + I +NP +SKHLETAT ++ + ID VNLR DY+ ++
Sbjct: 68 EFAQHLQSYLAQQHPDWETKVIKIDANPLKSKHLETATARIMGMDIDIVNLRHHDYTNSN 127
Query: 186 RIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFL 245
+ FGT EDA RRD TIN+LFYN+ + +VED TG+G+ DL + I TPL TF
Sbjct: 128 SSNKLVFGTPLEDALRRDATINALFYNLKSKTVEDFTGKGLVDLSNKIIRTPLVADETFG 187
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
DDPLR +R IRF ++DF + EE K + E+ L + ISRER+G E+D M+
Sbjct: 188 DDPLRAVRCIRFATKYDFNIHEETIKGLKNPELHERLRSSISRERIGVEVDKMLKHCNTN 247
Query: 306 KAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDL-----TQLIGSSTFND 360
+A+ I L +F +F PL++ + L+ + + + A DL + + +
Sbjct: 248 RALKIIHSLGMFACIFG-PLEIHTKKLQSKNIESLSLIPYAIDLFGYLQKKDVSIKNLSS 306
Query: 361 DQRRLSQYAALFLPFRN-TTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKF 419
+ + A LP+ N + + +K K +P + RDSLK I +E F
Sbjct: 307 SSKYIFWLAIATLPWYNWSILEKSKIKILPPI--LIRDSLKYSKP-------IMSQVENF 357
Query: 420 LSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWR----VALLIST 475
P ++S +V +G+ + R+ G L+RE+ WR A ++T
Sbjct: 358 FVHYPLIMSKINVLEKEGKLT------------RLGCGRLVRELGPHWRDIIDWAFFMNT 405
Query: 476 LLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGM 514
L+ + + Q D + F K I + GM
Sbjct: 406 LISNSDI--------QRLNKDEEVTWFHVLVKHIEEYGM 436
>gi|428672387|gb|EKX73301.1| tRNA nucleotidyltransferase/polyA polymerase family member protein
[Babesia equi]
Length = 570
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 206/420 (49%), Gaps = 58/420 (13%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I +T++E ++F LL + ++L LRV GGWVRDKLL DIDIAL M G EF
Sbjct: 102 ITITESEKRLFDLLLGCVEVYSLNMDLRVVGGWVRDKLLNLGSKDIDIALPTMTGVEFCE 161
Query: 130 KVAEYLSATGETAPSGF----GVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENS 185
+ Y S GF GV+ P+QSKHLETATM + +DFVNLR EDY+ NS
Sbjct: 162 HLNRYTSEK-----FGFQRTIGVVKRCPEQSKHLETATMNILGFDVDFVNLRSEDYANNS 216
Query: 186 RIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFL 245
RIP MR GT EDA RRD T+N++FYNI +ED TG GI DL I T P TF+
Sbjct: 217 RIPVMRIGTPFEDAQRRDFTVNAIFYNITRGIIEDFTGFGIEDLHDKVIRTCSPAFETFM 276
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
DDPLRV+RAIRF R F L +++ + ++ +V AL K+SR R+ EID ++S V
Sbjct: 277 DDPLRVIRAIRFTCRLKFDLHKDILDSISNKDVLKALNDKVSRPRISQEIDGILSKGDIV 336
Query: 306 KAMTHICGLTLFWIVFKLP--------LQVEPEVL-EGCEMFCTAYLDAAWDLTQLIGSS 356
+ + ++ +P ++ VL EGC + + L LI
Sbjct: 337 PGFKLLKDFKVLNLLLGVPDDGTVDKQSRLSDNVLVEGCRLMES--------LKTLIRDD 388
Query: 357 TFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLK---RKASDAETVMNIH 413
++ L AAL P T N G K+ V Y ++ K + AS AE +
Sbjct: 389 FIDEKYIYL---AALVAP---TIDMPNIG-KMTVAEYLIKERFKLPNKYASSAEAIAQGS 441
Query: 414 RVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWRVALLI 473
+ E + +P+ D LR G +R+ W+ +LL+
Sbjct: 442 VLFENLVDALPT----------------------DELDLRQALGLAIRKAGLLWKESLLL 479
>gi|440639252|gb|ELR09171.1| hypothetical protein GMDG_03749 [Geomyces destructans 20631-21]
Length = 583
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 173/307 (56%), Gaps = 25/307 (8%)
Query: 39 NTTRNLGF-------LRCKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFN 91
++ RN GF + A+M Q RP V +I LT E+K+ + LL+ R+ +
Sbjct: 39 SSHRNRGFKKFPRKTIMASASMG-QATLRPGDVVATARITLTPQESKLRNLLLDVARYID 97
Query: 92 --------LETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS------A 137
LE LR AGGWVRDKLL DID A+++M G F+ K+ EYL
Sbjct: 98 ESKEIKERLE--LRFAGGWVRDKLLAIPSNDIDTAINSMTGYAFSLKMKEYLDLPENRLK 155
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
G S I +NP++SKHLET T KL +DFVNLR E Y+ +SR P M FGTA E
Sbjct: 156 HGIENVSNLHKIAANPEKSKHLETVTTKLLGYDLDFVNLRKETYTVDSRNPQMEFGTARE 215
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRF 257
DA RRD TIN+LFYNI+T VED G G+ADL I TPL P TF+DDPLRVLR IRF
Sbjct: 216 DALRRDATINALFYNIHTDEVEDFAG-GLADLDARLIRTPLEPHQTFVDDPLRVLRLIRF 274
Query: 258 GARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF 317
+R F +D + + + + AL KISRERVG E++ M++ A I L L+
Sbjct: 275 ASRLSFRIDTDSELSMGDPAILDALKLKISRERVGVEMEKMMNDKNTRTAFDLIDRLGLY 334
Query: 318 WIVFKLP 324
+F P
Sbjct: 335 TTIFTNP 341
>gi|213404356|ref|XP_002172950.1| tRNA nucleotidyltransferase [Schizosaccharomyces japonicus yFS275]
gi|212000997|gb|EEB06657.1| tRNA nucleotidyltransferase [Schizosaccharomyces japonicus yFS275]
Length = 487
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 188/346 (54%), Gaps = 22/346 (6%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVL-----RVAGGWVRDKLLGKDCYDIDIALDNMM 123
K+ L + E K+ + L T + L R+AGGWVRDKLLG DID+ L ++
Sbjct: 4 KLVLNEIEQKVINLLKKTADYVEKTKSLTSLEVRLAGGWVRDKLLGCQSNDIDVTLKDIS 63
Query: 124 GSEFATKVAEYLSATGET----APSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCE 179
G +FA + E++ + T A S G + +NP+QS+HLETATM LY L IDFV+LR E
Sbjct: 64 GQDFALAIVEFVRSQEATTLVPADSVLGKLVTNPEQSQHLETATMGLYGLDIDFVSLRAE 123
Query: 180 DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP 239
Y ++SRIP + GT DA RRD T+NSLFYN+ T +ED+TGRG+ DL +VTP+
Sbjct: 124 TYPDSSRIPVVTPGTVLTDALRRDFTVNSLFYNVRTDEIEDITGRGLKDLASRSLVTPVD 183
Query: 240 PKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
A+F+DDPLR+LR IRF +RF+F L + A +V K+S+ER+G E+ M+
Sbjct: 184 AVASFIDDPLRILRGIRFASRFNFTLHDTFFNAIRHPKVLDVFFIKLSKERIGEELSKML 243
Query: 300 SGNQPVKAM-----THICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIG 354
+ P A+ T I L L + QV+ L + DA+ + L
Sbjct: 244 NSTNPEVAVGMLYDTGIAALILDEFTPEQYKQVQ-RALVAARQAVNYFSDASTQPSPLSS 302
Query: 355 SSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLK 400
+ F + A +P+RN + K K++ V T RD LK
Sbjct: 303 TGDF------VVWLFATLVPWRNEKMLEKK-KEVYVPTKTSRDRLK 341
>gi|343425066|emb|CBQ68603.1| related to tRNA nucleotidyltransferase [Sporisorium reilianum SRZ2]
Length = 763
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/281 (44%), Positives = 160/281 (56%), Gaps = 53/281 (18%)
Query: 97 RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS----ATGETAPSGF------ 146
R+AGGWVRDKLL +D D+DI+L + G+ FA + YLS A A S F
Sbjct: 103 RIAGGWVRDKLLARDSDDLDISLSTLTGNAFALYLKHYLSSPSFAASPLARSPFFSDEGS 162
Query: 147 -----GVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYR 201
G I +NP+QSK+LETAT ++ L +DFVNLR E Y SRIPTM FGT +EDA R
Sbjct: 163 EMGRIGKIAANPEQSKNLETATARVLGLSLDFVNLRKETYDPGSRIPTMTFGTPKEDAER 222
Query: 202 RDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF 261
RD+TINSL YN++T VED TG G+ DL G I TPLPP TFLDDPLRVLR +RF +RF
Sbjct: 223 RDITINSLLYNVHTRQVEDHTGLGLQDLASGLIRTPLPPLTTFLDDPLRVLRCVRFSSRF 282
Query: 262 DFIL---------------------DEELKKAAAS-----------------DEVKAALA 283
+ L + L + A+S D+++ AL
Sbjct: 283 AYELHPTIIRCLTGANVAGNPADGAETSLDQLASSDDPRVSTQGSRGVESGRDQIRDALV 342
Query: 284 AKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
+K+SRER G E+D M+ G P+ A+ + L LF +VF P
Sbjct: 343 SKVSRERFGIEVDKMIKGPNPLLALFLLHRLELFPLVFHPP 383
>gi|342320648|gb|EGU12587.1| Hypothetical Protein RTG_01135 [Rhodotorula glutinis ATCC 204091]
Length = 630
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/239 (50%), Positives = 156/239 (65%), Gaps = 13/239 (5%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIAL--DNMMGSEFATKVAEYLSATGETAPSG-FGVIPSN 152
LRVAGGWVRDKLLG+ DID++ D + G +FA +YL G+ G I +
Sbjct: 62 LRVAGGWVRDKLLGRQSDDIDVSTSPDPITGLKFAMLFEKYLETLGQRDLMGRLTKIEAK 121
Query: 153 PDQSKHLETATMKLYDLWIDFVNLRCED-YSENSRIPTMRFGTAEEDAYRRDLTINSLFY 211
P+QSKHLETAT ++ DL +D+V R ++ Y+E SRIPT+ FGT EDA RRDLTINSLFY
Sbjct: 122 PEQSKHLETATARVCDLSVDWVQQRGQEVYTEGSRIPTVAFGTPLEDAERRDLTINSLFY 181
Query: 212 NINTSSVEDLTGRGIADL-----KHGKIVTPLPPKATFLDDPLRVLRAIRFGARF--DFI 264
N+ T +ED TG+G++DL + KI TPL P TF DDPLRV+RA+RF ARF ++
Sbjct: 182 NLRTRLIEDQTGKGLSDLGFVPGQPKKIRTPLEPVKTFRDDPLRVVRAVRFAARFGREYE 241
Query: 265 LDEELKKAAASDEVKAAL--AAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
LD E+ +A +E+K AL KISRERVG E+D M+ G P A I L L ++F
Sbjct: 242 LDTEMAEAIKREEIKEALRNPLKISRERVGAELDKMLLGKDPHYAFELIESLELHPLIF 300
>gi|443897598|dbj|GAC74938.1| tRNA nucleotidyltransferase [Pseudozyma antarctica T-34]
Length = 755
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 178/317 (56%), Gaps = 54/317 (17%)
Query: 97 RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS----ATGETAPSGF------ 146
R+AGGWVRDKLL +D D+DI+L + G+ FA + +LS AT A S +
Sbjct: 104 RIAGGWVRDKLLERDSDDLDISLSTLTGNAFALYLKHFLSSPSFATSSLAQSPYFREDGH 163
Query: 147 -----GVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYR 201
G I +NP+QSK+LETAT ++ L +DFVNLR E Y SRIPTM FGT +EDA R
Sbjct: 164 EMGRIGKIAANPEQSKNLETATARVLGLSLDFVNLRKETYDPGSRIPTMTFGTPKEDAER 223
Query: 202 RDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF 261
RD+TINSL YN+++ VED TG G+ DL G I TPLPP TFLDDPLRVLR +RF +RF
Sbjct: 224 RDITINSLLYNVHSRQVEDHTGLGLQDLASGLIRTPLPPLTTFLDDPLRVLRCVRFASRF 283
Query: 262 DFILDEELKK---------------AAASD----------------EVKAALAAKISRER 290
+ L + + A+A D +++ AL +K+SRER
Sbjct: 284 AYELHPAIIRCLTAAGDAETGAVHLASADDPRVSSGNSAGVELGRNQIRDALVSKVSRER 343
Query: 291 VGTEIDLMVSGNQPVKAMTHICGLTLFWIVF-------KLPLQVEPEV-LEGCEMFCTAY 342
G E+D M+ G P+ A+ + L LF +VF KL + EP + EG +
Sbjct: 344 FGIEVDKMLKGPNPLLALFLLHRLELFPLVFHPQPSAGKLWVASEPPLRQEGAPLADAVA 403
Query: 343 LDAAWDLTQLIGSSTFN 359
L+AA L ++ ST +
Sbjct: 404 LNAARLLDAILKQSTLD 420
>gi|405118525|gb|AFR93299.1| tRNA adenylyltransferase [Cryptococcus neoformans var. grubii H99]
Length = 510
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 191/344 (55%), Gaps = 20/344 (5%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
+ L+ E + L + + R+AGGWVRDKLL D+DIAL G FA
Sbjct: 28 VALSPAEATFVALLDDFANRLSPPVECRIAGGWVRDKLLSLPSSDLDIALSIPSGHSFAV 87
Query: 130 KVAEYLSATGETAPSG-FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
++L A + P+G G + +NP+QSKHLET T ++ L DFV LR E Y++ SRIP
Sbjct: 88 AFVDFLKA--KDVPTGSVGKVVANPEQSKHLETGTTRIMGLECDFVGLRSETYAD-SRIP 144
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
++ GT EDA RRDLTIN+LFYN++T VED T G++DL++ TPLPP+ TF DDP
Sbjct: 145 QVKPGTPFEDASRRDLTINALFYNVHTRQVEDYTKMGLSDLENRIARTPLPPRQTFQDDP 204
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LR++R +RF +RF+ + EE+ + ++VKA + +K+S+ER+G E M+ N P A+
Sbjct: 205 LRIVRCVRFASRFNLAIAEEVVDSIKQEDVKAGILSKVSKERIGIETTKMLH-NNPFHAL 263
Query: 309 THICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQY 368
+ I L L +F +V+P + F A + L Q+ + ++ +
Sbjct: 264 SLINSLDLHPYIFS--CEVDPPRQDA---FAAAQI-----LNQIAKRKSVDE----VLWL 309
Query: 369 AALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNI 412
A +PFR T K KG+ +P + + LK +V N+
Sbjct: 310 ATAAVPFRGLTVK-RKGRDVPASSVVIGEGLKLSTELKTSVTNL 352
>gi|258566840|ref|XP_002584164.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905610|gb|EEP80011.1| predicted protein [Uncinocarpus reesii 1704]
Length = 421
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 154/272 (56%), Gaps = 39/272 (14%)
Query: 62 VVVQVRDKIELTDTETKIFSCLLNTLRHFNL------------ETVLRVAGGWVRDKLLG 109
V + +ELT E + LL+ + + E VLR GGWVRDKLLG
Sbjct: 7 VAAETAPAVELTRIEKTLRHLLLDVVEYIKQKGVRNGNESAAGELVLRFTGGWVRDKLLG 66
Query: 110 KDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDL 169
+ +DID A F + P++SKHLET K++ L
Sbjct: 67 VESHDIDAA---------------------------FTRLKQIPEKSKHLETVATKIFGL 99
Query: 170 WIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADL 229
+D VNLR E YS++SR P M FGTAEEDA RRD T+N+LFYN++TSS+ED TGRGIADL
Sbjct: 100 EVDLVNLRKETYSDHSRHPEMEFGTAEEDALRRDATLNALFYNLHTSSIEDFTGRGIADL 159
Query: 230 KHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRE 289
I TPL P TF DDPLRVLR IRF +R + + + A D++K+AL KIS+E
Sbjct: 160 NSQLIRTPLQPYQTFKDDPLRVLRLIRFSSRLGYRIHPLTEDAMQHDDIKSALKLKISQE 219
Query: 290 RVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
R+G E++ M+ G P++A+ I L L+ +F
Sbjct: 220 RIGAEVEKMLKGPDPLRALHIIDRLKLYDTIF 251
>gi|58262928|ref|XP_568874.1| tRNA adenylyltransferase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57223524|gb|AAW41567.1| tRNA adenylyltransferase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 504
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 190/349 (54%), Gaps = 30/349 (8%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
+ L+ E + L + + R+AGGWVRDKLL D+DIAL G FA
Sbjct: 28 VTLSPAEATFVALLDDFANRLSPPVECRIAGGWVRDKLLSLPSSDLDIALSIPSGHSFAV 87
Query: 130 KVAEYLSATGETAPSG-FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
++L A + P+G G + +NP+QSKHLET T ++ L DFV LR E Y+ +SRIP
Sbjct: 88 AFVDFLKA--KDVPTGSVGKVVANPEQSKHLETGTTRIMGLECDFVGLRSETYA-DSRIP 144
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
++ GT EDA RRDLTIN+LFYN++T VED T G++DL++ TPLPP+ TF DDP
Sbjct: 145 QVKPGTPFEDASRRDLTINALFYNVHTRQVEDYTKMGLSDLENRIARTPLPPRQTFQDDP 204
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LR++R +RF +RF+ + +E+ + ++VK + +K+S+ER+G E M+ N P A+
Sbjct: 205 LRIVRCVRFASRFNLAIAQEVVDSIKQEDVKVGILSKVSKERIGIETIKMLH-NNPFHAL 263
Query: 309 THICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQY 368
+ I L L +F +V+P E F A + N+ +R S
Sbjct: 264 SLIHSLDLHPYIFS--CEVDPPRQEA---FAAAQI--------------LNEVAKRKSVD 304
Query: 369 AALFL-----PFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNI 412
L+L PFR T K KG+ +P + + LK ++ +NI
Sbjct: 305 EVLWLATAATPFRGLTVK-RKGRDVPASSVVIGEGLKTSVTNLFDAVNI 352
>gi|440466156|gb|ELQ35438.1| poly(A) polymerase [Magnaporthe oryzae Y34]
gi|440480673|gb|ELQ61326.1| poly(A) polymerase [Magnaporthe oryzae P131]
Length = 535
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 105/213 (49%), Positives = 137/213 (64%), Gaps = 9/213 (4%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFG------- 147
LR AGGWVRDKLLG + +DID+A+ M G F ++ + + G
Sbjct: 64 ALRWAGGWVRDKLLGTESHDIDVAISCMTGEAFTRELVAFCNDAANRDRHGISEGDIGNL 123
Query: 148 -VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTI 206
+ +NPD+SKHLET T +++ L +DFVNLR E Y+E+SR P M FGTAEEDA RRD T+
Sbjct: 124 HKVAANPDKSKHLETVTTRMFGLEVDFVNLRKETYTEDSRNPQMEFGTAEEDALRRDATV 183
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
N+LFYNI+TS VED G G+ D+ I TPL P TF DDPLRVLR +RF +R F +D
Sbjct: 184 NALFYNIHTSEVEDFVG-GLRDMDQKLIRTPLEPLQTFKDDPLRVLRLVRFASRLGFTID 242
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
+K ++ +V AL KISRERVG E++ M+
Sbjct: 243 PSAEKTMSAPDVLEALRLKISRERVGVEVEKML 275
>gi|134108198|ref|XP_777050.1| hypothetical protein CNBB2820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259735|gb|EAL22403.1| hypothetical protein CNBB2820 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 504
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/352 (36%), Positives = 192/352 (54%), Gaps = 33/352 (9%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
+ L+ E + L + + R+AGGWVRDKLL D+DIAL G FA
Sbjct: 28 VTLSPAEATFVALLDDFANRLSPPVECRIAGGWVRDKLLSLPSSDLDIALSIPSGHSFAV 87
Query: 130 KVAEYLSATGETAPSG-FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP 188
++L A + P+G G + +NP+QSKHLET T ++ L DFV LR E Y+ +SRIP
Sbjct: 88 AFVDFLKA--KDVPTGSVGKVVANPEQSKHLETGTTRIMGLECDFVGLRSETYA-DSRIP 144
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
++ GT EDA RRDLTIN+LFYN++T VED T G++DL++ TPLPP+ TF DDP
Sbjct: 145 QVKPGTPFEDASRRDLTINALFYNVHTRQVEDYTKMGLSDLENRIARTPLPPRQTFQDDP 204
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LR++R +RF +RF+ + +E+ + ++VK + +K+S+ER+G E M+ N P A+
Sbjct: 205 LRIVRCVRFASRFNLAIAQEVVDSIKQEDVKVGILSKVSKERIGIETIKMLH-NNPFHAL 263
Query: 309 THICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQY 368
+ I L L +F +V+P E F A + N+ +R S
Sbjct: 264 SLIHSLDLHPYIFS--CEVDPPRQEA---FAAAQI--------------LNEVAKRKSVD 304
Query: 369 AALFL-----PFRNTTYKDNKGKKIPVVNYTFRDSLKRKAS---DAETVMNI 412
L+L PFR T K KG+ +P + + LK + DA ++N+
Sbjct: 305 EVLWLATAATPFRGLTVK-RKGRDVPASSVVIGEGLKTSVTNLFDAVDIINL 355
>gi|401412009|ref|XP_003885452.1| hypothetical protein NCLIV_058470 [Neospora caninum Liverpool]
gi|325119871|emb|CBZ55424.1| hypothetical protein NCLIV_058470 [Neospora caninum Liverpool]
Length = 768
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/227 (49%), Positives = 147/227 (64%), Gaps = 3/227 (1%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSA 137
++F L+ + L VLR AGGWVRDKL+ + DIDIA+D G EFAT + +L A
Sbjct: 25 RLFDMLVRCVEDLKLNIVLRAAGGWVRDKLMKRRSDDIDIAIDKCTGVEFATNLNSWLRA 84
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP-TMRFGTAE 196
G GV+ SNPDQSKHLETAT +L + +DFV+LR E YSE+SRIP + FGT E
Sbjct: 85 QG-LPTHAIGVVASNPDQSKHLETATCRLANHQVDFVHLRTETYSEHSRIPENVGFGTPE 143
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP-PKATFLDDPLRVLRAI 255
EDA RRD T+N+LFYN++T VE+ T G+ DL+ + TPL K T LDDPLRVLR +
Sbjct: 144 EDAQRRDFTLNALFYNLHTKKVENFTKTGLEDLRRRVLRTPLENAKETLLDDPLRVLRGV 203
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN 302
R A L +E+ K A + V+ L K+SRER+G E+ M+SG+
Sbjct: 204 RLAALLRLQLHDEVVKGAQTRAVREGLRKKVSRERLGIELKKMLSGS 250
>gi|164659020|ref|XP_001730635.1| hypothetical protein MGL_2431 [Malassezia globosa CBS 7966]
gi|159104531|gb|EDP43421.1| hypothetical protein MGL_2431 [Malassezia globosa CBS 7966]
Length = 592
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 107/259 (41%), Positives = 155/259 (59%), Gaps = 31/259 (11%)
Query: 97 RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT---------------GET 141
R+AGGWVRDKLLG +D+D++L ++ G +FA + YL +
Sbjct: 41 RIAGGWVRDKLLGLPSHDLDVSLSSLTGHQFALFLKAYLESDRFSQTKLAHEIAMHLPHR 100
Query: 142 APSG-FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
P G G I +NP+QSK+LETAT + +DFVNLR E Y RIP M FGT +DA
Sbjct: 101 GPMGTIGKIAANPEQSKNLETATTNVLGFDLDFVNLRKEVYEGTHRIPVMSFGTPLDDAM 160
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD+T+N+LFYN++T+S+ED T G+ DL HG + TP+ P +TF DDPLR+LR +RF +R
Sbjct: 161 RRDITVNALFYNVHTASIEDWTEHGLHDLHHGIVRTPMDPASTFNDDPLRILRCVRFSSR 220
Query: 261 FDFILDEEL---------------KKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
F + + ++ K + ++ +++AL K+SRER G E+D M+SG P
Sbjct: 221 FGYEIHSDIRSCLCETASDGGSKAKNPSTAELLRSALLNKVSRERFGIEVDKMLSGRDPF 280
Query: 306 KAMTHICGLTLFWIVFKLP 324
+A+ + L L+ +VF P
Sbjct: 281 RALQLLSELGLYKVVFTPP 299
>gi|406698335|gb|EKD01573.1| tRNA adenylyltransferase [Trichosporon asahii var. asahii CBS 8904]
Length = 489
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 185/347 (53%), Gaps = 20/347 (5%)
Query: 67 RDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSE 126
+ I L+DTE K + L +N R+AGGW LL +D+D+AL G
Sbjct: 10 KGTIALSDTEEKFVTLLDEFATGYNPPIECRIAGGW----LLSLPSHDLDVALSTASGYA 65
Query: 127 FATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSR 186
FA +L G S G I +NP+QSKHLET T ++ L DFV LR E Y+ ++R
Sbjct: 66 FAEAFHNFLKERGVDIGS-LGRIEANPEQSKHLETGTTRIMGLECDFVGLRSETYT-DTR 123
Query: 187 IPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIV-TPLPPKATFL 245
IP ++ GT EDA RRDLT NSLF+N+++ +ED T G+ADL+ G+I TPLPP+ TFL
Sbjct: 124 IPQIKLGTPLEDALRRDLTCNSLFFNVHSREIEDWTRHGLADLE-GRIARTPLPPRQTFL 182
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
DDPLRVLR +RF RF ++ ++ A +++ AL K+S+ERVG E M+ P+
Sbjct: 183 DDPLRVLRCVRFAGRFGLKIEPDVSAAMKETDIQDALRTKVSKERVGEETHKMMQ-KTPL 241
Query: 306 KAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRL 365
+A I L L +F P VEPE + L T GS
Sbjct: 242 RAYELIYELGLHKAIFTGP--VEPENPREQALAAAQVLTEVLKRTGEQGSDAL------- 292
Query: 366 SQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNI 412
+AA PFR T ++ KGK + V +S+KR A ++ V ++
Sbjct: 293 -WFAAGCSPFRGMT-REEKGKTVSCVATVMLESVKRSADLSKHVAHL 337
>gi|401886388|gb|EJT50426.1| tRNA adenylyltransferase [Trichosporon asahii var. asahii CBS 2479]
Length = 489
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 185/347 (53%), Gaps = 20/347 (5%)
Query: 67 RDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSE 126
+ I L+DTE K + L +N R+AGGW LL +D+D+AL G
Sbjct: 10 KGTIALSDTEEKFVTLLDEFATGYNPPIECRIAGGW----LLSLPSHDLDVALSTASGYA 65
Query: 127 FATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSR 186
FA +L G S G I +NP+QSKHLET T ++ L DFV LR E Y+ ++R
Sbjct: 66 FAEAFHNFLKERGVDIGS-LGRIEANPEQSKHLETGTTRIMGLECDFVGLRSETYT-DTR 123
Query: 187 IPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIV-TPLPPKATFL 245
IP ++ GT EDA RRDLT NSLF+N+++ +ED T G+ADL+ G+I TPLPP+ TFL
Sbjct: 124 IPQIKLGTPLEDALRRDLTCNSLFFNVHSREIEDWTRHGLADLE-GRIARTPLPPRQTFL 182
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
DDPLRVLR +RF RF ++ ++ A +++ AL K+S+ERVG E M+ P+
Sbjct: 183 DDPLRVLRCVRFAGRFGLKIEPDVSAAMKETDIQDALRTKVSKERVGEETHKMMQ-KTPL 241
Query: 306 KAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRL 365
+A I L L +F P VEPE + L T GS
Sbjct: 242 RAYELIYELGLHKAIFTGP--VEPENPREQALAAAQVLTEVLKRTGGQGSDAL------- 292
Query: 366 SQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNI 412
+AA PFR T ++ KGK + V +S+KR A ++ V ++
Sbjct: 293 -WFAAGCSPFRGMT-REEKGKTVSCVATVMLESVKRSADLSKHVAHL 337
>gi|302764534|ref|XP_002965688.1| hypothetical protein SELMODRAFT_407286 [Selaginella moellendorffii]
gi|300166502|gb|EFJ33108.1| hypothetical protein SELMODRAFT_407286 [Selaginella moellendorffii]
Length = 427
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 167/308 (54%), Gaps = 43/308 (13%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I LT E KI L +R +L+ +LLG + +D+DIALD+M G +F
Sbjct: 4 IVLTREEAKILDALRLVIRECDLKI-----------ELLGVESHDLDIALDDMTGQQFCD 52
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
+V L T + VI SNP++SKHLET +++ +D
Sbjct: 53 RVLPCLRKTDPLC--SYKVIKSNPERSKHLETTKLEILGGELD----------------- 93
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
+FGT EDAY RDLTINSLFYN+ VED TGRG+ DLK GKI TPLPP TFLDDPL
Sbjct: 94 -KFGTPSEDAYGRDLTINSLFYNVAADKVEDFTGRGVMDLKLGKIRTPLPPLVTFLDDPL 152
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
RVLR+IRF ARF+F LDEEL+ A+ D VKAA KI+RER+ EI M+ G P +AM
Sbjct: 153 RVLRSIRFAARFNFELDEELECVASVDSVKAAFETKITRERISQEIQAMLFGKNPARAMC 212
Query: 310 HICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYA 369
+ L + ++F P V + ++ ++ C L + + +RRL A
Sbjct: 213 LLHKLGYWPLIFTRP--VSAQSVKDFQVVCET----------LESVNIPEEGERRLVLVA 260
Query: 370 ALFLPFRN 377
+ PF+
Sbjct: 261 GILYPFKK 268
>gi|221056136|ref|XP_002259206.1| tRNA nucleotidyltransferase [Plasmodium knowlesi strain H]
gi|193809277|emb|CAQ39979.1| tRNA nucleotidyltransferase, putative [Plasmodium knowlesi strain
H]
Length = 771
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 140/217 (64%), Gaps = 1/217 (0%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT 138
+F+ L + L++ LRV GGWVRDK LG DID+ +DNM GSEF + EY+
Sbjct: 168 LFAFLQKVNETYKLQSTLRVVGGWVRDKFLGISNDDIDVTVDNMKGSEFCNYIKEYIKEK 227
Query: 139 GETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEED 198
E FG+I N DQSKHLET++ L++ +D VNLR E Y+E SRIP + GT EED
Sbjct: 228 -EKKNFNFGIIKINSDQSKHLETSSFHLFNFQVDIVNLRNEKYTEESRIPEIVIGTPEED 286
Query: 199 AYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFG 258
A RRD T+N+LFYN+++ VED T RGI LK+ I TPL P TFLDDPLR++R IRF
Sbjct: 287 ALRRDFTVNALFYNLSSRRVEDYTKRGILHLKNKVICTPLDPYTTFLDDPLRIIRCIRFC 346
Query: 259 ARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
F+F++++ + ++ + A KISR R+ TEI
Sbjct: 347 GVFNFLVEKSIFDVLKNEHIMKAFKKKISRSRLSTEI 383
>gi|397615380|gb|EJK63394.1| hypothetical protein THAOC_15946, partial [Thalassiosira oceanica]
Length = 1026
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 192/392 (48%), Gaps = 70/392 (17%)
Query: 146 FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCED-YSENSRIPTMR---FGTAEEDAYR 201
GVI +NP QSKHLETATM ++ IDFVNLR E+ Y +SRIPT + FG+ EDA R
Sbjct: 523 IGVIGANPSQSKHLETATMNIHGCDIDFVNLRAEEVYELDSRIPTSKTRMFGSPLEDALR 582
Query: 202 RDLTINSLFYNINTSSVEDLTGRGIADL-KHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RD TINSLFYNI T +ED TGRG+ DL + KIVTP+ TF DDPLRVLRAIRF R
Sbjct: 583 RDFTINSLFYNIRTRRIEDWTGRGLTDLLETRKIVTPVDAHVTFHDDPLRVLRAIRFCVR 642
Query: 261 FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN--QPVKAMTHICGLTLFW 318
DF LDE+ ++AAAS V +L K+SRERVG E++ M++G +P +A+ I L L
Sbjct: 643 LDFALDEQTREAAASKRVHHSLHVKVSRERVGKEVEGMLTGKHARPGRALGMIADLKLAG 702
Query: 319 IVFKLPLQ-----------VEPEVL-----------------------EGCEMFCTAYLD 344
VF P V E+L EG +
Sbjct: 703 SVFAFPGSFPGDSNYAGGPVTGELLGQPYNCSLGSNGQVENMEDRLHREGAVEVASKQRK 762
Query: 345 AAWDLTQLI---------GSSTFNDDQRRLS-------------QYAALFLPFRNTTYKD 382
A W++ Q++ G + ++ RLS PF + ++ D
Sbjct: 763 AGWNVGQMLLGVLPNVMEGHAHEREELSRLSGSFVNTPVDARLLHLCVFIAPFHDLSFPD 822
Query: 383 NKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKE 442
KG+ + V + +D+LK D + V ++L F + L G+ +
Sbjct: 823 KKGRDVKVTTHMIKDALKFSVRDGQAVA---KILSHFDEISDVLGDIRRQLALGGEANSA 879
Query: 443 LVDVPDASKLRVLTGFLLREIKKFWRVALLIS 474
+ P R+ G LLR +K+ W LL +
Sbjct: 880 GLKAP----CRLKIGLLLRSLKENWVTCLLTA 907
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 93 ETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
+ LRVAGGWVRDKLL + D+D+ALD MMG +FA V Y+S
Sbjct: 410 QICLRVAGGWVRDKLLKQHSMDVDVALDCMMGVQFARIVQSYMS 453
>gi|429962880|gb|ELA42424.1| hypothetical protein VICG_00523 [Vittaforma corneae ATCC 50505]
Length = 452
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 147/232 (63%), Gaps = 6/232 (2%)
Query: 97 RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
R+AGG+VRDK++ C+DID+ALDN+ G FAT +A L P+ + ++ +NP++S
Sbjct: 29 RLAGGFVRDKIMEVVCHDIDVALDNISGLLFATGLANKLV----NHPTVYKIL-ANPEKS 83
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
KHLETA + LY IDFV+LR E Y++ +RIPT++ GT EEDA+RRD+TINSLFYN+ T
Sbjct: 84 KHLETAVLNLYGYSIDFVHLRSESYTQ-TRIPTIQKGTPEEDAFRRDITINSLFYNLITG 142
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
+ED TGRGI D+ + I TPL P+ T LDDPLR+LR RF ++ F + + + A
Sbjct: 143 EIEDFTGRGIHDIHNKVIDTPLDPRTTLLDDPLRILRIFRFKSKLGFKISKRIYDALEDR 202
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVE 328
+ AL K+S ER G EI M+ + I L + VFK +E
Sbjct: 203 SLGLALEKKVSNERNGIEIMKMLQYENGEDGLIEIINNELVFSVFKPKTSIE 254
>gi|221487856|gb|EEE26088.1| poly(A) polymerase, putative [Toxoplasma gondii GT1]
Length = 735
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 144/225 (64%), Gaps = 3/225 (1%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSA 137
++F L+ + L VLR AGGWVRDKL+ + DIDIA+D G EFAT + ++L A
Sbjct: 25 RLFDMLVRCVEDLKLNVVLRAAGGWVRDKLMNRRSDDIDIAIDKCTGVEFATNLNKWLRA 84
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP-TMRFGTAE 196
G GV+ SNPDQSKHLETAT +L +DFV+LR E YSE+SRIP + FGT
Sbjct: 85 QG-LPTHAIGVVASNPDQSKHLETATCRLAHHQVDFVHLRTETYSEHSRIPENIGFGTPA 143
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP-PKATFLDDPLRVLRAI 255
EDA+RRD T+N+LFYN++T VE+ T G+ DL+ + TPL + T LDDPLRVLR +
Sbjct: 144 EDAHRRDFTLNALFYNLHTKKVENFTKTGLEDLRRRVLRTPLENARETLLDDPLRVLRGV 203
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVS 300
R A L EE+ A + V+ L K+SRER+G E+ M+S
Sbjct: 204 RLAALLRLQLHEEVVTGAQTKAVREGLKKKVSRERLGIELKKMLS 248
>gi|237830923|ref|XP_002364759.1| tRNA nucleotidyltransferase, putative [Toxoplasma gondii ME49]
gi|211962423|gb|EEA97618.1| tRNA nucleotidyltransferase, putative [Toxoplasma gondii ME49]
gi|221507642|gb|EEE33246.1| poly(A) polymerase, putative [Toxoplasma gondii VEG]
Length = 735
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 144/225 (64%), Gaps = 3/225 (1%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSA 137
++F L+ + L VLR AGGWVRDKL+ + DIDIA+D G EFAT + ++L A
Sbjct: 25 RLFDMLVRCVEDLKLNVVLRAAGGWVRDKLMNRRSDDIDIAIDKCTGVEFATNLNKWLRA 84
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP-TMRFGTAE 196
G GV+ SNPDQSKHLETAT +L +DFV+LR E YSE+SRIP + FGT
Sbjct: 85 QG-LPTHAIGVVASNPDQSKHLETATCRLAHHQVDFVHLRTETYSEHSRIPENIGFGTPA 143
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP-PKATFLDDPLRVLRAI 255
EDA+RRD T+N+LFYN++T VE+ T G+ DL+ + TPL + T LDDPLRVLR +
Sbjct: 144 EDAHRRDFTLNALFYNLHTKKVENFTKTGLEDLRRRVLRTPLENARETLLDDPLRVLRGV 203
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVS 300
R A L EE+ A + V+ L K+SRER+G E+ M+S
Sbjct: 204 RLAALLRLQLHEEVVTGAQTKAVREGLKKKVSRERLGIELKKMLS 248
>gi|68011085|ref|XP_670997.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56486772|emb|CAH99245.1| conserved hypothetical protein [Plasmodium berghei]
Length = 271
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 124/198 (62%), Gaps = 1/198 (0%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
+T E ++F L+ + L T LRV GGWVRDK L DIDI +DNM GS+F +
Sbjct: 66 ITHRELELFEFLMKINETYKLNTTLRVVGGWVRDKFLNISNDDIDITVDNMKGSDFCNYI 125
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
EY+ E FG+I N DQSKHLET++ L++ +D VNLR E Y+E SRIP +
Sbjct: 126 KEYIKDK-ENKNFNFGIIKINCDQSKHLETSSFNLFNFQVDIVNLRNEKYTEESRIPEIS 184
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
GT EEDA RRD TINSLFYN+ VED T GI L++ I TPL P TFLDDPLR+
Sbjct: 185 IGTVEEDALRRDFTINSLFYNLKNKKVEDYTKNGIYHLRNKIISTPLNPLTTFLDDPLRI 244
Query: 252 LRAIRFGARFDFILDEEL 269
+R IR FDF LD+ +
Sbjct: 245 IRCIRVCGYFDFNLDQSI 262
>gi|281205388|gb|EFA79580.1| tRNA ADENILYL transferase [Polysphondylium pallidum PN500]
Length = 496
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 159/272 (58%), Gaps = 13/272 (4%)
Query: 62 VVVQVRDKI--ELTDTETKIFSCLLNTLRHFNLE--TVLRVAGGWVRDKLLGKDC----- 112
V+V+V ++I L D E + F + +H NL+ LRV+GGWVR+KLL D
Sbjct: 75 VIVEVSNRIISSLNDQEKRYFELFKSVAKHNNLQDKVELRVSGGWVRNKLLSIDSSSSGY 134
Query: 113 YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWID 172
+DIDIA+ + G EF + Y G + ++ NPD+SKHLETA++ + D
Sbjct: 135 FDIDIAISGITGREFVDLIEHYRIEHGLSQKKY--LVRRNPDKSKHLETASIVIDGYTFD 192
Query: 173 FVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHG 232
F LR E Y ++RIP + GT DA+RRD+TINSL++N+ T VED TG GI DL +
Sbjct: 193 FTGLRAEQYDTHTRIPQIVDGTPTTDAFRRDITINSLYFNLETYRVEDFTGNGIDDLCNK 252
Query: 233 KIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVG 292
I TPL P T ++DPLR LR +RF RF F +D L ++ S EV++AL K+S+ER+
Sbjct: 253 YIRTPLSPHITLIEDPLRALRVLRFATRFHFNIDPSLYRSIESIEVRSALGYKVSKERIK 312
Query: 293 TEIDLMVSG--NQPVKAMTHICGLTLFWIVFK 322
E LM+S + ++ ++ L +VF+
Sbjct: 313 NEFSLMMSSYDSGAIQYFRYLVDTNLVDVVFQ 344
>gi|328873083|gb|EGG21450.1| tRNA ADENILYL transferase [Dictyostelium fasciculatum]
Length = 582
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 149/233 (63%), Gaps = 4/233 (1%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETV-LRVAGGWVRDKLLG-KDCYDIDIALDNMMGSEF 127
++LT E F+ + L +F + V LRVAGGWVR+KLLG + DIDIA+DN+ G EF
Sbjct: 110 LDLTADEKYYFNLFRDVLIYFKRQDVQLRVAGGWVRNKLLGIQGGTDIDIAIDNLTGHEF 169
Query: 128 ATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYD-LWIDFVNLRCEDYSENSR 186
+ +Y S + + +I SNP++SKHLETA++ + D L DF LR E+Y E SR
Sbjct: 170 VQMIQKYYSINNQILFRNY-IIKSNPEKSKHLETASLVMKDGLTFDFTGLRSEEYDEFSR 228
Query: 187 IPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLD 246
IP + GT D++RRD+TINSL+YN+ T+ VED T G+ DL++ + TPL P T +
Sbjct: 229 IPNIVKGTLISDSHRRDITINSLYYNLMTTRVEDYTLMGLPDLENKIVRTPLSPTLTLCE 288
Query: 247 DPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
DPLR LR +RF RF F ++ +L ++ SD V+ L K+SRERV TE M+
Sbjct: 289 DPLRALRVLRFSNRFSFSIESQLYESLCSDRVRDLLGLKVSRERVHTEFTSMM 341
>gi|393247736|gb|EJD55243.1| transfer RNA nucleotidyltransferase [Auricularia delicata TFB-10046
SS5]
Length = 482
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 134/205 (65%), Gaps = 1/205 (0%)
Query: 123 MGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYS 182
MG FA K A +L G S I N SKHLE A + L I+FVNLR E+Y+
Sbjct: 1 MGYPFAVKFASFLQRKGVQV-SSVHKIDMNAAMSKHLEPALLTLLGRKIEFVNLRSEEYT 59
Query: 183 ENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKA 242
+SRIP + FGT +DA RRD TINSLFYN++T SVED T +GI DL+ G I TPL +
Sbjct: 60 ASSRIPQIEFGTPLQDALRRDTTINSLFYNVHTRSVEDQTDKGIPDLEAGIIRTPLAARE 119
Query: 243 TFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN 302
TFLDDPLRVLR IRF +R F LD++++ AAA E++ AL K+SRERVG E++ M+SG
Sbjct: 120 TFLDDPLRVLRCIRFSSRLGFALDQDVRAAAADSEIQQALMVKVSRERVGVEVEKMISGR 179
Query: 303 QPVKAMTHICGLTLFWIVFKLPLQV 327
P A++ I L+L+ +F +P +
Sbjct: 180 DPATAVSLIHDLSLYNTIFTIPPSI 204
>gi|213405453|ref|XP_002173498.1| tRNA nucleotidyltransferase [Schizosaccharomyces japonicus yFS275]
gi|212001545|gb|EEB07205.1| tRNA nucleotidyltransferase [Schizosaccharomyces japonicus yFS275]
Length = 492
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 179/339 (52%), Gaps = 13/339 (3%)
Query: 70 IELTDTETKIFSCLLNTLRHF--NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEF 127
+ L DTE KI + L R N LR+AGGWVRDKLL C+DID+A+D M G EF
Sbjct: 13 VALDDTEIKICNLLDAVSRQCPENKTPTLRIAGGWVRDKLLSIPCHDIDVAVDCMSGFEF 72
Query: 128 ATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRI 187
A V Y I +NP +SKHLETAT +L+ + +DFV LR Y+ +S
Sbjct: 73 AQLVHRYCEQNNIQNSGRVVRIDANPSKSKHLETATGRLFGIDVDFVGLRSHAYTHHSE- 131
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDD 247
+FGT EDA RRD TINSLFYNI+T SVED T G+ DL+ I TPLP TF DD
Sbjct: 132 -ENKFGTPLEDALRRDTTINSLFYNIHTRSVEDFTEMGLEDLEKKVIQTPLPAMETFSDD 190
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
LR +R IRF ++F F + E + + V+ L ISRER+GTE++ M+ A
Sbjct: 191 ALRAVRCIRFASKFQFSIHPETQAGIQNPAVQHTLLHSISRERIGTEVEKMLKNKNAKLA 250
Query: 308 MTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDL-TQLIGS----STFNDDQ 362
+ L + +F PL L+G + + +A L QLI S + D
Sbjct: 251 VDLSYQLHIADAIFG-PLPDVQSKLQGTKSATNIDIFSATSLFQQLIVSDPAYKNLSVDD 309
Query: 363 RRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTF-RDSLK 400
+ A FLP+R T +GK+ + Y ++SLK
Sbjct: 310 IYMMWLAIAFLPWRYVTLA--QGKQYKTLPYFLAKESLK 346
>gi|146416643|ref|XP_001484291.1| hypothetical protein PGUG_03672 [Meyerozyma guilliermondii ATCC
6260]
Length = 452
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 123/175 (70%)
Query: 149 IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINS 208
I NPD+SKHLET T KL+ L IDFVNLR E Y+ +SR+P + GTAEEDA RRD T+N+
Sbjct: 9 IKKNPDKSKHLETCTTKLFGLDIDFVNLRSEKYTADSRVPVIECGTAEEDALRRDATLNA 68
Query: 209 LFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
LFYN+N +ED TG+G+ DL++G + TPL P TFLDDPLRVLR IRF + FDF ++
Sbjct: 69 LFYNLNQDKIEDFTGKGLDDLRNGILRTPLAPYQTFLDDPLRVLRLIRFSSTFDFQIESN 128
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
+A +DE+K AL KISRERVG E+D ++ GN P+ + I + L +F +
Sbjct: 129 TIEAMTTDEIKQALIHKISRERVGVELDKILMGNNPIYGLRLISHVGLTNSIFNV 183
>gi|390604087|gb|EIN13478.1| poly A polymerase C-terminal region-like protein [Punctularia
strigosozonata HHB-11173 SS5]
Length = 502
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 195/384 (50%), Gaps = 51/384 (13%)
Query: 123 MGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMK-LYDLWIDFVNLRCEDY 181
MG FA K+ +L+ ++ SNP QSKHLETA + + +D VNLR E+Y
Sbjct: 1 MGVPFAEKLLTFLAEEKGMDDIKLSIVKSNPGQSKHLETAKVNPILGFELDLVNLRSEEY 60
Query: 182 SENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPP 240
+ +SRIPT + FGT +DA RRD+TINSLFYN+++ SVED TG+G+ DL++G + TPLPP
Sbjct: 61 AIDSRIPTEVTFGTPLQDALRRDITINSLFYNVHSKSVEDHTGKGLHDLRNGVVRTPLPP 120
Query: 241 KATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVS 300
+ TFLDDPLRVLR +RF +RF F + EL +A E++ A +KI+RERVG E+ M+
Sbjct: 121 RETFLDDPLRVLRCVRFASRFGFDMVPELVASAKDPEIQTAFRSKITRERVGEEVHKMMK 180
Query: 301 GNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAY---------LDAAWDLTQ 351
G P+ ++ + L+L ++F +P + + TA +DA + +
Sbjct: 181 GRHPLLSIQLMDELSLPPLIFDVPASISSTFSSQPAPYHTALAASSVLHLIIDAPTEPSS 240
Query: 352 -----------LIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLK 400
L G T + Q RL A P+R T+ D K + P R+ L+
Sbjct: 241 SVSLPPVHSELLSGIRTDSTAQSRL-YLACAVTPYRGITFTDAKKRIHPACEAALREGLR 299
Query: 401 RKASDAETVMNIHRVLEKFLSLIPSLVSAEDV---KVNDGQWSKELVDVPDASKLRVLTG 457
+ +L IP+L A ++ V Q ++ D++ R G
Sbjct: 300 VGTQN------------HYLDGIPALFGAWEILRGPVGGDQATQ------DSNNERARIG 341
Query: 458 FLLRE-------IKKFWRVALLIS 474
LLRE W +LL S
Sbjct: 342 LLLREKTVHNPHTGSHWATSLLFS 365
>gi|190347325|gb|EDK39574.2| hypothetical protein PGUG_03672 [Meyerozyma guilliermondii ATCC
6260]
Length = 452
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 123/175 (70%)
Query: 149 IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINS 208
I NPD+SKHLET T KL+ L IDFVNLR E Y+ +SR+P + GTAEEDA RRD T+N+
Sbjct: 9 IKKNPDKSKHLETCTTKLFGLDIDFVNLRSEKYTADSRVPVIECGTAEEDALRRDATLNA 68
Query: 209 LFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
LFYN+N +ED TG+G+ DL++G + TPL P TFLDDPLRVLR IRF + FDF ++
Sbjct: 69 LFYNLNQDKIEDFTGKGLDDLRNGILRTPLAPYQTFLDDPLRVLRLIRFSSTFDFQIESN 128
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
+A +DE+K AL KISRERVG E+D ++ GN P+ + I + L +F +
Sbjct: 129 TIEAMTTDEIKQALIHKISRERVGVELDKILMGNNPIYGLRLISHVGLTNSIFNV 183
>gi|403168850|ref|XP_003328442.2| hypothetical protein PGTG_09736 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167687|gb|EFP84023.2| hypothetical protein PGTG_09736 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 300
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 161/290 (55%), Gaps = 45/290 (15%)
Query: 32 FRNIFTVNT-TRNLGFL--RCKATMSEQEPPRPVVVQVR--------DKIELTDTETKIF 80
RN F +R +G L R +T +P + ++ R +IEL E+K+
Sbjct: 6 LRNYFDQQGLSRLMGCLKRRTTSTTDHNQPNQKRLLVSRMTMRIKKDQEIELNRAESKLC 65
Query: 81 SCLLNTLRHFNLET----------VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATK 130
L ++ H LR+AGGWVRDKLLG D+DIA+ ++ G +FAT+
Sbjct: 66 QLLNQSVSHLKASASSTNQDLNSLTLRIAGGWVRDKLLGVQSNDLDIAISSLTGQDFATR 125
Query: 131 VAEYL-----------SATGETAPSGFG-----------VIPSNPDQSKHLETATMKLYD 168
+ YL S T +G G I + PDQSKHLETAT
Sbjct: 126 FSSYLRDQQRLKREGQSENQTTKEAGDGGEETFELGKIATIEARPDQSKHLETATTTFLG 185
Query: 169 LWIDFVNLRCEDYS-ENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGI 226
L +DFV LR E+Y ++SRIP+ +RFGT EDA RRD+TINSLFYN++T ++ED TG+G+
Sbjct: 186 LDLDFVQLRSEEYGDQDSRIPSSVRFGTPLEDALRRDITINSLFYNVHTGAIEDHTGKGL 245
Query: 227 ADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
DL+ G I TPLP + TF DDPLR+LR IRF RF + LD ++ AA SD
Sbjct: 246 EDLEVGLIRTPLPAEHTFKDDPLRLLRCIRFATRFGYRLDADIVSAATSD 295
>gi|167524258|ref|XP_001746465.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775227|gb|EDQ88852.1| predicted protein [Monosiga brevicollis MX1]
Length = 322
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/236 (41%), Positives = 140/236 (59%), Gaps = 2/236 (0%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPD 154
V RVAGGWVRDK+L + DIDI LD + G +F +A + + + GF V+P
Sbjct: 11 VARVAGGWVRDKMLHRPSLDIDITLDVVTGRQFVAMIANLIEQE-KRSDVGFHVLP-EAS 68
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
QS HL+ AT L+ L IDF LR E Y SRIP + GT +ED+ RRD TIN+L+YNIN
Sbjct: 69 QSAHLQVATATLFGLEIDFNQLRKETYDPESRIPAVEIGTIQEDSDRRDFTINALYYNIN 128
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T ++ED GRG++DL+ G + + P F+DDPLR+LR R+ R+ F ++ AA
Sbjct: 129 TDAIEDFDGRGLSDLEAGIVRSFGNPTQRFMDDPLRLLRLARYAGRYCFQVEATTLAAAR 188
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPE 330
+ AL K+SRER G E+ + + + + H+ L LF ++F LP + P+
Sbjct: 189 QSTIHEALQTKVSRERFGMELLKLFKADNAMACLLHLAELQLFGVLFDLPPVLLPD 244
>gi|342183432|emb|CCC92912.1| putative tRNA nucleotidyltransferase [Trypanosoma congolense
IL3000]
Length = 525
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 153/252 (60%), Gaps = 12/252 (4%)
Query: 75 TETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDN-----MMGSEFAT 129
+ KIF LL N+ LRVAGGWVRD LLG DIDIA+++ + G FA
Sbjct: 16 SHLKIFEFLLRVNEERNINATLRVAGGWVRDSLLGLHSQDIDIAIESPTHMPVSGEAFAR 75
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE-NSRIP 188
+VA Y + G A + VI NP+ SKH+ETAT+ +YD ++F LR ++Y+ +SRIP
Sbjct: 76 EVASYQESLGLKART-VSVIRVNPELSKHIETATVCVYDTPVEFCALRHDEYTNPDSRIP 134
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
+R TA EDA RRD TIN+LFYN++T VED G+ DL H + PL P+ TF DDP
Sbjct: 135 AVRPATAMEDAMRRDYTINALFYNLHTKEVEDYVT-GLEDLAHRVLRCPLDPRETFSDDP 193
Query: 249 LRVLRAIRFGAR---FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
LR+LR IRF + F+LD E+ + D++ +A K+SRER+G E+ M+SG P
Sbjct: 194 LRLLRGIRFVGQLGELGFVLD-EVTLSCVDDDLLQKVAVKVSRERIGKEVAKMLSGPFPE 252
Query: 306 KAMTHICGLTLF 317
+ + + L++
Sbjct: 253 RCVEIMYKLSIL 264
>gi|380475395|emb|CCF45274.1| poly A polymerase head domain-containing protein, partial
[Colletotrichum higginsianum]
Length = 421
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 135/215 (62%), Gaps = 9/215 (4%)
Query: 122 MMGSEFATKVAEYLSATGETAPSGFGV--------IPSNPDQSKHLETATMKLYDLWIDF 173
M G F+ ++ +Y + T G I +NPD+SKHLETAT +++ L +DF
Sbjct: 1 MTGYAFSLELRDYCAQHAHTEKHNIGPDDMGSLHRIAANPDKSKHLETATTRMFGLDVDF 60
Query: 174 VNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGK 233
VNLR E Y+++SR PTM FGTAEEDA RRD TIN+LFYN++T VED TG G+AD++
Sbjct: 61 VNLRKETYTQDSRNPTMEFGTAEEDALRRDATINALFYNLHTGLVEDFTG-GLADMESRL 119
Query: 234 IVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGT 293
+ TP+ P TF DDPLRVLR +RF +R DF +D A V AL KISRERVG
Sbjct: 120 VRTPMEPFQTFTDDPLRVLRLVRFASRLDFSIDTAATAVMADARVLDALRLKISRERVGV 179
Query: 294 EIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVE 328
E++ M+ G++P ++ I L L+ +F P +E
Sbjct: 180 EMEKMLKGSRPRSSLDLIRTLGLYNAIFTDPNGME 214
>gi|340056211|emb|CCC50540.1| putative tRNA nucleotidyltransferase [Trypanosoma vivax Y486]
Length = 561
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 155/261 (59%), Gaps = 15/261 (5%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALD-----NMMGSE 126
+ D KIF LL N+ +LRVAGGWVRD LLG DIDIA++ ++ G
Sbjct: 48 VADAHQKIFDFLLRVNEERNVHAILRVAGGWVRDTLLGLHSQDIDIAIESPTARHVSGEF 107
Query: 127 FATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE-NS 185
FA ++A + + G A VI NP+ SKH+ETAT+ +YD I+ LR ++Y++ NS
Sbjct: 108 FAREIAAHQESLG-MASRSVSVIRVNPELSKHIETATICVYDTPIELCALRHDEYTQANS 166
Query: 186 RIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFL 245
RIP +R T EDA RRD T+N+LFYN++T VED T G+ DL+ + PL P+ TF
Sbjct: 167 RIPVVRPATPLEDALRRDYTVNALFYNLHTQEVEDYTT-GLVDLERRVLRCPLEPRETFC 225
Query: 246 DDPLRVLRAIRFGAR---FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG- 301
DDPLR+LR IRF + F LDE + + D ++ + AK+SRER+G E+ M+SG
Sbjct: 226 DDPLRLLRGIRFVGQLGMLGFSLDESVLLSVDGDLLE-KIIAKVSRERIGKEVIKMLSGP 284
Query: 302 --NQPVKAMTHICGLTLFWIV 320
+ V+ + +C L +V
Sbjct: 285 LSEKCVEVLYQLCILQRVLLV 305
>gi|401414774|ref|XP_003871884.1| putative tRNA nucleotidyltransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488104|emb|CBZ23351.1| putative tRNA nucleotidyltransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 523
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 149/253 (58%), Gaps = 12/253 (4%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
VR + ++ +F LLN L+ LRVAGGWVRD LLG DIDIA++ G+
Sbjct: 6 VRLEAAISPAHQSVFDFLLNVAAENKLKATLRVAGGWVRDMLLGLHSNDIDIAIETHAGT 65
Query: 126 E------FATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCE 179
+ FA +V+EY A G + + VI +NP SKH+ETAT++++++ ++F LR +
Sbjct: 66 KLVTGEVFAHRVSEYQLAHGGRSHT-VSVIRANPALSKHIETATVRVHEIPVEFCALRTD 124
Query: 180 DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP 239
Y+ SRIP +R EDA RRD TIN+LFYN++T VED T G+ DL+ I PL
Sbjct: 125 VYTSESRIPQVRPAAPLEDAQRRDFTINALFYNLHTGMVEDYTT-GLEDLRLRIIRCPLE 183
Query: 240 PKATFLDDPLRVLRAIRFGAR---FDFILDEELKKAAASDEVKAALAAKISRERVGTEID 296
P+ TF+DDPLR+LR +RF + +F LDE + + D + L K+SRERVG E
Sbjct: 184 PRTTFMDDPLRLLRGVRFVGQLGALNFSLDESI-TSCVDDSLLDVLQQKVSRERVGKEFV 242
Query: 297 LMVSGNQPVKAMT 309
M+ P + +
Sbjct: 243 KMMVAAHPERCIA 255
>gi|167393627|ref|XP_001740657.1| poly(A) polymerase [Entamoeba dispar SAW760]
gi|165895170|gb|EDR22921.1| poly(A) polymerase, putative [Entamoeba dispar SAW760]
Length = 484
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 184/352 (52%), Gaps = 27/352 (7%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
IELT E IF L NT ++FNL +RV GGWVRDK+L K+ +DIDI + + G +FA
Sbjct: 12 IELTQQEINIFKVLNNTKQYFNLNCTVRVVGGWVRDKILKKNSHDIDITSEGISGVQFAQ 71
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
V +YL + G + +N +Q++HL+TAT + +L IDF + R E+Y +NSRIP
Sbjct: 72 YVTKYLQSQGINTK-----LLTNREQTEHLQTATATICELPIDFGSPRAEEYKDNSRIPE 126
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
+R G+ ED RRD TIN LFY I +ED T G DL + I TP+ P +F DDPL
Sbjct: 127 IRKGSIYEDCIRRDFTINCLFYRIEDGVIEDYTS-GYEDLLNKLIRTPIDPLQSFTDDPL 185
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
RV R IRF A++ F +++ A S V + KI + R E++ ++ + P
Sbjct: 186 RVFRGIRFSAKYGFKIEDNTLNAMTSPTVLRGM-NKIKKSRRTPELNNILISSHPSYGF- 243
Query: 310 HI---CGLTLFWIVFKLPLQVEPEVLEGCE---MFCTAYLDAAWDLTQLIGS-STFNDDQ 362
H+ C L ++ + + E+++ M+C ++ S S DD
Sbjct: 244 HVFQYCHLLKEVLITEESTECNWEIVQSNSIPLMYCCE---------EVFNSISQVKDDT 294
Query: 363 RRLSQ--YAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNI 412
L AL F+N T+ K K++P++ + LK + + E V NI
Sbjct: 295 DMLKHLLLTALCYSFKNDTFFFKK-KELPMIPNIIIEGLKFTSKEREKVDNI 345
>gi|398009969|ref|XP_003858183.1| tRNA nucleotidyltransferase, putative [Leishmania donovani]
gi|322496388|emb|CBZ31459.1| tRNA nucleotidyltransferase, putative [Leishmania donovani]
Length = 523
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 148/253 (58%), Gaps = 12/253 (4%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
VR + + +F LL+ L+ LRVAGGWVRD LLG DIDIA++ G+
Sbjct: 6 VRLEAAIPPAHQSVFDFLLSVAAENKLKATLRVAGGWVRDMLLGLHSNDIDIAIETHAGT 65
Query: 126 E------FATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCE 179
+ FA +V+EY A G + VI SNP SKH+ETAT++++++ ++F LR +
Sbjct: 66 KLVTGEAFAHRVSEYQLAHGGRGHT-VSVIRSNPALSKHIETATVRVHEIPVEFCALRTD 124
Query: 180 DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP 239
Y+ SRIP +R EDA RRD TIN+LFYN++T VED T G+ DL+ I PL
Sbjct: 125 VYTNESRIPQVRPAAPVEDAQRRDFTINALFYNLHTGMVEDYTT-GLEDLRLRIIRCPLE 183
Query: 240 PKATFLDDPLRVLRAIRFGAR---FDFILDEELKKAAASDEVKAALAAKISRERVGTEID 296
P+ TF+DDPLR+LR +RF + +F LDE + + D + L K+SRERVG E
Sbjct: 184 PRTTFMDDPLRLLRGVRFVGQLGALNFSLDESI-TSCMDDALLQVLQQKVSRERVGKEFV 242
Query: 297 LMVSGNQPVKAMT 309
M++ P + +
Sbjct: 243 KMMAAAHPERCIA 255
>gi|146076571|ref|XP_001462959.1| putative tRNA nucleotidyltransferase [Leishmania infantum JPCM5]
gi|134067040|emb|CAM65146.1| putative tRNA nucleotidyltransferase [Leishmania infantum JPCM5]
Length = 523
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 148/253 (58%), Gaps = 12/253 (4%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
VR + + +F LL+ L+ LRVAGGWVRD LLG DIDIA++ G+
Sbjct: 6 VRLEAAIPPAHQSVFDFLLSVAAENKLKATLRVAGGWVRDMLLGLHSNDIDIAIETHAGT 65
Query: 126 E------FATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCE 179
+ FA +V+EY A G + VI SNP SKH+ETAT++++++ ++F LR +
Sbjct: 66 KLVTGEAFAHRVSEYQLAHGGRGHT-VSVIRSNPALSKHIETATVRVHEIPVEFCALRTD 124
Query: 180 DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP 239
Y+ SRIP +R EDA RRD TIN+LFYN++T VED T G+ DL+ I PL
Sbjct: 125 VYTNESRIPQVRPAAPVEDAQRRDFTINALFYNLHTGMVEDYTT-GLEDLRLRIIRCPLE 183
Query: 240 PKATFLDDPLRVLRAIRFGAR---FDFILDEELKKAAASDEVKAALAAKISRERVGTEID 296
P+ TF+DDPLR+LR +RF + +F LDE + + D + L K+SRERVG E
Sbjct: 184 PRTTFMDDPLRLLRGVRFVGQLGALNFSLDESI-TSCMDDALLQVLQQKVSRERVGKEFV 242
Query: 297 LMVSGNQPVKAMT 309
M++ P + +
Sbjct: 243 KMMAAAHPERCIA 255
>gi|242786904|ref|XP_002480896.1| poly(A) polymerase, putative [Talaromyces stipitatus ATCC 10500]
gi|218721043|gb|EED20462.1| poly(A) polymerase, putative [Talaromyces stipitatus ATCC 10500]
Length = 581
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 158/288 (54%), Gaps = 34/288 (11%)
Query: 61 PVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAG------GWVRDKLLGKDCYD 114
PV +Q IEL+ E + + LL+ H + + R AG GWVRDKLLGK D
Sbjct: 34 PVPIQ----IELSPAEHLLRTLLLDCRDHVSTGSGNRNAGDMWFVGGWVRDKLLGKQSCD 89
Query: 115 IDIALDNMMGSEFATKVAEYLS------------------ATGETAPS---GFGVIPSNP 153
ID+A+ NM G EF++ + E+LS AT P+ GF I NP
Sbjct: 90 IDVAMSNMTGPEFSSLLKEFLSLESDKSRTTTKGDIYKEQATKRGLPAEIRGFYEIDRNP 149
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNI 213
+ KHL+T + K++ L IDFVNLR E+ + R AE+DA RRD T+NS+FYN+
Sbjct: 150 KKGKHLQTTSAKIFGLDIDFVNLRTENDLTDQEGSVSR---AEQDAKRRDATVNSIFYNL 206
Query: 214 NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
++ +ED T G++DLK + TPL + TF DDPLR+LR +R + F +DE +
Sbjct: 207 DSQEIEDYTANGLSDLKAKVLRTPLDARKTFTDDPLRILRFVRLASTLGFTIDEGTETTI 266
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
E++ ++ + S ER+G E+ M++G PV A+ I L L+ VF
Sbjct: 267 RDSEIQCLISTRTSPERIGLELKKMITGPDPVTALMWIHRLGLYKQVF 314
>gi|330791394|ref|XP_003283778.1| hypothetical protein DICPUDRAFT_74768 [Dictyostelium purpureum]
gi|325086277|gb|EGC39669.1| hypothetical protein DICPUDRAFT_74768 [Dictyostelium purpureum]
Length = 573
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 140/233 (60%), Gaps = 5/233 (2%)
Query: 71 ELTDTETKIFSCLLNTLRHFNLETV-LRVAGGWVRDKLLG--KDCYDIDIALDNMMGSEF 127
+L + E I L L++ N + LRVAGGWVRDKLL + D+D A++N G EF
Sbjct: 29 DLNENEKHIIGYLKQVLQYHNRNDIELRVAGGWVRDKLLNYKNNKLDLDFAINNTTGVEF 88
Query: 128 ATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRI 187
+ +Y + I NP++SKHLET ++ + D I+F LR + Y ENSRI
Sbjct: 89 VEMIQKYRTEKELKTVYSEYTIKMNPEKSKHLETVSITIDDFTIEFNALRSDFYDENSRI 148
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDD 247
P ++ GT D+ RRDLTIN+LFYNINT VED +G G+ADL++G I TPL P T +D
Sbjct: 149 PQIQVGTLLSDSLRRDLTINALFYNINTLMVEDHSGYGLADLENGIIRTPLEPFNTLTED 208
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVS 300
PLR R +RF +F+F ++ L + + + + K+S+ER+ TE LM+S
Sbjct: 209 PLRAFRILRFATKFNFKIEPLLYQHIKT--INNNIIKKVSKERIYTEFFLMMS 259
>gi|76363838|ref|XP_888630.1| putative tRNA nucleotidyltransferase [Leishmania major strain
Friedlin]
gi|12311845|emb|CAC22663.1| putative tRNA nucleotidyltransferase [Leishmania major strain
Friedlin]
Length = 523
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 152/265 (57%), Gaps = 12/265 (4%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS 125
VR + + +F LL+ L+ LRVAGGWVRD LLG DIDIA++ G+
Sbjct: 6 VRLEAGIPPAHQSVFDFLLSVAAENKLKATLRVAGGWVRDMLLGLHSNDIDIAIETHAGA 65
Query: 126 E------FATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCE 179
+ FA +V+EY A G + VI +NP SKH+ETAT++++++ ++ LR +
Sbjct: 66 KIVTGEAFAHRVSEYQLAHGGRGHT-VSVIRANPALSKHIETATVRVHEIPVELCALRTD 124
Query: 180 DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP 239
Y+ SRIP +R EDA RRD TIN+LFYN++T VED T G+ DL+ I PL
Sbjct: 125 VYTNESRIPQVRPAAPVEDAQRRDFTINALFYNLHTGMVEDYT-TGLEDLRLRIIRCPLE 183
Query: 240 PKATFLDDPLRVLRAIRFGAR---FDFILDEELKKAAASDEVKAALAAKISRERVGTEID 296
P+ TF+DDPLR+LR +RF + +F LDE + + D + L K+SRERVG E
Sbjct: 184 PRTTFMDDPLRLLRGVRFVGQLGALNFSLDESI-TSCVDDSLLQVLQQKVSRERVGKEFV 242
Query: 297 LMVSGNQPVKAMTHICGLTLFWIVF 321
M++ P + + + G+ + V
Sbjct: 243 KMMAAAHPERCIALLHGMHILQHVL 267
>gi|123500935|ref|XP_001327963.1| polyA polymerase family protein [Trichomonas vaginalis G3]
gi|121910900|gb|EAY15740.1| polyA polymerase family protein [Trichomonas vaginalis G3]
Length = 454
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 148/252 (58%), Gaps = 9/252 (3%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVL-RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATK 130
LT E ++ + T F +TV+ R+ GGWVRDKLLG DID +++ G FA K
Sbjct: 17 LTPFEKQVIELIKKTCESFAPQTVIARIVGGWVRDKLLGSHSDDIDFSIEGTDGLTFANK 76
Query: 131 VAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLY-DLWIDFVNLRCEDYSENSRIPT 189
+ + S A V+ +NPDQS H+ +A + L + +ID LR +DYS +SRIP
Sbjct: 77 IKKVAS----KAEFPDLVVMANPDQSAHIGSAKVYLTPEFYIDICGLRWDDYSTDSRIPV 132
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
+ GT ++DA RRD+TINS+F NINT VED T GI DL++ + TP P +FLDDPL
Sbjct: 133 ITVGTPQQDAIRRDVTINSIFLNINTFKVEDFTN-GIPDLENRLLRTPQPAGQSFLDDPL 191
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
R+LR RFGAR+DF L E++ +AAS ++ K++ ER EI + G K +T
Sbjct: 192 RILRIFRFGARYDFNLHEDIIPSAAS--ARSEYEVKVTAERANLEITKALEGPLAYKYVT 249
Query: 310 HICGLTLFWIVF 321
I +F VF
Sbjct: 250 WIAEAGMFQSVF 261
>gi|67478802|ref|XP_654783.1| tRNA nucleotidyltransferase [Entamoeba histolytica HM-1:IMSS]
gi|56471858|gb|EAL49397.1| tRNA nucleotidyltransferase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704161|gb|EMD44454.1| tRNA nucleotidyltransferase, putative [Entamoeba histolytica KU27]
Length = 484
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 178/358 (49%), Gaps = 39/358 (10%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
IELT E IF L NT ++FNL +RV GGWVRDK+L K+ +DIDI + + G +FA
Sbjct: 12 IELTQQEINIFKVLNNTKQYFNLSCTVRVVGGWVRDKILKKNSHDIDITSEGISGVQFAQ 71
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
V +YL G + +N +Q++HL+TAT + +L IDF + R E+Y +NSRIP
Sbjct: 72 YVTQYLQLQGINTK-----LLTNREQTEHLQTATTTICELPIDFGSPRAEEYKDNSRIPE 126
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
+R G+ ED RRD TIN LFY I +ED T G DL + I TP+ P +F DDPL
Sbjct: 127 IRKGSIYEDCIRRDFTINCLFYRIEDGMIEDYTN-GYEDLVNKIIRTPIDPIQSFTDDPL 185
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
RV R IRF A++ F +++ A + V + KI + R E++ ++ + P
Sbjct: 186 RVFRGIRFSAKYGFKIEDNTLNAMTNPTVLRGM-NKIKKSRRTPELNNILISSHPSY--- 241
Query: 310 HICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQL-------IGSSTFN--- 359
G +F L + E C W++ QL FN
Sbjct: 242 ---GFHVFQYCHLLKEILITEESNECN----------WEMVQLNSVPLMYCCEEVFNSIN 288
Query: 360 ---DDQRRLSQ--YAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNI 412
DD L AL F+N T+ K K++P++ + LK + + E V NI
Sbjct: 289 QVKDDTDMLKHLLLTALCYSFKNDTFLLKK-KELPMIPNIIIEGLKFTSKEREKVDNI 345
>gi|212543517|ref|XP_002151913.1| poly(A) polymerase, putative [Talaromyces marneffei ATCC 18224]
gi|210066820|gb|EEA20913.1| poly(A) polymerase, putative [Talaromyces marneffei ATCC 18224]
Length = 607
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 147/264 (55%), Gaps = 42/264 (15%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETA-PS-------------- 144
GGWVRDKLLG DID+A+ NM G EFA+ + ++LS+ A P+
Sbjct: 82 GGWVRDKLLGNQSCDIDVAMSNMTGPEFASHLKDFLSSESRPAQPAELSTSEPDEKSKTQ 141
Query: 145 ----------------------GFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYS 182
GF I NP + KHL+T + K++ L IDFVNLR E
Sbjct: 142 AQTKGDIYKQQATKAGLSTEIRGFYEIDRNPKKGKHLQTTSAKIFGLDIDFVNLRTETQE 201
Query: 183 ---EN-SRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
EN SR+ +AEEDAYRRD T+N++FYN++T VED T +G+ DL+ + TPL
Sbjct: 202 LQVENLSRVGREFGSSAEEDAYRRDATVNAIFYNLDTQRVEDYTTKGLQDLEAKVLRTPL 261
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDE-ELKKAAASDEVKAALAAKISRERVGTEIDL 297
+ TF DDPLR+LR +R + F +DE + ++A S E+++ + +IS ER+G E+
Sbjct: 262 DARVTFTDDPLRILRFVRLASTLGFTIDEGDTQQAMKSPEIQSLIGTRISPERIGLELKK 321
Query: 298 MVSGNQPVKAMTHICGLTLFWIVF 321
MV+G PV A+ I L L+ VF
Sbjct: 322 MVTGPDPVTALLWIHRLKLYKHVF 345
>gi|407044842|gb|EKE42859.1| tRNA nucleotidyltransferase, putative [Entamoeba nuttalli P19]
Length = 484
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 178/358 (49%), Gaps = 39/358 (10%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I+LT E IF L NT ++FNL +RV GGWVRDK+L K+ +DIDI + + G +FA
Sbjct: 12 IDLTQQEIDIFKVLNNTKQYFNLSCTVRVVGGWVRDKILKKNSHDIDITSEGISGVQFAQ 71
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
V +YL G + +N +Q++HL+TAT + +L IDF + R E+Y +NSRIP
Sbjct: 72 YVTQYLQLQGINTK-----LLTNREQTEHLQTATTTICELPIDFGSPRAEEYKDNSRIPE 126
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
+R G+ ED RRD TIN LFY I +ED T G DL + I TP+ P +F DDPL
Sbjct: 127 IRKGSIYEDCIRRDFTINCLFYRIEDGMIEDYTN-GYEDLVNKIIRTPIDPIQSFTDDPL 185
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
RV R IRF A++ F +++ A + V + KI + R E++ ++ + P
Sbjct: 186 RVFRGIRFSAKYGFKIEDNTLNAMTNPSVLRGM-NKIKKSRRTPELNNILISSHPSY--- 241
Query: 310 HICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQL-------IGSSTFN--- 359
G +F L + E C W++ QL FN
Sbjct: 242 ---GFHVFQYCHLLKEILITEESNECN----------WEMVQLNSVPLMYCCEEVFNSIN 288
Query: 360 ---DDQRRLSQ--YAALFLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNI 412
DD L AL F+N T+ K K++P++ + LK + + E V NI
Sbjct: 289 QVKDDTDMLKHLLLTALCYSFKNDTFLLKK-KELPMIPNIIIEGLKFTSKEREKVDNI 345
>gi|261331417|emb|CBH14411.1| tRNA nucleotidyltransferase, putative [Trypanosoma brucei gambiense
DAL972]
Length = 526
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 143/233 (61%), Gaps = 12/233 (5%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALD-----NMMGSEFATKVA 132
KIF LL N+ LRVAGGWVRD LLG DIDIA++ ++ G FA +VA
Sbjct: 19 KIFDFLLRVNEERNINATLRVAGGWVRDSLLGLHSQDIDIAIESATTRHVSGELFAREVA 78
Query: 133 EYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE-NSRIPTMR 191
+ A G TA + VI NP+ SKH+ETAT+ +YD I+F LR ++Y+ +SRIP +R
Sbjct: 79 SHQEALGMTART-VSVIRVNPELSKHIETATVCVYDTPIEFCALRHDEYTRSDSRIPVVR 137
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
T EDA RRD T+N+LFYN++T VED T G+ DL + PL PK T DDPLR+
Sbjct: 138 PATTVEDALRRDYTVNALFYNLHTKEVEDYT-TGLEDLDRRILRCPLDPKETLTDDPLRL 196
Query: 252 LRAIRFGAR---FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
LR +RF + F+LDE + + + +K + K+SRERVG E+ M+SG
Sbjct: 197 LRGVRFVGQLGELGFVLDESIFRCVDKELLK-KVTLKVSRERVGKELVKMLSG 248
>gi|71409152|ref|XP_806937.1| tRNA nucleotidyltransferase [Trypanosoma cruzi strain CL Brener]
gi|70870822|gb|EAN85086.1| tRNA nucleotidyltransferase, putative [Trypanosoma cruzi]
Length = 526
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/243 (43%), Positives = 145/243 (59%), Gaps = 12/243 (4%)
Query: 75 TETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALD-----NMMGSEFAT 129
+ IF+ LL + LRVAGGWVRD LLG DIDIA++ ++ G FA
Sbjct: 16 AHSNIFALLLRVNEERRIFATLRVAGGWVRDALLGLHSQDIDIAIESSDLRHVSGELFAR 75
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE-NSRIP 188
+V+ Y A G A + VI NP+ SKH+ETAT+ + D I+F LR ++Y+ NSRIP
Sbjct: 76 EVSAYQEAMGMAART-VSVIRVNPELSKHIETATVCVCDTPIEFCALRHDEYTRSNSRIP 134
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
+R T EDA RRD TIN+LFYN++T VED T G+ DL+ + PL P+ TF DDP
Sbjct: 135 EVRPATPLEDALRRDFTINALFYNLHTMEVEDYTS-GLEDLQRRVLRCPLEPRETFTDDP 193
Query: 249 LRVLRAIRFGAR---FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
LR+LR IRF + F LD+ + + D ++ + K+SRER+G E+ M+SG P
Sbjct: 194 LRLLRGIRFVGQLGELGFSLDDSIMRCVNKDLLE-KMTVKVSRERIGKELVKMLSGPSPE 252
Query: 306 KAM 308
K +
Sbjct: 253 KCV 255
>gi|385303766|gb|EIF47819.1| trna nucleotidyltransferase [Dekkera bruxellensis AWRI1499]
Length = 214
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 124/194 (63%), Gaps = 18/194 (9%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETV---------LRVAGGWVRDKLLGKDCYDIDIALD 120
I L D E +I + L + +++N LR+ GGWVRDKLLGK+ +DIDI +D
Sbjct: 12 IVLNDKEKQITTTLQDYTKYYNXNIANDKDIQPIELRITGGWVRDKLLGKESHDIDIGID 71
Query: 121 NMMGSEFATKVAEYL-------SATGE--TAPSGFGVIPSNPDQSKHLETATMKLYDLWI 171
++ G EF T + EYL S TG+ T+ +G I NP++SKHLET T L I
Sbjct: 72 HISGLEFVTGLKEYLDRQTEDISGTGKITTSLTGIHKIKKNPEKSKHLETCTTHLLGNDI 131
Query: 172 DFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKH 231
DFVNLR E Y+E+SRIPT++ G+ +EDAYRRD T+NSLF+N+ T VEDLTGRG+ DLK
Sbjct: 132 DFVNLRSEKYTEDSRIPTIKAGSPKEDAYRRDATLNSLFFNLRTMQVEDLTGRGLQDLKD 191
Query: 232 GKIVTPLPPKATFL 245
G + TPL P+
Sbjct: 192 GILRTPLEPEKNIF 205
>gi|407844091|gb|EKG01785.1| tRNA nucleotidyltransferase, putative [Trypanosoma cruzi]
Length = 526
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 148/254 (58%), Gaps = 12/254 (4%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALD-----NMMGSEFATKV 131
+ IF+ LL + LRVAGGWVRD LLG DIDIA++ ++ G FA +V
Sbjct: 18 SNIFALLLRVNEERRVFATLRVAGGWVRDALLGLHSQDIDIAIESSDLRHVSGELFAREV 77
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE-NSRIPTM 190
+ Y A G A + VI NP+ SKH+ETAT+ + D I+F LR ++Y+ NSRIP +
Sbjct: 78 SAYQEAMGMAART-VSVIRVNPELSKHIETATVCVCDTPIEFCALRHDEYTRSNSRIPEV 136
Query: 191 RFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLR 250
R T EDA RRD TIN+LFYN++T VED T G+ DL+ + PL P+ TF DDPLR
Sbjct: 137 RPATPLEDALRRDFTINALFYNLHTMEVEDYTS-GLEDLQRRVLRCPLEPRETFTDDPLR 195
Query: 251 VLRAIRFGAR---FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
+LR IRF + F LD+ + D ++ + K+SRER+G E+ M+SG P K
Sbjct: 196 LLRGIRFVGQLGELGFSLDDSIMCCVNKDLLE-KMTVKVSRERIGKELVKMLSGPSPEKC 254
Query: 308 MTHICGLTLFWIVF 321
+ + L + V
Sbjct: 255 VEILLELGILQQVL 268
>gi|154331972|ref|XP_001561803.1| putative tRNA nucleotidyltransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059123|emb|CAM41598.1| putative tRNA nucleotidyltransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 518
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 145/253 (57%), Gaps = 12/253 (4%)
Query: 66 VRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDN---- 121
+R + ++ K+F LL+ LE LRVAGGWVRD LLG DIDIA++
Sbjct: 1 MRLEAAISPAHQKVFDVLLSVAAESKLEATLRVAGGWVRDMLLGLHSNDIDIAIETHPNA 60
Query: 122 --MMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCE 179
+ G FA V++Y G+ + VI SNP SKH+ETAT+++ ++ ++F LR +
Sbjct: 61 EPVTGEAFAHHVSKYQLFHGDRS-HKVSVIRSNPALSKHIETATLRVNEIPVEFCALRSD 119
Query: 180 DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLP 239
Y++ SRIP + EDA RRD TIN+LFYN++T VED T G+ DL+ I PL
Sbjct: 120 VYTDESRIPQVHPAAPLEDAQRRDFTINALFYNLHTGMVEDYTT-GLEDLRLRIIRCPLE 178
Query: 240 PKATFLDDPLRVLRAIRFGAR---FDFILDEELKKAAASDEVKAALAAKISRERVGTEID 296
P+ TF DDPLR+LR +RF + +F LD EL D + L K+SRER+G E
Sbjct: 179 PRTTFTDDPLRLLRGVRFVGQLGALNFSLD-ELITNCVDDSLLDVLQLKVSRERIGKEFV 237
Query: 297 LMVSGNQPVKAMT 309
M++ P + +
Sbjct: 238 KMMTAAHPERCIA 250
>gi|71423978|ref|XP_812639.1| tRNA nucleotidyltransferase [Trypanosoma cruzi strain CL Brener]
gi|70877445|gb|EAN90788.1| tRNA nucleotidyltransferase, putative [Trypanosoma cruzi]
Length = 526
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/256 (42%), Positives = 148/256 (57%), Gaps = 12/256 (4%)
Query: 75 TETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALD-----NMMGSEFAT 129
+ IF+ LL + LRVAGGWVRD LLG DIDIA++ ++ G FA
Sbjct: 16 AHSNIFAFLLRVNEERRIFATLRVAGGWVRDALLGLHSQDIDIAIESSDLRHVSGELFAR 75
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE-NSRIP 188
+V+ Y A G A + VI NP+ SKH+ETAT+ + D I+F LR ++Y+ NSRIP
Sbjct: 76 EVSAYQEAMGMAART-VSVIRVNPELSKHIETATVCVCDTPIEFCALRHDEYTRSNSRIP 134
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
+R T EDA RRD TIN+LFYN++T VED T G+ DL+ + PL P+ TF DDP
Sbjct: 135 EVRPATPLEDALRRDFTINALFYNLHTMEVEDYTS-GLEDLQRRVLRCPLEPRETFTDDP 193
Query: 249 LRVLRAIRFGAR---FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
LR+LR IRF + F LD+ + D ++ + K+SRER+G E+ M+SG P
Sbjct: 194 LRLLRGIRFVGQLGELGFSLDDSIMCCVNKDLLE-KMTVKVSRERIGKELVKMLSGPSPE 252
Query: 306 KAMTHICGLTLFWIVF 321
K + + L + V
Sbjct: 253 KCVELLLELGILQHVL 268
>gi|440297835|gb|ELP90476.1| polyA polymerase, putative [Entamoeba invadens IP1]
Length = 515
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 144/245 (58%), Gaps = 14/245 (5%)
Query: 53 MSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDC 112
MSE P +Q LTD E IFS L+ ++FN+ET +RV GGWVRDK++ +
Sbjct: 1 MSEGGVPHLYKMQT----PLTDQEMSIFSLLITVKKYFNIETGIRVVGGWVRDKVMRLES 56
Query: 113 YDIDIALDNMMGSEFATKVAEYLSATG-ETAPSGFGVIPSNPDQSKHLETATMKLYDLWI 171
+DIDI D + G EF+ V EYL A T+ + + QS+HL TAT+ Y L I
Sbjct: 57 HDIDITTDGVSGVEFSNYVIEYLHANNIPTSSTKYAT------QSEHLATATVSFYGLSI 110
Query: 172 DFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKH 231
DF + R E+Y ++RIP +R GT ED RRD TIN LFY I +ED + G AD+ +
Sbjct: 111 DFNSPRAEEY-HDTRIPIIRKGTLLEDCLRRDFTINGLFYRIEDGVIEDYSS-GYADINN 168
Query: 232 GKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERV 291
+ TP+ P +F+DDPLRV R IRF ++F F +++ +A S+ K + K+++ER
Sbjct: 169 KVLKTPIDPFVSFVDDPLRVYRGIRFASKFTFTIEKNTWEAMHSEAFK-RVTNKVTKERR 227
Query: 292 GTEID 296
EI+
Sbjct: 228 LPEIN 232
>gi|123374577|ref|XP_001297753.1| polyA polymerase family protein [Trichomonas vaginalis G3]
gi|121878046|gb|EAX84823.1| polyA polymerase family protein [Trichomonas vaginalis G3]
Length = 450
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 155/274 (56%), Gaps = 11/274 (4%)
Query: 90 FNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVI 149
F+ V R+AGGWVRDKL+ K+ D D+ L+ G EFA + YL E+ VI
Sbjct: 31 FDHPVVARLAGGWVRDKLIDKESKDYDVTLEGCTGVEFANNLCTYL----ESKSIEHRVI 86
Query: 150 PSNPDQSKHLETATMKLY-DLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINS 208
NPDQSKHL +A + L+ ++WIDF +LR E Y E+SRIP + GT +DA RRD TIN+
Sbjct: 87 -RNPDQSKHLSSAKVCLFGEVWIDFSSLRSEKYKEDSRIPIVEEGTPLQDAERRDFTINT 145
Query: 209 LFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
L+YNI T VED G DL++ + TP +F +DPLR+LRA+RF +RF+ +E
Sbjct: 146 LYYNICTKKVEDFFN-GYQDLQNKILRTPKDSLVSFQEDPLRILRALRFASRFNLTYEES 204
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP--LQ 326
+ A ++ + K++ ER EI + G P++ + F I+F L+
Sbjct: 205 IPNAI--EQCRDVYLHKVTPERAAAEISPALLGPDPIRYIKDSMKFGFFQIMFNRSKELE 262
Query: 327 VEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFND 360
++ +V+ F ++L + L ++G+ F++
Sbjct: 263 LDNDVVIKRVTFALSHLHKEYQLQLILGAIYFDE 296
>gi|346320439|gb|EGX90039.1| poly(A) polymerase, putative [Cordyceps militaris CM01]
Length = 519
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 166/346 (47%), Gaps = 48/346 (13%)
Query: 69 KIELTDTETKIFSCLLNTLRHF-NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEF 127
+I+L E + LL +HF LE + + GGWVRD+LLG D+D+AL N+ G EF
Sbjct: 6 QIQLQPAEQLLREFLLEAAQHFPGLE--IWITGGWVRDRLLGIPSSDLDLALSNLTGKEF 63
Query: 128 AT-------------KVAEYLSATGETAP--SGFGVIPSNPDQSKHLETATMKLYDLWID 172
T K + + G + P S F + N K LETA L+ L +D
Sbjct: 64 GTFLQTFSATPEIEAKYTQKAAKLGLSRPCFSRFHITKKNAKTCKKLETAGGVLFGLDVD 123
Query: 173 FVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHG 232
VNLR E Y SR P M FGTA EDA RRD T N+LF+++ V D TGRG+ DL+
Sbjct: 124 LVNLRKEVYDGQSRNPEMEFGTAAEDASRRDATANALFFHLERKEVVDFTGRGLQDLQAK 183
Query: 233 KIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVG 292
+ TPL PK T LDDPLRVLR IR + F + E EV AL A I+R+R+G
Sbjct: 184 IMRTPLDPKQTLLDDPLRVLRLIRVAGKLGFSVAPETALCMQDPEVHGALDAMITRDRIG 243
Query: 293 TEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAY---------- 342
E+ M++ ++ + L+ VF ++++ +L+ C+++
Sbjct: 244 AELVKMMTNENSEASLKLLFECRLYSPVF---VRLDSALLQLLAAQCSSWGIRSASSAWP 300
Query: 343 -------------LDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPF 375
LD L+ LI DD R L A + PF
Sbjct: 301 TPLPRAYRTLARLLDGGGSLSSLI----IPDDNRHLLWILAAYSPF 342
>gi|407405090|gb|EKF30259.1| tRNA nucleotidyltransferase, putative [Trypanosoma cruzi
marinkellei]
Length = 525
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/243 (42%), Positives = 144/243 (59%), Gaps = 12/243 (4%)
Query: 75 TETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALD-----NMMGSEFAT 129
+ IF+ LL + LRVAGGWVRD LLG DIDIA++ ++ G FA
Sbjct: 16 AHSNIFAFLLRVNEERRIFATLRVAGGWVRDALLGLHSQDIDIAIESPDCRHVSGELFAR 75
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE-NSRIP 188
+V+ Y A G TA + VI NP+ SKH+ETAT+ + + I+F LR ++Y+ +SRIP
Sbjct: 76 EVSAYQEAMGMTART-VSVIRVNPEFSKHIETATVCVCETPIEFCALRHDEYTRSDSRIP 134
Query: 189 TMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
+R T EDA RRD TIN+LFYN++T VED T G+ DL+ + PL P+ TF DDP
Sbjct: 135 EVRPATPLEDALRRDFTINALFYNLHTMEVEDYTS-GLEDLQRRVLRCPLEPRETFTDDP 193
Query: 249 LRVLRAIRFGAR---FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
LR+LR IRF + F LD+ + D ++ + K+SRER+G E+ M+SG
Sbjct: 194 LRLLRGIRFVGQLGELGFSLDDSIMGCVNKDLLE-KMTVKVSRERIGKELVKMLSGPSSE 252
Query: 306 KAM 308
K +
Sbjct: 253 KCV 255
>gi|123408241|ref|XP_001303159.1| polyA polymerase family protein [Trichomonas vaginalis G3]
gi|121884516|gb|EAX90229.1| polyA polymerase family protein [Trichomonas vaginalis G3]
Length = 449
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 139/254 (54%), Gaps = 24/254 (9%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
LT E+ IF + + HF + V RVAGGWVRDKLL K+C DIDI ++ EFA ++
Sbjct: 15 LTKNESVIFDKIRSAGDHFGNKVVCRVAGGWVRDKLLNKECDDIDICVEGCTSEEFALQL 74
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLY-DLWIDFVNLRCEDYSENSRIPTM 190
AE + V NP Q+K ++T + +Y WID NLR E+
Sbjct: 75 AEQYPKKA----TKIVVFEENPKQAKFMKTVRVCIYGSAWIDICNLRGENL--------- 121
Query: 191 RFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLR 250
TA DA RDL+IN+LFYNI S VED G GI DLK+ I TP+ P TF +DPLR
Sbjct: 122 -VATALTDAQHRDLSINALFYNITDSKVEDFVG-GIQDLKNQVIRTPISPDVTFTEDPLR 179
Query: 251 VLRAIRFGARFDFILDE---ELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
++R+IRF R+ + +DE E+ K SD ++S+ER+ +EI ++ + ++
Sbjct: 180 IIRSIRFHVRYGYKIDENLLEIAKLHLSD-----FEQRVSKERIASEIIKIIRMDGFIEF 234
Query: 308 MTHICGLTLFWIVF 321
+ I + F +F
Sbjct: 235 VDLIIKIGFFETIF 248
>gi|323305310|gb|EGA59057.1| Cca1p [Saccharomyces cerevisiae FostersB]
Length = 192
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 110/181 (60%), Gaps = 8/181 (4%)
Query: 149 IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINS 208
IP NP K + + + +DFVNLR E Y+E SRIP + FGT EEDA RRD T+N+
Sbjct: 14 IPRNPSIWK---LPLLSSFGVEVDFVNLRSEKYTELSRIPKVCFGTPEEDALRRDATLNA 70
Query: 209 LFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
LFYNI VED T RG+ DLK G + TPLP K FLDDPLRVLR IRF +RF+F +D E
Sbjct: 71 LFYNIXKGEVEDFTKRGLQDLKDGVLRTPLPAKQXFLDDPLRVLRLIRFASRFNFTIDPE 130
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM-----THICGLTLFWIVFKL 323
+ + A +KISRERVG E++ ++ G P+ A+ H+ + LF +
Sbjct: 131 VMAEMGDPXINVAFNSKISRERVGVEMEKILVGPTPLLALQLIQRAHLENVYLFXXIMIA 190
Query: 324 P 324
P
Sbjct: 191 P 191
>gi|242091169|ref|XP_002441417.1| hypothetical protein SORBIDRAFT_09g026295 [Sorghum bicolor]
gi|241946702|gb|EES19847.1| hypothetical protein SORBIDRAFT_09g026295 [Sorghum bicolor]
Length = 384
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 162/332 (48%), Gaps = 23/332 (6%)
Query: 65 QVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMG 124
V + +T TE IF L + N + LR+ G +D I I + M
Sbjct: 22 HVAGSLRVTATEASIFDLLRSVALRCNPQVTLRIQG---------QDQTRIYIGVLGMSA 72
Query: 125 SEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSEN 184
F K+ EYL + + +G V+ + K + + L + F+ ++ Y+ +
Sbjct: 73 RIFTDKLMEYLVES-DLLSTGITVVRN----LKQVGAPCIILSGKSVYFLGIKAGTYTGS 127
Query: 185 SRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVT-PLPPKAT 243
++ M ED Y DLTINSL YNIN S V+D+TGRG D+K+ I+T LPP ++
Sbjct: 128 AQSCVMERPYDSEDLYHADLTINSLVYNINDSVVQDITGRGFDDIKNRLIITTSLPPLSS 187
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
L DPL +LR+I F ++ +F LDE+L +A ++ L +++SRER+ E+ LM+
Sbjct: 188 ILKDPLIILRSIHFASQLNFTLDEDLMRAGGDTRLRRELCSRVSRERINREVSLMLVSKH 247
Query: 304 PVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFND--- 360
PV AM +I + LF +VF P + + + C C A L+ L I +S F+
Sbjct: 248 PVMAMKYIEEMGLFRVVFTFPGNSDHPIDDHCARSCIATLEEFCMLLDSIENSVFSGNID 307
Query: 361 -----DQRRLSQYAALFLPFRNTTYKDNKGKK 387
D R + YAALFL Y D +K
Sbjct: 308 QRVRADHRLICMYAALFLILSEAVYMDQNDEK 339
>gi|440797404|gb|ELR18491.1| tRNA nucleotidyltransferase, putative [Acanthamoeba castellanii
str. Neff]
Length = 548
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 140/274 (51%), Gaps = 41/274 (14%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLG--KDCYDIDIALDNMMGSE 126
++ELT ET +F L+ + + TV+RVAGGW LLG DID+ +DNM
Sbjct: 2 ELELTQEETDLFGLLMAVVAESDCRTVVRVAGGW----LLGIRDGGGDIDLVVDNMPAVA 57
Query: 127 FATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSR 186
FA +A + + ET G VI S P+Q KH+E +KL D E S + R
Sbjct: 58 FADLLARHRPS--ET--KGGKVIGSRPEQHKHVEVVALKLLD-----GAAAIELSSHHGR 108
Query: 187 IPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLD 246
P EE+A RRD TINSL YNIN ++VED TG G+ADL+ G + TPLPP T
Sbjct: 109 TP-------EEEARRRDFTINSLLYNINQAAVEDFTGMGVADLRAGLLRTPLPPGETLGQ 161
Query: 247 DPLRVLR-AIRFGARFDFILDEELKKAAAS------------------DEVKAALAAKIS 287
DPLR+LR A RFG R D L +K AA D + L + I
Sbjct: 162 DPLRILRFAARFGFRVDAQLAAAMKDAALQLCLVTLWLPNRADDDDVIDHAQKELGSTIG 221
Query: 288 RERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
R+R+ E+ M+SG +P + +C L IVF
Sbjct: 222 RQRIAAEVTKMLSGPRPHVTLMALCQDDLHRIVF 255
>gi|400596523|gb|EJP64294.1| tRNA nucleotidyltransferase [Beauveria bassiana ARSEF 2860]
Length = 434
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 116/186 (62%), Gaps = 3/186 (1%)
Query: 149 IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINS 208
+ N + SK LETA +L+ L ID VNLR E Y +R P M FGTAEEDA+RRD T+N+
Sbjct: 1 MKKNANMSKKLETAGGRLFGLDIDLVNLRKEVYDGQTRNPDMEFGTAEEDAFRRDATVNA 60
Query: 209 LFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
LFY++ V DLTG G+ DL + TPL P TF+DDPLRVLR IR G++ F +D E
Sbjct: 61 LFYHLKKQQVVDLTGLGLQDLDAKIMRTPLNPMQTFMDDPLRVLRLIRVGSKLGFSIDPE 120
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVE 328
S +++ AL I+R+RVG E+ M++ P A T+I L L+ +F ++++
Sbjct: 121 AASCMRSTQIRRALDTIITRDRVGAELIKMMASPTPEMAFTYIFDLHLYAPIF---IRLD 177
Query: 329 PEVLEG 334
E+LE
Sbjct: 178 AELLEA 183
>gi|326499572|dbj|BAJ86097.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 117/189 (61%), Gaps = 9/189 (4%)
Query: 338 FCTAYLDAAWDLTQLIGSSTFN--------DDQRRLSQYAALFLPFRNTTYKDNKGKKIP 389
C ++L+AAW+L IG S F+ D+Q+RL Y+ALF P RN Y D K KK+P
Sbjct: 21 LCVSHLEAAWNLAHSIGRSVFSGGSDSKSQDEQQRLCLYSALFTPVRNMFYMDKKSKKVP 80
Query: 390 VVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDA 449
VV+Y RDSLK KASDA+T++NIH EKF LI L S E+++ + E +++P
Sbjct: 81 VVSYIIRDSLKLKASDADTIVNIHVASEKFAELILLLESNENLETLKEKLDDEYLEIPTD 140
Query: 450 SKLRVLTGFLLREIKKFWRVALLISTLLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAI 509
RV G +LREIK FWR+AL ISTL+YP V + D + +LD +++ + + E++I
Sbjct: 141 LVKRVFAGIILREIKGFWRLALFISTLVYP-EVGNASDSPGEQDELDKRKERYNSVERSI 199
Query: 510 TKLGMVSIF 518
T L + ++
Sbjct: 200 TDLDLDGVW 208
>gi|147827431|emb|CAN68615.1| hypothetical protein VITISV_023389 [Vitis vinifera]
Length = 240
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 100/133 (75%)
Query: 388 IPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVP 447
IPVVN+ R+SLK +ASDA+TV++IH +EKF+SLIP + S E +++++ +W E++D+P
Sbjct: 52 IPVVNHIIRNSLKLRASDADTVVSIHCAVEKFISLIPFIESTESIQISEAEWGIEILDLP 111
Query: 448 DASKLRVLTGFLLREIKKFWRVALLISTLLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEK 507
SKLR+LTG LLREIK FWRVAL++STLLYP ++HT D+ +FQLD +R +F E
Sbjct: 112 VTSKLRILTGLLLREIKGFWRVALMVSTLLYPNDINHTRDISKNNFQLDKRRKVFEMVEN 171
Query: 508 AITKLGMVSIFFL 520
AI LG+ ++ L
Sbjct: 172 AIVGLGLEEVWEL 184
>gi|123446371|ref|XP_001311937.1| polyA polymerase family protein [Trichomonas vaginalis G3]
gi|121893765|gb|EAX99007.1| polyA polymerase family protein [Trichomonas vaginalis G3]
Length = 457
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 163/322 (50%), Gaps = 26/322 (8%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPD 154
++R+AGGWVRDK+LGK+ DIDIA+ +EF+ + + L + ++ +N +
Sbjct: 39 IVRIAGGWVRDKILGKENDDIDIAISGATCTEFSQTMVKVLGPNTKVV-----ILEANHE 93
Query: 155 QSKHLETATMKLY-DLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNI 213
QSKHL TA + L+ D W+D LR E YSE GTA+ DA RD ++N+LF+N+
Sbjct: 94 QSKHLNTARVCLFRDFWLDICGLRSESYSEGE----TSEGTAQSDARHRDFSMNALFFNL 149
Query: 214 NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
T +ED +G+ +K I TP+ F DDP R++R RF A++DF +D+E+ A
Sbjct: 150 QTMKIEDYV-KGVQSIKDKVIRTPISAIEDFTDDPNRIVRCFRFVAKYDFQIDQEILDAI 208
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
++ I+++R+ TE+ M+ AM H+ + +F + E L
Sbjct: 209 P--KIIPLFLHNITKDRIATELTKMLHAKSAFFAMQHLISSGMLSPIF------DSESLW 260
Query: 334 GCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTTY---KDNKGKKIPV 390
+M T L + Q+ T ND ++ +AA+ L + K K +P
Sbjct: 261 SLDMEKT--LQRVRRVHQIQPDLTGNDSM--ITYFAAVLLDLEEKKAVPDPEKKNKPMPA 316
Query: 391 VNYTFRDSLKRKASDAETVMNI 412
+ Y S++ + + A+ V I
Sbjct: 317 ITYQIVRSMRLQNALADNVKKI 338
>gi|322693496|gb|EFY85354.1| poly(A) polymerase [Metarhizium acridum CQMa 102]
Length = 427
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 118/205 (57%), Gaps = 18/205 (8%)
Query: 70 IELTDTETKIFSCLLNTLRHF-NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA 128
I L E + LL +HF LE + + GGWVRD+LL D+D AL+N+ G +F
Sbjct: 8 ISLLPAEGLLREYLLECAQHFPGLE--IWITGGWVRDRLLDIPSSDLDEALNNITGRDFG 65
Query: 129 TKVAEYLSATGETAP---------------SGFGVIPSNPDQSKHLETATMKLYDLWIDF 173
+ + S A S F ++ N D++K+LETA KL+ L ID
Sbjct: 66 KFLEAFSSRPDIQAKYHQKAIELGIPDARFSRFHILERNADKAKNLETAGGKLFGLDIDL 125
Query: 174 VNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGK 233
V LR E Y +SR P M+FGT EEDA+RRD T+NSLF+++ V DLTG+G+ DL+
Sbjct: 126 VILRKEVYDGHSRAPEMQFGTPEEDAFRRDATVNSLFFHLERQEVVDLTGKGLDDLESRI 185
Query: 234 IVTPLPPKATFLDDPLRVLRAIRFG 258
+ TPL P+ TF+DDPLR LR IR G
Sbjct: 186 MRTPLDPRQTFMDDPLRTLRLIRVG 210
>gi|123448783|ref|XP_001313117.1| polyA polymerase family protein [Trichomonas vaginalis G3]
gi|121894989|gb|EAY00188.1| polyA polymerase family protein [Trichomonas vaginalis G3]
Length = 448
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 125/224 (55%), Gaps = 18/224 (8%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
LT+ E +F + F+ + + RVAGGWVRDKLLGK DIDI ++ +F K+
Sbjct: 20 LTEKEVSVFEKIKAAGSCFDPQVICRVAGGWVRDKLLGKQSDDIDICIEGCTSDDFGQKL 79
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLY-DLWIDFVNLRCEDYSENSRIPTM 190
++ + V+ NP QSK ++T + ++ D WID NLR E+ +E S +
Sbjct: 80 SQQFPENT----TKIIVMQENPKQSKFMKTVRVCIFGDTWIDVCNLRGEE-TETSPL--- 131
Query: 191 RFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLR 250
DA RDL+IN+LFYNI S VEDL G GI DLK+ I TP+ P TF +DPLR
Sbjct: 132 ------TDAKHRDLSINALFYNITYSKVEDLVG-GIPDLKNQIIRTPIDPDLTFTEDPLR 184
Query: 251 VLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTE 294
++RAIRF R + + E + +AA KI++ERV E
Sbjct: 185 IIRAIRFYVRLGYKIHESIYEAAKLHVTD--FEEKITKERVVAE 226
>gi|66824633|ref|XP_645671.1| hypothetical protein DDB_G0271378 [Dictyostelium discoideum AX4]
gi|60473880|gb|EAL71819.1| hypothetical protein DDB_G0271378 [Dictyostelium discoideum AX4]
Length = 542
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 131/258 (50%), Gaps = 45/258 (17%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETV-LRVAGGWVRDKLLGKDCYDIDI----------- 117
I+++ E K+F L N L N + LRVAGGWVRDKLL
Sbjct: 41 IQISPEENKLFDFLKNILIFNNRNDIELRVAGGWVRDKLLDNQKQQQPQPQPQPQQQQQI 100
Query: 118 ---------ALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYD 168
AL N+ G+ F K+ E E+ +I NP++SKHLETA++ ++
Sbjct: 101 KDIDIDIDIALSNISGTNF-IKLIEEFKINKESFKKY--LIKRNPEKSKHLETASINIHG 157
Query: 169 LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIAD 228
IDF +LR + RRDLTINSLFYN+NT +ED +G G++D
Sbjct: 158 FQIDFNSLR--------------------NCLRRDLTINSLFYNLNTLKIEDHSGYGLSD 197
Query: 229 LKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFD-FILDEELKKAAASDEVKAALAAKIS 287
L++ I TPL P T LDDPLR R IRF +RF F ++++L + K ++ K+S
Sbjct: 198 LENSIIRTPLEPLKTLLDDPLRAFRVIRFASRFQGFQIEQQLYNTIKFNLNKQLISNKVS 257
Query: 288 RERVGTEIDLMVSGNQPV 305
+ER+ E LM+S V
Sbjct: 258 KERIYKEFHLMMSNKSSV 275
>gi|123438730|ref|XP_001310144.1| polyA polymerase family protein [Trichomonas vaginalis G3]
gi|121891901|gb|EAX97214.1| polyA polymerase family protein [Trichomonas vaginalis G3]
Length = 458
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 175/351 (49%), Gaps = 30/351 (8%)
Query: 93 ETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSN 152
+ ++R+AGGWVRDK++G++ DIDIA+ +EF+ + L + ++ +N
Sbjct: 37 KVIVRIAGGWVRDKIMGRENDDIDIAISGATCNEFSDAMVSVLGPNTKRV-----LLEAN 91
Query: 153 PDQSKHLETATMKLY-DLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFY 211
+Q KH++TA + L+ D W+D +LR YSE ++ GTA A RD ++N++F+
Sbjct: 92 HEQLKHIDTARVCLFHDFWLDICSLRSALYSEGEKLE----GTAVSAALHRDFSMNAIFF 147
Query: 212 NINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
N+ T +ED G+ +K I TP+P F DDP R++R RF A++DF +D ++ +
Sbjct: 148 NVQTMKIEDYVN-GVQSIKDKIIRTPIPAMQDFTDDPNRIIRCFRFVAKYDFKIDPQIYE 206
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEV 331
A ++ I+++RV TE+ ++ + A+ ++ + VF +PE
Sbjct: 207 AIP--KIIPLFMRNIAKDRVATELIKLMHSDSSFLALENLINSGMLNPVF------DPES 258
Query: 332 LEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNT-TYKD--NKGKKI 388
L + T L Q+ + + + +AA+FLP + T D K K
Sbjct: 259 LWSLDKEET--LKRIRRAHQI--EPNLEGENKMILYFAAIFLPLVDKDTIPDPAKKNKFT 314
Query: 389 PVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQW 439
V+Y ++K + A+ V IH SL+ ++ E +V G++
Sbjct: 315 SAVHYAIVRAMKLQNVLADNVKKIHL----GFSLVEAIYKGELNRVTGGRF 361
>gi|71745142|ref|XP_827201.1| tRNA nucleotidyltransferase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831366|gb|EAN76871.1| tRNA nucleotidyltransferase, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 441
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 115/192 (59%), Gaps = 7/192 (3%)
Query: 148 VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE-NSRIPTMRFGTAEEDAYRRDLTI 206
VI NP+ SKH+ETAT+ +YD I+F LR ++Y+ +SRIP +R T EDA RRD T+
Sbjct: 8 VIRVNPELSKHIETATVCVYDTPIEFCALRHDEYTRSDSRIPVVRPATTVEDALRRDYTV 67
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR---FDF 263
N+LFYN++T VED T G+ DL + PL PK T DDPLR+LR +RF + F
Sbjct: 68 NALFYNLHTKEVEDYT-TGLEDLDRRILRCPLDPKETLTDDPLRLLRGVRFVGQLGELGF 126
Query: 264 ILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
+LDE + + + +K + K+SRERVG E+ M+SG K + + L L V +
Sbjct: 127 VLDESIFRCVDKELLK-KVTLKVSRERVGKELVKMLSGPFAEKCIETLHELNLLREVILV 185
Query: 324 PLQVEPEVLEGC 335
L ++ +GC
Sbjct: 186 ELHLKSSK-KGC 196
>gi|295134943|ref|YP_003585619.1| tRNA nucleotidyltransferase [Zunongwangia profunda SM-A87]
gi|294982958|gb|ADF53423.1| tRNA nucleotidyltransferase [Zunongwangia profunda SM-A87]
Length = 483
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 155/301 (51%), Gaps = 32/301 (10%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLS 136
+IF + L++ V GG+VRD +L + + DIDI G + A KV++ L
Sbjct: 18 QIFKVIAKATEELQLDSY--VIGGFVRDFILQRGNAKDIDIVAVGS-GIDLALKVSQLL- 73
Query: 137 ATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGT 194
P P K+ TA ++ +D+ I+FV R E Y+E+SR P + GT
Sbjct: 74 -------------PHKPKVQVFKNYGTAMLRAFDMDIEFVGARKESYAEDSRNPVVENGT 120
Query: 195 AEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVL 252
E+D RRD TIN+L ++NTS+ DL G+ADLK I TPL P T+ DDPLR+L
Sbjct: 121 LEDDQNRRDFTINALALSLNTSNYGDLLDPFGGLADLKSQLIRTPLEPGVTYSDDPLRML 180
Query: 253 RAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
RAIRF ++ +F+++++ A + + IS+ER+ E+ ++ N+P K +
Sbjct: 181 RAIRFASQLNFVIEKKSLDAIKEHHKRIKI---ISKERITEELHKILLSNRPSKGFALLH 237
Query: 313 GLTLFWIVFKLPLQVEPEVLEGC-EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAAL 371
L I+ LP E LEG E+ + D W +++ + + N D L ++AAL
Sbjct: 238 KTKLLKII--LP---ELTALEGIDEIEGQRHKDNFWHTLEVVDNISQNTDNLWL-RWAAL 291
Query: 372 F 372
Sbjct: 292 L 292
>gi|410074459|ref|XP_003954812.1| hypothetical protein KAFR_0A02390 [Kazachstania africana CBS 2517]
gi|372461394|emb|CCF55677.1| hypothetical protein KAFR_0A02390 [Kazachstania africana CBS 2517]
Length = 421
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 125/231 (54%), Gaps = 10/231 (4%)
Query: 70 IELTDTETKIFSCL---LNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSE 126
I L+D E + S L + L+ F+ + + GGWVRDKLLG + +DIDI + + G +
Sbjct: 3 INLSDDEEHLCSYLRDFIRDLKQFHWVKIW-ITGGWVRDKLLGYNPHDIDIVVIGLTGPD 61
Query: 127 FATKVAEYLS-ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENS 185
F + +Y S + PS +I +N ++ K + A KL+D+ +DF + +S
Sbjct: 62 FMNHLKKYHSLHYNQYLPSH--IIKANSEKGKAYDIAATKLFDITLDFTGIPLTTEFGDS 119
Query: 186 RIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFL 245
P +D Y RDLTIN+L+YNI +ED + G++D+++ I T P T
Sbjct: 120 ISPR---AAILQDVYSRDLTINTLYYNIFNGKIEDYSKEGLSDIENELIDTVALPYETLA 176
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEID 296
DPLRVLR IRF + F + +E KA + ++ L+ +++RER EI+
Sbjct: 177 ADPLRVLRIIRFATFYRFKILQETFKAMQNSDIHYLLSKRVARERFSKEIE 227
>gi|149370611|ref|ZP_01890300.1| tRNA nucleotidyltransferase [unidentified eubacterium SCB49]
gi|149356162|gb|EDM44719.1| tRNA nucleotidyltransferase [unidentified eubacterium SCB49]
Length = 474
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 132/243 (54%), Gaps = 27/243 (11%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLSA 137
IF+ + + NL+T V GG+VRD LL + D DIDI G A +V++ L
Sbjct: 14 IFNSVSKAASNLNLDTY--VIGGFVRDYLLDRGDAKDIDIVAVGS-GITLAKEVSKLL-- 68
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P P+ S K TA +K ++ ++FV R E YSENSR P + GT
Sbjct: 69 ------------PGKPNVSVFKSYGTAMLKSSNIELEFVGARKESYSENSRNPAVENGTL 116
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
++D RRD TIN+L ++N ++ DL G+ DL + I TPL P T+ DDPLR+LR
Sbjct: 117 QDDQNRRDFTINALALSLNEATYGDLLDPFNGVEDLHNKIIRTPLDPDITYSDDPLRMLR 176
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVK--AMTHI 311
AIRF + DF +++E +A + + + IS+ER+ TEI+ +++ P K A+ H
Sbjct: 177 AIRFATQLDFTIEKESLEAITRNADRITI---ISKERIVTEINKILNAPVPSKGFALLHK 233
Query: 312 CGL 314
GL
Sbjct: 234 TGL 236
>gi|409124048|ref|ZP_11223443.1| tRNA nucleotidyltransferase [Gillisia sp. CBA3202]
Length = 476
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 152/304 (50%), Gaps = 40/304 (13%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLSA 137
IF + + NLE+ V GG+VRD LL + + DIDI G E AT+V+ L
Sbjct: 15 IFKIISQAAENLNLESY--VIGGFVRDFLLDRGEPKDIDIVAIGS-GIELATEVSRLL-- 69
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P+NP K TA ++ +DL I+FV R E Y+E+SR P + G+
Sbjct: 70 ------------PNNPKVQIFKTYGTAMLRAFDLEIEFVGARKESYTEDSRNPVVEDGSL 117
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
E+D RRD TIN+L N+ DL GI DLKH I TPL P T+ DDPLR+LR
Sbjct: 118 EDDQKRRDFTINALALNLGEDHFGDLVDPFNGIEDLKHQLIQTPLDPDITYSDDPLRMLR 177
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVK--AMTHI 311
AIRF + F ++ K+ AS IS+ER+ E++ ++ +P A+ H
Sbjct: 178 AIRFATQLHFKIE---PKSLASISKNKNRIKIISKERIVEELNKILLSEKPSIGFALLHK 234
Query: 312 CGLTLFWIVFKLPLQVEPEV--LEGC-EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQY 368
GL LP+ + P++ LEG E+ + D W +++ + N D L ++
Sbjct: 235 TGL--------LPI-ILPQLTALEGIEEIEGQKHKDNFWHTLEVVDNIAENTDDLWL-RW 284
Query: 369 AALF 372
AAL
Sbjct: 285 AALL 288
>gi|342884990|gb|EGU85106.1| hypothetical protein FOXB_04385 [Fusarium oxysporum Fo5176]
Length = 475
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 86/146 (58%)
Query: 176 LRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIV 235
+R E Y + R P FGTAEEDA+RRD T+N+LF+++ V D T G+ DL+ G +
Sbjct: 160 VRKEVYDGDCRTPETEFGTAEEDAFRRDATVNALFFDLQNRKVADFTRGGLDDLEAGIMR 219
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
TPL P+ TFLDDPLRVLR IR G++ F LD E E+ AL K+SRERVG E+
Sbjct: 220 TPLEPRQTFLDDPLRVLRLIRIGSKLGFTLDPEALSCIKEHEIHVALDEKVSRERVGIEV 279
Query: 296 DLMVSGNQPVKAMTHICGLTLFWIVF 321
M+ + + I L+ VF
Sbjct: 280 FKMMKNRNLELSFSLIHEANLYGTVF 305
>gi|225010662|ref|ZP_03701132.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Flavobacteria bacterium MS024-3C]
gi|225005215|gb|EEG43167.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Flavobacteria bacterium MS024-3C]
Length = 475
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 154/302 (50%), Gaps = 36/302 (11%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSA 137
IF+ L + E V GG+VRD LL + DID+ + G A K++E L
Sbjct: 14 IFNTLSDCAEALGCEAY--VIGGFVRDYLLERGSPKDIDVVVLGS-GISLAKKLSEAL-- 68
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P++P+ + K+ TA +K DL ++FV R E Y+ +SR P + G+
Sbjct: 69 ------------PNSPEVTVFKNYGTAMLKYQDLVLEFVGARKESYTHDSRNPVVENGSL 116
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
E+D RRD TIN+L +N + L G+ LK+ +IVTPL P TF DDPLR+LR
Sbjct: 117 EDDQNRRDFTINALAIGLNKDNYGVLVDPFNGLDALKNKRIVTPLSPGITFSDDPLRMLR 176
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICG 313
AIRF ++ +F +D E +A + ++ IS+ER+ EI+ M+S P I G
Sbjct: 177 AIRFASQLNFTIDAEALEAITVQRDRISI---ISKERIVDEINKMMSSPMP------ILG 227
Query: 314 LTLFWIVFKLPLQVEPEV--LEGC-EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAA 370
L LPL + PE+ LEG E+ + D W +++ + + N + L ++AA
Sbjct: 228 FELMHKTGLLPL-ILPELSALEGIEEVEGQKHKDNFWHTLEVVDNISKNTENVWL-RWAA 285
Query: 371 LF 372
L
Sbjct: 286 LL 287
>gi|189462187|ref|ZP_03010972.1| hypothetical protein BACCOP_02869 [Bacteroides coprocola DSM 17136]
gi|189431090|gb|EDV00075.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Bacteroides coprocola DSM 17136]
Length = 501
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 125/241 (51%), Gaps = 22/241 (9%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSA 137
KIF+ + +T LE V GG+VRD L + DID+ + +GS ++AE A
Sbjct: 39 KIFNLISDTADELGLECY--VVGGYVRDIFLNRPSKDIDVVV---VGS--GIEIAE---A 88
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
G G V K+ TA +K +DL ++FV R E YS +SR P + GT E+
Sbjct: 89 FGRKLGRGAHV-----SVFKNFGTAQVKYHDLEVEFVGARKESYSHDSRKPVVENGTLED 143
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
D RRD TIN+L +N S +L G+ DLK I TPL P TF DDPLR++R I
Sbjct: 144 DQNRRDFTINALAVCLNKSRYGELVDPFGGLDDLKERTIRTPLDPDITFSDDPLRMMRCI 203
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CG 313
RF + +F +++E A + + + ISRER+ E++ ++ P K + CG
Sbjct: 204 RFATQLNFFIEDETFDALERNRERIKI---ISRERIADELNKILLSPVPSKGFVDLDRCG 260
Query: 314 L 314
L
Sbjct: 261 L 261
>gi|126662057|ref|ZP_01733056.1| tRNA nucleotidyltransferase [Flavobacteria bacterium BAL38]
gi|126625436|gb|EAZ96125.1| tRNA nucleotidyltransferase [Flavobacteria bacterium BAL38]
Length = 471
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 132/251 (52%), Gaps = 25/251 (9%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEY 134
E KIF + + NLE V GG+VRD LL +D DIDI G E A KV++
Sbjct: 8 EHKIFKIISQAAQELNLECY--VIGGFVRDILLNRDHKKDIDIVAVGS-GIELALKVSQ- 63
Query: 135 LSATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRF 192
+IP +P K+ TA ++ D+ ++FV R E Y+ +SR P +
Sbjct: 64 -------------LIPFHPKVQVFKNYGTAMLRYDDIDVEFVGARKESYTHDSRNPLVEN 110
Query: 193 GTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLR 250
GT ++D RRD TIN+L +++N + +L G+ DLK+ I TPL P T+ DDPLR
Sbjct: 111 GTLKDDQERRDFTINALAFSLNAENFGNLVDPFNGVEDLKNKIIKTPLNPDITYSDDPLR 170
Query: 251 VLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTH 310
++RAIRF + +F ++ E KA + ++ + + IS ER+ E+ +++ +P H
Sbjct: 171 MMRAIRFATQLNFEIESESLKAISKNKDRINI---ISGERIVDELHKILASEKPSIGFLH 227
Query: 311 ICGLTLFWIVF 321
+ L I+
Sbjct: 228 LFQTGLLEIIL 238
>gi|326336252|ref|ZP_08202424.1| polyA polymerase family protein [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691761|gb|EGD33728.1| polyA polymerase family protein [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 476
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 148/285 (51%), Gaps = 38/285 (13%)
Query: 98 VAGGWVRDKLLGKD-CYDIDIALDNMMGS--EFATKVAEYLSATGETAPSGFGVIPSNPD 154
V GG+VRD LL + DIDI +GS E A KVA L P+NP
Sbjct: 28 VVGGFVRDLLLKRGIAKDIDIV---TLGSGIELAEKVAAQL--------------PNNPK 70
Query: 155 QS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYN 212
S K+ TA +K + I+FV R E Y E+SR P + GT +D RRD TIN+L +
Sbjct: 71 ISVFKNFGTAMIKTDSIDIEFVGARKESYREDSRKPLVENGTLADDQNRRDFTINTLAIS 130
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
+N S +L GI DL++ I TPL P T+ DDPLR+LRAIRF + +F ++E+
Sbjct: 131 LNQDSFGELVDPFGGINDLQNQIIRTPLEPNITYSDDPLRMLRAIRFATQLNFQIEEKSL 190
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPE 330
+A A ++ + + IS ER+ E++ +++ N+P G L + L L + PE
Sbjct: 191 QAIADNKERLKI---ISNERIAEELNKILASNKPS------IGFKLLYETGLLSL-ILPE 240
Query: 331 V--LEGC-EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALF 372
+ L+G E + D W +++ + + N + L ++AAL
Sbjct: 241 LVALQGVDEKEGQRHKDNFWHTLEVVDNISLNTNDLWL-RWAALL 284
>gi|429738337|ref|ZP_19272149.1| HDIG domain protein [Prevotella saccharolytica F0055]
gi|429160533|gb|EKY02994.1| HDIG domain protein [Prevotella saccharolytica F0055]
Length = 478
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 118/240 (49%), Gaps = 22/240 (9%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT 138
IF + + NLE V GG+VRD L + DIDI + +GS KVA L +
Sbjct: 17 IFHRISSAADSLNLECY--VVGGYVRDLFLERTSPDIDIVV---VGS--GIKVANALCKS 69
Query: 139 GETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEED 198
P + N TA +K + I+FV R E YS +SR P + GT E+D
Sbjct: 70 --LGPKARISVFRN------FGTAQVKYKGMEIEFVGARKESYSHDSRKPIVEDGTLEDD 121
Query: 199 AYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIR 256
RRD TIN+L +N L G+ DL+ G I TPL P TF DDPLR+LR IR
Sbjct: 122 QNRRDFTINALAVCLNAPRFGQLVDPFDGLVDLEDGIIRTPLDPDITFSDDPLRMLRCIR 181
Query: 257 FGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HICGL 314
F R F +DEE A + + + IS ER+ E++ M+ QP +A H CGL
Sbjct: 182 FATRLRFFIDEETFDALTRNAERIKI---ISAERISDELNKMMMTEQPSRAFVDLHRCGL 238
>gi|86142260|ref|ZP_01060770.1| tRNA nucleotidyltransferase [Leeuwenhoekiella blandensis MED217]
gi|85831012|gb|EAQ49469.1| tRNA nucleotidyltransferase [Leeuwenhoekiella blandensis MED217]
Length = 476
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 130/238 (54%), Gaps = 27/238 (11%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK-DCYDIDI-ALDNMMGSEFATKVAE 133
+ KIF + NLET V GG+VRD LL + DIDI AL + G E A +VA
Sbjct: 11 QPKIFDTITQASEELNLETY--VIGGYVRDFLLKRGSAKDIDIVALGS--GIELAERVA- 65
Query: 134 YLSATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
++P P K TA ++ D+ ++FV R E Y+ENSR P +
Sbjct: 66 -------------SLLPHKPKVQVFKTYGTAMLRDGDIEVEFVGARKESYNENSRNPVVE 112
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPL 249
G+ E+D RRD TIN+L ++N S++ +L G+ DL+ I TPL P T+ DDPL
Sbjct: 113 NGSLEDDQNRRDFTINALALSLNKSTLGNLIDPFEGLVDLEREIIRTPLDPDITYSDDPL 172
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
R++RAIRF + DF+++ + +A ++++ + + I++ER+ E++ ++ P K
Sbjct: 173 RMMRAIRFATQLDFMIERKSLEAISANKDRIKI---ITKERIVDELNKIMLSKTPSKG 227
>gi|373457364|ref|ZP_09549131.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Caldithrix abyssi DSM 13497]
gi|371719028|gb|EHO40799.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Caldithrix abyssi DSM 13497]
Length = 461
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 124/252 (49%), Gaps = 27/252 (10%)
Query: 75 TETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIAL--DNMMGSEFATKVA 132
T ++F + + R N + + V GG+VRD LLGK DID + D M +FA ++
Sbjct: 2 THEELFKKIYESARKCNYK--IYVVGGYVRDLLLGKKVKDIDFVVVGDAM---KFAQQLK 56
Query: 133 EYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRF 192
+ L FG T + Y ++FVN R E YS++SR P +
Sbjct: 57 KDLHLRTLVQYPRFG-------------TFMTRYYGYQLEFVNAREESYSQDSRKPVTKQ 103
Query: 193 GTAEEDAYRRDLTINSLFYNI---NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
D RRD TIN+L +I N + D+ G DLK G I TPL P TF DDPL
Sbjct: 104 ADLHSDLSRRDFTINTLAMDISPENFGKIIDVYN-GQQDLKAGIIRTPLEPAKTFSDDPL 162
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
R+LRAIRF AR DF ++E KA ++ + + IS+ER+ E + ++ +P + M
Sbjct: 163 RMLRAIRFAARLDFTIEENTFKAIQANAKRLEI---ISQERITDEFNKILMAEKPSRGMR 219
Query: 310 HICGLTLFWIVF 321
+ L + F
Sbjct: 220 LLDASGLLQVFF 231
>gi|163752814|ref|ZP_02159938.1| tRNA nucleotidyltransferase [Kordia algicida OT-1]
gi|161326546|gb|EDP97871.1| tRNA nucleotidyltransferase [Kordia algicida OT-1]
Length = 474
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 122/233 (52%), Gaps = 29/233 (12%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLSA 137
IFS + LET V GG+VRD LL + D DID+ G E A KVA L
Sbjct: 11 IFSTISKAATELQLETY--VIGGFVRDFLLKRGDAKDIDVVAVGS-GIELAKKVASLL-- 65
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P+ P K+ TA +K ++ ++FV R E Y SR P + GT
Sbjct: 66 ------------PNKPKVQVFKNYGTAMVKTKEIEVEFVGARKESYERGSRNPAVENGTL 113
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
++D RRD +IN++ ++N + DL G+ DLK+ +IVTPL P T+ DDPLR++R
Sbjct: 114 QDDQNRRDFSINAMALSLNEKTFGDLLDPFGGLEDLKNKRIVTPLDPDITYSDDPLRMMR 173
Query: 254 AIRFGARFDFILDEELKKAAA--SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
AIRF + DF +D +A SD +K IS+ER+ E++ ++ N+P
Sbjct: 174 AIRFATQLDFKIDPVSLEAITRNSDRIKI-----ISKERIVVELNKILMSNKP 221
>gi|409100595|ref|ZP_11220619.1| polynucleotide adenylyltransferase [Pedobacter agri PB92]
Length = 468
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 119/226 (52%), Gaps = 20/226 (8%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ + +GS +Y A G+ + + K
Sbjct: 26 VIGGFVRDLFLNRPSKDIDVVV---VGSGI-----DYAEAVGKKLNTKVAIF-------K 70
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA +K DL ++FV R E Y +SR P + GT ++D RRD TIN+L N+N
Sbjct: 71 NFGTANIKFQDLEVEFVGARKESYRSDSRKPIVEDGTLQDDQLRRDFTINALALNLNAKH 130
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ DL++ I TPL P+ TF DDPLR++RAIRF ++ +F +D +A +
Sbjct: 131 FGELLDPFEGVKDLENKLIRTPLDPEITFSDDPLRMMRAIRFASQLNFSIDPAALQAIKA 190
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ + ++ +S+ER+ E++ ++ P H+ L I+F
Sbjct: 191 QKKRISI---VSKERITDEMNKIILSPLPSIGFKHLFDTGLLEIIF 233
>gi|332662823|ref|YP_004445611.1| polynucleotide adenylyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332331637|gb|AEE48738.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Haliscomenobacter hydrossis DSM 1100]
Length = 471
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 130/270 (48%), Gaps = 27/270 (10%)
Query: 71 ELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATK 130
++ DTE KI + + V GG+VRD+LL + DIDI G E A +
Sbjct: 4 KIQDTERKILEIVSQAAAKMQVPAY--VVGGYVRDRLLARPSKDIDIVCVGS-GIELAQR 60
Query: 131 VAEYLSATGE-TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
VA L T FG TA +K DL ++FV R E Y +SR P
Sbjct: 61 VAGELHPVPRITVFQRFG-------------TAMIKHRDLEVEFVGARKESYRHDSRKPA 107
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDD 247
+ G+ E+D RRD TIN+L ++N + ++ G+ DL+ I TPL P TF DD
Sbjct: 108 VEDGSLEDDQNRRDFTINALAVSLNEADFGNIIDPFDGLGDLERKIIRTPLDPGKTFSDD 167
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
PLR++RAIRF + DF+++ KA + + + + IS ER+ TE++ ++ +P
Sbjct: 168 PLRMMRAIRFATQLDFVIEPATFKAIDTYKERIKI---ISAERIATELNKIIQAPKPSVG 224
Query: 308 MTHICGLTLFWIVFKLPLQVEPEVLEGCEM 337
+ L ++F E L G E+
Sbjct: 225 FKLLFDSGLLQLIFP-----EMTALHGVEI 249
>gi|255530766|ref|YP_003091138.1| polynucleotide adenylyltransferase [Pedobacter heparinus DSM 2366]
gi|255343750|gb|ACU03076.1| Polynucleotide adenylyltransferase region [Pedobacter heparinus DSM
2366]
Length = 468
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 117/229 (51%), Gaps = 26/229 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIA-LDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
+ GG+VRD L + DIDI L N G EFA V + L S V
Sbjct: 26 IVGGYVRDIFLNRPSKDIDIVVLGN--GIEFAELVGKQLQ-------SKVAVF------- 69
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K+ TA +K DL I+FV R E Y +SR P + GT E+D RRD TIN+L ++N
Sbjct: 70 KNFGTAMLKYQDLEIEFVGARKESYRSDSRKPIVENGTIEDDQLRRDFTINALAISLNKE 129
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ L GIADL + I TPL P+ TF DDPLR++RAIRF + +F +D AAA
Sbjct: 130 NYGQLVDPFNGIADLNNKLIRTPLDPELTFSDDPLRMMRAIRFATQLNFTID-----AAA 184
Query: 275 SDEVKAALA--AKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ +K +S+ER+ E++ ++ P ++ L +VF
Sbjct: 185 INAIKKQKERIGIVSKERITDELNKIILSEVPSIGFKYLFDTGLLQLVF 233
>gi|359406453|ref|ZP_09199144.1| HDIG domain protein [Prevotella stercorea DSM 18206]
gi|357555745|gb|EHJ37368.1| HDIG domain protein [Prevotella stercorea DSM 18206]
Length = 482
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 122/243 (50%), Gaps = 15/243 (6%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL 135
+ KIF + +E L GG+VRD L + DID+ + G E A ++ + L
Sbjct: 14 DKKIFHKIGEVADAMGVECYL--VGGYVRDIFLERPTNDIDVVVVGS-GIEVAKELQKAL 70
Query: 136 SATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
+T G ++ ++ TA +K YD ++FV R E Y SR P + GT
Sbjct: 71 GKNEKT-----GRWRAHLAVYRNFGTAQIKFYDTEVEFVGARRESYDRGSRKPVVEDGTL 125
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
E+D RRD TIN++ +N + +L GI DL+ G I TPL P TF DDPLR++R
Sbjct: 126 EDDQNRRDFTINAMAVCLNKARFGELVDPFDGIYDLEDGIIRTPLDPDITFSDDPLRMMR 185
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI-- 311
+RF A+ F +DEE A + + + +S ER+ E++ ++ QP + +
Sbjct: 186 CVRFSAQLKFFIDEETFDALGRNAERIKI---VSGERIADELNKIMKTQQPSRGFVELQR 242
Query: 312 CGL 314
CGL
Sbjct: 243 CGL 245
>gi|228472020|ref|ZP_04056788.1| polyA polymerase family protein [Capnocytophaga gingivalis ATCC
33624]
gi|228276632|gb|EEK15345.1| polyA polymerase family protein [Capnocytophaga gingivalis ATCC
33624]
Length = 476
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 128/227 (56%), Gaps = 24/227 (10%)
Query: 83 LLNTLRHFNLETVLRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLSATGET 141
L++ + H N + V GG+VRD LL + DIDI +GS +AE ++A
Sbjct: 14 LISQIAHENNQECF-VVGGFVRDLLLSRGQAKDIDIV---TLGS--GISLAEKVAAE--- 64
Query: 142 APSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDA 199
+P+NP S K+ TA +K ++ I+FV R E Y E+SR P + G+ +D
Sbjct: 65 -------LPNNPKISVFKNFGTAMIKTENIDIEFVGARKESYREDSRKPIVEDGSLSDDQ 117
Query: 200 YRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRF 257
RRD TIN+L +++ S +L G+ DL++G I TPL P T+ DDPLR+LRAIRF
Sbjct: 118 NRRDFTINALALSLSKDSFGELIDPFHGVDDLQNGLIRTPLEPNVTYSDDPLRMLRAIRF 177
Query: 258 GARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ +F+++E+ +A A ++ + + IS ER+ E++ +++ P
Sbjct: 178 ATQLNFVIEEKSLQAIADNKERLKI---ISNERIAEELNKILASPTP 221
>gi|198277607|ref|ZP_03210138.1| hypothetical protein BACPLE_03829 [Bacteroides plebeius DSM 17135]
gi|198270105|gb|EDY94375.1| HDIG domain protein [Bacteroides plebeius DSM 17135]
Length = 536
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 122/241 (50%), Gaps = 22/241 (9%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSA 137
+IFS + T LE V GG+VRD L + DID+ + +GS E A
Sbjct: 70 RIFSLISETADELGLECY--VVGGYVRDIFLNRPSKDIDVVV---VGSGI-----EMAQA 119
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
G+ G V K+ TA +K D ++FV R E YS +SR P + GT E+
Sbjct: 120 FGKKLGRGAHV-----SVFKNFGTAQVKFKDTEVEFVGARKESYSHDSRKPIVEDGTLED 174
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
D RRD TIN++ +N + +L G+ DLK I TPL P TF DDPLR++R I
Sbjct: 175 DQNRRDFTINAMAVCLNKARFGELVDPFGGLDDLKERTIRTPLDPDITFSDDPLRMMRCI 234
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CG 313
RF + +F +D+E +A ++ + + ISRER+ E++ ++ P K + CG
Sbjct: 235 RFATQLNFYIDDETFEALERNKERIKI---ISRERIADELNKILLSPVPSKGFIDLDRCG 291
Query: 314 L 314
L
Sbjct: 292 L 292
>gi|326799830|ref|YP_004317649.1| polynucleotide adenylyltransferase [Sphingobacterium sp. 21]
gi|326550594|gb|ADZ78979.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Sphingobacterium sp. 21]
Length = 469
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 136/260 (52%), Gaps = 24/260 (9%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSA 137
+F L N +N E + V GG+VRD+L+ + DIDI + G EFA KV ++L+
Sbjct: 9 VFETLSNLANQYNTE--IYVIGGYVRDRLMKRPFKNDIDILVIGS-GIEFAEKVGKHLN- 64
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
T S F K+ TA ++ + I+FV R E Y +SR P + G+ E+
Sbjct: 65 ---TKVSVF----------KNFGTAMLRYDQIDIEFVGARKESYRRDSRKPIVENGSLED 111
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
D RRD T+N++ ++N + +L G+ D++ I TPL P+ATF DDPLR++RAI
Sbjct: 112 DQKRRDFTVNAMALSLNKQNFGELLDPFNGVKDIQIRTIRTPLEPEATFSDDPLRMMRAI 171
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLT 315
RF ++ F + A S + + IS+ER+ E++ ++ +P ++
Sbjct: 172 RFASQLQFKISSPTFNAIKSQRERIKI---ISKERITDELNKIICSKKPSIGFNYLFDTG 228
Query: 316 LFWIVFKLPLQVEP-EVLEG 334
L ++F L Q+ E+++G
Sbjct: 229 LLELIFPLMTQLYGVEIIDG 248
>gi|325299813|ref|YP_004259730.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Bacteroides salanitronis DSM 18170]
gi|324319366|gb|ADY37257.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Bacteroides salanitronis DSM 18170]
Length = 473
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 120/241 (49%), Gaps = 22/241 (9%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSA 137
KIFS + T LE V GG+VRD L + DID+ + +GS T AE L
Sbjct: 10 KIFSLISQTADELGLECY--VVGGYVRDIFLNRPSKDIDVVV---VGSGIQT--AEALGK 62
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
P + N TA +K +D ++FV R E YS +SR P + GT E+
Sbjct: 63 --RLGPKAHVSVFHN------FGTAQVKFFDTEVEFVGARKESYSHDSRKPVVEDGTLED 114
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
D RRD TIN+L +N + +L G+ DLK G I TPL P TF DDPLR+LR I
Sbjct: 115 DQNRRDFTINALAVCMNKARFGELIDPFGGLDDLKQGIIRTPLDPDITFSDDPLRMLRCI 174
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CG 313
RF + +F +++E A + + + IS ER+ E++ ++ P K + CG
Sbjct: 175 RFATQLNFYIEDETFNALERNRERIKI---ISYERIKDELNKILLSPIPSKGFVDLDRCG 231
Query: 314 L 314
L
Sbjct: 232 L 232
>gi|213962517|ref|ZP_03390779.1| tRNA nucleotidyltransferase [Capnocytophaga sputigena Capno]
gi|213954843|gb|EEB66163.1| tRNA nucleotidyltransferase [Capnocytophaga sputigena Capno]
Length = 469
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 123/231 (53%), Gaps = 25/231 (10%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSA 137
IF + N LE+ V GG+VRD LL K DIDI + G A KVAE L
Sbjct: 11 IFELISNISAEIPLESY--VIGGFVRDYLLKKKLPKDIDI-VSIGSGISLAEKVAEQL-- 65
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P+NP S K+ TA +K L I+FV R E Y NSR P + GT
Sbjct: 66 ------------PNNPKVSIFKNFGTAMIKADGLDIEFVGARRESYESNSRKPYVESGTL 113
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
++D RRD TIN++ +++N + DL G+ DL+ I TPL P T+ DDPLR++R
Sbjct: 114 QDDQNRRDFTINAMAFSLNKDTFGDLIDPFDGLGDLERKLIRTPLNPDITYSDDPLRMMR 173
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
AIRF + +F ++E+ KA ++ + + IS ER+ E++ +++ +P
Sbjct: 174 AIRFATQLNFEIEEQSLKAITDNKERLKI---ISNERIVEELNKILASPKP 221
>gi|371778470|ref|ZP_09484792.1| tRNA nucleotidyltransferase [Anaerophaga sp. HS1]
Length = 475
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 126/264 (47%), Gaps = 28/264 (10%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL 135
+T +F + ET V GG+VRD +L + DIDI + G E A VA+ L
Sbjct: 15 QTPVFKAISQVADSIERETY--VVGGFVRDLILKRQTTDIDIVVVGS-GIEMARAVAKKL 71
Query: 136 SATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
+ FG TA K + I+FV R E Y NSR P + GT
Sbjct: 72 GGVKVSVFKNFG-------------TAMFKYRGMEIEFVGARKESYHRNSRKPVVEDGTL 118
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
E+D RRD TIN+L ++N S L G+ D++ G I TP P TF DDPLR+LR
Sbjct: 119 EDDQNRRDFTINALALSLNEKSFGQLIDPFMGVKDIEAGIIRTPRDPVVTFSDDPLRMLR 178
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICG 313
AIRF + F ++E+ + S + + + IS+ER+ E++ M+ +P G
Sbjct: 179 AIRFATQLGFRIEEKTFEGIVSQKERLEI---ISKERITEELNKMLMAPRPS------MG 229
Query: 314 LTLFWIVFKLPLQV-EPEVLEGCE 336
L LPL + E + L+G E
Sbjct: 230 FKLLEKTGLLPLILPELQALKGVE 253
>gi|298207805|ref|YP_003715984.1| tRNA nucleotidyltransferase [Croceibacter atlanticus HTCC2559]
gi|83850443|gb|EAP88311.1| tRNA nucleotidyltransferase [Croceibacter atlanticus HTCC2559]
Length = 477
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 117/216 (54%), Gaps = 25/216 (11%)
Query: 98 VAGGWVRDKLLGK-DCYDIDIA-LDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
V GG+VRD LL + + DID+ + N G A KVA L P+ P
Sbjct: 34 VIGGFVRDFLLKRGNAKDIDVVTIGN--GIALAKKVANLL--------------PNKPKV 77
Query: 156 S--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNI 213
K TA ++ D+ ++FV R E YSE+SR P++ GT E+D RRD TIN+L ++
Sbjct: 78 KVFKTYGTAMLETGDIEVEFVGARKESYSEDSRNPSVEPGTLEDDQNRRDFTINALALSL 137
Query: 214 NTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
N + D+ GI DL +G I TPL P T+ DDPLR+LRAIRF ++ DF + E+
Sbjct: 138 NKENFGDILDPFNGIEDLANGVIKTPLNPDITYSDDPLRMLRAIRFASQLDFFIQEDSLN 197
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
A + + + I++ERV TEI+ ++ P K
Sbjct: 198 AITRNNERIKI---ITKERVVTEINKILLSTTPSKG 230
>gi|374375024|ref|ZP_09632682.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Niabella soli DSM 19437]
gi|373231864|gb|EHP51659.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Niabella soli DSM 19437]
Length = 478
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 130/260 (50%), Gaps = 23/260 (8%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I+L DTE I + + + N E+ L GG+VRDKLLG+ D DI G E A
Sbjct: 3 IQLDDTERTIINKVAAAAQQLNQESYL--VGGFVRDKLLGRATKDADIVTIGD-GIELAH 59
Query: 130 KVAEYLSATGETAP-SGFG-----VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
VA E FG V +P++ + +D I+FV R E Y
Sbjct: 60 AVAALFQPRPEVNYFKNFGTAHIRVAAPSPEKKDNF-------FD--IEFVGARKESYRH 110
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
NSR P + GT E+D RRD TIN++ ++N L G L+ KI+TPL P
Sbjct: 111 NSRKPEVSPGTLEDDQNRRDFTINAMAISLNKHDFGKLVDPFYGQQHLEEKKIITPLEPD 170
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++RAIRF ++ +F+++E + A ++ + + IS+ER+ E++ ++
Sbjct: 171 QTFSDDPLRMMRAIRFASQLNFVIEENTLASIAKNKDRIRI---ISQERITDELNKIILS 227
Query: 302 NQPVKAMTHICGLTLFWIVF 321
++P + L I+F
Sbjct: 228 DKPSIGFDLLYKTGLLKIIF 247
>gi|423232767|ref|ZP_17219166.1| hypothetical protein HMPREF1063_04986 [Bacteroides dorei
CL02T00C15]
gi|423242535|ref|ZP_17223642.1| hypothetical protein HMPREF1065_04265 [Bacteroides dorei
CL03T12C01]
gi|423247800|ref|ZP_17228847.1| hypothetical protein HMPREF1064_05053 [Bacteroides dorei
CL02T12C06]
gi|392622999|gb|EIY17108.1| hypothetical protein HMPREF1063_04986 [Bacteroides dorei
CL02T00C15]
gi|392631032|gb|EIY25010.1| hypothetical protein HMPREF1064_05053 [Bacteroides dorei
CL02T12C06]
gi|392639019|gb|EIY32849.1| hypothetical protein HMPREF1065_04265 [Bacteroides dorei
CL03T12C01]
Length = 500
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 133/266 (50%), Gaps = 33/266 (12%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
KIF + T LE V GG+VRD L + DID+ + +GS E
Sbjct: 37 NKIFKLISETADELGLECY--VVGGYVRDIFLARPSKDIDVVV---VGSGI-----EMAQ 86
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
A G+ G V K+ TA +K +D ++FV R E YS +SR P + GT E
Sbjct: 87 ALGKKLGRGAHV-----SVFKNFGTAQVKYHDTEVEFVGARKESYSHDSRKPVVEDGTLE 141
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN++ +N + +L G+ DLK I TPL P TF DDPLR++R
Sbjct: 142 DDQNRRDFTINAMAVCLNKARFGELVDPFNGLDDLKERTIRTPLDPDITFSDDPLRMMRC 201
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--C 312
+RF + +F +D+ +A + ++ + + IS+ER+ E++ ++ P K + C
Sbjct: 202 VRFATQLNFYIDDTTFEALSRNKERIHI---ISKERIADELNKILLAPIPSKGFIELDRC 258
Query: 313 GLTLFWIVFKLPLQVEPEV--LEGCE 336
GL LPL + PE+ L+G E
Sbjct: 259 GL--------LPL-IFPELVALQGVE 275
>gi|212690796|ref|ZP_03298924.1| hypothetical protein BACDOR_00283 [Bacteroides dorei DSM 17855]
gi|212666673|gb|EEB27245.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Bacteroides dorei DSM 17855]
Length = 500
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 133/266 (50%), Gaps = 33/266 (12%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
KIF + T LE V GG+VRD L + DID+ + +GS E
Sbjct: 37 NKIFKLISETADELGLECY--VVGGYVRDIFLARPSKDIDVVV---VGSGI-----EMAQ 86
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
A G+ G V K+ TA +K +D ++FV R E YS +SR P + GT E
Sbjct: 87 ALGKKLGRGAHV-----SVFKNFGTAQVKYHDTEVEFVGARKESYSHDSRKPVVEDGTLE 141
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN++ +N + +L G+ DLK I TPL P TF DDPLR++R
Sbjct: 142 DDQNRRDFTINAMAVCLNKARFGELVDPFNGLDDLKERTIRTPLDPDITFSDDPLRMMRC 201
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--C 312
+RF + +F +D+ +A + ++ + + IS+ER+ E++ ++ P K + C
Sbjct: 202 VRFATQLNFYIDDTTFEALSRNKERIHI---ISKERIADELNKILLAPIPSKGFIELDRC 258
Query: 313 GLTLFWIVFKLPLQVEPEV--LEGCE 336
GL LPL + PE+ L+G E
Sbjct: 259 GL--------LPL-IFPELVALQGVE 275
>gi|227537511|ref|ZP_03967560.1| tRNA adenylyltransferase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242648|gb|EEI92663.1| tRNA adenylyltransferase [Sphingobacterium spiritivorum ATCC 33300]
Length = 472
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 136/261 (52%), Gaps = 26/261 (9%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSA 137
IFS + + + + E V GG+VRD+++G+ D+DI + G EFA K+ E L+
Sbjct: 9 IFSLIKDLAQQTSTECY--VIGGYVRDRIMGRPFKNDVDIVVIGS-GIEFADKLGERLN- 64
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAE 196
T T FG M +YD L I+FV R E Y +SR P + GT E
Sbjct: 65 TKVTVYKSFG--------------TAMLVYDGLNIEFVGARKESYRSDSRKPIVENGTLE 110
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN++ Y++N + L GI D++ I TPL P+ TF DDPLR++RA
Sbjct: 111 DDQNRRDFTINAMAYSLNAHNYGALLDPFNGIEDIEQRVIRTPLAPQETFSDDPLRMMRA 170
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGL 314
IRF ++ F +D +A S + ++ IS+ER+ E++ ++ +P ++
Sbjct: 171 IRFASQLGFKIDIHTIEAIYSTRERISI---ISKERITDELNKIILSEKPSVGFKYLFDT 227
Query: 315 TLFWIVFKLPLQVEP-EVLEG 334
L ++F Q+ +++EG
Sbjct: 228 GLLELIFPAMYQLHGVDIVEG 248
>gi|270340141|ref|ZP_06007176.2| polyA polymerase [Prevotella bergensis DSM 17361]
gi|270332525|gb|EFA43311.1| polyA polymerase [Prevotella bergensis DSM 17361]
Length = 509
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 114/222 (51%), Gaps = 22/222 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGE-TAPSGFGVIPSNPDQS 156
V GG+VRD L + DID+ + G E ATK+ + L T FG
Sbjct: 36 VVGGYVRDLFLQRPSDDIDVVVVGS-GIEVATKLRQLLGGKAHLTVFRNFG--------- 85
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA +K + ++FV R E YS +SR P + GT E+D RRD TIN++ +N
Sbjct: 86 ----TAQVKFRGIEVEFVGARKESYSHDSRKPHVEDGTLEDDQNRRDFTINAMAVCLNRE 141
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L G+AD++ G I TPL P TF DDPLR++R +RF + F +++E +A
Sbjct: 142 RFGELVDPFDGLADMEDGIIRTPLDPDITFSDDPLRMMRCVRFATQLKFYIEDETFEAL- 200
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
E A IS ER+ TE++ ++ +QP + + CGL
Sbjct: 201 --ERNAERIKIISGERINTELNKIMLSDQPSRGFVDLQRCGL 240
>gi|149278885|ref|ZP_01885020.1| tRNA nucleotidyltransferase [Pedobacter sp. BAL39]
gi|149230504|gb|EDM35888.1| tRNA nucleotidyltransferase [Pedobacter sp. BAL39]
Length = 468
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 122/246 (49%), Gaps = 24/246 (9%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIA-LDNMMGSEFATKVAEYLSA 137
+F L N +T V GG+VRD L + DIDI L N G +FA A
Sbjct: 9 VFKVLANIAH--TQQTEAYVIGGYVRDIFLSRPSKDIDIVVLGN--GIDFA-------EA 57
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
G + V K+ TA +K DL I+FV R E Y +SR P + GT ++
Sbjct: 58 AGRQLRTKVAVF-------KNFGTAMLKTQDLEIEFVGARKESYRADSRKPIVENGTIQD 110
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
D RRD TIN+L ++N + L GI DLK+ I TPL P+ TF DDPLR++RAI
Sbjct: 111 DQLRRDFTINALAISLNADNYAALVDPFDGITDLKNKLIRTPLDPEITFSDDPLRMMRAI 170
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLT 315
RF A+ F +D + +A + + + +S+ER+ E++ ++ P ++
Sbjct: 171 RFAAQLGFSIDHQAIEAIKKQKERIGI---VSKERITDELNKIILSKLPSVGFKYLFDTG 227
Query: 316 LFWIVF 321
L ++F
Sbjct: 228 LLHLIF 233
>gi|413942388|gb|AFW75037.1| hypothetical protein ZEAMMB73_927084 [Zea mays]
Length = 410
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 104 RDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETAT 163
+ +LLGKD DIDIALDNM G F KV EY GE G GVI NPDQSKHLETA
Sbjct: 94 QKELLGKDSADIDIALDNMTGQNFCEKVNEYSKLIGEQQ-KGIGVIQCNPDQSKHLETAR 152
Query: 164 MKLYDLWIDFVNLRCEDYSENSRIPTMRF 192
M + D+WIDFVNLR E Y+ENSRIPTM +
Sbjct: 153 MLILDIWIDFVNLRSETYTENSRIPTMNY 181
>gi|237708182|ref|ZP_04538663.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229457735|gb|EEO63456.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 474
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 133/266 (50%), Gaps = 33/266 (12%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
KIF + T LE V GG+VRD L + DID+ + +GS E
Sbjct: 11 NKIFKLISETADELGLECY--VVGGYVRDIFLARPSKDIDVVV---VGSGI-----EMAQ 60
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
A G+ G V K+ TA +K +D ++FV R E YS +SR P + GT E
Sbjct: 61 AFGKKLGRGAHV-----SVFKNFGTAQVKYHDTEVEFVGARKESYSHDSRKPVVEDGTLE 115
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN++ +N + +L G+ DLK I TPL P TF DDPLR++R
Sbjct: 116 DDQNRRDFTINAMAVCLNKARFGELVDPFNGLDDLKERTIRTPLDPDITFSDDPLRMMRC 175
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--C 312
+RF + +F +D+ +A + ++ + + IS+ER+ E++ ++ P K + C
Sbjct: 176 VRFATQLNFYIDDTTFEALSRNKERIHI---ISKERIADELNKILLAPIPSKGFIELDRC 232
Query: 313 GLTLFWIVFKLPLQVEPEV--LEGCE 336
GL LPL + PE+ L+G E
Sbjct: 233 GL--------LPL-IFPELVALQGVE 249
>gi|224025809|ref|ZP_03644175.1| hypothetical protein BACCOPRO_02551 [Bacteroides coprophilus DSM
18228]
gi|224019045|gb|EEF77043.1| hypothetical protein BACCOPRO_02551 [Bacteroides coprophilus DSM
18228]
Length = 477
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
KIFS + T LE GG+VRD L + DIDI + +GS E
Sbjct: 9 NKIFSLISKTADEMGLECY--AVGGYVRDIFLNRPSKDIDIVV---VGSGI-----EIAQ 58
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
A G+ G V K+ TA +K +D ++FV R E YS +SR P + GT E
Sbjct: 59 AFGKKLGRGAHV-----SVFKNFGTAQVKYHDTEVEFVGARKESYSHDSRKPIVENGTLE 113
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN++ +N + +L G+ DLK I TPL P TF DDPLR++R
Sbjct: 114 DDQNRRDFTINAMAVCLNQARFGELVDPFGGMEDLKERIIRTPLDPDITFSDDPLRMMRC 173
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--C 312
+RF + +F +++E A ++ + + ISRER+ E++ ++ P K + C
Sbjct: 174 VRFATQLNFYIEDETFAALERNKERIKI---ISRERIADELNKILLSPIPSKGFVELDRC 230
Query: 313 GL 314
GL
Sbjct: 231 GL 232
>gi|374594370|ref|ZP_09667375.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Gillisia limnaea DSM 15749]
gi|373872445|gb|EHQ04442.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Gillisia limnaea DSM 15749]
Length = 474
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 150/301 (49%), Gaps = 35/301 (11%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLS 136
KI SC L LE+ V GG+VRD +L + D DIDI G A KV+E L
Sbjct: 17 KIISCATEEL---GLESY--VIGGFVRDHILQRGDPKDIDIVAVGS-GIVLAKKVSELL- 69
Query: 137 ATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGT 194
P P K+ TA ++ +D+ I+FV R E Y+E+SR P + G+
Sbjct: 70 -------------PHQPKVQIFKNYGTAMLRAFDMEIEFVGARTESYNEDSRNPMVENGS 116
Query: 195 AEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVL 252
E+D RRD TIN+L ++N + +L G+ DL+ I TPL P T+ DDPLR+L
Sbjct: 117 LEDDQNRRDFTINALALSLNEKNFGELIDPFDGLGDLESQLIKTPLDPDITYSDDPLRML 176
Query: 253 RAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
RAIRF + F ++ + +A + + + + IS ER+ E+ ++ +P K + +
Sbjct: 177 RAIRFATQLGFKIETQSMEAISRNNERIKI---ISGERIVDELHKILLSKKPSKGFSLLH 233
Query: 313 GLTLFWIVFKLPLQVEPEVLEGC-EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAAL 371
L ++ LP E LEG E+ + D W +++ + + N D L ++AAL
Sbjct: 234 KTGLLQLI--LP---ELTALEGIEEIEGQRHKDNFWHTLEVVDNISNNTDDLWL-RWAAL 287
Query: 372 F 372
Sbjct: 288 L 288
>gi|408490042|ref|YP_006866411.1| tRNA nucleotidyltransferase/CCA-adding enzyme [Psychroflexus
torquis ATCC 700755]
gi|408467317|gb|AFU67661.1| tRNA nucleotidyltransferase/CCA-adding enzyme [Psychroflexus
torquis ATCC 700755]
Length = 474
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 121/234 (51%), Gaps = 25/234 (10%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEY 134
+ KIF+ L N+E V GG+VRD L + DID+ G E A KV+E
Sbjct: 11 QHKIFNILSEAADDINVEAY--VIGGFVRDFFLKRGKAEDIDVVAVGS-GIELAKKVSEK 67
Query: 135 LSATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRF 192
L P P K TA +K++DL ++FV R E Y+E+SR P +
Sbjct: 68 L--------------PGKPPVKVFKTYGTAMLKIFDLEVEFVGARRESYTEDSRNPKVEQ 113
Query: 193 GTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLR 250
GT +D RRD TIN+L +N L +G+ DLK I TPL P+ TF DDPLR
Sbjct: 114 GTLADDQNRRDFTINALALQLNKKDFGKLLDPFKGLEDLKTQLIKTPLDPEVTFSDDPLR 173
Query: 251 VLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
++RAIRF ++ F +D++ +A + + +S+ER+ TE++ ++ +P
Sbjct: 174 MIRAIRFASQLHFKIDQKSIQAIKDHSERIDI---VSKERIVTELNKILKSEKP 224
>gi|372211154|ref|ZP_09498956.1| tRNA nucleotidyltransferase [Flavobacteriaceae bacterium S85]
Length = 475
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 123/238 (51%), Gaps = 25/238 (10%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSA 137
+F + N++T V GG+VRD +L + D+D+ G E A KVAE L
Sbjct: 15 VFKYITQAALQLNVDTY--VIGGFVRDFILQRGAAKDVDVVAVGS-GIELALKVAELL-- 69
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P+ P K TA ++ DL ++FV R E Y+E+SR P + G+
Sbjct: 70 ------------PNKPKVQVFKTYGTAMLRYQDLEVEFVGARKESYTEDSRNPQVEQGSL 117
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
++D RRD TIN+L ++NTS++ L GI DLK I TPL P T+ DDPLR+LR
Sbjct: 118 QDDQNRRDFTINALAISLNTSNLGTLLDPFGGIDDLKTQIIRTPLDPDITYSDDPLRMLR 177
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
AIRF + +F ++ KA ++ + + I+RERV E++ ++ P H+
Sbjct: 178 AIRFATQLNFTIESNSLKAITTNAERLKI---ITRERVMVEVNKILEAPVPSIGFLHL 232
>gi|365122271|ref|ZP_09339175.1| hypothetical protein HMPREF1033_02521 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642771|gb|EHL82111.1| hypothetical protein HMPREF1033_02521 [Tannerella sp.
6_1_58FAA_CT1]
Length = 476
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 117/228 (51%), Gaps = 20/228 (8%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT 138
IF + T NL V GG+VRD L +D DIDI G E AT AE L +
Sbjct: 16 IFPKISETADEMNLPCY--VIGGYVRDIFLERDSKDIDIVTVGS-GIELATTFAEKLGKS 72
Query: 139 GETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEED 198
+ K+ TA +K D+ ++FV R E Y+ +SR P + GT +D
Sbjct: 73 ARLS------------VFKNFGTAQVKYKDIEVEFVGARRESYTHDSRKPIVEDGTLCDD 120
Query: 199 AYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIR 256
RRD TIN+L +N +L G+ DLK G I TPL P TF DDPLR++RAIR
Sbjct: 121 QNRRDFTINALAICLNKEHFGELIDPFNGMEDLKAGIIRTPLDPDITFSDDPLRMMRAIR 180
Query: 257 FGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
F + +F +++E A + + + IS+ER+ E++ +V+ ++P
Sbjct: 181 FATQLEFSIEKETFAAIERNRKRIEI---ISKERIIDELNKIVTSSKP 225
>gi|365959314|ref|YP_004940881.1| tRNA nucleotidyltransferase [Flavobacterium columnare ATCC 49512]
gi|365735995|gb|AEW85088.1| tRNA nucleotidyltransferase [Flavobacterium columnare ATCC 49512]
Length = 472
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 127/234 (54%), Gaps = 25/234 (10%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEY 134
+ KIF + + NLE V GG+VRD LL ++ DIDI G E A KV+E
Sbjct: 8 DHKIFEIVSQAAQLLNLECY--VIGGFVRDILLERNHKKDIDIVAVGS-GIELALKVSE- 63
Query: 135 LSATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRF 192
+IP NP K+ TA ++ D+ I+FV R E Y+ +SR P +
Sbjct: 64 -------------LIPHNPKVQVFKNYGTAMLRYEDMDIEFVGARKESYNFDSRKPVVEN 110
Query: 193 GTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLR 250
G+ ++D RRD TIN+L +++NTS+ DL G+ DL+ I TPL P T+ DDPLR
Sbjct: 111 GSLKDDQERRDFTINALAFSLNTSNFGDLIDPFNGVIDLEKKIIRTPLDPDITYSDDPLR 170
Query: 251 VLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
++RAIRF ++ +F ++ E A ++ + + IS ER+ E++ ++ +P
Sbjct: 171 MMRAIRFASQLNFQIESESLDAIKRNKDRIHI---ISGERIVDELNKILLSTKP 221
>gi|120436629|ref|YP_862315.1| tRNA nucleotidyltransferase [Gramella forsetii KT0803]
gi|117578779|emb|CAL67248.1| tRNA nucleotidyltransferase [Gramella forsetii KT0803]
Length = 477
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 154/305 (50%), Gaps = 40/305 (13%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLS 136
KIF+ + +++ V GG+VRD +L + + DIDI G E A KV+E L
Sbjct: 14 KIFNVISEAAEDLSVDAY--VIGGFVRDHILERGEPKDIDIVAVGS-GIELAKKVSEKL- 69
Query: 137 ATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGT 194
P+ P K+ TA ++ D+ I+FV R E Y ++SR P + GT
Sbjct: 70 -------------PNKPKVQVFKNFGTAMLRSEDMEIEFVGARKESYRKDSRKPIVEDGT 116
Query: 195 AEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVL 252
E+D RRD TIN+L +N DL G DLK I TPL P T+ DDPLR+
Sbjct: 117 LEDDQNRRDFTINALALKLNKDGFGDLLDPFNGYDDLKKKIIKTPLDPDITYSDDPLRMY 176
Query: 253 RAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
RAIRF ++ +F+++ E KA ++ + + IS+ER+ E++ ++ ++P K
Sbjct: 177 RAIRFASQLNFMIEAESLKAIKANNERIKI---ISKERIVDELNKIMLSDKPSKG----- 228
Query: 313 GLTLFWIVFKLPL--QVEPEV--LEGC-EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQ 367
F +++K L ++ PE+ L G E+ + D W +++ + + N D L +
Sbjct: 229 ----FALLYKTGLLKKIIPELTALAGIDEVEGQTHKDNFWHTLEVVDNISENTDDLWL-R 283
Query: 368 YAALF 372
+AAL
Sbjct: 284 WAALL 288
>gi|345518385|ref|ZP_08797838.1| hypothetical protein BSFG_04018 [Bacteroides sp. 4_3_47FAA]
gi|345457460|gb|EET17869.2| hypothetical protein BSFG_04018 [Bacteroides sp. 4_3_47FAA]
Length = 500
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 131/266 (49%), Gaps = 33/266 (12%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
KIF + T LE V GG+VRD L + DID+ + G E A + L
Sbjct: 37 NKIFKLISETADELGLECY--VVGGYVRDIFLARPSKDIDVVVVGS-GIEMAQTFGKKLG 93
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
S F K+ TA +K +D ++FV R E YS +SR P + GT E
Sbjct: 94 RGAHV--SVF----------KNFGTAQVKYHDTEVEFVGARKESYSHDSRKPVVEDGTLE 141
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN++ +N + +L G+ DLK I TPL P TF DDPLR++R
Sbjct: 142 DDQNRRDFTINAMAVCLNKARFGELVDPFNGLDDLKERTIRTPLDPDITFSDDPLRMMRC 201
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--C 312
+RF + +F +D+ +A + ++ + + IS+ER+ E++ ++ P K + C
Sbjct: 202 VRFATQLNFYIDDTTFEALSRNKERIHI---ISKERIADELNKILLAPIPSKGFIELDRC 258
Query: 313 GLTLFWIVFKLPLQVEPEV--LEGCE 336
GL LPL + PE+ L+G E
Sbjct: 259 GL--------LPL-IFPELVALQGVE 275
>gi|150004215|ref|YP_001298959.1| polyA polymerase [Bacteroides vulgatus ATCC 8482]
gi|149932639|gb|ABR39337.1| putative polyA polymerase [Bacteroides vulgatus ATCC 8482]
Length = 472
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
KIF + T LE V GG+VRD L + DID+ + +GS E
Sbjct: 9 NKIFKLISETADELGLECY--VVGGYVRDIFLKRPSKDIDVVV---VGSGI-----EMAQ 58
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
A G G V K+ TA +K +D ++FV R E YS +SR P + GT E
Sbjct: 59 AFGRKLGRGARV-----SVFKNFGTAQIKYHDTEVEFVGARKESYSHDSRKPVVENGTLE 113
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN++ +N + +L G+ DLK I TPL P TF DDPLR++R
Sbjct: 114 DDQNRRDFTINAMAVCLNKARFGELVDPFNGLDDLKERTIRTPLDPDITFSDDPLRMMRC 173
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--C 312
+RF + +F +D+ +A + ++ + + IS+ER+ E++ ++ P K + C
Sbjct: 174 VRFATQLNFYIDDTTFEALSRNKERIHI---ISKERIADELNKILLAPIPSKGFIELDRC 230
Query: 313 GLTLFWIVFKLPLQVEPEV--LEGCE 336
GL LPL + PE+ L+G E
Sbjct: 231 GL--------LPL-IFPELVALQGVE 247
>gi|265756837|ref|ZP_06090825.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|345514728|ref|ZP_08794235.1| hypothetical protein BSEG_04142 [Bacteroides dorei 5_1_36/D4]
gi|263233623|gb|EEZ19243.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|345455890|gb|EEO48001.2| hypothetical protein BSEG_04142 [Bacteroides dorei 5_1_36/D4]
Length = 500
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 33/266 (12%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
KIF + T +E V GG+VRD L + DID+ + +GS E
Sbjct: 37 NKIFKLISETADELGVECY--VVGGYVRDIFLARPSKDIDVVV---VGSGI-----EMAQ 86
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
A G+ G V K+ TA +K +D ++FV R E YS +SR P + GT E
Sbjct: 87 AFGKKLGRGAHV-----SVFKNFGTAQVKYHDTEVEFVGARKESYSHDSRKPVVEDGTLE 141
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN++ +N + +L G+ DLK I TPL P TF DDPLR++R
Sbjct: 142 DDQNRRDFTINAMAVCLNKARFGELVDPFNGLDDLKERTIRTPLDPDITFSDDPLRMMRC 201
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--C 312
+RF + +F +D+ +A + ++ + + IS+ER+ E++ ++ P K + C
Sbjct: 202 VRFATQLNFYIDDTTFEALSRNKERIHI---ISKERIADELNKILLAPIPSKGFIELDRC 258
Query: 313 GLTLFWIVFKLPLQVEPEV--LEGCE 336
GL LPL + PE+ L+G E
Sbjct: 259 GL--------LPL-IFPELVALQGVE 275
>gi|429752057|ref|ZP_19284944.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429178241|gb|EKY19524.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 469
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 126/245 (51%), Gaps = 31/245 (12%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSA 137
IF + N LE+ V GG+VRD LL K DIDI + G A KVAE L
Sbjct: 11 IFELISNISAEIPLESY--VIGGFVRDYLLKKKLPKDIDI-VSIGSGISLAEKVAEQL-- 65
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P+NP S K+ TA +K L I+FV R E Y NSR P + GT
Sbjct: 66 ------------PNNPKVSIFKNFGTAMIKADGLDIEFVGARRESYESNSRKPYVESGTL 113
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
++D RRD TIN++ +++N + DL G+ DL+ I TPL P T+ DDPLR++R
Sbjct: 114 QDDQNRRDFTINAMAFSLNKDTFGDLIDPFDGLGDLERKLIRTPLDPDITYSDDPLRMMR 173
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICG 313
AIRF + +F ++E KA ++ + + IS ER+ E++ +++ +P G
Sbjct: 174 AIRFATQLNFEIEELSLKAITDNKERLKI---ISNERIVEELNKILASPKPS------VG 224
Query: 314 LTLFW 318
L L +
Sbjct: 225 LKLLY 229
>gi|423315390|ref|ZP_17293319.1| hypothetical protein HMPREF1058_03931 [Bacteroides vulgatus
CL09T03C04]
gi|392679445|gb|EIY72828.1| hypothetical protein HMPREF1058_03931 [Bacteroides vulgatus
CL09T03C04]
Length = 479
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
KIF + T LE V GG+VRD L + DID+ + +GS E
Sbjct: 16 NKIFKLISETADELGLECY--VVGGYVRDIFLKRPSKDIDVVV---VGSGI-----EMAQ 65
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
A G G V K+ TA +K +D ++FV R E YS +SR P + GT E
Sbjct: 66 AFGRKLGRGAHV-----SVFKNFGTAQVKYHDTEVEFVGARKESYSHDSRKPVVEDGTLE 120
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN++ +N + +L G+ DLK I TPL P TF DDPLR++R
Sbjct: 121 DDQNRRDFTINAMAVCLNKARFGELVDPFNGLDDLKERTIRTPLDPDITFSDDPLRMMRC 180
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--C 312
+RF + +F +D+ +A + ++ + + IS+ER+ E++ ++ P K + C
Sbjct: 181 VRFATQLNFYIDDTTFEALSRNKERIHI---ISKERIADELNKILLAPIPSKGFIELDRC 237
Query: 313 GLTLFWIVFKLPLQVEPEV--LEGCE 336
GL LPL + PE+ L+G E
Sbjct: 238 GL--------LPL-IFPELVALQGVE 254
>gi|319644170|ref|ZP_07998695.1| polyA polymerase [Bacteroides sp. 3_1_40A]
gi|317384292|gb|EFV65263.1| polyA polymerase [Bacteroides sp. 3_1_40A]
Length = 474
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 131/266 (49%), Gaps = 33/266 (12%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
KIF + T LE V GG+VRD L + DID+ + G E A + L
Sbjct: 11 NKIFKLISETADELGLECY--VVGGYVRDIFLARPSKDIDVVVVGS-GIEMAQTFGKKLG 67
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
S F K+ TA +K +D ++FV R E YS +SR P + GT E
Sbjct: 68 RGAHV--SVF----------KNFGTAQVKYHDTEVEFVGARKESYSHDSRKPVVEDGTLE 115
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN++ +N + +L G+ DLK I TPL P TF DDPLR++R
Sbjct: 116 DDQNRRDFTINAMAVCLNKARFGELVDPFNGLDDLKERTIRTPLDPDITFSDDPLRMMRC 175
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--C 312
+RF + +F +D+ +A + ++ + + IS+ER+ E++ ++ P K + C
Sbjct: 176 VRFATQLNFYIDDTTFEALSRNKERIHI---ISKERIADELNKILLAPIPSKGFIELDRC 232
Query: 313 GLTLFWIVFKLPLQVEPEV--LEGCE 336
GL LPL + PE+ L+G E
Sbjct: 233 GL--------LPL-IFPELVALQGVE 249
>gi|386821234|ref|ZP_10108450.1| putative domain HDIG-containing protein [Joostella marina DSM
19592]
gi|386426340|gb|EIJ40170.1| putative domain HDIG-containing protein [Joostella marina DSM
19592]
Length = 476
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 158/308 (51%), Gaps = 34/308 (11%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDC-YDIDI-ALDNMMGSEFAT 129
+T + IF + NL++ V GG+VRD LL + DID+ AL + G + A
Sbjct: 7 ITAIQNPIFEIIEKASASLNLKSY--VIGGFVRDFLLERGIPKDIDVVALGS--GIDLAK 62
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
+VA + +T S F K+ TA ++ DL ++FV R E Y +SR P
Sbjct: 63 EVASNIEK--KTKISVF----------KNFGTAMIRFEDLEVEFVGARKESYHFDSRKPV 110
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDD 247
+ GT E+D RRD TIN+L ++N S +L GI+DL++ I TPL P T+ DD
Sbjct: 111 VENGTLEDDQNRRDFTINALAISLNKESYGELLDPFNGISDLENKIIRTPLDPDITYSDD 170
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
PLR++RAIRF ++ DFI++ + +A + + + IS ER+ E++ ++ +P
Sbjct: 171 PLRMMRAIRFASQLDFIIENKSLQAIKKNRERIKI---ISNERIVDELNKILLSKKPS-- 225
Query: 308 MTHICGLTLFWIVFKLPLQVEPEV--LEGC-EMFCTAYLDAAWDLTQLIGSSTFNDDQRR 364
G +L + LP+ + PE+ L+G E + D W +++ + N D
Sbjct: 226 ----IGFSLLFKTGLLPI-IMPELTNLQGIEEKEGQKHKDNFWHTLEVVDNIAKNTDDLW 280
Query: 365 LSQYAALF 372
L ++AAL
Sbjct: 281 L-RWAALL 287
>gi|294774980|ref|ZP_06740510.1| HD domain protein [Bacteroides vulgatus PC510]
gi|294451189|gb|EFG19659.1| HD domain protein [Bacteroides vulgatus PC510]
Length = 472
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 132/266 (49%), Gaps = 33/266 (12%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
KIF + T LE V GG+VRD L + DID+ + +GS E
Sbjct: 9 NKIFKLISETADELGLECY--VVGGYVRDIFLKRPSKDIDVVV---VGSGI-----EMAQ 58
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
A G G V K+ TA +K +D ++FV R E YS +SR P + GT E
Sbjct: 59 AFGRKLGRGAHV-----SVFKNFGTAQVKYHDTEVEFVGARKESYSHDSRKPVVEDGTLE 113
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN++ +N + +L G+ DLK I TPL P TF DDPLR++R
Sbjct: 114 DDQNRRDFTINAMAVCLNKARFGELVDPFNGLDDLKERTIRTPLDPDITFSDDPLRMMRC 173
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--C 312
+RF + +F +D+ +A + ++ + + IS+ER+ E++ ++ P K + C
Sbjct: 174 VRFATQLNFYIDDTTFEALSRNKERIHI---ISKERIADELNKILLAPIPSKGFIELDRC 230
Query: 313 GLTLFWIVFKLPLQVEPEV--LEGCE 336
GL LPL + PE+ L+G E
Sbjct: 231 GL--------LPL-IFPELVALQGVE 247
>gi|408369699|ref|ZP_11167479.1| phosphatase [Galbibacter sp. ck-I2-15]
gi|407744753|gb|EKF56320.1| phosphatase [Galbibacter sp. ck-I2-15]
Length = 477
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 145/283 (51%), Gaps = 34/283 (12%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD +L ++ DIDI G E A +VA+ + G T S F
Sbjct: 30 VIGGFVRDYILQRNVPKDIDIVAQGS-GIELAKEVADLIP--GHTKISVF---------- 76
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K+ TA ++ DL ++FV R E YS NSR P + G+ E+D RRD TIN+L ++N
Sbjct: 77 KNFGTAMIRHKDLEVEFVGARKESYSSNSRKPVVENGSLEDDQNRRDFTINALAISLNQG 136
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
L GI+DLK+ I TPL P T+ DDPLR++RAIRF ++ F ++EE +A
Sbjct: 137 DYGSLLDPFNGISDLKNKLIRTPLDPDITYSDDPLRMMRAIRFASQLKFKIEEESFQAIK 196
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPL--QVEPEV- 331
+ + + IS ER+ E+ ++ +P + F ++F+ L ++ PE+
Sbjct: 197 RNVDRIEI---ISNERIVDELHKIILSEKPSEG---------FKLLFQTGLLSKILPELT 244
Query: 332 -LEGC-EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALF 372
L+G E + D W +++ + N D L ++AAL
Sbjct: 245 NLQGIEEKEGQTHKDNFWHTLEVVDNIAKNTDDLWL-RWAALL 286
>gi|340347516|ref|ZP_08670624.1| polyA polymerase family protein [Prevotella dentalis DSM 3688]
gi|339609212|gb|EGQ14087.1| polyA polymerase family protein [Prevotella dentalis DSM 3688]
Length = 528
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 113/222 (50%), Gaps = 22/222 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQS 156
V GG+VRD L + DID+ + G + A+++ E L A FG
Sbjct: 55 VVGGYVRDLFLERPSSDIDVVVVGS-GIQVASRLKELLGRRAHLAVFRNFG--------- 104
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA +K ++FV R E YS +SR P + GT E+D RRD TIN++ +N
Sbjct: 105 ----TAQVKFRGQEVEFVGARRESYSHDSRKPHVEDGTLEDDQNRRDFTINAMAVCLNRE 160
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L GIADL+ G I TPL P TF DDPLR++R +RF + F +++E +A
Sbjct: 161 RFGELVDPFDGIADLEDGIIRTPLDPDITFSDDPLRMMRCVRFATQLKFYIEDETFEALG 220
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HICGL 314
+ + + IS ERV E++ ++ +QP + H CGL
Sbjct: 221 RNAHRIKI---ISGERVEEELNKIMLADQPSRGFVDLHRCGL 259
>gi|300770908|ref|ZP_07080785.1| polyA polymerase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762181|gb|EFK59000.1| polyA polymerase [Sphingobacterium spiritivorum ATCC 33861]
Length = 472
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 26/261 (9%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSA 137
IFS + + + + E V GG+VRD+++G+ D+DI + G EFA K+ E L+
Sbjct: 9 IFSLIKDLAQQTSTECY--VIGGYVRDRIMGRPFKNDVDIVVIGS-GIEFADKLGEKLN- 64
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAE 196
T T FG M +YD L ++FV R E Y +SR P + GT E
Sbjct: 65 TKVTVYKSFG--------------TAMLVYDGLNVEFVGARKESYRSDSRKPIVENGTLE 110
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN++ Y++N + L GI D+ I TPL P+ TF DDPLR++RA
Sbjct: 111 DDQNRRDFTINAMAYSLNAHNYGALLDPFNGIEDIAQRIIRTPLAPQETFSDDPLRMMRA 170
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGL 314
IRF ++ F +D +A + + ++ IS+ER+ E++ ++ +P ++
Sbjct: 171 IRFASQLGFKIDIHTIEAIYNTRERISI---ISKERITDELNKIILSEKPSVGFKYLFDT 227
Query: 315 TLFWIVFKLPLQVEP-EVLEG 334
L ++F Q+ +V+EG
Sbjct: 228 GLLELIFPAMYQLHGVDVVEG 248
>gi|333029157|ref|ZP_08457218.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Bacteroides coprosuis DSM 18011]
gi|332739754|gb|EGJ70236.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Bacteroides coprosuis DSM 18011]
Length = 481
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 136/276 (49%), Gaps = 35/276 (12%)
Query: 71 ELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMG 124
ELT E K IF + T NLE V GG+VRD L + DID+ + +G
Sbjct: 3 ELTSDELKKKFDSPIFHQISQTADELNLECY--VVGGYVRDIFLDRPSTDIDVVV---VG 57
Query: 125 SEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSEN 184
S K+AE L T G G +N K+ TA +K +L ++FV R E Y +
Sbjct: 58 S--GIKIAEAL-----TRKLGRG---ANLSVFKNFGTAQVKYKNLEVEFVGARKESYQRD 107
Query: 185 SRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKA 242
SR P + GT E+D RRD TIN++ +N +L G+ DL+ I TPL P
Sbjct: 108 SRKPIVEDGTLEDDQNRRDFTINAMAVCLNQERFGELIDPFNGMKDLEEKTIRTPLDPDI 167
Query: 243 TFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN 302
TF DDPLR++R IRF + +F ++++ + A + + + IS+ER+ E++ ++
Sbjct: 168 TFSDDPLRMMRCIRFATQLNFYIEDDTFDSLARNHERIEI---ISKERIADELNKIILSP 224
Query: 303 QPVKAMTHICGLTLFWIVFKLPLQVEPEV--LEGCE 336
P K + L ++F PE+ L+G E
Sbjct: 225 VPSKGFVDLDRSGLLALIF-------PELLALQGVE 253
>gi|433653544|ref|YP_007297398.1| putative domain HDIG-containing protein [Prevotella dentalis DSM
3688]
gi|433304077|gb|AGB29892.1| putative domain HDIG-containing protein [Prevotella dentalis DSM
3688]
Length = 507
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 113/222 (50%), Gaps = 22/222 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQS 156
V GG+VRD L + DID+ + G + A+++ E L A FG
Sbjct: 34 VVGGYVRDLFLERPSSDIDVVVVGS-GIQVASRLKELLGRRAHLAVFRNFG--------- 83
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA +K ++FV R E YS +SR P + GT E+D RRD TIN++ +N
Sbjct: 84 ----TAQVKFRGQEVEFVGARRESYSHDSRKPHVEDGTLEDDQNRRDFTINAMAVCLNRE 139
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L GIADL+ G I TPL P TF DDPLR++R +RF + F +++E +A
Sbjct: 140 RFGELVDPFDGIADLEDGIIRTPLDPDITFSDDPLRMMRCVRFATQLKFYIEDETFEALG 199
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HICGL 314
+ + + IS ERV E++ ++ +QP + H CGL
Sbjct: 200 RNAHRIKI---ISGERVEEELNKIMLADQPSRGFVDLHRCGL 238
>gi|402832176|ref|ZP_10880831.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Capnocytophaga sp. CM59]
gi|402278505|gb|EJU27565.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Capnocytophaga sp. CM59]
Length = 476
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 119/214 (55%), Gaps = 27/214 (12%)
Query: 98 VAGGWVRDKLLGKD-CYDIDIALDNMMGS--EFATKVAEYLSATGETAPSGFGVIPSNPD 154
V GG+VRD LL + DIDI +GS E A KVA L P+NP
Sbjct: 28 VVGGFVRDLLLKRGVAKDIDIV---TLGSGIELAEKVAAQL--------------PNNPK 70
Query: 155 QS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYN 212
S K+ TA +K ++ I+FV R E Y E+SR P + GT +D RRD TIN+L +
Sbjct: 71 ISVFKNFGTAMIKTDNIDIEFVGARKESYREDSRKPIVEDGTLADDQNRRDFTINALAIS 130
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
+N + +L G+ DL++ I TPL P T+ DDPLR+LRAIRF + +F ++E+
Sbjct: 131 LNQDTFGELVDPFGGVDDLQNKIIRTPLEPNITYSDDPLRMLRAIRFATQLNFQIEEKSL 190
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+A A ++ + + IS ER+ E++ +++ +P
Sbjct: 191 QAIADNKERLKI---ISNERIAEELNKILAAARP 221
>gi|390954985|ref|YP_006418743.1| putative domain HDIG-containing protein [Aequorivita sublithincola
DSM 14238]
gi|390420971|gb|AFL81728.1| putative domain HDIG-containing protein [Aequorivita sublithincola
DSM 14238]
Length = 483
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 136/261 (52%), Gaps = 27/261 (10%)
Query: 73 TDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKV 131
T + +F + ++ NLE+ V GG+VRD LL + + DIDI +GS +
Sbjct: 6 TALQNPLFKTISKASQNLNLESY--VIGGYVRDFLLKRGEAKDIDIV---AVGS--GIDL 58
Query: 132 AEYLSATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
AE +S ++P P S K TA +K + ++FV R E YSE SR P
Sbjct: 59 AEEVSK----------LLPGKPKVSVFKTYGTAMLKSGGVELEFVGARKESYSEESRNPA 108
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDD 247
+ GT E+D RRD TIN+L +++ + +L G+ DL+ I TPL P T+ DD
Sbjct: 109 VENGTLEDDQNRRDFTINALALSLSNDNFGELLDPFNGVEDLQKKIIRTPLNPDITYSDD 168
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVK- 306
PLR+LRAIRF + DFI++++ A + + + IS+ERV E++ ++ P K
Sbjct: 169 PLRMLRAIRFATQLDFIIEKDSLDAIIRNAERIKI---ISKERVVDELNKILLSEVPSKG 225
Query: 307 -AMTHICGLTLFWIVFKLPLQ 326
A+ H GL F + + LQ
Sbjct: 226 FALLHKTGLLPFILPELVALQ 246
>gi|345881116|ref|ZP_08832644.1| hypothetical protein HMPREF9431_01308 [Prevotella oulorum F0390]
gi|343920833|gb|EGV31561.1| hypothetical protein HMPREF9431_01308 [Prevotella oulorum F0390]
Length = 483
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 118/223 (52%), Gaps = 24/223 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL-SATGETAP-SGFGVIPSNPDQ 155
V GG+VRD L + DID+ + +GS +VA L A G+ A S F
Sbjct: 34 VVGGYVRDLFLERSSNDIDVVV---VGS--GIQVANALKQALGKKAYLSVF--------- 79
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
K+ TA +K DL ++FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 80 -KNFGTAQVKYRDLEVEFVGARKESYSHDSRKPHVEDGTLEDDQNRRDFTINALAVCLNA 138
Query: 216 SSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
S +L G+ DL+ G I TPL P TF DDPLR+LR +RF A+ +F +D+E A
Sbjct: 139 SHFGELVDPFDGLYDLEDGLIRTPLDPDITFSDDPLRMLRCVRFAAQLNFFIDDETFDAL 198
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
+ + ++ IS ER+ E+ ++ P K + CGL
Sbjct: 199 TRNAERISI---ISGERIVGELHKIMLTATPSKGFIDLYRCGL 238
>gi|409198934|ref|ZP_11227597.1| polynucleotide adenylyltransferase [Marinilabilia salmonicolor JCM
21150]
Length = 471
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 109/211 (51%), Gaps = 23/211 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD +L + DID+ + G + A +VA L + FG
Sbjct: 26 VIGGFVRDLILKRPTTDIDVVVVGS-GIDLANEVARELGGLKVSVFKNFG---------- 74
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
TA K + I+FV R E Y NSR P + GT E+D RRD TIN+L ++N S
Sbjct: 75 ---TAMFKYKGMDIEFVGARRESYQRNSRKPIVEDGTLEDDQNRRDFTINALALSLNEKS 131
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA--A 273
+L G+ DL+ G I TPL P TF DDPLR+LRAIRF + F ++++ + A
Sbjct: 132 FGELVDPFGGLKDLEEGIICTPLDPMVTFSDDPLRILRAIRFATQLGFRIEDKTYEGILA 191
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
D +K IS ERV E++ ++ ++P
Sbjct: 192 QKDRLKI-----ISMERVAEELNKIMMSDRP 217
>gi|427385879|ref|ZP_18882186.1| hypothetical protein HMPREF9447_03219 [Bacteroides oleiciplenus YIT
12058]
gi|425726918|gb|EKU89781.1| hypothetical protein HMPREF9447_03219 [Bacteroides oleiciplenus YIT
12058]
Length = 476
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE GG+VRD L + DID+ +
Sbjct: 2 IELTAEELKQHFSDDIFKQISETADELGLECY--AVGGYVRDIFLQRPSKDIDVVVVGS- 58
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G E A + ++L A K+ TA +K ++FV R E Y
Sbjct: 59 GIEMAEALGKHLGRGAHVAVF------------KNFGTAQVKYRGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N S +L GIADLK I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNRSRFGELVDPFGGIADLKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D++ ++ ++ + ++ IS+ER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNKERISI---ISKERIADELNKILLS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PVPSKGFIELDRSGLLELIF 243
>gi|393785361|ref|ZP_10373513.1| hypothetical protein HMPREF1071_04381 [Bacteroides salyersiae
CL02T12C01]
gi|392662597|gb|EIY56155.1| hypothetical protein HMPREF1071_04381 [Bacteroides salyersiae
CL02T12C01]
Length = 477
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 129/272 (47%), Gaps = 33/272 (12%)
Query: 70 IELTDTE------TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E KIF + T LE V GG+VRD L + DID+ +
Sbjct: 2 IELTQEELKRRFSDKIFGQISETADTLGLECY--VVGGYVRDIFLERPSKDIDVVVVGS- 58
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G E A + ++L S F K+ TA +K + + ++FV R E Y
Sbjct: 59 GIEMAQALGKHLGKGAHV--SVF----------KNFGTAQVKYHGVEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N +L G+ DLK I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKDRFGELVDPFGGMNDLKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + F +D+E ++ + + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLGFYIDDETFESLCRNRERIKI---ISRERIADELNKILLS 223
Query: 302 NQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
P K + L ++F PE++E
Sbjct: 224 PVPSKGFIDLERSGLLALIF-------PELME 248
>gi|288799639|ref|ZP_06405098.1| polyA polymerase family protein [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332887|gb|EFC71366.1| polyA polymerase family protein [Prevotella sp. oral taxon 299 str.
F0039]
Length = 475
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 117/221 (52%), Gaps = 20/221 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ + +GS A VAE L AT G G ++ +
Sbjct: 34 VVGGYVRDLFLERPSKDIDVVV---VGSGIA--VAEKLKAT-----LGRG---AHLSVFR 80
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA +K + ++FV R E Y NSR P + GT E+D RRD TIN+L +N++
Sbjct: 81 NFGTAQVKYKGIEVEFVGARRESYQRNSRKPIVEDGTLEDDQNRRDFTINALAVCLNSAR 140
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L GI DL+ G I TPL P TF DDPLR+LR IRF + +F +++E A
Sbjct: 141 FGELVDPFYGIEDLEDGIIRTPLEPNITFSDDPLRMLRCIRFATQLNFFIEDETFDALIE 200
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
+ + + IS ER+ E++ ++ P K + CGL
Sbjct: 201 NAERIKI---ISGERISDELNKIMLCKTPSKGFIDLYRCGL 238
>gi|325104976|ref|YP_004274630.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Pedobacter saltans DSM 12145]
gi|324973824|gb|ADY52808.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Pedobacter saltans DSM 12145]
Length = 470
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 124/246 (50%), Gaps = 24/246 (9%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDI-ALDNMMGSEFATKVAEYLSA 137
IF+ + +ET V GG+VRD L + D+DI + N G EFA +V + L
Sbjct: 9 IFNIISELSNKLGIETY--VIGGFVRDIFLKRPSKDVDILVIGN--GPEFALEVGKKLH- 63
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
+N K+ TA ++ DL ++FV R E Y NSR P + GT E+
Sbjct: 64 -------------TNVSVFKNFGTAMLRYQDLEVEFVGARKESYRTNSRKPIVENGTLED 110
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
D RRD TIN++ +++ ++ L G+ DLK I+TPL TF DDPLR++RAI
Sbjct: 111 DQKRRDFTINAMAISLSKNNYGQLIDPFNGVKDLKENLIITPLDANETFSDDPLRMMRAI 170
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLT 315
RF + +F + + A ++ + + +S+ER+ E++ ++ +P ++
Sbjct: 171 RFATQLNFQIHQSAIDAIVFNKERIKI---VSKERITDELNKIILSKKPSIGFKYLFDTK 227
Query: 316 LFWIVF 321
L I+F
Sbjct: 228 LLHIIF 233
>gi|325285000|ref|YP_004260790.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Cellulophaga lytica DSM 7489]
gi|324320454|gb|ADY27919.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Cellulophaga lytica DSM 7489]
Length = 471
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 146/283 (51%), Gaps = 34/283 (12%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LL + DID+ G E A KVA L P+NP S
Sbjct: 31 VIGGFVRDFLLKRGTPKDIDVVAVGS-GIELAQKVASKL--------------PTNPKVS 75
Query: 157 --KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
K+ TA +K DL ++FV R E Y E+SR P + G+ E+D RRD TIN++ ++N
Sbjct: 76 VFKNFGTAMLKYNDLELEFVGARKESYHEDSRKPIVENGSLEDDQNRRDFTINAMAISLN 135
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
++ L GI DL + I TPL P T+ DDPLR++RAIRF + F ++E+ +
Sbjct: 136 KNTYGQLLDPFNGINDLANKIIKTPLEPGVTYSDDPLRMMRAIRFATQLQFNIEEKSFLS 195
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVK--AMTHICGLTLFWIVFKLPLQVEPE 330
++ + + IS+ER+ E++ +++ ++P A+ H L + F LP E
Sbjct: 196 ITENKDRINI---ISKERIVDELNKIMNSSKPSIGFALLHKSKL----LPFILP---ELS 245
Query: 331 VLEGC-EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALF 372
L+G E+ + D W +++ + + N D L ++AAL
Sbjct: 246 ALQGIEEIEGHKHKDNFWHTLEVVDNISENTDNLWL-RWAALL 287
>gi|88802647|ref|ZP_01118174.1| putative polyA polymerase [Polaribacter irgensii 23-P]
gi|88781505|gb|EAR12683.1| putative polyA polymerase [Polaribacter irgensii 23-P]
Length = 473
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 25/233 (10%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKD-CYDIDIALDNMMGSEFATKVAEYL 135
+ IF + +H ++E+ V GG+VRD L + DIDI +GS A +AE +
Sbjct: 12 SDIFKIISEASKHLHIESY--VIGGFVRDFFLKRGTAKDIDIV---AIGSGIA--LAEKV 64
Query: 136 SATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG 193
++ ++P+ P K TA ++ D+ I+FV R E YSE SR P + G
Sbjct: 65 AS----------LLPNKPKVQIFKTYGTAMLRYKDIEIEFVGARKESYSEESRNPEVFEG 114
Query: 194 TAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRV 251
T +ED RRD TIN+L ++N + L G+ DLK+ I TPL P T+ DDPLR+
Sbjct: 115 TLQEDQNRRDFTINALALSLNEENFGALLDPFHGMEDLKNACIRTPLNPAITYSDDPLRM 174
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
LRAIRF + +F ++E A + + + I+RER+ EI+ +++ +P
Sbjct: 175 LRAIRFATQLNFTIEEASLVAIEKNSERLEI---ITRERIVDEINKIMASTKP 224
>gi|357059951|ref|ZP_09120725.1| hypothetical protein HMPREF9332_00282 [Alloprevotella rava F0323]
gi|355376841|gb|EHG24081.1| hypothetical protein HMPREF9332_00282 [Alloprevotella rava F0323]
Length = 478
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 121/242 (50%), Gaps = 26/242 (10%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT 138
IF L T +ET L GG+VRD LL + DID+ + G EFA + L
Sbjct: 18 IFEKLSQTADKLQIETYL--VGGYVRDLLLNRPTNDIDVVVIGS-GIEFAKSFTDTLGKG 74
Query: 139 GETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
+ FG TA +K + I+FV R E YS +SR P + GT E+
Sbjct: 75 AHLSIFRNFG-------------TAQVKWHHYEIEFVGARKESYSHDSRKPIVEDGTLED 121
Query: 198 DAYRRDLTINSLFYNI---NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
D RRD TIN+L ++ N + D G GI DL+ G I TPL P TF DDPLR+LR
Sbjct: 122 DQNRRDFTINALAVSLTPLNFGKLIDPFG-GIQDLQDGIIRTPLDPNITFSDDPLRMLRC 180
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HIC 312
IRF A+ +F + +E +A ++ + + IS ER+ E++ ++ +P H C
Sbjct: 181 IRFSAQLNFRIYDETFEALTQNKERIKI---ISAERIIDELNKIMLSPRPSIGFVELHRC 237
Query: 313 GL 314
GL
Sbjct: 238 GL 239
>gi|270295998|ref|ZP_06202198.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317479566|ref|ZP_07938693.1| poly A polymerase head domain-containing protein [Bacteroides sp.
4_1_36]
gi|270273402|gb|EFA19264.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316904228|gb|EFV26055.1| poly A polymerase head domain-containing protein [Bacteroides sp.
4_1_36]
Length = 476
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 126/255 (49%), Gaps = 28/255 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
I+LT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IDLTAEELKQYFSDDIFKRISETADELGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K Y ++FV R E Y+
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQLKYYGTEVEFVGARKESYTH 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N +L GI DLK I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNRVRYGELVDPFGGIGDLKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R +RF + F +D+E + + + ++ IS+ER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCVRFATQLGFYIDDETFDSLERNRERISI---ISKERIADELNKIILS 223
Query: 302 NQPVKAMTHI--CGL 314
P K + CGL
Sbjct: 224 PIPSKGFIELDRCGL 238
>gi|423303723|ref|ZP_17281722.1| hypothetical protein HMPREF1072_00662 [Bacteroides uniformis
CL03T00C23]
gi|423307557|ref|ZP_17285547.1| hypothetical protein HMPREF1073_00297 [Bacteroides uniformis
CL03T12C37]
gi|392687273|gb|EIY80568.1| hypothetical protein HMPREF1072_00662 [Bacteroides uniformis
CL03T00C23]
gi|392689983|gb|EIY83256.1| hypothetical protein HMPREF1073_00297 [Bacteroides uniformis
CL03T12C37]
Length = 486
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 126/255 (49%), Gaps = 28/255 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
I+LT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 12 IDLTAEELKQYFSDDIFKRISETADELGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 66
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K Y ++FV R E Y+
Sbjct: 67 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQLKYYGTEVEFVGARKESYTH 116
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N +L GI DLK I TPL P
Sbjct: 117 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNRVRYGELVDPFGGIGDLKEKTIRTPLDPD 176
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R +RF + F +D+E + + + ++ IS+ER+ E++ ++
Sbjct: 177 ITFSDDPLRMMRCVRFATQLGFYIDDETFDSLERNRERISI---ISKERIADELNKIILS 233
Query: 302 NQPVKAMTHI--CGL 314
P K + CGL
Sbjct: 234 PIPSKGFIELDRCGL 248
>gi|260062206|ref|YP_003195286.1| polyA polymerase [Robiginitalea biformata HTCC2501]
gi|88783768|gb|EAR14939.1| putative polyA polymerase [Robiginitalea biformata HTCC2501]
Length = 486
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 156/304 (51%), Gaps = 40/304 (13%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSA 137
IF L +T R +LET V GG+VRD LG++ DIDI +GS A +AE L+A
Sbjct: 14 IFKKLSDTARELSLETY--VIGGFVRDYFLGREQKKDIDIV---AVGSGIA--LAEKLAA 66
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
+P P S ++ TA ++ +L ++FV R E Y+ +SR P + G+
Sbjct: 67 G----------LPGKPRVSVFRNFGTAMVRHGELELEFVGARKESYNRDSRKPAVEDGSL 116
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
E+D RRD TIN+L ++N L G+ DL+ G I TPL P T+ DDPLR++R
Sbjct: 117 EDDQKRRDFTINALALSLNPEDFGRLLDPFGGMDDLEAGLIRTPLAPAETYSDDPLRMIR 176
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICG 313
AIRF A+ F ++ + A AS + + +S ER+ E++ ++ +P G
Sbjct: 177 AIRFAAQLGFRIERDSLNAIASQHERLRI---VSMERIVEELNKILLTEKPS------VG 227
Query: 314 LTLFWIVFKLPL--QVEPEV--LEGC-EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQY 368
L L +FK L + PE+ L+G E + D W +++ + + N D L ++
Sbjct: 228 LGL---LFKTGLLRHILPELVALQGIEEKEGQRHKDNFWHTLEVVDNISKNTDNLWL-RW 283
Query: 369 AALF 372
AAL
Sbjct: 284 AALL 287
>gi|392399254|ref|YP_006435855.1| domain HDIG-containing protein [Flexibacter litoralis DSM 6794]
gi|390530332|gb|AFM06062.1| putative domain HDIG-containing protein [Flexibacter litoralis DSM
6794]
Length = 493
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 140/264 (53%), Gaps = 28/264 (10%)
Query: 65 QVRDKIELTD--TETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLG--KDCYDIDIALD 120
+ + ELT+ ET IF + N+ NL+T V GG+VRD LL K+ DIDI
Sbjct: 5 ETKQPTELTELLNETSIFEWIKNSADALNLQTF--VIGGFVRDFLLKRKKEIKDIDIVC- 61
Query: 121 NMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYD------LWIDFV 174
+GS +A++++ + A + F N K TA + L D + ++FV
Sbjct: 62 --IGS--GITLAKHVAKSYGKANNIF----VNVSIFKRFGTAMITLEDQQTKQKIEVEFV 113
Query: 175 NLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHG 232
R E Y +SR PT+ GT E+D RRD TIN+L ++N + + G+ DL+
Sbjct: 114 GARKESYDFDSRKPTVEEGTLEDDQKRRDFTINALAVSLNEETYGNFLDPFDGLKDLRKK 173
Query: 233 KIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVG 292
I TPL P+ TF DDPLR+LRA+RF ++ F ++ +A ++ + + + IS+ER+
Sbjct: 174 IIRTPLAPEKTFSDDPLRMLRAVRFASQLGFDIEVNTFEALSTQKERIKI---ISQERIT 230
Query: 293 TEIDLMVSGNQPVKA--MTHICGL 314
TE++ ++ N P + + CGL
Sbjct: 231 TELNKIILSNPPSYGFKLLYQCGL 254
>gi|375014123|ref|YP_004991111.1| putative domain HDIG-containing protein [Owenweeksia hongkongensis
DSM 17368]
gi|359350047|gb|AEV34466.1| putative domain HDIG-containing protein [Owenweeksia hongkongensis
DSM 17368]
Length = 469
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 37/302 (12%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLG-KDCYDIDIALDNMMGSEFATKVAEYLSA 137
IF + ++T V GG+VRDK+LG K+ DID + G A VA+ L
Sbjct: 9 IFKVIAEAADELQMDTY--VVGGYVRDKILGRKNSKDIDF-VSVGSGITLAKLVAKKLGR 65
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
+ FG TA +K DL ++FV R E Y+ +SR P + GT ++
Sbjct: 66 SKIAVFKNFG-------------TAQVKYKDLELEFVGARKESYNRDSRKPIVEDGTLDD 112
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
D RRD TIN++ ++N + +L G++DL++ I TPL P T+ DDPLR++RAI
Sbjct: 113 DQKRRDFTINAMAVSLNAKNYGELLDPFGGVSDLENKIIRTPLDPHITYSDDPLRMMRAI 172
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLT 315
RF ++ +F ++E+ +A + + + IS+ERV E++ ++ +P GL
Sbjct: 173 RFASQLNFKIEEKSFQAILETKERIDI---ISKERVSDELNKIMLSPKPS------VGLR 223
Query: 316 LFW----IVFKLPLQVEPEVLEGCEMF-CTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAA 370
LF+ + + LP E L+G E + D + Q++ + + D L +YAA
Sbjct: 224 LFYESGLMEYFLP---EIIALKGVEEVDGQLHKDNFYHTLQVVDNISETTDNLWL-RYAA 279
Query: 371 LF 372
LF
Sbjct: 280 LF 281
>gi|383123384|ref|ZP_09944065.1| hypothetical protein BSIG_2970 [Bacteroides sp. 1_1_6]
gi|382984071|gb|EES67579.2| hypothetical protein BSIG_2970 [Bacteroides sp. 1_1_6]
Length = 500
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 132/266 (49%), Gaps = 26/266 (9%)
Query: 64 VQVRDKIELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDI 117
+ ++ IELT E K IF + T LE V GG+VRD L + DID+
Sbjct: 19 LSIKKMIELTQEELKQYFSEPIFGHIAETADALGLECY--VVGGYVRDIFLQRPSKDIDV 76
Query: 118 ALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLR 177
+ +GS A +AE A G+ G V K+ TA +K ++FV R
Sbjct: 77 VV---VGSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQVKYKGTEVEFVGAR 123
Query: 178 CEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIV 235
E Y +SR P + GT E+D RRD TIN++ +N + +L G+AD+K I
Sbjct: 124 KESYQRDSRKPIVEDGTLEDDQNRRDFTINAMAVCLNKARFGELVDPFGGMADMKEKTIR 183
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
TPL P TF DDPLR++R IRF + +F +D++ ++ ++ + + ISRER+ E+
Sbjct: 184 TPLDPDITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNKDRIEI---ISRERIADEL 240
Query: 296 DLMVSGNQPVKAMTHICGLTLFWIVF 321
+ ++ P K + L ++F
Sbjct: 241 NKIILSPIPSKGFVELERSGLLPLIF 266
>gi|383450266|ref|YP_005356987.1| tRNA nucleotidyltransferase [Flavobacterium indicum GPTSA100-9]
gi|380501888|emb|CCG52930.1| tRNA nucleotidyltransferase [Flavobacterium indicum GPTSA100-9]
Length = 471
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 126/241 (52%), Gaps = 25/241 (10%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEY 134
E KIF+ + + NLE V GG+VRD LL +D DIDI G E A KV++
Sbjct: 8 EHKIFTIISQAAQELNLECY--VIGGFVRDILLQRDHKKDIDIVAVGS-GIELALKVSQ- 63
Query: 135 LSATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRF 192
+IP P K+ TA ++ D+ I+FV R E Y+ SR P +
Sbjct: 64 -------------LIPHQPKVQVFKNYGTAMLRYDDMDIEFVGARKESYNFESRKPVVEN 110
Query: 193 GTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLR 250
GT ++D RRD TIN++ +++N +L G+ DL++ I TPL T+ DDPLR
Sbjct: 111 GTLKDDQERRDFTINAMAFSLNQEKFGELVDPFNGVEDLQNKIIKTPLDADITYSDDPLR 170
Query: 251 VLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTH 310
++RAIRF + +F ++ + A ++ + + IS ER+ E++ +++ +QP H
Sbjct: 171 MMRAIRFATQLNFKIETDSLAAITRNKDRIKI---ISGERIVDELNKILASSQPSIGFLH 227
Query: 311 I 311
+
Sbjct: 228 L 228
>gi|373953314|ref|ZP_09613274.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Mucilaginibacter paludis DSM 18603]
gi|373889914|gb|EHQ25811.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Mucilaginibacter paludis DSM 18603]
Length = 472
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 117/232 (50%), Gaps = 20/232 (8%)
Query: 92 LETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPS 151
+E V GG+VRD L + DIDI + +G+ A AE ++A S F
Sbjct: 20 MEVDAYVIGGFVRDLYLNRPSKDIDIVV---VGNGIA--FAEQVAAKLRVPLSVF----- 69
Query: 152 NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFY 211
K+ TA +K D+ I+FV R E Y SR P + GT E+D RRD TIN+L
Sbjct: 70 -----KNFGTAMLKYQDMEIEFVGARKESYRSESRKPIVENGTLEDDQKRRDFTINALAI 124
Query: 212 NINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEEL 269
++ L GI DL++ I TPL P TF DDPLR++RA+RF ++ +F +DE
Sbjct: 125 ALHPKQFGQLIDPFGGITDLQNKLIRTPLDPVETFSDDPLRIMRAVRFASQLNFQIDES- 183
Query: 270 KKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
A A+ A+ + +S+ER+ E++ ++ P H+ L +F
Sbjct: 184 --ALAAISTTASRISIVSQERITDELNKIILSPIPSIGFKHLFNTGLLKAIF 233
>gi|345868280|ref|ZP_08820273.1| poly A polymerase head domain protein [Bizionia argentinensis
JUB59]
gi|344047335|gb|EGV42966.1| poly A polymerase head domain protein [Bizionia argentinensis
JUB59]
Length = 475
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 114/212 (53%), Gaps = 23/212 (10%)
Query: 98 VAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LL + + DIDI G E A +VA+ L P+ P
Sbjct: 28 VIGGFVRDFLLKRGNPKDIDIVAVGS-GIELARQVAQNL--------------PNKPKVQ 72
Query: 157 --KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
K TA ++ D+ I+FV R E Y+ENSR P + GT E+D RRD TIN+L ++N
Sbjct: 73 VFKTYGTAMLRFEDIEIEFVGARKESYNENSRNPIVENGTLEDDQNRRDFTINALALSLN 132
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
SS DL +G DL+H I TPL P T+ DDPLR++RA+RF + F +D + +
Sbjct: 133 KSSYGDLLDPFQGELDLEHKIIRTPLDPDITYSDDPLRMMRAVRFATQLGFTIDSKSLDS 192
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ + + + I++ER+ E+ ++ +P
Sbjct: 193 ISKNNHRIEI---ITKERIVVELHKILESPKP 221
>gi|29347385|ref|NP_810888.1| tRNA nucleotidyltransferase [Bacteroides thetaiotaomicron VPI-5482]
gi|29339285|gb|AAO77082.1| tRNA nucleotidyltransferase [Bacteroides thetaiotaomicron VPI-5482]
Length = 502
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 132/266 (49%), Gaps = 26/266 (9%)
Query: 64 VQVRDKIELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDI 117
+ ++ IELT E K IF + T LE V GG+VRD L + DID+
Sbjct: 21 LSIKKMIELTQEELKQYFSEPIFGHIAETADALGLECY--VVGGYVRDIFLQRPSKDIDV 78
Query: 118 ALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLR 177
+ +GS A +AE A G+ G V K+ TA +K ++FV R
Sbjct: 79 VV---VGSGIA--MAE---ALGKRLGRGAYV-----SVFKNFGTAQVKYKGTEVEFVGAR 125
Query: 178 CEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIV 235
E Y +SR P + GT E+D RRD TIN++ +N + +L G+AD+K I
Sbjct: 126 KESYQRDSRKPIVEDGTLEDDQNRRDFTINAMAVCLNKARFGELVDPFGGMADMKEKTIR 185
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
TPL P TF DDPLR++R IRF + +F +D++ ++ ++ + + ISRER+ E+
Sbjct: 186 TPLDPDITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNKDRIEI---ISRERIADEL 242
Query: 296 DLMVSGNQPVKAMTHICGLTLFWIVF 321
+ ++ P K + L ++F
Sbjct: 243 NKIILSPIPSKGFVELERSGLLPLIF 268
>gi|420149098|ref|ZP_14656279.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394754160|gb|EJF37601.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 469
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 144/285 (50%), Gaps = 38/285 (13%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LL K DID+ + G A KVAE L PS P S
Sbjct: 28 VIGGFVRDYLLEKKLPKDIDV-VSIGSGISLAEKVAERL--------------PSAPKVS 72
Query: 157 --KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
K+ TA +K L I+FV R E Y NSR P + GT ++D RRD TIN++ +++N
Sbjct: 73 IFKNFGTAMIKADGLDIEFVGARRESYEANSRKPYVESGTLQDDQNRRDFTINAMAFSLN 132
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ +L G+ DLK I TPL P T+ DDPLR++RAIRF + +F ++++ KA
Sbjct: 133 RDTFGELIDPFDGLGDLKRKLIRTPLDPDITYSDDPLRMMRAIRFATQLNFKIEKQSLKA 192
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFW----IVFKLPLQVE 328
++ + + IS ER+ E++ +++ +P GL L + + + LP +
Sbjct: 193 ITDNKERLKI---ISNERIVEELNKILASPKPS------IGLKLLYETGLLHYILPELI- 242
Query: 329 PEVLEGCEMF-CTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALF 372
L+G E + D W +++ + + N D L ++AAL
Sbjct: 243 --ALQGVEEHDGQRHKDNFWHTLEVVDNISENTDNLWL-RWAALL 284
>gi|256820884|ref|YP_003142163.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Capnocytophaga ochracea DSM 7271]
gi|256582467|gb|ACU93602.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Capnocytophaga ochracea DSM 7271]
Length = 469
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 152/304 (50%), Gaps = 40/304 (13%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSA 137
IF + + +LE+ V GG+VRD LL K DID+ + G A KVAE L
Sbjct: 11 IFKLISDISAEISLESY--VIGGFVRDYLLEKKLPKDIDV-VSIGSGISLAEKVAERL-- 65
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P+ P S K+ TA +K L I+FV R E Y NSR P + GT
Sbjct: 66 ------------PNAPKVSIFKNFGTAMIKADGLDIEFVGARRESYEANSRKPYVESGTL 113
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
++D RRD TIN++ +++N + +L G+ DLK I TPL P T+ DDPLR++R
Sbjct: 114 QDDQNRRDFTINAMAFSLNRDTFGELIDPFDGLGDLKRKLIRTPLDPDITYSDDPLRMMR 173
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICG 313
AIRF + +F ++++ KA ++ + + IS ER+ E++ +++ +P G
Sbjct: 174 AIRFATQLNFKIEKQSLKAITDNKERLKI---ISSERIVEELNKILASPKPS------IG 224
Query: 314 LTLFW----IVFKLPLQVEPEVLEGCEMF-CTAYLDAAWDLTQLIGSSTFNDDQRRLSQY 368
L L + + + LP + L+G E + D W +++ + + N D L ++
Sbjct: 225 LKLLYETGLLHYILPELI---ALQGVEEHDGQRHKDNFWHTLEVVDNISENTDNLWL-RW 280
Query: 369 AALF 372
AAL
Sbjct: 281 AALL 284
>gi|313202600|ref|YP_004041257.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Paludibacter propionicigenes WB4]
gi|312441916|gb|ADQ78272.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Paludibacter propionicigenes WB4]
Length = 478
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 117/238 (49%), Gaps = 27/238 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGE-TAPSGFGVIPSNPDQS 156
V GG+VRD L + DID+ + G A KVA L + T FG
Sbjct: 35 VIGGFVRDIFLKRPSKDIDVVVVGS-GIALAEKVALKLGKKAKLTVFKNFG--------- 84
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA +KL DL ++FV R E Y +SR P + GT E+D RRD TIN+L +N
Sbjct: 85 ----TAQVKLNDLEVEFVGARKESYQRDSRKPIVEDGTLEDDQNRRDFTINALAICLNKD 140
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L GI DLK+ I TPL P TF DDPLR++R IRF A+ F ++ A
Sbjct: 141 RYGELVDPFGGIEDLKNFVIRTPLNPDITFSDDPLRMMRGIRFSAQLGFFIETNTFDAIV 200
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVL 332
++ + + IS+ER+ E++ +++ +P + L ++F PEVL
Sbjct: 201 RNKERIEI---ISKERIADELNKIMASRKPSVGFILLEKTGLLELIF-------PEVL 248
>gi|298385155|ref|ZP_06994714.1| polyA polymerase family protein [Bacteroides sp. 1_1_14]
gi|298262299|gb|EFI05164.1| polyA polymerase family protein [Bacteroides sp. 1_1_14]
Length = 477
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 129/260 (49%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQYFSEPIFGHIAETADALGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQVKYNGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN++ +N + +L G+AD+K I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINAMAVCLNKARFGELVDPFGGMADMKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D++ ++ ++ + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNKDRIEI---ISRERIADELNKIILS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PIPSKGFVELERSGLLPLIF 243
>gi|160889203|ref|ZP_02070206.1| hypothetical protein BACUNI_01624 [Bacteroides uniformis ATCC 8492]
gi|156861210|gb|EDO54641.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Bacteroides uniformis ATCC 8492]
Length = 476
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 125/255 (49%), Gaps = 28/255 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
I+LT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IDLTAEELKQYFSDDIFKRISETADELGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K Y ++FV R E Y+
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQLKYYGTEVEFVGARKESYTH 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N +L GI DLK I PL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNRVRYGELVDPFGGIGDLKEKTIRAPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R +RF + F +D+E + + + ++ IS+ER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCVRFATQLGFYIDDETFDSLERNRERISI---ISKERIADELNKIILS 223
Query: 302 NQPVKAMTHI--CGL 314
P K + CGL
Sbjct: 224 PIPSKGFIELDRCGL 238
>gi|319951891|ref|YP_004163158.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Cellulophaga algicola DSM 14237]
gi|319420551|gb|ADV47660.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Cellulophaga algicola DSM 14237]
Length = 473
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 143/298 (47%), Gaps = 28/298 (9%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKD-CYDIDIALDNMMGSEFATKVAEYLSA 137
IF + + NL+ V GG+VRD LL + DIDI G E A KVA L
Sbjct: 14 IFKIISTAAKELNLDCY--VIGGFVRDYLLARGTAKDIDIVAIGS-GIELAKKVASKLKG 70
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
E S F K+ TA +K D+ ++FV R E Y E+SR P + G+ E+
Sbjct: 71 KPEV--SVF----------KNFGTAMIKYEDIELEFVGARKESYHEDSRKPVVEDGSLED 118
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
D RRD TIN+L ++N + L GI DL+ I TPL P T+ DDPLR++RAI
Sbjct: 119 DQKRRDFTINALAISLNEPTYGTLLDPFNGIQDLEDKIIKTPLAPGITYSDDPLRMMRAI 178
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLT 315
RF + DF +++ A + + + IS+ER+ E+ +++ P + +
Sbjct: 179 RFATQLDFKIEDISLNAITEHKDRIKI---ISKERIVDELHKILASKIPSLGFSLLHKTE 235
Query: 316 LFWIVFKLPLQVEPEVLEGC-EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALF 372
L + LP E L+G E+ + D W +++ + N D L ++AAL
Sbjct: 236 LLGYI--LP---ELTALQGIEEIEGQRHKDNFWHTLEVVDNIALNTDNVWL-RWAALL 287
>gi|167764732|ref|ZP_02436853.1| hypothetical protein BACSTE_03122 [Bacteroides stercoris ATCC
43183]
gi|167697401|gb|EDS13980.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Bacteroides stercoris ATCC 43183]
Length = 474
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 132/260 (50%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IELTTEELKQRFSDSIFKRISETADELGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE L+ G G S K+ TA +K + ++FV R E Y+
Sbjct: 57 GSGIA--MAEALARR-----LGRGAHLS---VFKNFGTAQLKYHGTEVEFVGARKESYTH 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + G+ E+D RRD TIN+L +N+ +L G+AD+K I TPL P
Sbjct: 107 DSRKPIVEDGSLEDDQNRRDFTINALAVCLNSQRYGELVDPFGGMADMKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D++ ++ ++ + ++ IS+ER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNKERISI---ISKERIADELNKILLS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PVPSKGFIDLDRSGLLQLIF 243
>gi|429756389|ref|ZP_19288984.1| HDIG domain protein [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429171416|gb|EKY13042.1| HDIG domain protein [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 469
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 152/302 (50%), Gaps = 36/302 (11%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSA 137
IF + + +LE+ V GG+VRD LL K DID+ + G A KVAE L
Sbjct: 11 IFKLISDISAEISLESY--VIGGFVRDYLLEKKLPKDIDV-VSIGSGISLAEKVAERL-- 65
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P+ P S K+ TA +K L I+FV R E Y NSR P + GT
Sbjct: 66 ------------PNAPKVSIFKNFGTAMIKADGLDIEFVGARRESYEANSRKPYVESGTL 113
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
++D RRD TIN++ +++N + +L G+ DLK I TPL P T+ DDPLR++R
Sbjct: 114 QDDQNRRDFTINAMAFSLNRDTFGELIDPFDGLGDLKRKLIRTPLDPDITYSDDPLRMMR 173
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICG 313
AIRF + +F ++++ KA ++ + + IS ER+ E++ +++ +P G
Sbjct: 174 AIRFATQLNFKIEKQSLKAITDNKERLKI---ISSERIVEELNKILASPKPS------IG 224
Query: 314 LTLFWIVFKLPLQVEPEV--LEGCEMF-CTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAA 370
L L + L + PE+ L+G E + D W +++ + + N D L ++AA
Sbjct: 225 LKLLYETGLLHY-ILPELIALQGVEEHDGQRHKDNFWHTLEVVYNISENTDNLWL-RWAA 282
Query: 371 LF 372
L
Sbjct: 283 LL 284
>gi|379731383|ref|YP_005323579.1| tRNA nucleotidyltransferase [Saprospira grandis str. Lewin]
gi|378576994|gb|AFC25995.1| tRNA nucleotidyltransferase [Saprospira grandis str. Lewin]
Length = 476
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 128/257 (49%), Gaps = 22/257 (8%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNM-MGSEF 127
+ E+T E +F + + T V GG+VRD+LLG+ D+ L + G E
Sbjct: 2 QFEMTAQEEALFKTIAQAAQKLGFPTY--VIGGYVRDRLLGRSSKGKDLDLVCVGSGIEL 59
Query: 128 ATKVAEYLSATGETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSR 186
A +A+ L + + FG TA + D I+ V R E Y SR
Sbjct: 60 AKAIAKCLKPQPKVVTYARFG-------------TAALHHKDWEIELVGARKESYRPESR 106
Query: 187 IPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATF 244
P + GT E+D RRD TIN+L ++N + L G+ADL+ I TPL P+ TF
Sbjct: 107 KPIVEDGTLEDDQNRRDFTINALAISLNEADFGQLLDPFGGLADLEAKCIRTPLAPETTF 166
Query: 245 LDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
DDPLR++RAIRF ++ F ++E+ A S+ + + IS+ER+ +E++ ++ +P
Sbjct: 167 SDDPLRMMRAIRFASQLGFEIEEKTFAAIQSERERIHI---ISQERISSELNKIMLSTKP 223
Query: 305 VKAMTHICGLTLFWIVF 321
++ + L ++F
Sbjct: 224 SLGLSLLFKSGLLELIF 240
>gi|295084899|emb|CBK66422.1| tRNA nucleotidyltransferase/poly(A) polymerase [Bacteroides
xylanisolvens XB1A]
Length = 477
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 128/260 (49%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T F +E V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGQIAETADAFGMECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQVKYRGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N + +L G+ D+K I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKARFGELVDPFGGMEDMKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + F +D++ ++ ++ + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLGFYIDDDTFESLCRNKERIEI---ISRERIADELNKIILS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PIPSKGFIDLERSGLLPLIF 243
>gi|315224075|ref|ZP_07865915.1| polyA polymerase family protein [Capnocytophaga ochracea F0287]
gi|420159851|ref|ZP_14666647.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Capnocytophaga ochracea str. Holt 25]
gi|314945808|gb|EFS97817.1| polyA polymerase family protein [Capnocytophaga ochracea F0287]
gi|394761530|gb|EJF43884.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Capnocytophaga ochracea str. Holt 25]
Length = 469
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 144/285 (50%), Gaps = 38/285 (13%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LL K DID+ + G A KVAE L P+ P S
Sbjct: 28 VIGGFVRDYLLEKKLPKDIDV-VSIGSGISLAEKVAERL--------------PNAPKVS 72
Query: 157 --KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
K+ TA +K L I+FV R E Y NSR P + GT ++D RRD TIN++ +++N
Sbjct: 73 IFKNFGTAMIKADGLDIEFVGARRESYEANSRKPYVESGTLQDDQNRRDFTINAMAFSLN 132
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ +L G+ DLK I TPL P T+ DDPLR++RAIRF + +F ++++ KA
Sbjct: 133 RDTFGELIDPFDGLGDLKRKLIRTPLDPDITYSDDPLRMMRAIRFATQLNFKIEKQSLKA 192
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFW----IVFKLPLQVE 328
++ + + IS ER+ E++ +++ +P GL L + + + LP +
Sbjct: 193 ITDNKERLKI---ISNERIVEELNKILASPKPS------IGLKLLYETGLLHYILPELI- 242
Query: 329 PEVLEGCEMF-CTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALF 372
L+G E + D W +++ + + N D L ++AAL
Sbjct: 243 --ALQGVEEHDGQRHKDNFWHTLEVVDNISENTDNLWL-RWAALL 284
>gi|329957804|ref|ZP_08298279.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Bacteroides clarus YIT 12056]
gi|328522681|gb|EGF49790.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Bacteroides clarus YIT 12056]
Length = 479
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 131/260 (50%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 7 IELTTEELKQRFSDNIFKRISETADELGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 61
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE L+ G G S K+ TA +K + ++FV R E Y+
Sbjct: 62 GSGIA--MAEALAKR-----LGRGAHLS---VFKNFGTAQLKYHGTEVEFVGARKESYTH 111
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + G+ E+D RRD TIN+L +N +L G+AD++ I TPL P
Sbjct: 112 DSRKPIVEDGSLEDDQNRRDFTINALAVCLNRERYGELADPFGGMADMREKTIRTPLDPD 171
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D++ ++ ++ + ++ ISRER+ E++ ++
Sbjct: 172 ITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNKERISI---ISRERIADELNKILLS 228
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 229 PVPSKGFIDLDRSGLLQLIF 248
>gi|376316211|emb|CCF99608.1| CCA-adding enzyme (tRNA nucleotidyltransferase) [uncultured
Flavobacteriia bacterium]
Length = 472
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 119/245 (48%), Gaps = 32/245 (13%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LL + C DIDI + G E A A + FG
Sbjct: 28 VIGGFVRDLLLDRSCKDIDIVTEGS-GIELARATASRMGIKQVHVFKNFG---------- 76
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
TA K D I+FV R E Y+ SR P + GT E+D RRD TIN++ ++N S
Sbjct: 77 ---TAMFKARDFEIEFVGARKESYTRGSRKPVVEDGTLEDDQNRRDFTINAMAISLNVDS 133
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
L G+ DL I TPL P T+ DDPLR++RA+RF ++ F ++E +A
Sbjct: 134 FGKLVDPFGGLDDLDRKWIRTPLDPDVTYGDDPLRMMRAVRFASQLGFRIEESSLEAIRR 193
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPL--QVEPEV-- 331
+ + + +S ER+ TE++ ++ +P + F ++FK L Q PE+
Sbjct: 194 NARRLEI---VSAERIHTELNKIILSPRPSRG---------FKLLFKTKLLHQFFPEMAA 241
Query: 332 LEGCE 336
L+G E
Sbjct: 242 LQGVE 246
>gi|429749269|ref|ZP_19282402.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429168700|gb|EKY10518.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 472
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 125/229 (54%), Gaps = 21/229 (9%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSA 137
IF + N +LET V GG+VRD LL K DIDI + G A VA+ L+
Sbjct: 12 IFQLISNVADGLSLETY--VIGGFVRDYLLQKKLPKDIDI-VSVGSGISLAENVAKRLAG 68
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
T + S F K+ TA +K L I+FV R E YS++SR P + GT ++
Sbjct: 69 TPKV--SVF----------KNFGTAMIKAETLDIEFVGARRESYSQHSRKPYVECGTLQD 116
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
D RRD TIN++ +++N ++ L G+ DL++ I TPL P T+ DDPLR++RAI
Sbjct: 117 DQNRRDFTINAMAFSLNKANYGALIDPFNGLLDLQNKIIRTPLDPVITYSDDPLRMMRAI 176
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
RF + +F ++E +A + + + IS+ER+ E++ +++ +P
Sbjct: 177 RFATQLNFTIEEHSLQAITEQKDRLKI---ISQERIVDELNKILASPKP 222
>gi|387789741|ref|YP_006254806.1| putative domain HDIG-containing protein [Solitalea canadensis DSM
3403]
gi|379652574|gb|AFD05630.1| putative domain HDIG-containing protein [Solitalea canadensis DSM
3403]
Length = 484
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 124/247 (50%), Gaps = 23/247 (9%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDI-ALDNMMGSEFATKVAEYLSA 137
IF + N+E V GG+VRD L + D+DI + N G EFA VA+ +
Sbjct: 9 IFKTISEQAAKANVEAY--VIGGFVRDIFLKRPSKDVDILVIGN--GVEFAKSVAKEVGL 64
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
A K+ TA +KL DL ++FV R E Y +SR P + GT ++
Sbjct: 65 EKRLAVF------------KNFGTAMLKLEDLEVEFVGARKESYRAHSRKPIVEEGTLQD 112
Query: 198 DAYRRDLTINSLFYNIN-TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
D RRD TIN++ +N S+ +L G+ DL++ I TPL P T+ DDPLR++RA
Sbjct: 113 DQNRRDFTINAMAIRLNDGSTFGELVDPFNGLIDLEYKTIRTPLDPDITYSDDPLRMMRA 172
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGL 314
IRF + F ++E+ KA ++ + + +S ER+ E++ ++ +P +
Sbjct: 173 IRFATQLHFTIEEKSLKAITKNKERITI---VSAERISDELNKIILSKKPSIGFNLLFDT 229
Query: 315 TLFWIVF 321
L +VF
Sbjct: 230 GLLELVF 236
>gi|282858987|ref|ZP_06268125.1| HDIG domain protein [Prevotella bivia JCVIHMP010]
gi|424898906|ref|ZP_18322454.1| putative domain HDIG-containing protein [Prevotella bivia DSM
20514]
gi|282588267|gb|EFB93434.1| HDIG domain protein [Prevotella bivia JCVIHMP010]
gi|388593616|gb|EIM33853.1| putative domain HDIG-containing protein [Prevotella bivia DSM
20514]
Length = 474
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 22/222 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQS 156
V GG+VRD L + DID+ + +GS +E + G+ A S F
Sbjct: 34 VVGGYVRDLFLERPSNDIDVVV---VGSGIQV-ASELKNILGKKAHLSVF---------- 79
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K+ TA +K D ++FV R E YS +SR P + GT E+D RRD TIN++ +N
Sbjct: 80 KNFGTAQVKYRDTEVEFVGARKESYSHDSRKPIVEDGTLEDDQNRRDFTINAMAVCLNKD 139
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ +L G+ DL G I TPL P TF DDPLR++R +RF + +F +D+E A
Sbjct: 140 RLGELVDPFGGVDDLWDGIIRTPLDPDITFSDDPLRMMRCVRFATQLNFFIDDE---TFA 196
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HICGL 314
+ E A IS ER+ E++ ++ P K H CGL
Sbjct: 197 ALERNAERIKIISGERIAEELNKIMMTKTPSKGFVDLHRCGL 238
>gi|395216542|ref|ZP_10401380.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Pontibacter sp. BAB1700]
gi|394455302|gb|EJF09789.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Pontibacter sp. BAB1700]
Length = 475
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 120/243 (49%), Gaps = 27/243 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS- 156
V GG+VRD +L + DID+ G E A +V+ L P P S
Sbjct: 28 VIGGFVRDLVLKRPSKDIDVVCVGN-GIELAERVSHKL--------------PHKPKVSV 72
Query: 157 -KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
KH TA ++ + ++FV R E Y E SR P + GT E+D RRD TIN+L ++N
Sbjct: 73 FKHFGTAMLRSGEWEVEFVGARKESYREESRKPDVETGTLEDDLKRRDFTINALGISLNE 132
Query: 216 SSVEDLTGR--GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+ L R G+ D+K I TPL P TF DDPLR++RAIRF ++ +F + E A
Sbjct: 133 GTYGQLIDRFDGVKDMKRKIIRTPLEPGITFSDDPLRMMRAIRFASQLNFDIAPETFDAI 192
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
++ + + +S+ER+ E++ +V P + L ++F P E L+
Sbjct: 193 IDNKERIKI---VSQERITDELNKIVLSPVPSYGFKLLFASGLLQLIF--PKMAE---LQ 244
Query: 334 GCE 336
G E
Sbjct: 245 GVE 247
>gi|429747154|ref|ZP_19280444.1| HDIG domain protein [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429163864|gb|EKY06049.1| HDIG domain protein [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 469
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 144/285 (50%), Gaps = 38/285 (13%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LL K DID+ + G A KVAE L P+ P S
Sbjct: 28 VIGGFVRDYLLEKKLPKDIDV-VSIGSGISLAEKVAERL--------------PNAPKVS 72
Query: 157 --KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
K+ TA +K L I+FV R E Y NSR P + GT ++D RRD TIN++ +++N
Sbjct: 73 IFKNFGTAMIKADGLDIEFVGARRESYEANSRKPYVESGTLQDDQNRRDFTINAMAFSLN 132
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ +L G+ DLK I TPL P T+ DDPLR++RAIRF + +F ++++ KA
Sbjct: 133 RDTFGELIDPFDGLGDLKRKLIRTPLDPDITYSDDPLRMMRAIRFATQLNFKIEKQSLKA 192
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFW----IVFKLPLQVE 328
++ + + IS ER+ E++ +++ +P GL L + + + LP +
Sbjct: 193 ITDNKERLKI---ISSERIVEELNKILASPKPS------IGLKLLYETGLLHYILPELI- 242
Query: 329 PEVLEGCEMF-CTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALF 372
L+G E + D W +++ + + N D L ++AAL
Sbjct: 243 --ALQGVEEHDGQRHKDNFWHTLEVVDNISENTDNLWL-RWAALL 284
>gi|218128766|ref|ZP_03457570.1| hypothetical protein BACEGG_00338 [Bacteroides eggerthii DSM 20697]
gi|217988994|gb|EEC55310.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Bacteroides eggerthii DSM 20697]
Length = 474
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 131/260 (50%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IELTTEELKQRFSDNIFGRISETADELGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE L+ G G S K+ TA +K + ++FV R E Y+
Sbjct: 57 GSGIA--MAEALAKR-----LGRGAHLS---VFKNFGTAQLKYHGTEVEFVGARKESYTH 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + G+ E+D RRD TIN+L +N +L G+ D++ I TPL P
Sbjct: 107 DSRKPVVEDGSLEDDQNRRDFTINALAVCLNRQRYGELVDPFGGMEDMREKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D++ ++ ++ + ++ ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNKERISI---ISRERIADELNKILLS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + + L ++F
Sbjct: 224 PVPSKGLIDLDRSGLLQLIF 243
>gi|189468554|ref|ZP_03017339.1| hypothetical protein BACINT_04957 [Bacteroides intestinalis DSM
17393]
gi|189436818|gb|EDV05803.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Bacteroides intestinalis DSM 17393]
Length = 476
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 123/260 (47%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ +
Sbjct: 2 IELTAEELKQHFSDDIFKRISETADELGLECY--VVGGYVRDIFLQRPSKDIDVVVVGS- 58
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G E A + + L A K+ TA +K + ++FV R E Y
Sbjct: 59 GIEMAEALGKRLGRGAHVA------------LFKNFGTAQVKYRGIEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N S +L GI DLK I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNQSRFGELVDPFGGIEDLKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D+ ++ + + ++ IS+ER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDTTFESLCRNCGRISI---ISKERIADELNKIILS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PIPSKGFIDLDRSGLLSLIF 243
>gi|336171370|ref|YP_004578508.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Lacinutrix sp. 5H-3-7-4]
gi|334725942|gb|AEH00080.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Lacinutrix sp. 5H-3-7-4]
Length = 472
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 121/231 (52%), Gaps = 25/231 (10%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLSA 137
IF + + + NL++ V GG+VRD LL + + DIDI G A +VA+ L
Sbjct: 11 IFKIISQSAKELNLDSY--VIGGFVRDYLLQRGNAKDIDIVAVGS-GIALAKQVAKNL-- 65
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P+ P K TA +K D+ ++FV R E Y+ENSR P + GT
Sbjct: 66 ------------PNKPKVQVFKTYGTAMLKYNDIEVEFVGARKESYNENSRNPVVENGTL 113
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
++D RRD +IN+L +++ + DL G+ DL++ I TPL P T+ DDPLR++R
Sbjct: 114 QDDQNRRDFSINALALDLSQDNFGDLLDPFNGVEDLQNKIIRTPLDPDITYSDDPLRMMR 173
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
AIRF + F +++E A + + + I++ER+ E++ ++ P
Sbjct: 174 AIRFATQLGFTIEKESLDAITRNNNRIKI---ITKERIVVELNKILESKTP 221
>gi|346226177|ref|ZP_08847319.1| tRNA nucleotidyltransferase [Anaerophaga thermohalophila DSM 12881]
Length = 469
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 111/216 (51%), Gaps = 19/216 (8%)
Query: 91 NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIP 150
N + + V GG+VRD +L + DID+ + G E A +VA+ L + FG
Sbjct: 19 NCDKEVYVIGGFVRDIVLNRPTTDIDVVVVGS-GIELAQQVAKKLGGVKVSVFRNFG--- 74
Query: 151 SNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLF 210
TA K L ++FV R E Y NSR P + GT ++D RRD TIN+L
Sbjct: 75 ----------TAMFKYRGLDVEFVGARKESYQRNSRKPIVEDGTLKDDQNRRDFTINALA 124
Query: 211 YNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
++N + L G+ DL+ G I TP P TF DDPLR+LRA+RF + F ++E+
Sbjct: 125 LSLNKKTFGKLLDPFNGMKDLEEGIIRTPQDPMVTFSDDPLRMLRAVRFATQLRFRIEEK 184
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ + + + + +S ERV E++ ++ ++P
Sbjct: 185 TFEGIIAQKERLKI---VSMERVSEELNKILMADKP 217
>gi|423278670|ref|ZP_17257584.1| hypothetical protein HMPREF1203_01801 [Bacteroides fragilis HMW
610]
gi|404585662|gb|EKA90266.1| hypothetical protein HMPREF1203_01801 [Bacteroides fragilis HMW
610]
Length = 481
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGQISETADMLGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K + ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQVKYHGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N +L G+ DLK I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKERFGELVDPFGGMNDLKEKVIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D++ ++ + + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNRERIEI---ISRERIADELNKIMLS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PIPSKGFIDLDRSGLLALIF 243
>gi|313148884|ref|ZP_07811077.1| tRNA nucleotidyltransferase [Bacteroides fragilis 3_1_12]
gi|313137651|gb|EFR55011.1| tRNA nucleotidyltransferase [Bacteroides fragilis 3_1_12]
Length = 483
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 4 IELTQEELKQHFSEPIFGQISETADMLGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 58
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K + ++FV R E Y
Sbjct: 59 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQVKYHGTEVEFVGARKESYQR 108
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N +L G+ DLK I TPL P
Sbjct: 109 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKERFGELVDPFGGMNDLKEKVIRTPLDPD 168
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D++ ++ + + + ISRER+ E++ ++
Sbjct: 169 ITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNRERIEI---ISRERIADELNKIMLS 225
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 226 PIPSKGFIDLDRSGLLALIF 245
>gi|423251468|ref|ZP_17232481.1| hypothetical protein HMPREF1066_03491 [Bacteroides fragilis
CL03T00C08]
gi|423254792|ref|ZP_17235722.1| hypothetical protein HMPREF1067_02366 [Bacteroides fragilis
CL03T12C07]
gi|392650786|gb|EIY44453.1| hypothetical protein HMPREF1066_03491 [Bacteroides fragilis
CL03T00C08]
gi|392653358|gb|EIY47014.1| hypothetical protein HMPREF1067_02366 [Bacteroides fragilis
CL03T12C07]
Length = 481
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGQISETADALGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K + ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQVKCHGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N +L G+ DLK I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKGRFGELVDPFGGMNDLKEKIIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D++ ++ + + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNRERIEI---ISRERIADELNKIMLS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PIPSKGFIDLDRSGLLELIF 243
>gi|60682903|ref|YP_213047.1| poly(A) polymerase [Bacteroides fragilis NCTC 9343]
gi|383115961|ref|ZP_09936714.1| hypothetical protein BSHG_3004 [Bacteroides sp. 3_2_5]
gi|423270514|ref|ZP_17249485.1| hypothetical protein HMPREF1079_02567 [Bacteroides fragilis
CL05T00C42]
gi|423275254|ref|ZP_17254199.1| hypothetical protein HMPREF1080_02852 [Bacteroides fragilis
CL05T12C13]
gi|423285342|ref|ZP_17264224.1| hypothetical protein HMPREF1204_03762 [Bacteroides fragilis HMW
615]
gi|60494337|emb|CAH09133.1| putative polyA polymerase [Bacteroides fragilis NCTC 9343]
gi|251945134|gb|EES85572.1| hypothetical protein BSHG_3004 [Bacteroides sp. 3_2_5]
gi|392698438|gb|EIY91620.1| hypothetical protein HMPREF1079_02567 [Bacteroides fragilis
CL05T00C42]
gi|392702735|gb|EIY95880.1| hypothetical protein HMPREF1080_02852 [Bacteroides fragilis
CL05T12C13]
gi|404578857|gb|EKA83575.1| hypothetical protein HMPREF1204_03762 [Bacteroides fragilis HMW
615]
Length = 481
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGQISETADALGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K + ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQVKCHGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N +L G+ DLK I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKGRFGELVDPFGGMNDLKEKIIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D++ ++ + + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNRERIEI---ISRERIADELNKIMLS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PIPSKGFIDLDRSGLLELIF 243
>gi|53714925|ref|YP_100917.1| tRNA nucleotidyltransferase [Bacteroides fragilis YCH46]
gi|265766778|ref|ZP_06094607.1| tRNA adenylyltransferase [Bacteroides sp. 2_1_16]
gi|336410743|ref|ZP_08591217.1| hypothetical protein HMPREF1018_03234 [Bacteroides sp. 2_1_56FAA]
gi|375359686|ref|YP_005112458.1| putative polyA polymerase [Bacteroides fragilis 638R]
gi|423260248|ref|ZP_17241170.1| hypothetical protein HMPREF1055_03447 [Bacteroides fragilis
CL07T00C01]
gi|423266382|ref|ZP_17245384.1| hypothetical protein HMPREF1056_03071 [Bacteroides fragilis
CL07T12C05]
gi|52217790|dbj|BAD50383.1| tRNA nucleotidyltransferase [Bacteroides fragilis YCH46]
gi|263253155|gb|EEZ24631.1| tRNA adenylyltransferase [Bacteroides sp. 2_1_16]
gi|301164367|emb|CBW23925.1| putative polyA polymerase [Bacteroides fragilis 638R]
gi|335943956|gb|EGN05784.1| hypothetical protein HMPREF1018_03234 [Bacteroides sp. 2_1_56FAA]
gi|387775394|gb|EIK37501.1| hypothetical protein HMPREF1055_03447 [Bacteroides fragilis
CL07T00C01]
gi|392700959|gb|EIY94120.1| hypothetical protein HMPREF1056_03071 [Bacteroides fragilis
CL07T12C05]
Length = 481
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGQISETADALGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K + ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQVKCHGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N +L G+ DLK I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKGRFGELVDPFGGMNDLKEKIIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D++ ++ + + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNRERIEI---ISRERIADELNKIMLS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PIPSKGFIDLDRSGLLELIF 243
>gi|393780261|ref|ZP_10368479.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392608733|gb|EIW91571.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 469
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 144/283 (50%), Gaps = 34/283 (12%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LL K DID+ + G A KVAE L P+ P S
Sbjct: 28 VIGGFVRDYLLEKKLPKDIDV-VSIGSGISLAEKVAERL--------------PNAPKVS 72
Query: 157 --KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
K+ TA +K L I+FV R E Y NSR P + GT ++D RRD TIN++ +++N
Sbjct: 73 IFKNFGTAMIKADGLDIEFVGARRESYEANSRKPYVESGTLQDDQNRRDFTINAMAFSLN 132
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ +L G+ DLK I TPL P T+ DDPLR++RAIRF + +F ++++ KA
Sbjct: 133 RDTFGELIDPFDGLDDLKRKLIRTPLDPDITYSDDPLRMMRAIRFATQLNFKIEKQSLKA 192
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEV- 331
++ + + IS ER+ E++ +++ +P GL L + L + PE+
Sbjct: 193 ITDNKERLKI---ISNERIVEELNKILASAKPS------IGLKLLYETGLLHY-ILPELI 242
Query: 332 -LEGCEMF-CTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALF 372
L+G E + D W +++ + + N D L ++AAL
Sbjct: 243 ALQGVEEHDGQRHKDNFWHTLEVVDNISENTDNLWL-RWAALL 284
>gi|325269379|ref|ZP_08135996.1| polyA polymerase family protein [Prevotella multiformis DSM 16608]
gi|324988300|gb|EGC20266.1| polyA polymerase family protein [Prevotella multiformis DSM 16608]
Length = 485
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 121/251 (48%), Gaps = 30/251 (11%)
Query: 71 ELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATK 130
EL D + IF + + LE V GG+VRD L + DID+ +
Sbjct: 22 ELLDND--IFHHISDAADRLGLECY--VVGGYVRDLFLERPSNDIDVVV----------- 66
Query: 131 VAEYLSATGETAPSGF-GVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRI 187
+G SG G++ S ++ TA +K D ++FV R E YS +SR
Sbjct: 67 -----VGSGIQVASGLKGILGRKAHLSVFRNFGTAQVKYKDTEVEFVGARKESYSHDSRK 121
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFL 245
P + GT E+D RRD TIN+L +N +L G+ DL G I TPL P TF
Sbjct: 122 PAVEDGTLEDDQNRRDFTINALAVCLNRERFGELVDPFGGVDDLWDGIIRTPLDPDVTFS 181
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
DDPLR++R +RF A+ +F+++EE +A E A IS ER+ E++ ++ P
Sbjct: 182 DDPLRMMRCVRFAAQLNFLIEEETFEAL---ERNAERIRIISGERIEEELNKIMMTPTPS 238
Query: 306 KAMTHI--CGL 314
K + CGL
Sbjct: 239 KGFVELYRCGL 249
>gi|424664692|ref|ZP_18101728.1| hypothetical protein HMPREF1205_00567 [Bacteroides fragilis HMW
616]
gi|404575225|gb|EKA79968.1| hypothetical protein HMPREF1205_00567 [Bacteroides fragilis HMW
616]
Length = 481
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGQISETADVLGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K + ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHVAVF-----KNFGTAQVKYHGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N +L G+ DLK I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKERFGELVDPFGGMNDLKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D++ ++ + + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNRERIEI---ISRERIADELNKIMLS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PIPSKGFIDLDRSGLLELIF 243
>gi|395804044|ref|ZP_10483285.1| tRNA nucleotidyltransferase [Flavobacterium sp. F52]
gi|395433688|gb|EJF99640.1| tRNA nucleotidyltransferase [Flavobacterium sp. F52]
Length = 487
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 124/237 (52%), Gaps = 25/237 (10%)
Query: 73 TDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKV 131
T + KIF + + N+++ V GG+VRD LL + DID+ G E A KV
Sbjct: 19 TALQNKIFEIISKASQELNVDSY--VIGGFVRDLLLNRGSKKDIDVVAVGS-GIELALKV 75
Query: 132 AEYLSATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
++ L P+ P K TA ++ D I+FV R E Y+ +SR P
Sbjct: 76 SDLL--------------PNKPKVQVFKTYGTAMLRFEDTDIEFVGARKESYTRDSRNPI 121
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDD 247
+ GT ++D RRD TIN+L ++N+++ DL G+ DL++ I TPL P T+ DD
Sbjct: 122 VENGTLQDDQNRRDFTINALALSLNSTNFGDLLDPFNGLTDLENKTIKTPLDPDITYSDD 181
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
PLR+LRAIRF + +F ++E A + + + IS ER+ E++ ++ ++P
Sbjct: 182 PLRMLRAIRFATQLNFEIEENSLNAITKNAERIKI---ISGERIVDELNKILLTDKP 235
>gi|363582660|ref|ZP_09315470.1| tRNA nucleotidyltransferase [Flavobacteriaceae bacterium HQM9]
Length = 474
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 114/212 (53%), Gaps = 23/212 (10%)
Query: 98 VAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LL + + DIDI G E A KV+E L P+ P
Sbjct: 31 VIGGFVRDFLLKRGEVKDIDIVTVGS-GIELALKVSELL--------------PNKPKVQ 75
Query: 157 --KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
K TA ++ ++ I+FV R E Y+ENSR P + GT E+D RRD TIN+L ++N
Sbjct: 76 VFKTYGTAMLRYQNIDIEFVGARKESYNENSRNPVVENGTLEDDQNRRDFTINALALSLN 135
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
++ DL G DL I TPL P T+ DDPLR++RAIRF + +F +++E A
Sbjct: 136 EATYGDLIDPFGGSKDLDKKIIRTPLEPGITYSDDPLRMMRAIRFATQLNFKIEKESLDA 195
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ + + + I++ER+ E++ ++S P
Sbjct: 196 IKAHQERIKI---ITKERIVVELNKILSSPIP 224
>gi|423130781|ref|ZP_17118456.1| hypothetical protein HMPREF9714_01856 [Myroides odoratimimus CCUG
12901]
gi|423134480|ref|ZP_17122127.1| hypothetical protein HMPREF9715_01902 [Myroides odoratimimus CIP
101113]
gi|371644640|gb|EHO10171.1| hypothetical protein HMPREF9714_01856 [Myroides odoratimimus CCUG
12901]
gi|371647237|gb|EHO12747.1| hypothetical protein HMPREF9715_01902 [Myroides odoratimimus CIP
101113]
Length = 478
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 121/234 (51%), Gaps = 25/234 (10%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSA 137
IF + N+++ V GG+VRD LL +D DIDI G E A KV+E L
Sbjct: 15 IFDYISKAAESLNVDSY--VIGGFVRDFLLKRDSKKDIDIVAVGS-GIELALKVSELL-- 69
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P+ P K+ TA ++ D+ I+FV R E Y +SR P + GT
Sbjct: 70 ------------PNKPKVQVFKNYGTAMLRYDDIDIEFVGARKESYHFDSRKPVVEDGTL 117
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
E+D RRD TIN+L ++ + +L G+ADL + I TPL P T+ DDPLR++R
Sbjct: 118 EDDQNRRDFTINALAISLKKETYGELVDPFNGVADLANKIIRTPLDPDITYSDDPLRMMR 177
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
AIRF + DF++++ + ++ + + IS ER+ E++ ++ +P K
Sbjct: 178 AIRFATQLDFMIEQNSLDSITANHQRLEI---ISGERIVDELNKILMSKKPSKG 228
>gi|423221010|ref|ZP_17207504.1| hypothetical protein HMPREF1061_04277 [Bacteroides caccae
CL03T12C61]
gi|392622249|gb|EIY16381.1| hypothetical protein HMPREF1061_04277 [Bacteroides caccae
CL03T12C61]
Length = 477
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGQIAETADALGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQVKYKGTEVEFVGARKESYHR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N + +L G+ D+K I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKARFGELVDPFGGMEDMKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D++ ++ + + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNRERINI---ISRERIADELNKIILS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PVPSKGFIDLERSGLLSLIF 243
>gi|423327190|ref|ZP_17304998.1| hypothetical protein HMPREF9711_00572 [Myroides odoratimimus CCUG
3837]
gi|404607760|gb|EKB07262.1| hypothetical protein HMPREF9711_00572 [Myroides odoratimimus CCUG
3837]
Length = 478
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 121/234 (51%), Gaps = 25/234 (10%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSA 137
IF + N+++ V GG+VRD LL +D DIDI G E A KV+E L
Sbjct: 15 IFDYISKAAESLNVDSY--VIGGFVRDFLLKRDSKKDIDIVAVGS-GIELALKVSELL-- 69
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P+ P K+ TA ++ D+ I+FV R E Y +SR P + GT
Sbjct: 70 ------------PNKPKVQVFKNYGTAMLRYDDIDIEFVGARKESYHFDSRKPVVEDGTL 117
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
E+D RRD TIN+L ++ + +L G+ADL + I TPL P T+ DDPLR++R
Sbjct: 118 EDDQNRRDFTINALAISLKKETYGELVDPFNGVADLANKIIRTPLDPDITYSDDPLRMMR 177
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
AIRF + DF++++ + ++ + + IS ER+ E++ ++ +P K
Sbjct: 178 AIRFATQLDFMIEQNSLDSITANHQRLEI---ISGERIVDELNKILMSKKPSKG 228
>gi|373110182|ref|ZP_09524451.1| hypothetical protein HMPREF9712_02044 [Myroides odoratimimus CCUG
10230]
gi|371642824|gb|EHO08382.1| hypothetical protein HMPREF9712_02044 [Myroides odoratimimus CCUG
10230]
Length = 478
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 121/234 (51%), Gaps = 25/234 (10%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSA 137
IF + N+++ V GG+VRD LL +D DIDI G E A KV+E L
Sbjct: 15 IFDYISKAAESLNVDSY--VIGGFVRDFLLKRDSKKDIDIVAVGS-GIELALKVSELL-- 69
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P+ P K+ TA ++ D+ I+FV R E Y +SR P + GT
Sbjct: 70 ------------PNKPKVQVFKNYGTAMLRYDDIDIEFVGARKESYHFDSRKPVVEDGTL 117
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
E+D RRD TIN+L ++ + +L G+ADL + I TPL P T+ DDPLR++R
Sbjct: 118 EDDQNRRDFTINALAISLKKETYGELVDPFNGVADLANKIIRTPLDPDITYSDDPLRMMR 177
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
AIRF + DF++++ + ++ + + IS ER+ E++ ++ +P K
Sbjct: 178 AIRFATQLDFMIEQNSLDSITANHQRLEI---ISGERIVDELNKILMSKKPSKG 228
>gi|153809425|ref|ZP_01962093.1| hypothetical protein BACCAC_03739 [Bacteroides caccae ATCC 43185]
gi|149128011|gb|EDM19233.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Bacteroides caccae ATCC 43185]
Length = 477
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGQIAETADALGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQVKYKGTEVEFVGARKESYHR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N + +L G+ D+K I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKARFGELVDPFGGMEDMKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D++ ++ + + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNRERINI---ISRERIADELNKIILS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PVPSKGFIDLERSGLLSLIF 243
>gi|329961598|ref|ZP_08299657.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Bacteroides fluxus YIT 12057]
gi|328531590|gb|EGF58424.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Bacteroides fluxus YIT 12057]
Length = 476
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 35/277 (12%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IELTAEELKQYFSDDIFKRISGTADKLGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G + G V K+ TA +K + ++FV R E Y+
Sbjct: 57 GSGIA--MAE---ALGRSLGRGAHV-----SVFKNFGTAQLKYHGTEVEFVGARKESYTH 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN++ +N++ +L G+ DLK I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINAMAVCLNSARYGELVDPFGGMEDLKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D+ ++ + + ++ IS+ER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDVTFESLQRNRDRISI---ISKERIADELNKILLS 223
Query: 302 NQPVKAMTHICGLTLFWIVFKLPLQVEPEV--LEGCE 336
P K + L ++F PE+ L+G E
Sbjct: 224 PVPSKGFIDLDRSGLLELIF-------PELVALQGVE 253
>gi|317503931|ref|ZP_07961939.1| polyA polymerase family protein [Prevotella salivae DSM 15606]
gi|315664957|gb|EFV04616.1| polyA polymerase family protein [Prevotella salivae DSM 15606]
Length = 483
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 114/222 (51%), Gaps = 22/222 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQS 156
V GG+VRD L + DID+ + +GS +E S G+ A S F
Sbjct: 34 VVGGYVRDLFLERPSNDIDVVV---VGSGIQV-ASELKSRLGKRAHLSVF---------- 79
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
++ TA +K + + I+FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 80 RNFGTAQVKFHGMEIEFVGARKESYSHDSRKPHVEDGTLEDDQNRRDFTINALAVCLNKE 139
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
L G+ D++ G I TPL P TF DDPLR+LR IRF + +F +++E +A
Sbjct: 140 RFGQLVDPFEGVYDMEDGIIRTPLDPDVTFSDDPLRMLRCIRFATQLNFFIEDETFEALQ 199
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
+ + + IS ER+ E++ ++ P K + CGL
Sbjct: 200 RNAERIKI---ISGERIDDELNKIMLTKTPSKGFIDLYRCGL 238
>gi|424841053|ref|ZP_18265678.1| tRNA nucleotidyltransferase/poly(A) polymerase [Saprospira grandis
DSM 2844]
gi|395319251|gb|EJF52172.1| tRNA nucleotidyltransferase/poly(A) polymerase [Saprospira grandis
DSM 2844]
Length = 476
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 128/257 (49%), Gaps = 22/257 (8%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNM-MGSEF 127
+ E+T E +F + + T V GG+VRD+LL + D+ L + G E
Sbjct: 2 QFEMTAQEEALFKTIAQAAQKLGFPTY--VIGGYVRDRLLARSTKGKDLDLVCVGSGIEL 59
Query: 128 ATKVAEYLSATGETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSR 186
A +A+ L + + FG TA + D I+ V R E Y SR
Sbjct: 60 AKAIAKSLKPQPKVVTYARFG-------------TAALHHKDWEIELVGARKESYRPESR 106
Query: 187 IPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATF 244
P + G+ E+D RRD TIN+L ++N + L G+ADL+ I TPL P+ TF
Sbjct: 107 KPIVEDGSLEDDQNRRDFTINALAISLNEADFGQLLDPFGGLADLEAKCIRTPLAPETTF 166
Query: 245 LDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
DDPLR++RAIRF ++ F ++E+ A S+ + + IS+ER+ TE++ ++ ++P
Sbjct: 167 SDDPLRMMRAIRFASQLGFEIEEKTFAAIQSERERIHI---ISQERISTELNKIMLSSKP 223
Query: 305 VKAMTHICGLTLFWIVF 321
++ + L ++F
Sbjct: 224 SLGLSLLFKSGLLELIF 240
>gi|298479673|ref|ZP_06997873.1| polyA polymerase family protein [Bacteroides sp. D22]
gi|298274063|gb|EFI15624.1| polyA polymerase family protein [Bacteroides sp. D22]
Length = 477
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 133/275 (48%), Gaps = 31/275 (11%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T +E V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGQIAETADALGMECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQVKYRGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N + +L G+ D+K I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKARFGELVDPFGGMEDMKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + F +D++ ++ ++ + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLGFYIDDDTFESLCRNKERIEI---ISRERIADELNKIILS 223
Query: 302 NQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCE 336
P K + L ++F E VL+G E
Sbjct: 224 PIPSKGFIDLERSGLLPLIFP-----EFAVLQGVE 253
>gi|406662835|ref|ZP_11070919.1| Multifunctional CCA protein [Cecembia lonarensis LW9]
gi|405553142|gb|EKB48422.1| Multifunctional CCA protein [Cecembia lonarensis LW9]
Length = 472
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQS 156
V GG+VRD +L + C DID G A KVA+ + E P S F
Sbjct: 29 VVGGYVRDLILNRPCKDIDFVCVGS-GINLAQKVAD---SYQEHVPLSVF---------- 74
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K+ TA ++L D ++FV R E Y +SR P + GT +ED RRD TIN++ ++N
Sbjct: 75 KNFGTANIRLEDWEVEFVGARRESYRHDSRKPIVEDGTLQEDLERRDFTINAMAVSVNAH 134
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ +L GI+D+K I TP P TF DDPLR++RAIRF A+ F ++ + A
Sbjct: 135 NFGELIDPFNGISDIKSKTIKTPTDPIITFSDDPLRMMRAIRFAAQLHFDIEPDTFMAIV 194
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
D + + +S ER+ E+ ++ +P G L + V KL Q PE++E
Sbjct: 195 HDAHRLQI---VSAERIMDELTKIIMTPKPS------YGFKLLF-VSKLLHQFFPEMVE 243
>gi|336398789|ref|ZP_08579589.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Prevotella multisaccharivorax DSM 17128]
gi|336068525|gb|EGN57159.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Prevotella multisaccharivorax DSM 17128]
Length = 486
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ + +GS A G + S F K
Sbjct: 34 VVGGYVRDLFLERPSNDIDVVV---VGSGIEVAKAFKRLLKGRASLSVF----------K 80
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA +K ++FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 81 NFGTAQVKWRGHEVEFVGARRESYSHDSRKPHVENGTLEDDQNRRDFTINALAVCLNKDR 140
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ DL+ G I TPL P TF DDPLR++R +RF + F +++E +A
Sbjct: 141 FGELIDPFDGVCDLQDGIIRTPLDPNITFSDDPLRMMRCVRFATQLKFYIEDETFEAL-- 198
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HICGL 314
E A IS ER+ E++ ++ QP + H CGL
Sbjct: 199 -ERNADRIKIISGERISEELNKIMMTPQPSRGFVDLHRCGL 238
>gi|305664812|ref|YP_003861099.1| putative polyA polymerase [Maribacter sp. HTCC2170]
gi|88707934|gb|EAR00173.1| putative polyA polymerase [Maribacter sp. HTCC2170]
Length = 478
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 136/265 (51%), Gaps = 34/265 (12%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSA 137
IF L + LE+ V GG+VRD +L + + DIDI +GS A +AE +++
Sbjct: 13 IFKILSDAASGLALESY--VIGGFVRDYILDRGTHKDIDIV---SIGSGIA--LAEKVAS 65
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
++P NP S K+ TA ++ +D+ ++FV R E Y +SR P + GT
Sbjct: 66 ----------MLPGNPKISIFKNFGTAMLRHHDMELEFVGARKESYQRDSRKPIVEDGTL 115
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
+ED RRD TIN+L ++N + DL G+ DL I TPL P T+ DDPLR++R
Sbjct: 116 KEDQERRDFTINALALSLNKENFGDLLDPFEGVLDLDKKIIRTPLEPCVTYSDDPLRMMR 175
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HI 311
AIRF + +F + EL+ A E K + IS ER E+ +++ +P + H
Sbjct: 176 AIRFATQLNFEI--ELRSLQAITENKERIKI-ISAERTVDELHKIMACEKPSIGFSLLHN 232
Query: 312 CGLTLFWIVFKLPLQVEPEVLEGCE 336
GL + + LP E LEG E
Sbjct: 233 TGL----LDYILP---ELTALEGIE 250
>gi|347536568|ref|YP_004843993.1| tRNA nucleotidyltransferase [Flavobacterium branchiophilum FL-15]
gi|345529726|emb|CCB69756.1| tRNA nucleotidyltransferase [Flavobacterium branchiophilum FL-15]
Length = 472
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 118/235 (50%), Gaps = 33/235 (14%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSA 137
IF + H +E V GG+VRD LL + DID+ G A KVAE L
Sbjct: 11 IFEIITKASTHLGIECY--VIGGFVRDLLLNRAFKKDIDVVAVGS-GIALALKVAEML-- 65
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P+NP K TA ++ D I+FV R E Y SR P + GT
Sbjct: 66 ------------PNNPKVQVFKTYGTAMLRFKDTDIEFVGARKESYHFESRNPVVENGTL 113
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
E+D RRD TIN+L ++N S+ DL G+ DLK+ I TPL P TF DDPLR+LR
Sbjct: 114 EDDQNRRDFTINALALSLNQSNYGDLIDPFDGVYDLKNKIIQTPLDPDITFSDDPLRMLR 173
Query: 254 AIRFGARFDFILD----EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
AIRF + F ++ E ++K A+ ++ IS ER+ E++ ++ ++P
Sbjct: 174 AIRFATQLHFDINSLSFESIQKNASRIKI-------ISGERIVDELNKILDTSKP 221
>gi|375255191|ref|YP_005014358.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Tannerella forsythia ATCC 43037]
gi|363407744|gb|AEW21430.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Tannerella forsythia ATCC 43037]
Length = 475
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 116/239 (48%), Gaps = 22/239 (9%)
Query: 80 FSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG 139
F + T LET V GG+VRD L + DID+ G E A VA+ L
Sbjct: 17 FPLISETADELGLETY--VIGGYVRDIFLRRPSKDIDVVTVGS-GIELAKAVAKRLGRKA 73
Query: 140 ETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDA 199
+ K+ TA +K +L ++FV R E Y +SR P + GT E+D
Sbjct: 74 HLS------------VFKNFGTAQVKHGELELEFVGARKESYRRDSRKPIVEDGTLEDDQ 121
Query: 200 YRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRF 257
RRD TIN+L +N +L G+ D++ +IVTPL P TF DDPLR++RA+RF
Sbjct: 122 NRRDFTINALALCLNGDRYGELVDPFGGVEDMEDLRIVTPLDPDTTFNDDPLRMMRAVRF 181
Query: 258 GARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
++ F +D A + + + IS+ER+ E++ +V +P + CGL
Sbjct: 182 ASQLGFFIDPNTFDAMTRNRERIGI---ISKERIADELNKIVLSPKPSIGFELLDKCGL 237
>gi|237720154|ref|ZP_04550635.1| tRNA nucleotidyltransferase [Bacteroides sp. 2_2_4]
gi|383112007|ref|ZP_09932808.1| hypothetical protein BSGG_3673 [Bacteroides sp. D2]
gi|423289871|ref|ZP_17268721.1| hypothetical protein HMPREF1069_03764 [Bacteroides ovatus
CL02T12C04]
gi|423296773|ref|ZP_17274843.1| hypothetical protein HMPREF1070_03508 [Bacteroides ovatus
CL03T12C18]
gi|229450706|gb|EEO56497.1| tRNA nucleotidyltransferase [Bacteroides sp. 2_2_4]
gi|313696138|gb|EFS32973.1| hypothetical protein BSGG_3673 [Bacteroides sp. D2]
gi|392666613|gb|EIY60126.1| hypothetical protein HMPREF1069_03764 [Bacteroides ovatus
CL02T12C04]
gi|392669150|gb|EIY62641.1| hypothetical protein HMPREF1070_03508 [Bacteroides ovatus
CL03T12C18]
Length = 477
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T +E V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGQIAETADTLGMECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKQLGRGAHV-----SVFKNFGTAQVKYRGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N + +L G+ D+K I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKARFGELVDPFGGLEDMKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + F +D++ ++ ++ + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLGFYIDDDTFESLCRNKERIEI---ISRERIADELNKIILS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PIPSKGFIDLERSGLLSLIF 243
>gi|380696589|ref|ZP_09861448.1| tRNA nucleotidyltransferase [Bacteroides faecis MAJ27]
Length = 477
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGQIAETADALELECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQVKYKGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN++ +N + +L G+ D+K I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINAMAVCLNKARFGELVDPFGGMEDMKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + F +D++ ++ ++ + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLGFYIDDDTFESLCRNKERIEI---ISRERIADELNKIILS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PIPSKGFVELERSGLLPLIF 243
>gi|282880095|ref|ZP_06288815.1| hypothetical protein HMPREF9019_1920 [Prevotella timonensis CRIS
5C-B1]
gi|281305968|gb|EFA98008.1| hypothetical protein HMPREF9019_1920 [Prevotella timonensis CRIS
5C-B1]
Length = 475
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 119/244 (48%), Gaps = 24/244 (9%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL 135
+ IF + H ++E V GG+VRD L + DID+ + G E A + + L
Sbjct: 14 DNDIFHQISAVADHLDVECY--VVGGYVRDLFLERPSNDIDVVVVGS-GIEVAAALKQKL 70
Query: 136 SATGE-TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGT 194
+ FG TA +K + I+FV R E YS +SR P + GT
Sbjct: 71 GKRAYLSVFRNFG-------------TAQIKFKGMEIEFVGARKESYSHDSRKPVVENGT 117
Query: 195 AEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVL 252
E+D RRD TIN+L +N + +L G+ DL+ G I TPL P TF DDPLR+L
Sbjct: 118 LEDDQNRRDFTINALAVCLNQARFGELVDPFDGLLDLEDGLIRTPLDPDITFSDDPLRML 177
Query: 253 RAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI- 311
R +RF + F +++E +A + + + +S ER+ E++ ++ + P + +
Sbjct: 178 RCVRFSTQLKFFIEDETFEALRRNAERIKI---VSGERIADELNKIMMTDHPSRGFIELY 234
Query: 312 -CGL 314
CGL
Sbjct: 235 RCGL 238
>gi|317475446|ref|ZP_07934710.1| poly A polymerase head domain-containing protein [Bacteroides
eggerthii 1_2_48FAA]
gi|316908474|gb|EFV30164.1| poly A polymerase head domain-containing protein [Bacteroides
eggerthii 1_2_48FAA]
Length = 474
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IELTTEELKLRFSDNIFGRISETADELGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE L+ G G S K+ TA +K + ++FV R E Y+
Sbjct: 57 GSGIA--MAEALAKR-----LGRGAHLS---VFKNFGTAQLKYHGTEVEFVGARKESYTH 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + G+ E+D RRD TIN+L +N +L G+ D++ I TPL P
Sbjct: 107 DSRKPVVEDGSLEDDQNRRDFTINALAVCLNRQRYGELVDPFGGMEDMREKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D++ ++ ++ + ++ IS+ER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDDTFESLCRNKERISI---ISKERIADELNKILLS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + + L ++F
Sbjct: 224 PVPSKGLIDLDRSGLLQLIF 243
>gi|255036177|ref|YP_003086798.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Dyadobacter fermentans DSM 18053]
gi|254948933|gb|ACT93633.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Dyadobacter fermentans DSM 18053]
Length = 471
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 123/241 (51%), Gaps = 20/241 (8%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG+VRD +L ++ DIDI + G E A VA G P F + K
Sbjct: 29 IIGGFVRDLILKRNSKDIDI-VSIGSGIELAEMVA------GRLGPDVFVSV------FK 75
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA ++ DL I+FV R E Y SR P + GT +D RRD TIN++ ++N +
Sbjct: 76 NFGTAQIRQGDLEIEFVGARKESYRSESRKPAVEDGTLADDQNRRDFTINAMGISLNAGT 135
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G++DL+ I TPL P+ TF DDPLR++RAIRF ++ +F ++ + A
Sbjct: 136 FGELVDPFEGMSDLRKKIIRTPLDPEITFSDDPLRMMRAIRFASQLNFDIEPDTFDAIVK 195
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGC 335
+ + ++ +S ER+ E++ ++ P + L I+F P VE + +E
Sbjct: 196 MKDRISI---VSMERISDELNKIIRSKTPSYGFKLLYHAGLLAIIF--PEMVELQGVEHI 250
Query: 336 E 336
E
Sbjct: 251 E 251
>gi|399026668|ref|ZP_10728357.1| putative domain HDIG-containing protein [Flavobacterium sp. CF136]
gi|398075904|gb|EJL67004.1| putative domain HDIG-containing protein [Flavobacterium sp. CF136]
Length = 482
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 127/248 (51%), Gaps = 28/248 (11%)
Query: 62 VVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALD 120
+ +Q K L T IF + + N+++ V GG+VRD LL + DID+
Sbjct: 1 MAIQTNYKTALQHT---IFGIISQASQELNVDSY--VIGGFVRDLLLNRGSKKDIDVVAV 55
Query: 121 NMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRC 178
G E A KV++ L P NP K TA ++ D I+FV R
Sbjct: 56 GS-GIELALKVSQLL--------------PKNPKVQVFKTYGTAMLRFEDTDIEFVGARK 100
Query: 179 EDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVT 236
E Y+ +SR P + GT E+D RRD TIN+L ++N + DL+ G+ADL++ I T
Sbjct: 101 ESYNFDSRNPLVENGTLEDDQNRRDFTINALALSLNEKTFGDLSDPFDGLADLENKIIKT 160
Query: 237 PLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEID 296
PL P T+ DDPLR+LRAIRF + F +++ A + + + IS ER+ E++
Sbjct: 161 PLDPSITYSDDPLRMLRAIRFATQLGFEIEKNSLDAITKNADRINI---ISGERIVDELN 217
Query: 297 LMVSGNQP 304
++S ++P
Sbjct: 218 KILSTDKP 225
>gi|256424923|ref|YP_003125576.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Chitinophaga pinensis DSM 2588]
gi|256039831|gb|ACU63375.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Chitinophaga pinensis DSM 2588]
Length = 483
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 27/222 (12%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG+VRDK+L + D+D+ G A KVA Y + +G
Sbjct: 43 GGFVRDKILNRRTKDMDVVCVGD-GIALAHKVAGYFDNAKVSFFKTYG------------ 89
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVE 219
TA +K DL I+FV R E Y SR P + GT +D RRD TIN+L ++N +
Sbjct: 90 -TAQVKWNDLEIEFVGARKESYRHESRNPDVEPGTLRDDQLRRDFTINALAISLNEADYG 148
Query: 220 DLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDE 277
L GIADL+ I TPL P TF+DDPLR++RAIRF ++ F + EE K +
Sbjct: 149 SLVDPFGGIADLEAKIIRTPLEPAQTFIDDPLRMMRAIRFASQLQFTISEESFKGIKENA 208
Query: 278 VKAALAAKISRERVGTEID-LMVSGNQPVKAMTHICGLTLFW 318
+ + IS+ER+ E + +M+S PV ++ GL L +
Sbjct: 209 ERIKI---ISQERITDEFNKIMLS---PVPSV----GLDLLY 240
>gi|340622753|ref|YP_004741205.1| phosphatase [Capnocytophaga canimorsus Cc5]
gi|339903019|gb|AEK24098.1| Phosphatase [Capnocytophaga canimorsus Cc5]
Length = 472
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 125/246 (50%), Gaps = 32/246 (13%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LLG+ DIDI G A KVAE L NP S
Sbjct: 30 VVGGFVRDFLLGRRLPKDIDIVCIGS-GISLAEKVAEKLCG--------------NPKVS 74
Query: 157 --KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
K+ TA +K DL ++FV R E Y NSR P + G+ ++D RRD TIN++ +++
Sbjct: 75 VYKNFGTAMIKAKDLDLEFVGARKESYQSNSRKPYVESGSLQDDQNRRDFTINAMALSLS 134
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ L G++DLK+ I TPL P T+ DDPLR++RAIRF + +F + EE A
Sbjct: 135 QADFGALIDPFDGVSDLKNKIIRTPLDPDITYSDDPLRMMRAIRFACQLNFKIQEESLLA 194
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEV- 331
++ + + IS ER+ E+ +++ +P GL L + L + PE+
Sbjct: 195 ITRNKERIKI---ISNERIVDELHKILACEKPS------VGLKLLYTT-GLLHHILPELI 244
Query: 332 -LEGCE 336
L+G E
Sbjct: 245 QLQGVE 250
>gi|160882737|ref|ZP_02063740.1| hypothetical protein BACOVA_00695 [Bacteroides ovatus ATCC 8483]
gi|299148031|ref|ZP_07041094.1| polyA polymerase family protein [Bacteroides sp. 3_1_23]
gi|336416793|ref|ZP_08597125.1| hypothetical protein HMPREF1017_04233 [Bacteroides ovatus
3_8_47FAA]
gi|156111907|gb|EDO13652.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Bacteroides ovatus ATCC 8483]
gi|298514214|gb|EFI38100.1| polyA polymerase family protein [Bacteroides sp. 3_1_23]
gi|335937231|gb|EGM99135.1| hypothetical protein HMPREF1017_04233 [Bacteroides ovatus
3_8_47FAA]
Length = 477
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T +E V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGQIAETADTLGMECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKQLGRGAHV-----SVFKNFGTAQVKYRGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N + +L G+ D+K I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKARFGELVDPFGGLEDMKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + F +D++ ++ ++ + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLGFYIDDDTFESLCRNKERIEI---ISRERIADELNKIILS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PIPSKGFIDLERSGLLPLIF 243
>gi|423226419|ref|ZP_17212885.1| hypothetical protein HMPREF1062_05071 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629847|gb|EIY23853.1| hypothetical protein HMPREF1062_05071 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 476
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 122/260 (46%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
+ELT E K IF + T LE V GG+VRD L + DID+ +
Sbjct: 2 VELTTEELKQHFSDDIFKRISETADELGLECY--VVGGYVRDIFLQRPSKDIDVVVVGS- 58
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G E A + + L A K+ TA +K ++FV R E Y
Sbjct: 59 GIEMAEALGKRLGRGAHVAVF------------KNFGTAQVKYRGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N S +L GI DLK I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNQSRFGELVDPFGGIEDLKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D+ ++ + + ++ IS+ER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDATFESLCRNCERISI---ISKERIAEELNKILLS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PVPSKGFIDLDRSGLLPLIF 243
>gi|423215291|ref|ZP_17201818.1| hypothetical protein HMPREF1074_03350 [Bacteroides xylanisolvens
CL03T12C04]
gi|392691859|gb|EIY85099.1| hypothetical protein HMPREF1074_03350 [Bacteroides xylanisolvens
CL03T12C04]
Length = 477
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T +E V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGQIAETADALGMECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQVKYRGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N + +L G+ D+K I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKARFGELVDPFGGMEDMKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + F +D++ ++ ++ + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLGFYIDDDTFESLCRNKERIEI---ISRERIADELNKIILS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PIPSKGFIDLERSGLLPLIF 243
>gi|262407064|ref|ZP_06083613.1| tRNA adenylyltransferase [Bacteroides sp. 2_1_22]
gi|336403213|ref|ZP_08583931.1| hypothetical protein HMPREF0127_01244 [Bacteroides sp. 1_1_30]
gi|345512194|ref|ZP_08791729.1| tRNA nucleotidyltransferase [Bacteroides sp. D1]
gi|229445836|gb|EEO51627.1| tRNA nucleotidyltransferase [Bacteroides sp. D1]
gi|262355767|gb|EEZ04858.1| tRNA adenylyltransferase [Bacteroides sp. 2_1_22]
gi|335946708|gb|EGN08507.1| hypothetical protein HMPREF0127_01244 [Bacteroides sp. 1_1_30]
Length = 477
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 127/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T +E V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGQIAETADALGMECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKRLGRGAHV-----SVFKNFGTAQVKYRGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N + +L G+ D+K I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKARFGELVDPFGGMEDMKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + F +D++ ++ ++ + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLGFYIDDDTFESLCRNKERIEI---ISRERIADELNKIILS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PIPSKGFIDLERSGLLPLIF 243
>gi|163785978|ref|ZP_02180426.1| putative polyA polymerase [Flavobacteriales bacterium ALC-1]
gi|159877838|gb|EDP71894.1| putative polyA polymerase [Flavobacteriales bacterium ALC-1]
Length = 474
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 111/212 (52%), Gaps = 23/212 (10%)
Query: 98 VAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LL + DIDI G E A +VA L P+NP
Sbjct: 28 VIGGFVRDYLLDRGSAKDIDIVAIGS-GIELAKQVAINL--------------PNNPKVQ 72
Query: 157 --KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
K TA ++ D+ I+FV R E YSE+SR P + GT ++D RRD TIN+L +N
Sbjct: 73 IFKTYGTAMLRHDDIEIEFVGARKESYSEDSRNPVVENGTLQDDQNRRDFTINALALCLN 132
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ +L GI DL G I TPL P T+ DDPLR++RAIRF + +F ++ KA
Sbjct: 133 KENFGELLDPFNGINDLDKGIIRTPLNPDITYSDDPLRMMRAIRFATQLNFNIESASLKA 192
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
++ + + I++ER+ E++ ++ P
Sbjct: 193 ITDNKDRIQI---ITKERIVVELNKILESKTP 221
>gi|224536185|ref|ZP_03676724.1| hypothetical protein BACCELL_01051 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522198|gb|EEF91303.1| hypothetical protein BACCELL_01051 [Bacteroides cellulosilyticus
DSM 14838]
Length = 476
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 122/260 (46%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
+ELT E K IF + T LE V GG+VRD L + DID+ +
Sbjct: 2 VELTTEELKQHFSDDIFKRISETADELGLECY--VVGGYVRDIFLQRPSKDIDVVVVGS- 58
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G E A + + L A K+ TA +K ++FV R E Y
Sbjct: 59 GIEMAEALGKCLGRGAHVAVF------------KNFGTAQVKYRGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N S +L GI DLK I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNQSRFGELVDPFGGIEDLKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D+ ++ + + ++ IS+ER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDATFESLCRNCERISI---ISKERIAEELNKILLS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PVPSKGFIDLDRSGLLPLIF 243
>gi|390445607|ref|ZP_10233341.1| polynucleotide adenylyltransferase [Nitritalea halalkaliphila LW7]
gi|389661470|gb|EIM73080.1| polynucleotide adenylyltransferase [Nitritalea halalkaliphila LW7]
Length = 477
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 107/210 (50%), Gaps = 19/210 (9%)
Query: 98 VAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LLG+ DID G E AT VA+ A S F
Sbjct: 29 VVGGFVRDYLLGRGLKKDIDFVCVGS-GIELATAVAKSYDA--HVPLSVF---------- 75
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K+ TA +KL D I+FV R E Y +SR P + GT EED RRD TIN+L +N
Sbjct: 76 KNFGTAMVKLADYDIEFVGARKESYHRDSRKPIVEDGTLEEDQERRDFTINALAICVNGD 135
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L G+ DLK I TP P TF DDPLR++RAIRF A+ F ++ E +
Sbjct: 136 RFGELIDPFEGLKDLKRKIIRTPAAPDTTFSDDPLRMMRAIRFAAQLQFDIEPETFEGIC 195
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ A + IS+ER+ E++ ++ QP
Sbjct: 196 RN---AGRLSIISQERIIDELNKIILCPQP 222
>gi|410028204|ref|ZP_11278040.1| tRNA nucleotidyltransferase/poly(A) polymerase [Marinilabilia sp.
AK2]
Length = 472
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 126/258 (48%), Gaps = 29/258 (11%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT 138
IF + LET V GG+VRD +L + C DID G A KVAE +
Sbjct: 12 IFRRVGQIADELGLETF--VVGGYVRDLILNRPCKDIDFVCVGS-GIALAQKVAE---SY 65
Query: 139 GETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
E P S F K+ TA ++L D ++FV R E Y +SR P + GT +E
Sbjct: 66 EEHVPLSVF----------KNFGTANIRLEDWEVEFVGARRESYRHDSRKPIVEDGTLQE 115
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
D RRD TIN++ ++N + +L G+ D+K I TP P TF DDPLR++RAI
Sbjct: 116 DLERRDFTINAMAVSVNAHNFGELIDPFDGMGDIKRKTIKTPTDPIITFSDDPLRMMRAI 175
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLT 315
RF A+ F ++ + A D + + +S ER+ E+ ++ +P G
Sbjct: 176 RFAAQLHFDIEPDTFLAIVHDANRLQI---VSAERIMDELTKIIMTPKPS------YGFK 226
Query: 316 LFWIVFKLPLQVEPEVLE 333
L + V KL Q PE++E
Sbjct: 227 LLF-VSKLLHQFFPEMVE 243
>gi|288929668|ref|ZP_06423512.1| polyA polymerase family protein [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329173|gb|EFC67760.1| polyA polymerase family protein [Prevotella sp. oral taxon 317 str.
F0108]
Length = 490
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ + +GS A S + S F +
Sbjct: 47 VVGGYVRDLFLERASNDIDVVV---VGSGIQVADALRKSLGKKAHISVF----------R 93
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA +K I+FV R E YS +SR P + GT E+D RRD TIN++ +N +
Sbjct: 94 NFGTAQVKFRGYEIEFVGARKESYSHDSRKPIVENGTLEDDQNRRDFTINAMAVCLNAEN 153
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
L G+ DL+ G I TPL P TF DDPLR+LR +RF + F +++E A
Sbjct: 154 FGQLIDPFDGLYDLEDGIIRTPLDPDITFSDDPLRMLRCVRFATQLRFFIEDETFDALTR 213
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HICGL 314
+ + + +S ER+ E++ ++ QP + H CGL
Sbjct: 214 NAERIKI---VSGERIADELNKIMMTQQPSRGFVELHRCGL 251
>gi|351722177|ref|NP_001236979.1| uncharacterized protein LOC100527248 [Glycine max]
gi|255631872|gb|ACU16303.1| unknown [Glycine max]
Length = 153
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 76/110 (69%), Gaps = 6/110 (5%)
Query: 409 VMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDASKLRVLTGFLLREIKKFWR 468
V+N+ + KFLSLIP L S+ED +V D W +LVDVP +S++RVLTGFLLRE+K +W
Sbjct: 2 VLNLRQASHKFLSLIPCLASSEDAQVVDHDWLGDLVDVPVSSRVRVLTGFLLRELKDYWH 61
Query: 469 VALLISTLLYPTHVDHTEDMLNQHFQLDSKRDLFVAAEKAITKLGMVSIF 518
VALLIST+L+P D+ ++ QL +RDLF E +I KLG+ ++
Sbjct: 62 VALLISTILHPI------DIKDEPSQLGKRRDLFNTVENSIIKLGLEKVW 105
>gi|402495433|ref|ZP_10842160.1| tRNA nucleotidyltransferase [Aquimarina agarilytica ZC1]
Length = 474
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 121/235 (51%), Gaps = 29/235 (12%)
Query: 79 IFSCLLNTLRHFN----LETVLRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAE 133
++ + N +R N LE+ V GG+VRD LL + + DIDI G E A KV+E
Sbjct: 10 LYHPIFNIIRKANAILGLESY--VIGGFVRDFLLKRGNAKDIDIVAVGS-GIELALKVSE 66
Query: 134 YLSATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
L P+ P K TA ++ D+ I+FV R E Y+E+SR P +
Sbjct: 67 LL--------------PNKPKVQVFKTYGTAMLRYQDIEIEFVGARKESYNEDSRNPIVE 112
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPL 249
GT ++D RRD TIN+L ++N + DL GI DL I TPL P T+ DDPL
Sbjct: 113 NGTLQDDQNRRDFTINALALSLNEETYGDLLDPFGGIKDLDKKIIRTPLAPGITYSDDPL 172
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
R++RAIRF + +F +++ A + + I++ER+ E++ ++S P
Sbjct: 173 RMMRAIRFATQLNFKIEKASLDAIKEHNERIKI---ITKERIVVELNKILSSPVP 224
>gi|260909396|ref|ZP_05916104.1| tRNA nucleotidyltransferase [Prevotella sp. oral taxon 472 str.
F0295]
gi|260636488|gb|EEX54470.1| tRNA nucleotidyltransferase [Prevotella sp. oral taxon 472 str.
F0295]
Length = 490
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ + +GS A S + S F +
Sbjct: 47 VVGGYVRDLFLERTSNDIDVVV---VGSGIQVADALRKSLGKKAHISVF----------R 93
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA +K I+FV R E YS +SR P + GT E+D RRD TIN++ +N +
Sbjct: 94 NFGTAQVKFRGYEIEFVGARKESYSHDSRKPIVENGTLEDDQNRRDFTINAMAACLNAEN 153
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
L G+ DL+ G I TPL P TF DDPLR+LR +RF + F +++E A
Sbjct: 154 FGKLIDPFDGVYDLEDGIIRTPLDPDITFSDDPLRMLRCVRFATQLRFFIEDETFDALTR 213
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HICGL 314
+ + + IS ER+ E++ ++ QP + H CGL
Sbjct: 214 NAERIKI---ISGERIADELNKIMMTPQPSRGFVELHRCGL 251
>gi|146302633|ref|YP_001197224.1| polynucleotide adenylyltransferase [Flavobacterium johnsoniae
UW101]
gi|146157051|gb|ABQ07905.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Flavobacterium johnsoniae UW101]
Length = 495
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 123/237 (51%), Gaps = 25/237 (10%)
Query: 73 TDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKV 131
T + KIF + + +++ V GG+VRD LL + DID+ G E A KV
Sbjct: 27 TALQNKIFDVISKASQELKVDSY--VIGGFVRDLLLNRGSKKDIDVVAVGS-GIELALKV 83
Query: 132 AEYLSATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
++ L P+ P K TA ++ D I+FV R E Y+ +SR P
Sbjct: 84 SDLL--------------PNKPKVQVFKTYGTAMLRFEDTDIEFVGARKESYTRDSRNPI 129
Query: 190 MRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDD 247
+ GT ++D RRD TIN+L ++N+++ DL G+ DL++ I TPL P T+ DD
Sbjct: 130 VENGTLQDDQNRRDFTINALALSLNSTNFGDLLDPFDGLTDLENKTIKTPLDPDITYSDD 189
Query: 248 PLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
PLR+LRAIRF + +F ++E A + + + IS ER+ E++ ++S +P
Sbjct: 190 PLRMLRAIRFATQLNFEIEENSLNAITKNADRIKI---ISGERIVDELNKILSTPKP 243
>gi|404406405|ref|ZP_10997989.1| tRNA nucleotidyltransferase/poly(A) polymerase [Alistipes sp.
JC136]
Length = 463
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 36/220 (16%)
Query: 98 VAGGWVRDKLLGKDCYDID-------IALDNMMGSEFATKVAEYLSATGETAPSGFGVIP 150
V GG+VRD L + DID IAL +G E KV+ +
Sbjct: 22 VVGGYVRDHYLRRPSTDIDVVVVGSGIALAEALGRELKAKVSVF---------------- 65
Query: 151 SNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLF 210
K TA ++ + ++FV R E Y+ +SR P + GT E+D RRD TIN++
Sbjct: 66 ------KTFGTAMVRAGGVEVEFVGARRESYTRDSRKPEVEPGTLEDDQRRRDFTINAMA 119
Query: 211 YNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
+++N ++ +L G++DL+ I TP P TF DDPLR++RA+RF ++ F ++EE
Sbjct: 120 WSLNEATFGELVDPFDGMSDLEECIIRTPCDPDITFSDDPLRMMRAVRFASQLGFTIEEE 179
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+A + + + +SRER+ TE++ +V PV +M
Sbjct: 180 TFEAIRRNAERIRI---VSRERIATELNKIVL--SPVPSM 214
>gi|294674522|ref|YP_003575138.1| polyA polymerase family protein [Prevotella ruminicola 23]
gi|4204222|dbj|BAA74513.1| polyA polymerase [Prevotella ruminicola]
gi|294474228|gb|ADE83617.1| polyA polymerase family protein [Prevotella ruminicola 23]
Length = 479
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 118/229 (51%), Gaps = 32/229 (13%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS-ATGETAP-SGFGVIPSNPDQ 155
V GG+VRD L + DID+ + +GS KVAE L G+ A S F
Sbjct: 34 VVGGYVRDIFLERPSNDIDVVV---VGS--GIKVAEELKRIVGKKAHLSVF--------- 79
Query: 156 SKHLETATMKLY----DLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFY 211
K+ TA +K + + ++FV R E YS +SR P + GT E+D RRD TIN++
Sbjct: 80 -KNFGTAQVKFWQKGTEYEVEFVGARKESYSHDSRKPIVENGTLEDDQNRRDFTINAMAI 138
Query: 212 NINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEEL 269
+N +L G+ADL+ G I TPL P TF DDPLR++R IRF + +F ++EE
Sbjct: 139 CLNKERFGELVDPFNGLADLEDGIIATPLEPGITFSDDPLRMMRCIRFATQLNFQIEEET 198
Query: 270 KKA--AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
A +D +K +S ER+ E++ ++ P + + CGL
Sbjct: 199 FVALERMADRIKI-----VSGERIKDELNKIILSKTPSRGFVDLQRCGL 242
>gi|428180220|gb|EKX49088.1| hypothetical protein GUITHDRAFT_93484, partial [Guillardia theta
CCMP2712]
Length = 252
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 40/269 (14%)
Query: 226 IADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAK 285
+ DL I TPLPP T DDPLR LRAIRF RFDF LD+EL+ + EV+ AL++K
Sbjct: 1 MKDLNDRIIRTPLPPLQTMTDDPLRALRAIRFACRFDFQLDKELEDTLSMGEVRQALSSK 60
Query: 286 ISRERVGTEIDLMVSGNQPVKAMT--HICGLTLFWIVFKLPLQVEPEVLEGC-------- 335
+S+ERV TE++ M++G P +++ H CG +F ++F +P ++ + L+
Sbjct: 61 VSKERVYTELNGMLTGPNPRRSLELLHSCG--MFGVIFSVPETIKEDQLDPSWTSKAMAV 118
Query: 336 --------EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTTYKDNKGKK 387
+ L QL+ + + + RRL AA P R+ + + K K
Sbjct: 119 VRKISSLDHQTLSQMLRKEDVQQQLVALHSLSPEWRRLVFLAAALTPLRSLSVEGGK-KP 177
Query: 388 IPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSL-VSAEDVKVNDGQWSKELVDV 446
+P++ + R +LK D + V + E+ + SL EDV++
Sbjct: 178 LPLIEHVIRVALKGTIKDVQEVSVLLDCSEELRQVAASLPAHREDVEL------------ 225
Query: 447 PDASKLRVLTGFLLREIKKFWRVALLIST 475
KLR LR + WR+AL+++
Sbjct: 226 ----KLR--AAKCLRRGGEQWRLALVLAA 248
>gi|385810281|ref|YP_005846677.1| tRNA nucleotidyltransferase [Ignavibacterium album JCM 16511]
gi|383802329|gb|AFH49409.1| tRNA nucleotidyltransferase [Ignavibacterium album JCM 16511]
Length = 471
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 119/228 (52%), Gaps = 23/228 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGS--EFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
+ GG VRD +L ++ +D+D + +G EFA KVA+ + T FG
Sbjct: 29 MVGGVVRDLILKRERHDLDFLV---IGDSLEFAEKVAKRVGVKKVTKYKNFG-------- 77
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
TA K + I+FV R E Y+ SR P + GT E+D RRD TIN++ ++N
Sbjct: 78 -----TAHFKFENYDIEFVGARKESYNRYSRKPIVEDGTFEDDIKRRDFTINAMAVSLNK 132
Query: 216 SSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
++ +L G DL++ I TPL P TF DDPLR++RA RF A+ +F +D+ +
Sbjct: 133 NNFGELIDLFNGYNDLQNKLIRTPLDPFQTFDDDPLRIMRAFRFAAQLEFTVDDAI--MN 190
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
AS E++ L +S+ER+ E ++S +P + + + I+F
Sbjct: 191 ASREMRERLRI-VSQERITDEFLKILSSPKPSIGLKLLYDSGVMEIIF 237
>gi|383810825|ref|ZP_09966311.1| HDIG domain protein [Prevotella sp. oral taxon 306 str. F0472]
gi|383356539|gb|EID34037.1| HDIG domain protein [Prevotella sp. oral taxon 306 str. F0472]
Length = 474
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 127/259 (49%), Gaps = 26/259 (10%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT 138
IF + N LE V GG+VRD L + DID+ + +GS +VA L A
Sbjct: 17 IFHHISNATDKLGLECY--VVGGYVRDLFLERPSNDIDVVV---VGS--GIQVASELKAV 69
Query: 139 -GETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
G+ A S F ++ TA +K ++FV R E YS +SR P + GT E
Sbjct: 70 LGKKAHLSVF----------RNFGTAQVKYKHTEVEFVGARRESYSHDSRKPVVEDGTLE 119
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN+L +N + +L G+ DL G I TPL P TF DDPLR++R
Sbjct: 120 DDQNRRDFTINALAVCLNKARFGELVDPFGGVDDLWDGIIRTPLDPDVTFSDDPLRMMRC 179
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGL 314
+RF + +F +D+E +A E A IS ER+ E++ ++ P K +
Sbjct: 180 VRFATQLNFFIDDETFEAL---ERNAERIKIISGERIEEELNKIMMTPTPSKGFIDLYRC 236
Query: 315 TLFWIVFKLPLQVEPEVLE 333
L I+ LP V +V+E
Sbjct: 237 GLLQII--LPELVALDVVE 253
>gi|330996014|ref|ZP_08319908.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Paraprevotella xylaniphila YIT 11841]
gi|329574011|gb|EGG55589.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Paraprevotella xylaniphila YIT 11841]
Length = 493
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 120/246 (48%), Gaps = 33/246 (13%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGE-TAPSGFGVIPSNPDQS 156
V GG+VRD L + DID+ G A +A L + S FG
Sbjct: 34 VVGGYVRDLFLERPSQDIDVVTVGS-GIALAKALAGRLGRGARLSVFSNFG--------- 83
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA +K + ++FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 84 ----TAQVKFRGMEVEFVGARKESYSHDSRKPVVEDGTLEDDQNRRDFTINALAVCLNRE 139
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L G+ D++ I TPL P TF DDPLR++R +RF + +F +DEE +A
Sbjct: 140 RFGELVDPFDGVWDMEDRLIRTPLDPDITFSDDPLRMMRCVRFATQLNFYIDEETFEALE 199
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGLTLFWIVFKLPLQVEPEV- 331
+ + + +SRER+ E++ ++ P K + CGL LPL + PE+
Sbjct: 200 RNRERIKI---VSRERIADELNKIMMTPTPSKGFVELARCGL--------LPL-IFPELA 247
Query: 332 -LEGCE 336
+EG E
Sbjct: 248 AMEGVE 253
>gi|406884742|gb|EKD32091.1| hypothetical protein ACD_77C00178G0007 [uncultured bacterium]
Length = 469
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 110/209 (52%), Gaps = 20/209 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L ++ D+DI ++ G + A K+A+ L S FG
Sbjct: 25 VIGGFVRDCFLERESKDVDIVVEGS-GIDLAEKIAKRLKVKVSVFKS-FG---------- 72
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
TA +K D I+FV R E Y +SR P + GT EED RRD TIN+L +++
Sbjct: 73 ---TAMLKSGDTEIEFVGARKESYRSDSRKPIVEDGTIEEDQLRRDFTINALAFSLQKED 129
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L+ G+ DL++G I TPL P T+ DDPLR++RAIRF ++ F + E +
Sbjct: 130 FGNLSDPFNGVKDLQNGLIRTPLEPDTTYSDDPLRMIRAIRFASQLSFTIVPESISSIKR 189
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ + + +S ER+ E++ ++ +P
Sbjct: 190 NRERLKI---LSTERISDELNKILLTPKP 215
>gi|255691214|ref|ZP_05414889.1| polyA polymerase family protein [Bacteroides finegoldii DSM 17565]
gi|423302556|ref|ZP_17280578.1| hypothetical protein HMPREF1057_03719 [Bacteroides finegoldii
CL09T03C10]
gi|260623126|gb|EEX45997.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Bacteroides finegoldii DSM 17565]
gi|408470432|gb|EKJ88966.1| hypothetical protein HMPREF1057_03719 [Bacteroides finegoldii
CL09T03C10]
Length = 478
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 125/260 (48%), Gaps = 26/260 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE V GG+VRD L + DID+ + +
Sbjct: 2 IELTQEELKQHFSEPIFGKIAETADTLGLECY--VVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G+ G V K+ TA +K ++FV R E Y
Sbjct: 57 GSGIA--MAE---ALGKHLGRGAHV-----SVFKNFGTAQVKYKGTEVEFVGARRESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N +L G+ D+K I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKGRFGELVDPFGGLEDMKEKTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + F +D++ + ++ + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLGFYIDDDTFDSLCRNKDRIEI---ISRERIADELNKIILS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PIPSKGFIDLDRSGLLPLIF 243
>gi|390947202|ref|YP_006410962.1| tRNA nucleotidyltransferase/poly(A) polymerase [Alistipes
finegoldii DSM 17242]
gi|390423771|gb|AFL78277.1| tRNA nucleotidyltransferase/poly(A) polymerase [Alistipes
finegoldii DSM 17242]
Length = 469
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 111/220 (50%), Gaps = 36/220 (16%)
Query: 98 VAGGWVRDKLLGKDCYDID-------IALDNMMGSEFATKVAEYLSATGETAPSGFGVIP 150
V GG+VRD L + DID IAL +GSE KV+ +
Sbjct: 24 VVGGYVRDHFLRRPSTDIDVVVVGSGIALAEALGSELHAKVSVF---------------- 67
Query: 151 SNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLF 210
K TA ++ + ++FV R E Y+++SR P + GT E+D RRD TIN++
Sbjct: 68 ------KTFGTAMLRHKGVEVEFVGARRESYTQDSRKPQVEAGTLEDDQRRRDFTINAMA 121
Query: 211 YNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
+++N S +L G+ DL+ I TP P TF DDPLR++RA+RF ++ F ++ E
Sbjct: 122 WSLNAGSFGELVDPFDGMDDLEECVIRTPCDPDVTFSDDPLRMMRAVRFASQLGFTIEGE 181
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A + + + +SRER+ E++ +V PV +M
Sbjct: 182 TFDAIRRNAHRIRI---VSRERIAAELNKIVL--SPVPSM 216
>gi|282877716|ref|ZP_06286531.1| HD domain protein [Prevotella buccalis ATCC 35310]
gi|281300288|gb|EFA92642.1| HD domain protein [Prevotella buccalis ATCC 35310]
Length = 478
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 119/230 (51%), Gaps = 24/230 (10%)
Query: 91 NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT-GETAP-SGFGV 148
+L+ V GG+VRD L + DID+ + +GS KVAE L G+ A S F
Sbjct: 27 DLQLECYVVGGYVRDLFLERPSNDIDVVV---VGS--GIKVAEALKQRLGKQAHLSVF-- 79
Query: 149 IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINS 208
++ TA +K ++FV R E Y+ +SR P + GT E+D RRD TIN+
Sbjct: 80 --------RNFGTAQVKYRGQEVEFVGARKESYNHDSRKPVVEDGTLEDDQNRRDFTINA 131
Query: 209 LFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
+ +N + +L G+ DL+ G I TPL P TF DDPLR++R +RF + F ++
Sbjct: 132 MAVCLNEARFGELVDPFDGLLDLEDGIIRTPLDPDITFSDDPLRMMRCVRFATQLKFFIE 191
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HICGL 314
+E +A + + + +S ER+ E++ ++ + P + H CGL
Sbjct: 192 DETFEALQRNRERIKI---VSGERIADELNKIMMTDHPSRGFVELHRCGL 238
>gi|384098441|ref|ZP_09999557.1| tRNA nucleotidyltransferase [Imtechella halotolerans K1]
gi|383835698|gb|EID75121.1| tRNA nucleotidyltransferase [Imtechella halotolerans K1]
Length = 475
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 122/246 (49%), Gaps = 27/246 (10%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEY 134
+ IFS + R N+E+ V GG+VRD +L + DID+ G E A VA
Sbjct: 8 QNPIFSVISEAARDLNVESY--VIGGFVRDFILERGTPKDIDVVAVGS-GIELAQSVAAR 64
Query: 135 LSATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRF 192
L P P S K+ TA +K DL ++FV R E Y E+SR P +
Sbjct: 65 L--------------PGKPKVSVFKNYGTAMLKTDDLEVEFVGARRESYREDSRKPLVED 110
Query: 193 GTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLR 250
GT E+D RRD TIN+L +++ S DL G DLK I TPL T+ DDPLR
Sbjct: 111 GTLEDDQNRRDFTINALALSLSKESFGDLLDPFDGFGDLKRKLIRTPLDADITYSDDPLR 170
Query: 251 VLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA--M 308
++RAIRF + F +++ +A ++ + + IS ER+ E++ ++ +P +
Sbjct: 171 MMRAIRFATQLSFTIEDASLEAIERNKRRIGI---ISGERIVDELNKILMTPKPSVGFQL 227
Query: 309 THICGL 314
H GL
Sbjct: 228 LHQTGL 233
>gi|365875203|ref|ZP_09414733.1| tRNA nucleotidyltransferase [Elizabethkingia anophelis Ag1]
gi|442589151|ref|ZP_21007959.1| tRNA nucleotidyltransferase [Elizabethkingia anophelis R26]
gi|365757315|gb|EHM99224.1| tRNA nucleotidyltransferase [Elizabethkingia anophelis Ag1]
gi|442560761|gb|ELR77988.1| tRNA nucleotidyltransferase [Elizabethkingia anophelis R26]
Length = 474
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 127/244 (52%), Gaps = 28/244 (11%)
Query: 98 VAGGWVRDKLLG-KDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
+ GG+VRD L+ K+ DID ++ G + A VAE ++ + S F
Sbjct: 30 IVGGYVRDLLMQRKEPTDIDFVTESS-GIKLAETVAENINPKPKV--SVF---------- 76
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K TA +K +L ++FV R E Y+ENSR P + GT E+D RRD TIN++ ++
Sbjct: 77 KTYGTAMIKYQNLDLEFVGARKESYTENSRNPEVEIGTLEDDQKRRDFTINAMAISLGKE 136
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ +L G+ DL + TPL P T+ DDPLR++RAIRF + +F ++E+ KA
Sbjct: 137 NFGELIDPFNGMQDLSDKILRTPLEPVQTYSDDPLRMMRAIRFASTLNFKIEEKSLKAIK 196
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEV--L 332
+ + + +S ER+ TE + ++ +P ++ + LF I+ PE+ L
Sbjct: 197 QEAKRIEI---VSMERIMTEFNKIMLSEKPSTGLSILEKTGLFDIIL-------PEITAL 246
Query: 333 EGCE 336
+G E
Sbjct: 247 KGIE 250
>gi|332877661|ref|ZP_08445404.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684410|gb|EGJ57264.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 473
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 120/231 (51%), Gaps = 25/231 (10%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSA 137
IFS + LE+ V GG+VRD LL K DIDI + G A KVAE L
Sbjct: 11 IFSLISTISSQMALESY--VIGGFVRDFLLQKKLPKDIDI-VSIGSGISLAEKVAEQL-- 65
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P++P S K+ TA +K L I+FV R E Y NSR P + GT
Sbjct: 66 ------------PNSPKVSVFKNFGTAMIKADGLDIEFVGARRESYESNSRKPYVESGTL 113
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
++D RRD TIN++ +++N + +L G+ DL+ I TPL P T+ DDPLR++R
Sbjct: 114 QDDQNRRDFTINAMAFSLNKDTFGELIDPFDGLGDLERKLIRTPLDPDITYSDDPLRMMR 173
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
AIRF + +F +++ A + ++ + + IS ER+ E+ ++ +P
Sbjct: 174 AIRFATQLNFQIEDTSLNAISKNKERLQI---ISNERIVDELHKILLAAKP 221
>gi|255014465|ref|ZP_05286591.1| tRNA nucleotidyltransferase [Bacteroides sp. 2_1_7]
gi|410103138|ref|ZP_11298062.1| hypothetical protein HMPREF0999_01834 [Parabacteroides sp. D25]
gi|409237596|gb|EKN30394.1| hypothetical protein HMPREF0999_01834 [Parabacteroides sp. D25]
Length = 476
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 112/221 (50%), Gaps = 20/221 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ G E A +VA+ + G G S K
Sbjct: 33 VIGGYVRDIFLNRPSKDIDVVAVGS-GIELAKRVAKKI---------GRGAYLS---VFK 79
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA +K DL ++FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 80 NFGTAQVKAGDLELEFVGARKESYSHDSRKPVVEDGTLEDDQNRRDFTINALALCLNKER 139
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ D+ I TPL P TF DDPLR++RAIRF + F +D + A
Sbjct: 140 YGELVDPFGGLEDMDELTIRTPLDPDVTFSDDPLRMMRAIRFATQLGFFIDPDTFDAIIR 199
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
+ + ++ IS+ER+ E++ +V +P + CGL
Sbjct: 200 NRERISI---ISKERIVDELNKIVLSPKPSIGFDLLDKCGL 237
>gi|258647149|ref|ZP_05734618.1| polyA polymerase family protein [Prevotella tannerae ATCC 51259]
gi|260853114|gb|EEX72983.1| polyA polymerase family protein [Prevotella tannerae ATCC 51259]
Length = 479
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 123/239 (51%), Gaps = 21/239 (8%)
Query: 68 DKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEF 127
D I+L D E +F L T LE V GG+VRD L + DIDI + +GS
Sbjct: 8 DIIQLLDREP-LFRELAQTADRLQLECY--VVGGYVRDLFLERPTNDIDIVV---VGSGI 61
Query: 128 ATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRI 187
A +AE L+ A + V K+ TA +K + I+FV R E YS +SR
Sbjct: 62 A--MAEALTKRLGRA-AHLSVF-------KNFGTAQVKYHHQEIEFVGARRESYSHDSRK 111
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFL 245
P + GT E+D RRD TIN+L +NT+ +L G+ DL+ G + TP P TF
Sbjct: 112 PIVEDGTLEDDQMRRDFTINALAVCLNTARYGELVDPFDGLWDLEDGLLRTPTDPDITFS 171
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
DDPLR++R +RF + +F +D+E A+ E A + IS ER+ E++ ++ P
Sbjct: 172 DDPLRMMRCVRFATQLNFRIDDE---TFAALERNAERLSIISGERIIEELNKIMRAPLP 227
>gi|319903055|ref|YP_004162783.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Bacteroides helcogenes P 36-108]
gi|319418086|gb|ADV45197.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Bacteroides helcogenes P 36-108]
Length = 482
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 125/255 (49%), Gaps = 28/255 (10%)
Query: 70 IELTDTETK------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E K IF + T LE GG+VRD L + DID+ + +
Sbjct: 2 IELTAEELKQFFSDDIFKSISATADELGLECY--AVGGYVRDIFLQRPSKDIDVVV---V 56
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
GS A +AE A G G V K+ TA +K + ++FV R E Y+
Sbjct: 57 GSGIA--MAE---ALGRRLGRGAHV-----SVFKNFGTAQLKYRGVEVEFVGARKESYTH 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N + +L G+ D+K I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNRARYGELVDPFGGMQDMKERTIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + +F +D+ + + + ++ IS+ER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLNFYIDDGTFDSLCRNRERISI---ISKERIADELNKIILS 223
Query: 302 NQPVKAMTHI--CGL 314
P + + CGL
Sbjct: 224 PIPSRGFIDLDRCGL 238
>gi|124003434|ref|ZP_01688283.1| tRNA nucleotidyltransferase [Microscilla marina ATCC 23134]
gi|123991003|gb|EAY30455.1| tRNA nucleotidyltransferase [Microscilla marina ATCC 23134]
Length = 478
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 120/245 (48%), Gaps = 34/245 (13%)
Query: 92 LETVLRVA----------GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET 141
LETV +VA GG+VRD +L + DIDI G E A VAE L
Sbjct: 13 LETVAKVAQQTGLETYVVGGFVRDLILKRPSKDIDIVCVGS-GIELAKAVAEEL------ 65
Query: 142 APSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDA 199
P P + K+ TA +K D ++FV R E Y NSR P + GT E+D
Sbjct: 66 --------PDKPQVNYFKNFGTAQIKAQDWELEFVGARKESYQRNSRKPIVENGTLEDDQ 117
Query: 200 YRRDLTINSLFYNI---NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIR 256
RRD TIN+L ++ N V D G GI L+ I TPL P TF DDPLR++RA+R
Sbjct: 118 NRRDFTINALAISLQANNYGEVIDPFG-GIKHLEQRVIKTPLDPDITFSDDPLRMMRAMR 176
Query: 257 FGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTL 316
F + F ++ ++ ++ + + +S+ER+ E++ +V+ + P + L
Sbjct: 177 FATQLKFDIEPNTFESIQKNKERIKI---VSQERITVELNKIVAASVPSYGFKLLFYAEL 233
Query: 317 FWIVF 321
++F
Sbjct: 234 LHLIF 238
>gi|443242313|ref|YP_007375538.1| polyA polymerase [Nonlabens dokdonensis DSW-6]
gi|442799712|gb|AGC75517.1| polyA polymerase [Nonlabens dokdonensis DSW-6]
Length = 475
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 92 LETVLRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIP 150
LE V GG+VRD L + DID+ G A KV E L + T S F
Sbjct: 26 LELPAYVIGGYVRDFFLKRGQKKDIDVVAVGS-GISLARKVEELLPHS--TKVSVF---- 78
Query: 151 SNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLF 210
K+ TA +K DL ++FV R E Y SR P + GT E+D RRD TIN++
Sbjct: 79 ------KNFGTAMVKTDDLELEFVGARKESYDRGSRKPVVEDGTLEDDQNRRDFTINAMA 132
Query: 211 YNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
+++N +S L G+ DL++ I TPL P TF DDPLR+LRAIRF A+ +F ++ E
Sbjct: 133 FSLNKNSFGALLDPFNGMEDLRNKIIRTPLDPDVTFSDDPLRMLRAIRFAAQLNFRIESE 192
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ S + A IS ER+ TE+ ++ ++P
Sbjct: 193 ---SFQSIKRNAHRLKIISNERIVTELHKIMLCDEP 225
>gi|327405856|ref|YP_004346694.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Fluviicola taffensis DSM 16823]
gi|327321364|gb|AEA45856.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Fluviicola taffensis DSM 16823]
Length = 474
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 19/212 (8%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LL + DIDI + G E A + L FG
Sbjct: 31 VIGGFVRDLLLERPSKDIDIVVVGN-GMELAQAAGDKLRVKRVNLFKNFG---------- 79
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
TA DL ++FV R E Y +SR P + GT +D RRD TIN+L ++ S
Sbjct: 80 ---TAQFNYKDLDVEFVGARKESYQRDSRKPIVEDGTLSDDQKRRDFTINALALDLRAES 136
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ADL+ G + TPL P T+ DDPLR++RAIRF + DF ++ K+
Sbjct: 137 FGNLIDPFNGLADLEKGILRTPLDPNTTYSDDPLRMMRAIRFATQLDFQIEISSLKSILE 196
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
+ + + IS+ER+ E++ ++ +P +
Sbjct: 197 NSSRLEI---ISQERIVDELNKIILAEKPSRG 225
>gi|345884619|ref|ZP_08836023.1| hypothetical protein HMPREF0666_02199 [Prevotella sp. C561]
gi|345042612|gb|EGW46708.1| hypothetical protein HMPREF0666_02199 [Prevotella sp. C561]
Length = 474
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQS 156
V GG+VRD L + DID+ + +GS +E S G A S F
Sbjct: 34 VVGGYVRDLFLERPSNDIDVVV---VGSGIQV-ASELKSILGRKAHLSVF---------- 79
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
++ TA +K +L ++FV R E YS +SR P + GT E+D RRD TIN++ +N
Sbjct: 80 RNFGTAQVKYKNLEVEFVGARKESYSHDSRKPVVENGTLEDDQNRRDFTINAMAVCLNKE 139
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L GI DL G I TPL P TF DDPLR++R +RF + +F +++E +A
Sbjct: 140 RFGELVDPFGGIDDLWDGIIRTPLDPDVTFSDDPLRMMRCVRFATQLNFFIEDETFEAL- 198
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
E A IS ER+ E++ ++ P K + CGL
Sbjct: 199 --ERNAERIKIISGERIEEELNKIMMTATPSKGFIELYRCGL 238
>gi|193215015|ref|YP_001996214.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Chloroherpeton thalassium ATCC 35110]
gi|193088492|gb|ACF13767.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Chloroherpeton thalassium ATCC 35110]
Length = 477
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 14/207 (6%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG+VRD LL + C DIDI + +G A + +T +GFG ++ L
Sbjct: 35 GGFVRDSLLQRKCKDIDIMV---VGEPIA------FAKAAKTKLNGFGFAVFERFRTARL 85
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVE 219
++ ++ ++FV R E YS SR P GT ++D RRD TIN+L ++N ++
Sbjct: 86 SLKDREMGEIELEFVGARKESYSPESRKPITEVGTLQDDLSRRDFTINALAVSLNQATFG 145
Query: 220 DLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDE 277
LT G DL + TPL P++TF DDPLR++RA RF ++ +F L+ E+ A +
Sbjct: 146 KLTDLFNGRNDLSAQLLRTPLEPESTFSDDPLRMMRAARFASQLNFNLEPEIFVAMQNMH 205
Query: 278 VKAALAAKISRERVGTEIDLMVSGNQP 304
+ + +S+ERV E+ +++ +P
Sbjct: 206 RRIGI---VSKERVRDELFKIMASPKP 229
>gi|150008663|ref|YP_001303406.1| tRNA nucleotidyltransferase [Parabacteroides distasonis ATCC 8503]
gi|256841303|ref|ZP_05546810.1| tRNA adenylyltransferase [Parabacteroides sp. D13]
gi|262383540|ref|ZP_06076676.1| tRNA nucleotidyltransferase [Bacteroides sp. 2_1_33B]
gi|301311477|ref|ZP_07217404.1| polyA polymerase family protein [Bacteroides sp. 20_3]
gi|423330569|ref|ZP_17308353.1| hypothetical protein HMPREF1075_00366 [Parabacteroides distasonis
CL03T12C09]
gi|149937087|gb|ABR43784.1| tRNA nucleotidyltransferase [Parabacteroides distasonis ATCC 8503]
gi|256737146|gb|EEU50473.1| tRNA adenylyltransferase [Parabacteroides sp. D13]
gi|262294438|gb|EEY82370.1| tRNA nucleotidyltransferase [Bacteroides sp. 2_1_33B]
gi|300830563|gb|EFK61206.1| polyA polymerase family protein [Bacteroides sp. 20_3]
gi|409232185|gb|EKN25033.1| hypothetical protein HMPREF1075_00366 [Parabacteroides distasonis
CL03T12C09]
Length = 476
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 112/221 (50%), Gaps = 20/221 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ G E A +VA+ + G G S K
Sbjct: 33 VIGGYVRDIFLNRPSKDIDVVAVGS-GIELAKRVAKKI---------GRGAYLS---VFK 79
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA +K DL ++FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 80 NFGTAQVKAGDLELEFVGARKESYSHDSRKPVVEDGTLEDDQNRRDFTINALALCLNKER 139
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ D+ I TPL P TF DDPLR++RA+RF + F +D + A
Sbjct: 140 YGELVDPFGGLEDMDELTIRTPLDPDVTFSDDPLRMMRAVRFATQLGFFIDPDTFDAIIR 199
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
+ + ++ IS+ER+ E++ +V +P + CGL
Sbjct: 200 NRERISI---ISKERIVDELNKIVLSPKPSIGFDLLDKCGL 237
>gi|423337833|ref|ZP_17315576.1| hypothetical protein HMPREF1059_01501 [Parabacteroides distasonis
CL09T03C24]
gi|409235906|gb|EKN28716.1| hypothetical protein HMPREF1059_01501 [Parabacteroides distasonis
CL09T03C24]
Length = 490
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 112/221 (50%), Gaps = 20/221 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ G E A +VA+ + G G S K
Sbjct: 47 VIGGYVRDIFLNRPSKDIDVVAVGS-GIELAKRVAKKI---------GRGAYLS---VFK 93
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA +K DL ++FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 94 NFGTAQVKAGDLELEFVGARKESYSHDSRKPVVEDGTLEDDQNRRDFTINALALCLNKER 153
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ D+ I TPL P TF DDPLR++RA+RF + F +D + A
Sbjct: 154 YGELVDPFGGLEDMDELTIRTPLDPDVTFSDDPLRMMRAVRFATQLGFFIDPDTFDAIIR 213
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
+ + ++ IS+ER+ E++ +V +P + CGL
Sbjct: 214 NRERISI---ISKERIVDELNKIVLSPKPSIGFDLLDKCGL 251
>gi|373461418|ref|ZP_09553158.1| hypothetical protein HMPREF9944_01422 [Prevotella maculosa OT 289]
gi|371952376|gb|EHO70215.1| hypothetical protein HMPREF9944_01422 [Prevotella maculosa OT 289]
Length = 484
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 26/242 (10%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL-SA 137
IF + + LE V GG+VRD L + DID+ + +GS +VA L S
Sbjct: 17 IFHLIADEADKLGLECY--VVGGYVRDLFLERPSNDIDVVV---VGS--GIQVASALKSR 69
Query: 138 TGETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
G+ A S F ++ TA +K L ++FV R E YS +SR P + GT E
Sbjct: 70 LGKRAHLSVF----------RNFGTAQVKYRSLEVEFVGARKESYSHDSRKPHVEDGTLE 119
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN+L +N L G+ D++ G I TPL P TF DDPLR+LR
Sbjct: 120 DDQNRRDFTINALAVCLNKERFGQLVDPFDGVYDIEDGIIRTPLDPDITFSDDPLRMLRC 179
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--C 312
IRF + +F +++E +A + + + +S ER+ EI+ ++ P K + C
Sbjct: 180 IRFATQLNFFIEDETFEALQRNAERIKI---VSGERIADEINKIMLTKTPSKGFIDLYRC 236
Query: 313 GL 314
GL
Sbjct: 237 GL 238
>gi|317050443|ref|YP_004111559.1| polynucleotide adenylyltransferase region [Desulfurispirillum
indicum S5]
gi|316945527|gb|ADU65003.1| Polynucleotide adenylyltransferase region [Desulfurispirillum
indicum S5]
Length = 502
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 131/292 (44%), Gaps = 51/292 (17%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFG---VIPSN 152
+R+AGGWVRD L G D+D+ L NM FA ++ + G+G +I
Sbjct: 31 VRIAGGWVRDHLRGIVTSDMDVLLLNMDAEAFAERLQQ----------RGYGSRHIIEPK 80
Query: 153 PDQSKHLETATMKLYDLWIDFVNLRCEDYSENSR----IPTMRFGTAE-------EDAYR 201
P Q++ T + C R + T+ G E +DA
Sbjct: 81 PAQARMARTVRV-------------CLSLPSGERFEVDLGTLATGDGESLDEALRQDAAG 127
Query: 202 RDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF 261
RDLTIN+LFY+ T++VED TG+G+ DL+ G + P + DDPLR+LR RF A
Sbjct: 128 RDLTINALFYDPATATVEDRTGQGLDDLRRGLLRVPGARRCNLWDDPLRLLRIARFHATT 187
Query: 262 DFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HICGLTLFWI 319
F ++ + + +++ L S ER+G E+ M S + +AM H CG+
Sbjct: 188 GFAVEAQTRCLMDDRQLQQRLVRCTSPERIGQELLAMWSHPRGSRAMELLHDCGVL---D 244
Query: 320 VFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAAL 371
L Q E E++E A+WD+ Q G N Q ++ A +
Sbjct: 245 ALLLASQGEGELVEQL---------ASWDMDQGNGHHALNLWQHSIAAMACM 287
>gi|431797757|ref|YP_007224661.1| tRNA nucleotidyltransferase/poly(A) polymerase [Echinicola
vietnamensis DSM 17526]
gi|430788522|gb|AGA78651.1| tRNA nucleotidyltransferase/poly(A) polymerase [Echinicola
vietnamensis DSM 17526]
Length = 476
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 124/243 (51%), Gaps = 32/243 (13%)
Query: 98 VAGGWVRDKLL---GKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNP 153
V GG+VRD LL K DID +GS T E ++ GE P S F
Sbjct: 29 VVGGFVRDLLLKRKNKKAKDIDFVC---VGSGI-TLAKEVAASFGEHVPLSVF------- 77
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNI 213
K+ TA +KL D ++FV R E Y +SR P + GT +ED RRD TIN++ +I
Sbjct: 78 ---KNFGTAMIKLEDWELEFVGARKESYRHDSRKPIVEDGTLQEDQERRDFTINAMAISI 134
Query: 214 NTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
N ++ +L G+ DLK I TPL P TF DDPLR+LRA+RF A+ DF +++
Sbjct: 135 NKANYGELVDPFDGVRDLKRKLIRTPLDPDTTFSDDPLRMLRAVRFAAQLDF----DIEP 190
Query: 272 AAASDEVKAALAAK-ISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPE 330
A ++ A K IS ER+ E++ ++ P G L + V KL Q PE
Sbjct: 191 ATFDGLIRNAERLKIISGERIIGELNKIILSETPS------YGFKLLF-VSKLLHQFFPE 243
Query: 331 VLE 333
+++
Sbjct: 244 MVD 246
>gi|189502253|ref|YP_001957970.1| hypothetical protein Aasi_0872 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497694|gb|ACE06241.1| hypothetical protein Aasi_0872 [Candidatus Amoebophilus asiaticus
5a2]
Length = 474
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 112/227 (49%), Gaps = 24/227 (10%)
Query: 85 NTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPS 144
+T +ET V GG+VRD L + DIDI G E A VA+ L GE
Sbjct: 18 DTADRLGIETC--VVGGFVRDLFLQRPSKDIDIVCVGN-GIELAQAVAQEL---GEDIVV 71
Query: 145 GFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDL 204
K TA ++ D ++FV R E YS +SR P + GT +D RRD
Sbjct: 72 HI---------FKTFGTAMLRWQDNEVEFVGARKESYSRDSRNPEVTQGTLVDDQLRRDF 122
Query: 205 TINSLFYNINTSS----VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
TIN+L IN S ++DL G ++DL+ I TPL P TF DDPLR++RAIRF +
Sbjct: 123 TINTLAIRINKSQWGELIDDLGG--VSDLQQKIIKTPLDPGITFSDDPLRMMRAIRFATQ 180
Query: 261 FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
F +DE S + A IS+ER+ E++ ++ + P K
Sbjct: 181 LRFTIDE---VTLMSIQQHAERIKIISQERITEELNKIILADIPSKG 224
>gi|325854980|ref|ZP_08171696.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Prevotella denticola CRIS 18C-A]
gi|325483958|gb|EGC86898.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Prevotella denticola CRIS 18C-A]
Length = 474
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 114/222 (51%), Gaps = 22/222 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQS 156
V GG+VRD L + DID+ + +GS +E S G+ A S F
Sbjct: 34 VVGGYVRDLFLERPSNDIDVVV---VGSGIQV-ASELKSVLGKKAHLSVF---------- 79
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
++ TA +K D ++FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 80 RNFGTAQVKYKDTEVEFVGARKESYSHDSRKPVVEDGTLEDDQNRRDFTINALAVCLNRE 139
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L G+ DL +G I TPL P TF DDPLR++R +RF + +F++++E +A
Sbjct: 140 RFGELVDPFGGVDDLWNGIIRTPLDPDVTFSDDPLRMMRCVRFATQLNFLIEDETFEAL- 198
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
E A +S ER+ E++ ++ P K + CGL
Sbjct: 199 --ERNADRIRIVSGERIEEELNKIMMTPTPSKGFVDLYRCGL 238
>gi|288803036|ref|ZP_06408472.1| polyA polymerase family protein [Prevotella melaninogenica D18]
gi|288334553|gb|EFC72992.1| polyA polymerase family protein [Prevotella melaninogenica D18]
Length = 474
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 116/223 (52%), Gaps = 24/223 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT-GETAP-SGFGVIPSNPDQ 155
V GG+VRD L + DID+ + +GS +VA L A G+ A S F
Sbjct: 34 VVGGYVRDLFLERPSNDIDVVV---VGS--GIQVASELKAILGKKAHLSVF--------- 79
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
++ TA +K ++ ++FV R E YS +SR P + GT E+D RRD TIN++ +N
Sbjct: 80 -RNFGTAQVKYRNIEVEFVGARKESYSHDSRKPIVEDGTLEDDQNRRDFTINAMAVCLNK 138
Query: 216 SSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+ +L GI DL G I TPL P TF DDPLR++R +RF + +F +++E +A
Sbjct: 139 ARFGELVDPFGGIDDLWDGIIRTPLDPDVTFSDDPLRMMRCVRFATQLNFFIEDETFEAL 198
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
E A IS ER+ E++ ++ P K + CGL
Sbjct: 199 ---ERNAERIKIISGERIEEELNKIMMTATPSKGFIELYRCGL 238
>gi|374385588|ref|ZP_09643091.1| hypothetical protein HMPREF9449_01477 [Odoribacter laneus YIT
12061]
gi|373225290|gb|EHP47624.1| hypothetical protein HMPREF9449_01477 [Odoribacter laneus YIT
12061]
Length = 471
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 112/232 (48%), Gaps = 21/232 (9%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT 138
IF L N+ET V GG+VRD LL + DIDI + G A A+ L
Sbjct: 10 IFHVLAEIAEENNIETY--VIGGYVRDLLLHRPSQDIDIVVQGN-GIALAEATAQKLGHL 66
Query: 139 GETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEED 198
+ FG TA + I+FV R E Y +SR P + GT ++D
Sbjct: 67 KVSVFKNFG-------------TAMFRYKGTEIEFVGARKESYRSDSRKPLVEAGTIDDD 113
Query: 199 AYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIR 256
RRD TIN+L ++N L +G+ L+ I TPL P TF DDPLR++RAIR
Sbjct: 114 QKRRDFTINALAISLNKKDYGRLVDPFKGLQHLQERLIKTPLEPGITFSDDPLRMMRAIR 173
Query: 257 FGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
F + +F ++E KA +++ + + IS ER+ E + ++ +P + +
Sbjct: 174 FATQLNFKIEENTFKAIRANKDRLTI---ISTERIMDEFNKIMLSPEPSRGI 222
>gi|408674884|ref|YP_006874632.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Emticicia oligotrophica DSM 17448]
gi|387856508|gb|AFK04605.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Emticicia oligotrophica DSM 17448]
Length = 520
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 120/245 (48%), Gaps = 20/245 (8%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT 138
IF + N +LE V GG+VRD L + DID+ G A KVA S
Sbjct: 43 IFEVIANAAS--DLEIDAYVIGGYVRDLFLDRPNKDIDVVCLGS-GIALAEKVA---SKL 96
Query: 139 GETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEED 198
G+ F K+ TA +K D+ I+FV R E Y +SR P + G+ E+D
Sbjct: 97 GDNVYVSF---------FKNFGTAQIKSGDIEIEFVGARKESYRYDSRKPLVEDGSLEDD 147
Query: 199 AYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIR 256
RRD TIN+L ++N + L G+ D+K I TPL P+ TF DDPLR++RA+R
Sbjct: 148 QNRRDFTINALGISLNKENFGQLIDPFGGVEDIKRKIIRTPLNPEITFSDDPLRMMRAVR 207
Query: 257 FGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTL 316
F ++ F +D A +S + + + +S+ER+ E++ +V P + L
Sbjct: 208 FASQLGFDIDGPTFDAISSMKDRIGI---VSQERITDELNKIVLSKTPSYGFKLLFYTGL 264
Query: 317 FWIVF 321
I+F
Sbjct: 265 LQIIF 269
>gi|304383950|ref|ZP_07366407.1| polyA polymerase [Prevotella marshii DSM 16973]
gi|304335028|gb|EFM01301.1| polyA polymerase [Prevotella marshii DSM 16973]
Length = 474
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 115/230 (50%), Gaps = 24/230 (10%)
Query: 91 NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT-GETAP-SGFGV 148
+L+ V GG+VRD L + DID+ + +GS KVA+ L G A S F
Sbjct: 27 DLQLECYVVGGYVRDLFLERPSNDIDVVV---VGS--GIKVADRLKQLLGRKAHLSVF-- 79
Query: 149 IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINS 208
K TA +K D+ I+FV R E YS +SR P + GT E+D RRD TIN+
Sbjct: 80 --------KRFGTAQVKYRDIEIEFVGARRESYSHDSRKPIVEDGTLEDDQCRRDFTINA 131
Query: 209 LFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
L +N L GIAD++ G I TPL P TF DDPLR++R +RF + F ++
Sbjct: 132 LAVCLNRERFGQLIDPFDGIADMEDGIIRTPLDPDVTFSDDPLRMMRCVRFATQLHFFIE 191
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HICGL 314
+E +A + + + +S ER+ E+ ++ P K H GL
Sbjct: 192 DETFEALVRNTDRLKI---VSGERIVDELHKIMMTRTPSKGFVDLHRTGL 238
>gi|298376033|ref|ZP_06985989.1| polyA polymerase family protein [Bacteroides sp. 3_1_19]
gi|298267070|gb|EFI08727.1| polyA polymerase family protein [Bacteroides sp. 3_1_19]
Length = 476
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 112/221 (50%), Gaps = 20/221 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ G E A +VA+ + G G S K
Sbjct: 33 VIGGYVRDIFLNRPSKDIDVVAVGS-GIELAKRVAKKI---------GRGAYLS---VFK 79
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA +K DL ++FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 80 NFGTAQVKAGDLELEFVGARKESYSHDSRKPVVEDGTLEDDQNRRDFTINALALCLNKER 139
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ D+ I TPL P TF DDPLR++RA+RF + F +D + A
Sbjct: 140 YGELVDPFGGLEDMDELTIRTPLDPDITFSDDPLRMMRAVRFATQLGFFIDPDTFDAIIR 199
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
+ + ++ IS+ER+ E++ +V +P + CGL
Sbjct: 200 NRERISI---ISKERIVDELNKIVLSPKPSIGFDLLDKCGL 237
>gi|260592681|ref|ZP_05858139.1| polyA polymerase family protein [Prevotella veroralis F0319]
gi|260535451|gb|EEX18068.1| polyA polymerase family protein [Prevotella veroralis F0319]
Length = 474
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 127/259 (49%), Gaps = 26/259 (10%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT 138
IF + N LE V GG+VRD L + DID+ + +GS +VA L A
Sbjct: 17 IFHHISNAADKLGLECY--VVGGYVRDLFLERPSNDIDVVV---VGS--GIQVASELKAV 69
Query: 139 -GETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
G+ A S F ++ TA +K ++FV R E YS +SR P + GT E
Sbjct: 70 LGKKAHLSVF----------RNFGTAQVKYKHTEVEFVGARRESYSHDSRKPVVEDGTLE 119
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN+L +N + +L G+ DL G I TPL P TF DDPLR++R
Sbjct: 120 DDQNRRDFTINALAVCLNKARFGELVDPFDGVDDLWDGIIRTPLDPDVTFSDDPLRMMRC 179
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGL 314
+RF + +F +++E +A E A IS ER+ E++ ++ P K +
Sbjct: 180 VRFATQLNFFIEDETFEAL---ERNAERIKIISGERIEEELNKIMMTPTPSKGFIDLYRC 236
Query: 315 TLFWIVFKLPLQVEPEVLE 333
L I+ LP V +V+E
Sbjct: 237 GLLQII--LPELVALDVVE 253
>gi|332878045|ref|ZP_08445775.1| HDIG domain protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|357047709|ref|ZP_09109307.1| HDIG domain protein [Paraprevotella clara YIT 11840]
gi|332684007|gb|EGJ56874.1| HDIG domain protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|355529397|gb|EHG98831.1| HDIG domain protein [Paraprevotella clara YIT 11840]
Length = 493
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 123/245 (50%), Gaps = 31/245 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DIDI +GS A +A+ L+ G + SN
Sbjct: 34 VVGGYVRDLFLERPSQDIDIV---TVGSGIA--LAKALA--GRLGRGAHLSVFSN----- 81
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
TA +K + ++ V R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 82 -FGTAQVKFKGMEVELVGARKESYSHDSRKPVVEDGTLEDDQNRRDFTINALAVCLNRER 140
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ D++ + TPL P TF DDPLR++R +RF + +F +DEE +A
Sbjct: 141 FGELVDPFDGVWDMEDRLVRTPLDPDITFSDDPLRMMRCVRFATQLNFYIDEETFEALER 200
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGLTLFWIVFKLPLQVEPEV-- 331
+ + + ISRER+ E++ ++ P K + CGL LPL + PE+
Sbjct: 201 NRERIKI---ISRERIADELNKIMMTPTPSKGFVELARCGL--------LPL-IFPELAA 248
Query: 332 LEGCE 336
+EG E
Sbjct: 249 MEGVE 253
>gi|167752331|ref|ZP_02424458.1| hypothetical protein ALIPUT_00575 [Alistipes putredinis DSM 17216]
gi|167660572|gb|EDS04702.1| HDIG domain protein [Alistipes putredinis DSM 17216]
Length = 472
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 104/216 (48%), Gaps = 34/216 (15%)
Query: 98 VAGGWVRDKLLGKDCYDID-------IALDNMMGSEFATKVAEYLSATGETAPSGFGVIP 150
V GG+VRD LG+ DID I L +G E TKV+ Y
Sbjct: 31 VVGGYVRDFYLGRPSTDIDVVVVGSGIGLAEELGRELRTKVSVY---------------- 74
Query: 151 SNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLF 210
K TA ++ + ++FV R E Y +SR P + GT E+D RRD TIN++
Sbjct: 75 ------KTFGTAALRTKGVEVEFVGARKESYVRDSRKPQVEAGTLEDDQRRRDFTINAMA 128
Query: 211 YNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
+++ L G+ DL G I TP P TF DDPLR++RA+RF ++ +F L E
Sbjct: 129 WSLGEEDFGRLVDPFDGMRDLHEGIIRTPCDPDVTFSDDPLRMMRAVRFASQLNFRLFPE 188
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+A + + + +SRER+ E++ +V P
Sbjct: 189 TFEAIVRNRERIGI---VSRERIAVELNKIVLSPVP 221
>gi|293371097|ref|ZP_06617634.1| HD domain protein [Bacteroides ovatus SD CMC 3f]
gi|292633755|gb|EFF52307.1| HD domain protein [Bacteroides ovatus SD CMC 3f]
Length = 474
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 121/245 (49%), Gaps = 20/245 (8%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT 138
IF + T +E V GG+VRD L + DID+ + +GS A +AE A
Sbjct: 14 IFGQIAETADTLGMECY--VVGGYVRDIFLQRPSKDIDVVV---VGSGIA--MAE---AL 63
Query: 139 GETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEED 198
G+ G V K+ TA +K ++FV R E Y +SR P + GT E+D
Sbjct: 64 GKQLGRGAHV-----SVFKNFGTAQVKYRGTEVEFVGARKESYQRDSRKPIVEDGTLEDD 118
Query: 199 AYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIR 256
RRD TIN+L +N + +L G+ D+K I TPL P TF DDPLR++R IR
Sbjct: 119 QNRRDFTINALAVCLNKARFGELVDPFGGLEDMKEKTIRTPLDPDITFSDDPLRMMRCIR 178
Query: 257 FGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTL 316
F + F +D++ ++ ++ + + ISRER+ E++ ++ P K + L
Sbjct: 179 FATQLGFYIDDDTFESLCRNKERIEI---ISRERIADELNKIILSPIPSKGFIDLERSGL 235
Query: 317 FWIVF 321
++F
Sbjct: 236 LSLIF 240
>gi|307565902|ref|ZP_07628361.1| HDIG domain protein [Prevotella amnii CRIS 21A-A]
gi|307345330|gb|EFN90708.1| HDIG domain protein [Prevotella amnii CRIS 21A-A]
Length = 474
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 113/222 (50%), Gaps = 22/222 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL-SATGETAPSGFGVIPSNPDQS 156
V GG+VRD L + DID+ + +GS KVA L + G+ A
Sbjct: 34 VVGGYVRDLFLERPSNDIDVVV---VGS--GIKVAHELKNILGKQAHISI---------F 79
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K+ TA +K ++ ++FV R E YS +SR P + GT E+D RRD TIN++ +N+
Sbjct: 80 KNFGTAQVKYKNIEVEFVGARKESYSHDSRKPLVENGTLEDDQNRRDFTINAMAICLNSH 139
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
L GI DL G I TPL P TF DDPLR++R +RF + +F ++++ A
Sbjct: 140 LFGKLIDPFGGIDDLWDGIIRTPLDPDVTFSDDPLRMMRCVRFATQLNFFIEDD---TFA 196
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
+ E A IS ER+ E++ ++ P K + CGL
Sbjct: 197 ALERNAERIKIISNERIIEELNKIIMTKTPSKGFVDLQRCGL 238
>gi|373501557|ref|ZP_09591907.1| hypothetical protein HMPREF9140_02025 [Prevotella micans F0438]
gi|371948126|gb|EHO66015.1| hypothetical protein HMPREF9140_02025 [Prevotella micans F0438]
Length = 475
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 121/259 (46%), Gaps = 26/259 (10%)
Query: 71 ELTDTE------TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMG 124
EL+D E IF + + LE V GG+VRD L + DID+ + G
Sbjct: 3 ELSDAELAKLLDKDIFHRISDAADSLGLECY--VVGGYVRDLFLERPSDDIDVVVVGN-G 59
Query: 125 SEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSEN 184
AT++ + L +N ++ TA +K D+ I+FV R E Y+ +
Sbjct: 60 ISLATELKKQLGRK------------ANLSVFRNFGTAQVKSKDMEIEFVGARKESYTHD 107
Query: 185 SRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKA 242
SR P + GT E+D RRD TIN+L +N L G+ADL I TPL P
Sbjct: 108 SRKPIVENGTLEDDQNRRDFTINALAVCLNKKRFGKLVDPFDGVADLWDRTIRTPLDPDI 167
Query: 243 TFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN 302
TF DDPLR++R IRF A+ +F + +E +A E A +S ER+ E++ ++
Sbjct: 168 TFSDDPLRMIRCIRFAAQLNFYIADETFEAL---ERNAERIKIVSGERIADELNKIIMTP 224
Query: 303 QPVKAMTHICGLTLFWIVF 321
P K + L I+
Sbjct: 225 TPSKGFVELYRTKLLHIIM 243
>gi|255536246|ref|YP_003096617.1| tRNA nucleotidyltransferase [Flavobacteriaceae bacterium 3519-10]
gi|255342442|gb|ACU08555.1| tRNA nucleotidyltransferase [Flavobacteriaceae bacterium 3519-10]
Length = 506
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 26/279 (9%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
+ GG+VRD L+ + DID + G + A +A ++ + S F
Sbjct: 64 IVGGYVRDLLMKRGVPSDIDFVTEGS-GIDLAQALANEINPRWKV--SVF---------- 110
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K+ TA K L ++FV R E Y+E+SR P + GT E+D RRD T+N+L ++N
Sbjct: 111 KNYGTAMFKHNGLDLEFVGARKESYAEDSRNPAVEAGTLEDDQKRRDFTVNALAISLNKE 170
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ +L GI+DLK+ I TPL P T+ DDPLR+LRAIRF + F ++E + A
Sbjct: 171 NFGELIDPFGGISDLKNKIIRTPLEPSQTYSDDPLRMLRAIRFASTLRFKIEE---NSLA 227
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEG 334
+ + +A +SRER+ E + ++ +P + + L I+ LP E L G
Sbjct: 228 AIKTEAERIKIVSRERIMVEFNKIMLSEKPSAGLKILEQTGLMQII--LP---ELTALRG 282
Query: 335 C-EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALF 372
E+ + D W +++ + + N D L ++AAL
Sbjct: 283 IEEVEGQTHKDNFWHTLEVVDNISKNTDSLWL-RWAALL 320
>gi|334364306|ref|ZP_08513298.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Alistipes sp. HGB5]
gi|313159501|gb|EFR58864.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Alistipes sp. HGB5]
Length = 469
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 110/220 (50%), Gaps = 36/220 (16%)
Query: 98 VAGGWVRDKLLGKDCYDID-------IALDNMMGSEFATKVAEYLSATGETAPSGFGVIP 150
V GG+VRD L + DID IAL +G E KV+ +
Sbjct: 24 VVGGYVRDHFLRRPSTDIDVVVVGSGIALAEALGRELHAKVSVF---------------- 67
Query: 151 SNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLF 210
K TA ++ + ++FV R E Y+++SR P + GT E+D RRD TIN++
Sbjct: 68 ------KTFGTAMLRHKGVEVEFVGARRESYTQDSRKPQVEAGTLEDDQRRRDFTINAMA 121
Query: 211 YNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
+++N S +L G+ DL+ I TP P TF DDPLR++RA+RF ++ F ++ E
Sbjct: 122 WSLNAGSFGELVDPFDGMDDLEECVIRTPCDPDVTFSDDPLRMMRAVRFASQLGFTIEGE 181
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A + + + +SRER+ E++ +V PV +M
Sbjct: 182 TFDAIRRNAHRIRI---VSRERIAAELNKIVL--SPVPSM 216
>gi|86133852|ref|ZP_01052434.1| multifunctional CCA protein [Polaribacter sp. MED152]
gi|85820715|gb|EAQ41862.1| multifunctional CCA protein [Polaribacter sp. MED152]
Length = 487
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 130/254 (51%), Gaps = 34/254 (13%)
Query: 91 NLETVLRVAGGWVRDKLLGKD-CYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVI 149
NLE V GG+VRD L + DIDI G + A +V++ L
Sbjct: 38 NLEIDAYVIGGYVRDFFLDRGTAKDIDIVAVGS-GIDLALQVSKLL-------------- 82
Query: 150 PSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTIN 207
P+ P K TA ++ D+ I+FV R E Y+ENSR P + GT +D RRD TIN
Sbjct: 83 PNKPKVQVFKTYGTAMLRYKDIEIEFVGARKESYTENSRNPQVSSGTLVDDQNRRDFTIN 142
Query: 208 SLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFIL 265
+L ++N ++ D+ G+ DL+ I TPL P T+ DDPLR++RAIRF + +F
Sbjct: 143 ALALSLNDANFGDILDPFNGMKDLEDKIIRTPLNPDITYSDDPLRMMRAIRFATQLNF-- 200
Query: 266 DEELKKAAASDEVKAALAAK-ISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
E++ ++ + K A K I++ER+ E++ +++ +P G L LP
Sbjct: 201 --EIEASSLAAISKNAHRLKIITKERIVVELNKILAAKKPS------IGFLLLEKTKLLP 252
Query: 325 LQVEPEV--LEGCE 336
Q+ PE+ L+G E
Sbjct: 253 -QILPELIALKGVE 265
>gi|311746152|ref|ZP_07719937.1| polyA polymerase family protein [Algoriphagus sp. PR1]
gi|126576375|gb|EAZ80653.1| polyA polymerase family protein [Algoriphagus sp. PR1]
Length = 483
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 101/196 (51%), Gaps = 20/196 (10%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK---DCYDIDIALDNMMGSEFATKVA 132
E ++FS + + LE V GG+VRD +L + D DID G E A +VA
Sbjct: 9 EIEVFSKVAKAAQDLGLEAY--VVGGYVRDLILNRKKSDKRDIDFTCVGS-GIELAEEVA 65
Query: 133 EYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRF 192
+ S F K+ TA +KL + ++FV R E Y SR P +
Sbjct: 66 KNFDY--HVPVSVF----------KNFGTAMVKLEEWELEFVGARKESYRSESRKPIVED 113
Query: 193 GTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLR 250
GT +ED RRD TIN++ +++ S+ DL G+ DLK I TPL P TF DDPLR
Sbjct: 114 GTLQEDLERRDFTINAMAISLHASNYGDLLDPFEGLVDLKRKTIRTPLEPSITFSDDPLR 173
Query: 251 VLRAIRFGARFDFILD 266
+LRAIRF A+ DF +D
Sbjct: 174 MLRAIRFAAQLDFDID 189
>gi|327313325|ref|YP_004328762.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Prevotella denticola F0289]
gi|326945762|gb|AEA21647.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Prevotella denticola F0289]
Length = 474
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 113/222 (50%), Gaps = 22/222 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQS 156
V GG+VRD L + DID+ + +GS +E S G+ A S F
Sbjct: 34 VVGGYVRDLFLERPSNDIDVVV---VGSGIQV-ASELKSVLGKKAHLSVF---------- 79
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
++ TA +K D ++FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 80 RNFGTAQVKYKDTEVEFVGARKESYSHDSRKPVVEDGTLEDDQNRRDFTINALAVCLNRE 139
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L G+ DL G I TPL P TF DDPLR++R +RF + +F++++E +A
Sbjct: 140 RFGELVDPFGGVDDLWDGIIRTPLDPDVTFSDDPLRMMRCVRFATQLNFLIEDETFEAL- 198
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
E A +S ER+ E++ ++ P K + CGL
Sbjct: 199 --ERNADRIRIVSGERIEEELNKIMMTPTPSKGFVDLYRCGL 238
>gi|357042004|ref|ZP_09103711.1| hypothetical protein HMPREF9138_00183 [Prevotella histicola F0411]
gi|355370018|gb|EHG17407.1| hypothetical protein HMPREF9138_00183 [Prevotella histicola F0411]
Length = 474
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 121/242 (50%), Gaps = 26/242 (10%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT 138
IF + ++ LE V GG+VRD L + DID+ + +GS +VA L A
Sbjct: 17 IFHHISDSADKLGLECY--VVGGYVRDLFLERPSNDIDVVV---VGS--GIQVASELKAM 69
Query: 139 -GETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
G+ A S F ++ TA +K + ++FV R E YS +SR P + GT E
Sbjct: 70 LGKRAHLSVF----------RNFGTAQVKYKNTEVEFVGARKESYSHDSRKPIVEDGTLE 119
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN+L +N +L G+ DL G I TPL P TF DDPLR+LR
Sbjct: 120 DDQNRRDFTINALAVCLNKDHFGELVDPFGGVDDLWDGIIRTPLDPDVTFSDDPLRMLRC 179
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--C 312
+RF + +F +++E +A E A IS ER+ E++ ++ P K + C
Sbjct: 180 VRFATQLNFFIEDETFEAL---ERNAERIKIISGERIEEELNKIMMTPTPSKGFIELYRC 236
Query: 313 GL 314
GL
Sbjct: 237 GL 238
>gi|440748568|ref|ZP_20927820.1| tRNA nucleotidyltransferase [Mariniradius saccharolyticus AK6]
gi|436483076|gb|ELP39152.1| tRNA nucleotidyltransferase [Mariniradius saccharolyticus AK6]
Length = 472
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 132/260 (50%), Gaps = 27/260 (10%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL 135
+ +IF+ + +ET V GG+VRD +L + DID +GS ++A +
Sbjct: 9 QQEIFARVGRIADQLGMETY--VVGGYVRDLILNRPSKDIDFVC---VGS--GIQLAHAV 61
Query: 136 SATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
+A+ + +P N K+ TA ++L D ++FV R E Y +SR P + GT
Sbjct: 62 AASFDKH------VPLNV--FKNFGTANIRLDDWDVEFVGARRESYRHDSRKPIVEDGTL 113
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
+ED RRD TIN+L +N + +L G+ D+K I TP P TF DDPLR++R
Sbjct: 114 QEDQERRDFTINALAICVNAARYGELIDPFDGLGDMKRKIIRTPTDPIITFSDDPLRMMR 173
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICG 313
AIRF A+ F ++ E A D + + +S ERV E++ ++ +P G
Sbjct: 174 AIRFAAQLHFDIEPETFMAIVHDAHRIQI---VSAERVIDELNKIIMTPKPS------YG 224
Query: 314 LTLFWIVFKLPLQVEPEVLE 333
L + V KL ++ PE++E
Sbjct: 225 FKLLF-VSKLLQEIFPEMVE 243
>gi|332293599|ref|YP_004432208.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Krokinobacter sp. 4H-3-7-5]
gi|332171685|gb|AEE20940.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Krokinobacter sp. 4H-3-7-5]
Length = 471
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 119/235 (50%), Gaps = 26/235 (11%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLL--GKDCYDIDIALDNMMGSEFATKVAEYLS 136
IF+ + N LET V GG+VRD LL K+ DID+ G A KV++
Sbjct: 11 IFNNISNAADALELETY--VIGGFVRDYLLKRNKEVKDIDVVAVGS-GIALARKVSQ--- 64
Query: 137 ATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGT 194
++P+ P K TA ++ ++ I+FV R E Y+ SR P + GT
Sbjct: 65 -----------ILPNKPKVQVFKTYGTAMLRSGNMDIEFVGARKESYATESRNPVVEDGT 113
Query: 195 AEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVL 252
E+D RRD TIN+L +N + D+ GI+DL+ I TPL P T+ DDPLR++
Sbjct: 114 LEDDQNRRDFTINALAIKLNDNGYGDVIDPFNGISDLERKIIRTPLDPDITYSDDPLRMM 173
Query: 253 RAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
RAIRF ++ DF+++ + + S A I+ ER+ E++ ++ P K
Sbjct: 174 RAIRFASQLDFMIE---RTSLESITKNAERIKIITNERIVDELNKIMLSPTPSKG 225
>gi|294809798|ref|ZP_06768482.1| HD domain protein [Bacteroides xylanisolvens SD CC 1b]
gi|294443038|gb|EFG11821.1| HD domain protein [Bacteroides xylanisolvens SD CC 1b]
Length = 474
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 121/245 (49%), Gaps = 20/245 (8%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT 138
IF + T +E V GG+VRD L + DID+ + +GS A +AE A
Sbjct: 14 IFGQIAETADALGMECY--VVGGYVRDIFLQRPSKDIDVVV---VGSGIA--MAE---AL 63
Query: 139 GETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEED 198
G+ G V K+ TA +K ++FV R E Y +SR P + GT E+D
Sbjct: 64 GKRLGRGAHV-----SVFKNFGTAQVKYRGTEVEFVGARKESYQRDSRKPIVEDGTLEDD 118
Query: 199 AYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIR 256
RRD TIN+L +N + +L G+ D+K I TPL P TF DDPLR++R IR
Sbjct: 119 QNRRDFTINALAVCLNKARFGELVDPFGGMEDMKEKTIRTPLDPDITFSDDPLRMMRCIR 178
Query: 257 FGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTL 316
F + F +D++ ++ ++ + + ISRER+ E++ ++ P K + L
Sbjct: 179 FATQLGFYIDDDTFESLCRNKERIEI---ISRERIADELNKIILSPIPSKGFIDLERSGL 235
Query: 317 FWIVF 321
++F
Sbjct: 236 LPLIF 240
>gi|354604728|ref|ZP_09022717.1| hypothetical protein HMPREF9450_01632 [Alistipes indistinctus YIT
12060]
gi|353347307|gb|EHB91583.1| hypothetical protein HMPREF9450_01632 [Alistipes indistinctus YIT
12060]
Length = 467
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 120/223 (53%), Gaps = 28/223 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + C DIDI + +GS +VAE L +T S F K
Sbjct: 26 VIGGYVRDHFLHRPCTDIDIVV---VGS--GIEVAEALGRELKTKVSVF----------K 70
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA ++ ++FV R E Y +SR P + GT E+D RRD TIN++ +++N +
Sbjct: 71 NFGTAMLRCDGWEVEFVGARKESYRADSRKPIVEDGTIEDDQLRRDFTINAMAFSLNAGT 130
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ DL++ I TP TF DDPLR++RAIRF + F +++E +A
Sbjct: 131 FGELVDPFDGMRDLENYIIRTPCDSDTTFSDDPLRMIRAIRFATQLGFDIEDETFEAIRR 190
Query: 276 DEVKAALAAKISRERVGTEID-LMVSGNQPVKAMTHICGLTLF 317
+ + + IS+ER+ TE++ +M+S PV ++ G LF
Sbjct: 191 NRERIEI---ISQERIITEMNKIMLS---PVPSI----GFQLF 223
>gi|429742243|ref|ZP_19275886.1| HDIG domain protein [Porphyromonas catoniae F0037]
gi|429157289|gb|EKX99889.1| HDIG domain protein [Porphyromonas catoniae F0037]
Length = 483
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 119/239 (49%), Gaps = 27/239 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQS 156
V GG+VRD L + DIDI + G + A VAE L + + + FG
Sbjct: 32 VVGGYVRDLFLYRPSKDIDI-VSVGRGIDLAKAVAERLGRGAKLSVFARFG--------- 81
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA +K D+ ++FV R E YS +SR P + GT +ED RRD TIN+L +N
Sbjct: 82 ----TAQVKKGDIELEFVGARRESYSPDSRKPFVEDGTLQEDQERRDFTINALALCLNAD 137
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L G+ D+ + + TPL P TF DDPLR++RAIRF ++ F +D + A
Sbjct: 138 RFGELVDPFDGLDDMDNLTLRTPLDPDVTFSDDPLRMMRAIRFASQLGFFIDPDTFAAIG 197
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
+ + ++ +S ER+ TE + ++ +P + L I+F PE+LE
Sbjct: 198 RNRERISI---VSAERISTEFNKILLSPRPSVGLELFEQTGLMEILF-------PELLE 246
>gi|325955576|ref|YP_004239236.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Weeksella virosa DSM 16922]
gi|323438194|gb|ADX68658.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Weeksella virosa DSM 16922]
Length = 473
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 113/214 (52%), Gaps = 21/214 (9%)
Query: 98 VAGGWVRDKLLGKDC-YDID-IALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
V GG+VRD LL + DID + + N G A KVA+ L T + S F
Sbjct: 28 VVGGFVRDFLLERPGKQDIDFVTVGN--GIILAEKVAKKLGNTSKV--SVF--------- 74
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
K TA K + ++FV R E YSE+SR P + GT E+D RRD TIN+L ++N
Sbjct: 75 -KRFGTAMFKYQNKELEFVGARKESYSEDSRKPFVENGTLEDDQKRRDFTINALAISLNH 133
Query: 216 SSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
L GI DL+ I TPL P T+ DDPLR++RAIRF A+ DF ++E+ +A
Sbjct: 134 EDFGQLIDPFDGIQDLEDKIIRTPLDPVITYSDDPLRMMRAIRFAAQLDFSIEEKSFRAI 193
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
+ + + +S+ERV E + ++ +P K
Sbjct: 194 QENAHRLEI---VSKERVMDEFNKIMLTQKPSKG 224
>gi|381187912|ref|ZP_09895474.1| tRNA nucleotidyltransferase [Flavobacterium frigoris PS1]
gi|379649700|gb|EIA08273.1| tRNA nucleotidyltransferase [Flavobacterium frigoris PS1]
Length = 473
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 122/233 (52%), Gaps = 25/233 (10%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYL 135
KIF + N+++ V GG+VRD +L +D DIDI G E A KV++ L
Sbjct: 9 NKIFQVISQASEELNVDSY--VIGGFVRDLILKRDFKKDIDIVAVGS-GIELALKVSQLL 65
Query: 136 SATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG 193
P+ P K+ TA ++ D I+FV R E Y SR P + G
Sbjct: 66 --------------PNKPKVQVFKNYGTAMLRFEDTEIEFVGARKESYHFESRNPVVENG 111
Query: 194 TAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRV 251
T ++D RRD TIN+L ++N+++ +L G+ D+++ + TPL P T+ DDPLR+
Sbjct: 112 TLQDDQDRRDFTINALAISLNSNTFGELLDPFDGLKDMRNKILKTPLNPDITYSDDPLRM 171
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+RAIRF + F ++E ++ + + + IS ER+ E++ ++S ++P
Sbjct: 172 MRAIRFANQLHFEIEENSLQSITKNAERIKI---ISGERIVDELNKILSTDKP 221
>gi|218262165|ref|ZP_03476724.1| hypothetical protein PRABACTJOHN_02398 [Parabacteroides johnsonii
DSM 18315]
gi|423343257|ref|ZP_17320971.1| hypothetical protein HMPREF1077_02401 [Parabacteroides johnsonii
CL02T12C29]
gi|218223571|gb|EEC96221.1| hypothetical protein PRABACTJOHN_02398 [Parabacteroides johnsonii
DSM 18315]
gi|409216197|gb|EKN09184.1| hypothetical protein HMPREF1077_02401 [Parabacteroides johnsonii
CL02T12C29]
Length = 476
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 125/245 (51%), Gaps = 31/245 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ G E A VA+ L G G S K
Sbjct: 33 VIGGYVRDIFLHRPSKDIDVVAVGS-GIELAKAVAKKL---------GRGAYLS---VFK 79
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA +K DL ++FV R E Y+ +SR P + GT E+D RRD TIN+L +N
Sbjct: 80 NFGTAQVKAGDLELEFVGARKESYTHDSRKPIVEDGTLEDDQNRRDFTINALALCLNKDR 139
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ D+ + I TPL P TF DDPLR++RA+RF ++ F +D + A
Sbjct: 140 YGELVDPFDGLTDMDNLLIRTPLDPDITFSDDPLRMMRAVRFASQLGFFIDPDTFDAIER 199
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGLTLFWIVFKLPLQVEPEV-- 331
++ + ++ IS+ER+ E++ +V +P + CGL LPL + PE+
Sbjct: 200 NKERISI---ISKERIVDELNKIVLSPKPSVGFDLLDRCGL--------LPL-IFPELCA 247
Query: 332 LEGCE 336
L+G E
Sbjct: 248 LKGVE 252
>gi|423347023|ref|ZP_17324710.1| hypothetical protein HMPREF1060_02382 [Parabacteroides merdae
CL03T12C32]
gi|409218684|gb|EKN11652.1| hypothetical protein HMPREF1060_02382 [Parabacteroides merdae
CL03T12C32]
Length = 477
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 113/221 (51%), Gaps = 20/221 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ G E A VA L G G S K
Sbjct: 33 VIGGYVRDIFLHRPSKDIDVVAVGS-GIELAKAVARKL---------GRGAYLS---VFK 79
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA +K DL ++FV R E Y+ +SR P + GT E+D RRD TIN+L +N
Sbjct: 80 NFGTAQVKAGDLELEFVGARKESYTHDSRKPIVEDGTLEDDQNRRDFTINALALCLNKDR 139
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ D+ + I TPL P TF DDPLR++RA+RF ++ F +D + A
Sbjct: 140 YGELVDPFDGLTDMDNLLIRTPLDPDITFSDDPLRMMRAVRFASQLGFFIDPDTFDAIER 199
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKA--MTHICGL 314
++ + ++ IS+ER+ E++ +V +P + CGL
Sbjct: 200 NKERISI---ISKERIVDELNKIVLSPKPSVGFDLLERCGL 237
>gi|154494462|ref|ZP_02033782.1| hypothetical protein PARMER_03817 [Parabacteroides merdae ATCC
43184]
gi|423725361|ref|ZP_17699498.1| hypothetical protein HMPREF1078_03387 [Parabacteroides merdae
CL09T00C40]
gi|154085906|gb|EDN84951.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Parabacteroides merdae ATCC 43184]
gi|409234485|gb|EKN27313.1| hypothetical protein HMPREF1078_03387 [Parabacteroides merdae
CL09T00C40]
Length = 477
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 113/221 (51%), Gaps = 20/221 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ G E A VA L G G S K
Sbjct: 33 VIGGYVRDIFLHRPSKDIDVVAIGS-GIELAKAVARKL---------GRGAYLS---VFK 79
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA +K DL ++FV R E Y+ +SR P + GT E+D RRD TIN+L +N
Sbjct: 80 NFGTAQVKAGDLELEFVGARKESYTHDSRKPIVEDGTLEDDQNRRDFTINALALCLNKDR 139
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ D+ + I TPL P TF DDPLR++RA+RF ++ F +D + A
Sbjct: 140 YGELVDPFDGLTDMDNLLIRTPLDPDITFSDDPLRMMRAVRFASQLGFFIDPDTFDAIER 199
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKA--MTHICGL 314
++ + ++ IS+ER+ E++ +V +P + CGL
Sbjct: 200 NKERISI---ISKERIVDELNKIVLSPKPSVGFDLLERCGL 237
>gi|302345230|ref|YP_003813583.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Prevotella melaninogenica ATCC 25845]
gi|302148944|gb|ADK95206.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Prevotella melaninogenica ATCC 25845]
Length = 474
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 115/223 (51%), Gaps = 24/223 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT-GETAP-SGFGVIPSNPDQ 155
V GG+VRD L + DID+ + +GS +VA L G+ A S F
Sbjct: 34 VVGGYVRDLFLERPSNDIDVVV---VGS--GIQVASELKVILGKKAHLSVF--------- 79
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
++ TA +K ++ ++FV R E YS +SR P + GT E+D RRD TIN++ +N
Sbjct: 80 -RNFGTAQVKYKNIEVEFVGARKESYSHDSRKPIVEDGTLEDDQNRRDFTINAMAVCLNK 138
Query: 216 SSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+ +L GI DL G I TPL P TF DDPLR++R +RF + +F +++E +A
Sbjct: 139 ARFGELVDPFGGIDDLWDGIIRTPLDPDVTFSDDPLRMMRCVRFATQLNFFIEDETFEAL 198
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
E A IS ER+ E++ ++ P K + CGL
Sbjct: 199 ---ERNAERIKIISGERIEEELNKIMMTATPSKGFIELYRCGL 238
>gi|119356930|ref|YP_911574.1| metal dependent phosphohydrolase [Chlorobium phaeobacteroides DSM
266]
gi|119354279|gb|ABL65150.1| metal dependent phosphohydrolase [Chlorobium phaeobacteroides DSM
266]
Length = 470
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSE--FATKVAEYLSATGETAPSGFGVIPSNPDQ 155
V GG+VRD L+ + C DIDI + +G FA + L F +
Sbjct: 29 VVGGYVRDMLMHRSCSDIDIMV---IGDPLPFAQTIKNELPGRNLVVFERF--------R 77
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
+ LE + + ++ V R E Y+ +SR P GT EED RRD TIN+L ++N+
Sbjct: 78 TAQLEVSDSEKQTFKLEIVGARKESYNPDSRKPITETGTLEEDLARRDFTINALALSLNS 137
Query: 216 SSVEDLTGR--GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
SS L + GI L + TPL PK TF DDPLR++RA RF A+ DF LDE +
Sbjct: 138 SSRGLLVDQFNGIEHLSGRILRTPLEPKQTFSDDPLRMMRAARFSAQLDFRLDEAI--IL 195
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
A +E+ + +SRER+ E ++ +P ++
Sbjct: 196 AMNEMHERIRI-VSRERISQEFLKIMQCPKPSAGLS 230
>gi|390944625|ref|YP_006408386.1| tRNA nucleotidyltransferase/poly(A) polymerase [Belliella baltica
DSM 15883]
gi|390418053|gb|AFL85631.1| tRNA nucleotidyltransferase/poly(A) polymerase [Belliella baltica
DSM 15883]
Length = 471
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 120/239 (50%), Gaps = 27/239 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQS 156
V GG+VRD ++G+ C D+D G AT+V+E + G+ P S F
Sbjct: 29 VVGGYVRDLIMGRPCKDLDFVCVGS-GIALATQVSE---SFGKHVPLSVF---------- 74
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K+ TA +KL D ++FV R E Y +SR P + GT +ED RRD TIN++ +N S
Sbjct: 75 KNFGTAMIKLDDYELEFVGARKESYRTDSRKPLVEDGTLQEDQERRDFTINAMAICLNES 134
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L G+ D+K I TP TF DDPLR++RAIRF + +F +D +
Sbjct: 135 RFGELIDPFNGLKDIKRKIIKTPTDSNITFSDDPLRMMRAIRFATQLNFDIDADTFDGLI 194
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
+ + + IS ER+ E++ ++ +P G L + KL Q PE++E
Sbjct: 195 QNAERLRI---ISGERIIDELNKIILAEKPS------YGFKLLF-ASKLLHQFFPEMVE 243
>gi|150025694|ref|YP_001296520.1| tRNA nucleotidyltransferase [Flavobacterium psychrophilum JIP02/86]
gi|149772235|emb|CAL43711.1| tRNA nucleotidyltransferase [Flavobacterium psychrophilum JIP02/86]
Length = 473
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 25/233 (10%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYL 135
KIF + + ++++ V GG+VRD +L ++ DIDI G E A KV+
Sbjct: 9 NKIFEIISEASQELSIDSY--VIGGFVRDLILKREFKKDIDIVAVGS-GIELALKVS--- 62
Query: 136 SATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG 193
++P P K TA ++ D I+FV R E Y+ SR P + G
Sbjct: 63 -----------ALLPHKPKVQVFKTYGTAMLRFEDTEIEFVGARKESYNLESRNPVVENG 111
Query: 194 TAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRV 251
T E+D RRD TIN+L ++N ++ +L G+ DL++ I TPL P T+ DDPLR+
Sbjct: 112 TLEDDQNRRDFTINALAISLNKTNYGELLDPFDGLTDLENKTIKTPLDPDITYSDDPLRM 171
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
LR IRF + F ++E + A + + + IS ER+ E++ ++S ++P
Sbjct: 172 LRGIRFATQLGFTIEENSLNSIAKNTDRINI---ISGERIVDELNKILSSDKP 221
>gi|218961944|ref|YP_001741719.1| Putative polyA polymerase (fragment), partial [Candidatus
Cloacamonas acidaminovorans]
gi|167730601|emb|CAO81513.1| Putative polyA polymerase (fragment) [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 237
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 111/231 (48%), Gaps = 24/231 (10%)
Query: 99 AGGWVRDKLLGKDCY---DIDIALDNMMGS-EFATKVAEYLSATGETAPSGFGVIPSNPD 154
AGG VRD +L D D+DI ++ G A + L A+ FG
Sbjct: 26 AGGCVRDFILDPDATLKGDVDICVELPEGGIALAQYLQNRLQASELVIHKSFG------- 78
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
TA++ +L ++FV R E Y N+R P + FGT +D RRD TIN+L I
Sbjct: 79 ------TASLLYKNLQLEFVATRKEQYFPNNRYPKVEFGTLVDDVLRRDFTINALLMAIT 132
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + DL +G+ DL+ G I T P +F +DPLR+LRA++F RF+F ++E+ KA
Sbjct: 133 TGEILDLCQKGLNDLQQGIIRTVKDPNLSFTEDPLRMLRALQFAMRFNFSIEEKTFKAMR 192
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPL 325
K A A KI R + +Q KA I L W + LPL
Sbjct: 193 ----KNAPALKILSHRAIQNELQKIPESQKSKAKQLIANLG--WEII-LPL 236
>gi|344201677|ref|YP_004786820.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Muricauda ruestringensis DSM 13258]
gi|343953599|gb|AEM69398.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Muricauda ruestringensis DSM 13258]
Length = 476
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 110/210 (52%), Gaps = 19/210 (9%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD L ++ DIDI G E A KVA L G+ S F
Sbjct: 31 VIGGFVRDYFLKRNTPKDIDIVAIGS-GIELAKKVASKLK--GKPEISVF---------- 77
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K+ TA +K DL ++FV R E Y+ +SR P + GT E+D RRD TIN++ +N
Sbjct: 78 KNFGTAMIKHKDLELEFVGARKESYNRDSRKPIVEDGTLEDDQNRRDFTINAMALTLNQE 137
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ L G+ADL I TPL P T+ DDPLR++RAIRF + F + EL+ A
Sbjct: 138 NFGKLLDPFGGLADLDKEIIRTPLEPGITYSDDPLRMMRAIRFATQLHFTI--ELQSLQA 195
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
E K + +S+ER+ E+ ++ ++P
Sbjct: 196 ITENKDRIKI-VSKERIVDELHKILMSSKP 224
>gi|281423703|ref|ZP_06254616.1| polyA polymerase family protein [Prevotella oris F0302]
gi|281402255|gb|EFB33086.1| polyA polymerase family protein [Prevotella oris F0302]
Length = 483
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQS 156
V GG+VRD L + DID+ + G + A+++ L + FG
Sbjct: 34 VVGGYVRDLFLERPSNDIDVVVVGS-GIQVASELKNRLGRRAHLSVFRNFG--------- 83
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA +K + I+FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 84 ----TAQVKYGGMEIEFVGARKESYSHDSRKPHVEDGTLEDDQNRRDFTINALAVCLNKE 139
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
L G+ D++ G I TPL P TF DDPLR++R IRF + +F +++E +A
Sbjct: 140 HFGQLVDPFDGVYDMEDGIIRTPLDPDITFSDDPLRMMRCIRFATQLNFFIEDETFEALQ 199
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
+ + + IS ER+ E++ ++ P K + CGL
Sbjct: 200 RNAERIKI---ISGERIDEELNKIMLTQTPSKGFIDLYRCGL 238
>gi|288927029|ref|ZP_06420922.1| polyA polymerase family protein [Prevotella buccae D17]
gi|402308692|ref|ZP_10827696.1| HDIG domain protein [Prevotella sp. MSX73]
gi|288336203|gb|EFC74591.1| polyA polymerase family protein [Prevotella buccae D17]
gi|400375143|gb|EJP28053.1| HDIG domain protein [Prevotella sp. MSX73]
Length = 488
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 121/240 (50%), Gaps = 24/240 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT-GETAP-SGFGVIPSNPDQ 155
V GG+VRD L + DID+ + +GS +VA+ L G A S F
Sbjct: 34 VVGGYVRDLFLERPSGDIDVVV---VGS--GIQVADALKKQLGRKAHISVF--------- 79
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
++ TA +K L ++FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 80 -RNFGTAQVKYKGLEVEFVGARKESYSHDSRKPVVENGTLEDDQNRRDFTINALAVCLNG 138
Query: 216 SSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
L GI DL+ G I TPL P TF DDPLR++R +RF + +F ++ A
Sbjct: 139 DRFGQLVDPFDGIRDLEEGIIATPLDPDITFSDDPLRMMRCVRFATQLNFDIEPATYDAL 198
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
+ + + + IS ER+ E++ ++ P K ++ L +++ LP + +++E
Sbjct: 199 SRNARRLKI---ISGERIADEMNKIMLAPHPSKGFYYLHETGLLYLI--LPELCQLDIVE 253
>gi|399023531|ref|ZP_10725590.1| putative domain HDIG-containing protein [Chryseobacterium sp.
CF314]
gi|398082833|gb|EJL73574.1| putative domain HDIG-containing protein [Chryseobacterium sp.
CF314]
Length = 472
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 111/208 (53%), Gaps = 20/208 (9%)
Query: 98 VAGGWVRDKLLG-KDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
+ GG+VRD L+ K DID + G E A VA L E S F
Sbjct: 30 IVGGYVRDLLMKRKASTDIDFVTEQS-GIELARNVA--LEIDPELKVSVF---------- 76
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K TA ++ DL ++FV R E Y+ENSR P + GT E+D RRD TIN++ ++N
Sbjct: 77 KTYGTAMVRYKDLELEFVGARKESYNENSRKPDVEGGTLEDDQKRRDFTINAMAISLNKD 136
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ +L G+ DL++ + TPL P T+ DDPLR++RAIRF + F +++ + A
Sbjct: 137 NFGELIDPFNGVEDLENKILRTPLEPAQTYSDDPLRMMRAIRFASTLQFTIED---NSLA 193
Query: 275 SDEVKAALAAKISRERVGTEID-LMVSG 301
+ + +A +S ERV E + +M+SG
Sbjct: 194 AIKQEAERIKIVSMERVMVEFNKIMLSG 221
>gi|299141232|ref|ZP_07034369.1| polyA polymerase family protein [Prevotella oris C735]
gi|298577192|gb|EFI49061.1| polyA polymerase family protein [Prevotella oris C735]
Length = 483
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQS 156
V GG+VRD L + DID+ + G + A+++ L + FG
Sbjct: 34 VVGGYVRDLFLERPSNDIDVVVVGS-GIQVASELKNRLGRRAHLSVFRNFG--------- 83
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA +K + I+FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 84 ----TAQVKYGGMEIEFVGARKESYSHDSRKPHVEDGTLEDDQNRRDFTINALAVCLNKE 139
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
L G+ D++ G I TPL P TF DDPLR++R IRF + +F +++E +A
Sbjct: 140 HFGQLVDPFDGVYDMEDGIIRTPLDPDITFSDDPLRMMRCIRFATQLNFFIEDETFEALQ 199
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
+ + + IS ER+ E++ ++ P K + CGL
Sbjct: 200 RNAERIKI---ISGERIDDELNKIMLTQTPSKGFIDLYRCGL 238
>gi|315606302|ref|ZP_07881318.1| polyA polymerase family protein [Prevotella buccae ATCC 33574]
gi|315251993|gb|EFU31966.1| polyA polymerase family protein [Prevotella buccae ATCC 33574]
Length = 488
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 121/240 (50%), Gaps = 24/240 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT-GETAP-SGFGVIPSNPDQ 155
V GG+VRD L + DID+ + +GS +VA+ L G A S F
Sbjct: 34 VVGGYVRDLFLERPSGDIDVVV---VGS--GIQVADALKKQLGRKAHISVF--------- 79
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
++ TA +K L ++FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 80 -RNFGTAQVKYKGLEVEFVGARKESYSHDSRKPVVENGTLEDDQNRRDFTINALAVCLNG 138
Query: 216 SSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
L GI DL+ G I TPL P TF DDPLR++R +RF + +F ++ A
Sbjct: 139 DRFGQLVDPFDGIRDLEEGIIATPLDPDITFSDDPLRMMRCVRFATQLNFDIEPATYDAL 198
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
+ + + + +S ER+ E++ ++ P K ++ L +++ LP + +++E
Sbjct: 199 SRNARRLKI---VSGERIADEMNKIMLAPHPSKGFYYLHETGLLYLI--LPELCQLDIVE 253
>gi|281422478|ref|ZP_06253477.1| polyA polymerase family protein [Prevotella copri DSM 18205]
gi|281403461|gb|EFB34141.1| polyA polymerase family protein [Prevotella copri DSM 18205]
Length = 480
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 20/210 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQS 156
V GG+VRD L + DID+ + G E A+ + + L + FG
Sbjct: 34 VVGGYVRDLFLERPSNDIDVVVVGS-GIEVASALKKMLGRKAHLSVFRNFG--------- 83
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA +K D ++FV R E Y +SR P + GT E+D RRD TIN++ +N
Sbjct: 84 ----TAQVKYQDTEVEFVGARKESYQHDSRKPIVEDGTLEDDQNRRDFTINAMAICLNKD 139
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L G+ D++ G I TPL P TF DDPLR++R +RF + +F ++EE A +
Sbjct: 140 RFGELVDPFDGVYDMEDGIIATPLDPDITFSDDPLRMMRCVRFATQLNFQIEEETYDALS 199
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ + + IS ER+ E++ ++ P
Sbjct: 200 RNAERLKI---ISAERICDEMNKIMLSKHP 226
>gi|85816744|gb|EAQ37930.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Dokdonia
donghaensis MED134]
Length = 471
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 116/234 (49%), Gaps = 25/234 (10%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLSA 137
IF+ + LET V GG+VRD +L + + DID+ G + A KV+E L
Sbjct: 11 IFNTISRAADDLQLETY--VIGGFVRDYILKRGEVKDIDVVAVGS-GIKLARKVSELL-- 65
Query: 138 TGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
P+ P K TA ++ + ++FV R E YS++SR P + GT
Sbjct: 66 ------------PNKPKVQVFKTYGTAMLRSNQIDVEFVGARKESYSKDSRNPVVEDGTL 113
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
+D RRD TIN+L +N DL GI+DL I TPL P T+ DDPLR++R
Sbjct: 114 ADDQNRRDFTINALAIRLNDEGYGDLIDPFGGISDLDRKIIRTPLDPDITYSDDPLRMMR 173
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
AIRF + DF+++ +K+ S A I+ ER+ E++ ++ P K
Sbjct: 174 AIRFATQLDFMIE---RKSVESITRNAERIKIITNERIVDELNKIMLSPVPSKG 224
>gi|340348937|ref|ZP_08671962.1| polyA polymerase family protein [Prevotella nigrescens ATCC 33563]
gi|339612798|gb|EGQ17598.1| polyA polymerase family protein [Prevotella nigrescens ATCC 33563]
Length = 474
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 128/272 (47%), Gaps = 30/272 (11%)
Query: 71 ELTDTE------TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMG 124
+LTD E IF + + LE V GG+VRD L + DID+ +
Sbjct: 3 DLTDAELAKLIDKDIFHKISDAADKLGLECY--VVGGYVRDLFLERPSNDIDVV----VV 56
Query: 125 SEFATKVAEYLSATGETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
+ E G+ A S F ++ TA +K + ++FV R E YS
Sbjct: 57 GSGISVANELKKTIGKRAHISVF----------QNFGTAQVKFGGMEVEFVGARKESYSH 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN++ +N S +L G+ DL G I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINAMAVCLNKSRFGELVDPFGGVDDLWDGIIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R +RF + DF +++E +A E A +S ER+ E++ +++
Sbjct: 167 ITFSDDPLRMMRCVRFATQLDFFIEDETFEAL---EHNANRIKIVSGERIADELNKIMAT 223
Query: 302 NQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
P K + L I+ LP V +V+E
Sbjct: 224 RTPSKGFIDLYRCGLLQII--LPELVAMDVVE 253
>gi|402846305|ref|ZP_10894618.1| HDIG domain protein [Porphyromonas sp. oral taxon 279 str. F0450]
gi|402268006|gb|EJU17393.1| HDIG domain protein [Porphyromonas sp. oral taxon 279 str. F0450]
Length = 491
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 118/239 (49%), Gaps = 27/239 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSNPDQS 156
+ GG+VRD LL + DID+ + G + A VA L + + FG
Sbjct: 39 IVGGYVRDLLLYRPSKDIDV-VSIGRGIDLAQAVARRLGRGAHISVFARFG--------- 88
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA +K DL I+FV R E Y+ +SR P + GT EED RRD T+N+L +N
Sbjct: 89 ----TAQVKQGDLEIEFVGARRESYTPDSRKPFVEDGTLEEDQERRDFTVNALAICLNAD 144
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
L G+ D++ + TPL P TF DDPLR++RAIRF ++ F +D + A
Sbjct: 145 RFGQLVDPFDGLHDMEALTLRTPLDPDITFSDDPLRMMRAIRFASQLGFFIDPDTFAAIG 204
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
+ + + IS ER+ TE + ++ +P GL LF + L + PE+LE
Sbjct: 205 RNAGRIEI---ISAERIATEFNKILLSPRPS------IGLELFEKTGLMKL-IFPELLE 253
>gi|343085732|ref|YP_004775027.1| polynucleotide adenylyltransferase [Cyclobacterium marinum DSM 745]
gi|342354266|gb|AEL26796.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Cyclobacterium marinum DSM 745]
Length = 474
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 118/230 (51%), Gaps = 22/230 (9%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDID-IALDNMMGSEFATKVAEYLS 136
K F + + +ET V GG+VRD LL + C D+D + + + G + A VA+ L
Sbjct: 11 KTFKKVGQVADNLGMETY--VVGGFVRDILLKRPCKDLDFVCIGD--GIKLAKAVADALE 66
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
G+ S F K+ TA +K+ + ++FV R E Y +SR P + GT
Sbjct: 67 --GKPQISIF----------KNFGTAMIKMDEWELEFVGARKESYQNHSRKPKVEAGTLA 114
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
ED RRD TIN+L +N ++ +L G+ DLK I TP P TF DDPLR++RA
Sbjct: 115 EDQERRDFTINALGIGLNANNFGELLDPYDGVKDLKRKIIRTPTDPDITFSDDPLRMMRA 174
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
IRF A+ F ++ ++ + ++ IS ER E++ ++ ++P
Sbjct: 175 IRFAAQLKFDIEANTFDGIINNAHRMSI---ISGERTIVELNKIIMTDKP 221
>gi|372223696|ref|ZP_09502117.1| tRNA nucleotidyltransferase [Mesoflavibacter zeaxanthinifaciens
S86]
Length = 475
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 114/229 (49%), Gaps = 21/229 (9%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKD-CYDIDIALDNMMGSEFATKVAEYLSA 137
+F + N LE V GG+VRD L + DID+ G A +VA+ L
Sbjct: 14 VFKSIGNAADELGLEAY--VIGGYVRDYFLKRGTAKDIDVVAVGS-GITLAKEVAKVLEG 70
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
+ S+ K+ TA + + I+FV R E Y+ +SR P + GT +E
Sbjct: 71 S------------SDVKVFKNFGTAMLTYKGMEIEFVGARKESYNRDSRKPIVEDGTLQE 118
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
D RRD TIN+L +N + + +G+ADL+ G + TPL P T+ DDPLR++RAI
Sbjct: 119 DQDRRDFTINALALGLNAHNFGIVLDPFKGLADLQKGILRTPLEPGITYSDDPLRMMRAI 178
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
R + +F + EL A +E K + IS ER+ E+ +++ QP
Sbjct: 179 RLATQLNFEI--ELSSLKAINEHKERIEI-ISNERIVDELHKILNSKQP 224
>gi|325280081|ref|YP_004252623.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Odoribacter splanchnicus DSM 20712]
gi|324311890|gb|ADY32443.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Odoribacter splanchnicus DSM 20712]
Length = 467
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 109/226 (48%), Gaps = 19/226 (8%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LL + DIDI + G E A A L + FG
Sbjct: 26 VIGGYVRDLLLQRPSQDIDIVVHGS-GIELAETAARRLGNLRVSVFKNFG---------- 74
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
TA + + I+FV R E Y NSR P + GT ++D RRD TIN+L ++N +
Sbjct: 75 ---TAMFRYKGMEIEFVGARKESYRANSRKPIVEEGTIDDDQKRRDFTINALAISLNQEN 131
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
L G+ L+ I TPL P TF DDPLR++RAIRF ++ +F ++E +A A
Sbjct: 132 YGVLIDPFGGLQHLEERLIKTPLEPGLTFSDDPLRMMRAIRFASQLNFQIEENTFQAIAE 191
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ + +S ER+ E + ++ +P + + + L I F
Sbjct: 192 YRHRLPI---VSMERIMDEFNKIMLSPEPSRGIRLLDEAGLLEIFF 234
>gi|393789387|ref|ZP_10377509.1| hypothetical protein HMPREF1068_03789 [Bacteroides nordii
CL02T12C05]
gi|392651473|gb|EIY45136.1| hypothetical protein HMPREF1068_03789 [Bacteroides nordii
CL02T12C05]
Length = 477
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 122/260 (46%), Gaps = 26/260 (10%)
Query: 70 IELTDTE------TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMM 123
IELT E KIF + T LE V GG+VRD L + D+D+ +
Sbjct: 2 IELTQEELKQRFNDKIFGQISETADALGLECY--VVGGYVRDIFLERPSKDVDVVVVGS- 58
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
G E A + ++L A K+ TA +K + ++FV R E Y
Sbjct: 59 GIEMAQALGKHLGKGAHVA------------LFKNFGTAQVKYHGTEVEFVGARKESYQR 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN+L +N + +L GI DLK I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINALAVCLNKARFGELVDPFGGINDLKEKVIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R IRF + F +D+ ++ + + + ISRER+ E++ ++
Sbjct: 167 ITFSDDPLRMMRCIRFATQLGFYIDDNTFESLCRNCERIKI---ISRERIADELNKIILS 223
Query: 302 NQPVKAMTHICGLTLFWIVF 321
P K + L ++F
Sbjct: 224 PVPSKGFIDLERSGLLPLIF 243
>gi|340618871|ref|YP_004737324.1| multifunctional CCA protein [Zobellia galactanivorans]
gi|339733668|emb|CAZ97045.1| Multifunctional CCA protein [Zobellia galactanivorans]
Length = 474
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 142/280 (50%), Gaps = 28/280 (10%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LL + DIDI G + A KVA L G+ S F
Sbjct: 31 VIGGFVRDYLLQRGTPKDIDIVAVGS-GIDLARKVASLLE--GKPKVSVF---------- 77
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K+ TA ++ ++ ++FV R E Y +SR P + G+ +D RRD TIN+L ++N +
Sbjct: 78 KNFGTAMLRHGEIELEFVGARKESYHRDSRKPVVEDGSLADDQNRRDFTINALALSLNPT 137
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L G+ADL I TPL P T+ DDPLR++RAIRF + +F +++ +A
Sbjct: 138 DFGELLDPFNGLADLDKNIIRTPLAPGITYSDDPLRMMRAIRFATQLNFKIEDNSLQAIT 197
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HICGLTLFWIVFKLPLQVEPEVL 332
++ + + IS+ER+ E++ +++ ++P + H GL + + LP V + +
Sbjct: 198 VNKERIKI---ISKERIVDELNKILASSKPSIGFSLLHKTGL----LPYILPELVALQGI 250
Query: 333 EGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALF 372
E E+ + D W +++ + D L ++AAL
Sbjct: 251 E--EIEGQRHKDNFWHTLEVVDNIAITTDNLWL-RWAALL 287
>gi|89890534|ref|ZP_01202044.1| polyA polymerase [Flavobacteria bacterium BBFL7]
gi|89517449|gb|EAS20106.1| polyA polymerase [Flavobacteria bacterium BBFL7]
Length = 477
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 19/210 (9%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD L + DIDI G E A KVA L + T S F
Sbjct: 31 VIGGFVRDYFLKRGAKQDIDIVAVGS-GIELAQKVAALLPQS--TKVSVF---------- 77
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K TA +K D ++FV R E Y+ +SR P + GT E+D RRD TIN++ +++++
Sbjct: 78 KTYGTAMVKTDDFELEFVGARKESYTRDSRNPIVEDGTLEDDQNRRDFTINAMAFSLSSQ 137
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ L G+ DL+ I TPL P T+ DDPLR++RAIRF A+ +F +++ +
Sbjct: 138 NYGQLVDPFNGMVDLEKKIIKTPLEPNVTYSDDPLRMMRAIRFAAQLNFRIED---TSFH 194
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
S + A+ I+ ER+ TE++ ++ ++P
Sbjct: 195 SIKNNASRIKIITNERIITELNKIMMCDEP 224
>gi|404486757|ref|ZP_11021946.1| hypothetical protein HMPREF9448_02392 [Barnesiella intestinihominis
YIT 11860]
gi|404336014|gb|EJZ62478.1| hypothetical protein HMPREF9448_02392 [Barnesiella intestinihominis
YIT 11860]
Length = 481
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 119/247 (48%), Gaps = 31/247 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGS--EFATKVAEYLSATGETAP-SGFGVIPSN-P 153
V GG+VRD L + DIDI +GS E A V L + FG
Sbjct: 33 VIGGYVRDIFLDRPSKDIDIV---TLGSGIELAEAVTTKLGKRAHLSTFRNFGTAQVKYS 89
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNI 213
DQ +++E I+FV R E YS +SR P + G+ ++D RRD TIN+L +
Sbjct: 90 DQKENIE----------IEFVGARKESYSHDSRKPIVEDGSLQDDQNRRDFTINALALCL 139
Query: 214 NTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
N L G+ DLK G I TPL P TF DDPLR++RAIRF + +F +++E
Sbjct: 140 NKEHWGMLVDPFDGMNDLKKGIIRTPLDPDITFSDDPLRMMRAIRFATQLNFHIEKETFA 199
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEV 331
A + + + IS+ER+ E+ ++ + P + + L I+F PEV
Sbjct: 200 AIERNRKRIEI---ISKERIIDELGKIIRSDIPSRGFILLDDCKLLPIIF-------PEV 249
Query: 332 --LEGCE 336
L+G E
Sbjct: 250 AALKGTE 256
>gi|429726947|ref|ZP_19261731.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Prevotella sp. oral taxon 473 str. F0040]
gi|429145251|gb|EKX88344.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Prevotella sp. oral taxon 473 str. F0040]
Length = 537
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 121/241 (50%), Gaps = 14/241 (5%)
Query: 80 FSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG 139
F L T+ LE + GG+VRD +LG+ D+D+ + G E A + L
Sbjct: 19 FQKLSATVDAMGLEAY--IVGGYVRDFILGRPSKDVDVVVVGS-GIEVAQAFCKQLGKGA 75
Query: 140 ETAPSGFGVIPSNPDQSKHLETATMKL--YDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
S F + + +H T K + I+FV R E YS +SR P + GT ++
Sbjct: 76 HC--SVFRNFGTAQVKWRHWTTIAGKRVHQEEEIEFVGARKESYSHDSRKPIVENGTLDD 133
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
D RRD TIN+L +N + +L G+ DL+ G I TPL P TF DDPLR++R I
Sbjct: 134 DQRRRDFTINALAVCLNQERLGELVDPFGGLRDLEDGIIATPLDPDITFSDDPLRMMRCI 193
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HICG 313
RF + +F ++EE +A + ++ + + IS ERV E++ ++ P K H CG
Sbjct: 194 RFATQLNFQIEEETFEALSRNKERIKI---ISAERVIDELNKIILAEHPSKGFIELHRCG 250
Query: 314 L 314
L
Sbjct: 251 L 251
>gi|303237316|ref|ZP_07323886.1| HDIG domain protein [Prevotella disiens FB035-09AN]
gi|302482703|gb|EFL45728.1| HDIG domain protein [Prevotella disiens FB035-09AN]
Length = 474
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 128/272 (47%), Gaps = 30/272 (11%)
Query: 71 ELTDTE------TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMG 124
+LTD E IF + + LE V GG+VRD L + DID+ + G
Sbjct: 3 DLTDAELAKFIDKDIFHKISDAADKLGLECY--VVGGYVRDLFLERPSNDIDVVV-VGSG 59
Query: 125 SEFATKVAEYLSATGETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
A ++ + L + FG TA +KL + ++FV R E YS
Sbjct: 60 ISVANELKKTLGKRAHISVFHNFG-------------TAQVKLRGMEVEFVGARKESYSH 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN++ +N +L G+ DL G I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINAMAVCLNKEHFGELVDPFGGVDDLWDGIIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R +RF + +F +++E +A E A +S ER+ E++ +++
Sbjct: 167 ITFSDDPLRMMRCVRFATQLNFFIEDETFEAL---ERNAERIKIVSGERIADELNKIMAT 223
Query: 302 NQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
P K + L I+ LP V +V+E
Sbjct: 224 KTPSKGFIDLYRCGLLQII--LPELVAMDVVE 253
>gi|110638922|ref|YP_679131.1| tRNA adenylyltransferase [Cytophaga hutchinsonii ATCC 33406]
gi|110281603|gb|ABG59789.1| tRNA adenylyltransferase (tRNA nucleotidyl transferase) [Cytophaga
hutchinsonii ATCC 33406]
Length = 479
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 20/210 (9%)
Query: 98 VAGGWVRDKLLGKDCYDID-IALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
+ GG+VRD ++ +D DID + L + G E A KVA + GE
Sbjct: 33 IVGGYVRDLIMDRDNKDIDFVCLGS--GIELAQKVA---ANMGEHVQVHI---------F 78
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K TA + D ++FV R E Y NSR PT+ GT E+D RRD TIN+L +N +
Sbjct: 79 KTFGTAMINAGDTELEFVGARKESYDFNSRKPTVESGTLEDDQLRRDFTINALAICLNKA 138
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L G++D+K I TP TF DDPLR++RA+RF + +F ++ +A A
Sbjct: 139 RFGELVDPFDGVSDIKRKIIKTPQDALLTFSDDPLRMIRAVRFATQLNFDIEAATFQAIA 198
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+++ + ++ +S ER+ E++ ++S P
Sbjct: 199 TNKDRLSI---VSMERISQELNKIISAPVP 225
>gi|300726837|ref|ZP_07060267.1| polyA polymerase family protein [Prevotella bryantii B14]
gi|299775950|gb|EFI72530.1| polyA polymerase family protein [Prevotella bryantii B14]
Length = 488
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 117/228 (51%), Gaps = 22/228 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL-SATGETAP-SGFGVIPSNPDQ 155
V GG+VRD L + DID+ + +GS A VAE L G+ A S F
Sbjct: 34 VVGGYVRDLFLERPSNDIDVVV---VGSGIA--VAEKLRQELGKKAHISVF--------- 79
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
K+ TA +K + ++FV R E YS +SR P + GT ++D RRD TIN+L +N
Sbjct: 80 -KNFGTAQVKYKGMEVEFVGARKESYSHDSRKPIVENGTLDDDQNRRDFTINALAVCLNK 138
Query: 216 SSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+L G+ D++ G I TPL P TF DDPLR++R IRF + +F +++ +A
Sbjct: 139 ERFGELVDPFDGLLDMEDGIIATPLDPDVTFSDDPLRMMRCIRFATQLNFQIEDVTYEAL 198
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ + + + IS ER+ E++ ++ P + ++ L ++
Sbjct: 199 SRNADRLKI---ISAERIADELNKIMLSPHPSVGLYYLHETGLLKLII 243
>gi|313886460|ref|ZP_07820176.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Porphyromonas asaccharolytica PR426713P-I]
gi|332300372|ref|YP_004442293.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Porphyromonas asaccharolytica DSM 20707]
gi|312924006|gb|EFR34799.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Porphyromonas asaccharolytica PR426713P-I]
gi|332177435|gb|AEE13125.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Porphyromonas asaccharolytica DSM 20707]
Length = 488
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 128/267 (47%), Gaps = 39/267 (14%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDI-------ALDNMMGSEFATKV 131
+F+ + +LET V GGWVRD L + DIDI AL + E K
Sbjct: 19 VFALVGRVADTLDLETY--VVGGWVRDLFLQRPSDDIDIVCVGSGIALAKAVAREIGPKC 76
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
+L A FG TA ++ + ++FV R E Y +SR P +
Sbjct: 77 QVHLFAN-------FG-------------TAQLRYKGVEVEFVGARRESYQRDSRKPIVE 116
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPL 249
GT E+D RRD TIN++ ++N + +L G+ DL+ I TP+ P+ TF DDPL
Sbjct: 117 DGTLEDDQERRDFTINAMAISLNERTYGELVDPFYGLEDLQDYMIRTPVDPQVTFDDDPL 176
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
R++RA+RF ++ F +D+ + A + + +S ER+ E++ ++ +P ++
Sbjct: 177 RMMRAVRFASQLGFFIDDAVFDAIVKLRERIKI---VSAERIIVELNKIMLSPRPSVGLS 233
Query: 310 HICGLTLFWIVFKLPLQVEPEVLEGCE 336
+ L ++ LP E ++L G E
Sbjct: 234 LMEQTGLLELI--LP---EVQLLRGTE 255
>gi|397691268|ref|YP_006528522.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Melioribacter roseus P3M]
gi|395812760|gb|AFN75509.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Melioribacter roseus P3M]
Length = 470
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 118/240 (49%), Gaps = 30/240 (12%)
Query: 98 VAGGWVRDKLL--GKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
+ GG+VRD +L +D D + D G EFA ++A + T FG
Sbjct: 30 LVGGFVRDIILKRSRDEMDFLVVGD---GPEFAKELANQFNVGKVTIYKNFG-------- 78
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
TA + +FV R E Y+ +SR P + GT ++D RRD TIN+L ++N
Sbjct: 79 -----TAHFNYQGISFEFVGARKESYNRHSRNPEVAPGTLDDDLNRRDFTINTLALSLNK 133
Query: 216 SSVEDLTGR--GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
S +L + G+ D+++ I TPL P+ TF DDPLR++RA+RF A+ F ++E KAA
Sbjct: 134 DSFGELIDKFGGLNDIENKVIRTPLDPETTFNDDPLRIMRAVRFAAQLQFDIEENTLKAA 193
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
+ A +S+ER+ E +++ P + + + +VF PE+ E
Sbjct: 194 SQ---MAERLKIVSQERITEEFFKILAAPAPSIGLKLMYENGIMKVVF-------PEIAE 243
>gi|374600697|ref|ZP_09673699.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Myroides odoratus DSM 2801]
gi|423325693|ref|ZP_17303533.1| hypothetical protein HMPREF9716_02890 [Myroides odoratimimus CIP
103059]
gi|373912167|gb|EHQ44016.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Myroides odoratus DSM 2801]
gi|404605543|gb|EKB05129.1| hypothetical protein HMPREF9716_02890 [Myroides odoratimimus CIP
103059]
Length = 478
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 113/219 (51%), Gaps = 23/219 (10%)
Query: 91 NLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVI 149
NL+ V GG+VRD LL +D DIDI +GS A A ++
Sbjct: 26 NLQVEAYVIGGFVRDFLLQRDSKKDIDIV---AVGSGIAL------------ALEVSNLL 70
Query: 150 PSNPDQS--KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTIN 207
P++P K+ TA ++ D+ I+FV R E Y +SR P + GT E+D RRD TIN
Sbjct: 71 PNHPKVQVFKNYGTAMLRYDDIDIEFVGARKESYHFDSRKPVVEDGTLEDDQNRRDFTIN 130
Query: 208 SLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFIL 265
+L +++ ++ L G+ DLK+ I TPL P T+ DDPLR++RA+RF + F +
Sbjct: 131 ALAISLSAANYGQLIDPFNGVEDLKNKIIRTPLDPDITYSDDPLRMMRAVRFATQLHFTI 190
Query: 266 DEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+E + AS IS ER+ E++ ++ + P
Sbjct: 191 EE---ASLASITKNCERLEIISGERIVDELNKILEADVP 226
>gi|212551022|ref|YP_002309339.1| tRNA nucleotidyltransferase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549260|dbj|BAG83928.1| tRNA nucleotidyltransferase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 474
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ G A +VA+ L + +G
Sbjct: 33 VIGGFVRDIFLHRLSKDIDVVCVGN-GISLAKEVAKSLGSASLILFKNYG---------- 81
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
TA +K D+ I+FV R E YS R P + G+ E+D RRD TIN+L IN +
Sbjct: 82 ---TAQLKYRDIAIEFVGARKESYSWAFRNPIVEEGSLEDDIKRRDFTINTLAICINQNR 138
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ DL+ I TPL P TF DDPLR+LRAIRF ++ F ++ + ++ +
Sbjct: 139 FGELIDIFDGLTDLEECSIRTPLDPDITFSDDPLRMLRAIRFASQLGFFIESKTFESIGN 198
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ + + +SRER+ E++ ++ +P
Sbjct: 199 NCNRINI---VSRERIVDELNKIILSPRP 224
>gi|445115449|ref|ZP_21378235.1| hypothetical protein HMPREF0662_01291 [Prevotella nigrescens F0103]
gi|444840386|gb|ELX67419.1| hypothetical protein HMPREF0662_01291 [Prevotella nigrescens F0103]
Length = 474
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 128/272 (47%), Gaps = 30/272 (11%)
Query: 71 ELTDTE------TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMG 124
+LTD E IF + + LE V GG+VRD L + DID+ + G
Sbjct: 3 DLTDAELAKLIDKDIFHKISDAADKLGLECY--VVGGYVRDLFLERPSNDIDVVV-VGSG 59
Query: 125 SEFATKVAEYLSATGETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
A ++ + + + FG TA +K + ++FV R E YS
Sbjct: 60 ISVANELKKIIGKRAHISVFQNFG-------------TAQVKFGGMEVEFVGARKESYSH 106
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPK 241
+SR P + GT E+D RRD TIN++ +N S +L G+ DL G I TPL P
Sbjct: 107 DSRKPIVEDGTLEDDQNRRDFTINAMAVCLNKSRFGELVDPFGGVDDLWDGIIRTPLDPD 166
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
TF DDPLR++R +RF + +F +++E +A E A +S ER+ E++ +++
Sbjct: 167 ITFSDDPLRMMRCVRFATQLNFFIEDETFEAL---ERNADRIKIVSGERIADELNKIMAT 223
Query: 302 NQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
P K + L I+ LP V +V+E
Sbjct: 224 RTPSKGFIDLYRCGLLQII--LPELVAMDVVE 253
>gi|328847700|gb|EGF97062.1| hypothetical protein MELLADRAFT_114625 [Melampsora larici-populina
98AG31]
Length = 268
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 70/106 (66%), Gaps = 8/106 (7%)
Query: 181 YSENSRIPTM--RF------GTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHG 232
Y + +R P + RF GT +EDA R D+TIN LFYN++ +ED T G+ DLK+G
Sbjct: 12 YPQVTRFPNINPRFLEKRGIGTPKEDAMRCDITINELFYNMHNDQIEDQTELGLEDLKNG 71
Query: 233 KIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEV 278
I TPLP TF DDPLR+L IRF +RF F LD+++ +AA SD++
Sbjct: 72 LIRTPLPALETFKDDPLRLLSCIRFSSRFGFQLDDQIIQAAQSDQI 117
>gi|300776646|ref|ZP_07086504.1| tRNA nucleotidyltransferase [Chryseobacterium gleum ATCC 35910]
gi|300502156|gb|EFK33296.1| tRNA nucleotidyltransferase [Chryseobacterium gleum ATCC 35910]
Length = 472
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 140/281 (49%), Gaps = 30/281 (10%)
Query: 98 VAGGWVRDKLLG-KDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
+ GG+VRD L+ K DID + G E A VA+ + + S F
Sbjct: 30 IVGGYVRDLLMNRKASTDIDFVTEQS-GIELAQNVAQDIDP--KLKVSVF---------- 76
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K TA +K +L ++FV R E Y+ENSR P + G+ E+D RRD TIN++ ++N +
Sbjct: 77 KTYGTAMIKYKELDLEFVGARKESYTENSRKPEVEGGSLEDDQKRRDFTINAMAISLNKN 136
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ +L GI DL+ + TPL P T+ DDPLR++RA+RF + F ++E KA
Sbjct: 137 NFGELIDPFNGIDDLEKEILRTPLEPAQTYSDDPLRMMRAVRFASTLHFKIEENSLKAIQ 196
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE- 333
+ + + +S ER+ E + ++ +P GL L L L + PE++E
Sbjct: 197 QEAERIRI---VSMERIMVEFNKIMLSEKPS------VGLRLMEQTGLLKLII-PELIEL 246
Query: 334 -GC-EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALF 372
G E+ + D + +++ + + N D L ++AAL
Sbjct: 247 KGVEEVEGQTHKDNFYHTLEVVDNISVNTDNLWL-RWAALL 286
>gi|399928097|ref|ZP_10785455.1| tRNA nucleotidyltransferase [Myroides injenensis M09-0166]
Length = 478
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 23/215 (10%)
Query: 98 VAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LL +D DIDI +GS ++A ++S+ ++P+ P
Sbjct: 32 VIGGFVRDFLLKRDTKKDIDIV---AIGS--GIELALHVSS----------LLPNQPKVQ 76
Query: 157 --KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
K+ TA ++ D+ I+FV R E Y +SR P + GT ++D RRD TIN+L ++N
Sbjct: 77 VFKNYGTAMLRYDDIDIEFVGARKESYHFDSRKPVVEDGTLQDDQNRRDFTINALALSLN 136
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ L G+ DL++ I TPL P T+ DDPLR++RAIRF + DF +++E +A
Sbjct: 137 KENYGALLDPFNGVEDLENKIIRTPLNPDITYSDDPLRMMRAIRFATQLDFRIEDESLEA 196
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
+ + + IS ER+ E++ ++ P K
Sbjct: 197 ITRNHSRLDI---ISGERIVDELNKILLTPVPSKG 228
>gi|410099981|ref|ZP_11294946.1| hypothetical protein HMPREF1076_04124 [Parabacteroides goldsteinii
CL02T12C30]
gi|409216536|gb|EKN09520.1| hypothetical protein HMPREF1076_04124 [Parabacteroides goldsteinii
CL02T12C30]
Length = 477
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 114/226 (50%), Gaps = 18/226 (7%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ G E A VA L +T S F K
Sbjct: 33 VIGGYVRDIFLYRPSKDIDVVAVGS-GIELAKAVAGKLGK--KTHLSVF----------K 79
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA +K DL I+FV R E Y+ +SR P + GT E+D RRD TIN+L +N
Sbjct: 80 NFGTAQVKSGDLEIEFVGARKESYNRDSRKPIVEDGTLEDDQNRRDFTINALALCLNKER 139
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ D+ + I TPL P TF DDPLR++RA+RF ++ F + + A
Sbjct: 140 YGELVDPFGGLDDMDNLIIRTPLDPDITFSDDPLRMMRAVRFASQLGFFIHPDTFDAIER 199
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
++ + ++ IS+ER+ E++ +V +P + L ++F
Sbjct: 200 NKERISI---ISKERIVDELNKIVLSPKPSIGFELLDKSGLLQLIF 242
>gi|228471468|ref|ZP_04056253.1| polyA polymerase family protein [Porphyromonas uenonis 60-3]
gi|228306736|gb|EEK15881.1| polyA polymerase family protein [Porphyromonas uenonis 60-3]
Length = 501
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 128/267 (47%), Gaps = 39/267 (14%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDI-------ALDNMMGSEFATKV 131
+F+ + +LET V GGWVRD L + DIDI AL + E K
Sbjct: 32 VFALVGRVADALDLETY--VVGGWVRDLFLQRPSSDIDIVCVGSGIALAKAVAREIGPKC 89
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
++ A FG TA ++ + ++FV R E Y +SR P +
Sbjct: 90 QVHVFAN-------FG-------------TAQLRYKGVEVEFVGARRESYQRDSRKPIVE 129
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPL 249
GT E+D RRD TIN++ ++N + +L G+ DL+ I TP+ P+ TF DDPL
Sbjct: 130 DGTLEDDQERRDFTINAMAISLNERTYGELVDPFYGLEDLQDYMIRTPVDPQVTFDDDPL 189
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
R++RA+RF ++ F +D+ + A + + +S ER+ E++ ++ +P ++
Sbjct: 190 RMMRAVRFASQLGFFIDDAVFDAIVKLRERIKI---VSAERIIVELNKIMLSPRPSVGLS 246
Query: 310 HICGLTLFWIVFKLPLQVEPEVLEGCE 336
+ L ++ LP E ++L G E
Sbjct: 247 LMEQTGLLELI--LP---EVQLLRGTE 268
>gi|225012713|ref|ZP_03703148.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Flavobacteria bacterium MS024-2A]
gi|225003246|gb|EEG41221.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Flavobacteria bacterium MS024-2A]
Length = 479
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 120/235 (51%), Gaps = 23/235 (9%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDI-ALDNMMGSEFATKVAEY 134
T +F L T+ N T+ V GG+VRD LL + DIDI ALD+ G + A V
Sbjct: 13 TPLFEVLQQTVAESN--TLGYVIGGFVRDHLLNRSHKKDIDIVALDS--GIDLAIAVQNK 68
Query: 135 LSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGT 194
L G A F K TA + + ++FV R E YS+ SR P ++ GT
Sbjct: 69 LK--GAKAVQVF----------KTYGTAMVHWNNTDLEFVGARKESYSKESRNPEVKPGT 116
Query: 195 AEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVL 252
E+D RRD TIN+L ++N L G+ DL+ G + TPL P T+ DDPLR+L
Sbjct: 117 LEDDQNRRDFTINALAISLNKDDFGLLIDPFNGLKDLEEGVLRTPLDPDITYSDDPLRML 176
Query: 253 RAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
RAIRF + DF + + + + + + + I++ER+ E++ ++ +P K
Sbjct: 177 RAIRFATQLDFTIASDSYDSISRNAERIDI---ITKERIVEELNKILMTPKPSKG 228
>gi|34540583|ref|NP_905062.1| poly(A) polymerase [Porphyromonas gingivalis W83]
gi|188994688|ref|YP_001928940.1| tRNA nucleotidyltransferase [Porphyromonas gingivalis ATCC 33277]
gi|334147704|ref|YP_004510633.1| tRNA nucleotidyltransferase [Porphyromonas gingivalis TDC60]
gi|419971436|ref|ZP_14486884.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Porphyromonas gingivalis W50]
gi|34396896|gb|AAQ65961.1| polyA polymerase family protein [Porphyromonas gingivalis W83]
gi|188594368|dbj|BAG33343.1| tRNA nucleotidyltransferase [Porphyromonas gingivalis ATCC 33277]
gi|333804860|dbj|BAK26067.1| tRNA nucleotidyltransferase [Porphyromonas gingivalis TDC60]
gi|392608601|gb|EIW91446.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Porphyromonas gingivalis W50]
Length = 483
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 122/257 (47%), Gaps = 42/257 (16%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
L+ + IF + LET V GG+VRD L + DIDI G + A V
Sbjct: 8 LSKIDIPIFRLIAEVADQLGLETY--VVGGYVRDIFLNRPSKDIDIVAVGR-GIDLAKAV 64
Query: 132 AEYLSATGETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTM 190
A+ L + + FG TA +K DL I+FV R E Y +SR P +
Sbjct: 65 AKKLGRKAHLSVFANFG-------------TAQVKHGDLEIEFVGARKESYRHDSRKPIV 111
Query: 191 RFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGR--GIADLKHGKIVTPLPPKATFLDDP 248
GT E+D RRD TIN+L +N+ DL G+ D+ + TPL P TF DDP
Sbjct: 112 EDGTLEDDLRRRDFTINALAVCLNSDRFGDLVDMFDGLCDMDDMLLCTPLDPDITFSDDP 171
Query: 249 LRVLRAIRFGARF--------DFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVS 300
LR++RAIRF ++ DF E +++ A +K A++A ERV E++ ++
Sbjct: 172 LRMMRAIRFASQLPGFTILPRDF---EAIQRNAH--RIKEAVSA----ERVIEELNKIML 222
Query: 301 GNQPVKAMTHICGLTLF 317
+P GL+LF
Sbjct: 223 SPRPS------IGLSLF 233
>gi|387133794|ref|YP_006299766.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Prevotella intermedia 17]
gi|386376642|gb|AFJ08385.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Prevotella intermedia 17]
Length = 471
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 115/242 (47%), Gaps = 28/242 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP----SGFGVIPSNP 153
V GG+VRD L + DID+ + + E G+ A FG
Sbjct: 31 VVGGYVRDLFLERPSNDIDVV----VVGSGISVANELKKTIGKRAHISVFHNFG------ 80
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNI 213
TA +K + ++FV R E YS +SR P + GT E+D RRD TIN++ +
Sbjct: 81 -------TAQVKFSGMEVEFVGARKESYSHDSRKPIVEDGTLEDDQNRRDFTINAMAVCL 133
Query: 214 NTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
N S +L G+ DL G I TPL P TF DDPLR++R +RF + +F +++E +
Sbjct: 134 NKSRFGELVDPFGGVDDLWDGIIRTPLDPDITFSDDPLRMMRCVRFATQLNFFIEDETFE 193
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEV 331
A E A +S ER+ E++ +++ P K + L I+ LP V +V
Sbjct: 194 AL---ERNADRIKIVSGERIADELNKIMATRTPSKGFIDLYRCGLLQII--LPELVAMDV 248
Query: 332 LE 333
+E
Sbjct: 249 VE 250
>gi|323344432|ref|ZP_08084657.1| polyA polymerase family protein [Prevotella oralis ATCC 33269]
gi|323094559|gb|EFZ37135.1| polyA polymerase family protein [Prevotella oralis ATCC 33269]
Length = 476
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 106/200 (53%), Gaps = 25/200 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT-GETAP-SGFGVIPSNPDQ 155
V GG+VRD L + DID+ + +GS +VA+ L G A S F
Sbjct: 34 VVGGYVRDIFLERPSNDIDVVV---VGS--GIQVADALKKLLGRRAHISVF--------- 79
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
++ TA +K + I+FV R E YS +SR P + GT E+D RRD TIN+L +N
Sbjct: 80 -RNFGTAQVKFGSMEIEFVGARKESYSHDSRKPAVENGTLEDDQNRRDFTINALAICLNK 138
Query: 216 SSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD----EEL 269
+L G+ D++ G I TPL P TF DDPLR++R +RF A+ +F ++ E L
Sbjct: 139 ERFGELIDPFGGLEDMEDGIIRTPLDPDITFSDDPLRMMRCVRFAAQLNFFIEDATFEAL 198
Query: 270 KKAAASDEVKAALAAKISRE 289
++ A D +K A +I+ E
Sbjct: 199 RRNA--DRIKIVSAERIADE 216
>gi|392391239|ref|YP_006427842.1| domain HDIG-containing protein [Ornithobacterium rhinotracheale DSM
15997]
gi|390522317|gb|AFL98048.1| putative domain HDIG-containing protein [Ornithobacterium
rhinotracheale DSM 15997]
Length = 476
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 23/204 (11%)
Query: 98 VAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LL + + DIDI + G A +VAE L P P S
Sbjct: 28 VIGGFVRDFLLKRTNKKDIDIVTEGS-GIALAKQVAEQL--------------PKKPKVS 72
Query: 157 --KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
K TA + +FV R E YSENSR P + GT ++D RRD TIN+L ++N
Sbjct: 73 VFKRFGTAMFHYHGTDYEFVGARKESYSENSRKPAVENGTIKDDQLRRDFTINALAISLN 132
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + GIADL++ I TP+ P T+ DDPLR++RAIRF + F ++ E +A
Sbjct: 133 KENYGEFIDPFDGIADLENKIIRTPVDPVLTYSDDPLRMMRAIRFATQLGFDIEPESFQA 192
Query: 273 AASDEVKAALAAKISRERVGTEID 296
+ + + +S+ER+ E +
Sbjct: 193 ICENAHRLKI---LSQERIMEEFN 213
>gi|156335502|ref|XP_001619604.1| hypothetical protein NEMVEDRAFT_v1g224026 [Nematostella vectensis]
gi|156203123|gb|EDO27504.1| predicted protein [Nematostella vectensis]
Length = 508
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 100/185 (54%), Gaps = 21/185 (11%)
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQS--KHLETATMKLYDLWIDFVNLRCEDY 181
G E A KVAE L P+ P K TA ++ D+ ++FV R E Y
Sbjct: 92 GIELAEKVAELL--------------PNKPKVQVFKTYGTAMLRYKDIEVEFVGARKESY 137
Query: 182 SENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLP 239
+E +R P + GT ++D RRD TIN+L ++N L GI DL+ I TPL
Sbjct: 138 TEETRNPEVSEGTLQDDQNRRDFTINALALSLNKKDFGLLLDPFDGINDLQSKIIRTPLE 197
Query: 240 PKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
P T+ DDPLR++RAIRF ++ +FI+++E +A + + + + I+RER+ E++ ++
Sbjct: 198 PNITYSDDPLRMMRAIRFASQLNFIIEKESLEAISKNAERLKI---ITRERIVEELNKIM 254
Query: 300 SGNQP 304
+P
Sbjct: 255 LSTKP 259
>gi|340352192|ref|ZP_08675077.1| polyA polymerase family protein [Prevotella pallens ATCC 700821]
gi|339614920|gb|EGQ19605.1| polyA polymerase family protein [Prevotella pallens ATCC 700821]
Length = 474
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 105/221 (47%), Gaps = 20/221 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L + DID+ + S + + FG
Sbjct: 34 VVGGYVRDLFLERPSNDIDVVVVGSGISVANELKKTFGKRAHISVFHNFG---------- 83
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
TA +K + ++FV R E YS +SR P + GT E+D RRD TIN++ +N S
Sbjct: 84 ---TAQVKFGGMEVEFVGARKESYSHDSRKPIVEDGTLEDDQNRRDFTINAMAVCLNKSH 140
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L GI DL G I TPL P TF DDPLR++R +RF + +F +++E A
Sbjct: 141 FGELVDPFGGIDDLWDGIIRTPLDPDITFSDDPLRMMRCVRFATQLNFFIEDETFDAL-- 198
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI--CGL 314
E A +S ER+ E++ +++ P K + CGL
Sbjct: 199 -ERNAERIKIVSGERIADELNKIMATPTPSKGFIDLYRCGL 238
>gi|333383843|ref|ZP_08475495.1| hypothetical protein HMPREF9455_03661 [Dysgonomonas gadei ATCC
BAA-286]
gi|332827244|gb|EGK00017.1| hypothetical protein HMPREF9455_03661 [Dysgonomonas gadei ATCC
BAA-286]
Length = 482
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 107/224 (47%), Gaps = 18/224 (8%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG+VRD L + DIDI G E A VA L S F K+
Sbjct: 40 GGYVRDIFLHRPSKDIDIVTVGK-GIELAQAVARTLGKKAHL--SVF----------KNF 86
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVE 219
TA +K D I+FV R E Y +SR P + GT E+D RRD TIN+L +N
Sbjct: 87 GTAQIKYKDTEIEFVGARRESYQRDSRKPVVEDGTLEDDQNRRDFTINALAVCLNKDRFG 146
Query: 220 DLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDE 277
+L G+ D++ I TPL P TF DDPLR++RAIRF ++ F ++ A ++
Sbjct: 147 ELLDPFNGLKDMEDLIIRTPLDPDITFSDDPLRMMRAIRFSSQLGFNIEPGTFDAITRNK 206
Query: 278 VKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ + IS ER+ E++ +V +P + L I+F
Sbjct: 207 DRIGI---ISGERIIDELNKIVLSPKPSVGFLQLDQTGLLAIIF 247
>gi|406024927|ref|YP_006705228.1| Multifunctional CCA protein [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
gi|404432526|emb|CCM09808.1| Multifunctional CCA protein [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
Length = 479
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 112/220 (50%), Gaps = 28/220 (12%)
Query: 90 FNLETVLRVAGGWVRDKLLGKDCYDIDIAL--DNMMGSEFATKVAEYLSATGETAPSGFG 147
+LET V GG+VRD LG+ DIDI D+++ A VA+Y + P F
Sbjct: 32 LSLETY--VVGGFVRDLFLGRVAKDIDIVCVGDSIV---LAQAVAQY-----KDVPVTF- 80
Query: 148 VIPSNPDQSKHLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTI 206
K TA ++ +D W ++F++ R E Y SR P + GT +D RRD TI
Sbjct: 81 --------FKRFGTAMLQ-WDEWALEFISARKESYVLTSRHPNVSTGTLADDQMRRDFTI 131
Query: 207 NSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFI 264
N++ ++N L G +DL HG I TP P TF DDPLR++RAIRF + F
Sbjct: 132 NTMAASLNKGDYGRLVDPFNGQSDLMHGLIRTPSNPYQTFSDDPLRIMRAIRFSTQLHFT 191
Query: 265 LDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ E A + + + A+ A+ ER+ E+ ++ ++P
Sbjct: 192 IVPETWLAMTTVQDRLAIVAQ---ERISEELHKIIMTDRP 228
>gi|423316997|ref|ZP_17294902.1| hypothetical protein HMPREF9699_01473 [Bergeyella zoohelcum ATCC
43767]
gi|405581820|gb|EKB55828.1| hypothetical protein HMPREF9699_01473 [Bergeyella zoohelcum ATCC
43767]
Length = 474
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 127/242 (52%), Gaps = 23/242 (9%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLS 136
K+F + +++ H ++V + GG+VRD ++ + DID + G E A K+++ +
Sbjct: 13 KLFKTI-SSIAHTEHQSVY-IVGGFVRDLIMKRGLPTDIDFVTEGS-GIELAQKISQKID 69
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
+ S F K+ TA + + ++FV R E YSENSR P + G+ E
Sbjct: 70 P--KIKVSVF----------KNFGTAMFRYKNAELEFVGARKESYSENSRKPAVETGSIE 117
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN++ ++N S+ +L G+ ++ ++TPL P+ T+ DDPLR++RA
Sbjct: 118 DDQKRRDFTINAMAISLNPSNFGELIDPFNGLKAIEDKLLITPLEPRQTYSDDPLRMMRA 177
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HIC 312
IRF F ++E+ +A ++ + + +S ER+ E + ++ +P + H
Sbjct: 178 IRFATILGFDIEEKSFQAIITEAERIQI---VSMERIMVEFNKIMMAKKPSIGLHLLHKA 234
Query: 313 GL 314
GL
Sbjct: 235 GL 236
>gi|374290498|ref|YP_005037551.1| tRNA nucleotidyltransferase [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
gi|358377290|gb|AEU09478.1| tRNA nucleotidyltransferase [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
Length = 475
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 24/242 (9%)
Query: 98 VAGGWVRDKLLGKD-CYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LL K+ D+DI L G + A +VA+++ T +
Sbjct: 28 VVGGYVRDFLLDKNLSQDLDI-LTIGEGIKLAKEVAKHIKPTPRI------------NIF 74
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K TA ++ + I+FV+ R E Y SR P + FGT ++D RRD TIN+L ++N +
Sbjct: 75 KRFGTAMLEFDNQKIEFVSSRKESYHFYSRNPIIDFGTLQDDQNRRDFTINALAISLNKN 134
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ L G+ DL+ + PL T+ DDPLR++RAIRF + FI+D+ K+
Sbjct: 135 NYGKLFDPFGGVLDLRKKILRNPLNSDITYSDDPLRMMRAIRFATQLQFIIDKSSFKSIQ 194
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEG 334
++ + ++ +S ER+ E + ++ N+P + + L I+ LP E +L+G
Sbjct: 195 KNKNRISI---VSIERITEEFNKILLSNRPSIGLFLLSKSGLLSII--LP---ELVLLQG 246
Query: 335 CE 336
E
Sbjct: 247 IE 248
>gi|441500205|ref|ZP_20982373.1| tRNA nucleotidyltransferase [Fulvivirga imtechensis AK7]
gi|441435990|gb|ELR69366.1| tRNA nucleotidyltransferase [Fulvivirga imtechensis AK7]
Length = 469
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 112/229 (48%), Gaps = 23/229 (10%)
Query: 79 IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT 138
IF + + NLET V GG+VRD LL + DID G A +VA+ L
Sbjct: 12 IFKVVSDAATALNLETY--VIGGFVRDLLLKRPSKDIDFVCVGS-GIALAEEVAKKLGNA 68
Query: 139 GETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEED 198
+ FG TA + D ++FV R E Y +SR P + GT E+D
Sbjct: 69 HVSVFKNFG-------------TAMVNYEDWELEFVGARKESYRYDSRKPIVENGTLEDD 115
Query: 199 AYRRDLTINSLFYNI---NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
RRD TIN+L + N + D G G+ DLK I TPL P TF DDPLR++RAI
Sbjct: 116 QNRRDFTINALAIGMVAGNFGKLIDPFG-GVKDLKRKIIKTPLGPDITFSDDPLRMMRAI 174
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
RF ++ +F ++ + + + + +S+ER+ E++ ++ +P
Sbjct: 175 RFASQLNFDIEPVTFEGIIRNVDRINI---VSQERITDELNKIILSGKP 220
>gi|145219609|ref|YP_001130318.1| metal dependent phosphohydrolase [Chlorobium phaeovibrioides DSM
265]
gi|145205773|gb|ABP36816.1| metal dependent phosphohydrolase [Chlorobium phaeovibrioides DSM
265]
Length = 470
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 110/223 (49%), Gaps = 20/223 (8%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSE--FATKVAEYLSATGETAPSGFGVIPSNPDQ 155
+ GG+VRD +L + C DIDI + +G FA ++ E L F +
Sbjct: 25 LVGGFVRDMILQRPCTDIDIMV---IGDPVPFAKQIREELHGKNFVLFERF--------R 73
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
+ LE + ++ V R E Y+ SR P GT E+D RRD T+N+L +N
Sbjct: 74 TAQLEIPGPEGVHYKLELVGARKESYNPESRKPITLTGTLEDDLARRDFTLNALALCLNR 133
Query: 216 SSVEDLTGR--GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
D+ + G+ DLK + TPL P+ TF DDPLR++RA RF A+ F EE+ +A
Sbjct: 134 QGRGDIIDQHNGLRDLKEEILRTPLDPEQTFSDDPLRMMRAARFAAQLGFTPAEEVIEAM 193
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HICGL 314
+ + + +SRER+ TE ++S +P + H GL
Sbjct: 194 ETMHKRITI---VSRERISTEFLKIMSSPRPSVGLIILHQTGL 233
>gi|402298712|ref|ZP_10818381.1| polyA polymerase family protein [Bacillus alcalophilus ATCC 27647]
gi|401726108|gb|EJS99357.1| polyA polymerase family protein [Bacillus alcalophilus ATCC 27647]
Length = 847
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 108/206 (52%), Gaps = 29/206 (14%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG+VRD LL KD DIDI ++ F K+A + + P FG
Sbjct: 480 GGFVRDLLLKKDNKDIDIVIEGD-AIAFCQKIAAIMDGHFQEHPQ-FG------------ 525
Query: 160 ETATMKL-YDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSV 218
TAT+ L ++ IDFV+ R E Y+ + +PT+ + +ED RRD TIN++ +N SS
Sbjct: 526 -TATLTLPSEIKIDFVSSRTEFYTGPAALPTVTYSNIKEDLARRDFTINAMAVKLNASSF 584
Query: 219 EDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFIL---DEELKKAA 273
+L +G DL GKI + +F++DP R+ RAIRF RF + L +EL KAA
Sbjct: 585 GELLDYFQGKEDLVKGKI--RILHTLSFIEDPTRIFRAIRFAHRFQYQLATQTKELAKAA 642
Query: 274 ASDEVKAALAAKISRERVGTEIDLMV 299
S K+S+ R+ +E+ L++
Sbjct: 643 GSS------LMKLSKTRLRSELKLII 662
>gi|404449095|ref|ZP_11014086.1| tRNA nucleotidyltransferase/poly(A) polymerase [Indibacter
alkaliphilus LW1]
gi|403765199|gb|EJZ26081.1| tRNA nucleotidyltransferase/poly(A) polymerase [Indibacter
alkaliphilus LW1]
Length = 471
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 34/268 (12%)
Query: 68 DKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEF 127
DKIE IF + LET V GG+VRD +L + DID +GS
Sbjct: 8 DKIE-------IFERVGRIADDMGLETY--VVGGYVRDLILKRPSKDIDFVC---VGS-- 53
Query: 128 ATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRI 187
+AE ++ + + +P N K+ TA ++L D I+FV R E Y SR
Sbjct: 54 GILLAEAVAKSFDHH------VPLNV--FKNFGTANIRLEDWEIEFVGARKESYQRESRK 105
Query: 188 PTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFL 245
P + GT +ED RRD TIN++ ++N ++ +L G+ DLK I TP P TF
Sbjct: 106 PIVEDGTLKEDQERRDFTINAMAISVNKNTYGELIDPFDGVKDLKRKLIRTPTNPLITFS 165
Query: 246 DDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
DDPLR++RAIRF A+ F ++ + + + + +S ER+ E++ ++ ++P
Sbjct: 166 DDPLRMMRAIRFAAQLQFDIEPDTFDGIMHEAPRLQI---VSAERIIDELNKIILTDKPS 222
Query: 306 KAMTHICGLTLFWIVFKLPLQVEPEVLE 333
G L + V L Q PE++E
Sbjct: 223 ------YGFKLLF-VSNLLHQFFPEMVE 243
>gi|193212873|ref|YP_001998826.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Chlorobaculum parvum NCIB 8327]
gi|193086350|gb|ACF11626.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Chlorobaculum parvum NCIB 8327]
Length = 475
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 108/226 (47%), Gaps = 26/226 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSE--FATKVAEYLSATGETAPSGFGVIPSNPDQ 155
+ GG+VRD ++ + C DIDI + +G FA +AE L F D
Sbjct: 29 LVGGYVRDLIMQRPCTDIDIMV---IGEPVPFAKAIAEQLGGRNFVLFERFRTAQIELDD 85
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
E T KL + V R E Y+ SR P GT E+D RRD TIN+L +N
Sbjct: 86 P---EAGTFKL-----EIVGARKESYNPESRKPITSIGTLEDDLSRRDFTINALALRLNR 137
Query: 216 SSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+L G ++ + TPL P+ TF DDPLR++RA RF + DF LDE
Sbjct: 138 EQRGELVDLYDGQRHIREKLLKTPLDPEQTFSDDPLRMMRAARFACQLDFRLDE------ 191
Query: 274 ASDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAMT--HICGL 314
A+ E A++++I SRERV E +++ +P + H GL
Sbjct: 192 ATLEAMEAMSSRIQIVSRERVSHEFLKIMAAPKPSIGLKILHSTGL 237
>gi|189346518|ref|YP_001943047.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Chlorobium limicola DSM 245]
gi|189340665|gb|ACD90068.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Chlorobium limicola DSM 245]
Length = 471
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 145/325 (44%), Gaps = 56/325 (17%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG+VRD L+ + C DIDI + GE P F I N + K
Sbjct: 29 LVGGYVRDILIERPCTDIDIMI------------------VGE--PVAFARIIRNELRGK 68
Query: 158 HL------ETATMKLYD-----LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTI 206
+ TA ++L D L I+ V R E Y +SR P GT E+D RRD TI
Sbjct: 69 NFVVFERFRTAQLELTDEHAGALKIEVVGARKESYDLDSRKPFTEIGTIEDDLSRRDFTI 128
Query: 207 NSLFYNINTSSVEDLTGR--GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFI 264
N+L ++N+ LT G+ DL+ + TPL P+ TF DDPLR++RA RF ++ F
Sbjct: 129 NALAVSLNSDKRGSLTDNYNGLGDLERRILRTPLEPEQTFSDDPLRMMRAARFVSQLGFT 188
Query: 265 LDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
D L +A + + + +SRER+ E ++ +P + GL + + K+
Sbjct: 189 PDPALAEAMKAMHERIRI---VSRERISQEFFKIMLSPEPSR------GLEMLYDT-KIL 238
Query: 325 LQVEPEV--LEGCEMF-CTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAAL---------- 371
+ PEV + G E + D + Q++ + + + D+ L A L
Sbjct: 239 GDILPEVTAMAGIEQVDGLGHKDTLFHTFQVVDNLSRHSDKLWLRIAALLHDIAKPVTKR 298
Query: 372 FLPFRNTTYKDNKGKKIPVVNYTFR 396
F P T+ ++ I VV FR
Sbjct: 299 FHPSTGWTFHGHEAVGIKVVAKIFR 323
>gi|298372295|ref|ZP_06982285.1| polyA polymerase family protein [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275199|gb|EFI16750.1| polyA polymerase family protein [Bacteroidetes oral taxon 274 str.
F0058]
Length = 471
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL 135
+ KIF + + + +E L GG+VRD LL + DIDI + G FA + L
Sbjct: 8 DEKIFHTIGDFADNVGIECYL--IGGYVRDLLLDRGSKDIDIVVVGD-GVAFAEGLRRQL 64
Query: 136 SATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
T+ + F + TA +K + I+ V R E Y +SR P + GT
Sbjct: 65 GKG--TSLAVF----------RTYGTAQLKTRNGEIEIVGARRESYRHDSRNPIVEEGTL 112
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
E+D RRD TIN+L +N +L GI DL + I TPL P TF DDPLR++R
Sbjct: 113 EDDQNRRDFTINALAICLNKKHFGELIDPFGGIEDLGNRLIRTPLDPDITFSDDPLRMMR 172
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
AIRF + FI+ +E A + + + I++ER+ EI+ ++ +P
Sbjct: 173 AIRFATQLGFIIQDETLVAIWRNRERIKI---ITKERIADEINKILLSAKP 220
>gi|406673629|ref|ZP_11080850.1| hypothetical protein HMPREF9700_01392 [Bergeyella zoohelcum CCUG
30536]
gi|405586094|gb|EKB59886.1| hypothetical protein HMPREF9700_01392 [Bergeyella zoohelcum CCUG
30536]
Length = 474
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 126/242 (52%), Gaps = 23/242 (9%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLS 136
K+F + +++ H ++V + GG+VRD ++ + DID + G E A K+++ +
Sbjct: 13 KLFKTI-SSIAHTEHQSVY-IVGGFVRDLIMKRGLPTDIDFVTEGS-GIELAQKISQKID 69
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE 196
+ S F K+ TA + + ++FV R E YSENSR P + G+ E
Sbjct: 70 P--KIKVSVF----------KNFGTAMFRYKNAELEFVGARKESYSENSRKPAVETGSLE 117
Query: 197 EDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
+D RRD TIN++ ++N S+ L G+ ++ ++TPL P+ T+ DDPLR++RA
Sbjct: 118 DDQKRRDFTINAMAISLNPSNFGKLIDPFNGLKAIEDKLLITPLEPRQTYSDDPLRMMRA 177
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT--HIC 312
IRF F ++E+ +A ++ + + +S ER+ E + ++ +P + H
Sbjct: 178 IRFATILGFNIEEKSFEAIITEAERIKI---VSMERIMVEFNKIMMAKKPSIGLHLLHKA 234
Query: 313 GL 314
GL
Sbjct: 235 GL 236
>gi|313677488|ref|YP_004055484.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Marivirga tractuosa DSM 4126]
gi|312944186|gb|ADR23376.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Marivirga tractuosa DSM 4126]
Length = 471
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 107/210 (50%), Gaps = 20/210 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD +L + DID G + A +VA + + + F V K
Sbjct: 29 VVGGYVRDLILKRPSKDIDFVCVGS-GIDLAKEVAANIGSKKK-----FQVF-------K 75
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA++ D ++FV R E Y +SR P + GT E+D RRD TIN+L ++N +
Sbjct: 76 NFGTASIHHGDWELEFVGARKESYQRDSRKPIVEEGTLEDDQNRRDFTINALAISLNEEN 135
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
L G+ DLK I TPL P TF DDPLR++RAIRF ++ +F ++
Sbjct: 136 YGALIDPFGGVKDLKKKIIKTPLEPDVTFSDDPLRMIRAIRFASQLNF----DIAPNTFD 191
Query: 276 DEVKAALAAK-ISRERVGTEIDLMVSGNQP 304
+K A K IS ER+ E++ ++ +P
Sbjct: 192 SIIKNAERLKIISAERITDELNKIILTEKP 221
>gi|20807771|ref|NP_622942.1| tRNA nucleotidyltransferase/poly(A) polymerase [Thermoanaerobacter
tengcongensis MB4]
gi|254478691|ref|ZP_05092062.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Carboxydibrachium pacificum DSM 12653]
gi|20516327|gb|AAM24546.1| tRNA nucleotidyltransferase/poly(A) polymerase [Thermoanaerobacter
tengcongensis MB4]
gi|214035378|gb|EEB76081.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Carboxydibrachium pacificum DSM 12653]
Length = 390
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 121/232 (52%), Gaps = 22/232 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLG + +DID+ ++ G +FA ++ EY+ P+
Sbjct: 27 IVGGVVRDFLLGVENWDIDVVVEGN-GIDFAYELNEYIKGELIEYPA------------- 72
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+TAT+K + ID ++ R E Y + +P + F ED RRD TIN+L Y++
Sbjct: 73 -FKTATIKKSGISIDVISARREYYDYPAALPRIEFADIYEDMRRRDFTINTLAYDVLEEK 131
Query: 218 VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDE 277
+ D G GI DLK G I+ L K +F+DDP R+ RAIR+ R+ F + E +A D
Sbjct: 132 ILDYFG-GIEDLKKG-IIRVLHEK-SFIDDPTRIFRAIRYSVRYSFEI-EANTEALMKDS 187
Query: 278 VKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFK-LPLQVE 328
+K + +S +R+ E+ L++ + + + + + ++FK +P+ V+
Sbjct: 188 IKN--ISLLSEDRIRNELFLILKEPKAKEMIEKVIEYGIDKVIFKDVPVNVD 237
>gi|229495960|ref|ZP_04389684.1| polyA polymerase family protein [Porphyromonas endodontalis ATCC
35406]
gi|229317052|gb|EEN82961.1| polyA polymerase family protein [Porphyromonas endodontalis ATCC
35406]
Length = 475
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 111/232 (47%), Gaps = 22/232 (9%)
Query: 76 ETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL 135
+T +F + +E V GG+VRD LL + DID+ + G + A A+
Sbjct: 12 DTPLFHLISEAADELGVEAY--VVGGYVRDLLLHRTTGDIDV-VSVGRGIDLARAFAKKW 68
Query: 136 SATGETAP-SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGT 194
+ + FG TA +K + ++FV R E Y +SR P + GT
Sbjct: 69 GRGAHLSVFANFG-------------TAQVKKGGIEVEFVGARRESYRRDSRKPIVEDGT 115
Query: 195 AEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVL 252
EED RRD TIN++ +N +L G+ DL+ + TPL P TF DDPLR+L
Sbjct: 116 LEEDQERRDFTINAMALCLNKERFGELVDPFYGLEDLEDCLLRTPLDPDVTFSDDPLRML 175
Query: 253 RAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
R IRF ++ F LDEE +A E A +S ER+ E++ ++ +P
Sbjct: 176 RGIRFASQLGFFLDEETFEAI---ERNAERIQIVSAERIIVELNKIMLSPKP 224
>gi|304390464|ref|ZP_07372417.1| tRNA adenylyltransferase [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|304326220|gb|EFL93465.1| tRNA adenylyltransferase [Mobiluncus curtisii subsp. curtisii ATCC
35241]
Length = 509
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 119/239 (49%), Gaps = 27/239 (11%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LLG +D+D+ + E + + A D ++
Sbjct: 61 GGPVRDALLGITPHDLDLTT-SARPDETEAVLRSWADAVW--------------DVGRNY 105
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTSSV 218
T + D + R +DY +SR PT++FG T E D +RRD T+NS+ + T +
Sbjct: 106 GTLGARKGDDVFEITTYRSDDYQRDSRKPTVKFGDTLEGDLFRRDFTVNSIALRLPTLEL 165
Query: 219 EDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEV 278
D TG G+ DL G + TP+ P+ +F DDPLR++RA RF A+ +F +D E +A +
Sbjct: 166 VDPTG-GLNDLAAGILRTPIDPEESFSDDPLRIMRAARFAAQLEFDVDYETMQAMETMRE 224
Query: 279 KAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEM 337
+ + +S ERV E+ +++ P + GL L + +L QV PE+++ +M
Sbjct: 225 RLTI---VSPERVQAELSRLMTAPAPRR------GLELM-VYTRLAEQVLPELMDLLDM 273
>gi|436836544|ref|YP_007321760.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Fibrella aestuarina BUZ 2]
gi|384067957|emb|CCH01167.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Fibrella aestuarina BUZ 2]
Length = 510
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 97/178 (54%), Gaps = 22/178 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD +L + DIDI +GS A +AE A G+ A + V +
Sbjct: 29 VVGGYVRDLVLKRPSKDIDIVC---LGSGIA--LAE---AVGQAAGAHVAVY-------Q 73
Query: 158 HLETATMKL-----YDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYN 212
+ TA +++ D+ ++FV R E Y +SR P + GT ++D RRDLTIN++ +
Sbjct: 74 NFGTAMLRMPDPADGDVDVEFVGARKESYRADSRKPIVEDGTLQDDQNRRDLTINAMSIS 133
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
+N + L G+ DLK I TPL P TF DDPLR++RAIRF + +F +D +
Sbjct: 134 LNAADFGALIDPFDGLGDLKRRIIRTPLAPDITFSDDPLRMMRAIRFATQLNFDIDPD 191
>gi|338214523|ref|YP_004658586.1| polynucleotide adenylyltransferase [Runella slithyformis DSM 19594]
gi|336308352|gb|AEI51454.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Runella slithyformis DSM 19594]
Length = 471
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 109/213 (51%), Gaps = 28/213 (13%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD +L + DIDI +GS A E GV + K
Sbjct: 29 VIGGYVRDLILKRPSKDIDIV---SVGSGIAL---------AEAVAHKLGVYVN---VFK 73
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+ TA ++ DL ++FV R E Y SR P + GT ++D RRD TIN++ ++N +
Sbjct: 74 NFGTAQFRVDDLDVEFVGARRESYRTESRKPIVEDGTLQDDQNRRDFTINAMGISLNAQN 133
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE----LKK 271
DL G+ DL+ I TPL + TF DDPLR++RA+RF ++ +F ++ + L K
Sbjct: 134 YGDLIDPFDGMNDLRRKLIKTPLDAEITFSDDPLRMMRAVRFASQLNFDIEPDTFDGLIK 193
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
A ++ IS+ER+ E++ ++ + P
Sbjct: 194 TAERIDI-------ISKERINDELNKIILSDVP 219
>gi|298345833|ref|YP_003718520.1| tRNA adenylyltransferase [Mobiluncus curtisii ATCC 43063]
gi|315654406|ref|ZP_07907314.1| polyA polymerase family protein [Mobiluncus curtisii ATCC 51333]
gi|298235894|gb|ADI67026.1| tRNA adenylyltransferase [Mobiluncus curtisii ATCC 43063]
gi|315491441|gb|EFU81058.1| polyA polymerase family protein [Mobiluncus curtisii ATCC 51333]
Length = 509
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 119/239 (49%), Gaps = 27/239 (11%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LLG +D+D+ + E + + A D ++
Sbjct: 61 GGPVRDALLGITPHDLDLTT-SARPDETEAVLRSWADAVW--------------DVGRNY 105
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTSSV 218
T + D + R +DY +SR PT++FG T E D +RRD T+NS+ + T +
Sbjct: 106 GTLGARKGDDVFEITTYRSDDYQRDSRKPTVKFGDTLEGDLFRRDFTVNSIALRLPTLEL 165
Query: 219 EDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEV 278
D TG G+ DL G + TP+ P+ +F DDPLR++RA RF A+ +F +D E +A +
Sbjct: 166 VDPTG-GLNDLAAGILRTPIDPEESFSDDPLRIMRAARFAAQLEFDVDYETMQAMETMRE 224
Query: 279 KAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEM 337
+ + +S ERV E+ ++ + P + GL L + +L QV PE+++ +M
Sbjct: 225 RLTI---VSPERVQAELSRLMIASAPRR------GLELM-VYTRLAEQVLPELMDLLDM 273
>gi|312131994|ref|YP_003999334.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Leadbetterella byssophila DSM 17132]
gi|311908540|gb|ADQ18981.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Leadbetterella byssophila DSM 17132]
Length = 479
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 34/234 (14%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD +L + DID G E A A L K
Sbjct: 32 VVGGFVRDLILCRAGKDIDFVCVGS-GIELAIATASKLG--------------------K 70
Query: 158 HLETATMK-------LYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSL 209
H+ T K +YD + +FV R E Y +SR P + GT EED RRD TIN++
Sbjct: 71 HISVNTFKNFGTAQFVYDGYEYEFVGARRESYRSDSRKPIVEDGTLEEDQNRRDFTINAM 130
Query: 210 FYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDE 267
++N L +G+ D+K I TPL P+ TF DDPLR++RA+RF ++ +F ++
Sbjct: 131 ALSLNKKDYGRLLDPFQGLEDIKRRLIRTPLDPETTFSDDPLRMMRAVRFASQLNFDIET 190
Query: 268 ELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
E + + A + IS+ER+ E++ ++ +P + + L I+F
Sbjct: 191 ETFEGLKA---MAPRISIISQERITDELNKIILSPKPSYGFKLLYQVGLLEIIF 241
>gi|217077799|ref|YP_002335517.1| polyA polymerase [Thermosipho africanus TCF52B]
gi|217037654|gb|ACJ76176.1| polyA polymerase family protein [Thermosipho africanus TCF52B]
Length = 859
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 115/227 (50%), Gaps = 21/227 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LLG + YDIDI ++ G EFA ++ L A + K
Sbjct: 472 VVGGFVRDLLLGLENYDIDIVVEGN-GLEFAKYASKQLGA-------------KMVEHEK 517
Query: 158 HLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
L TA++ D + ID R E Y + + +P + T ++D YRRD TIN++ +NT
Sbjct: 518 FL-TASLFFKDGFRIDIATARTEYYEKPADLPQVDISTIKKDLYRRDFTINAMAIKLNTK 576
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
L DLK G I + K +F++DP R++RA+RF RF F ++EE +
Sbjct: 577 EFGLLYDFFDSRKDLKEGLI--RVLHKLSFVEDPTRIIRAVRFEQRFGFKIEEETLR-IL 633
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
++ + K+S +R+ E++ ++ +P+ A+ + L + +F
Sbjct: 634 NETLNGGFLEKVSGQRIRQELEKILEEREPLNAIKRLAQLKILKHIF 680
>gi|419760400|ref|ZP_14286679.1| polyA polymerase [Thermosipho africanus H17ap60334]
gi|407514503|gb|EKF49318.1| polyA polymerase [Thermosipho africanus H17ap60334]
Length = 859
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 115/227 (50%), Gaps = 21/227 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LLG + YDIDI ++ G EFA ++ L A + K
Sbjct: 472 VVGGFVRDLLLGLENYDIDIVVEGN-GLEFAKYASKQLGA-------------KMVEHEK 517
Query: 158 HLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
L TA++ D + ID R E Y + + +P + T ++D YRRD TIN++ +NT
Sbjct: 518 FL-TASLFFKDGFRIDIATARTEYYEKPADLPQVDISTIKKDLYRRDFTINAMAIKLNTK 576
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
L DLK G I + K +F++DP R++RA+RF RF F ++EE +
Sbjct: 577 EFGLLYDFFDSRKDLKEGLI--RVLHKLSFVEDPTRIIRAVRFEQRFGFKIEEETLR-IL 633
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
++ + K+S +R+ E++ ++ +P+ A+ + L + +F
Sbjct: 634 NETLNGGFLEKVSGQRIRQELEKILEEREPLNAIKRLAQLKILKHIF 680
>gi|338730115|ref|YP_004659507.1| CBS domain-containing protein [Thermotoga thermarum DSM 5069]
gi|335364466|gb|AEH50411.1| CBS domain containing protein [Thermotoga thermarum DSM 5069]
Length = 872
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 126/270 (46%), Gaps = 37/270 (13%)
Query: 57 EPPRPVVVQVRDKIELTDTETKIFSCL-------LNTLRHFNLETVLRV--AGGWVRDKL 107
+P RP+ Q +KI + K+ SCL L T F E L V GG+VRD L
Sbjct: 433 KPKRPITQQ-SEKI-FHNVHDKMISCLPREIYNLLKTFGQFGDEVGLNVYVVGGFVRDLL 490
Query: 108 LGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKH--LETATMK 165
+ +DID+ ++ G +FA AE L AT KH TA++
Sbjct: 491 MDNPSFDIDLVVERD-GLKFAEHAAEKLKAT----------------LVKHDKFLTASLF 533
Query: 166 LYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS---VEDLT 222
+D R E Y + +P + T +D YRRD TIN++ +N + D
Sbjct: 534 FNGRRVDVATARIEYYEAPTELPQVEISTIRKDLYRRDFTINAMAIKLNHKDFGLLLDFF 593
Query: 223 GRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAAL 282
G G D+++ KI +F++DP R+LRA+RF RFDF ++EE ++ + +
Sbjct: 594 G-GQEDIQNKKI--RCLHTLSFIEDPTRILRAVRFEVRFDFTIEEETER-LMREAIHQGY 649
Query: 283 AAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
K+S +R+ E + +V + VKA+ +
Sbjct: 650 LEKVSGQRIRQEFEKIVQEIKAVKAIKRLA 679
>gi|315657672|ref|ZP_07910554.1| polyA polymerase family protein [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492144|gb|EFU81753.1| polyA polymerase family protein [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 509
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 119/239 (49%), Gaps = 27/239 (11%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LLG +D+D+ + E + + A D ++
Sbjct: 61 GGPVRDALLGITPHDLDLTT-SARPDETEAVLRSWADAVW--------------DVGRNY 105
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTSSV 218
T + D + R +DY +SR PT++FG T E D +RRD T+NS+ + T +
Sbjct: 106 GTLGARKGDDVFEITTYRSDDYQRDSRKPTVKFGDTLEGDLFRRDFTVNSIALRLPTLEL 165
Query: 219 EDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEV 278
D TG G+ DL G + TP+ P+ +F DDPLR++RA RF A+ +F +D E +A +
Sbjct: 166 VDPTG-GLNDLVAGILRTPIDPEESFSDDPLRIMRAARFAAQLEFDVDYETMQAMETMRE 224
Query: 279 KAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCEM 337
+ + +S ERV E+ ++ + P + GL L + +L QV PE+++ +M
Sbjct: 225 RLTI---VSPERVQAELSRLMIASAPRR------GLELM-VYTRLAEQVLPELMDLLDM 273
>gi|444335729|ref|YP_007392098.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Blattabacterium
sp. (Blatta orientalis) str. Tarazona]
gi|444300108|gb|AGD98345.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Blattabacterium
sp. (Blatta orientalis) str. Tarazona]
Length = 472
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 24/242 (9%)
Query: 98 VAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LLGK Y D+DI L G A +V+++++ T +
Sbjct: 28 VVGGYVRDFLLGKRIYKDLDI-LTIGEGIRLAKEVSKHINPTPRI------------NIF 74
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K TA ++ + I+FV R E Y SR P + G+ ++D RRD TIN+L ++N
Sbjct: 75 KRFGTAMLEYKNHKIEFVGSRKESYHLYSRKPIIEIGSLQDDQKRRDFTINALAISLNER 134
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ +L G++DL+ + TPL T+ DDPLR++RAIRF + F +D+ ++
Sbjct: 135 NYGELIDPFGGLSDLEKKTLRTPLNSDVTYSDDPLRMMRAIRFATQLQFFIDKSSFQSIQ 194
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEG 334
+ + + +S ER+ E + ++ +P + + L I+ LP E +L+G
Sbjct: 195 RNRNRINI---VSMERIIEEFNKILLSKKPSIGLFLLYESGLLSII--LP---ELTLLQG 246
Query: 335 CE 336
E
Sbjct: 247 IE 248
>gi|110598827|ref|ZP_01387084.1| Polynucleotide adenylyltransferase region:Metal-dependent
phosphohydrolase, HD subdomain [Chlorobium ferrooxidans
DSM 13031]
gi|110339558|gb|EAT58076.1| Polynucleotide adenylyltransferase region:Metal-dependent
phosphohydrolase, HD subdomain [Chlorobium ferrooxidans
DSM 13031]
Length = 513
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 104/211 (49%), Gaps = 18/211 (8%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSE--FATKVAEYLSATGETAPSGFGVIPSNPDQ 155
+ GG+VRD L+ + C DIDI + +G FA V L F +
Sbjct: 63 LVGGYVRDLLMQRPCSDIDIMV---IGDPVPFAGTVQRELHGRNFVLFERF--------R 111
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
+ LE + + ++ V R E Y+ +SR P GT ++D RRD TIN+L +N
Sbjct: 112 TAQLELSDPQHGSFKVELVGARKESYNPDSRKPVTLIGTLDDDLSRRDFTINALAMVLNR 171
Query: 216 SSVEDLTGR--GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
D+ G+ DL+ G + TPL P+ TF DDPLR++RA RF A+ DF L ++ A
Sbjct: 172 DGRNDIIDHFNGLDDLRSGILKTPLDPEQTFSDDPLRMMRAARFAAQLDFKLLPDVLAAM 231
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
S + + +S ERV E ++ ++P
Sbjct: 232 KSMHERIRI---VSIERVSHEFFKIMQASRP 259
>gi|261749258|ref|YP_003256943.1| tRNA nucleotidyltransferase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497350|gb|ACX83800.1| tRNA nucleotidyltransferase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 472
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 24/242 (9%)
Query: 98 VAGGWVRDKLLGKDCY-DIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LLGK Y D+DI L G A +V+++++ T +
Sbjct: 28 VVGGYVRDFLLGKRIYEDLDI-LTIGEGIRLAKEVSKHINPTPRI------------NIF 74
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K TA ++ + I+FV R E Y SR P + G+ ++D RRD TIN+L ++N
Sbjct: 75 KRFGTAMLEYKNHKIEFVGSRKESYHLYSRKPIIEIGSLQDDQKRRDFTINALAISLNER 134
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ +L G++DL+ + TPL T+ DDPLR++RAIRF + F +D+ ++
Sbjct: 135 NYGELIDPFGGLSDLERKTLRTPLNSDVTYSDDPLRMMRAIRFATQLQFFIDKSSFQSIQ 194
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEG 334
+ + + +S ER+ E + ++ +P + + L I+ LP E +L+G
Sbjct: 195 RNRNRINI---VSMERIIEEFNKILLSKKPSIGLFLLYESGLLSII--LP---ELTLLQG 246
Query: 335 CE 336
E
Sbjct: 247 IE 248
>gi|189500462|ref|YP_001959932.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Chlorobium phaeobacteroides BS1]
gi|189495903|gb|ACE04451.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Chlorobium phaeobacteroides BS1]
Length = 475
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 102/217 (47%), Gaps = 20/217 (9%)
Query: 93 ETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSE--FATKVAEYLSATGETAPSGFGVIP 150
+T + GG+VRD L+ +DIDI + +G FA V + L F
Sbjct: 27 DTPCYLVGGYVRDNLMNTPSHDIDIMI---IGEPIPFAKLVEQELKGKNFVVFERFRTAR 83
Query: 151 SNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLF 210
D S+ T ++ V R E Y+ +SR P G+ E+D RRD TIN+L
Sbjct: 84 LELDSSQEETTV--------VEIVGARKESYNPDSRKPITEIGSLEDDLSRRDFTINALA 135
Query: 211 YNINT---SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDE 267
+N +S+ DL G DL+ + TPL P TF DDPLR++RA RF + DF LD
Sbjct: 136 VQLNNEHRNSIVDLFN-GYDDLQKKMLRTPLEPHKTFSDDPLRMMRAARFACQLDFQLDR 194
Query: 268 ELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ A A +SRER+ E +++ +P
Sbjct: 195 QALNAMTD---MAERITIVSRERISQEFLKIITCRKP 228
>gi|21673818|ref|NP_661883.1| poly(A) polymerase [Chlorobium tepidum TLS]
gi|21646950|gb|AAM72225.1| polyA polymerase family protein [Chlorobium tepidum TLS]
Length = 475
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSE--FATKVAEYLSATGETAPSGFGVIPSNPDQ 155
+ GG+VRD ++ + C DIDI + +G FA +AE L F +
Sbjct: 29 IVGGYVRDLIMQRPCTDIDIMV---IGEPVPFAHALAEKLGGRNFVLFERF--------R 77
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
+ LE K ++ V R E Y+ SR P GT E+D RRD TIN+L +N
Sbjct: 78 TAQLELDDPKAGTFKLEIVGARKESYNPESRKPITSIGTLEDDLSRRDFTINALALRLNR 137
Query: 216 ---SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
V DL G ++ + TPL P+ TF DDPLR++RA RF + DF LDE A
Sbjct: 138 KERGEVVDLFD-GQRHIREKLLKTPLDPEQTFSDDPLRMMRAARFACQLDFQLDEATLTA 196
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
++ + + +SRERV E ++ +P
Sbjct: 197 MSTMSSRIQI---VSRERVSHEFFKIMEARKP 225
>gi|194334118|ref|YP_002015978.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Prosthecochloris aestuarii DSM 271]
gi|194311936|gb|ACF46331.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Prosthecochloris aestuarii DSM 271]
Length = 489
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 113/224 (50%), Gaps = 32/224 (14%)
Query: 91 NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGS--EFATKVAEYLSATGETAPSGFGV 148
N+E L GG++RD LL + DIDI + +G FA +V + L F V
Sbjct: 32 NIECYL--VGGYIRDVLLERPSQDIDIMI---IGDPIAFAREVQKQLKG------RNFVV 80
Query: 149 IPSNPDQSKHLETATMKLYD-----LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRD 203
+ TA ++L D + ++ V R E Y+ +SR P G+ E+D RRD
Sbjct: 81 F-------ERFRTARLELDDAVEGPVLLEIVGARKESYNPDSRKPITEIGSLEDDLSRRD 133
Query: 204 LTINSLFYNINT---SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
T+N+L +N + + DL G GI L G + TPL P+ TF DDPLR++RA RF ++
Sbjct: 134 FTVNALALELNALNRNRIVDLYG-GIEALHSGILKTPLEPEKTFSDDPLRMMRAARFSSQ 192
Query: 261 FDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+F L +E A + + ++ +SRERV E ++ +P
Sbjct: 193 LEFSLTDETLDAIKAMHTRISI---VSRERVSHEFLKIMQSPKP 233
>gi|294508469|ref|YP_003572527.1| tRNA nucleotidyltransferase [Salinibacter ruber M8]
gi|294344797|emb|CBH25575.1| tRNA nucleotidyltransferase [Salinibacter ruber M8]
Length = 562
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 113/255 (44%), Gaps = 47/255 (18%)
Query: 80 FSCLLNTLRHFNLETVLR--------------VAGGWVRDKLLGKDCYDID--------- 116
L + LR E++LR GG VRD LLG+ D+D
Sbjct: 10 IDTLADRLRDVPYESILRTIGRVAERKGIEAYAVGGMVRDVLLGRSTTDLDFVTVGPETG 69
Query: 117 IALDNMMGSEFATKVAEYLSATGETA---PSGFGVIPSNPDQSKHLETATMKLYDLWIDF 173
IAL +G + A G A P+ + +PD + L ++F
Sbjct: 70 IALAEAVGEALGGRTAHVYPKFGTAALRIPAADALPDDHPDDA------------LVLEF 117
Query: 174 VNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS----VEDLTGRGIADL 229
V R E Y +SR P + GT E+D YRRD T+N++ ++ ++ GR DL
Sbjct: 118 VAARKESYRSDSRKPEVEAGTLEDDQYRRDFTVNAMAIHLTPDRFGVLLDPFDGR--RDL 175
Query: 230 KHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRE 289
+ I TPL P TF DDPLR++RA RF + +F + + + A + +A +S+E
Sbjct: 176 ERQTIDTPLDPADTFEDDPLRMIRAARFATQLEFRVSDRVFDAMGA---QAHRVEILSQE 232
Query: 290 RVGTEIDLMVSGNQP 304
R+ E+ M+ + P
Sbjct: 233 RITEELHKMLEADTP 247
>gi|357420887|ref|YP_004928333.1| tRNA nucleotidyltransferase [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
gi|354803394|gb|AER40508.1| tRNA nucleotidyltransferase [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
Length = 475
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 14/216 (6%)
Query: 91 NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIP 150
N++ V GG+VRD LL + + LD + E K+A+ +S + +P
Sbjct: 21 NIQQDCYVVGGYVRDFLLRRSSHLFYKDLDILTIGE-GIKLAQEVSKHIKPSPR------ 73
Query: 151 SNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLF 210
+ K TA ++ + I+FV R E Y SR P + FGT ++D RRD TIN+L
Sbjct: 74 --INIFKRFGTAMLEYNNQKIEFVGSRKESYHLYSRKPIINFGTLQDDQNRRDFTINALA 131
Query: 211 YNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
++N + +L G+ DLK + TPL T+ DDPLR++RAIRF + FI++E
Sbjct: 132 ISLNQKNYGELIDPFGGLLDLKKKILRTPLNSDRTYSDDPLRMMRAIRFATQLKFIIEES 191
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
++ ++ + + A ERV E + ++ P
Sbjct: 192 SFQSIQKNKNRINIVAI---ERVTEEFNKILLSKNP 224
>gi|333377223|ref|ZP_08468959.1| hypothetical protein HMPREF9456_00554 [Dysgonomonas mossii DSM
22836]
gi|332886436|gb|EGK06680.1| hypothetical protein HMPREF9456_00554 [Dysgonomonas mossii DSM
22836]
Length = 478
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSA 137
+IF + NLE GG+VRD L + DIDI G E A V + L
Sbjct: 17 EIFDTISRVADEMNLECY--AIGGYVRDIFLRRASKDIDIVTIGK-GIELAQAVTKALGR 73
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
+ + K+ TA +K D I+FV R E Y+ +SR P + GT E+
Sbjct: 74 KAKLS------------VFKNFGTAQIKYKDTEIEFVGARKESYNRDSRKPIVEDGTLED 121
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
D RRD TIN+L +N +L G+ D+ I TPL P TF DDPLR+LRAI
Sbjct: 122 DQNRRDFTINALAICLNKDRFGELLDPFGGLKDMDSLTIRTPLDPDITFSDDPLRMLRAI 181
Query: 256 RFGARFDF 263
RF ++ F
Sbjct: 182 RFSSQLGF 189
>gi|118580041|ref|YP_901291.1| poly(A) polymerase [Pelobacter propionicus DSM 2379]
gi|118502751|gb|ABK99233.1| poly(A) polymerase [Pelobacter propionicus DSM 2379]
Length = 455
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 118/250 (47%), Gaps = 52/250 (20%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALD-------------NMMGSEFA----------TKVAEY 134
+ GG VRD LLG++ D D+ + ++G F +VA +
Sbjct: 43 LVGGCVRDLLLGREPKDFDVVTNATPNQVKRIFRNCRLVGRRFRLAHIHFQDEIIEVATF 102
Query: 135 LS-ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG 193
S A+ E P+ P PD+++ +K D I N+ +G
Sbjct: 103 RSPASDEPDPA-----PKKPDETEQRHPRMLKDDDGMILRDNV---------------YG 142
Query: 194 TAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
T EEDA RRD T+NSL YNI S+ D TG G+ADL G I T P F +DP+R+LR
Sbjct: 143 TPEEDALRRDFTVNSLAYNIADFSIIDFTG-GLADLSAGIIRTIGDPAVRFQEDPVRMLR 201
Query: 254 AIRFGARFDFILDEELKKA--AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
A+RF A+ F ++E+ +KA AA+D + + ++ E + L +SG + K H+
Sbjct: 202 AVRFAAQLGFTIEEQTRKALVAATDTIVRSAPPRLYEE----VLKLFLSG-EGAKCYDHL 256
Query: 312 CGLTLFWIVF 321
LF +F
Sbjct: 257 SRTGLFAALF 266
>gi|87311632|ref|ZP_01093749.1| poly A polymerase [Blastopirellula marina DSM 3645]
gi|87285635|gb|EAQ77552.1| poly A polymerase [Blastopirellula marina DSM 3645]
Length = 426
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 115/243 (47%), Gaps = 35/243 (14%)
Query: 88 RHFNLETVLRV---------AGGWVRDKLLGKDCYDIDIALD---NMMGSEFATKVAEYL 135
R F+LE V + AGG VRD LLG+D D D+A D + F K +
Sbjct: 10 RDFSLEVVRTLKTHGHQALWAGGCVRDMLLGRDPQDFDVATDAPPERVRQIFGEKRTLAI 69
Query: 136 SATGETAPSGFGVIPSNPDQSK-HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGT 194
A+ FGVI + + +E AT + D+ YS+ R +RF +
Sbjct: 70 GAS-------FGVITVQGGKKRGQIEVATFR-QDV----------GYSDGRRPDEVRFTS 111
Query: 195 AEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
AEEDA RRD TIN +FY+ + S++ D G G DL+ + P F +D LR+LRA
Sbjct: 112 AEEDAKRRDFTINGIFYDPDASAIYDFVG-GQIDLRDRLVRAIGDPNQRFAEDKLRMLRA 170
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGL 314
IRF + F F L+ +A A+ +S ERV E+ M+ + V+A+ +
Sbjct: 171 IRFSSTFQFDLEMNTMRAIQRHSRNIAV---VSAERVAVEMRKMLCSPRRVEAVVLLRDS 227
Query: 315 TLF 317
LF
Sbjct: 228 WLF 230
>gi|189220183|ref|YP_001940823.1| tRNA nucleotidyltransferase/poly(A) polymerase [Methylacidiphilum
infernorum V4]
gi|189187041|gb|ACD84226.1| tRNA nucleotidyltransferase/poly(A) polymerase [Methylacidiphilum
infernorum V4]
Length = 443
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 106/214 (49%), Gaps = 28/214 (13%)
Query: 99 AGGWVRDKLLGKDCYDIDIALD---NMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
AGG VRD LL K+ +DIDIA + + + F K + + + FGVI
Sbjct: 22 AGGCVRDILLKKEPHDIDIATSATPDQVQNLFKEKASGLIGKS-------FGVI------ 68
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIP-TMRFGTAEEDAYRRDLTINSLFYNIN 214
+K + + R + S+ R P ++F T +EDA RRD TIN +FY+
Sbjct: 69 -------RVKSGAHFFEVATFRTDIGSQGGRWPKAVQFSTPKEDALRRDFTINGIFYDPL 121
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T ++ D G G D++ +I PK F +D LR+LRAIRF R F ++E+ +A
Sbjct: 122 TGTIIDYVG-GSEDIEKKRIRAIGDPKIRFEEDHLRLLRAIRFAVRLGFSIEEKTWEAIQ 180
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
S A +IS ER+ E+D + +G P K +
Sbjct: 181 SS---AHKITQISPERIREELDKIFTGPDPAKGL 211
>gi|385778887|ref|YP_005688052.1| hypothetical protein Clo1313_1539 [Clostridium thermocellum DSM
1313]
gi|419723096|ref|ZP_14250231.1| CBS domain containing protein [Clostridium thermocellum AD2]
gi|419725000|ref|ZP_14252055.1| CBS domain containing protein [Clostridium thermocellum YS]
gi|316940567|gb|ADU74601.1| CBS domain containing protein [Clostridium thermocellum DSM 1313]
gi|380771620|gb|EIC05485.1| CBS domain containing protein [Clostridium thermocellum YS]
gi|380780863|gb|EIC10526.1| CBS domain containing protein [Clostridium thermocellum AD2]
Length = 877
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 27/212 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIAL--DNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
V GG+VRD +LG + +DIDI + D +M F+ K+A++ A T FG
Sbjct: 483 VVGGFVRDLILGVENFDIDIVVEGDALM---FSEKLAQHYQAH-LTKHDRFG-------- 530
Query: 156 SKHLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
TA + L D ID V R E Y + +P + GT ++D +RRD TINS+ +N
Sbjct: 531 -----TAVVVLEDDFKIDVVTARKEYYEYPASLPVVEGGTIKDDLFRRDFTINSMAIKLN 585
Query: 215 TS---SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
S ++ D G G DL+ G I + +F++DP R+ RAIRF R+DF ++E+ ++
Sbjct: 586 KSGFGNIVDFYG-GRRDLQMGLI--RILYNLSFVEDPTRIFRAIRFEQRYDFKMEEKTEE 642
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
A +++ + K+S ER+ E M+ N
Sbjct: 643 FAIK-AIESGILGKVSHERINFEFFAMLKENN 673
>gi|83814933|ref|YP_446535.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Salinibacter ruber DSM 13855]
gi|83756327|gb|ABC44440.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Salinibacter ruber DSM 13855]
Length = 594
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 111/253 (43%), Gaps = 43/253 (16%)
Query: 80 FSCLLNTLRHFNLETVLR--------------VAGGWVRDKLLGKDCYDID--------- 116
L + LR E++LR GG VRD LLG+ D+D
Sbjct: 41 IDTLADRLRDVPYESILRTIGRVAERKGIEAYAVGGMVRDVLLGRSTTDLDFVTVGPETG 100
Query: 117 IALDNMMGSEFATKVAEYLSATGETA---PSGFGVIPSNPDQSKHLETATMKLYDLWIDF 173
IAL +G + A G A P+ + +PD + L ++F
Sbjct: 101 IALAEAVGEALGGRTAHVYPKFGTAAIRIPAADALPDDHPDDA------------LVLEF 148
Query: 174 VNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKH 231
V R E Y +SR P + GT E+D YRRD T+N++ ++ L G DL+
Sbjct: 149 VAARKESYRSDSRKPEVEAGTLEDDQYRRDFTVNAMAIHLTPDRFGALLDPFDGRRDLER 208
Query: 232 GKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERV 291
I TPL P TF DDPLR++RA RF + +F + + + A + +A +S+ER+
Sbjct: 209 QTIDTPLDPADTFEDDPLRMIRAARFATQLEFRVSDRVFDAMGT---QAHRVEILSQERI 265
Query: 292 GTEIDLMVSGNQP 304
E+ M+ + P
Sbjct: 266 TEELHKMLEADTP 278
>gi|256004006|ref|ZP_05428992.1| CBS domain containing protein [Clostridium thermocellum DSM 2360]
gi|255992134|gb|EEU02230.1| CBS domain containing protein [Clostridium thermocellum DSM 2360]
Length = 870
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 27/212 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIAL--DNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
V GG+VRD +LG + +DIDI + D +M F+ K+A++ A T FG
Sbjct: 485 VVGGFVRDLILGVENFDIDIVVEGDALM---FSEKLAQHYQAH-LTKHDRFG-------- 532
Query: 156 SKHLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
TA + L D ID V R E Y + +P + GT ++D +RRD TINS+ +N
Sbjct: 533 -----TAVVVLEDDFKIDVVTARKEYYEYPASLPVVEGGTIKDDLFRRDFTINSMAIKLN 587
Query: 215 TS---SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
S ++ D G G DL+ G I + +F++DP R+ RAIRF R+DF ++E+ ++
Sbjct: 588 KSGFGNIVDFYG-GRRDLQMGLI--RILYNLSFVEDPTRIFRAIRFEQRYDFKMEEKTEE 644
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
A +++ + K+S ER+ E M+ N
Sbjct: 645 FAIK-AIESGILGKVSHERINFEFFAMLKENN 675
>gi|281417401|ref|ZP_06248421.1| CBS domain containing protein [Clostridium thermocellum JW20]
gi|281408803|gb|EFB39061.1| CBS domain containing protein [Clostridium thermocellum JW20]
Length = 877
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 27/212 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIAL--DNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
V GG+VRD +LG + +DIDI + D +M F+ K+A++ A T FG
Sbjct: 483 VVGGFVRDLILGVENFDIDIVVEGDALM---FSEKLAQHYQAH-LTKHDRFG-------- 530
Query: 156 SKHLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
TA + L D ID V R E Y + +P + GT ++D +RRD TINS+ +N
Sbjct: 531 -----TAVVVLEDDFKIDVVTARKEYYEYPASLPVVEGGTIKDDLFRRDFTINSMAIKLN 585
Query: 215 TS---SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
S ++ D G G DL+ G I + +F++DP R+ RAIRF R+DF ++E+ ++
Sbjct: 586 KSGFGNIVDFYG-GRRDLQMGLI--RILYNLSFVEDPTRIFRAIRFEQRYDFKMEEKTEE 642
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
A +++ + K+S ER+ E M+ N
Sbjct: 643 FAIK-AIESGILGKVSHERINFEFFAMLKENN 673
>gi|125973202|ref|YP_001037112.1| polynucleotide adenylyltransferase region [Clostridium thermocellum
ATCC 27405]
gi|125713427|gb|ABN51919.1| Polynucleotide adenylyltransferase region [Clostridium thermocellum
ATCC 27405]
Length = 877
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 27/212 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIAL--DNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
V GG+VRD +LG + +DIDI + D +M F+ K+A++ A T FG
Sbjct: 483 VVGGFVRDLILGVENFDIDIVVEGDALM---FSEKLAQHYQAH-LTKHDRFG-------- 530
Query: 156 SKHLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
TA + L D ID V R E Y + +P + GT ++D +RRD TINS+ +N
Sbjct: 531 -----TAVVVLEDDFKIDVVTARKEYYEYPASLPVVEGGTIKDDLFRRDFTINSMAIKLN 585
Query: 215 TS---SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
S ++ D G G DL+ G I + +F++DP R+ RAIRF R+DF ++E+ ++
Sbjct: 586 KSGFGNIVDFYG-GRRDLQMGLI--RILYNLSFVEDPTRIFRAIRFEQRYDFKMEEKTEE 642
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
A +++ + K+S ER+ E M+ N
Sbjct: 643 FAIK-AIESGILGKVSHERINFEFFAMLKENN 673
>gi|262341231|ref|YP_003284086.1| tRNA nucleotidyltransferase [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272568|gb|ACY40476.1| tRNA nucleotidyltransferase [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 471
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 98 VAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LLGK D+DI +G K+A+ +S + P
Sbjct: 28 VVGGYVRDFLLGKIKSKDVDIL---TIGE--GIKLAQEVSKNMKPHPK--------IKIF 74
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
+ TA +K + I+FV R E Y SR P +R G+ ++D RRD TIN+L ++N
Sbjct: 75 RRFGTAMLKCENQKIEFVGSRKESYHFYSRKPFIRLGSLQDDQNRRDFTINALAISLNRD 134
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ +L G++DLK + TPL T+ DDPLR++RAIRF + F ++E K+
Sbjct: 135 NYGELIDPFGGLSDLKKKILRTPLNSDITYSDDPLRMMRAIRFATQLQFTIEEYSFKSIQ 194
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
++ + + +S ER+ E + ++ +P
Sbjct: 195 KNKNRINI---VSTERIIEEFNKILLSEKP 221
>gi|354605873|ref|ZP_09023846.1| tRNA adenylyltransferase [Propionibacterium sp. 5_U_42AFAA]
gi|365966188|ref|YP_004947753.1| tRNA adenylyltransferase [Propionibacterium acnes TypeIA2 P.acn17]
gi|422450604|ref|ZP_16527321.1| tRNA adenylyltransferase [Propionibacterium acnes HL030PA2]
gi|422499857|ref|ZP_16576113.1| tRNA adenylyltransferase [Propionibacterium acnes HL063PA2]
gi|313829124|gb|EFS66838.1| tRNA adenylyltransferase [Propionibacterium acnes HL063PA2]
gi|315109748|gb|EFT81724.1| tRNA adenylyltransferase [Propionibacterium acnes HL030PA2]
gi|353558011|gb|EHC27377.1| tRNA adenylyltransferase [Propionibacterium sp. 5_U_42AFAA]
gi|365742869|gb|AEW82563.1| tRNA adenylyltransferase [Propionibacterium acnes TypeIA2 P.acn17]
Length = 492
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G +D+D D A V L+ FG I + D
Sbjct: 52 LHLVGGSVRDALMGTLGHDLDFTTDATPDQTEA--VLRTLTHATWDIGRAFGTIGARID- 108
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T EED RRD T+N++ N
Sbjct: 109 ------------DWVVEVTTFRTDAYQPDSRKPVIAYGETLEEDLVRRDFTVNAMALNAA 156
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T D G+AD+ GK+ TP PP+ +F DDPLR++RA RF ++ F + +E+ +AA
Sbjct: 157 TREFHDPHA-GLADIVAGKLRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTDEV-RAAM 214
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+D A + IS ERV E+ + + P
Sbjct: 215 TD--MAGRISIISAERVRDELSRTLLTDHP 242
>gi|147677571|ref|YP_001211786.1| hypothetical protein PTH_1236 [Pelotomaculum thermopropionicum SI]
gi|146273668|dbj|BAF59417.1| hypothetical protein PTH_1236 [Pelotomaculum thermopropionicum SI]
Length = 873
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 23/236 (9%)
Query: 90 FNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVI 149
FN+ + AGG VRD LLG +C DID+ ++ G E A + + A
Sbjct: 472 FNMGYRVYAAGGIVRDLLLGMECLDIDLVVEG-DGIELARALGQDYGARVRV-------- 522
Query: 150 PSNPDQSKHLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINS 208
+ +TAT+ L W +D R E Y + +P + + +D YRRD TIN+
Sbjct: 523 ------HQKFKTATVLLPGEWQVDVATARMEFYQYPAAMPQIEASSLHQDLYRRDFTINA 576
Query: 209 LFYNINT---SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFIL 265
+ ++N V D G G DL+ G I + +F++DP R+LR IRF R++ L
Sbjct: 577 MAVSLNRDDFGEVVDFFG-GREDLQRGLI--RVLHNLSFVEDPTRLLRGIRFEKRYNMSL 633
Query: 266 DEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ + K A + +++ + A++SRER+ E+ ++ +P A+ + L L+ +F
Sbjct: 634 EPQTLK-LAQEAIRSKMLARVSRERIWEELKCILLEPRPGPALARLAELKLWDFLF 688
>gi|222100844|ref|YP_002535412.1| TRNA nucleotidyl transferase-related protein [Thermotoga
neapolitana DSM 4359]
gi|221573234|gb|ACM24046.1| TRNA nucleotidyl transferase-related protein [Thermotoga
neapolitana DSM 4359]
Length = 864
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 107/222 (48%), Gaps = 29/222 (13%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALD-NMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
V GG+VRD LLG + DIDI ++ N M EFA ++L A
Sbjct: 475 VVGGFVRDLLLGIENLDIDIVVEGNAM--EFAEYAKKFLPAK----------------LV 516
Query: 157 KHLETATMKLY---DLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNI 213
KH + T L+ L ID R E Y +R+P + T ++D YRRD TIN++ +
Sbjct: 517 KHEKFMTASLFLKGGLRIDIATARMEYYESPARLPDVEMSTIKKDLYRRDFTINAMAIKL 576
Query: 214 NTSS---VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
N + D G G DLK G + + +F+DDP R+LRAIRF RFDF + EE
Sbjct: 577 NPGDFGLLVDFFG-GYRDLKEG--IIRVLHTLSFVDDPTRILRAIRFEQRFDFHI-EETT 632
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
+ V+ K + R+ EI+ ++ P+K++ +
Sbjct: 633 ERLLRQAVEEGYLEKTTGARIRQEIEKILEEKNPLKSIRRMA 674
>gi|284035597|ref|YP_003385527.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Spirosoma linguale DSM 74]
gi|283814890|gb|ADB36728.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Spirosoma linguale DSM 74]
Length = 484
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD +L + DID+ G A V + L+A P+ FG
Sbjct: 29 VIGGFVRDLILARPSKDIDVVCIGS-GITLAEAVGKALNAHVAVFPN-FGTA-------- 78
Query: 158 HLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
M+ + W ++FV R E Y SR P + GT E+D RRD TIN++ ++N +
Sbjct: 79 --MLRAMQGDEEWEVEFVGARKESYRSESRKPIVEDGTLEDDQNRRDFTINAMGISLNKA 136
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
S +L G+ DLK I TPL P TF DDPLR++RAIRF ++ F ++ + A
Sbjct: 137 SFGELLDPFDGLKDLKKKIIRTPLNPDITFSDDPLRMMRAIRFASQLTFDIEPDTFDAIM 196
Query: 275 SDEVKAALAAKISRERVGTEIDLMV 299
+ + +SRERV E++ ++
Sbjct: 197 RMNERIDI---VSRERVTDELNKII 218
>gi|419420191|ref|ZP_13960420.1| tRNA adenylyltransferase [Propionibacterium acnes PRP-38]
gi|422394605|ref|ZP_16474646.1| tRNA adenylyltransferase [Propionibacterium acnes HL097PA1]
gi|422437198|ref|ZP_16514045.1| tRNA adenylyltransferase [Propionibacterium acnes HL092PA1]
gi|422492171|ref|ZP_16568479.1| tRNA adenylyltransferase [Propionibacterium acnes HL086PA1]
gi|422514871|ref|ZP_16590989.1| tRNA adenylyltransferase [Propionibacterium acnes HL110PA2]
gi|422523185|ref|ZP_16599197.1| tRNA adenylyltransferase [Propionibacterium acnes HL053PA2]
gi|422531869|ref|ZP_16607817.1| tRNA adenylyltransferase [Propionibacterium acnes HL110PA1]
gi|422536407|ref|ZP_16612315.1| tRNA adenylyltransferase [Propionibacterium acnes HL078PA1]
gi|422544218|ref|ZP_16620058.1| tRNA adenylyltransferase [Propionibacterium acnes HL082PA1]
gi|313792633|gb|EFS40719.1| tRNA adenylyltransferase [Propionibacterium acnes HL110PA1]
gi|313803167|gb|EFS44363.1| tRNA adenylyltransferase [Propionibacterium acnes HL110PA2]
gi|313839560|gb|EFS77274.1| tRNA adenylyltransferase [Propionibacterium acnes HL086PA1]
gi|314963939|gb|EFT08039.1| tRNA adenylyltransferase [Propionibacterium acnes HL082PA1]
gi|315079096|gb|EFT51103.1| tRNA adenylyltransferase [Propionibacterium acnes HL053PA2]
gi|315081559|gb|EFT53535.1| tRNA adenylyltransferase [Propionibacterium acnes HL078PA1]
gi|327334503|gb|EGE76214.1| tRNA adenylyltransferase [Propionibacterium acnes HL097PA1]
gi|327457476|gb|EGF04131.1| tRNA adenylyltransferase [Propionibacterium acnes HL092PA1]
gi|379978565|gb|EIA11889.1| tRNA adenylyltransferase [Propionibacterium acnes PRP-38]
Length = 492
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G +D+D D A V L+ FG I + D
Sbjct: 52 LHLVGGSVRDALMGTLGHDLDFTTDATPDQTEA--VLRTLTHATWDIGRAFGTIGARID- 108
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T EED RRD T+N++ N
Sbjct: 109 ------------DWVVEVTTFRTDAYQPDSRKPVIAYGETLEEDLVRRDFTVNAMALNAA 156
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T D G+AD+ GK+ TP PP+ +F DDPLR++RA RF ++ F + +E+ +AA
Sbjct: 157 TREFHDPHA-GLADIVAGKLRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTDEV-RAAM 214
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+D A + IS ERV E+ + + P
Sbjct: 215 TD--MAGRISIISAERVRDELSRTLLTDHP 242
>gi|32471688|ref|NP_864681.1| poly A polymerase [Rhodopirellula baltica SH 1]
gi|32397059|emb|CAD72363.1| poly A polymerase [Rhodopirellula baltica SH 1]
Length = 427
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 11/199 (5%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+AGG VRD LLG+ D D+A D S A GE+ FGVI P +S
Sbjct: 40 LAGGCVRDALLGRKPKDFDVATDATPESVREVFGKRNTLAFGES----FGVIGVLPPRSA 95
Query: 158 HLETATMKLYDLWIDFVNLRCE-DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
E + KL + + R + +YS+ R ++ +G AE DA RRD TIN +FY++ S
Sbjct: 96 VTEEPSAKL--MPTEVATFRADGNYSDGRRPDSVTYGDAEADAMRRDFTINGMFYDLFES 153
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
V D G GI DL+ G + T F +D LR+LRA+RF F ++ K A+
Sbjct: 154 KVIDYVG-GIQDLEKGHLRTIGKAVQRFEEDKLRMLRAVRFATTLGFSIE---YKTFAAI 209
Query: 277 EVKAALAAKISRERVGTEI 295
+ A+ + +S ER+G E+
Sbjct: 210 QNHASDISVVSGERIGAEM 228
>gi|417304611|ref|ZP_12091623.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhodopirellula
baltica WH47]
gi|327539083|gb|EGF25715.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhodopirellula
baltica WH47]
Length = 420
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 11/199 (5%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+AGG VRD LLG+ D D+A D S A GE+ FGVI P +S
Sbjct: 33 LAGGCVRDALLGRKPKDFDVATDATPESVREVFGKRNTLAFGES----FGVIGVLPPRSA 88
Query: 158 HLETATMKLYDLWIDFVNLRCE-DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
E + KL + + R + +YS+ R ++ +G AE DA RRD TIN +FY++ S
Sbjct: 89 VTEEPSAKL--MPTEVATFRADGNYSDGRRPDSVTYGDAEADAMRRDFTINGMFYDLFDS 146
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
V D G GI DL+ G + T F +D LR+LRA+RF F ++ K A+
Sbjct: 147 KVIDYVG-GIQDLEKGHLRTIGKAVQRFEEDKLRMLRAVRFATTLGFSIE---YKTFAAI 202
Query: 277 EVKAALAAKISRERVGTEI 295
+ A+ + +S ER+G E+
Sbjct: 203 QNHASDISVVSGERIGAEM 221
>gi|421612503|ref|ZP_16053609.1| tRNA adenylyltransferase [Rhodopirellula baltica SH28]
gi|408496624|gb|EKK01177.1| tRNA adenylyltransferase [Rhodopirellula baltica SH28]
Length = 420
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 102/199 (51%), Gaps = 11/199 (5%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+AGG VRD LLG+ D D+A D S A GE+ FGVI P ++
Sbjct: 33 LAGGCVRDALLGRKPKDFDVATDATPESVREVFGKRNTLAFGES----FGVIGVLPPRTA 88
Query: 158 HLETATMKLYDLWIDFVNLRCE-DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
E + KL + + R + +YS+ R ++ +G AE DA RRD TIN +FY++ S
Sbjct: 89 ATEAPSAKL--MPTEVATFRADGNYSDGRRPDSVTYGDAEADAMRRDFTINGMFYDLFDS 146
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
V D G GI DL+ G + T F +D LR+LRA+RF F ++ K A+
Sbjct: 147 KVIDYVG-GIQDLEKGHLRTIGKAVQRFEEDKLRMLRAVRFATTLGFSIE---YKTFAAI 202
Query: 277 EVKAALAAKISRERVGTEI 295
+ A+ + +S ER+G E+
Sbjct: 203 QNHASDISVVSGERIGAEM 221
>gi|449134826|ref|ZP_21770293.1| tRNA adenylyltransferase [Rhodopirellula europaea 6C]
gi|448886541|gb|EMB16945.1| tRNA adenylyltransferase [Rhodopirellula europaea 6C]
Length = 420
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 103/199 (51%), Gaps = 11/199 (5%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+AGG VRD LLG+ D D+A D S A GE+ FGVI P +S
Sbjct: 33 LAGGCVRDALLGRKPKDFDVATDATPESVREVFGKRSTLAFGES----FGVIGVLPPRSA 88
Query: 158 HLETATMKLYDLWIDFVNLRCE-DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
+ ++ KL + + R + +YS+ R ++ +G AE DA RRD TIN +FY++ S
Sbjct: 89 STDDSSTKL--MPTEVATFRADGNYSDGRRPDSVTYGDAEADAMRRDFTINGMFYDLFES 146
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
V D G G+ DL+ G + T F +D LR+LRA+RF F ++ K A+
Sbjct: 147 KVVDYVG-GMEDLEKGHLRTIGKATQRFEEDKLRMLRAVRFATTLGFSIE---YKTFAAI 202
Query: 277 EVKAALAAKISRERVGTEI 295
+ A+ + +S ER+G E+
Sbjct: 203 QNHASDISVVSGERIGAEM 221
>gi|375145306|ref|YP_005007747.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Niastella koreensis GR20-10]
gi|361059352|gb|AEV98343.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Niastella koreensis GR20-10]
Length = 515
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 44/286 (15%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I+ D E +F + + + T V GG+VRDKLLG+ D DI G + A
Sbjct: 3 IKCNDKELFVFKKIAHAADELKMPTY--VIGGFVRDKLLGRPTKDADIVCVGD-GIQLAH 59
Query: 130 KVAEYLS-----------ATGETAPSGFGVIPSNPDQSKHL-----ETATMKLYD----- 168
KVAE T + F KH+ + A + + D
Sbjct: 60 KVAERFQPKPSVSFFKNFGTAQIKLKHFYEDEPGAVDHKHIVDVNGQEAQVVISDALPEE 119
Query: 169 -------LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDL 221
L I+FV R E Y +SR P + GT ++D RRD TIN++ ++N L
Sbjct: 120 QVHEKSALEIEFVGARKESYRYHSRNPEVVPGTLKDDQDRRDFTINAMAISLNADDYGKL 179
Query: 222 TG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD----EELKKAAAS 275
G+ DL+ I TPL P TF DDPLR++RA+RF ++ +F + + +K A
Sbjct: 180 IDPFNGVLDLERKIIQTPLDPGQTFSDDPLRMMRAVRFASQLNFTIAPVTFQSIKDQA-- 237
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
D ++ IS+ER+ E++ ++ +P + + L I+F
Sbjct: 238 DRIRI-----ISQERITEELNKILLSAKPSVGLDLLYQSGLLHIIF 278
>gi|374295863|ref|YP_005046054.1| tRNA nucleotidyltransferase/poly(A) polymerase [Clostridium
clariflavum DSM 19732]
gi|359825357|gb|AEV68130.1| tRNA nucleotidyltransferase/poly(A) polymerase [Clostridium
clariflavum DSM 19732]
Length = 876
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 109/226 (48%), Gaps = 27/226 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD +LG + DIDI ++ FA K A + N +
Sbjct: 483 VVGGFVRDLILGVENLDIDIVIEGD-AVAFAQKFASQI----------------NAKITV 525
Query: 158 HLETATMKLY---DLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
H + T +Y DL IDFV R E Y +P + GT ++D +RRD TIN + +N
Sbjct: 526 HEKFQTAYVYIDEDLQIDFVTARKEYYEFPGSLPIIETGTIKDDLFRRDFTINCIAMKLN 585
Query: 215 T---SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
V D G G DL G V + +F++DP R++RA+RF R+ F++DE+ ++
Sbjct: 586 GDEFGKVVDFYG-GRRDLYDG--VIRILYNLSFIEDPTRIIRAVRFEQRYGFLMDEKTEE 642
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF 317
A VK+ + K+S ER+ TE M+ K + + L L
Sbjct: 643 FAIK-AVKSDVLDKLSIERINTEFFYMLKEKNAAKMLQRLKELGLL 687
>gi|440713127|ref|ZP_20893732.1| tRNA adenylyltransferase [Rhodopirellula baltica SWK14]
gi|436442146|gb|ELP35314.1| tRNA adenylyltransferase [Rhodopirellula baltica SWK14]
Length = 420
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 102/199 (51%), Gaps = 11/199 (5%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+AGG VRD LLG+ D D+A D S A GE+ FGVI P ++
Sbjct: 33 LAGGCVRDALLGRKPKDFDVATDATPESVREVFGKRNTLAFGES----FGVIGVLPPRTA 88
Query: 158 HLETATMKLYDLWIDFVNLRCE-DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
E + KL + + R + +YS+ R ++ +G AE DA RRD TIN +FY++ S
Sbjct: 89 ATEEPSAKL--MPTEVATFRADGNYSDGRRPDSVTYGDAEADAMRRDFTINGMFYDLFDS 146
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
V D G GI DL+ G + T F +D LR+LRA+RF F ++ K A+
Sbjct: 147 KVIDYVG-GIQDLEKGHLRTIGKAVQRFEEDKLRMLRAVRFATTLGFSIE---YKTFAAI 202
Query: 277 EVKAALAAKISRERVGTEI 295
+ A+ + +S ER+G E+
Sbjct: 203 QNHASDISVVSGERIGAEM 221
>gi|167629951|ref|YP_001680450.1| tRNA nucleotidyltransferase/poly(a) polymerase [Heliobacterium
modesticaldum Ice1]
gi|167592691|gb|ABZ84439.1| tRNA nucleotidyltransferase/poly(a) polymerase [Heliobacterium
modesticaldum Ice1]
Length = 891
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 20/222 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LLG + DID+ ++ G FAT++A +L T T FG
Sbjct: 487 VVGGFVRDLLLGVNNLDIDLVVEGD-GICFATELARFLKGTLRTHEK-FG---------- 534
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
TA ++ D ID R E Y + +P + +D YRRD TIN+L +N
Sbjct: 535 ---TAVIRWGDQKIDVATARREFYQYPAALPQVEASDLRQDLYRRDFTINALAIRLNRER 591
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L +G+ DL+ G + +F++DP R+LRAIRF R+ F ++ + A
Sbjct: 592 FGELVDFFQGVKDLEQGLVRVLY--NLSFVEDPTRILRAIRFEQRYGFTIEPQ-TMGFAR 648
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF 317
+ + + ++S ER+ E+ L++S P A+ + L L+
Sbjct: 649 EAIARQMIRELSYERMVDELILILSEENPAPALRRLTELGLW 690
>gi|325845057|ref|ZP_08168373.1| tRNA adenylyltransferase [Turicibacter sp. HGF1]
gi|325488933|gb|EGC91326.1| tRNA adenylyltransferase [Turicibacter sp. HGF1]
Length = 386
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 126/249 (50%), Gaps = 32/249 (12%)
Query: 99 AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKH 158
GG VRD+LLG+D YDIDI + K + +T +G KH
Sbjct: 24 VGGMVRDRLLGRDIYDIDITT--------SAKPDVVIGLFEKTIQTGI----------KH 65
Query: 159 LETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRFGTAE-EDAYRRDLTINSLFYNINTS 216
T T+ + + ++ R E+ E+ R P+ +RF ++ ED RRD T+N++ +I+
Sbjct: 66 -GTVTVMIEGIPVEVTTFRVEEAYEDFRRPSEVRFTSSLIEDLKRRDFTVNAIAESID-G 123
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
++ED G+ DL + +I K F++DPLR+LR +RF ++ F L++E KA
Sbjct: 124 TLED-PFHGLKDLSNRQIKAVGEAKERFIEDPLRMLRGLRFMSKLGFELEDETSKAIG-- 180
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAM-----THIC-GLTLFWIVFKLPLQVEPE 330
EV AL IS+ER+ EI+ MVSG +KA T +C +T F + +
Sbjct: 181 EV-GALIEHISKERIKKEIEGMVSGEFSLKAFNLLIHTPLCDSITYFKELKRYSSSNLAR 239
Query: 331 VLEGCEMFC 339
+ EG E+F
Sbjct: 240 LEEGVELFA 248
>gi|269839869|ref|YP_003324562.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Thermobaculum terrenum ATCC BAA-798]
gi|269791599|gb|ACZ43739.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Thermobaculum terrenum ATCC BAA-798]
Length = 484
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 114/240 (47%), Gaps = 28/240 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L GG VRD LLGK+ ++D A + E +A + T FG I
Sbjct: 38 LYAVGGCVRDSLLGKEVQELDFAT-SAHPEEIKRLLAPLRPDSVYTVGERFGTI------ 90
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
A Y ++ R E YS +SR P + FG + EED RRD T+N++ +I
Sbjct: 91 -----GAIFGPYR--VEITTYRGEWYSPDSRKPEVTFGISLEEDLSRRDFTVNAIAMDIP 143
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLP-PKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+ + D G G+ DL H K++ + P A F DDPLR++RA+RF A F ++ + A
Sbjct: 144 SGRLIDPFG-GVEDL-HSKVIRAVGDPDARFRDDPLRLMRAVRFAANLGFKIE---PRTA 198
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
+ AA KIS ERV E+ M++G P A+ + L L + PEV+E
Sbjct: 199 EAIRRHAAQICKISIERVRDELTRMLTGPAPDVAIAALVDLGLMQYIV-------PEVVE 251
>gi|323357972|ref|YP_004224368.1| tRNA nucleotidyltransferase/poly(A) polymerase [Microbacterium
testaceum StLB037]
gi|323274343|dbj|BAJ74488.1| tRNA nucleotidyltransferase/poly(A) polymerase [Microbacterium
testaceum StLB037]
Length = 479
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 108/214 (50%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ +D D D A + + +S+ FG I +
Sbjct: 34 LAIVGGPVRDALLGRLTHDFDFTTDARPDEILA--LVKPVSSVQWDVGRDFGTIGA---- 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
+++ ++ R + Y +R PT+ FG T E D RRD T+N++ +
Sbjct: 88 ---------RVHGEQVEITTYRADSYDGVTRKPTVEFGDTLEADLTRRDFTVNAMALRVP 138
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
++ D TG G+ DL G++ TP+ P +F DDPLR+LR RF ++ +F +D + A A
Sbjct: 139 ARTLVDPTG-GVEDLIAGRLRTPIDPAVSFGDDPLRMLRGARFASQLEFDIDPDTLDAIA 197
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
E++ L +S ERV +E+ ++ + PV+ +
Sbjct: 198 --ELRQTLQI-VSPERVQSELVRLLQTDDPVRGI 228
>gi|307699928|ref|ZP_07636979.1| tRNA adenylyltransferase [Mobiluncus mulieris FB024-16]
gi|307614966|gb|EFN94184.1| tRNA adenylyltransferase [Mobiluncus mulieris FB024-16]
Length = 486
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 27/237 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLG+ +D+D+ + E T + + A + FG I +
Sbjct: 36 LVGGPVRDALLGQAPHDLDLTT-SARPEEIETVLRPWADAVWDVG-RNFGTIGA------ 87
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTS 216
+ D + RC++Y +SR P ++FG T E D +RRD T+N++ +
Sbjct: 88 -------RKGDAIFEITTYRCDEYQRDSRKPLVKFGDTLEGDLWRRDFTVNAMALRLPEM 140
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
++ D TG G DL+ + TP+ P+ +F DDPLR++RA RF A+ F +D + A
Sbjct: 141 TLVDPTG-GERDLEQQMLRTPISPEESFNDDPLRIMRAARFAAQLGFDIDYSVLTAMQDM 199
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
+ + +SRER+ E ++ P + GL L + + QV PE++E
Sbjct: 200 RERLQI---VSRERIQAEFSRLLVSPWPRR------GLELM-VYTDVAAQVVPELME 246
>gi|293376425|ref|ZP_06622657.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Turicibacter sanguinis PC909]
gi|292644934|gb|EFF63012.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Turicibacter sanguinis PC909]
Length = 386
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 133/270 (49%), Gaps = 34/270 (12%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSA 137
++ +LN L E GG VRD+LLG+D YDIDI + K +
Sbjct: 5 RVGKVVLNRLIENGYEAYF--VGGMVRDRLLGRDIYDIDITT--------SAKPDVVIGL 54
Query: 138 TGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRFGTAE 196
+T +G KH T T+ + + ++ R E+ E+ R P+ +RF ++
Sbjct: 55 FEKTIQTGI----------KH-GTVTVMIEGIPVEVTTFRVEEAYEDFRRPSEVRFTSSL 103
Query: 197 -EDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAI 255
ED RRD T+N++ +I+ ++ED G+ DL + +I K F++DPLR+LR +
Sbjct: 104 IEDLKRRDFTMNAIAESID-GTLED-PFHGLKDLSNRQIKAVGEAKERFIEDPLRMLRGL 161
Query: 256 RFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM-----TH 310
RF ++ F L++E KA EV AL IS+ER+ EI+ MVSG +KA T
Sbjct: 162 RFMSKLGFELEDETSKAIG--EV-GALIEHISKERIKKEIEGMVSGEFSLKAFNLLIHTP 218
Query: 311 IC-GLTLFWIVFKLPLQVEPEVLEGCEMFC 339
+C +T F + + + EG E+F
Sbjct: 219 LCDSITYFKELKRYSSSNLARLEEGVELFA 248
>gi|387906948|ref|YP_006337283.1| tRNA nucleotidyltransferase [Blattabacterium sp. (Blaberus
giganteus)]
gi|387581840|gb|AFJ90618.1| tRNA nucleotidyltransferase [Blattabacterium sp. (Blaberus
giganteus)]
Length = 472
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 120/231 (51%), Gaps = 23/231 (9%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLS 136
KIF + ++ + ++ V GG+VRD LLGK D+DI L G A +V++Y
Sbjct: 10 KIFHIISDSSKRIKQKSY--VIGGYVRDFLLGKMKSKDLDI-LTIGKGVRLAKEVSKY-- 64
Query: 137 ATGETAPSGFGVIPSNPDQS-KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
+IP + K TA ++ + I+FV R E Y SR P + FG+
Sbjct: 65 -----------IIPYPKIRIFKRFGTAMLEYDNQKIEFVGSRKESYHFYSRKPIIEFGSL 113
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
++D RRD TIN+L ++N ++ +L G++DLK + TPL T+ DDPLR++R
Sbjct: 114 QDDQNRRDFTINALAISLNRNNYGELIDPFGGLSDLKKKILRTPLDANLTYSDDPLRMMR 173
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
AIRF + F +++ ++ ++ + + +S ER+ E + ++ +P
Sbjct: 174 AIRFATQLKFDIEKYSFQSIQKNKSRINI---VSTERIIEEFNKILLSEKP 221
>gi|442315482|ref|YP_007356785.1| hypothetical protein G148_1787 [Riemerella anatipestifer RA-CH-2]
gi|441484405|gb|AGC41091.1| hypothetical protein G148_1787 [Riemerella anatipestifer RA-CH-2]
Length = 476
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
+ GG+VRD L+ + DID + G E A VA+ L + + S F
Sbjct: 32 IVGGYVRDLLMKRQVPTDIDFVTEQS-GIELAQAVAKELDSNLKV--SVF---------- 78
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K TA +K L ++FV R E YSE+SR P + G+ E+D RRD TIN++ ++
Sbjct: 79 KTYGTAMIKWKGLELEFVGARKESYSEDSRKPAVEQGSLEDDQKRRDFTINAMAISLGKE 138
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
L G+ DL+ + TPL P T+ DDPLR++RAIRF + +F +++ A
Sbjct: 139 DFGRLVDPFGGVQDLESKILKTPLEPLQTYSDDPLRMMRAIRFASTLNFKVEQNSLDAIK 198
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ + + +S ER+ E + ++ +P
Sbjct: 199 QEADRIKI---VSMERIMVEFNKIMLSEKP 225
>gi|386320733|ref|YP_006016895.1| tRNA nucleotidyltransferase/poly(A) polymerase [Riemerella
anatipestifer RA-GD]
gi|416110043|ref|ZP_11591842.1| tRNA nucleotidyltransferase [Riemerella anatipestifer RA-YM]
gi|315023502|gb|EFT36508.1| tRNA nucleotidyltransferase [Riemerella anatipestifer RA-YM]
gi|325335276|gb|ADZ11550.1| tRNA nucleotidyltransferase/poly(A) polymerase [Riemerella
anatipestifer RA-GD]
Length = 476
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 107/212 (50%), Gaps = 23/212 (10%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
+ GG+VRD L+ + DID + G E A VA+ L + + S F
Sbjct: 32 IVGGYVRDLLMKRQVPTDIDFVTEQS-GIELAQAVAKELDSNLKV--SVF---------- 78
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K TA +K L ++FV R E YSE+SR P + G+ E+D RRD TIN++ ++
Sbjct: 79 KTYGTAMIKWKGLELEFVGARKESYSEDSRKPAVEQGSLEDDQKRRDFTINAMAISLGKE 138
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA-- 272
L G+ DL+ + TPL P T+ DDPLR++RAIRF + +F +++ A
Sbjct: 139 DFGRLVDPFGGVQDLESKILKTPLEPLQTYSDDPLRMMRAIRFASTLNFKVEQNSLDAIK 198
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+D +K +S ER+ E + ++ +P
Sbjct: 199 QEADRIKI-----VSMERIMVEFNKIMLSEKP 225
>gi|407450825|ref|YP_006722549.1| hypothetical protein B739_0040 [Riemerella anatipestifer RA-CH-1]
gi|403311808|gb|AFR34649.1| hypothetical protein B739_0040 [Riemerella anatipestifer RA-CH-1]
Length = 476
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
+ GG+VRD L+ + DID + G E A VA+ L + + S F
Sbjct: 32 IVGGYVRDLLMKRQVPTDIDFVTEQS-GIELAQAVAKELDSNLKV--SVF---------- 78
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K TA +K L ++FV R E YSE+SR P + G+ E+D RRD TIN++ ++
Sbjct: 79 KTYGTAMIKWKGLELEFVGARKESYSEDSRKPAVEQGSLEDDQKRRDFTINAMAISLGKE 138
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
L G+ DL+ + TPL P T+ DDPLR++RAIRF + +F +++ A
Sbjct: 139 DFGRLVDPFGGVQDLELKTLKTPLEPLQTYSDDPLRMMRAIRFASTLNFKVEQNSLDAIK 198
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ + + +S ER+ E + ++ +P
Sbjct: 199 QEADRIKI---VSMERIMVEFNKIMLSEKP 225
>gi|406928319|gb|EKD64144.1| hypothetical protein ACD_51C00065G0013 [uncultured bacterium]
Length = 434
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 98/213 (46%), Gaps = 26/213 (12%)
Query: 99 AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSG--FGVIPSNPDQS 156
AGG VRD LLG + D DI + K E + T P G FGVI + +
Sbjct: 22 AGGCVRDFLLGHEPKDFDIVT--------SAKPEEIEALLEHTIPVGKEFGVILA-VENG 72
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
H E AT + YS+ R + F AEEDA RRD TIN LFY+
Sbjct: 73 HHFEIATFR-----------SDSGYSDGRRPDAIEFTHAEEDAKRRDFTINGLFYDPIEK 121
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
+ D G DLK I L+D LR++RAIRF DF E KA +
Sbjct: 122 KLYDFI-EGEKDLKDKLIRFIGTAHERILEDHLRIIRAIRFKNTLDFQYHPETYKAVKN- 179
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
A L+AK+S+ER+ E++ M++ VKA+
Sbjct: 180 --HAHLSAKVSKERLRDELNKMLASEHAVKALN 210
>gi|441521726|ref|ZP_21003384.1| putative tRNA nucleotidyltransferase [Gordonia sihwensis NBRC
108236]
gi|441458664|dbj|GAC61345.1| putative tRNA nucleotidyltransferase [Gordonia sihwensis NBRC
108236]
Length = 483
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 27/219 (12%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETA-PSG--FGVIPSN 152
L + GG VRD +LG+ D+D D +AE LS G+ +G FG + +
Sbjct: 42 LYLVGGSVRDAVLGRLAGDLDFTTDAR-----PETIAEILSTWGDAVWDTGIEFGTVSA- 95
Query: 153 PDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFY 211
++ ET ++ R + Y + SR P + FG T E D RRD IN++
Sbjct: 96 ---ARGGET---------VEITTFRSDIYDQQSRNPVVTFGDTLEGDLVRRDFRINAMAV 143
Query: 212 NINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEEL 269
+ ++ G+ADL G I TP P+++F DDPLR+LR +RF ++ F L + +
Sbjct: 144 RLLPGGGQEFCDPLDGMADLLAGVIDTPAAPESSFNDDPLRMLRGVRFVSQLGFRLSDRV 203
Query: 270 KKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
++A A +I+ ER+ E+D M+ G P++A+
Sbjct: 204 RRAIGE---MAGQIERITAERIRVELDKMICGEHPIEAV 239
>gi|313207278|ref|YP_004046455.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|383486593|ref|YP_005395505.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|312446594|gb|ADQ82949.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|380461278|gb|AFD56962.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Riemerella anatipestifer ATCC 11845 = DSM 15868]
Length = 476
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 98 VAGGWVRDKLLGKDC-YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
+ GG+VRD L+ + DID + G E A VA L + + S F
Sbjct: 32 IVGGYVRDLLMKRQVPTDIDFVTEQS-GIELAQAVARELDSNLKV--SVF---------- 78
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
K TA +K L ++FV R E YSE+SR P + G+ E+D RRD TIN++ ++
Sbjct: 79 KTYGTAMIKWKGLELEFVGARKESYSEDSRKPAVEQGSLEDDQKRRDFTINAMAISLGKE 138
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
L G+ DL+ + TPL P T+ DDPLR++RAIRF + +F +++ A
Sbjct: 139 DFGRLVDPFGGVQDLESKILKTPLEPLQTYSDDPLRMMRAIRFASTLNFKVEQNSLDAIK 198
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ + + +S ER+ E + ++ +P
Sbjct: 199 QEADRIKI---VSMERIMVEFNKIMLSEKP 225
>gi|226362873|ref|YP_002780653.1| tRNA nucleotidyltransferase [Rhodococcus opacus B4]
gi|226241360|dbj|BAH51708.1| tRNA nucleotidyltransferase [Rhodococcus opacus B4]
Length = 483
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 104/227 (45%), Gaps = 23/227 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D +V + LS G + + D
Sbjct: 43 LYLVGGSVRDAILGRLGTDLDFTTDAR-----PEQVQKLLS----------GWVDNQWDT 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T + I+ R + Y SR P ++FGT E+D RRD T+N++ I
Sbjct: 88 GIEFGTISAAKAGQQIEITTYRADAYDRVSRNPVVQFGTKLEDDLVRRDFTVNAMAVRIG 147
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+D G+ L G + TP P+ +F DDPLR+LRA RF ++ F L E + A
Sbjct: 148 ADGSQDFVDPLNGMDALLAGMLDTPSAPENSFNDDPLRMLRAARFVSQLGFTLHERVHAA 207
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC--GLTLF 317
A A +I+ ERV E+D ++ G P+ M +C GL F
Sbjct: 208 IAD---MAPQIERITAERVRAELDKLILGEFPIDGMNVMCETGLADF 251
>gi|410867863|ref|YP_006982474.1| tRNA adenylyltransferase [Propionibacterium acidipropionici ATCC
4875]
gi|410824504|gb|AFV91119.1| tRNA adenylyltransferase [Propionibacterium acidipropionici ATCC
4875]
Length = 515
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 113/237 (47%), Gaps = 24/237 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM---------MGSEFATKVAEYLSATGETAPSGF 146
L + GG VRD L+G +D+D D + + G PSG
Sbjct: 51 LYLVGGSVRDALMGTLGHDLDFTSDAHPDEIEKLVRTRTHAVWDIGRQFGTIGCRIPSGG 110
Query: 147 GVIPSNPDQSKHLETATMKLYDLWI-DFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDL 204
G PS + + + D W+ + R + Y +SR P + FG T +ED RRD
Sbjct: 111 GKAPSGGQGA----SDDAEGPDSWVVEITTYRTDVYRPDSRKPEIAFGQTLDEDLIRRDF 166
Query: 205 TINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFI 264
TIN++ + +T + D G+AD+ G + TP PP+ +F DDPLR++RA RF ++ F
Sbjct: 167 TINAMAVHADTRAFVDPHA-GLADIAAGLLRTPFPPQRSFSDDPLRMMRAARFTSQLGFG 225
Query: 265 LDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM-----THICGLTL 316
+ +E+ +AA +D A IS ERV E+ ++ + P + + T I G L
Sbjct: 226 VTDEV-RAAMTD--MAGRIEIISAERVRDELSKLLLTDSPREGLDLLVSTGIAGYVL 279
>gi|345017626|ref|YP_004819979.1| polynucleotide adenylyltransferase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032969|gb|AEM78695.1| Polynucleotide adenylyltransferase region [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 388
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 20/188 (10%)
Query: 83 LLNTLRHFNLETVLR--VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGE 140
L+ L+ +L+T ++ + GG VRD LLG DID+ ++ G EFA + YL
Sbjct: 10 LIKLLKEISLKTKIKSYIVGGVVRDFLLGVKNLDIDVVVEGD-GIEFAYILLSYLKGDIV 68
Query: 141 TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
+ TAT+ + ID ++ R E Y + +PT+ F +D
Sbjct: 69 VYEA--------------FRTATLSYDGISIDIISARKEYYERPAALPTIEFSNIYDDMA 114
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD TIN+L Y++ + D G+ DLK G ++ L PK +F+DDP R+ RAIR+ R
Sbjct: 115 RRDFTINTLAYDVIEEKILDYFN-GLEDLKKG-LIRVLHPK-SFIDDPTRIFRAIRYATR 171
Query: 261 FDFILDEE 268
+ F ++E+
Sbjct: 172 YSFEIEEK 179
>gi|326391069|ref|ZP_08212616.1| Polynucleotide adenylyltransferase region [Thermoanaerobacter
ethanolicus JW 200]
gi|325992854|gb|EGD51299.1| Polynucleotide adenylyltransferase region [Thermoanaerobacter
ethanolicus JW 200]
Length = 388
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 20/188 (10%)
Query: 83 LLNTLRHFNLETVLR--VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGE 140
L+ L+ +L+T ++ + GG VRD LLG DID+ ++ G EFA + YL
Sbjct: 10 LIKLLKEISLKTKIKSYIVGGVVRDFLLGVKNLDIDVVVEGD-GIEFAYILLSYLKGDIV 68
Query: 141 TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
+ TAT+ + ID ++ R E Y + +PT+ F +D
Sbjct: 69 VYEA--------------FRTATLSYDGISIDVISARKEYYERPAALPTIEFSNIYDDMA 114
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD TIN+L Y++ + D G+ DLK G ++ L PK +F+DDP R+ RAIR+ R
Sbjct: 115 RRDFTINTLAYDVIEEKILDYFN-GLEDLKKG-LIRVLHPK-SFIDDPTRIFRAIRYATR 171
Query: 261 FDFILDEE 268
+ F ++E+
Sbjct: 172 YSFEIEEK 179
>gi|227876518|ref|ZP_03994630.1| possible tRNA adenylyltransferase [Mobiluncus mulieris ATCC 35243]
gi|227843059|gb|EEJ53256.1| possible tRNA adenylyltransferase [Mobiluncus mulieris ATCC 35243]
Length = 486
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 27/237 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLG+ +D+D+ + E T + + A + FG I +
Sbjct: 36 LVGGPVRDALLGQAPHDLDLTT-SARPEEIETVLRPWADAVWDVG-RNFGTIGA------ 87
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTS 216
+ D + RC++Y +SR P ++FG T E D +RRD T+N++ +
Sbjct: 88 -------RKGDAIFEITTYRCDEYQRDSRKPLVKFGDTLEGDLWRRDFTVNAMALRLPEM 140
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
++ D TG G DL+ + TP+ P+ +F DDPLR++RA RF A+ F +D + A
Sbjct: 141 TLVDPTG-GERDLEQQMLRTPISPEESFNDDPLRIMRAARFAAQLGFDIDYSVLTAMQDM 199
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
+ + +SRER+ E ++ P + GL L + + QV PE+++
Sbjct: 200 RERLQI---VSRERIQAEFSRLLVSPWPRR------GLELM-VYTDVAAQVVPELMD 246
>gi|150021303|ref|YP_001306657.1| CBS domain-containing protein [Thermosipho melanesiensis BI429]
gi|149793824|gb|ABR31272.1| CBS domain containing protein [Thermosipho melanesiensis BI429]
Length = 859
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 119/231 (51%), Gaps = 25/231 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
+ V GG+VRD LG + +DID+ ++ G EFA VA+ L V+ +
Sbjct: 469 IYVVGGFVRDLFLGIENFDIDLVVEGN-GMEFAKYVAKQLDVK---------VV----EH 514
Query: 156 SKHLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
K L TA++ D + ID R E Y + + +P + T ++D YRRD TIN++ +N
Sbjct: 515 EKFL-TASLFFKDGFRIDVATARTEYYDKPAELPKVDISTIKKDLYRRDFTINAMAIKLN 573
Query: 215 TSS---VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDF-ILDEELK 270
+ + D G DL+ G + + K +F++DP R++RA+RF RFDF I DE L+
Sbjct: 574 SKEFGMLYDFFGSR-KDLEEG--IIRVLHKLSFVEDPTRMVRAVRFEQRFDFRIEDETLE 630
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ ++ +++ +R+ E++ ++ PVK + + L + +F
Sbjct: 631 --ILKETLEGGYLERVTGQRIRQELEKILQEKDPVKGIKRLSELNILNRIF 679
>gi|269977721|ref|ZP_06184681.1| tRNA adenylyltransferase [Mobiluncus mulieris 28-1]
gi|269934025|gb|EEZ90599.1| tRNA adenylyltransferase [Mobiluncus mulieris 28-1]
Length = 486
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 27/237 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLG+ +D+D+ + E T + + A + FG I +
Sbjct: 36 LVGGPVRDALLGQAPHDLDLTT-SARPEEIETVLRPWADAVWDVG-RNFGTIGA------ 87
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTS 216
+ D + RC++Y +SR P ++FG T E D +RRD T+N++ +
Sbjct: 88 -------RKGDAIFEITTYRCDEYQRDSRKPLVKFGDTLEGDLWRRDFTVNAMALRLPEM 140
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
++ D TG G DL+ + TP+ P+ +F DDPLR++RA RF A+ F +D + A
Sbjct: 141 TLVDPTG-GERDLEQQMLRTPISPEESFNDDPLRIMRAARFAAQLGFDIDYSVLTAMQDM 199
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
+ + +SRER+ E ++ P + GL L + + QV PE+++
Sbjct: 200 RERLQI---VSRERIQAEFSRLLVSPWPRR------GLELM-VYTDVAAQVVPELMD 246
>gi|306817479|ref|ZP_07451223.1| tRNA adenylyltransferase [Mobiluncus mulieris ATCC 35239]
gi|304649703|gb|EFM46984.1| tRNA adenylyltransferase [Mobiluncus mulieris ATCC 35239]
Length = 486
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 27/237 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLG+ +D+D+ + E T + + A + FG I +
Sbjct: 36 LVGGPVRDALLGQAPHDLDLTT-SARPEEIETVLRPWADAVWDVG-RNFGTIGA------ 87
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTS 216
+ D + RC++Y +SR P ++FG T E D +RRD T+N++ +
Sbjct: 88 -------RKGDAIFEITTYRCDEYQRDSRKPLVKFGDTLEGDLWRRDFTVNAMALRLPEM 140
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
++ D TG G DL+ + TP+ P+ +F DDPLR++RA RF A+ F +D + A
Sbjct: 141 TLVDPTG-GERDLEQQMLRTPISPEESFNDDPLRIMRAARFAAQLGFDIDYSVLTAMQDM 199
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLE 333
+ + +SRER+ E ++ P + GL L + + QV PE+++
Sbjct: 200 RERLQI---VSRERIQAEFSRLLVSPWPRR------GLELM-VYTDVAAQVVPELMD 246
>gi|379711724|ref|YP_005266929.1| tRNA nucleotidyltransferase [Nocardia cyriacigeorgica GUH-2]
gi|374849223|emb|CCF66299.1| tRNA nucleotidyltransferase [Nocardia cyriacigeorgica GUH-2]
Length = 498
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 105/231 (45%), Gaps = 24/231 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD +LG+ D+D D + A++L TG A FG + +
Sbjct: 58 LYLVGGSVRDAILGRLGTDLDFTTDARPEQVQQMMRGWADHLWDTGGLA---FGTVSAAK 114
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYN 212
D D ++ R + Y SR P + FG T E D RRD T+N++
Sbjct: 115 D-------------DQQLEITTFRSDSYDRVSRNPEVTFGDTLEGDLVRRDFTVNAMAVK 161
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I + G+ L G + TP P+ +F DDPLR+LRA RF ++ F L ++
Sbjct: 162 IGADGALEFVDPLGGMDALLAGVLDTPSAPQESFGDDPLRMLRAARFVSQLGFTLHPRVQ 221
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
A A +I+ ERV TE+D +++G P+ + +C L IV
Sbjct: 222 TAITE---MAGEIERITAERVRTELDKLIAGAHPIDGINIMCETGLAQIVL 269
>gi|91204980|ref|YP_537335.1| poly(A) polymerase [Rickettsia bellii RML369-C]
gi|157827690|ref|YP_001496754.1| poly(A) polymerase [Rickettsia bellii OSU 85-389]
gi|91068524|gb|ABE04246.1| Poly(A) polymerase [Rickettsia bellii RML369-C]
gi|157802994|gb|ABV79717.1| Poly(A) polymerase [Rickettsia bellii OSU 85-389]
Length = 398
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 28/240 (11%)
Query: 97 RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSG--FGVIPSNPD 154
R+ GG VRD LLGK+ YDIDIA N++ +E + +++ A +T P+G FG I + +
Sbjct: 29 RLIGGSVRDALLGKESYDIDIA-TNLLPNEVTSILSQ---AKIKTIPTGLKFGTITAILE 84
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRF-GTAEEDAYRRDLTINSLFYNI 213
+ + T K ++ C N R + F EDA RRD TIN+L Y
Sbjct: 85 KEQFQITTLRK---------DIEC-----NGRHAKVVFTNDFAEDAERRDFTINALSYCP 130
Query: 214 NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+ D G DLK K+V +D LR+LR RF + + L+ E KA
Sbjct: 131 FKGKIYDYFN-GFEDLKQRKVVFIRAAHQRIKEDYLRILRFFRFSSYYANRLNPEGFKAC 189
Query: 274 ASDEVKAALAAKISRERVGTEID-LMVSGNQP--VKAMTHICGLTLFWIVFKLPLQVEPE 330
DE+K+ L + +SRER+ +E D ++VS N P +KAM I L L + + +++ +
Sbjct: 190 --DELKSGLMS-LSRERIKSEFDRIIVSSNSPEVLKAMFEIGILALIFSIQNYEIKIAEQ 246
>gi|406955456|gb|EKD83927.1| hypothetical protein ACD_39C00366G0001, partial [uncultured
bacterium]
Length = 740
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 117/248 (47%), Gaps = 44/248 (17%)
Query: 100 GGWVRDKLLGKDCYDIDIAL--DNM-----MGSEFATKVAEYLSATGETAPSGFGVIPSN 152
GG+VRD LL + +DIDI + D M + EFA + +
Sbjct: 353 GGFVRDLLLERPNFDIDIVVIGDAMPFVAELSREFACEYKVF------------------ 394
Query: 153 PDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYN 212
TA + L DL IDF + R E YS+ +P + F D YRRD TIN+L
Sbjct: 395 ----DRFHTARIYLEDLKIDFSSARIEHYSDPGALPQIEFSGLSNDLYRRDFTINALALA 450
Query: 213 INTS---SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEEL 269
+N ++D G G DL +I + +FL+DP R+ RAIRF RF+F L+++
Sbjct: 451 LNPDHYLELKDFFG-GYHDLISRRIR--ILHSFSFLEDPTRLFRAIRFAGRFNFALEQDT 507
Query: 270 KKA---AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQ 326
++A A S E K+S +R+G EI ++ +P + + + L + + P
Sbjct: 508 QRAFELAISREA----PEKLSLKRIGAEISRCLNEERPQQIVADLFSAGL--MKYLSPEM 561
Query: 327 VEPEVLEG 334
V+ ++L G
Sbjct: 562 VDADILPG 569
>gi|392941027|ref|ZP_10306671.1| tRNA nucleotidyltransferase/poly(A) polymerase [Thermoanaerobacter
siderophilus SR4]
gi|392292777|gb|EIW01221.1| tRNA nucleotidyltransferase/poly(A) polymerase [Thermoanaerobacter
siderophilus SR4]
Length = 388
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 20/188 (10%)
Query: 83 LLNTLRHFNLETVLR--VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGE 140
L+ L+ +L+T ++ + GG VRD LLG DID+ ++ G EFA + YL
Sbjct: 10 LIKLLKEISLKTKIKSYIVGGVVRDFLLGVKNLDIDVVVEGD-GIEFAYILLSYLKGDIV 68
Query: 141 TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
+ TAT+ + ID ++ R E Y + +PT+ F +D
Sbjct: 69 VYEA--------------FRTATLSYDGISIDVISARKEYYERPAVLPTIEFSNIYDDMA 114
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD TIN+L Y++ + D G+ DLK G ++ L PK +F+DDP R+ RAIR+ R
Sbjct: 115 RRDFTINTLAYDVIEEKILDYFN-GLEDLKKG-LIRVLHPK-SFIDDPTRIFRAIRYATR 171
Query: 261 FDFILDEE 268
+ F ++E+
Sbjct: 172 YSFEIEEK 179
>gi|78188698|ref|YP_379036.1| hypothetical protein Cag_0722 [Chlorobium chlorochromatii CaD3]
gi|78170897|gb|ABB27993.1| HDIG [Chlorobium chlorochromatii CaD3]
Length = 476
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG+VRD ++ + C D+DI + FA V E L F ++
Sbjct: 32 LVGGYVRDLMMKRPCTDVDIMITGD-PVPFAHMVQEELQGRNFVLFERF--------RTA 82
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS- 216
LE L ++ V R E Y+ +SR P GT E+D RRD TIN+L +N
Sbjct: 83 QLELDDPNLGTFKVELVGARKESYNSDSRKPITLVGTLEDDLMRRDFTINALAMRLNREE 142
Query: 217 --SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+V DL G+ D++ + TPL P TF DDPLR++RA RF A+ DF L L A
Sbjct: 143 RYTVTDLFN-GMEDMEAKILRTPLEPLQTFSDDPLRMMRAARFAAQLDFTL---LPNALE 198
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ +S ERV E ++ ++P
Sbjct: 199 AIRAMHERIHIVSMERVSHEFLKIMRTHRP 228
>gi|374339212|ref|YP_005095948.1| tRNA nucleotidyltransferase/poly(A) polymerase [Marinitoga
piezophila KA3]
gi|372100746|gb|AEX84650.1| tRNA nucleotidyltransferase/poly(A) polymerase [Marinitoga
piezophila KA3]
Length = 679
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 115/227 (50%), Gaps = 29/227 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LLGK YDIDI ++ G ++A V++YL T + K
Sbjct: 291 VVGGFVRDLLLGKKNYDIDIVIEGD-GLKYAKYVSKYLRTTFV--------------EHK 335
Query: 158 HLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
T ++ D + ID R E Y + + +P + T ++D YRRD +IN++ +N
Sbjct: 336 EFHTGSLFFKDGFRIDIATARVEYYEKPADLPKVEISTIKKDLYRRDFSINAMAIKLNPE 395
Query: 217 SVE---DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDE---ELK 270
D G DL++G + + +F++DP R+LRAIRF RF+F ++E EL
Sbjct: 396 EFGVLFDFFGCQ-NDLENG--IIRILYNLSFIEDPTRILRAIRFERRFNFKIEERTLELM 452
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF 317
K A ++ K++ R+ E++ ++S + ++ + L++F
Sbjct: 453 KEAINNN----YIEKVTGMRLREELEKILSEKNVIDSIIEMGELSIF 495
>gi|289578319|ref|YP_003476946.1| polynucleotide adenylyltransferase region [Thermoanaerobacter
italicus Ab9]
gi|297544599|ref|YP_003676901.1| polynucleotide adenylyltransferase region [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|289528032|gb|ADD02384.1| Polynucleotide adenylyltransferase region [Thermoanaerobacter
italicus Ab9]
gi|296842374|gb|ADH60890.1| Polynucleotide adenylyltransferase region [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 388
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 20/188 (10%)
Query: 83 LLNTLRHFNLETVLR--VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGE 140
L+ L+ +L+T ++ + GG VRD LLG DID+ ++ G EFA + YL
Sbjct: 10 LIRLLKEISLKTKIKSYIVGGVVRDFLLGVKNLDIDVVVEGD-GIEFAYILLSYLKGDIV 68
Query: 141 TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
+ TAT+ ++ ID ++ R E Y + +PT+ F +D
Sbjct: 69 VYEA--------------FRTATLSYHNFSIDIISARKEYYECPAALPTIEFSNIYDDMA 114
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD TIN+L Y++ + D G+ DLK G ++ L K +F+DDP R+ RAIR+ R
Sbjct: 115 RRDFTINALAYDVMEGKILDYFN-GLEDLKKG-VIRVLHSK-SFIDDPTRIFRAIRYATR 171
Query: 261 FDFILDEE 268
+ F ++E+
Sbjct: 172 YSFEIEEK 179
>gi|392964798|ref|ZP_10330218.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Fibrisoma limi BUZ 3]
gi|387846181|emb|CCH52264.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Fibrisoma limi BUZ 3]
Length = 493
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 27/216 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD +L + DID+ +GS A +AE + +T + F
Sbjct: 29 VIGGFVRDLVLKRPSSDIDVVC---LGSGIA--LAEAVGKVLQTNVAVFA---------- 73
Query: 158 HLETATMKLY----DLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNI 213
+ TA ++ + D ++FV R E Y +SR P + GT E+D RRD TIN++ ++
Sbjct: 74 NFGTAMLRTHQDGMDWEVEFVGARKESYRSDSRKPIVEDGTLEDDQNRRDFTINAMGISL 133
Query: 214 NTSSVEDLTG-----RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
N + G+ D+K I TPL P TF DDPLR++RAIRF ++ F ++ +
Sbjct: 134 NHTGGPGFGELIDPFDGLKDIKRKIIRTPLNPDITFSDDPLRMMRAIRFASQLGFDIEPD 193
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
A + + +SRER+ E++ ++ P
Sbjct: 194 TFDAIVRMNERITI---VSRERITDELNKIILSPTP 226
>gi|163782168|ref|ZP_02177167.1| poly A polymerase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882700|gb|EDP76205.1| poly A polymerase [Hydrogenivirga sp. 128-5-R1-1]
Length = 835
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 98/205 (47%), Gaps = 26/205 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLGKD +D+D ++ A +VAE L+ P F
Sbjct: 459 IVGGVVRDILLGKDVWDLDFVIEGD-----AIRVAEELAREHGVQPHPF----------P 503
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
TA +K+ L ++F R E Y P + + +ED RRD TIN++ ++N
Sbjct: 504 EFGTAHVKVGSLKLEFATARRETYPRPGAYPKVEKASLKEDLVRRDFTINAMAISVNPED 563
Query: 218 VEDLTGR--GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD---EELKKA 272
+ L GI DLK KIV L P +F++DP+R+LRA+RF R F L E L K
Sbjct: 564 MGTLIDYFGGIRDLKD-KIVRVLHP-VSFIEDPVRILRALRFAGRLGFKLSKSTERLLKQ 621
Query: 273 AASDEVKAALAAKISRERVGTEIDL 297
A V L + R R+ EI L
Sbjct: 622 A----VNLGLLEEAPRGRIMNEIRL 642
>gi|194336308|ref|YP_002018102.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Pelodictyon phaeoclathratiforme BU-1]
gi|194308785|gb|ACF43485.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Pelodictyon phaeoclathratiforme BU-1]
Length = 479
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 19/199 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSE---FATKVAEYLSATGETAPSGFGVIPSNPD 154
+ GG+VRD ++ + C DIDI M+ + FA V + L+ G I
Sbjct: 29 LVGGYVRDMIMQRACTDIDI----MVTGDPLPFAKAVRDKLN--------GRNFILFERF 76
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
++ LE + ++ V R E Y+ +SR P GT ++D RRD TIN+L +N
Sbjct: 77 RTAQLELSDPIQGSFKVELVGARKESYNNDSRKPVTLIGTLDDDLSRRDFTINALALVLN 136
Query: 215 TSSVEDLTGR--GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + R G+AD++ + TPL P TF DDPLR++RA RF A+ DF L ++ +A
Sbjct: 137 SKERNQIIDRFNGVADIEARILKTPLDPLQTFSDDPLRMMRAARFSAQLDFRLLPDVVEA 196
Query: 273 --AASDEVKAALAAKISRE 289
A + ++ ++S+E
Sbjct: 197 MKAMHERIRIVSIERVSQE 215
>gi|189485160|ref|YP_001956101.1| CCA-adding tRNA nucleotidyltransferase [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287119|dbj|BAG13640.1| CCA-adding tRNA nucleotidyltransferase [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 461
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 155/346 (44%), Gaps = 51/346 (14%)
Query: 98 VAGGWVRDKLLGKDCYDIDIAL----DNM----MGSEFATKVAEYLSATGETAPSGFGVI 149
+ GG+VRD + ++ D+DI + N+ G F+ +A+ FG
Sbjct: 30 IVGGFVRDLFIKREPKDLDIMVCGRGSNLSMQSAGINFSKILAKKYKLDKPVIFERFG-- 87
Query: 150 PSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSL 209
T+ + + ++FV R E Y+ NSR P + + E+DA RRD TIN+L
Sbjct: 88 -----------TSKLFMDSEEVEFVMPRREYYNANSRNPDTQIASVEQDALRRDFTINAL 136
Query: 210 FYNINTSSVEDLTGRGIADLKHG--KIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDE 267
F +N + D T +G+ D+K+ ++ P + F DPLR+LRA+R + DF ++
Sbjct: 137 FLRLNDMKILDFTSQGVVDIKNKIIRVTDPSNIEIIFKQDPLRILRAVRQSVQLDFKIET 196
Query: 268 E----LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
E +K ++ S E+ +S ER+ EI+ ++ P KA + + L
Sbjct: 197 ETYNAMKISSPSIEI-------VSPERIRDEINKILIEKIPSKAFKIMDEIN-------L 242
Query: 324 PLQVEPEV--LEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALFLPFRNTTYK 381
+++ PEV L+ E + D + T + T ND R++ A L + T K
Sbjct: 243 SVKILPEVARLKNLEQLEKYHTDDVFVHTLKVLDRTKNDIILRMA--ALLHDTGKYATCK 300
Query: 382 DNKGKKIPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLV 427
N G+ F A +AE V+ + ++F+ S++
Sbjct: 301 KNGGR------ICFYGHDAESAKEAEAVLKRLKYSKEFIQKTVSVI 340
>gi|444429895|ref|ZP_21225074.1| putative tRNA nucleotidyltransferase [Gordonia soli NBRC 108243]
gi|443888900|dbj|GAC66795.1| putative tRNA nucleotidyltransferase [Gordonia soli NBRC 108243]
Length = 484
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 27/219 (12%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D + + ++ A +T + FG I
Sbjct: 40 LYLVGGSVRDAVLGRLSGDLDFTTD-ARPEQVDELLRDWADARWDTGIA-FGTI------ 91
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+++ DL I+ R + Y SR P +RFG + ++D RRD TIN++ +
Sbjct: 92 -------SVRKGDLIIEITTFRADAYDRVSRNPQVRFGDSLDDDLVRRDFTINAMAVRVG 144
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+D G++ G I TP P+ +F DDPLR+LRAIRF ++ F L +++A
Sbjct: 145 RDGAQDFCDPLDGLSAALAGVIDTPATPEESFADDPLRMLRAIRFVSQLGFRLAPRVQEA 204
Query: 273 AASDEVKAALAAKISR---ERVGTEIDLMVSGNQPVKAM 308
A+A +I R ER+ E+D ++G P++A+
Sbjct: 205 I------TAMAEQIDRITVERIRVELDKTIAGEHPLEAI 237
>gi|282890317|ref|ZP_06298845.1| hypothetical protein pah_c016o016 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338176728|ref|YP_004653538.1| cCA-adding enzyme [Parachlamydia acanthamoebae UV-7]
gi|281499699|gb|EFB41990.1| hypothetical protein pah_c016o016 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336481086|emb|CCB87684.1| cCA-adding enzyme [Parachlamydia acanthamoebae UV-7]
Length = 412
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 21/196 (10%)
Query: 99 AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKH 158
AGGWVRD L+G DIDIA + K+ + T FGV+ + ++
Sbjct: 25 AGGWVRDYLMGHPSSDIDIATNAP-----PEKILDLFPHTLLVG-LAFGVVIVLIEGHQY 78
Query: 159 LETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSV 218
E +T + DF DY + + ++ T +EDA RRD TIN +FY+ ++
Sbjct: 79 -EISTFRQ-----DF------DYLDGRKPSKIQLSTPQEDAKRRDFTINGMFYDPIEDTI 126
Query: 219 EDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEV 278
D RG DL G I T P+ FL+D LR++RAIRF +RF FI+D + ++A E
Sbjct: 127 FDFV-RGAVDLDLGIIRTIGNPQERFLEDRLRMVRAIRFASRFGFIIDTDTQEAII--EN 183
Query: 279 KAALAAKISRERVGTE 294
+ L ++ ER+ E
Sbjct: 184 ASTLFPSVAMERIWQE 199
>gi|310779055|ref|YP_003967388.1| hypothetical protein [Ilyobacter polytropus DSM 2926]
gi|309748378|gb|ADO83040.1| CBS domain containing protein [Ilyobacter polytropus DSM 2926]
Length = 857
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 18/214 (8%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD +LG DIDI ++ G FA + L+ F D+
Sbjct: 475 MVGGIVRDIILGIPNKDIDIVVEGE-GIAFAWDLKNELNGEKIVVHEKFKTAVVIVDK-- 531
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
DL ID R E Y + +P++ +G+ ED YRRD TINSL ++
Sbjct: 532 ----------DLKIDVATSRVEYYEYPTSLPSVDYGSIREDMYRRDFTINSLALEVDYQK 581
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G D+++ +I + +F++DP R++RA RF +R+DF ++EE ++
Sbjct: 582 FGELVDFFNGYRDIQNREI--RILHNFSFVEDPTRIIRAFRFASRYDFKIEEETER-FLK 638
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
D V+ KIS RV E +++ P KA+
Sbjct: 639 DAVENGFLKKISWPRVKNEFKIILGDKNPEKALN 672
>gi|407649573|ref|YP_006813332.1| tRNA nucleotidyltransferase [Nocardia brasiliensis ATCC 700358]
gi|407312457|gb|AFU06358.1| tRNA nucleotidyltransferase [Nocardia brasiliensis ATCC 700358]
Length = 470
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD +LG+ D+D D E A++L TG A FG + S
Sbjct: 30 LYLVGGSVRDAVLGRLGTDLDFTTDARPEQVQELLRGWADHLWDTGGLA---FGTV-SGS 85
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
+ LE T R ++Y SR P + FG + E+D RRD T+N++
Sbjct: 86 KSGQQLEITT------------FRSDNYDRVSRNPEVTFGDSLEDDLVRRDFTVNAMAVR 133
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I D G+ L G + TP P+ +F DDPLR+LRA RF A+ F L ++
Sbjct: 134 IGADGTLDFVDPLNGMDALLAGLLDTPAAPQDSFNDDPLRMLRAARFVAQLGFELHPRVR 193
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
A A +I+ ERV E+D ++ G P+ + +C
Sbjct: 194 AAITE---MAEQIDRITAERVRVELDKLIGGAHPIDGINIMC 232
>gi|111020630|ref|YP_703602.1| tRNA nucleotidyltransferase [Rhodococcus jostii RHA1]
gi|110820160|gb|ABG95444.1| probable tRNA nucleotidyltransferase [Rhodococcus jostii RHA1]
Length = 483
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 103/227 (45%), Gaps = 23/227 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D +V + LS G + D
Sbjct: 43 LYLVGGSVRDAILGRLGTDLDFTTD-----AHPERVQKLLS----------GWADNQWDT 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T + I+ R + Y SR P ++FGT E+D RRD T+N++ I
Sbjct: 88 GIEFGTISAAKAGQQIEITTYRADAYDRVSRNPVVQFGTKLEDDLVRRDFTVNAMAVRIG 147
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+D G+ L G + TP P+ +F DDPLR+LRA RF ++ F L E + +A
Sbjct: 148 ADGSQDFVDPLGGMNALLAGVLDTPSAPENSFNDDPLRMLRAARFVSQLGFTLHERVHQA 207
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC--GLTLF 317
A +I+ ERV E+D ++ G P+ M +C GL F
Sbjct: 208 IVD---MAPQIERITAERVRAELDKLILGEFPIDGMNVMCETGLADF 251
>gi|424859737|ref|ZP_18283719.1| tRNA adenylyltransferase [Rhodococcus opacus PD630]
gi|356661181|gb|EHI41513.1| tRNA adenylyltransferase [Rhodococcus opacus PD630]
Length = 483
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 103/227 (45%), Gaps = 23/227 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D +V + LS G + D
Sbjct: 43 LYLVGGSVRDAILGRLGTDLDFTTD-----AHPERVQKLLS----------GWADNQWDT 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T + I+ R + Y SR P ++FGT E+D RRD T+N++ I
Sbjct: 88 GIEFGTISAAKAGQQIEITTYRADAYDRVSRNPVVQFGTKLEDDLVRRDFTVNAMAVRIG 147
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+D G+ L G + TP P+ +F DDPLR+LRA RF ++ F L E + +A
Sbjct: 148 ADGSQDFVDPLGGMNALLAGVLDTPSAPENSFNDDPLRMLRAARFVSQLGFTLHERVHQA 207
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC--GLTLF 317
A +I+ ERV E+D ++ G P+ M +C GL F
Sbjct: 208 IVD---MAPQIERITAERVRAELDKLILGEFPIDGMNVMCETGLADF 251
>gi|397733668|ref|ZP_10500382.1| tRNA adenylyltransferase [Rhodococcus sp. JVH1]
gi|396930466|gb|EJI97661.1| tRNA adenylyltransferase [Rhodococcus sp. JVH1]
Length = 483
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 103/227 (45%), Gaps = 23/227 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D +V + LS G + D
Sbjct: 43 LYLVGGSVRDAILGRLGTDLDFTTD-----AHPEQVQKLLS----------GWADNQWDT 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T + I+ R + Y SR P ++FGT E+D RRD T+N++ I
Sbjct: 88 GIEFGTISAAKAGQQIEITTYRADAYDRVSRNPVVQFGTKLEDDLVRRDFTVNAMAVRIG 147
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+D G+ L G + TP P+ +F DDPLR+LRA RF ++ F L E + +A
Sbjct: 148 ADGSQDFVDPLGGMNALLAGVLDTPSAPENSFNDDPLRMLRAARFVSQLGFTLHERVHQA 207
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC--GLTLF 317
A +I+ ERV E+D ++ G P+ M +C GL F
Sbjct: 208 IVD---MAPQIERITAERVRAELDKLILGEFPIDGMNVMCETGLADF 251
>gi|114566944|ref|YP_754098.1| polyA polymerase family protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114337879|gb|ABI68727.1| polyA polymerase family protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 880
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 38/272 (13%)
Query: 49 CKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLL 108
C A M E+ P R ++ +R E+ ++ C+ GG+VRD L
Sbjct: 448 CLAIMQERMPSR-LIATLRLAGEIAESIGSRAYCV----------------GGFVRDFFL 490
Query: 109 GKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYD 168
+D+D+ ++ G E A K+A++L + TA + L D
Sbjct: 491 RVPNFDVDLVVEGD-GEELARKMAQHLGGKARI--------------HQRFRTAALMLPD 535
Query: 169 -LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGR--G 225
ID R E Y + +P + + ED YRRD TIN+L +N S DL G
Sbjct: 536 GTKIDIATARTEYYEFPAALPKVEKASIREDMYRRDFTINTLAIALNPDSFGDLIDYFGG 595
Query: 226 IADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAK 285
DL+ G I + +F++DP R++RAIRF R+ F ++++ + A D ++ L K
Sbjct: 596 RKDLEKGLI--RILYNLSFVEDPTRIIRAIRFEQRYKFTIEDDTLR-FAKDAIERRLLGK 652
Query: 286 ISRERVGTEIDLMVSGNQPVKAMTHICGLTLF 317
+S +R+ E+ L++S P+ A+ I + ++
Sbjct: 653 LSYKRIIQELMLLLSEIDPLPALDRIMEIGVW 684
>gi|257125451|ref|YP_003163565.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Leptotrichia buccalis C-1013-b]
gi|257049390|gb|ACV38574.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Leptotrichia buccalis C-1013-b]
Length = 588
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 87 LRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGF 146
L+ N + GG VRDK+L KD D D A D + SE A+Y P
Sbjct: 13 LKQLNKNGTGFLVGGAVRDKILNKDPGDYDFATD-IEYSELKRIFADY-------NPKEM 64
Query: 147 GVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRF-GTAEEDAYRRDL 204
G H +K+ + R E NSR P ++F T EED RRD
Sbjct: 65 GA---------HFGILMIKVNGKSYEIAKFRKETGVYNSRYPKEIKFVKTIEEDLSRRDF 115
Query: 205 TINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFI 264
TINSL YN T V DL G G D+K I PK +D LR+LRA RF ++ F
Sbjct: 116 TINSLAYNEETGIV-DLYG-GKQDIKRKVIRFVGKPKLRIEEDALRILRAFRFISKLGFN 173
Query: 265 LDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIV 320
LD KK A + K KIS+ER+ E+ ++ GN KA+ + L + ++
Sbjct: 174 LD---KKTAEAICNKRKFLTKISKERIFDELSKILMGNFAKKALIEMKKLRVLEMI 226
>gi|184201989|ref|YP_001856196.1| tRNA nucleotidyltransferase [Kocuria rhizophila DC2201]
gi|183582219|dbj|BAG30690.1| tRNA nucleotidyltransferase [Kocuria rhizophila DC2201]
Length = 478
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 113/239 (47%), Gaps = 28/239 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG++ D+D D A + ++ A E FG I
Sbjct: 32 LSLVGGPVRDLLLGREALDLDFTTDASPDQTLAV-IRDWADAHWEIG-RDFGTI------ 83
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
M+ + ++ R E Y SR PT+ FG ED RRD T+N++ +
Sbjct: 84 -------GMRKAGMQLEVTTYRAEAYDPGSRKPTVAFGDDLTEDLRRRDFTVNAMALRLP 136
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ D G GI DL G + TP P+ +F DDPLR++RA RF ++ + E +++A
Sbjct: 137 GLELVDPFG-GIRDLHAGVLRTPGTPEDSFTDDPLRMMRAARFTSQLGLTVAEPVREAM- 194
Query: 275 SDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF-KLP-LQVE 328
A+A +I S ERV E+ +V G P + + + L IV ++P LQ+E
Sbjct: 195 -----TAMAQRIEIVSAERVREELVKLVCGAHPRRGIELMVDTGLAQIVLPEVPALQLE 248
>gi|406986259|gb|EKE06889.1| hypothetical protein ACD_18C00246G0003 [uncultured bacterium]
Length = 494
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 192/427 (44%), Gaps = 80/427 (18%)
Query: 78 KIFSCLLNTLRHFNLETVLRVAGGWVRDKLLG-KDCYDIDIALDNMMGSEFATKVAEYLS 136
KIFS + + ++ GG+VRD LLG K+ DID A+ G EFA K AE
Sbjct: 5 KIFSTIHQISKKEKVDVY--AVGGYVRDLLLGLKNKADIDFAVVGS-GLEFAKKFAENWD 61
Query: 137 ATG--------ETAPSGF----GVIPSNPDQSKHLETATMKLYDLW-IDFVNLRCEDYSE 183
G +TA F + P+ K+ + +K L+ I+F R E Y
Sbjct: 62 EEGTLIEFPDFDTARFVFTRTMDLKVEEPE--KNFDENQIKKEKLFEIEFAGARSEKYES 119
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS----VEDLTGRGIADLKHGKIVTPLP 239
NSR P + + D RRD T+N++ + + +ED G DL+ I TPL
Sbjct: 120 NSRKPQVVATDLKTDLLRRDFTVNAMARKVLATGLSKKIEDYFD-GQKDLEKKIIRTPLD 178
Query: 240 PKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
P TF +DPLR+LRA RF ++ +F +D++ +A +++ + + IS ER+ E ++
Sbjct: 179 PDITFSEDPLRMLRAARFASQLNFEIDKKTYQAIKTNKERLKI---ISAERIQEEFFKLL 235
Query: 300 SGNQPVKAMTHICGLTLFWIVFKLPLQVE--PEVLEGCEMFCTAYLDAAWDLTQLIGSST 357
S +P GL WI+++ L E PEV C++ W + ++ G +
Sbjct: 236 STPKPS------IGL---WILYETGLLEEFLPEV---CDL---------WGVDEVYGHTH 274
Query: 358 FND--------------DQRRLSQYAAL-----------FLPFRNTTY--KDNKGKKIPV 390
N+ ++L +YAAL F+P R + ++ G+KI V
Sbjct: 275 KNNLEHTFKVVDNLAERSDKKLLRYAALMHDIGKPGTKQFVPKRGWAFDMHEHLGRKI-V 333
Query: 391 VNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVPDAS 450
+ + R L+ D E V + R ++ ++L+ ++ V+ +LVD+
Sbjct: 334 RDISKR--LRMSKQDTEYVSKLVRWHQQPIALMDEGITDSPVRRLVVNLQDDLVDLLTLC 391
Query: 451 KLRVLTG 457
+ + TG
Sbjct: 392 RSDITTG 398
>gi|340795970|ref|YP_004761433.1| tRNA nucleotidyltransferase [Corynebacterium variabile DSM 44702]
gi|340535880|gb|AEK38360.1| tRNA nucleotidyltransferase [Corynebacterium variabile DSM 44702]
Length = 542
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 27/211 (12%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LLG+ +D+D D E T + + +++T FG
Sbjct: 91 GGSVRDALLGRLSHDLDFTTDAR--PEVVTGILDEVASTVWDTGIAFG------------ 136
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNINTSSV 218
T + ++ + ++ R + Y +SR P + +GT+ +ED RRD N++ ++
Sbjct: 137 -TVSGLIHGMTVEITTFRADQYDGSSRNPEVTYGTSLDEDLVRRDFRGNAIALELSADGA 195
Query: 219 EDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
+L G+ DL +G + TP P+ +F DDPLR+LRA RF ++ F + ++ A
Sbjct: 196 HELRDPLNGLEDLVNGVLDTPAAPEQSFHDDPLRMLRACRFASQLGFEVAPRVQDAMTR- 254
Query: 277 EVKAALAAKISR---ERVGTEIDLMVSGNQP 304
+AA+I R ERV E+D ++ G +P
Sbjct: 255 -----MAAEIDRITVERVAAELDKLMLGAEP 280
>gi|384107138|ref|ZP_10008040.1| tRNA nucleotidyltransferase [Rhodococcus imtechensis RKJ300]
gi|383833073|gb|EID72542.1| tRNA nucleotidyltransferase [Rhodococcus imtechensis RKJ300]
Length = 483
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 23/227 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D +V + LS G + D
Sbjct: 43 LYLVGGTVRDAILGRLGTDLDFTTD-----AHPERVQKLLS----------GWADNQWDT 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T + ++ R + Y SR P ++FGT E+D RRD T+N++ I
Sbjct: 88 GIEFGTISATKAGQQVEITTYRADAYDRVSRNPVVQFGTKLEDDLVRRDFTVNAMAVRIG 147
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+D G+ L G + TP P+ +F DDPLR+LRA RF ++ F L E + +A
Sbjct: 148 ADGSQDFVDPLGGMDALLAGVLDTPSAPENSFNDDPLRMLRAARFVSQLGFTLHERVHQA 207
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC--GLTLF 317
A +I+ ERV E+D ++ G P+ M +C GL F
Sbjct: 208 IVD---MAPQIERITAERVRAELDKLILGEFPIDGMNVMCETGLADF 251
>gi|419967591|ref|ZP_14483479.1| tRNA nucleotidyltransferase [Rhodococcus opacus M213]
gi|414567099|gb|EKT77904.1| tRNA nucleotidyltransferase [Rhodococcus opacus M213]
Length = 483
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 23/227 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D +V + LS G + D
Sbjct: 43 LYLVGGTVRDAILGRLGTDLDFTTD-----AHPERVQKLLS----------GWADNQWDT 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T + ++ R + Y SR P ++FGT E+D RRD T+N++ I
Sbjct: 88 GIEFGTISATKAGQQVEITTYRADAYDRVSRNPVVQFGTKLEDDLVRRDFTVNAMAVRIG 147
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+D G+ L G + TP P+ +F DDPLR+LRA RF ++ F L E + +A
Sbjct: 148 ADGSQDFVDPLGGMDALLAGVLDTPSAPENSFNDDPLRMLRAARFVSQLGFTLHERVHQA 207
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC--GLTLF 317
A +I+ ERV E+D ++ G P+ M +C GL F
Sbjct: 208 IVD---MAPQIERITAERVRAELDKLILGEFPIDGMNVMCETGLADF 251
>gi|432343483|ref|ZP_19592652.1| tRNA nucleotidyltransferase [Rhodococcus wratislaviensis IFP 2016]
gi|430771492|gb|ELB87351.1| tRNA nucleotidyltransferase [Rhodococcus wratislaviensis IFP 2016]
Length = 483
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 23/227 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D +V + LS G + D
Sbjct: 43 LYLVGGTVRDAILGRLGTDLDFTTD-----AHPERVQKLLS----------GWADNQWDT 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T + ++ R + Y SR P ++FGT E+D RRD T+N++ I
Sbjct: 88 GIEFGTISATKAGQQVEITTYRADAYDRVSRNPVVQFGTKLEDDLVRRDFTVNAMAVRIG 147
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+D G+ L G + TP P+ +F DDPLR+LRA RF ++ F L E + +A
Sbjct: 148 ADGSQDFVDPLGGMDALLAGVLDTPSAPENSFNDDPLRMLRAARFVSQLGFTLHERVHQA 207
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC--GLTLF 317
A +I+ ERV E+D ++ G P+ M +C GL F
Sbjct: 208 IVD---MAPQIERITAERVRAELDKLILGEFPIDGMNVMCETGLADF 251
>gi|188586271|ref|YP_001917816.1| hypothetical protein Nther_1654 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350958|gb|ACB85228.1| CBS domain containing protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 890
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 112/226 (49%), Gaps = 21/226 (9%)
Query: 99 AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKH 158
GG++RD LLGKD DID+ ++ S FA V+++L+ +T
Sbjct: 492 VGGFIRDLLLGKDNLDIDLVIEQDAIS-FAKLVSKHLNGDLKTFS--------------Q 536
Query: 159 LETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+TA + L IDF R E Y+ + P + T ++D YRRD TIN+L +N +S
Sbjct: 537 FQTARLTLRSGTRIDFATARIEYYAFPAASPEVEESTIKQDLYRRDFTINTLAVELNCNS 596
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
L G DLK G V + +F++DP R+ RAIRF +RF+F ++E+
Sbjct: 597 FGKLLDFFGGTKDLKKG--VIRVLYNLSFVEDPTRIFRAIRFESRFNFNIEEQ-TLIFIK 653
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ ++ + K+ ER+ E+ +V ++ V + L +F +F
Sbjct: 654 NSLETGVLDKLPGERLYEELRNIVDEDEAVNTFRRMDELGIFTKIF 699
>gi|256752052|ref|ZP_05492920.1| Polynucleotide adenylyltransferase region [Thermoanaerobacter
ethanolicus CCSD1]
gi|256749062|gb|EEU62098.1| Polynucleotide adenylyltransferase region [Thermoanaerobacter
ethanolicus CCSD1]
Length = 388
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 20/188 (10%)
Query: 83 LLNTLRHFNLETVLR--VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGE 140
L+ L+ + +T ++ + GG VRD LLG DID+ ++ G EFA + YL
Sbjct: 10 LIKLLKEISSKTKIKSYIVGGVVRDFLLGVKNLDIDVVVEGD-GIEFAYILLSYLKGDIV 68
Query: 141 TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
+ TAT+ + ID ++ R E Y + +PT+ F +D
Sbjct: 69 VYEA--------------FRTATLSYDGISIDVISARKEYYERPAALPTIEFSNIYDDMA 114
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD TIN+L Y++ + D G+ DLK G ++ L PK +F+DDP R+ RAIR+ R
Sbjct: 115 RRDFTINTLAYDVIEEKILDYFN-GLEDLKKG-LIRVLHPK-SFIDDPTRIFRAIRYATR 171
Query: 261 FDFILDEE 268
+ F ++E+
Sbjct: 172 YSFEIEEK 179
>gi|302870711|ref|YP_003839348.1| tRNA adenylyltransferase [Micromonospora aurantiaca ATCC 27029]
gi|315506948|ref|YP_004085835.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Micromonospora sp. L5]
gi|302573570|gb|ADL49772.1| tRNA adenylyltransferase [Micromonospora aurantiaca ATCC 27029]
gi|315413567|gb|ADU11684.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Micromonospora sp. L5]
Length = 486
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV----AEYLSATGETAPSGFGVIPS 151
L + GG VRD LLG+ D+D D + KV AE + TG FG I
Sbjct: 47 LHLVGGSVRDALLGRLGNDLDFCTDAH--PDETIKVIRGWAESIWETGRE----FGTIAC 100
Query: 152 NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLF 210
D L ++ R E Y + SR P +++GT+ ED RRD T+N++
Sbjct: 101 QRD-------------GLNLEITTFRAEVYDQVSRNPVVQYGTSLTEDLKRRDFTVNAMA 147
Query: 211 YNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
++ D G G+ADL I TP P+ +F DDPLR+LRA RF A+ F + +++
Sbjct: 148 VSLPDHRFTDPYG-GLADLAAKIIRTPGTPQESFRDDPLRMLRAARFAAQLRFAVHPDVR 206
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
AA E+ A L +I+ ER+ E ++ G P+ +
Sbjct: 207 --AAMTEMAADL-DRITAERIRDEFTKLLCGADPITGL 241
>gi|227541389|ref|ZP_03971438.1| possible tRNA adenylyltransferase [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227182940|gb|EEI63912.1| possible tRNA adenylyltransferase [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 477
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 121/256 (47%), Gaps = 26/256 (10%)
Query: 57 EPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDID 116
+P P + + IEL + +I + L E L + GG VRD LLG+ D+D
Sbjct: 2 KPMLPTSGNISEVIEL-EPYKEILTSLAGEFNRHGEE--LYLVGGSVRDSLLGRLAGDLD 58
Query: 117 IALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNL 176
+ ++E+ A +T +G I + D + ++
Sbjct: 59 FTTSALPDITHDI-LSEWADAVWDTGIE-YGTISAAKDGQQ-------------VEITTF 103
Query: 177 RCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTSSVE---DLTGRGIADLKHG 232
R + Y NSR P ++FG T E D RRD TIN++ ++ + D G G+ L++
Sbjct: 104 RADTYDGNSRNPVVKFGDTLEGDLVRRDFTINAMAIALSPTGDHTFCDPLG-GLTALQNR 162
Query: 233 KIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVG 292
I TP P+ +F DDPLR+LRA RF A+ +F + + A + AA +I+RER+
Sbjct: 163 IIDTPDAPEISFGDDPLRMLRAARFAAQLEFDVATRVVDAMTT---MAAEIDRITRERIQ 219
Query: 293 TEIDLMVSGNQPVKAM 308
TE+D ++ G P + +
Sbjct: 220 TELDKLICGAAPWRGI 235
>gi|385651580|ref|ZP_10046133.1| putative RNA nucleotidyltransferase [Leucobacter chromiiresistens
JG 31]
Length = 481
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 103/214 (48%), Gaps = 28/214 (13%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNP-DQSKH 158
GG VRD LLG+ D+D F T SA + + I +N D +
Sbjct: 31 GGPVRDALLGRPVTDLD----------FTT------SAHPDETRAVLDAISTNVWDVGRD 74
Query: 159 LETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTSS 217
T + ++ R E Y ++SR P +RFG T E D RRD TIN+L +
Sbjct: 75 FGTIAANVLGETVEITTYRAETYRDDSRKPEVRFGKTIEGDLVRRDFTINALALMLPEMR 134
Query: 218 VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDE 277
+ D++G G+ DL +I TP P+ +F DDPLR+LRA RF A+ F +D AA+
Sbjct: 135 LVDVSG-GLEDLLAERIRTPGAPEESFTDDPLRMLRAARFSAQLGFEVD------AATRA 187
Query: 278 VKAALAAK---ISRERVGTEIDLMVSGNQPVKAM 308
A LA + IS ER+ E ++S P+ +
Sbjct: 188 SMAELAERLDIISAERIRDEFVKLLSARDPLPGI 221
>gi|452910742|ref|ZP_21959420.1| tRNA nucleotidyltransferase [Kocuria palustris PEL]
gi|452834163|gb|EME36966.1| tRNA nucleotidyltransferase [Kocuria palustris PEL]
Length = 469
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 21/247 (8%)
Query: 77 TKIFSCLLNTLRHF-NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYL 135
+ + S +L R F + L + GG VRD LG+ D+D D A V +
Sbjct: 8 SAVPSVVLEAGRRFADAGHDLSLVGGPVRDLFLGRVATDLDFTTDATPDQTLAA-VRGWA 66
Query: 136 SATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA 195
AT E FG I M+ D ++ R E Y +SR P + FG +
Sbjct: 67 DATWEIG-RDFGTI-------------GMRRGDQQLEITTYRAEAYDPSSRKPIVAFGDS 112
Query: 196 -EEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRA 254
E+D RRD TIN++ + + + D G G+ DL G + TP P ++F DDPLR++RA
Sbjct: 113 LEDDLVRRDFTINAMALRLPSMELVDPHG-GVRDLAAGVLRTPGSPHSSFDDDPLRMMRA 171
Query: 255 IRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGL 314
RF ++ D + E+ AA E+ L +S ERV E+ ++ G P + + +
Sbjct: 172 ARFASQLDLQVAPEV--LAAMTEMSQRLEI-VSAERVREELIKLLCGRAPRRGVEIMVDT 228
Query: 315 TLFWIVF 321
L +V
Sbjct: 229 GLADVVL 235
>gi|406907117|gb|EKD48048.1| metal dependent phosphohydrolase, partial [uncultured bacterium]
Length = 216
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 99 AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSG--FGVIPSNPDQS 156
AGG VRD LLG D DI + K E T P G FGVI + +
Sbjct: 22 AGGCVRDMLLGTQPKDYDIVT--------SAKPDEIEKLLEHTIPIGKEFGVILAVKN-G 72
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
H E AT + YS+ R + F AE+DA RRD TIN LF++
Sbjct: 73 HHFEIATFR-----------SDSGYSDGRRPDAITFTHAEDDAKRRDFTINGLFFDPIEK 121
Query: 217 SVEDLTG--RGIADLKHGKIVTPL-PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+ D R IAD KI+ + P L+D LR++RAIRF + DF + KA
Sbjct: 122 KLHDFVDGKRDIAD----KIIKFIGDPHERILEDHLRIIRAIRFKSTLDFQYHPDTYKAI 177
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
+ L+AK+S ER+ E++ M++G+ P++A +
Sbjct: 178 KH---HSHLSAKVSGERLRDELNKMIAGDNPIRAFS 210
>gi|404217301|ref|YP_006671523.1| tRNA nucleotidyltransferase/poly(A) polymerase [Gordonia sp. KTR9]
gi|403648100|gb|AFR51340.1| tRNA nucleotidyltransferase/poly(A) polymerase [Gordonia sp. KTR9]
Length = 512
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 21/216 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D V++ L G + D
Sbjct: 71 LYLVGGSVRDAVLGRLGNDLDFTTDAR-----PEAVSQLLR----------GWADAFWDV 115
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T ++ D I+ R + Y + SR P + FGT+ E+D RRD T+N++ I
Sbjct: 116 GIEFGTVGVRKGDHLIEITTFRADSYDQVSRNPEVTFGTSLEDDLIRRDFTVNAMAVQIG 175
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+S +D G+ L G I TP P+ +F DDPLR+LRA+RF ++ F L + +A
Sbjct: 176 SSGAQDFRDPLDGLTALLSGIIDTPATPEQSFGDDPLRMLRAVRFVSQLGFRLAPRVWQA 235
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
E+ + +I+ ER+ TE+D ++ G P++A+
Sbjct: 236 IT--EMNGEI-DRITVERIRTELDKLICGEFPIEAI 268
>gi|359765322|ref|ZP_09269153.1| putative tRNA nucleotidyltransferase [Gordonia polyisoprenivorans
NBRC 16320]
gi|378720477|ref|YP_005285366.1| tRNA nucleotidyltransferase [Gordonia polyisoprenivorans VH2]
gi|359317256|dbj|GAB21986.1| putative tRNA nucleotidyltransferase [Gordonia polyisoprenivorans
NBRC 16320]
gi|375755180|gb|AFA76000.1| tRNA nucleotidyltransferase [Gordonia polyisoprenivorans VH2]
Length = 490
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 21/216 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D KV E LS +T D
Sbjct: 46 LYLVGGSVRDAVLGRLGTDLDFTTDAR-----PEKVQELLSGWADTIW----------DT 90
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T + + DL ++ R E Y R P + FG + ++D RRD TIN++ I
Sbjct: 91 GIEFGTISARRKDLILEITTYRAEKYDGVGRNPEVTFGDSIDDDLVRRDFTINAMAVRIG 150
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ ++ G++ G I TP P+ +F DDPLR+LRA+RF ++ F D + A
Sbjct: 151 RAGAQEFHDPLDGLSAALAGIIDTPATPQESFGDDPLRMLRAVRFVSQLGF--DVAPRVA 208
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
AA ++ A +I+ ERV E+D M++G P++A+
Sbjct: 209 AAITDM-AEQIDRITPERVRVELDKMITGAHPIEAI 243
>gi|148269360|ref|YP_001243820.1| CBS domain-containing protein [Thermotoga petrophila RKU-1]
gi|147734904|gb|ABQ46244.1| CBS domain containing protein [Thermotoga petrophila RKU-1]
Length = 863
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LLG + DIDI ++ A + AEY +P +
Sbjct: 474 VVGGFVRDLLLGIENLDIDIVVEGN-----ALEFAEYAKR----------FLPGKLVKHD 518
Query: 158 HLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA++ L L ID R E Y +++P + T ++D YRRD TIN++ +N+
Sbjct: 519 KFMTASLFLKGGLRIDIATARLEYYESPAKLPDVEMSTIKKDLYRRDFTINAMAIKLNSK 578
Query: 217 S---VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+ D G G DLK G V + +F+DDP R+LRA+RF RFDF + EE +
Sbjct: 579 DFGLLIDFFG-GYRDLKEG--VIRVLHTLSFVDDPTRILRAVRFEQRFDFRI-EETTERL 634
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
V+ + + R+ E++ ++ P+K++ +
Sbjct: 635 LKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSIRRMA 673
>gi|453381325|dbj|GAC83988.1| putative tRNA nucleotidyltransferase [Gordonia paraffinivorans NBRC
108238]
Length = 475
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 25/218 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D E T++ + + FG + +
Sbjct: 32 LYLVGGSVRDAVLGRLGNDLDFTTDAR--PEQVTRLLKGWADAFWDVGIEFGTVGVR--K 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
+HL I+ R + Y + SR P + FG T E+D RRD T+N++ I
Sbjct: 88 GEHL-----------IEITTFRADTYDQVSRNPEVTFGDTLEDDLVRRDFTVNAMAVRIG 136
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
ED G++ L G I TP P+ +F DDPLR+LRA+RF ++ F L + +A
Sbjct: 137 PKGAEDFCDPLDGMSALLAGVIDTPATPEQSFGDDPLRMLRAVRFISQLGFELAPRVWQA 196
Query: 273 --AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+DE++ +I+ ERV E+D ++ G P++A+
Sbjct: 197 ITEMNDEIE-----RITAERVRAELDKLICGEHPLEAI 229
>gi|366162347|ref|ZP_09462102.1| polynucleotide adenylyltransferase region [Acetivibrio
cellulolyticus CD2]
Length = 879
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 114/241 (47%), Gaps = 34/241 (14%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT---GETAPSGFGVIPSNPD 154
V GG+VRD +LG + DIDI ++ FA K AE A E + + V+
Sbjct: 483 VVGGFVRDLILGVENLDIDIVVEGD-AIAFARKFAETSKAVLTEYEKFQTAYAVLAE--- 538
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
DL ID V R E Y +P++ G+ ++D +RRD TIN + +N
Sbjct: 539 -------------DLKIDIVTARKEYYEFPGALPSVERGSIKDDLFRRDFTINCIAMKLN 585
Query: 215 T---SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
+ D G G DL G + + +F++DP R+LRA+RF R+ F +DE+ ++
Sbjct: 586 GREFGKIVDFYG-GRRDLYDG--IIRILYNFSFIEDPTRILRAVRFEQRYGFKMDEKTEE 642
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEV 331
A D + + + K+SRER+ +E M+ V + + L L ++ PE+
Sbjct: 643 FAI-DAINSDVLDKLSRERINSEFFYMLKEKNTVIMLERMQELGLLEKIY-------PEI 694
Query: 332 L 332
+
Sbjct: 695 M 695
>gi|383787052|ref|YP_005471621.1| tRNA nucleotidyltransferase/poly(A) polymerase [Fervidobacterium
pennivorans DSM 9078]
gi|383109899|gb|AFG35502.1| tRNA nucleotidyltransferase/poly(A) polymerase [Fervidobacterium
pennivorans DSM 9078]
Length = 891
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 21/227 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LL YDIDI ++ G EFA A+ L+A V+P +
Sbjct: 490 VVGGFVRDLLLNIPNYDIDIVVEGN-GIEFAKYAAKQLNAI---------VVPY-----E 534
Query: 158 HLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TAT+ D + ID R E Y + +P + T ++D YRRD TIN++ +N +
Sbjct: 535 KFYTATLVFKDGFKIDVATARTEYYEKPGDLPQVDVSTIKKDLYRRDFTINAMAIKLNPN 594
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
L DL+ G + + +F++DP R++RA+RF R++F ++E +
Sbjct: 595 EFGVLYDFFNCQKDLEEG--IIRILHNLSFIEDPTRMIRAVRFETRYNFKIEEHTLEILK 652
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ ++A ++S R+ EI+ ++ QP+ A+ + L + +F
Sbjct: 653 RN-LEANYLERVSGARIRQEIEKILEEKQPLVAVRRLAELGILKHIF 698
>gi|261278704|pdb|3H38|A Chain A, The Structure Of Cca-Adding Enzyme Apo Form Ii
gi|261278705|pdb|3H39|A Chain A, The Complex Structure Of Cca-Adding Enzyme With Atp
gi|261278706|pdb|3H39|B Chain B, The Complex Structure Of Cca-Adding Enzyme With Atp
gi|261278707|pdb|3H3A|A Chain A, The Complex Structure Of Cca-Adding Enzyme With Ctp
gi|261278708|pdb|3H3A|B Chain B, The Complex Structure Of Cca-Adding Enzyme With Ctp
Length = 441
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 23/219 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LLG DIDI ++ A + AEY +P +
Sbjct: 39 VVGGFVRDLLLGIKNLDIDIVVEGN-----ALEFAEYAKR----------FLPGKLVKHD 83
Query: 158 HLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA++ L L ID R E Y +++P + T ++D YRRD TIN++ +N
Sbjct: 84 KFMTASLFLKGGLRIDIATARLEYYESPAKLPDVEMSTIKKDLYRRDFTINAMAIKLNPK 143
Query: 217 SVE---DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
D G G DLK G V + +F+DDP R+LRAIRF RFDF + EE +
Sbjct: 144 DFGLLIDFFG-GYRDLKEG--VIRVLHTLSFVDDPTRILRAIRFEQRFDFRI-EETTERL 199
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
V+ + + R+ E++ ++ P+K++ +
Sbjct: 200 LKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSIRRMA 238
>gi|333897046|ref|YP_004470920.1| polynucleotide adenylyltransferase [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112311|gb|AEF17248.1| Polynucleotide adenylyltransferase region [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 394
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 37/233 (15%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG+VRDKLL + DIDI ++ G +FA + E L+ E
Sbjct: 22 IVGGYVRDKLLNLESDDIDITVEGD-GIKFAFMLNEILNGDIEVHDK------------- 67
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
ETA +K D +D V+ R E Y +P ++ + +D RRD TIN L ++ T+
Sbjct: 68 -FETAKIKTRDFELDIVSARKEHYERPGMLPVVQRASLADDIKRRDFTINMLALDVKTNQ 126
Query: 218 VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE----LKKAA 273
+ D+ G D+K+ K++ + K +F+DDP R+ RAIR+ R F +++ L+K+
Sbjct: 127 IIDIYN-GADDIKN-KLIRVVHDK-SFVDDPTRIFRAIRYSGRLGFKIEQHTEWLLRKSI 183
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQP---VKAMTH-------ICGLTL 316
+ ++ +S +R+ EI L++ P VK M + CG+ +
Sbjct: 184 SDGDI-----FNVSADRIMNEIYLILKEKNPEPIVKLMKYYQLDKELFCGIKI 231
>gi|320354996|ref|YP_004196335.1| polunucleotide adenylyltransferase region [Desulfobulbus
propionicus DSM 2032]
gi|320123498|gb|ADW19044.1| Polynucleotide adenylyltransferase region [Desulfobulbus
propionicus DSM 2032]
Length = 901
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 126/285 (44%), Gaps = 45/285 (15%)
Query: 37 TVNTTRNLGFLRCKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVL 96
+V TRNLG ++ Q PR + V +R E+ +T + C N
Sbjct: 462 SVERTRNLG------SIMAQVLPREITVLLR---EIGET-AAVLGC--NAY--------- 500
Query: 97 RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAP-SGFGVIPSN-PD 154
VAGG+VRD LL DIDI ++ G FA +AE G P FG PD
Sbjct: 501 -VAGGFVRDLLLHVRNTDIDIVIEGD-GIRFAKTLAE--QRHGVVHPHEKFGTATVIFPD 556
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
QS+ +D R E Y + +PT+ + + D YRRD TIN++ ++N
Sbjct: 557 QSR-------------VDVATARLEYYEHPAALPTVEHSSIKLDLYRRDFTINAMAIHLN 603
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
L DLK +I + +F++DP R+ RAIRF R DF + +K
Sbjct: 604 PERFGTLVDYFNCQNDLKERRI--QVLHNLSFVEDPTRIFRAIRFEGRLDFTITRHAEK- 660
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF 317
+ V+ L K+ R E+ L++S + P+ A+ + LF
Sbjct: 661 LIKNTVQMNLFEKVEEPRFFHELKLILSEDDPIPALRRMAQFKLF 705
>gi|139436923|ref|ZP_01771083.1| Hypothetical protein COLAER_00056 [Collinsella aerofaciens ATCC
25986]
gi|133776570|gb|EBA40390.1| HDIG domain protein [Collinsella aerofaciens ATCC 25986]
Length = 464
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 28/214 (13%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATG-ETAPSG--FGVIPSNPDQS 156
GGWVRD L+G +D+D+ + A L A G SG FG I + D
Sbjct: 33 GGWVRDALMGYPSHDVDMCCSGLWQESKAA-----LEAAGIAVVESGIKFGGITAISDGE 87
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTM--RFGTAEEDAYRRDLTINSLFYNIN 214
+ I+ R + + + R P R + E+D RRD T+N++ ++
Sbjct: 88 R-------------IEVTTYRLDGFYTDGRHPQSVERAASLEDDLARRDFTVNAMAWHPE 134
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
V+ G+G DL+ I PK F +D LR+LRA+RF R DF+++ E K+A A
Sbjct: 135 RGLVDRYDGQG--DLERKLIRAVGDPKRRFNEDALRMLRAVRFACRLDFMIEPETKRALA 192
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A L ++RERVG E++ ++S AM
Sbjct: 193 E---CAPLLDAVARERVGIELEGILSTGHGGDAM 223
>gi|325109887|ref|YP_004270955.1| polynucleotide adenylyltransferase [Planctomyces brasiliensis DSM
5305]
gi|324970155|gb|ADY60933.1| Polynucleotide adenylyltransferase region [Planctomyces
brasiliensis DSM 5305]
Length = 426
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 88 RHFNLETVLRV---------AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT 138
R F +E V R+ AGG VRD LL + D D+A D A
Sbjct: 6 RQFAVEVVQRLVEAGYQALWAGGCVRDFLLEGEPADFDVATDARPDQVRKLFGRRRTLAV 65
Query: 139 GETAPSGFGVIPS-NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEE 197
GE+ FGVI P ++ +E AT + YS+ R + F T +E
Sbjct: 66 GES----FGVIIVLGPKEAGQVEVATFRTD-----------ATYSDGRRPDAITFSTPQE 110
Query: 198 DAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRF 257
DA RRD TIN +FY+ + D G G +DL+ + P A +D LR+LRA+RF
Sbjct: 111 DALRRDFTINGMFYDPLAEELIDYVG-GQSDLEARIVRAIGDPHARIEEDKLRMLRALRF 169
Query: 258 GARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
ARFDF+LDE A + + + +S+ER+ E M+ + M I
Sbjct: 170 AARFDFVLDEATMLAIRTHGPQIEV---VSQERITDEFRKMLRHPSRARGMEMIA 221
>gi|354558262|ref|ZP_08977518.1| Polynucleotide adenylyltransferase region [Desulfitobacterium
metallireducens DSM 15288]
gi|353548987|gb|EHC18431.1| Polynucleotide adenylyltransferase region [Desulfitobacterium
metallireducens DSM 15288]
Length = 851
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 107/232 (46%), Gaps = 22/232 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSN-PDQS 156
+ GG+VRD LL D+D ++ G FA + E L + T FG PD++
Sbjct: 480 IIGGFVRDLLLLTPTQDLDFVVEGN-GHAFAQALFEELGSGQLTLHEQFGTARIEFPDET 538
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
HL+ A R E Y +P + +D +RRD TIN++ IN+
Sbjct: 539 -HLDVA------------GTRWEYYEYPGALPQVEESRLRDDLFRRDFTINAMALAINSE 585
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+L G+ DLK G+I +F++DP R+LRAIRF R+ F L +E +
Sbjct: 586 HYGELVDFYGGLRDLKQGEI--RFIHHLSFIEDPTRILRAIRFAERYGFQLSKETLEGVE 643
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF--WIVFKLP 324
+ +KA + K+S ER EI LM+ K + L +F W KLP
Sbjct: 644 T-ALKAGVLKKVSIERFTQEILLMLHEKHFPKMGESLVELGVFEEWFGEKLP 694
>gi|377569828|ref|ZP_09798982.1| putative tRNA nucleotidyltransferase [Gordonia terrae NBRC 100016]
gi|377532908|dbj|GAB44147.1| putative tRNA nucleotidyltransferase [Gordonia terrae NBRC 100016]
Length = 488
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 21/221 (9%)
Query: 91 NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIP 150
N L + GG VRD +LG+ D+D D V++ L G
Sbjct: 42 NAGHELYLVGGSVRDAILGRLGNDLDFTTDAR-----PEAVSQLLR----------GWAD 86
Query: 151 SNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSL 209
+ D T ++ D I+ R + Y + SR P + FG + E+D RRD T+N++
Sbjct: 87 AFWDVGIEFGTVGVRKGDHLIEITTFRADAYDQVSRNPDVTFGESLEDDLIRRDFTVNAM 146
Query: 210 FYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDE 267
I +S +D G+ L G I TP P+ +F DDPLR+LRA+RF ++ F L
Sbjct: 147 AVQIGSSGAQDFCDPLDGLTALLAGVIDTPATPEQSFGDDPLRMLRAVRFVSQLGFRLAP 206
Query: 268 ELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+ +A E+ + +I+ ERV TE+D ++ G P++A+
Sbjct: 207 RVWQAIT--EMNGEI-ERITVERVRTELDKLICGEFPIEAL 244
>gi|167040202|ref|YP_001663187.1| polynucleotide adenylyltransferase [Thermoanaerobacter sp. X514]
gi|300914286|ref|ZP_07131602.1| Polynucleotide adenylyltransferase region [Thermoanaerobacter sp.
X561]
gi|307724478|ref|YP_003904229.1| polynucleotide adenylyltransferase region [Thermoanaerobacter sp.
X513]
gi|166854442|gb|ABY92851.1| Polynucleotide adenylyltransferase region [Thermoanaerobacter sp.
X514]
gi|300889221|gb|EFK84367.1| Polynucleotide adenylyltransferase region [Thermoanaerobacter sp.
X561]
gi|307581539|gb|ADN54938.1| Polynucleotide adenylyltransferase region [Thermoanaerobacter sp.
X513]
Length = 388
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 20/188 (10%)
Query: 83 LLNTLRHFNLETVLR--VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGE 140
L+ L+ + +T ++ + GG VRD LLG DID+ ++ G +FA + YL G+
Sbjct: 10 LIKLLKEISSKTKIKSYIVGGVVRDFLLGVKNLDIDVVVEGD-GIKFAYTLLSYLK--GD 66
Query: 141 TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
+ TAT+ + ID ++ R E Y + +PT+ F +D
Sbjct: 67 IVVY------------EAFRTATLSYDSISIDVISARKEYYERPAALPTIEFSNIYDDMA 114
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD TIN+L Y++ + D G+ DLK G + L PK +F+DDP R+ RAIR+ R
Sbjct: 115 RRDFTINTLAYDVIEEKILDYFN-GLEDLKKG-FIRVLHPK-SFIDDPTRIFRAIRYATR 171
Query: 261 FDFILDEE 268
+ F ++E+
Sbjct: 172 YSFEIEEK 179
>gi|422389346|ref|ZP_16469443.1| tRNA adenylyltransferase [Propionibacterium acnes HL103PA1]
gi|327328873|gb|EGE70633.1| tRNA adenylyltransferase [Propionibacterium acnes HL103PA1]
Length = 507
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + ++ AT + FG I + D
Sbjct: 67 LYLVGGSVRDALMGRLGHDLDFTTDARPDGTEAI-LRQHTHATWDIG-RAFGTIGAQID- 123
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T E+D RRD T+N++ +
Sbjct: 124 ------------DWVVEVTTYRADAYHPDSRKPEIVYGETLEDDLIRRDFTVNAMALHAA 171
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+ D+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 172 TRTFSDPYA-GLTDIVSGILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 229
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 230 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 261
>gi|395237846|ref|ZP_10415860.1| poly(A) polymerase [Turicella otitidis ATCC 51513]
gi|423351882|ref|ZP_17329513.1| tRNA adenylyltransferase [Turicella otitidis ATCC 51513]
gi|394486827|emb|CCI83948.1| poly(A) polymerase [Turicella otitidis ATCC 51513]
gi|404386056|gb|EJZ81230.1| tRNA adenylyltransferase [Turicella otitidis ATCC 51513]
Length = 497
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLG+ +D+D S V LS+ + P+ D
Sbjct: 53 LVGGSVRDALLGRLGHDLDFTT-----SARPEAVRGILSS----------LTPAVWDTGI 97
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTS 216
T + +L ++ R + Y SR P + FG T E D RRD +N+L +
Sbjct: 98 EFGTVSAELNGQQVEITTFRADQYDGESRNPEVSFGDTLEGDLVRRDFKVNALAIELRPG 157
Query: 217 SVEDLTGR------GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
+ L G+ADL G++ TP P+ +F DDPLR+LRA RF ++ F + + ++
Sbjct: 158 GDDSLETAFHDPLGGLADLAAGRLDTPASPRRSFSDDPLRMLRAARFVSQLGFDVSDRVR 217
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+A A +I+ ERV E+D ++ G +P
Sbjct: 218 EAMGE---MAGDIRRITAERVAAELDKLMLGERP 248
>gi|406888528|gb|EKD34982.1| hypothetical protein ACD_75C02102G0002 [uncultured bacterium]
Length = 466
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 92/188 (48%), Gaps = 20/188 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LGK D DI+ D G K+ + + G F ++ K
Sbjct: 59 LVGGGVRDLYLGKTPKDFDISTDARPGQ--LRKLFPHSNTIGRR----FRLVQVFFRGGK 112
Query: 158 HLETATMKL---YDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNIN 214
+E +T++ YD+ D E P FGT EDA RRDLTINSLF+ I+
Sbjct: 113 TIEVSTLRSLSEYDI----------DGPEEILAPNNTFGTLSEDARRRDLTINSLFFEID 162
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
S++ D G GI DL G I P DP+R++RAIR AR +F ++EE KA
Sbjct: 163 KSTILDYVG-GIEDLDRGIIRIAGDPARRISRDPVRMMRAIRHAARNNFTIEEETWKAIC 221
Query: 275 SDEVKAAL 282
++ K +L
Sbjct: 222 ANSNKLSL 229
>gi|366053172|ref|ZP_09450894.1| poly A polymerase [Lactobacillus suebicus KCTC 3549]
Length = 403
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD +L K +D+DIA S + +V + T +T V+ D K
Sbjct: 31 GGSVRDTILKKPIHDVDIAT-----SAYPEEVKHIFNHTVDTGIEHGTVMIL--DHGKGY 83
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVE 219
ET T + + +DY ++ +R + +ED RRD TIN+L N + ++
Sbjct: 84 ETTTFRTESGY--------QDYRRPDQVTFVR--SLKEDLQRRDFTINALAMKENGAVID 133
Query: 220 DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVK 279
+G + DLK+G I P+A F +D LR++RA+RF ++ DF ++ KK A
Sbjct: 134 LFSG--LKDLKNGIIRAVGDPQARFNEDALRMMRAVRFSSQLDFKIE---KKTLAGIADH 188
Query: 280 AALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF 317
A L KI+ ER E++ M+ G+ P +T + L+
Sbjct: 189 AQLLEKIAVERTRVELEKMLLGDNPANGITQLLETGLY 226
>gi|433456999|ref|ZP_20415021.1| tRNA adenylyltransferase [Arthrobacter crystallopoietes BAB-32]
gi|432195497|gb|ELK52024.1| tRNA adenylyltransferase [Arthrobacter crystallopoietes BAB-32]
Length = 697
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 104/214 (48%), Gaps = 28/214 (13%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDN----MMGSEFATKVAEYLSATGETAPSGFGVIPS 151
L + GG VRD LG+ D+D D ++G K A+ L G FG I
Sbjct: 36 LSLVGGPVRDLFLGRVSPDLDFTTDADPDAIIG--VVRKWADNLWEIGRD----FGTI-- 87
Query: 152 NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLF 210
++ + I+ R + Y SR P + FGT+ EED +RRD T+N++
Sbjct: 88 -----------GLRKGEYTIEVTTYRADAYDPESRKPQVAFGTSLEEDLFRRDFTMNAMA 136
Query: 211 YNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
+ + + D G GI DL G + TP P A+F DDPLR+LRA RF ++ + E+
Sbjct: 137 LRLPSLELVDPYG-GIRDLHAGVVRTPGEPSASFSDDPLRMLRAARFASQLKVSVAPEV- 194
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
AA +D A A IS ERV E+ +V+G P
Sbjct: 195 SAAMTD--MAGRIAIISAERVRDELVKLVNGKDP 226
>gi|390934996|ref|YP_006392501.1| Polynucleotide adenylyltransferase region [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570497|gb|AFK86902.1| Polynucleotide adenylyltransferase region [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 383
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 27/211 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG+VRDKLL + DIDI ++ G +FA + E L+ E
Sbjct: 11 IVGGYVRDKLLNLESDDIDITVEGD-GIKFAFMLNEILNGEMEVHDK------------- 56
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
ETA +K D +D V+ R E Y +P ++ + +D RRD TIN L ++ T+
Sbjct: 57 -FETAKIKTKDFELDIVSARKERYERPGMLPVVQRASLADDIKRRDFTINMLALDVKTNQ 115
Query: 218 VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE----LKKAA 273
+ D+ G D+K+ K++ + K +F+DDP R+ RAIR+ R F +++ L+K+
Sbjct: 116 IIDIYNGG-NDIKN-KLIRVVHDK-SFVDDPTRIFRAIRYSGRLGFKIEQHTERLLRKSI 172
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ ++ +S +R+ EI L++ +P
Sbjct: 173 SDGDI-----FNVSADRIMNEIYLILKEKKP 198
>gi|422457693|ref|ZP_16534351.1| tRNA adenylyltransferase [Propionibacterium acnes HL050PA2]
gi|422466516|ref|ZP_16543078.1| tRNA adenylyltransferase [Propionibacterium acnes HL110PA4]
gi|422468236|ref|ZP_16544767.1| tRNA adenylyltransferase [Propionibacterium acnes HL110PA3]
gi|422576462|ref|ZP_16651999.1| tRNA adenylyltransferase [Propionibacterium acnes HL001PA1]
gi|314922775|gb|EFS86606.1| tRNA adenylyltransferase [Propionibacterium acnes HL001PA1]
gi|314982981|gb|EFT27073.1| tRNA adenylyltransferase [Propionibacterium acnes HL110PA3]
gi|315091487|gb|EFT63463.1| tRNA adenylyltransferase [Propionibacterium acnes HL110PA4]
gi|315105242|gb|EFT77218.1| tRNA adenylyltransferase [Propionibacterium acnes HL050PA2]
Length = 507
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + ++ AT + FG I + D
Sbjct: 67 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRQHTHATWDIG-RAFGTIGAQID- 123
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T E+D RRD T+N++ +
Sbjct: 124 ------------DWVVEVTTYRADAYHPDSRKPEIVYGETLEDDLIRRDFTVNAMALHAA 171
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+ D+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 172 TRTFSDPYA-GLTDIVSGILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 229
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 230 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 261
>gi|422463363|ref|ZP_16539976.1| tRNA adenylyltransferase [Propionibacterium acnes HL060PA1]
gi|422565682|ref|ZP_16641321.1| tRNA adenylyltransferase [Propionibacterium acnes HL082PA2]
gi|314965692|gb|EFT09791.1| tRNA adenylyltransferase [Propionibacterium acnes HL082PA2]
gi|315094587|gb|EFT66563.1| tRNA adenylyltransferase [Propionibacterium acnes HL060PA1]
Length = 507
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + ++ AT + FG I + D
Sbjct: 67 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRQHTHATWDIG-RAFGTIGAQID- 123
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T E+D RRD T+N++ +
Sbjct: 124 ------------DWVVEVTTYRADAYHPDSRKPEIVYGETLEDDLIRRDFTVNAMALHAA 171
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+ D+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 172 TRTFSDPYA-GLTDIVSGILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 229
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 230 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 261
>gi|350568516|ref|ZP_08936915.1| polyA polymerase family protein [Propionibacterium avidum ATCC
25577]
gi|348661388|gb|EGY78080.1| polyA polymerase family protein [Propionibacterium avidum ATCC
25577]
Length = 507
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 105/212 (49%), Gaps = 24/212 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSG--FGVIPSNP 153
L + GG VRD L+G+ +D+D D + T A S T T G FG I +
Sbjct: 67 LYLVGGSVRDALMGRLGHDLDFTTD----ARPDTTEAILRSCTHATWDIGRAFGTIGAQI 122
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYN 212
D D ++ R + Y +SR P + +G T E+D RRD T+N++ +
Sbjct: 123 D-------------DWVVEVTTYRADAYHPDSRKPEIVYGDTLEDDLIRRDFTVNAMALH 169
Query: 213 INTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
T + D G+AD+ G + TP PP+ +F DDPLR++RA RF ++ F + +E+ +A
Sbjct: 170 AMTRTFSDPYA-GLADIVAGVLRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTDEV-RA 227
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
A +D A IS ERV E+ + + P
Sbjct: 228 AMTD--MAPRIEIISAERVHDELSKTLLTDHP 257
>gi|282852983|ref|ZP_06262320.1| tRNA adenylyltransferase [Propionibacterium acnes J139]
gi|386070487|ref|YP_005985383.1| tRNA adenylyltransferase [Propionibacterium acnes ATCC 11828]
gi|282582436|gb|EFB87816.1| tRNA adenylyltransferase [Propionibacterium acnes J139]
gi|353454853|gb|AER05372.1| tRNA adenylyltransferase [Propionibacterium acnes ATCC 11828]
Length = 499
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + ++ AT + FG I + D
Sbjct: 59 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRQHTHATWDIG-RAFGTIGAQID- 115
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T E+D RRD T+N++ +
Sbjct: 116 ------------DWVVEVTTYRADAYHPDSRKPEIVYGETLEDDLIRRDFTVNAMALHAA 163
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+ D+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 164 TRTFSDPYA-GLTDIVSGILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 221
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 222 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 253
>gi|386812476|ref|ZP_10099701.1| phosphohydrolase [planctomycete KSU-1]
gi|386404746|dbj|GAB62582.1| phosphohydrolase [planctomycete KSU-1]
Length = 434
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 105/225 (46%), Gaps = 30/225 (13%)
Query: 83 LLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETA 142
++ TL+ + L AGG VRD ++GK+ +D DIA D M + + +T
Sbjct: 10 IVQTLQKHGYKAFL--AGGCVRDMIMGKESFDYDIATDAM--------PHDVIRIFQKTI 59
Query: 143 PSG--FGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRFGTAEEDA 199
P G FGV+ + + E AT R ED + R P + F T E D
Sbjct: 60 PVGIQFGVVIV-VKEGHNFEVAT------------FRTEDSYSDGRHPDRISFSTPENDV 106
Query: 200 YRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGA 259
RRD TIN L Y+ + D G G D++ G + T P F +D LR++RA RF
Sbjct: 107 KRRDFTINGLLYDPVKDEILDYVG-GRKDIEAGIVRTIGDPIERFTEDKLRMIRAARFAC 165
Query: 260 RFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
RF F + ++ ++A A +S ER+ E++ +++G P
Sbjct: 166 RFHFSIHKDTQQAIMQ---LAPQIHMVSAERIREELEKIITGPNP 207
>gi|392419070|ref|YP_006455675.1| tRNA adenylyltransferase [Mycobacterium chubuense NBB4]
gi|390618846|gb|AFM19996.1| tRNA adenylyltransferase [Mycobacterium chubuense NBB4]
Length = 489
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LLG+ D+D D EF A+ + TG FG +
Sbjct: 46 LYLVGGSVRDALLGRLGSDLDFTTDARPEQMQEFLRGWADAVWDTG----IAFGTLGVAK 101
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYN 212
Q + ++ R + Y + SR P +RFG +D RRD T+N++
Sbjct: 102 GQDR-------------LELTTFRADTYDQVSRHPEVRFGDNLADDLVRRDFTVNAMAVR 148
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I + G+A L+ G + TP P+ +F DDPLR+LRA RF ++ F + ++
Sbjct: 149 ITPEGPAEFLDPLGGLAALRAGALDTPAEPEVSFGDDPLRMLRAARFVSQLGFTVAPRVR 208
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+A E A +IS ERV E+D ++ G PV +
Sbjct: 209 RAL---EEMAPQLGRISVERVAAELDKLLLGTDPVAGV 243
>gi|288553438|ref|YP_003425373.1| polyA polymerase family protein [Bacillus pseudofirmus OF4]
gi|288544598|gb|ADC48481.1| polyA polymerase family protein [Bacillus pseudofirmus OF4]
Length = 845
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 112/230 (48%), Gaps = 21/230 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG+VRD LL + D+D+ ++ G EFA +A + + + + PD
Sbjct: 470 LVGGFVRDLLLKRPNEDLDVVIEGD-GIEFANVLAASNGGSIKKHDTFGTATWTTPD--- 525
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
D+ ID V R E Y+E + +P +R ED RRD TIN++ +I+ S
Sbjct: 526 ----------DMKIDIVTCRTEYYAETASLPIVRSSNIHEDLTRRDFTINAMAMSISEHS 575
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
L +GI DLK KI P +F++DP R+ RA+RF RF + ++ E + A S
Sbjct: 576 FGKLLDEYQGIEDLKAKKIRILHP--ISFIEDPTRIFRAVRFAVRFGYSIEGETARLAQS 633
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPL 325
+ +S++R+ E+ L+ + ++A + L ++ +F+ L
Sbjct: 634 ---AMSHLFSLSQQRLRQELTLIHKEAKDLEAFYLLDTLNVWKTLFQKEL 680
>gi|408530746|emb|CCK28920.1| tRNA adenylyltransferase [Streptomyces davawensis JCM 4913]
Length = 481
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + V + A E + FG + + D
Sbjct: 44 LALVGGSVRDALLGRLGSDLDFTTD-ARPEDVLKIVRPWADAVWEVGIA-FGTVGAQKDG 101
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 102 YQ-------------IEVTTYRSEAYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMAVALP 148
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+ +F DDPLR++RA RF A+ DF + E+ AA
Sbjct: 149 EKEFIDPHG-GLEDLAERVLRTPGTPEESFSDDPLRMMRAARFAAQLDFEVAPEV--VAA 205
Query: 275 SDEVKAALAAKISRERVGTEID-LMVSGNQPVKAMT 309
E+ A + +S ERV E++ L++SGN P K +T
Sbjct: 206 MTEMAARIEI-VSAERVQGELNKLILSGN-PRKGLT 239
>gi|406932896|gb|EKD67721.1| hypothetical protein ACD_48C00251G0002, partial [uncultured
bacterium]
Length = 344
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 133/283 (46%), Gaps = 46/283 (16%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCY-DIDIALDNMMGSEFA---TKVA 132
+++F + TL H T + V GG+VRD+LL +D D+D + +GS A T A
Sbjct: 4 SQVFKTI-GTLSH-QTGTQVYVVGGFVRDQLLERDIKKDLDFVV---LGSGLAFAKTFAA 58
Query: 133 EYLSATG--------ETAPSGF----GVIPSNPDQSKHLETATMKLYDLWIDFVNLRCED 180
++ G +TA F I N +Q K T L ++F R E
Sbjct: 59 QFSEENGRLIEFSDFDTARYVFLETTQSIAENGEQEKQYRTL------LEVEFAGARKEA 112
Query: 181 YSENSRIPTMRFGTAEEDAYRRDLTINSLFYNI-NTSSVEDLTG--RGIADLKHGKIVTP 237
Y +SR PT+ T EED RRD T+N++ I ++ D+ G D+K + TP
Sbjct: 113 YRSDSRKPTVVPATLEEDLSRRDFTVNAMAQQILPDGTLGDIVDPYNGTQDIKDRMLRTP 172
Query: 238 LPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDL 297
L P TF +DPLR++RA RF A+ F ++ KK + + A + +S ER+ E+
Sbjct: 173 LEPGETFSEDPLRMMRAARFSAQLIFEIE---KKTYLAMKKYAPRLSIVSAERIQEELMK 229
Query: 298 MVSGNQPVKAMTHICGLTLFWIVFKLPL--QVEPEV--LEGCE 336
+ + +P GL W ++K L Q PEV L G E
Sbjct: 230 LFATAKPS------IGL---WALYKSELFDQFMPEVSNLAGVE 263
>gi|300120160|emb|CBK19714.2| unnamed protein product [Blastocystis hominis]
Length = 150
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Query: 213 INTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+NT +VED T RGI+DL + TPLP TF +DPLR+LRA+RF RFD +D + +A
Sbjct: 1 MNTGTVEDFTMRGISDLHDRLVRTPLPAIETFREDPLRLLRAVRFATRFDCSIDPSIFEA 60
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGL----TLFWIVFKLPLQVE 328
A E++ L+ K+SRER+G E M +A+ + + +LF I L ++
Sbjct: 61 ARIPEIEHFLSIKVSRERIGIEFLKMAQFRHFDRALHELSNMAILNSLFHIEGDLTFYMK 120
Query: 329 PEVLEGCEMF 338
+ L E F
Sbjct: 121 NQKLRSMEEF 130
>gi|51244425|ref|YP_064309.1| polyA polymerase [Desulfotalea psychrophila LSv54]
gi|50875462|emb|CAG35302.1| probable polyA polymerase [Desulfotalea psychrophila LSv54]
Length = 497
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 108/238 (45%), Gaps = 31/238 (13%)
Query: 60 RPVVVQVRDKIELTDT-----ETKIFSCLLNTLRHFNLETVLRVA------GGWVRDKLL 108
+P ++ +KI+L+ T + I +L+ F LE + GG VRD L
Sbjct: 41 QPQTIEAPEKIKLSCTVIAQGQHPITKKMLDPDALFVLEKLRNAGFSGYLVGGGVRDLYL 100
Query: 109 GKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKL-- 166
GK D DI+ + G L T F ++ K +E +T++
Sbjct: 101 GKTPKDFDISTNARPGQ------LRKLFKNSNTIGRRFRLVQVFFKGGKTIEVSTLRSLS 154
Query: 167 -YDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRG 225
+DL D E P FGT +EDA RRDLTINSLFY I T S+ D G G
Sbjct: 155 EHDL----------DGPEAILAPNNTFGTLDEDAQRRDLTINSLFYEIETHSIIDYVG-G 203
Query: 226 IADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALA 283
+ DL+ G + PK DP+R++RAIR +R DF ++E+ +A + AL
Sbjct: 204 VEDLEKGIVRIVGDPKKRITRDPVRIMRAIRHCSRNDFTIEEKSWEAICDQHQQLALC 261
>gi|392945774|ref|ZP_10311416.1| tRNA adenylyltransferase [Frankia sp. QA3]
gi|392289068|gb|EIV95092.1| tRNA adenylyltransferase [Frankia sp. QA3]
Length = 489
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 105/235 (44%), Gaps = 27/235 (11%)
Query: 95 VLRVAGGWVRDKLLGKDCY-------DIDIALDNMMGSEFATKVAEYLSATGETAPSGFG 147
+L + GG VRD LLG+ D+D A D E ++ + A FG
Sbjct: 38 LLHLVGGSVRDALLGRPTAGAAGAPADLDFATDAR--PERVLEITRGWAEATWEAGIAFG 95
Query: 148 VIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTI 206
T + L + R E Y SR PT+ +G + E D RRD T+
Sbjct: 96 -------------TVGLARRGLRFEITTYRSEAYDRQSRNPTVTYGDSLEADLSRRDFTV 142
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
N++ ++ DL G G+ADL G + TP P+A+F DDPLR+LRA RF A
Sbjct: 143 NAMAVSVPGHDFVDLFG-GMADLARGVLRTPASPEASFDDDPLRILRAARFEAALGLTPV 201
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
EL +A S + A+ +S ER+ E+ ++ PV + + + + IV
Sbjct: 202 PELVEAMRSRVERLAI---VSPERIRDELRKLIGAPDPVAGLERLVEIGVAEIVL 253
>gi|86743206|ref|YP_483606.1| metal dependent phosphohydrolase [Frankia sp. CcI3]
gi|86570068|gb|ABD13877.1| metal dependent phosphohydrolase [Frankia sp. CcI3]
Length = 502
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 108/236 (45%), Gaps = 28/236 (11%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT-----KVAEYLSATGET---APSGF 146
+L + GG VRD LLG+ + A+ + +FAT +V E E A F
Sbjct: 38 LLHLVGGSVRDALLGRPASAVSGAVPADL--DFATDARPERVLEITRGWAEATWEAGIAF 95
Query: 147 GVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLT 205
G T + + + + R E Y SR P + +G + E D RRD T
Sbjct: 96 G-------------TVGLARHGVRFEITTYRSEAYDRKSRNPAVTYGDSLEADLSRRDFT 142
Query: 206 INSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFIL 265
+N++ ++ DL G G+ADL G + TP P+A+F DDPLR+LRA RF A
Sbjct: 143 VNAMAVSVPGHDFVDLFG-GMADLARGVLRTPASPEASFDDDPLRILRAARFEAALGLTP 201
Query: 266 DEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
EL A S +A A +S ER+ E+ ++S PV + + + + IV
Sbjct: 202 VPELVAAMRS---RADRLAVVSPERIRDELRKLMSAPDPVAGLERLVEVGIADIVL 254
>gi|145597083|ref|YP_001161380.1| HDIG domain-containing protein [Salinispora tropica CNB-440]
gi|145306420|gb|ABP57002.1| HDIG domain protein [Salinispora tropica CNB-440]
Length = 485
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D V + A ET FG I D
Sbjct: 46 LHLVGGSVRDALLGRLGDDLDFCTDAHPDQTLRI-VRGWAEAIWETGRE-FGTIGVQRD- 102
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
L ++ R E Y + SR P +++GT+ ED RRD T+N++ ++
Sbjct: 103 ------------GLRLEITTFRAEVYDQVSRNPVVQYGTSLAEDLKRRDFTVNAMAVSLP 150
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ADL + TP P+ +F DDPLR+LRA RF A+ F + +++ A
Sbjct: 151 EHRFIDPHG-GLADLAAKVVRTPAAPEESFRDDPLRMLRAARFAAQLRFAVHPDVRAAMV 209
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
AA +I+ ER+ E ++ G P+ +
Sbjct: 210 R---MAADLDRITAERIRDEFTKLLCGADPIAGL 240
>gi|386853296|ref|YP_006271309.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Actinoplanes sp. SE50/110]
gi|359840800|gb|AEV89241.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Actinoplanes sp. SE50/110]
Length = 482
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D A V + A ET FG I
Sbjct: 42 LHLVGGSVRDALLGRLGDDLDFCTDAHPEQTLAV-VKSWADAIWETGRE-FGTI------ 93
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE-EDAYRRDLTINSLFYNIN 214
++ L I+ R E Y +R P + +GT+ +D RRD TIN++ ++
Sbjct: 94 -------GIQKNGLRIEITTFRAEAYDGVTRNPVVSYGTSLLDDLSRRDFTINAMAVSVP 146
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ADL I TP P+ +F DDPLR+LRA RF A+ F + E + AA
Sbjct: 147 GHDFTDPFG-GLADLASRVIRTPAAPEQSFGDDPLRMLRAARFAAKLQFTVAEPV--IAA 203
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
++ A L +I+ ER+ E ++ G P+ +
Sbjct: 204 MRDMAADL-DRITAERIRDEFTKLMCGTDPIAGL 236
>gi|15643478|ref|NP_228524.1| tRNA nucleotidyl transferase-related protein [Thermotoga maritima
MSB8]
gi|418045115|ref|ZP_12683211.1| Polynucleotide adenylyltransferase region [Thermotoga maritima
MSB8]
gi|4981239|gb|AAD35797.1|AE001742_12 tRNA nucleotidyl transferase-related protein [Thermotoga maritima
MSB8]
gi|351678197|gb|EHA61344.1| Polynucleotide adenylyltransferase region [Thermotoga maritima
MSB8]
Length = 863
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LLG DIDI ++ A + AEY +P +
Sbjct: 474 VVGGFVRDLLLGIKNLDIDIVVEGN-----ALEFAEYAKR----------FLPGKLVKHD 518
Query: 158 HLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA++ L L ID R E Y +++P + T ++D YRRD TIN++ +N
Sbjct: 519 KFMTASLFLKGGLRIDIATARLEYYESPAKLPDVEMSTIKKDLYRRDFTINAMAIKLNPK 578
Query: 217 S---VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+ D G G DLK G V + +F+DDP R+LRAIRF RFDF + EE +
Sbjct: 579 DFGLLIDFFG-GYRDLKEG--VIRVLHTLSFVDDPTRILRAIRFEQRFDFRI-EETTERL 634
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
V+ + + R+ E++ ++ P+K++ +
Sbjct: 635 LKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSIRRMA 673
>gi|441518065|ref|ZP_20999793.1| putative tRNA nucleotidyltransferase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441455094|dbj|GAC57754.1| putative tRNA nucleotidyltransferase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 487
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D + A + E+ A T FG + D
Sbjct: 49 LYLVGGSVRDAVLGRLGNDLDFTTDARPET-IAEILGEWAEAVWTTGIE-FGTVSGVKDG 106
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
+ ++ R + Y R P + FG T E+D RRD +N++ +N
Sbjct: 107 NT-------------VEITTYRSDVYDRIGRNPAVTFGDTLEDDLIRRDFRVNAMAVKLN 153
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
++ G+ DL G I TP P+ +F DDPLR+LR +RF ++ F L + +
Sbjct: 154 PDGTQEFCDPLDGMDDLLAGVIDTPAAPEDSFNDDPLRMLRGLRFVSQLGFTLSD---RT 210
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A+ AA +I+ ER+ E+D ++ G P++A+
Sbjct: 211 LAAITAMAAQIDRITAERIQVELDKLICGEHPIEAI 246
>gi|399526913|ref|ZP_10766650.1| CCA tRNA nucleotidyltransferase [Actinomyces sp. ICM39]
gi|398362535|gb|EJN46227.1| CCA tRNA nucleotidyltransferase [Actinomyces sp. ICM39]
Length = 523
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 27/239 (11%)
Query: 77 TKIFSCL------LNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATK 130
T+ F+ L L T+ H E L + GG VRD LG +D D M S +
Sbjct: 19 TRTFAALPPAIMELGTIFHEAGEE-LALVGGPVRDAFLGVTPHDFD-----MTTSARPER 72
Query: 131 VAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTM 190
E L+ G + D K T + DL ++ R ++Y SR P +
Sbjct: 73 TEELLAKWGN----------ATWDIGKEFGTIGGRRGDLVVEVTTYRTDEYEIGSRKPEV 122
Query: 191 RFG-TAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
FG T E D RRD T+N++ + ++ D G G+ADL G + TP+ + +F DDPL
Sbjct: 123 TFGDTLEGDLTRRDFTVNAMAMRLPQMALVDPCG-GLADLADGNLRTPVSAEQSFDDDPL 181
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
R++RA RF A+ +D ++ A E A+ +S ER+ E++ ++ P + +
Sbjct: 182 RIMRAARFSAQLGLDVDMDVMNAM---ETMASRLEIVSAERIRAELERLIISPYPRRGI 237
>gi|317126719|ref|YP_004100831.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Intrasporangium calvum DSM 43043]
gi|315590807|gb|ADU50104.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Intrasporangium calvum DSM 43043]
Length = 527
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LG+ D+D + + A V G ++ D
Sbjct: 82 LALVGGPVRDAFLGRISPDLDFTTNASTDAILAAVV---------------GWADAHWDI 126
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
+ T ++ D I+ + R + Y SR P + FG T E D RRD T+N++ +
Sbjct: 127 GREFGTIGLRKGDHHIEITSYRADTYDRTSRRPEVMFGDTLEGDLVRRDFTVNAMAIRLP 186
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ D+ G+ADL +++TP PP+ +F DDPLR++RA RF ++ F + E++ A
Sbjct: 187 SLEFVDVHD-GLADLAARRLMTPAPPEESFADDPLRMMRAARFASQLGFEVAVEVRAAMT 245
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
+A A IS ER+ E ++ P +T
Sbjct: 246 E---RAGTLAIISAERIRDEFTKLLLSPAPRPGLT 277
>gi|302535590|ref|ZP_07287932.1| tRNA adenylyltransferase [Streptomyces sp. C]
gi|302444485|gb|EFL16301.1| tRNA adenylyltransferase [Streptomyces sp. C]
Length = 483
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D E K+ + + FG + + D
Sbjct: 44 LALVGGSVRDALLGRLGNDLDFTTDAR--PEAVLKIMRPWADSLWDVGIAFGTVGAQRD- 100
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 101 ------------GFQIEVTTYRSEAYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMALALP 148
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA-- 272
D G G+ DL G + TP P+ +F DDPLR+LRA RF A+ DF + E+ A
Sbjct: 149 EQEFVDPHG-GLEDLAAGVLRTPGTPEDSFSDDPLRMLRAARFAAQLDFEVAPEVVSAMK 207
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A SD ++ +S ERV E++ ++ P K +
Sbjct: 208 AMSDRIEI-----VSAERVQGELNKLLLSAHPRKGL 238
>gi|159040572|ref|YP_001539825.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Salinispora arenicola CNS-205]
gi|157919407|gb|ABW00835.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Salinispora arenicola CNS-205]
Length = 485
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D V + A ET FG I D
Sbjct: 46 LHLVGGSVRDALLGRLGDDLDFCTDAHPDQTLQI-VRGWAEAVWETGRE-FGTIGVQRD- 102
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
L ++ R E Y + SR P +++GT+ ED RRD T+N++ ++
Sbjct: 103 ------------GLRLEITTFRAEVYDQVSRNPVVQYGTSLTEDLKRRDFTVNAMAVSVP 150
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ADL + TP P+ +F DDPLR+LRA RF A+ F + +++ A
Sbjct: 151 DHRFTDPHG-GLADLATKVVRTPSAPEESFRDDPLRMLRAARFAAQLRFAVHPDVRAAMT 209
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A +I+ ER+ E ++ G PV +
Sbjct: 210 R---MATDLDRITAERIRDEFTKLLCGADPVTGL 240
>gi|453078364|ref|ZP_21981095.1| polynucleotide adenylyltransferase [Rhodococcus triatomae BKS
15-14]
gi|452757120|gb|EME15527.1| polynucleotide adenylyltransferase [Rhodococcus triatomae BKS
15-14]
Length = 471
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 25/222 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D E + + + FG I + D+
Sbjct: 30 LYLVGGSVRDAVLGRLGTDLDFTTDAR--PEQVQALLKGWADNQWDTGIAFGTISAAKDE 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R + Y +R P +R+GT+ +ED RRD T+N++ I
Sbjct: 88 QQ-------------IEITTFRTDAYDGVTRNPEVRYGTSLDEDLVRRDFTVNAMAVRIG 134
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
++ G+ L G + TP P+ +F DDPLR+LRA RF ++ F L +++A
Sbjct: 135 ADGGQEFVDPLGGMDALLAGVLDTPAAPEISFNDDPLRMLRAARFVSQLGFTLAPRVREA 194
Query: 273 --AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
A +D++ +I+ ERV TE+D ++ G P + + +C
Sbjct: 195 IVAMADQID-----RITAERVRTELDKLILGEYPGEGVDVMC 231
>gi|78044937|ref|YP_360768.1| poly(A) polymerase [Carboxydothermus hydrogenoformans Z-2901]
gi|77997052|gb|ABB15951.1| polyA polymerase family protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 864
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 116/244 (47%), Gaps = 22/244 (9%)
Query: 83 LLNTLRHFNLETVLRV--AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGE 140
L+N + + + +RV GG VRD LLG D+DI ++ A +V + LSA
Sbjct: 461 LINVVGKWASQLGMRVFLVGGIVRDLLLGHKQKDLDIVVEGD-ALVLAQEVGKTLSA--- 516
Query: 141 TAPSGFGVIPSNPDQSKHLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDA 199
IP + +TA++ L + IDF R E Y + +P + T ED
Sbjct: 517 -----IKFIPH-----ERFKTASIILKNGQKIDFSTSRVEFYQHPAALPEVEVSTIREDL 566
Query: 200 YRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRF 257
YRRD TINS+ I + +L G+ DL+ G + + +F++DP R+LRA+RF
Sbjct: 567 YRRDFTINSMAIEITYGHIGELFDPFGGLLDLREG--IIRVLHNLSFVEDPTRILRALRF 624
Query: 258 GARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF 317
RF+F L+E +K D + +S R+ E+ L+ + +K + + +F
Sbjct: 625 LGRFNFKLEENTEKLLV-DAIAGGFLNLVSSARILYELKLIFAEKDILKILKFLKHYGVF 683
Query: 318 WIVF 321
VF
Sbjct: 684 QEVF 687
>gi|225020840|ref|ZP_03710032.1| hypothetical protein CORMATOL_00848 [Corynebacterium matruchotii
ATCC 33806]
gi|224946322|gb|EEG27531.1| hypothetical protein CORMATOL_00848 [Corynebacterium matruchotii
ATCC 33806]
Length = 531
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 112/261 (42%), Gaps = 50/261 (19%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLR-----VAGGWVRDKLLGKDCYDIDIALDNMM 123
+IE+ FS L+ ++ E R + GG VRD LLG+ D+D D
Sbjct: 31 EIEVLARAEASFSALMPIIQPLAAEFNTRGHHLYLVGGSVRDALLGRLGNDVDFTTDAR- 89
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
E ++ E+ + +G + + + I+ R + Y
Sbjct: 90 -PETILEILEHFADITWDTGIEYGTVSAEKSGQQ-------------IEITTFRSDIYDG 135
Query: 184 NSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTSSVE-------------DLTGRGIADL 229
SR P + FG T D RRD TIN++ I ++ D G G ADL
Sbjct: 136 ESRNPEVVFGDTLAGDLVRRDFTINAMAVEITSAPDAAGATPAAAELEFFDPMG-GFADL 194
Query: 230 KHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAA---LAAKI 286
G I TP P +F DDPLR+LRA RF ++ F A SD V+AA LA++I
Sbjct: 195 MKGVIDTPAAPDQSFADDPLRLLRAARFSSQLGF---------AVSDRVRAAMTDLASEI 245
Query: 287 SR---ERVGTEIDLMVSGNQP 304
R ERV E+D M+ G QP
Sbjct: 246 QRITVERVQVELDKMLLGAQP 266
>gi|333992971|ref|YP_004525585.1| poly(A) polymerase [Mycobacterium sp. JDM601]
gi|333488939|gb|AEF38331.1| poly(a) polymerase PcnA [Mycobacterium sp. JDM601]
Length = 482
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LLG+ D+D D + AE L TG FG I +
Sbjct: 39 LYLVGGSVRDALLGRSSPDLDFTTDARPEQVQQLLRGRAEALWDTGIE----FGTIGAG- 93
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
L+ ++ R + Y SR P +RFG + ED RRD T N++
Sbjct: 94 ------------LHGYRVEITTFRADKYDRVSRNPEVRFGDSLHEDLVRRDFTANAMAVR 141
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I + + G+A L+ G + TP P+ +F DDPLR+LRA RF ++ F + ++
Sbjct: 142 ITGAGPGEFLDPLGGLAALRAGVLDTPTAPQDSFGDDPLRMLRAARFVSQLGFTVAPRVR 201
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
AA +E+ L ++I+ ERV E+D ++ G P +
Sbjct: 202 --AAIEEMAEQL-SRITPERVAAELDKLLLGADPAAGI 236
>gi|403509455|ref|YP_006641093.1| CCA tRNA nucleotidyltransferase [Nocardiopsis alba ATCC BAA-2165]
gi|402798754|gb|AFR06164.1| CCA tRNA nucleotidyltransferase [Nocardiopsis alba ATCC BAA-2165]
Length = 478
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 35/259 (13%)
Query: 71 ELTDTETKIFSCLLNTLRHFNLETVLRVA---------GGWVRDKLLGKDCYDIDIALDN 121
E T + + L++++R + E R A GG VRD LLG+ DID+ D
Sbjct: 3 EPTGEQRAAITALIDSMRTVSEELGDRFAAHDQQLALVGGPVRDALLGRASNDIDLTTDA 62
Query: 122 MMGSEFATKVAEYLSATGE---TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRC 178
+ ++ E + + T FG T ++ ++ R
Sbjct: 63 V-----PQRILELVDGWADSVWTVGIEFG-------------TVGLRKRGDQLEITTYRS 104
Query: 179 EDYSENSRIPTMRFGT-AEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTP 237
E YS SR P + +GT +D RRD T+N++ + + D G G+ADL+ + TP
Sbjct: 105 EAYSPKSRKPEVSYGTDIRDDLLRRDFTVNAMAVRLPSGEFVDPFG-GLADLRAKVLRTP 163
Query: 238 LPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDL 297
P+ +F DDPLR++RA+RF A+ DF L E+ +AA + + +S ERV E+
Sbjct: 164 GRPEDSFSDDPLRIMRAVRFAAQLDFTLAPEVAEAARDMADRLTI---VSAERVRDELTK 220
Query: 298 MVSGNQPVKAMTHICGLTL 316
++ P + + + L +
Sbjct: 221 LLLSPNPRRGIELMVDLGI 239
>gi|257784302|ref|YP_003179519.1| metal dependent phosphohydrolase [Atopobium parvulum DSM 20469]
gi|257472809|gb|ACV50928.1| metal dependent phosphohydrolase [Atopobium parvulum DSM 20469]
Length = 492
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 22/213 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GGWVRD L G +DIDI T +A + + +G IP + +
Sbjct: 58 IVGGWVRDALRGSFAHDIDI-----------TTLATWQQSKAAFVAAG---IPVH-ETGI 102
Query: 158 HLETATMKLYDLWIDFVNLRCE-DYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNINT 215
T T + I+ RC+ +Y + R +++F + E+D RRD TIN++ Y+
Sbjct: 103 AYGTVTAVVEQHPIEVTTYRCDGEYLDGRRPDSVQFVSCIEKDLARRDFTINAMAYH-PK 161
Query: 216 SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+ DL G G DL I + PKA F +D LR+LRA+RF RF F ++E+ +A
Sbjct: 162 RGLLDLYG-GQEDLSAHVIRSVGEPKARFTEDALRMLRALRFACRFSFSVEEKTHQALIE 220
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A L ++++ ER+G E+ +V G A+
Sbjct: 221 ---CAPLLSQVASERIGLEVAQIVEGGHIAHAI 250
>gi|261278702|pdb|3H37|A Chain A, The Structure Of Cca-Adding Enzyme Apo Form I
gi|261278703|pdb|3H37|B Chain B, The Structure Of Cca-Adding Enzyme Apo Form I
Length = 441
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LLG DIDI ++ A + AEY +P +
Sbjct: 39 VVGGFVRDLLLGIKNLDIDIVVEGN-----ALEFAEYAKR----------FLPGKLVKHD 83
Query: 158 HLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA++ L L ID R E Y +++P + T ++D YRRD TIN+ +N
Sbjct: 84 KFXTASLFLKGGLRIDIATARLEYYESPAKLPDVEXSTIKKDLYRRDFTINAXAIKLNPK 143
Query: 217 SVE---DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
D G G DLK G V + +F+DDP R+LRAIRF RFDF + EE +
Sbjct: 144 DFGLLIDFFG-GYRDLKEG--VIRVLHTLSFVDDPTRILRAIRFEQRFDFRI-EETTERL 199
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
V+ + + R+ E++ ++ P+K++
Sbjct: 200 LKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSI 234
>gi|403252453|ref|ZP_10918763.1| tRNA nucleotidyl transferase-related protein [Thermotoga sp. EMP]
gi|402812466|gb|EJX26945.1| tRNA nucleotidyl transferase-related protein [Thermotoga sp. EMP]
Length = 863
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LLG D+DI ++ A + AEY +P +
Sbjct: 474 VVGGFVRDLLLGIKNLDVDIVVEGN-----ALEFAEYAKR----------FLPGKLVKHD 518
Query: 158 HLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA++ L L ID R E Y +++P + T ++D YRRD TIN++ +N
Sbjct: 519 KFMTASLFLKGGLRIDIATARLEYYESPAKLPDVEMSTIKKDLYRRDFTINAMAIKLNPK 578
Query: 217 S---VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+ D G G DLK G V + +F+DDP R+LRAIRF RFDF + EE +
Sbjct: 579 DFGLLIDFFG-GYRDLKEG--VIRVLHTLSFVDDPTRILRAIRFEQRFDFRI-EETTERL 634
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
V+ + + R+ E++ ++ P+K++ +
Sbjct: 635 LKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSIRRMA 673
>gi|433610237|ref|YP_007042606.1| Polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Saccharothrix espanaensis DSM 44229]
gi|407888090|emb|CCH35733.1| Polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Saccharothrix espanaensis DSM 44229]
Length = 478
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 27/235 (11%)
Query: 96 LRVAGGWVRDKLLGK--DCYDIDIALDNMMGS--EFATKVAEYLSATGETAPSGFGVIPS 151
L + GG VRD LLG+ +D+D D + + + AE + TG FG + +
Sbjct: 34 LYLVGGSVRDALLGRLAGAFDLDFTTDARPAAVQKLLSGWAEAIWDTG----IAFGTVGA 89
Query: 152 NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLF 210
+KH +T ++ R + Y +R P + FG T E D RRD T+N++
Sbjct: 90 ----TKHGQT---------VEITTFRADAYDGVTRNPEVTFGDTVEGDLVRRDFTVNAMA 136
Query: 211 YNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
+++ + D TG G A L G + TP P+ +F DDPLR+LRA RF ++ F +
Sbjct: 137 FDLVARELVDPTG-GRAALAAGVLDTPATPQESFGDDPLRMLRATRFVSQLGFTPAPRVV 195
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF-KLP 324
+A S A A+I+ ERV E+ +++G +P + + L +V +LP
Sbjct: 196 EAMTS---MAGELARITPERVQAELSKLLTGARPRAGIELMVATGLADVVLPELP 247
>gi|296141887|ref|YP_003649130.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Tsukamurella paurometabola DSM 20162]
gi|296030021|gb|ADG80791.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Tsukamurella paurometabola DSM 20162]
Length = 486
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D +V L G + D
Sbjct: 45 LYLVGGSVRDALLGRLTSDLDFTTDAR-----PEQVQALLR----------GWADAMWDT 89
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
T + +D I+ R E Y +R P ++FG +D RRD TIN++ I
Sbjct: 90 GIEFGTVSAAFHDQQIEITTYRAEAYDRVTRNPVVKFGENLRDDLVRRDFTINAMAVRIG 149
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
ED G+ L G I TP P+ +F DDPLR+LRA RF ++ F + +++A
Sbjct: 150 RDGAEDFQDPLNGLDALLAGVIDTPATPEESFSDDPLRMLRAARFVSQLGFAVAARVQRA 209
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A +I+ ERV E+D ++ G PV +
Sbjct: 210 MTD---MAPEIDRITAERVRAELDKLILGEHPVDGI 242
>gi|281411943|ref|YP_003346022.1| Polynucleotide adenylyltransferase region [Thermotoga naphthophila
RKU-10]
gi|281373046|gb|ADA66608.1| Polynucleotide adenylyltransferase region [Thermotoga naphthophila
RKU-10]
Length = 863
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LLG D+DI ++ A + AEY +P +
Sbjct: 474 VVGGFVRDLLLGIKNLDVDIVVEGN-----ALEFAEYAKR----------FLPGKLVKHD 518
Query: 158 HLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA++ L L ID R E Y +++P + T ++D YRRD TIN++ +N
Sbjct: 519 KFMTASLFLKGGLRIDIATARLEYYESPAKLPDVEMSTIKKDLYRRDFTINAMAIKLNPK 578
Query: 217 S---VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+ D G G DLK G V + +F+DDP R+LRAIRF RFDF + EE +
Sbjct: 579 DFGLLIDFFG-GYRDLKEG--VIRVLHTLSFVDDPTRILRAIRFEQRFDFRI-EETTERL 634
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
V+ + + R+ E++ ++ P+K++ +
Sbjct: 635 LKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSIRRMA 673
>gi|170288018|ref|YP_001738256.1| CBS domain-containing protein [Thermotoga sp. RQ2]
gi|170175521|gb|ACB08573.1| CBS domain containing protein [Thermotoga sp. RQ2]
Length = 863
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LLG D+DI ++ A + AEY +P +
Sbjct: 474 VVGGFVRDLLLGIKNLDVDIVVEGN-----ALEFAEYAKR----------FLPGKLVKHD 518
Query: 158 HLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA++ L L ID R E Y +++P + T ++D YRRD TIN++ +N
Sbjct: 519 KFMTASLFLKGGLRIDIATARLEYYESPAKLPDVEISTIKKDLYRRDFTINAMAIKLNPK 578
Query: 217 S---VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+ D G G DLK G V + +F+DDP R+LRAIRF RFDF + EE +
Sbjct: 579 DFGLLIDFFG-GYRDLKEG--VIRVLHTLSFVDDPTRILRAIRFEQRFDFRI-EETTERL 634
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
V+ + + R+ E++ ++ P+K++ +
Sbjct: 635 LKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSIRRMA 673
>gi|407278527|ref|ZP_11106997.1| polynucleotide adenylyltransferase [Rhodococcus sp. P14]
Length = 484
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 33/222 (14%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPS-- 151
L + GG VRD +LG+ D+D D A++ TG FG I +
Sbjct: 43 LYLVGGSVRDAVLGRLGTDLDFTTDARPEQVQALLRGWADHQWDTG----IDFGTISAVK 98
Query: 152 NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLF 210
P+Q I+ R + Y +R P + +GT E+D RRD T+N++
Sbjct: 99 GPEQ---------------IEITTFRSDAYDRVTRHPIVEYGTRLEDDLVRRDFTVNAMA 143
Query: 211 YNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
I + ED G+ L G I TP P +F DDPLR+LRA RF ++ F L E
Sbjct: 144 VRIGPTGAEDFVDPLGGMDALLAGVIDTPALPSESFHDDPLRMLRAARFVSQLGFGLAER 203
Query: 269 LKKA--AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+ A A +DE+ +IS ERV E+D ++ G+ P++ +
Sbjct: 204 VHDAIVAMADEI-----LRISAERVQAELDKLILGDYPIEGI 240
>gi|295837774|ref|ZP_06824707.1| tRNA adenylyltransferase [Streptomyces sp. SPB74]
gi|295826667|gb|EDY45863.2| tRNA adenylyltransferase [Streptomyces sp. SPB74]
Length = 489
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D A V + A E + FG +
Sbjct: 44 LALVGGSVRDALLGRLGNDLDFTTDARPEDVLAL-VRPWADAVWEVGIA-FGTVGCQKAA 101
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
E + + I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 102 RVGEEEQSFQ-----IEVTTYRSEAYDRTSRKPKVSYGDSIEEDLVRRDFTVNAMAVFLP 156
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+A+F DDPLR+LRA RF A+ DF + A
Sbjct: 157 EKRFVDPHG-GLDDLAAKVLRTPGTPEASFSDDPLRMLRAARFAAQLDFEV--------A 207
Query: 275 SDEVKA--ALAAKI---SRERVGTEIDLMVSGNQPVKAM 308
+D V A A+A +I S ERV E++ ++ PVK +
Sbjct: 208 ADVVAAMTAMAERIGIVSAERVQAELNKLLLSAHPVKGL 246
>gi|302520496|ref|ZP_07272838.1| tRNA adenylyltransferase [Streptomyces sp. SPB78]
gi|302429391|gb|EFL01207.1| tRNA adenylyltransferase [Streptomyces sp. SPB78]
Length = 475
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D A V + A E + FG +
Sbjct: 30 LALVGGSVRDALLGRLGNDLDFTTDARPEDVLAL-VRPWADAVWEVGIA-FGTVGCQKAA 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
E + + I+ R E Y +SR P + +G + EED RRD T+N++ +
Sbjct: 88 RVGEEEQSFQ-----IEVTTYRSEAYDRSSRKPQVSYGDSIEEDLVRRDFTVNAMAVFLP 142
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+A+F DDPLR+LRA RF A+ DF + E+ A
Sbjct: 143 EKRFVDPHG-GLDDLAAKVLRTPGTPEASFSDDPLRMLRAARFAAQLDFEVAPEVVAAM- 200
Query: 275 SDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAM 308
A+A +I S ERV E++ ++ PVK +
Sbjct: 201 -----TAMAERIDIVSAERVQGELNKLLLSAHPVKGL 232
>gi|376294335|ref|YP_005166009.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae HC02]
gi|372111658|gb|AEX77718.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae HC02]
Length = 495
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 104/230 (45%), Gaps = 23/230 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LL + +D+D D A + EY +T FG + + D
Sbjct: 57 LYLVGGSVRDALLDELGHDLDFTTDARPDVVSAI-LEEYAPVVWDTGIE-FGTVSAEKDG 114
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNI- 213
+ I+ R + Y SR P ++FG T E D RRD T+N++ I
Sbjct: 115 QQ-------------IEITTFRSDVYDGQSRNPEVQFGDTLEGDLIRRDFTVNAMAMEIL 161
Query: 214 --NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
+ D G G+ DL G + TP P+ +F DDPLR+LRA RF ++ F L ++
Sbjct: 162 PDGSMQFHDPVG-GMDDLAAGLLDTPAAPQQSFNDDPLRMLRAARFVSQLGFDLAPRVRH 220
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
A A +I+ ERV E+D M+ G P + + L I++
Sbjct: 221 AMTE---MADQITRITAERVQVELDKMICGKAPWDGIDVMVDTGLADIIY 267
>gi|297616726|ref|YP_003701885.1| hypothetical protein Slip_0536 [Syntrophothermus lipocalidus DSM
12680]
gi|297144563|gb|ADI01320.1| CBS domain containing protein [Syntrophothermus lipocalidus DSM
12680]
Length = 879
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 21/221 (9%)
Query: 91 NLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIP 150
+L ++ + GG VRD LLG YDID+ ++ G FA +A+ L
Sbjct: 475 DLGFMVYMVGGIVRDLLLGVPNYDIDLVVEGE-GLVFARALAQRLGGRARV--------- 524
Query: 151 SNPDQSKHLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSL 209
+ +TA + L D + ID R E Y + +P + + ED YRRD TIN++
Sbjct: 525 -----HERFQTAVVVLPDGFKIDVATARTEYYEFPAALPVVHRSSIREDLYRRDFTINTM 579
Query: 210 FYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDE 267
+N +L G DLK G I + +F++DP R+LRAIRF R+ F ++
Sbjct: 580 AICLNPGRFGELIDYFGGRKDLKEGLI--RILYNLSFVEDPTRILRAIRFEQRYKFQIEA 637
Query: 268 ELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
E + A D + L K+S +R+ E+ L++ P+ A+
Sbjct: 638 ETLR-LARDAIDRRLLGKLSHKRILHELILILEEKDPLPAL 677
>gi|452959135|gb|EME64476.1| polynucleotide adenylyltransferase [Rhodococcus ruber BKS 20-38]
Length = 484
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 33/222 (14%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPS-- 151
L + GG VRD +LG+ D+D D A++ TG FG I +
Sbjct: 43 LYLVGGSVRDAVLGRLGTDLDFTTDARPEQVQALLRGWADHQWDTG----IDFGTISAVK 98
Query: 152 NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLF 210
P+Q I+ R + Y +R P + +GT E+D RRD T+N++
Sbjct: 99 GPEQ---------------IEITTFRSDAYDRVTRHPIVEYGTRLEDDLVRRDFTVNAMA 143
Query: 211 YNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
I + ED G+ L G I TP P +F DDPLR+LRA RF ++ F L E
Sbjct: 144 VRIGPTGAEDFVDPLGGMDALIAGVIDTPALPSESFHDDPLRMLRAARFVSQLGFGLAER 203
Query: 269 LKKA--AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+ A A +DE+ +IS ERV E+D ++ G+ P++ +
Sbjct: 204 VHDAIVAMADEI-----LRISAERVQAELDKLILGDYPIEGI 240
>gi|358445878|ref|ZP_09156462.1| putative tRNA adenylyltransferase [Corynebacterium casei UCMA 3821]
gi|356608163|emb|CCE54746.1| putative tRNA adenylyltransferase [Corynebacterium casei UCMA 3821]
Length = 478
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 29/261 (11%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
+ + S L++ H L + GG VRD LLG+ D+D D V E L
Sbjct: 23 SDLLSGLISEFSHRG--HSLYLVGGSVRDALLGRLGNDLDFTTDAR-----PEVVHEILD 75
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TA 195
ET D T + I+ R + Y +SR P + FG T
Sbjct: 76 GWAET----------TWDTGIEFGTVSAVYKGQQIEITTFRADLYDGDSRNPEVTFGNTL 125
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
++D RRD +N++ + + G+ DL+ G + TP P+ +F DDPLR+LR
Sbjct: 126 DDDLIRRDFKVNAMAIELRAEGTREFFDPMEGLKDLRAGIMDTPDAPELSFRDDPLRMLR 185
Query: 254 AIRFGARFDFILDEELKKAAA--SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
A RF ++ F + + ++KA ++E++ +I+ ER+ E+D M+ G P + +
Sbjct: 186 AARFVSQLQFSVSDRVRKAMTDMAEEIR-----RITVERIQVEMDKMILGAAPWDGIDLL 240
Query: 312 CGLTLFWIVF-KLP-LQVEPE 330
L I+F ++P + +EP+
Sbjct: 241 VETGLAQIIFPEIPAMAMEPD 261
>gi|318058987|ref|ZP_07977710.1| RNA nucleotidyltransferase [Streptomyces sp. SA3_actG]
gi|318078637|ref|ZP_07985969.1| RNA nucleotidyltransferase [Streptomyces sp. SA3_actF]
gi|333025736|ref|ZP_08453800.1| putative RNA nucleotidyltransferase [Streptomyces sp. Tu6071]
gi|332745588|gb|EGJ76029.1| putative RNA nucleotidyltransferase [Streptomyces sp. Tu6071]
Length = 475
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D A V + A E + FG +
Sbjct: 30 LALVGGSVRDALLGRLGNDLDFTTDARPEDVLAL-VRPWADAVWEVGIA-FGTVGCQKAA 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
E + + I+ R E Y +SR P + +G + EED RRD T+N++ +
Sbjct: 88 RVGEEEQSFQ-----IEVTTYRSEAYDRSSRKPQVSYGDSIEEDLVRRDFTVNAMAVFLP 142
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+A+F DDPLR+LRA RF A+ DF + E+ A
Sbjct: 143 EKRFVDPHG-GLDDLAAKVLRTPGTPEASFSDDPLRMLRAARFAAQLDFEVAPEVVAAM- 200
Query: 275 SDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAM 308
A+A +I S ERV E++ ++ PVK +
Sbjct: 201 -----TAMAERIDIVSAERVQGELNKLLLSAHPVKGL 232
>gi|76789444|ref|YP_328530.1| polyA polymerase [Chlamydia trachomatis A/HAR-13]
gi|237803134|ref|YP_002888328.1| polyA polymerase [Chlamydia trachomatis B/Jali20/OT]
gi|237805055|ref|YP_002889209.1| polyA polymerase [Chlamydia trachomatis B/TZ1A828/OT]
gi|376282714|ref|YP_005156540.1| polyA polymerase [Chlamydia trachomatis A2497]
gi|385270431|ref|YP_005813591.1| Poly(A) polymerase [Chlamydia trachomatis A2497]
gi|76167974|gb|AAX50982.1| polyA polymerase [Chlamydia trachomatis A/HAR-13]
gi|231273355|emb|CAX10270.1| polyA polymerase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274368|emb|CAX11163.1| polyA polymerase [Chlamydia trachomatis B/Jali20/OT]
gi|347975571|gb|AEP35592.1| Poly(A) polymerase [Chlamydia trachomatis A2497]
gi|371908744|emb|CAX09376.1| polyA polymerase [Chlamydia trachomatis A2497]
gi|438690642|emb|CCP49899.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis A/7249]
gi|438691727|emb|CCP49001.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis A/5291]
gi|438693100|emb|CCP48102.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis A/363]
Length = 410
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 159/366 (43%), Gaps = 66/366 (18%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
+T + ++ ++ LR+ + GG VRD LLG+ ++DIA N + T
Sbjct: 1 MTQSTLEVAKKIVRKLRNAGYQAYF--VGGSVRDMLLGRPIEEVDIA-TNASPTIITTIF 57
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
+ LS + FG+I + + E AT + EDY + +
Sbjct: 58 PDTLSIG-----AAFGIIAVK-ENGQLFEVATFR-----------SDEDYEDGRHPNRVV 100
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
F + ++DA RRD TIN ++Y+ + DL G ADL+ I PK FL+D LR+
Sbjct: 101 FASMKDDAIRRDFTINGMYYDPFEEKLFDLV-EGRADLERKIIRAIGHPKQRFLEDKLRI 159
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
LRAIRF A F LD + ++A + +L +S ER+ E+ M+ P +++ +
Sbjct: 160 LRAIRFAATLGFALDPQTEQAIIKE--LPSLPNSVSPERIWQELKKMLR-TAPYESLQLL 216
Query: 312 CGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAAL 371
L + I+F PE+ ++ + +L +A Q I S + AL
Sbjct: 217 TKLKVLPILF-------PEL----KVSSSGFLRSAIAFAQKIHDSQIPE--------IAL 257
Query: 372 FLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIH----RVLEKFLSLIPSLV 427
LP FR+ K KA +A + + + ++LE + + +P +
Sbjct: 258 LLPL-------------------FREVDKEKALEAFSRLRVSNKELKLLEDWYAALPQFL 298
Query: 428 SAEDVK 433
S ++ K
Sbjct: 299 SKQNDK 304
>gi|109521445|ref|YP_655873.1| gp8 [Mycobacterium phage Wildcat]
gi|91980897|gb|ABE67613.1| gp8 [Mycobacterium phage Wildcat]
Length = 401
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDN--MMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
+ GG VRD LLG++ DIDIA D + S+ K E G FG
Sbjct: 21 LVGGTVRDMLLGRESQDIDIATDAPPEVSSDILRKWGEEFWDPGVR----FG-------- 68
Query: 156 SKHLETATMKLYDLWIDFVNLRC-EDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNI 213
T K D+ + R EDY++ R P +++G+ E D RRD TIN++ +I
Sbjct: 69 -----TVCAKKGDMEVQVTTFRAAEDYTQGDRHPKVQWGSHIENDLLRRDFTINAIAQHI 123
Query: 214 NTSSVEDLTGRGIA--DLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF-DFILDEELK 270
+ TGR A D+ + TP+ P +F DDPLR++RA RF A+ DF + E
Sbjct: 124 DPDGHVTWTGRAQAFSDINRRILRTPINPIKSFTDDPLRLIRAARFQAQLPDFSVATETW 183
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
+ E A ++ ER+ E++ M+ QP K
Sbjct: 184 EGM---ESCAPHIRNVASERIVAELEKMLLAPQPFKG 217
>gi|299143658|ref|ZP_07036738.1| polyA polymerase family protein [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518143|gb|EFI41882.1| polyA polymerase family protein [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 440
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 105/226 (46%), Gaps = 24/226 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG +RD LL + +D DIA D E +YL F I K
Sbjct: 21 IVGGSLRDMLLDRIPFDFDIATD-AKPYEIEEIFEDYL----------FYSI------GK 63
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA--EEDAYRRDLTINSLFYNINT 215
T T+K D ++ R E EN R PT F T EED RRD TIN++ + N
Sbjct: 64 KYGTITIKYKDYIVELTTFRKEGIYENHRYPTEVFFTENIEEDLKRRDFTINAMAMDGNG 123
Query: 216 SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+ + DL GI+D+K I T +D LR+LRAIRF DF LD +LK A
Sbjct: 124 NII-DLYS-GISDIKSRVIRTVGNADDRICEDALRILRAIRFAGTLDFKLDCDLKDAIIK 181
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+ +L IS+ER+ +E + ++ P K++ + + I++
Sbjct: 182 NR---SLLNNISKERIASEFNKILLSEMPSKSLKLMADTKVLDIIY 224
>gi|386025234|ref|YP_005943540.1| CCA-adding enzyme [Propionibacterium acnes 266]
gi|422383891|ref|ZP_16464032.1| tRNA adenylyltransferase [Propionibacterium acnes HL096PA3]
gi|422429512|ref|ZP_16506417.1| tRNA adenylyltransferase [Propionibacterium acnes HL072PA2]
gi|422448062|ref|ZP_16524794.1| tRNA adenylyltransferase [Propionibacterium acnes HL036PA3]
gi|422479140|ref|ZP_16555550.1| tRNA adenylyltransferase [Propionibacterium acnes HL063PA1]
gi|422482107|ref|ZP_16558506.1| tRNA adenylyltransferase [Propionibacterium acnes HL036PA1]
gi|422488194|ref|ZP_16564525.1| tRNA adenylyltransferase [Propionibacterium acnes HL013PA2]
gi|422489630|ref|ZP_16565957.1| tRNA adenylyltransferase [Propionibacterium acnes HL020PA1]
gi|422497436|ref|ZP_16573709.1| tRNA adenylyltransferase [Propionibacterium acnes HL002PA3]
gi|422503640|ref|ZP_16579877.1| tRNA adenylyltransferase [Propionibacterium acnes HL027PA2]
gi|422504362|ref|ZP_16580596.1| tRNA adenylyltransferase [Propionibacterium acnes HL036PA2]
gi|422508834|ref|ZP_16584992.1| tRNA adenylyltransferase [Propionibacterium acnes HL046PA2]
gi|422513822|ref|ZP_16589943.1| tRNA adenylyltransferase [Propionibacterium acnes HL087PA2]
gi|422534780|ref|ZP_16610703.1| tRNA adenylyltransferase [Propionibacterium acnes HL072PA1]
gi|422567177|ref|ZP_16642803.1| tRNA adenylyltransferase [Propionibacterium acnes HL002PA2]
gi|313806788|gb|EFS45286.1| tRNA adenylyltransferase [Propionibacterium acnes HL087PA2]
gi|313817579|gb|EFS55293.1| tRNA adenylyltransferase [Propionibacterium acnes HL046PA2]
gi|313821595|gb|EFS59309.1| tRNA adenylyltransferase [Propionibacterium acnes HL036PA1]
gi|313824460|gb|EFS62174.1| tRNA adenylyltransferase [Propionibacterium acnes HL036PA2]
gi|313826807|gb|EFS64521.1| tRNA adenylyltransferase [Propionibacterium acnes HL063PA1]
gi|314926209|gb|EFS90040.1| tRNA adenylyltransferase [Propionibacterium acnes HL036PA3]
gi|314961597|gb|EFT05698.1| tRNA adenylyltransferase [Propionibacterium acnes HL002PA2]
gi|314979986|gb|EFT24080.1| tRNA adenylyltransferase [Propionibacterium acnes HL072PA2]
gi|315083014|gb|EFT54990.1| tRNA adenylyltransferase [Propionibacterium acnes HL027PA2]
gi|315086547|gb|EFT58523.1| tRNA adenylyltransferase [Propionibacterium acnes HL002PA3]
gi|315087950|gb|EFT59926.1| tRNA adenylyltransferase [Propionibacterium acnes HL072PA1]
gi|327334060|gb|EGE75775.1| tRNA adenylyltransferase [Propionibacterium acnes HL096PA3]
gi|327444535|gb|EGE91189.1| tRNA adenylyltransferase [Propionibacterium acnes HL013PA2]
gi|328758040|gb|EGF71656.1| tRNA adenylyltransferase [Propionibacterium acnes HL020PA1]
gi|332676693|gb|AEE73509.1| CCA-adding enzyme [Propionibacterium acnes 266]
Length = 507
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + ++ AT + FG I + D
Sbjct: 67 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRQHTHATWDIG-RAFGTIGAQID- 123
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T ++D RRD T+N++ +
Sbjct: 124 ------------DWVVEVTTYRADAYHPDSRKPEIVYGETLKDDLIRRDFTVNAMALHAA 171
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+ D+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 172 TRTFSDPYA-GLTDIVSGILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 229
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 230 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 261
>gi|119964423|ref|YP_949860.1| RNA nucleotidyltransferase [Arthrobacter aurescens TC1]
gi|119951282|gb|ABM10193.1| putative RNA nucleotidyltransferase [Arthrobacter aurescens TC1]
Length = 488
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 28/214 (13%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT--KVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LG+ D+D D + K A+ G FG I
Sbjct: 32 LSLVGGPVRDLFLGRTSPDLDFTTDATPDQTISVIKKWADNFWEIGRA----FGTI---- 83
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
MK I+ R E Y +SR P + FG++ +D RRD TIN++
Sbjct: 84 ---------GMKKSGFQIEITTYRAEAYDPDSRKPVVAFGSSLTDDLLRRDFTINAMALR 134
Query: 213 INTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + + D G G+ DL ++ TP P+A+F DDPLR++RA RF ++ + ++++ A
Sbjct: 135 LPSLELVDPFG-GVRDLHASELATPGAPEASFSDDPLRMMRAARFASQLGVSVHDDVRLA 193
Query: 273 AA--SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ +D +K IS ERV E+ +++G P
Sbjct: 194 MSQMADRIKI-----ISAERVREELVKLINGTHP 222
>gi|15605437|ref|NP_220223.1| polyA polymerase [Chlamydia trachomatis D/UW-3/CX]
gi|166154921|ref|YP_001653176.1| polyA polymerase [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|339625450|ref|YP_004716929.1| poly A polymerase head domain-containing protein [Chlamydia
trachomatis L2c]
gi|385243912|ref|YP_005811758.1| Poly(A) polymerase [Chlamydia trachomatis D-EC]
gi|385244792|ref|YP_005812636.1| Poly(A) polymerase [Chlamydia trachomatis D-LC]
gi|3329159|gb|AAC68299.1| Poly A Polymerase [Chlamydia trachomatis D/UW-3/CX]
gi|165930909|emb|CAP06471.1| polyA polymerase [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|297748835|gb|ADI51381.1| Poly(A) polymerase [Chlamydia trachomatis D-EC]
gi|297749715|gb|ADI52393.1| Poly(A) polymerase [Chlamydia trachomatis D-LC]
gi|339461028|gb|AEJ77531.1| poly A polymerase head domain protein [Chlamydia trachomatis L2c]
gi|440526519|emb|CCP52003.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L2b/8200/07]
gi|440528308|emb|CCP53792.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis D/SotonD5]
gi|440532773|emb|CCP58283.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis G/SotonG1]
gi|440536343|emb|CCP61856.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L2b/795]
gi|440537237|emb|CCP62751.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L1/440/LN]
gi|440538126|emb|CCP63640.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L1/1322/p2]
gi|440539016|emb|CCP64530.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L1/115]
gi|440539905|emb|CCP65419.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L1/224]
gi|440541684|emb|CCP67198.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L3/404/LN]
gi|440542572|emb|CCP68086.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L2b/UCH-2]
gi|440543463|emb|CCP68977.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L2b/Canada2]
gi|440544354|emb|CCP69868.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L2b/LST]
gi|440545244|emb|CCP70758.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L2b/Ams1]
gi|440546134|emb|CCP71648.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L2b/CV204]
gi|440914396|emb|CCP90813.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L2b/Ams2]
gi|440915286|emb|CCP91703.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L2b/Ams3]
gi|440916178|emb|CCP92595.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L2b/Canada1]
gi|440917071|emb|CCP93488.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L2b/Ams4]
gi|440917962|emb|CCP94379.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L2b/Ams5]
Length = 410
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 159/366 (43%), Gaps = 66/366 (18%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
+T + ++ ++ LR+ + GG VRD LLG+ ++DIA N + T
Sbjct: 1 MTQSTLEVAKKIVRKLRNAGYQAYF--VGGSVRDMLLGRPIEEVDIA-TNASPTIVTTIF 57
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
+ LS + FG+I + + E AT + EDY + +
Sbjct: 58 PDTLSIG-----AAFGIIAVK-ENGQLFEVATFR-----------SDEDYEDGRHPNRVV 100
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
F + ++DA RRD TIN ++Y+ + DL G ADL+ I PK FL+D LR+
Sbjct: 101 FASMKDDAIRRDFTINGMYYDPFEEKLFDLV-EGRADLERKIIRAIGHPKQRFLEDKLRI 159
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
LRAIRF A F LD + ++A + +L +S ER+ E+ M+ P +++ +
Sbjct: 160 LRAIRFAATLGFALDPQTEQAIIKE--LPSLPNSVSPERIWQELKKMLR-TAPYESLQLL 216
Query: 312 CGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAAL 371
L + I+F PE+ ++ + +L +A Q I S + AL
Sbjct: 217 TKLKVLPILF-------PEL----KVSSSGFLRSAIAFAQKIHDSQIPE--------IAL 257
Query: 372 FLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIH----RVLEKFLSLIPSLV 427
LP FR+ K KA +A + + + ++LE + + +P +
Sbjct: 258 LLPL-------------------FREVDKEKALEAFSRLRVSNKELKLLEDWYAALPQFL 298
Query: 428 SAEDVK 433
S ++ K
Sbjct: 299 SKQNDK 304
>gi|403529344|ref|YP_006664231.1| CCA-adding enzyme [Arthrobacter sp. Rue61a]
gi|403231771|gb|AFR31193.1| CCA-adding enzyme [Arthrobacter sp. Rue61a]
Length = 488
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 28/214 (13%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT--KVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LG+ D+D D + K A+ G FG I
Sbjct: 32 LSLVGGPVRDLFLGRTSPDLDFTTDATPDQTISVIKKWADNFWEIGRA----FGTI---- 83
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
MK I+ R E Y +SR P + FG++ +D RRD TIN++
Sbjct: 84 ---------GMKKSGFQIEITTYRAEAYDPDSRKPVVAFGSSLTDDLLRRDFTINAMALR 134
Query: 213 INTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + + D G G+ DL ++ TP P+A+F DDPLR++RA RF ++ + ++++ A
Sbjct: 135 LPSLELVDPFG-GVRDLHASELATPGAPEASFSDDPLRMMRAARFASQLGVSVHDDVRLA 193
Query: 273 AA--SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ +D +K IS ERV E+ +++G P
Sbjct: 194 MSQMADRIKI-----ISAERVREELVKLINGTHP 222
>gi|62185492|ref|YP_220277.1| poly A polymerase [Chlamydophila abortus S26/3]
gi|62148559|emb|CAH64330.1| putative poly A polymerase [Chlamydophila abortus S26/3]
Length = 410
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 112/243 (46%), Gaps = 28/243 (11%)
Query: 100 GGWVRDKLLGKDCYDIDIALDN---MMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
GG VRD L+GK +IDIA ++ + F +A + FG+I + +
Sbjct: 27 GGCVRDMLMGKPIEEIDIATSAPPVIVSTIFPDTLA---------IGAAFGIIVVK-ENN 76
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
+ E AT + E+Y++ + F + +EDA RRD TIN ++Y+
Sbjct: 77 RLFEVATFR-----------SDENYTDGRHPERVIFSSMKEDALRRDFTINGMYYDPFEE 125
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
+ DL G DL+ I PK F +D LR+LRAIRF + F LD ++A +
Sbjct: 126 KLYDLV-EGRRDLEKRVIRAIGHPKLRFSEDKLRILRAIRFSSSLGFTLDPATERAIIKE 184
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCE 336
+L +S ER+ E+ M+ N P +A++ + L + I+F + P +L
Sbjct: 185 --APSLVCSVSPERIWQELKKMLKKN-PYEALSLLIQLKIMTIIFPELRDIPPSLLRTSS 241
Query: 337 MFC 339
F
Sbjct: 242 EFA 244
>gi|220914656|ref|YP_002489965.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Arthrobacter chlorophenolicus A6]
gi|219861534|gb|ACL41876.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Arthrobacter chlorophenolicus A6]
Length = 502
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 24/212 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA--TKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LG+ D+D D A K A+ G FG I
Sbjct: 35 LSLVGGPVRDLFLGRTSPDLDFTTDATPDQTVALIKKWADNFWEIGRA----FGTI---- 86
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
M+ I+ R E Y +SR P + FG++ +D RRD TIN++
Sbjct: 87 ---------GMRKAGFQIEITTYRAEAYDPDSRKPVVAFGSSLTDDLLRRDFTINAMALK 137
Query: 213 INTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ T + D G G+ DL + TP P+A+F DDPLR++RA RF ++ + ++++KA
Sbjct: 138 LPTMELVDPFG-GVRDLHASVLATPGSPEASFSDDPLRMMRAARFASQLGVSVHDDVRKA 196
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ + IS ER+ E+ +V G +P
Sbjct: 197 MTGMAERITI---ISAERIRDELVKLVCGARP 225
>gi|422494720|ref|ZP_16571015.1| tRNA adenylyltransferase [Propionibacterium acnes HL025PA1]
gi|313814283|gb|EFS51997.1| tRNA adenylyltransferase [Propionibacterium acnes HL025PA1]
Length = 507
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + ++ AT + FG I + D
Sbjct: 67 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRQHTHATWDIG-RAFGTIGAQID- 123
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T ++D RRD T+N++ +
Sbjct: 124 ------------DWVVEVTTYRADAYHPDSRKPEIVYGETLKDDLIRRDFTVNAMALHAA 171
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+ D+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 172 TRTFSDPYA-GLTDIVSGILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 229
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 230 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 261
>gi|422386719|ref|ZP_16466836.1| tRNA adenylyltransferase [Propionibacterium acnes HL096PA2]
gi|422393885|ref|ZP_16473932.1| tRNA adenylyltransferase [Propionibacterium acnes HL099PA1]
gi|422423899|ref|ZP_16500850.1| tRNA adenylyltransferase [Propionibacterium acnes HL043PA1]
gi|422455558|ref|ZP_16532228.1| tRNA adenylyltransferase [Propionibacterium acnes HL030PA1]
gi|422461017|ref|ZP_16537651.1| tRNA adenylyltransferase [Propionibacterium acnes HL038PA1]
gi|422475595|ref|ZP_16552040.1| tRNA adenylyltransferase [Propionibacterium acnes HL056PA1]
gi|422476161|ref|ZP_16552600.1| tRNA adenylyltransferase [Propionibacterium acnes HL007PA1]
gi|422485088|ref|ZP_16561455.1| tRNA adenylyltransferase [Propionibacterium acnes HL043PA2]
gi|422519811|ref|ZP_16595857.1| tRNA adenylyltransferase [Propionibacterium acnes HL074PA1]
gi|422520220|ref|ZP_16596262.1| tRNA adenylyltransferase [Propionibacterium acnes HL045PA1]
gi|422525298|ref|ZP_16601300.1| tRNA adenylyltransferase [Propionibacterium acnes HL083PA1]
gi|422527748|ref|ZP_16603735.1| tRNA adenylyltransferase [Propionibacterium acnes HL053PA1]
gi|422541670|ref|ZP_16617528.1| tRNA adenylyltransferase [Propionibacterium acnes HL037PA1]
gi|422559627|ref|ZP_16635355.1| tRNA adenylyltransferase [Propionibacterium acnes HL005PA1]
gi|313771128|gb|EFS37094.1| tRNA adenylyltransferase [Propionibacterium acnes HL074PA1]
gi|313811705|gb|EFS49419.1| tRNA adenylyltransferase [Propionibacterium acnes HL083PA1]
gi|313832472|gb|EFS70186.1| tRNA adenylyltransferase [Propionibacterium acnes HL007PA1]
gi|313832699|gb|EFS70413.1| tRNA adenylyltransferase [Propionibacterium acnes HL056PA1]
gi|314969145|gb|EFT13243.1| tRNA adenylyltransferase [Propionibacterium acnes HL037PA1]
gi|314975136|gb|EFT19231.1| tRNA adenylyltransferase [Propionibacterium acnes HL053PA1]
gi|314977547|gb|EFT21642.1| tRNA adenylyltransferase [Propionibacterium acnes HL045PA1]
gi|314985106|gb|EFT29198.1| tRNA adenylyltransferase [Propionibacterium acnes HL005PA1]
gi|315096968|gb|EFT68944.1| tRNA adenylyltransferase [Propionibacterium acnes HL038PA1]
gi|315107385|gb|EFT79361.1| tRNA adenylyltransferase [Propionibacterium acnes HL030PA1]
gi|327332438|gb|EGE74173.1| tRNA adenylyltransferase [Propionibacterium acnes HL096PA2]
gi|327446787|gb|EGE93441.1| tRNA adenylyltransferase [Propionibacterium acnes HL043PA2]
gi|327448772|gb|EGE95426.1| tRNA adenylyltransferase [Propionibacterium acnes HL043PA1]
gi|328759834|gb|EGF73424.1| tRNA adenylyltransferase [Propionibacterium acnes HL099PA1]
Length = 507
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + ++ AT + FG I + D
Sbjct: 67 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRQHTHATWDIG-RAFGTIGAQID- 123
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T ++D RRD T+N++ +
Sbjct: 124 ------------DWVVEVTTYRADAYHPDSRKPEIVYGETLKDDLIRRDFTVNAMALHAA 171
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+ D+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 172 TRTFSDPYA-GLTDIVSGILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 229
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 230 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 261
>gi|406899397|gb|EKD42682.1| polynucleotide adenylyltransferase region, partial [uncultured
bacterium]
Length = 297
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 42/221 (19%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEY--LSATGETAPSGFGVIPSNPDQ 155
V GG VRD+LLG+ D+D+ + + E + Y ++ G++ FGVI P Q
Sbjct: 23 VVGGNVRDQLLGRAGKDLDLLVRLIPYDELCETLKNYGMVNVVGKS----FGVIKFRPRQ 78
Query: 156 SK---------HLETATMKLY-DLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLT 205
+E +T + D +DF N +IP E+D RRD T
Sbjct: 79 DPTEEIDISLPRIEKSTGSGHKDFLVDF----------NPQIPV------EQDLARRDFT 122
Query: 206 INSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFIL 265
IN++ Y++ T + D G G DLK +I F++DPLR+LRA++F ARF+F++
Sbjct: 123 INAMAYDLATGQIIDPFG-GQEDLKKKQIRQVF--IEAFIEDPLRMLRAVQFAARFNFVI 179
Query: 266 DEELKKAAASDEVK--AALAAKISRERVGTEIDLMVSGNQP 304
+ A + +K AAL +S+ER+ EI + S +P
Sbjct: 180 E-----AQTFNFIKEHAALIQTVSKERIILEIKKLFSAEKP 215
>gi|422551346|ref|ZP_16627139.1| tRNA adenylyltransferase [Propionibacterium acnes HL005PA3]
gi|422555209|ref|ZP_16630979.1| tRNA adenylyltransferase [Propionibacterium acnes HL005PA2]
gi|314987177|gb|EFT31269.1| tRNA adenylyltransferase [Propionibacterium acnes HL005PA2]
gi|314990621|gb|EFT34712.1| tRNA adenylyltransferase [Propionibacterium acnes HL005PA3]
Length = 507
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + ++ AT + FG I + D
Sbjct: 67 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRQHTHATWDIG-RAFGTIGAQID- 123
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T ++D RRD T+N++ +
Sbjct: 124 ------------DWVVEVTTYRADAYHPDSRKPEIVYGETLKDDLIRRDFTVNAMALHAA 171
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+ D+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 172 TRTFSDPYA-GLTDIVSGILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 229
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 230 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 261
>gi|451945519|ref|YP_007466155.1| tRNA nucleotidyltransferase [Corynebacterium halotolerans YIM 70093
= DSM 44683]
gi|451904906|gb|AGF73793.1| tRNA nucleotidyltransferase [Corynebacterium halotolerans YIM 70093
= DSM 44683]
Length = 530
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 106/233 (45%), Gaps = 25/233 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D V E L A GV+ D
Sbjct: 67 LHLVGGSVRDAILGRLGNDLDFTT-----PARPEVVKEILDAHA-------GVVW---DT 111
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
T + ++ I+ R + Y SR P +RFG T + D RRD +N++ +
Sbjct: 112 GIAFGTVSAQMRGQQIEITTFRSDTYDGTSRNPEVRFGDTLDGDLIRRDFKVNAMAVELV 171
Query: 215 TSSVEDLTGR------GIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
LTGR G+ DL H ++ TP P+++F DDPLR+LRA RF ++ F + +
Sbjct: 172 AGDDGRLTGRFHDPVGGLDDLLHRRLDTPDTPESSFNDDPLRMLRAARFVSQLGFGVADR 231
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+K A A +I+ ERV E+D +++G P + + L VF
Sbjct: 232 VKTAMTE---MAGQITRITAERVQVELDKLMAGPAPWTGVNLLVDTGLAGHVF 281
>gi|296081114|emb|CBI18308.3| unnamed protein product [Vitis vinifera]
Length = 84
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/70 (52%), Positives = 56/70 (80%)
Query: 388 IPVVNYTFRDSLKRKASDAETVMNIHRVLEKFLSLIPSLVSAEDVKVNDGQWSKELVDVP 447
IPVVN+ R+SLK +ASDA+TV++IH +EKF+SLIP + S E +++++ +W E++D+P
Sbjct: 12 IPVVNHIIRNSLKLRASDADTVVSIHCAVEKFMSLIPFIESTESIQISEAEWGIEILDLP 71
Query: 448 DASKLRVLTG 457
SKLR+LTG
Sbjct: 72 VTSKLRILTG 81
>gi|72163501|ref|YP_291158.1| metal-dependent phosphohydrolase [Thermobifida fusca YX]
gi|71917233|gb|AAZ57135.1| metal-dependent phosphohydrolase [Thermobifida fusca YX]
Length = 552
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ +DID+ D + +V E + + + G+
Sbjct: 105 LAIVGGPVRDALLGRPVHDIDLTTDAV-----PERVLELVDGWADAVWT-IGI------- 151
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T ++ ++ R E Y SR P + +GT+ ED RRD T+N++ +
Sbjct: 152 --EFGTVGLRKNGRQVEITTYRSESYQVKSRKPEVSYGTSLYEDLVRRDFTVNAMAVRVP 209
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+ +F DDPLR++R IRF A+ F +DE K AA
Sbjct: 210 GGEFVDPFG-GLRDLADRTLRTPGKPEDSFNDDPLRIMRGIRFAAQLGFSVDE---KVAA 265
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ A +S ER+ E+ ++ P
Sbjct: 266 AMTAMAERLRIVSAERIRDELTKLILSPNP 295
>gi|335051012|ref|ZP_08543952.1| tRNA adenylyltransferase [Propionibacterium sp. 409-HC1]
gi|342211246|ref|ZP_08703971.1| CCA tRNA nucleotidyltransferase [Propionibacterium sp. CC003-HC2]
gi|333768209|gb|EGL45409.1| tRNA adenylyltransferase [Propionibacterium sp. 409-HC1]
gi|340766790|gb|EGR89315.1| CCA tRNA nucleotidyltransferase [Propionibacterium sp. CC003-HC2]
Length = 499
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + ++ AT + FG I + D
Sbjct: 59 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRQHTHATWDIG-RAFGTIGAQID- 115
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T ++D RRD T+N++ +
Sbjct: 116 ------------DWVVEVTTYRADAYHPDSRKPEIVYGETLKDDLIRRDFTVNAMALHAA 163
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+ D+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 164 TRTFSDPYA-GLTDIVSGILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 221
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 222 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 253
>gi|289427314|ref|ZP_06429027.1| tRNA adenylyltransferase [Propionibacterium acnes J165]
gi|289159244|gb|EFD07435.1| tRNA adenylyltransferase [Propionibacterium acnes J165]
Length = 499
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + ++ AT + FG I + D
Sbjct: 59 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRQHTHATWDIG-RAFGTIGAQID- 115
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T ++D RRD T+N++ +
Sbjct: 116 ------------DWVVEVTTYRADAYHPDSRKPEIVYGETLKDDLIRRDFTVNAMALHAA 163
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+ D+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 164 TRTFSDPYA-GLTDIVSGILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 221
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 222 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 253
>gi|305681647|ref|ZP_07404453.1| tRNA adenylyltransferase [Corynebacterium matruchotii ATCC 14266]
gi|305658807|gb|EFM48308.1| tRNA adenylyltransferase [Corynebacterium matruchotii ATCC 14266]
Length = 506
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 112/261 (42%), Gaps = 50/261 (19%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLR-----VAGGWVRDKLLGKDCYDIDIALDNMM 123
+IE+ FS L+ ++ E R + GG VRD LLG+ D+D D
Sbjct: 6 EIEVLARAEASFSALMPIIQPLAAEFNTRGHHLYLVGGSVRDALLGRLGNDVDFTTDAR- 64
Query: 124 GSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
E ++ E+ + +G + + + I+ R + Y
Sbjct: 65 -PETILEILEHFADITWDTGIEYGTVSAEKSGQQ-------------IEITTFRSDIYDG 110
Query: 184 NSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTSSVE-------------DLTGRGIADL 229
SR P + FG T D RRD TIN++ I ++ D G G ADL
Sbjct: 111 ESRNPEVVFGDTLAGDLVRRDFTINAMAVEITSAPDAAGATPAAAELEFFDPMG-GFADL 169
Query: 230 KHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAA---LAAKI 286
G I TP P +F DDPLR+LRA RF ++ F + SD V+AA LA++I
Sbjct: 170 MKGVIDTPAAPDQSFADDPLRLLRAARFSSQLGFTV---------SDRVRAAMTDLASEI 220
Query: 287 SR---ERVGTEIDLMVSGNQP 304
R ERV E+D M+ G QP
Sbjct: 221 QRITVERVQVELDKMLLGAQP 241
>gi|15828457|ref|NP_302720.1| hypothetical protein ML2697 [Mycobacterium leprae TN]
gi|221230934|ref|YP_002504350.1| pcnA [Mycobacterium leprae Br4923]
gi|13093887|emb|CAC32229.1| pcnA [Mycobacterium leprae]
gi|219934041|emb|CAR72797.1| pcnA [Mycobacterium leprae Br4923]
Length = 486
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 109/222 (49%), Gaps = 32/222 (14%)
Query: 96 LRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKV----AEYLSATGETAPSGFGVIP 150
L + GG VRD LLG+ D D+D A D G E ++ A+ L TG FG I
Sbjct: 41 LYLVGGSVRDALLGRLDSPDLDFATD--AGPEQVQQIMRRWADNLWETGIE----FGTIG 94
Query: 151 SNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSL 209
D ++ R + Y + SR P +RF ++D RRD T+N++
Sbjct: 95 VGKG-------------DYRLEITTFRADRYDQVSRNPEVRFSDRLDDDLVRRDFTVNAM 141
Query: 210 FYNINT---SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
I + D G G+A L+ + TP P +F DDPLR+LRA RF ++ F +
Sbjct: 142 AVRIASYGPGEFFDPLG-GLAALRVRVLETPAAPSVSFGDDPLRMLRAARFVSQLGFTVA 200
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
++ AA +E+ + L A+IS ERV TE+D ++ GN P +
Sbjct: 201 PQVH--AAIEEMASQL-ARISAERVSTELDKLLLGNDPAAGI 239
>gi|289424329|ref|ZP_06426112.1| tRNA adenylyltransferase [Propionibacterium acnes SK187]
gi|295131827|ref|YP_003582490.1| tRNA adenylyltransferase [Propionibacterium acnes SK137]
gi|335055345|ref|ZP_08548130.1| tRNA adenylyltransferase [Propionibacterium sp. 434-HC2]
gi|365963924|ref|YP_004945490.1| tRNA adenylyltransferase [Propionibacterium acnes TypeIA2 P.acn31]
gi|387504661|ref|YP_005945890.1| tRNA adenylyltransferase [Propionibacterium acnes 6609]
gi|407936671|ref|YP_006852313.1| tRNA adenylyltransferase [Propionibacterium acnes C1]
gi|417930622|ref|ZP_12573997.1| CCA tRNA nucleotidyltransferase [Propionibacterium acnes SK182]
gi|289155026|gb|EFD03708.1| tRNA adenylyltransferase [Propionibacterium acnes SK187]
gi|291375544|gb|ADD99398.1| tRNA adenylyltransferase [Propionibacterium acnes SK137]
gi|333762181|gb|EGL39688.1| tRNA adenylyltransferase [Propionibacterium sp. 434-HC2]
gi|335278706|gb|AEH30611.1| tRNA adenylyltransferase [Propionibacterium acnes 6609]
gi|340770006|gb|EGR92523.1| CCA tRNA nucleotidyltransferase [Propionibacterium acnes SK182]
gi|365740605|gb|AEW84807.1| tRNA adenylyltransferase [Propionibacterium acnes TypeIA2 P.acn31]
gi|407905252|gb|AFU42082.1| tRNA adenylyltransferase [Propionibacterium acnes C1]
Length = 499
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + ++ AT + FG I + D
Sbjct: 59 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRQHTHATWDIG-RAFGTIGAQID- 115
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T ++D RRD T+N++ +
Sbjct: 116 ------------DWVVEVTTYRADAYHPDSRKPEIVYGETLKDDLIRRDFTVNAMALHAA 163
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+ D+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 164 TRTFSDPYA-GLTDIVSGILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 221
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 222 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 253
>gi|422426670|ref|ZP_16503588.1| tRNA adenylyltransferase [Propionibacterium acnes HL087PA1]
gi|422432421|ref|ZP_16509291.1| tRNA adenylyltransferase [Propionibacterium acnes HL059PA2]
gi|422434547|ref|ZP_16511405.1| tRNA adenylyltransferase [Propionibacterium acnes HL083PA2]
gi|422442279|ref|ZP_16519082.1| tRNA adenylyltransferase [Propionibacterium acnes HL002PA1]
gi|422446062|ref|ZP_16522807.1| tRNA adenylyltransferase [Propionibacterium acnes HL027PA1]
gi|422452714|ref|ZP_16529410.1| tRNA adenylyltransferase [Propionibacterium acnes HL087PA3]
gi|422510996|ref|ZP_16587139.1| tRNA adenylyltransferase [Propionibacterium acnes HL059PA1]
gi|422538889|ref|ZP_16614763.1| tRNA adenylyltransferase [Propionibacterium acnes HL013PA1]
gi|422545975|ref|ZP_16621802.1| tRNA adenylyltransferase [Propionibacterium acnes HL050PA3]
gi|422550384|ref|ZP_16626181.1| tRNA adenylyltransferase [Propionibacterium acnes HL050PA1]
gi|422556737|ref|ZP_16632484.1| tRNA adenylyltransferase [Propionibacterium acnes HL025PA2]
gi|422561961|ref|ZP_16637639.1| tRNA adenylyltransferase [Propionibacterium acnes HL046PA1]
gi|422571043|ref|ZP_16646638.1| tRNA adenylyltransferase [Propionibacterium acnes HL067PA1]
gi|422577715|ref|ZP_16653244.1| tRNA adenylyltransferase [Propionibacterium acnes HL005PA4]
gi|313765090|gb|EFS36454.1| tRNA adenylyltransferase [Propionibacterium acnes HL013PA1]
gi|313815662|gb|EFS53376.1| tRNA adenylyltransferase [Propionibacterium acnes HL059PA1]
gi|314916152|gb|EFS79983.1| tRNA adenylyltransferase [Propionibacterium acnes HL005PA4]
gi|314917414|gb|EFS81245.1| tRNA adenylyltransferase [Propionibacterium acnes HL050PA1]
gi|314921754|gb|EFS85585.1| tRNA adenylyltransferase [Propionibacterium acnes HL050PA3]
gi|314930978|gb|EFS94809.1| tRNA adenylyltransferase [Propionibacterium acnes HL067PA1]
gi|314955350|gb|EFS99755.1| tRNA adenylyltransferase [Propionibacterium acnes HL027PA1]
gi|314959432|gb|EFT03534.1| tRNA adenylyltransferase [Propionibacterium acnes HL002PA1]
gi|315099405|gb|EFT71381.1| tRNA adenylyltransferase [Propionibacterium acnes HL059PA2]
gi|315102383|gb|EFT74359.1| tRNA adenylyltransferase [Propionibacterium acnes HL046PA1]
gi|327454192|gb|EGF00847.1| tRNA adenylyltransferase [Propionibacterium acnes HL087PA3]
gi|327456249|gb|EGF02904.1| tRNA adenylyltransferase [Propionibacterium acnes HL083PA2]
gi|328755949|gb|EGF69565.1| tRNA adenylyltransferase [Propionibacterium acnes HL087PA1]
gi|328758980|gb|EGF72596.1| tRNA adenylyltransferase [Propionibacterium acnes HL025PA2]
Length = 507
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + ++ AT + FG I + D
Sbjct: 67 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRQHTHATWDIG-RAFGTIGAQID- 123
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T ++D RRD T+N++ +
Sbjct: 124 ------------DWVVEVTTYRADAYHPDSRKPEIVYGETLKDDLIRRDFTVNAMALHAA 171
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+ D+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 172 TRTFSDPYA-GLTDIVSGILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 229
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 230 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 261
>gi|118465833|ref|YP_884405.1| tRNA adenylyltransferase [Mycobacterium avium 104]
gi|118167120|gb|ABK68017.1| tRNA adenylyltransferase [Mycobacterium avium 104]
Length = 480
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LLG+ D+D D + + A+ L TG FG
Sbjct: 39 LYLVGGSVRDALLGRLSPDLDFTTDARPDQVQQILRRWADNLWDTGIE----FG------ 88
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
T + D ++ R + Y + SR P +RFG E+D RRD T N++
Sbjct: 89 -------TVGVGKGDRRLEITTFRADTYDQVSRNPQVRFGNRLEDDLVRRDFTTNAMAVR 141
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I + G+A L+ + TP P+ +F DDPLR+LRA RF ++ F + ++
Sbjct: 142 ITPDGPGEFLDPLGGLAALRQRVLDTPATPEESFGDDPLRMLRAARFVSQLGFTVAPRVR 201
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+A E A A+IS ERV E+D +V G+ PV +
Sbjct: 202 EAI---ERMAPQLARISAERVAAELDKLVLGDDPVAGI 236
>gi|297627555|ref|YP_003689318.1| tRNA nucleotidyltransferase PcnB [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296923320|emb|CBL57920.1| tRNA nucleotidyltransferase PcnB [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 496
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ +D+D + ++ S+ T FG I ++
Sbjct: 40 LYLVGGSVRDALLGRLGHDLDFT--TSADPDTTERLLHRFSSAVWTVGKEFGTIGASKKS 97
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
+ H +L I+ R + Y +SR P + +G ++D RRD T+N++ +++
Sbjct: 98 NGH---------ELQIEITTFRADAYEPDSRKPIVAYGDNVQDDLVRRDFTVNAMAIDVH 148
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ + D G GI DL + TP P+ +F DDPLR++RA RF A+ F +D A
Sbjct: 149 SKAFVDPHG-GIRDLAAKVLRTPTAPEISFSDDPLRMMRACRFAAQLGFKVDPVTFNAMK 207
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF-KLP 324
+ + + +S ERV E+ ++ + P + + L IV +LP
Sbjct: 208 AMHERIEI---VSPERVRDELSKLLLADAPRPGLNLLVASGLADIVLPELP 255
>gi|365975104|ref|YP_004956663.1| tRNA adenylyltransferase [Propionibacterium acnes TypeIA2 P.acn33]
gi|365745103|gb|AEW80300.1| tRNA adenylyltransferase [Propionibacterium acnes TypeIA2 P.acn33]
Length = 499
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + ++ AT + FG I + D
Sbjct: 59 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRQHTHATWDIG-RAFGTIGAQID- 115
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T ++D RRD T+N++ +
Sbjct: 116 ------------DWVVEVTTYRADAYHPDSRKPEIVYGETLKDDLIRRDFTVNAMALHAA 163
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+ D+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 164 TRTFSDPYA-GLTDIVSGILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 221
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 222 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 253
>gi|376258196|ref|YP_005146087.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae VA01]
gi|372120713|gb|AEX84447.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae VA01]
Length = 495
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 104/230 (45%), Gaps = 23/230 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LL + +D+D D + + EY +T FG + + D
Sbjct: 57 LYLVGGSVRDALLDELGHDLDFTTD-ARPDVVSAILEEYAPVVWDTGIE-FGTVSAEKDG 114
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNI- 213
+ I+ R + Y SR P ++FG T E D RRD T+N++ I
Sbjct: 115 QQ-------------IEITTFRSDVYDGQSRNPEVQFGDTLEGDLIRRDFTVNAMAMEIL 161
Query: 214 --NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
+ D G G+ DL G + TP P+ +F DDPLR+LRA RF ++ F L ++
Sbjct: 162 PDGSMQFHDPVG-GMNDLAAGLLDTPAVPQQSFNDDPLRMLRAARFVSQLGFDLAPRVRH 220
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
A A +I+ ERV E+D M+ G P + + L I++
Sbjct: 221 AMTE---MADQITRITAERVQVELDKMICGKAPWDGIDVMVDTGLADIIY 267
>gi|443670696|ref|ZP_21135827.1| putative tRNA nucleotidyltransferase [Rhodococcus sp. AW25M09]
gi|443416728|emb|CCQ14164.1| putative tRNA nucleotidyltransferase [Rhodococcus sp. AW25M09]
Length = 488
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 21/220 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D + T ++ + +T + FG I + D
Sbjct: 50 LYLVGGTVRDAVLGRLGTDLDFTTD-ARPEDVQTLLSGWADHQWDTGIA-FGTISAAKDG 107
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R + Y + SR P +++G + EED RRD T+N++ +
Sbjct: 108 QQ-------------IEITTYRADSYDQVSRNPEVQYGNSLEEDLVRRDFTVNAMAVRLG 154
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ ++ G+ L G + TP P+ +F DDPLR+LRA RF ++ F L + +A
Sbjct: 155 SDGTQEFVDPLGGMDALLEGFLDTPSAPEVSFGDDPLRMLRAARFVSQLGFSLMPRVHRA 214
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
A +I+ ER+ E+D ++ G P+ + +C
Sbjct: 215 MTD---MAEQIDRITAERIQVELDKLMLGAHPIDGIDVMC 251
>gi|376243936|ref|YP_005134788.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae CDCE 8392]
gi|376252417|ref|YP_005139298.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae HC03]
gi|376288876|ref|YP_005161442.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae BH8]
gi|371586210|gb|AEX49875.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae BH8]
gi|372107178|gb|AEX73240.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae CDCE 8392]
gi|372113921|gb|AEX79980.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae HC03]
Length = 495
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 104/230 (45%), Gaps = 23/230 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LL + +D+D D A + EY +T FG + + D
Sbjct: 57 LYLVGGSVRDALLDELGHDLDFTTDARPDVVSAI-LEEYAPVVWDTGIE-FGTVSAEKDG 114
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNI- 213
+ I+ R + Y SR P ++FG T E D RRD T+N++ I
Sbjct: 115 QQ-------------IEITTFRSDVYDGQSRNPEVQFGDTLEGDLIRRDFTVNAMAMEIL 161
Query: 214 --NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
+ D G G+ DL G + TP P+ +F DDPLR+LRA RF ++ F L ++
Sbjct: 162 PDGSMQFHDPVG-GMDDLAAGLLDTPAVPQQSFNDDPLRMLRAARFVSQLGFDLAPRVRH 220
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
A A +I+ ERV E+D M+ G P + + L I++
Sbjct: 221 AMTE---MADQITRITAERVQVELDKMICGKAPWDGIDVMVDTGLADIIY 267
>gi|375294176|ref|YP_005128716.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae INCA 402]
gi|371583848|gb|AEX47514.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae INCA 402]
Length = 495
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 104/230 (45%), Gaps = 23/230 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LL + +D+D D A + EY +T FG + + D
Sbjct: 57 LYLVGGSVRDALLDELGHDLDFTTDARPDVVSAI-LEEYAPVVWDTGIE-FGTVSAEKDG 114
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNI- 213
+ I+ R + Y SR P ++FG T E D RRD T+N++ I
Sbjct: 115 QQ-------------IEITTFRSDVYDGQSRNPEVQFGDTLEGDLIRRDFTVNAMAMEIL 161
Query: 214 --NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
+ D G G+ DL G + TP P+ +F DDPLR+LRA RF ++ F L ++
Sbjct: 162 PDGSMQFHDPVG-GMDDLAAGLLDTPAVPQQSFNDDPLRMLRAARFVSQLGFDLAPRVRH 220
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
A A +I+ ERV E+D M+ G P + + L I++
Sbjct: 221 AMTE---MADQITRITAERVQVELDKMICGKAPWDGIDVMVDTGLADIIY 267
>gi|154508262|ref|ZP_02043904.1| hypothetical protein ACTODO_00758 [Actinomyces odontolyticus ATCC
17982]
gi|293191173|ref|ZP_06609106.1| tRNA adenylyltransferase [Actinomyces odontolyticus F0309]
gi|153797896|gb|EDN80316.1| tRNA adenylyltransferase [Actinomyces odontolyticus ATCC 17982]
gi|292820594|gb|EFF79563.1| tRNA adenylyltransferase [Actinomyces odontolyticus F0309]
Length = 509
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LG +D D M S + E L+ G + D
Sbjct: 29 LALVGGPVRDAFLGVTPHDFD-----MTTSARPERTEELLAQWGN----------ATWDI 73
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
K T + DL ++ R ++Y SR P + FG T E D RRD T+N++ +
Sbjct: 74 GKEFGTIGGRRGDLVVEVTTYRTDEYEIGSRKPEVTFGDTLEGDLTRRDFTVNAMAMRLP 133
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
++ D G G+ADL G + TP+ + +F DDPLR++RA RF A+ +D ++ A
Sbjct: 134 QMALVDPCG-GLADLADGNLRTPVSAEQSFDDDPLRIMRAARFSAQLGLDVDMDVMNAM- 191
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
E A+ +S ER+ E++ ++ P + +
Sbjct: 192 --ETMASRLEIVSAERIRAELERLIISPYPRRGI 223
>gi|41410430|ref|NP_963266.1| PcnA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|417748673|ref|ZP_12397108.1| tRNA adenylyltransferase [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440777748|ref|ZP_20956540.1| PcnA [Mycobacterium avium subsp. paratuberculosis S5]
gi|41399264|gb|AAS06882.1| PcnA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336459797|gb|EGO38711.1| tRNA adenylyltransferase [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436721985|gb|ELP46026.1| PcnA [Mycobacterium avium subsp. paratuberculosis S5]
Length = 480
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LLG+ D+D D + + A+ L TG FG
Sbjct: 39 LYLVGGSVRDALLGRLSPDLDFTTDARPEQVQQILRRWADNLWDTGIE----FG------ 88
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
T + D ++ R + Y + SR P +RFG E+D RRD T N++
Sbjct: 89 -------TVGVGKGDRRLEITTFRADTYDQVSRNPQVRFGNRLEDDLVRRDFTANAMAVR 141
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I + G+A L+ + TP P+ +F DDPLR+LRA RF ++ F + ++
Sbjct: 142 ITPDGPGEFLDPLGGLAALRQRVLDTPATPEESFGDDPLRMLRAARFVSQLGFTVAPRVR 201
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+A E A A+IS ERV E+D +V G+ PV +
Sbjct: 202 EAI---ERMAPQLARISAERVAAELDKLVLGDDPVAGI 236
>gi|297563764|ref|YP_003682738.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296848212|gb|ADH70232.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 499
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 114/241 (47%), Gaps = 30/241 (12%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGE---TAPSGFGVIPSN 152
L + GG VRD LLG+ D+D+ D + ++ E + + T FG
Sbjct: 60 LALVGGPVRDALLGRPANDVDLTTDAV-----PQRILELVDGWADSVWTVGIDFG----- 109
Query: 153 PDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGT-AEEDAYRRDLTINSLFY 211
T ++ L ++ R E YS SR P + +GT +D RRD T+N++
Sbjct: 110 --------TVGLRKKGLQLEVTTYRSESYSPKSRKPEVAYGTDIHDDLLRRDFTVNAMAV 161
Query: 212 NINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
+ D G G+ADL+ + TP P+ +F DDPLR++RA+RF A+ F L E+ +
Sbjct: 162 RLPGLEFVDPFG-GLADLRAKVLRTPGRPEDSFSDDPLRIMRAVRFAAQLGFTLAPEVAE 220
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF----KLPLQV 327
AA + ++ +S ERV E+ ++ P + + + L + V KL L++
Sbjct: 221 AARDMADRLSI---VSAERVRDELTKLMLSPDPHRGIELMVDLGIARYVLPEIPKLRLEI 277
Query: 328 E 328
+
Sbjct: 278 D 278
>gi|375291961|ref|YP_005126501.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae 241]
gi|376246797|ref|YP_005137036.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae HC01]
gi|371581632|gb|AEX45299.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae 241]
gi|372109427|gb|AEX75488.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae HC01]
Length = 495
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 104/230 (45%), Gaps = 23/230 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LL + +D+D D A + EY +T FG + + D
Sbjct: 57 LYLVGGSVRDALLDELGHDLDFTTDARPDVVSAI-LEEYAPVVWDTGIE-FGTVSAEKDG 114
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNI- 213
+ I+ R + Y SR P ++FG T E D RRD T+N++ I
Sbjct: 115 QQ-------------IEITTFRSDVYDGQSRNPEVQFGDTLEGDLIRRDFTVNAMAMEIL 161
Query: 214 --NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
+ D G G+ DL G + TP P+ +F DDPLR+LRA RF ++ F L ++
Sbjct: 162 PDGSMQFHDPVG-GMDDLAAGLLDTPAVPQQSFNDDPLRMLRAARFVSQLGFDLAPRVRH 220
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
A A +I+ ERV E+D M+ G P + + L I++
Sbjct: 221 AMTE---MADQITRITAERVQVELDKMICGKAPWDGIDVMVDTGLADIIY 267
>gi|359150811|ref|ZP_09183614.1| RNA nucleotidyltransferase [Streptomyces sp. S4]
gi|421740537|ref|ZP_16178787.1| tRNA adenylyltransferase [Streptomyces sp. SM8]
gi|406691062|gb|EKC94833.1| tRNA adenylyltransferase [Streptomyces sp. SM8]
Length = 488
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 18/218 (8%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + V + A E + FG +
Sbjct: 44 LALVGGSVRDALLGRLGNDLDFTTD-ARPEQVLRLVRPWADAVWEVGIA-FGTVGCQKRA 101
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
E T + I+ R E Y SR P + +G + E+D RRD T+N++ +
Sbjct: 102 VVEGEEVTFE-----IEITTYRSEAYDRTSRKPEVSYGDSIEDDLVRRDFTVNAMAVALP 156
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ D G G+ DL + TP P+A+F DDPLR++RA RF A+ DF + E+ A
Sbjct: 157 QKTFIDPYG-GLEDLSAQVLRTPGTPEASFSDDPLRMMRAARFAAQLDFDVAPEVVAAM- 214
Query: 275 SDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAMT 309
A+A +I S ERV E++ ++ P K +T
Sbjct: 215 -----TAMAERITIVSAERVRDELNKLLLSTHPRKGLT 247
>gi|329944766|ref|ZP_08292845.1| tRNA adenylyltransferase [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328529902|gb|EGF56792.1| tRNA adenylyltransferase [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 503
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LG +D+D+ S + E L A GET D +
Sbjct: 63 GGPVRDAFLGVAPHDLDLTT-----SARPEQTEEILKAWGET----------TWDVGRAF 107
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTSSV 218
T + ++ R EDY SR P + +G T D RRD T+N++ + +
Sbjct: 108 GTIGARKGSTIVEVTTYRTEDYEVGSRKPQVTYGDTLTGDLTRRDFTVNAMALRLPDLEL 167
Query: 219 EDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEV 278
D G G++DL G + TP+ + +F DDPLR++RA RF A+ F D E+ AA +E+
Sbjct: 168 VDPCG-GLSDLASGVLRTPVSAEQSFDDDPLRIMRAARFSAQLGF--DVEMDVMAAMEEM 224
Query: 279 KAALAAKISRERVGTEIDLMVSGNQPVKAM 308
L +S ERV E++ ++ G P + +
Sbjct: 225 APRLEI-VSAERVRAELERLLIGRWPRRGL 253
>gi|326778131|ref|ZP_08237396.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Streptomyces griseus XylebKG-1]
gi|326658464|gb|EGE43310.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Streptomyces griseus XylebKG-1]
Length = 487
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D E K+ + + FG + S D
Sbjct: 51 LALVGGSVRDALLGRLGNDLDFTTDAR--PEDVLKIVRPWADSVWEVGIAFGTVGSQKDG 108
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R E Y SR P + +G + E+D RRD T+N++ +
Sbjct: 109 YQ-------------IEVTTYRSEAYDRTSRKPEVSYGDSIEDDLVRRDFTVNAMAVALP 155
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+A+F DDPLR+LRA RF A+ DF + E+ A
Sbjct: 156 EKEFVDPYG-GLKDLADRVLRTPGTPEASFSDDPLRMLRAARFAAQLDFEVAPEVVTAMT 214
Query: 275 SDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAM 308
+AA+I S ERV E++ ++ P K +
Sbjct: 215 E------MAARIDIVSAERVRDELNKLLLSQHPRKGL 245
>gi|254777641|ref|ZP_05219157.1| PcnA [Mycobacterium avium subsp. avium ATCC 25291]
Length = 480
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LLG+ D+D D + + A+ L TG FG
Sbjct: 39 LYLVGGSVRDALLGRLSPDLDFTTDARPEQVQQILRRWADNLWDTGIE----FG------ 88
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
T + D ++ R + Y + SR P +RFG E+D RRD T N++
Sbjct: 89 -------TVGVGKGDRRLEITTFRADTYDQVSRNPQVRFGNRLEDDLVRRDFTANAMAVR 141
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I + G+A L+ + TP P+ +F DDPLR+LRA RF ++ F + ++
Sbjct: 142 ITPDGPGEFLDPLGGLAALRQRVLDTPATPEESFGDDPLRMLRAARFVSQLGFTVAPRVR 201
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+A E A A+IS ERV E+D +V G+ PV +
Sbjct: 202 EAI---ERMAPQLARISAERVAAELDKLVLGDDPVAGI 236
>gi|410459349|ref|ZP_11313100.1| tRNA CCA-pyrophosphorylase [Bacillus azotoformans LMG 9581]
gi|409930325|gb|EKN67326.1| tRNA CCA-pyrophosphorylase [Bacillus azotoformans LMG 9581]
Length = 405
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 28/206 (13%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSAT-GETAPSGFGVIPSNPDQSKH 158
GG VRD LLG+ DIDIA + + E + A T P G KH
Sbjct: 26 GGSVRDHLLGRSRGDIDIA---------TSALPEDVQALFDRTIPVGI----------KH 66
Query: 159 LETATMKLYDLWIDFVNLRCE-DYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNINTS 216
+ +++ + R + DY + R + F T+ EED RRD TIN++ +I+ +
Sbjct: 67 GTVVVLHNQEMY-EVTTFRIDGDYQDFRRPSKVEFVTSLEEDLSRRDFTINAIAMDIHGT 125
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
++ G+ DLK+ I T P FL+DPLR++RAIRF ++ DF L E KK+
Sbjct: 126 IIDPFEGQ--KDLKNKLIQTVGNPDDRFLEDPLRIMRAIRFVSQLDFELSPETKKSIKR- 182
Query: 277 EVKAALAAKISRERVGTEIDLMVSGN 302
A L KIS ERV E + +++G
Sbjct: 183 --HAHLLTKISVERVLVEFEKLLTGQ 206
>gi|289548683|ref|YP_003473671.1| polynucleotide adenylyltransferase region [Thermocrinis albus DSM
14484]
gi|289182300|gb|ADC89544.1| Polynucleotide adenylyltransferase region [Thermocrinis albus DSM
14484]
Length = 822
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 25/180 (13%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLGK +DID ++ + A ++A+Y + P FG
Sbjct: 454 LVGGVVRDLLLGKRVWDIDFVVEGD-AIKLAQRLAQYYNVNLHPFPQ-FG---------- 501
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNI---N 214
T +K+ D+ ++ R E Y P + + +ED RRD TIN++ ++ +
Sbjct: 502 ---TVHLKIKDIKVELATTRRETYPHPGAYPVVEPASLKEDLLRRDFTINAMAVSVMEED 558
Query: 215 TSSVEDLTGRGIADLKHG--KIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
++ D G G+ DLK G +I+ P+ +F++DP+R+LRA+RF RF F L + +KA
Sbjct: 559 FGTLIDYFG-GLRDLKEGLIRILHPM----SFVEDPVRILRALRFAGRFGFKLSKSTEKA 613
>gi|50843738|ref|YP_056965.1| RNA nucleotidyltransferase [Propionibacterium acnes KPA171202]
gi|50841340|gb|AAT84007.1| putative RNA nucleotidyltransferase [Propionibacterium acnes
KPA171202]
Length = 507
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + ++ AT + FG I + D
Sbjct: 67 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRQHTHATWDIG-RAFGTIGAQID- 123
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T ++D RRD T+N++ +
Sbjct: 124 ------------DWVVEATTYRADAYHPDSRKPEIVYGETLKDDLIRRDFTVNAMALHAA 171
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+ D+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 172 TRTFSDPYA-GLTDIVSGILRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 229
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 230 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 261
>gi|381399844|ref|ZP_09924861.1| tRNA adenylyltransferase [Microbacterium laevaniformans OR221]
gi|380772807|gb|EIC06494.1| tRNA adenylyltransferase [Microbacterium laevaniformans OR221]
Length = 479
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 23/218 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVI----PS 151
L + GG VRD LLG+ +D+D+ N + V +AT + FG I P
Sbjct: 34 LAIVGGPVRDALLGRPTHDLDLTT-NARPDDILRIVKPLATATWDIG-RAFGTIGAKMPG 91
Query: 152 NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLF 210
S+ +E T R + Y +R PT+ FG E+D RRD T+ ++
Sbjct: 92 PAGTSEQVEITTY------------RADSYDGLTRKPTVAFGDRLEDDLARRDFTVGAMA 139
Query: 211 YNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
+ ++ D TG G+ DL G + TP P +F DDPLR+LRA RF ++ +F D
Sbjct: 140 LRLPVPALVDPTG-GVEDLIAGVLRTPGDPDVSFGDDPLRMLRAARFASQLEF--DVAPA 196
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A + ++A +A +S ERV E+ +++ + PV+ +
Sbjct: 197 TLEAMERLRATIAI-VSPERVQAELVKLLATDDPVRGI 233
>gi|357390813|ref|YP_004905654.1| putative tRNA nucleotidyltransferase [Kitasatospora setae KM-6054]
gi|311897290|dbj|BAJ29698.1| putative tRNA nucleotidyltransferase [Kitasatospora setae KM-6054]
Length = 481
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 28/220 (12%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + V + A + + FG + + D
Sbjct: 38 LSLVGGSVRDALLGRLGNDLDFTTD-ARPQQILKLVKGWADAVWDVGIA-FGTVGARKDT 95
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R E Y +SR P + +G + E+D RRD T+N++ ++
Sbjct: 96 PE---------GSFLIEITTYRSEAYDRSSRKPEVSYGDSIEQDLVRRDFTVNAMAVDLP 146
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D RG+ DL+ + TP P+ +F DDPLR++RA RF A+ DF
Sbjct: 147 GRGFVD-PHRGLDDLEARVLRTPATPEESFSDDPLRMMRAARFAAQLDF---------DP 196
Query: 275 SDEVKAALAAK------ISRERVGTEIDLMVSGNQPVKAM 308
+ EV AA+ A +S ERV E++ ++ PVK +
Sbjct: 197 APEVVAAMTAMADRIGIVSAERVQAELNKLLLAEHPVKGL 236
>gi|29840677|ref|NP_829783.1| poly(A) polymerase [Chlamydophila caviae GPIC]
gi|29835027|gb|AAP05661.1| poly(A) polymerase family protein [Chlamydophila caviae GPIC]
Length = 410
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 111/234 (47%), Gaps = 24/234 (10%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD L+GK DIDIA N +T + LS + FG+I + ++
Sbjct: 27 GGCVRDMLMGKPIEDIDIA-TNAPPVIVSTIFTDTLSLG-----AAFGIIVVK-ENNRLF 79
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINTSSV 218
E AT R ++ E+ R P + F + +EDA RRD TIN ++Y+ +
Sbjct: 80 EVAT------------FRSDENYEDGRHPERVVFSSMKEDALRRDFTINGMYYDPFEEKL 127
Query: 219 EDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEV 278
DL G DL+ + PK F +D LR+LRA+RF + F LD ++A +
Sbjct: 128 FDLV-EGRRDLEKRVVRAIGHPKLRFSEDKLRILRAVRFSSSLGFSLDPATERAIIKE-- 184
Query: 279 KAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVL 332
L +S ER+ E+ M+ N P +A++ + L + ++F V P +L
Sbjct: 185 APTLVNSVSPERIWQELRKMLKKN-PYEALSLLIKLKIITVIFPELRDVPPSLL 237
>gi|411003728|ref|ZP_11380057.1| RNA nucleotidyltransferase [Streptomyces globisporus C-1027]
Length = 466
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D E K+ + + FG + S D
Sbjct: 30 LALVGGSVRDALLGRLGNDLDFTTDAR--PEDVLKIVRPWADSVWEVGIAFGTVGSQKDG 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R E Y SR P + +G + E+D RRD T+N++ +
Sbjct: 88 YQ-------------IEVTTYRSEAYDRTSRKPEVSYGDSIEDDLVRRDFTVNAMAVALP 134
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+A+F DDPLR+LRA RF A+ DF + E+ A
Sbjct: 135 EKEFVDPYG-GLKDLADRVLRTPGTPEASFSDDPLRMLRAARFAAQLDFEVAPEVVTAMT 193
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
AA +S ERV E++ ++ P K +
Sbjct: 194 D---MAARIDIVSAERVRDELNKLLLSQHPRKGL 224
>gi|38234901|ref|NP_940668.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae NCTC
13129]
gi|38201166|emb|CAE50890.1| Putative tRNA nucleotidyltransferase [Corynebacterium diphtheriae]
Length = 495
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV-AEYLSATGETAPSGFGVIPSNPD 154
L + GG VRD LL + +D+D D E + + EY +T FG + + D
Sbjct: 57 LYLVGGSVRDALLDELGHDLDCTTDAR--PEVVSAILEEYAPVVWDTGIE-FGTVSAEKD 113
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNI 213
+ I+ R + Y SR P ++FG T E D RRD T+N++ I
Sbjct: 114 GQQ-------------IEITTFRSDVYDGQSRNPEVQFGDTLEGDLIRRDFTVNAMAMEI 160
Query: 214 ---NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
+ D G G+ DL G + TP P+ +F DDPLR+LRA RF ++ F L ++
Sbjct: 161 LPDGSMQFHDPVG-GMNDLVAGLLDTPATPQQSFNDDPLRMLRAARFVSQLGFDLAPRVR 219
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
A A +I+ ERV E+D M+ G P + + L I++
Sbjct: 220 HAMTE---MADQITRITAERVQVELDKMICGKVPWDGIDVMVDTGLADIIY 267
>gi|383806719|ref|ZP_09962280.1| CCA tRNA nucleotidyltransferase [Candidatus Aquiluna sp. IMCC13023]
gi|383299149|gb|EIC91763.1| CCA tRNA nucleotidyltransferase [Candidatus Aquiluna sp. IMCC13023]
Length = 517
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 117/247 (47%), Gaps = 24/247 (9%)
Query: 65 QVRDKIE-LTD-TETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNM 122
QV D ++ LTD T+ +F+ L E L + GG VRD ++G+ D+D A
Sbjct: 48 QVADALKNLTDNTDNPLFTVLGEAFAAAGEE--LALVGGPVRDAIMGRRSIDLDFAT--- 102
Query: 123 MGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYS 182
+ + LS G A + + D + T ++ D ++ + R + Y
Sbjct: 103 -----SANPDKILSIVGPLASATW-------DIGRAFGTIAAQIGDEKVEITSYRADSYE 150
Query: 183 ENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPK 241
+SR PT+ FG E+D RRD T+NS+ + + D +G+ DL + TP P+
Sbjct: 151 VDSRKPTIEFGDNLEDDLKRRDFTVNSMALRLPSRIFVD-PHQGLRDLLLETLRTPSAPE 209
Query: 242 ATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSG 301
+F DDPLR++R RF ++ F LD E A + + IS+ERV E+ ++
Sbjct: 210 VSFSDDPLRMMRGARFASQLGFELDPEAFTAMCGMAERIEI---ISKERVRDELSKLLLS 266
Query: 302 NQPVKAM 308
+ P+ +
Sbjct: 267 DNPIPGL 273
>gi|182437476|ref|YP_001825195.1| RNA nucleotidyltransferase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178465992|dbj|BAG20512.1| putative RNA nucleotidyltransferase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 480
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + V + A E + FG + S D
Sbjct: 44 LALVGGSVRDALLGRLGNDLDFTTD-ARPEDVLKIVRPWADAVWEVGIA-FGTVGSQKDG 101
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R E Y SR P + +G + E+D RRD T+N++ +
Sbjct: 102 YQ-------------IEVTTYRSEAYDRTSRKPEVSYGDSIEDDLVRRDFTVNAMAVALP 148
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+A+F DDPLR+LRA RF A+ DF + E+ A
Sbjct: 149 EKEFVDPYG-GLKDLADRVLRTPGTPEASFSDDPLRMLRAARFAAQLDFEVAPEVVTAMT 207
Query: 275 SDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAM 308
+AA+I S ERV E++ ++ P K +
Sbjct: 208 E------MAARIDIVSAERVRDELNKLLLSQHPRKGL 238
>gi|227487679|ref|ZP_03917995.1| possible tRNA adenylyltransferase [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227092373|gb|EEI27685.1| possible tRNA adenylyltransferase [Corynebacterium glucuronolyticum
ATCC 51867]
Length = 477
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 26/256 (10%)
Query: 57 EPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDID 116
+P P + + IEL + +I + L E L + GG VRD LLG+ D+D
Sbjct: 2 KPMLPTSGNISEVIEL-EPYKEILTSLAGEFNRHGEE--LYLVGGSVRDSLLGRLAGDLD 58
Query: 117 IALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNL 176
+ ++E+ A +T +G I + D + ++
Sbjct: 59 FTTSALPDVTHDI-LSEWADAVWDTGIE-YGTISAAKDGQQ-------------VEITTF 103
Query: 177 RCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTSSVE---DLTGRGIADLKHG 232
R + Y SR P ++FG T E D RRD TIN++ ++ + D G G+ L++
Sbjct: 104 RADTYDGTSRNPVVKFGDTLEGDLVRRDFTINAMAIALSPTGDHTFCDPLG-GLTALQNR 162
Query: 233 KIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVG 292
I TP P+ +F DDPLR+LRA RF A+ +F + + A + AA +I+RER+
Sbjct: 163 IIDTPDAPEISFGDDPLRMLRAARFAAQLEFDVATRVVDAMTT---MAAEIDRITRERIQ 219
Query: 293 TEIDLMVSGNQPVKAM 308
E+D ++ G P + +
Sbjct: 220 AEMDKLICGAAPWRGI 235
>gi|291452663|ref|ZP_06592053.1| RNA nucleotidyltransferase [Streptomyces albus J1074]
gi|291355612|gb|EFE82514.1| RNA nucleotidyltransferase [Streptomyces albus J1074]
Length = 488
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 18/218 (8%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + V + A E + FG +
Sbjct: 44 LALVGGSVRDALLGRLGNDLDFTTD-ARPEQVLRLVRPWADAVWEVGIA-FGTVGCQKRA 101
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
E T + I+ R E Y SR P + +G + E+D RRD T+N++ +
Sbjct: 102 VVEGEEVTFE-----IEITTYRSEAYDRASRKPEVSYGDSIEDDLVRRDFTVNAMAVALP 156
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ D G G+ DL + TP P+A+F DDPLR++RA RF A+ DF + E+ A
Sbjct: 157 QKTFIDPYG-GLEDLSAQVLRTPGTPEASFSDDPLRMMRAARFAAQLDFDVAPEVVAAM- 214
Query: 275 SDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAMT 309
A+A +I S ERV E++ ++ P K +T
Sbjct: 215 -----TAMAERITIVSAERVRDELNKLLLSTHPRKGLT 247
>gi|433654935|ref|YP_007298643.1| tRNA nucleotidyltransferase/poly(A) polymerase
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433293124|gb|AGB18946.1| tRNA nucleotidyltransferase/poly(A) polymerase
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 388
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 30/220 (13%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG++RDK+L + DIDI ++ G +A + ++L+ E
Sbjct: 16 IVGGYIRDKILNLESNDIDITVEGD-GIRYALMLNKFLNGKIEIHEK------------- 61
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+TA ++ D V+ R E Y+ + +P + ED RRD TIN L ++I
Sbjct: 62 -FKTAKIQADKYTFDVVSARKEYYTHSGILPDVELADIVEDIKRRDFTINMLAFDIKEGM 120
Query: 218 VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE----LKKAA 273
+ DL G+ D+K+ KI+ + K +F DDP R+ RA+R+ R DF L+ LK++
Sbjct: 121 IIDLCN-GLDDIKN-KIIRVVHDK-SFNDDPTRIFRALRYSVRLDFKLEPHTELLLKQSI 177
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQP---VKAMTH 310
A+ ++ +S +R+ EI L+ S P VK M H
Sbjct: 178 ANGDI-----DNLSTDRIMNEIYLIFSEKNPETIVKLMKH 212
>gi|254384792|ref|ZP_05000129.1| RNA nucleotidyltransferase [Streptomyces sp. Mg1]
gi|194343674|gb|EDX24640.1| RNA nucleotidyltransferase [Streptomyces sp. Mg1]
Length = 480
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D E K+ + + FG + ++
Sbjct: 44 LALVGGSVRDALLGRLGNDLDFTTDAH--PEDVLKIVRPWADSVWDVGIAFGTVGAH--- 98
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
KL I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 99 ---------KL-GFQIEVTTYRSESYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMAVALP 148
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA-- 272
D G G+ DL+ G + TP P+ +F DDPLR+LRA RF A+ DF + E+ A
Sbjct: 149 EKEFVDPHG-GLEDLQAGILRTPGTPEDSFSDDPLRMLRAARFAAQLDFEVAPEVVAAMT 207
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A +D ++ +S ERV E++ ++ P K +
Sbjct: 208 AMADRIEI-----VSAERVQGELNKLLLSPNPRKGL 238
>gi|395206141|ref|ZP_10396707.1| tRNA adenylyltransferase [Propionibacterium humerusii P08]
gi|422440973|ref|ZP_16517786.1| tRNA adenylyltransferase [Propionibacterium acnes HL037PA3]
gi|422473434|ref|ZP_16549915.1| tRNA adenylyltransferase [Propionibacterium acnes HL037PA2]
gi|422572674|ref|ZP_16648241.1| tRNA adenylyltransferase [Propionibacterium acnes HL044PA1]
gi|313835239|gb|EFS72953.1| tRNA adenylyltransferase [Propionibacterium acnes HL037PA2]
gi|314929206|gb|EFS93037.1| tRNA adenylyltransferase [Propionibacterium acnes HL044PA1]
gi|314970839|gb|EFT14937.1| tRNA adenylyltransferase [Propionibacterium acnes HL037PA3]
gi|328905733|gb|EGG25509.1| tRNA adenylyltransferase [Propionibacterium humerusii P08]
Length = 499
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + + AT + FG I +
Sbjct: 59 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRQRTHATWDIG-RAFGTIGA---- 112
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
++ D ++ R + Y +SR P + +G T E+D RRD T+N++ +
Sbjct: 113 ---------QINDWVVEVTTYRADAYHPDSRKPEIVYGETLEDDLIRRDFTVNAMALHAA 163
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G+AD+ G + TP PP+ +F DDPLR++RA RF ++ F + ++ +AA
Sbjct: 164 TRTFSDPYA-GLADIVAGVLRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTGDV-RAAM 221
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D A+ IS ERV E+ + + P + +
Sbjct: 222 TD--MASRIEIISAERVRDELSKTLLTDHPREGL 253
>gi|239989147|ref|ZP_04709811.1| putative RNA nucleotidyltransferase [Streptomyces roseosporus NRRL
11379]
gi|291446152|ref|ZP_06585542.1| RNA nucleotidyltransferase [Streptomyces roseosporus NRRL 15998]
gi|291349099|gb|EFE76003.1| RNA nucleotidyltransferase [Streptomyces roseosporus NRRL 15998]
Length = 480
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D E K+ + + FG + S D
Sbjct: 44 LALVGGSVRDALLGRLGNDLDFTTDAR--PEDVLKIVRPWADSVWEVGIAFGTVGSQKDG 101
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R E Y SR P + +G + E+D RRD T+N++ +
Sbjct: 102 YQ-------------IEVTTYRSEAYDRTSRKPEVSYGDSIEDDLVRRDFTVNAMAVALP 148
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+A+F DDPLR+LRA RF A+ DF + E+ A
Sbjct: 149 EKEFVDPYG-GLKDLADRVLRTPGTPEASFSDDPLRMLRAARFAAQLDFEVAPEVITAMT 207
Query: 275 SDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAM 308
+AA+I S ERV E++ ++ P K +
Sbjct: 208 E------MAARIDIVSAERVRDELNKLLLSQHPRKGL 238
>gi|399523515|ref|ZP_10764146.1| CCA tRNA nucleotidyltransferase [Atopobium sp. ICM58]
gi|398375506|gb|EJN52866.1| CCA tRNA nucleotidyltransferase [Atopobium sp. ICM58]
Length = 534
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LG +D D M S + E L+ G + D
Sbjct: 55 LALVGGPVRDAFLGVTPHDFD-----MTTSARPERTEELLAQWGN----------ATWDI 99
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
K T + DL ++ R ++Y SR P + FG T E D RRD T+N++ +
Sbjct: 100 GKEFGTIGGRRGDLIVEVTTYRTDEYEIGSRKPEVTFGDTLEGDLTRRDFTVNAMAMRLP 159
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
++ D G G+ADL G + TP+ + +F DDPLR++RA RF A+ +D ++ A
Sbjct: 160 QMALVDPCG-GLADLADGNLRTPVSAEQSFDDDPLRIMRAARFSAQLGLDVDLDVMNAM- 217
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
E A+ +S ER+ E++ ++ P + +
Sbjct: 218 --ETMASRLDIVSAERIRAELERLIISPYPRRGI 249
>gi|376255436|ref|YP_005143895.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae PW8]
gi|376291531|ref|YP_005163778.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae C7 (beta)]
gi|372104927|gb|AEX68524.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae C7 (beta)]
gi|372118520|gb|AEX70990.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae PW8]
Length = 495
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV-AEYLSATGETAPSGFGVIPSNPD 154
L + GG VRD LL + +D+D D E + + EY +T FG + + +
Sbjct: 57 LYLVGGSVRDALLDELGHDLDFTTDAR--PEVVSAILEEYAPVVWDTGIE-FGTVSAEKE 113
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNI 213
+ I+ R + Y SR P ++FG T E D RRD T+N++ I
Sbjct: 114 GQQ-------------IEITTFRSDIYDGQSRNPEVQFGDTLEGDLIRRDFTVNAMAMEI 160
Query: 214 ---NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
+ D G G+ DL G + TP P+ +F DDPLR+LRA RF ++ F L ++
Sbjct: 161 LPDGSMQFHDPVG-GMDDLAAGLLDTPAAPQQSFNDDPLRMLRAARFVSQLGFDLAPRVR 219
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
A A +I+ ERV E+D M+ G P + + L I++
Sbjct: 220 HAMTE---MADQITRITAERVQVELDKMICGKAPWDGVDVMVDTGLADIIY 267
>gi|357400720|ref|YP_004912645.1| RNA nucleotidyltransferase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|386356776|ref|YP_006055022.1| RNA nucleotidyltransferase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337767129|emb|CCB75840.1| putative RNA nucleotidyltransferase [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|365807284|gb|AEW95500.1| RNA nucleotidyltransferase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 482
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D E K+ + FG +
Sbjct: 41 LALVGGSVRDALLGRLGNDLDFTTDAR--PEQVLKILRGWADAVWEVGIAFGTVGCR--- 95
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
A D I+ R E Y +SR P + +G T EED RRD T+N++ ++
Sbjct: 96 -----KADAAGNDFQIEVTTYRSEAYDRDSRKPEVSYGDTIEEDLVRRDFTVNAMAVSLP 150
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G+ DL + TP P+ +F DDPLR++RA RF A+ DF + E+ AA
Sbjct: 151 GIEFVD-PHNGLEDLARRVLRTPGTPQESFSDDPLRMMRAARFAAQLDFDVAPEV--VAA 207
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
E+ ++ +S ERV E++ +V G P K +
Sbjct: 208 MTEMADRISI-VSAERVRDELNKLVCGAYPRKGL 240
>gi|423349619|ref|ZP_17327275.1| tRNA adenylyltransferase [Scardovia wiggsiae F0424]
gi|393702735|gb|EJD64938.1| tRNA adenylyltransferase [Scardovia wiggsiae F0424]
Length = 502
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 106/218 (48%), Gaps = 23/218 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ +D+D + EF + ++ + FG + +
Sbjct: 55 LALVGGSVRDILLGRPAHDLDFCT-SAKPEEFEPLLRQWGDGFWDMG-RKFGTLGA---- 108
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
KH++ D+ I+ R + Y SR P + +GT+ E D RRD T+NS+ +
Sbjct: 109 LKHMQDGA----DVSIEVTTYRSDVYEPESRKPDVNYGTSLEGDLSRRDFTVNSMAVRVP 164
Query: 215 TSSVED-LTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
ED GR DL+ + TP P+ +F DDPLR++RA+RF A+ DF + A
Sbjct: 165 QMEFEDPFNGRD--DLERRLLRTPAEPEQSFSDDPLRMMRAVRFVAQLDFRI------AL 216
Query: 274 ASDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAM 308
+ E A+A +I S ERV E+ +V P K +
Sbjct: 217 DTAEALNAMAGRIEIVSAERVRDELVKLVLSRHPRKGL 254
>gi|149179457|ref|ZP_01858009.1| metal dependent phosphohydrolase [Planctomyces maris DSM 8797]
gi|148841703|gb|EDL56114.1| metal dependent phosphohydrolase [Planctomyces maris DSM 8797]
Length = 422
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 97/205 (47%), Gaps = 26/205 (12%)
Query: 99 AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS-ATGETAPSGFGVIPSNPDQSK 157
AGG VRD LL K+ D D+A N + E T + + A G + FGVI Q
Sbjct: 27 AGGCVRDLLLQKEPKDYDVAT-NALPEEVRTLFGKRRTLAVG----ASFGVIIVRGHQP- 80
Query: 158 HLETATMKLYDLWIDFVNLRCED-YSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
D ++ R E Y + R ++F TAEEDA RRD TIN +FY+
Sbjct: 81 ----------DCDVEIATFRSEGPYLDGRRPEHVKFTTAEEDAQRRDFTINGMFYDPIND 130
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA-- 274
S+ D G G ADL I P +D LR+LRAIRF A F L+E ++A
Sbjct: 131 SLFDYVG-GKADLNQHIIRAIGNPLERMQEDKLRLLRAIRFAATLHFQLEESTRQAVQTM 189
Query: 275 SDEVKAALAAKISRERVGTEIDLMV 299
+D++ +S ER+ E+ M+
Sbjct: 190 ADQINV-----VSPERIADELRKML 209
>gi|357591178|ref|ZP_09129844.1| tRNA nucleotidyltransferase [Corynebacterium nuruki S6-4]
Length = 491
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ +D+D D + T + + +++T FG
Sbjct: 35 LYLVGGSVRDALLGRLSHDLDFTTDAR--PDAVTAILDDVASTVWDTGIAFG-------- 84
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T + L + ++ R + Y SR P + FG++ +ED RRD N++ ++
Sbjct: 85 -----TVSALLDGMTVEITTFRADQYDGESRNPEVTFGSSLDEDLVRRDFRCNAIALELD 139
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ L GI DL G + TP P+ +F DDPLR+LRA RF ++ F + + +A
Sbjct: 140 AAGDHRLRDPQNGIDDLVAGVLDTPAAPEQSFHDDPLRMLRACRFASQLGFTVAPRVLQA 199
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
A +I+ ER E+D ++ G+QP
Sbjct: 200 MTE---MADQITRITVERDAAELDKLMLGDQP 228
>gi|315605488|ref|ZP_07880525.1| polyA polymerase family protein [Actinomyces sp. oral taxon 180
str. F0310]
gi|315312755|gb|EFU60835.1| polyA polymerase family protein [Actinomyces sp. oral taxon 180
str. F0310]
Length = 533
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 29/240 (12%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAG-------GWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
T+ F+ L + L T+ R AG G VRD LG +D D+A S
Sbjct: 31 TRTFAALPPAI--MELGTIFRDAGEELALVGGPVRDAFLGVTPHDFDMAT-----SARPE 83
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
+ E LS G + D K T + D+ ++ R ++Y SR P
Sbjct: 84 RTEELLSRWGN----------ATWDIGKEFGTIGGRRGDVVVEVTTYRTDEYEIGSRKPE 133
Query: 190 MRFG-TAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
+ FG T E D RRD T+N++ + ++ D G+ DL G + TP+ + +F DDP
Sbjct: 134 VTFGDTLEGDLTRRDFTVNAMAMRLPQMALVDPCA-GLTDLAAGNLRTPVSAEQSFDDDP 192
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LR++RA RF A+ +DE++ A E A+ +S ER+ E++ ++ P + +
Sbjct: 193 LRIMRAARFSAQLGLDVDEDVMNAM---ETMASRLEIVSAERIRAELERLIISPYPRRGI 249
>gi|255311533|ref|ZP_05354103.1| polyA polymerase [Chlamydia trachomatis 6276]
gi|255317834|ref|ZP_05359080.1| polyA polymerase [Chlamydia trachomatis 6276s]
Length = 410
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 159/366 (43%), Gaps = 66/366 (18%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
+T + ++ ++ LR+ + GG VRD LLG+ ++DIA N + T
Sbjct: 1 MTQSTLEVAKKIVRKLRNAGYQAYF--VGGSVRDMLLGRPIEEVDIA-TNASPTIVTTIF 57
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
+ LS + FG+I + + E AT + EDY + +
Sbjct: 58 PDTLSIG-----AAFGIIAVK-ENGQLFEVATFR-----------SDEDYEDGRHPNRVV 100
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
F + ++DA RRD TIN ++Y+ + DL G ADL+ I P+ FL+D LR+
Sbjct: 101 FASMKDDAIRRDFTINGMYYDPFEEKLFDLV-EGRADLERKIIRAIGHPRQRFLEDKLRI 159
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
LRAIRF A F LD + ++A + +L +S ER+ E+ M+ P +++ +
Sbjct: 160 LRAIRFAATLGFALDPQTEQAIIKE--LPSLPNSVSPERIWQELKKMLR-TAPYESLQLL 216
Query: 312 CGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAAL 371
L + I+F PE+ ++ + +L +A Q I S + AL
Sbjct: 217 TKLKVLPILF-------PEL----KVSSSGFLRSAIAFAQKIHDSQIPE--------IAL 257
Query: 372 FLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIH----RVLEKFLSLIPSLV 427
LP FR+ K KA +A + + + ++LE + + +P +
Sbjct: 258 LLPL-------------------FREVDKEKALEAFSRLRVSNKELKLLEDWYAALPQFL 298
Query: 428 SAEDVK 433
S ++ K
Sbjct: 299 SKQNDK 304
>gi|338734132|ref|YP_004672605.1| CCA-adding protein [Simkania negevensis Z]
gi|336483515|emb|CCB90114.1| cCA-adding enzyme [Simkania negevensis Z]
Length = 406
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 99 AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSG--FGVIPSNPDQS 156
AGGWVRD L+ + DIDIA + V E +T P G FG++ ++
Sbjct: 24 AGGWVRDFLMHRASDDIDIATE--------ASVEEVQRIFPKTIPVGVNFGIVIVV-EEG 74
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
H E AT + + + Y + R + ++DA RRD TIN +FY+
Sbjct: 75 HHFEVATFR-----------KDQGYRDGRRPIAVESADDKQDAERRDFTINGMFYDPLKQ 123
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
V D G D++ G I P FL+D LR++RA+R+ +RF F ++ E KA
Sbjct: 124 EVIDYV-EGKKDIEKGIIRAIGNPHERFLEDRLRMIRAVRYASRFHFSIEAETLKAILDH 182
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
AL ++ ERV E M + A+ + L+L ++F
Sbjct: 183 --ADALFPAVAIERVWNEFCKMAAYPHFDMALITLHRLSLLPVIF 225
>gi|255349096|ref|ZP_05381103.1| polyA polymerase [Chlamydia trachomatis 70]
gi|255503633|ref|ZP_05382023.1| polyA polymerase [Chlamydia trachomatis 70s]
gi|255507312|ref|ZP_05382951.1| polyA polymerase [Chlamydia trachomatis D(s)2923]
gi|385242094|ref|YP_005809934.1| polyA polymerase [Chlamydia trachomatis E/11023]
gi|385245704|ref|YP_005814527.1| polyA polymerase [Chlamydia trachomatis E/150]
gi|386263060|ref|YP_005816339.1| polyA polymerase [Chlamydia trachomatis Sweden2]
gi|389858399|ref|YP_006360641.1| polyA polymerase [Chlamydia trachomatis F/SW4]
gi|389859275|ref|YP_006361516.1| polyA polymerase [Chlamydia trachomatis E/SW3]
gi|389860151|ref|YP_006362391.1| polyA polymerase [Chlamydia trachomatis F/SW5]
gi|289525748|emb|CBJ15229.1| polyA polymerase [Chlamydia trachomatis Sweden2]
gi|296435320|gb|ADH17498.1| polyA polymerase [Chlamydia trachomatis E/150]
gi|296439037|gb|ADH21190.1| polyA polymerase [Chlamydia trachomatis E/11023]
gi|380249471|emb|CCE14767.1| polyA polymerase [Chlamydia trachomatis F/SW5]
gi|380250346|emb|CCE13878.1| polyA polymerase [Chlamydia trachomatis F/SW4]
gi|380251224|emb|CCE12989.1| polyA polymerase [Chlamydia trachomatis E/SW3]
gi|440527416|emb|CCP52900.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis D/SotonD1]
gi|440530089|emb|CCP55573.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis E/SotonE4]
gi|440530989|emb|CCP56473.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis E/SotonE8]
gi|440531880|emb|CCP57390.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis F/SotonF3]
gi|440535456|emb|CCP60966.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis E/Bour]
Length = 410
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 25/254 (9%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
+T + ++ ++ LR+ + GG VRD LLG+ ++DIA N + T
Sbjct: 1 MTQSTLEVAKKIVRKLRNAGYQAYF--VGGSVRDMLLGRPIEEVDIA-TNASPTIVTTIF 57
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
+ LS + FG+I + + E AT + EDY + +
Sbjct: 58 PDTLSIG-----AAFGIIAVK-ENGQLFEVATFR-----------SDEDYEDGRHPNRVV 100
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
F + ++DA RRD TIN ++Y+ + DL G ADL+ I PK FL+D LR+
Sbjct: 101 FASMKDDAIRRDFTINGMYYDPFEEKLFDLV-EGRADLERKIIRAIGHPKQRFLEDKLRI 159
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV--SGNQPVKAMT 309
LRAIRF A F LD + ++A + +L +S ER+ E+ M+ + + ++ +T
Sbjct: 160 LRAIRFAATLGFALDPQTEQAIIKE--LPSLPNSVSPERIWQELKKMLRTAPYESLQLLT 217
Query: 310 HICGLTLFWIVFKL 323
+ GL + + K+
Sbjct: 218 KLKGLPILFPELKV 231
>gi|166154046|ref|YP_001654164.1| polyA polymerase [Chlamydia trachomatis 434/Bu]
gi|301335247|ref|ZP_07223491.1| polyA polymerase [Chlamydia trachomatis L2tet1]
gi|165930034|emb|CAP03517.1| polyA polymerase [Chlamydia trachomatis 434/Bu]
gi|440540796|emb|CCP66310.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis L2/25667R]
Length = 410
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 159/366 (43%), Gaps = 66/366 (18%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
+T + ++ ++ LR+ + GG VRD LLG+ ++DIA N + T
Sbjct: 1 MTQSTLEVAKKIVRKLRNAGYQAYF--VGGSVRDMLLGRPIEEVDIA-TNASPTIVTTIF 57
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
+ LS + FG+I + + E AT + EDY + +
Sbjct: 58 PDTLSIG-----AAFGIIAVK-ENGQLFEVATFR-----------SDEDYEDGRHPNRVV 100
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
F + ++DA RRD TIN ++Y+ + DL G ADL+ I PK FL+D LR+
Sbjct: 101 FASMKDDAIRRDFTINGMYYDPFEEKLFDLV-EGRADLERKIIRAIGHPKQRFLEDKLRI 159
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
LRAIRF A F LD + ++A + +L ++ ER+ E+ M+ P +++ +
Sbjct: 160 LRAIRFAATLGFALDPQTEQAIIKE--LPSLPNSVAPERIWQELKKMLR-TAPYESLQLL 216
Query: 312 CGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAAL 371
L + I+F PE+ ++ + +L +A Q I S + AL
Sbjct: 217 TKLKVLPILF-------PEL----KVSSSGFLRSAIAFAQKIHDSQIPE--------IAL 257
Query: 372 FLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIH----RVLEKFLSLIPSLV 427
LP FR+ K KA +A + + + ++LE + + +P +
Sbjct: 258 LLPL-------------------FREVDKEKALEAFSRLRVSNKELKLLEDWYAALPQFL 298
Query: 428 SAEDVK 433
S ++ K
Sbjct: 299 SKQNDK 304
>gi|376285871|ref|YP_005159081.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae 31A]
gi|371579386|gb|AEX43054.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae 31A]
Length = 495
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 25/231 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV-AEYLSATGETAPSGFGVIPSNPD 154
L + GG VRD LL + +D+D D E + + EY +T FG + + D
Sbjct: 57 LYLVGGSVRDALLDELGHDLDFTTDAR--PEVVSAILEEYAPVVWDTGIE-FGTVSAEKD 113
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNI 213
+ I+ R + Y SR P ++FG T E D RRD T+N++ I
Sbjct: 114 GQQ-------------IEITTFRSDVYDGQSRNPEVQFGDTLEGDLIRRDFTVNAMAMEI 160
Query: 214 ---NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
+ D G G+ DL G + TP P+ +F DDPLR+LRA RF ++ F L +
Sbjct: 161 LPDGSMQFHDPVG-GMDDLAAGLLDTPAAPQQSFNDDPLRMLRAARFVSQLGFDLAPRVC 219
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
A A +I+ ERV E+D M+ G P + + L I++
Sbjct: 220 HAMTE---MADQITRITAERVQVELDKMICGKAPWDGVDVMVDTGLADIIY 267
>gi|297200922|ref|ZP_06918319.1| tRNA adenylyltransferase [Streptomyces sviceus ATCC 29083]
gi|197716906|gb|EDY60940.1| tRNA adenylyltransferase [Streptomyces sviceus ATCC 29083]
Length = 480
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + V + A E + FG + + D
Sbjct: 44 LALVGGSVRDALLGRLGNDLDFTTD-ARPQDVLKIVRPWADAVWEVGIA-FGTVGAQKDG 101
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 102 -------------YLIEVTTYRSEAYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMAVALP 148
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+A+F DDPLR++RA RF A+ DF + E+ A
Sbjct: 149 EKKFIDPHG-GLDDLAARVLRTPGTPEASFSDDPLRMMRAARFAAQLDFEVAPEV--VTA 205
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
E+ L +S ERV E++ ++ P K +T
Sbjct: 206 MTEMSGRLEI-VSAERVRDELNKLILSAHPRKGLT 239
>gi|154249575|ref|YP_001410400.1| polynucleotide adenylyltransferase region [Fervidobacterium nodosum
Rt17-B1]
gi|154153511|gb|ABS60743.1| Polynucleotide adenylyltransferase region [Fervidobacterium nodosum
Rt17-B1]
Length = 883
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 110/230 (47%), Gaps = 27/230 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD +L + YDIDI ++ G EFA +A+ L+A V+P +
Sbjct: 487 VVGGFVRDLILNIENYDIDIVVEGN-GIEFAKYMAQQLNAI---------VVPY-----E 531
Query: 158 HLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA + D + ID R E Y +P + T ++D YRRD TIN++ +N
Sbjct: 532 KFFTANVIFKDGFKIDVATARTEYYESPGELPQVDISTIKKDLYRRDFTINAMAIKLNPQ 591
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDE---ELKK 271
L DL+ G V + +F++DP R++RA+RF R+ F ++ +L K
Sbjct: 592 DFGTLYDFFNCQKDLEEG--VIRVLHNLSFVEDPTRMIRAVRFEQRYGFKMENYTLDLLK 649
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
S+ ++S R+ EI+ ++ P+KA+ + L + +F
Sbjct: 650 KNLSER----YLERVSGSRIRQEIEKILEEKNPIKAIKRMAELDMIKHIF 695
>gi|420236689|ref|ZP_14741169.1| tRNA adenylyltransferase [Parascardovia denticolens IPLA 20019]
gi|391880062|gb|EIT88559.1| tRNA adenylyltransferase [Parascardovia denticolens IPLA 20019]
Length = 509
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 119/238 (50%), Gaps = 21/238 (8%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+D +D+D + EF + ++ + FG + +
Sbjct: 59 LALVGGPVRDLLLGRDPHDLDFCT-SAKPEEFEPLLRKWGDGFWDMG-RKFGTLGT---- 112
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
K L T ++ I+ R E Y +SR P + +G + E D RRD T+NS+ +
Sbjct: 113 LKKLADGT----EVSIEVTTYRSEVYDPDSRKPEVDYGDSLEGDLSRRDFTVNSMAIRLP 168
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDF--ILDEELKKA 272
D+ G G+ DL + TP+ P+ +F DDPLR++RA+RF A+ DF LD A
Sbjct: 169 EMEFVDVFG-GLEDLDRRILRTPVEPEQSFSDDPLRMMRAVRFVAQLDFRISLDTSAAIA 227
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF-WIVFKLP-LQVE 328
+D ++ +S ERV E+ ++ P K + ++ L +++ +LP LQ+E
Sbjct: 228 RMADRIEI-----VSAERVRDELVKLLLSAHPRKGLENLVASGLADYVLPELPALQME 280
>gi|422323862|ref|ZP_16404899.1| tRNA adenylyltransferase [Rothia mucilaginosa M508]
gi|353344655|gb|EHB88956.1| tRNA adenylyltransferase [Rothia mucilaginosa M508]
Length = 474
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LL + D L E + ++ L A GE D
Sbjct: 28 LYLVGGIVRDNLLDDGGHFTDFDLTTDATPEQSEQI---LRAWGE----------HTWDI 74
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
K T + + + + R E Y +SR PT+ FGT D RRD TIN++ +
Sbjct: 75 GKEYGTISARKNGVVYEVTTYRAEVYVSDSRKPTVEFGTDLSADLVRRDFTINAMAAALP 134
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ V DL G G+ DL+ G + TP P+ +F +DPLR++RA RF ARF+ + E+ +A
Sbjct: 135 SGEVVDLFG-GVEDLRAGVLRTPRSPEESFSEDPLRMMRAARFAARFNLEVAPEVFEAMR 193
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
A IS ERV E+ ++ + P
Sbjct: 194 E---MAGRIEIISAERVRDELVKLIEADYP 220
>gi|315225766|ref|ZP_07867554.1| polyA polymerase family protein [Parascardovia denticolens DSM
10105 = JCM 12538]
gi|315119898|gb|EFT83030.1| polyA polymerase family protein [Parascardovia denticolens DSM
10105 = JCM 12538]
Length = 509
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 119/238 (50%), Gaps = 21/238 (8%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+D +D+D + EF + ++ + FG + +
Sbjct: 59 LALVGGPVRDLLLGRDPHDLDFCT-SAKPEEFEPLLRKWGDGFWDMG-RKFGTLGT---- 112
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
K L T ++ I+ R E Y +SR P + +G + E D RRD T+NS+ +
Sbjct: 113 LKKLADGT----EVSIEVTTYRSEVYDPDSRKPEVDYGDSLEGDLSRRDFTVNSMAIRLP 168
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDF--ILDEELKKA 272
D+ G G+ DL + TP+ P+ +F DDPLR++RA+RF A+ DF LD A
Sbjct: 169 EMEFVDVFG-GLEDLDRRILRTPVEPEQSFSDDPLRMMRAVRFVAQLDFRISLDTSAAIA 227
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF-WIVFKLP-LQVE 328
+D ++ +S ERV E+ ++ P K + ++ L +++ +LP LQ+E
Sbjct: 228 RMADRIEI-----VSAERVRDELVKLLLSAHPRKGLENLVASGLADYVLPELPALQME 280
>gi|419861849|ref|ZP_14384473.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|387981684|gb|EIK55229.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 495
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 25/231 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV-AEYLSATGETAPSGFGVIPSNPD 154
L + GG VRD LL + +D+D D E + + EY +T FG + + D
Sbjct: 57 LYLVGGSVRDALLDELGHDLDFTTDAR--PEVVSAILEEYAPEVWDTGIE-FGTVSAEKD 113
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNI 213
+ I+ R + Y SR P ++FG T E D RRD T+N++ I
Sbjct: 114 GQQ-------------IEITTFRSDVYDGQSRNPEVQFGDTLEGDLIRRDFTVNAMAMEI 160
Query: 214 ---NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
+ D G G+ DL G + TP P+ +F DDPLR+LRA RF ++ F L +
Sbjct: 161 LPDGSMQFHDPVG-GMDDLAAGLLDTPAAPQQSFNDDPLRMLRAARFVSQLGFDLAPRVC 219
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
A A +I+ ERV E+D M+ G P + + L I++
Sbjct: 220 HAMTE---MADQITRITAERVQVELDKMICGKAPWDGVDVMVDTGLADIIY 267
>gi|440533667|emb|CCP59177.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis Ia/SotonIa1]
gi|440534561|emb|CCP60071.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis Ia/SotonIa3]
Length = 410
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 159/366 (43%), Gaps = 66/366 (18%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
+T + ++ ++ LR+ + GG VRD LLG+ ++DIA N + T
Sbjct: 1 MTQSTLEVAKKIVRKLRNAGYQAYF--VGGSVRDMLLGRPIEEVDIA-TNASPTIVTTIF 57
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
+ LS + FG+I + + E AT + EDY + +
Sbjct: 58 PDTLSIG-----AAFGIIAVK-ENGQLFEVATFR-----------SDEDYEDGRHPNRVV 100
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
F + ++DA RRD TIN ++Y+ + DL G ADL+ I P+ FL+D LR+
Sbjct: 101 FASMKDDAIRRDFTINGMYYDPFEEKLFDLV-EGRADLERKIIRAIGHPRQRFLEDKLRI 159
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
LRA+RF A F LD + ++A + +L +S ER+ E+ M+ P +++ +
Sbjct: 160 LRAVRFAATLGFALDPQTEQAIIKE--LPSLPNSVSPERIWQELKKMLR-TAPYESLQLL 216
Query: 312 CGLTLFWIVFKLPLQVEPEVLEGCEMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAAL 371
L + I+F PE+ ++ + +L +A Q I S + AL
Sbjct: 217 TKLKVLPILF-------PEL----KVSSSGFLRSAIAFAQKIHDSQIPE--------IAL 257
Query: 372 FLPFRNTTYKDNKGKKIPVVNYTFRDSLKRKASDAETVMNIH----RVLEKFLSLIPSLV 427
LP FR+ K KA +A + + + ++LE + + +P +
Sbjct: 258 LLPL-------------------FREVDKEKALEAFSRLRVSNKELKLLEDWYAALPQFL 298
Query: 428 SAEDVK 433
S ++ K
Sbjct: 299 SKQNDK 304
>gi|365860771|ref|ZP_09400566.1| putative RNA nucleotidyltransferase [Streptomyces sp. W007]
gi|364009928|gb|EHM30873.1| putative RNA nucleotidyltransferase [Streptomyces sp. W007]
Length = 480
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D E K+ + + FG + S D
Sbjct: 44 LALVGGSVRDALLGRLGNDLDFTTDAR--PEDVLKIVRPWADSVWEVGIAFGTVGSQKDG 101
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R E Y SR P + +G + E+D RRD T+N++ +
Sbjct: 102 YQ-------------IEVTTYRSEAYDRTSRKPEVSYGDSIEDDLVRRDFTVNAMAVALP 148
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+A+F DDPLR+LRA RF A+ DF + ++ A
Sbjct: 149 QKEFVDPYG-GLKDLAERVLRTPGTPEASFSDDPLRMLRAARFAAQLDFEVAPDVVTAMT 207
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A+ +S ERV E++ ++ P K +
Sbjct: 208 E---MASRIGIVSAERVRDELNKLLLSQHPRKGL 238
>gi|255326495|ref|ZP_05367577.1| tRNA adenylyltransferase [Rothia mucilaginosa ATCC 25296]
gi|255296535|gb|EET75870.1| tRNA adenylyltransferase [Rothia mucilaginosa ATCC 25296]
Length = 474
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LL + D L E + ++ L A GE D
Sbjct: 28 LYLVGGIVRDNLLDDGGHFTDFDLTTDATPEQSEQI---LRAWGE----------HTWDI 74
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
K T + + + + R E Y +SR PT+ FGT D RRD TIN++ +
Sbjct: 75 GKEYGTISARKNGVVYEVTTYRAEVYVSDSRKPTVEFGTDLSADLVRRDFTINAMAAALP 134
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ V DL G G+ DL+ G + TP P+ +F +DPLR++RA RF ARF+ + E+ +A
Sbjct: 135 SGEVVDLFG-GVEDLRAGVLRTPRSPEESFSEDPLRMMRAARFAARFNLEVAPEVFEAMR 193
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
A IS ERV E+ ++ + P
Sbjct: 194 E---MAGRIEIISAERVRDELMKLIEADYP 220
>gi|160903130|ref|YP_001568711.1| CBS domain-containing protein [Petrotoga mobilis SJ95]
gi|160360774|gb|ABX32388.1| CBS domain containing protein [Petrotoga mobilis SJ95]
Length = 885
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 98 VAGGWVRDKLLGKDC---------YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGV 148
V GG+VRD LL + YDID+ ++ G F VA+ L A P
Sbjct: 487 VVGGFVRDLLLAINSKSNGTKSIPYDIDVVVEGD-GLLFGKYVAKQLRAKYVEHPKFHTC 545
Query: 149 IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINS 208
S K+ + ID R E Y E +P + T ++D YRRD +IN+
Sbjct: 546 -------SIFYRNGENKI--IRIDIATARTEYYEEAGELPKVELSTIKKDLYRRDFSINA 596
Query: 209 LFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
+ IN+ S L DL+ GKI P +F++DP R+LRAIRF RF F +
Sbjct: 597 MAIKINSGSFGILMDFFNCKKDLEEGKIRILYP--LSFIEDPTRILRAIRFEQRFGFEI- 653
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFK 322
E + V+ K++ R+ E++ ++ QP+KA+ + L + +F+
Sbjct: 654 EPNTLTKLEEAVENGYLEKVTGMRIREELEKILEEPQPMKAIKRMGKLKIILHLFE 709
>gi|294786232|ref|ZP_06751486.1| tRNA adenylyltransferase [Parascardovia denticolens F0305]
gi|294485065|gb|EFG32699.1| tRNA adenylyltransferase [Parascardovia denticolens F0305]
Length = 485
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 119/238 (50%), Gaps = 21/238 (8%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+D +D+D + EF + ++ + FG + +
Sbjct: 35 LALVGGPVRDLLLGRDPHDLDFCT-SAKPEEFEPLLRKWGDGFWDMG-RKFGTLGT---- 88
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
K L T ++ I+ R E Y +SR P + +G + E D RRD T+NS+ +
Sbjct: 89 LKKLADGT----EVSIEVTTYRSEVYDPDSRKPEVDYGDSLEGDLSRRDFTVNSMAIRLP 144
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDF--ILDEELKKA 272
D+ G G+ DL + TP+ P+ +F DDPLR++RA+RF A+ DF LD A
Sbjct: 145 EMEFVDVFG-GLEDLDRRILRTPVEPEQSFSDDPLRMMRAVRFVAQLDFRISLDTSAAIA 203
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF-WIVFKLP-LQVE 328
+D ++ +S ERV E+ ++ P K + ++ L +++ +LP LQ+E
Sbjct: 204 RMADRIEI-----VSAERVRDELVKLLLSAHPRKGLENLVASGLADYVLPELPALQME 256
>gi|357412364|ref|YP_004924100.1| polynucleotide adenylyltransferase [Streptomyces flavogriseus ATCC
33331]
gi|320009733|gb|ADW04583.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Streptomyces flavogriseus ATCC 33331]
Length = 481
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 100/219 (45%), Gaps = 30/219 (13%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D E K+ + + FG + S D
Sbjct: 44 LALVGGSVRDALLGRLGNDLDFTTDAR--PEDVLKIVRPWADSVWEVGIAFGTVGSQKDG 101
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R E Y SR P + +G + E+D RRD T+N++ +
Sbjct: 102 YQ-------------IEVTTYRSEAYDRTSRKPEVSYGDSIEDDLVRRDFTVNAMAVALP 148
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+A+F DDPLR+LRA RF A+ DF A
Sbjct: 149 HKEFIDPHG-GLDDLAQRVLRTPGTPEASFSDDPLRMLRAARFAAQLDF--------EVA 199
Query: 275 SDEVKAA--LAAKI---SRERVGTEIDLMVSGNQPVKAM 308
D VKA +A +I S ER+ E++ ++ P K +
Sbjct: 200 PDVVKAMTDMAGRIEIVSAERIREELNKLLLSGHPRKGL 238
>gi|443287890|ref|ZP_21026985.1| Polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Micromonospora lupini str. Lupac 08]
gi|385881977|emb|CCH22078.1| Polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Micromonospora lupini str. Lupac 08]
Length = 486
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 111/267 (41%), Gaps = 37/267 (13%)
Query: 53 MSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNT--------LRHFNLETVLRVAGGWVR 104
MSE P D+ ELT + + LL R L + GG VR
Sbjct: 1 MSEASAP-----HAADRRELTAAQRNAVAELLRVSPVADELGRRFVRAGHELHLVGGSVR 55
Query: 105 DKLLGKDCYDIDIALDNMMGS--EFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETA 162
D LLG+ D+D D AE + TG FG I D
Sbjct: 56 DALLGRLGDDLDFCTDAHPDETLRIVKGWAESIWETGRE----FGTIGLQRDG------- 104
Query: 163 TMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNINTSSVEDL 221
L ++ R E Y + SR P + +GT+ +ED RRD TIN++ ++ D
Sbjct: 105 ------LRLEVTTFRAESYDQVSRNPVVVYGTSLDEDLKRRDFTINAMAVSLPEHRFTDP 158
Query: 222 TGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAA 281
G G+ DL I TP P +F DDPLR+LRA RF A+ F + ++ A AA
Sbjct: 159 HG-GLDDLSAKVIRTPSTPGESFGDDPLRMLRAARFAAQLRFAVHPDVHTAMTE---MAA 214
Query: 282 LAAKISRERVGTEIDLMVSGNQPVKAM 308
+I+ ERV E ++ G P+ +
Sbjct: 215 DLDRITAERVRDEFTKLLCGVDPITGL 241
>gi|167037540|ref|YP_001665118.1| polynucleotide adenylyltransferase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115955|ref|YP_004186114.1| polynucleotide adenylyltransferase region [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|166856374|gb|ABY94782.1| Polynucleotide adenylyltransferase region [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929046|gb|ADV79731.1| Polynucleotide adenylyltransferase region [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 388
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 20/183 (10%)
Query: 83 LLNTLRHFNLETVLR--VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGE 140
L+ L+ + +T ++ + GG VRD LLG DID+ ++ G +FA + YL G+
Sbjct: 10 LIKLLKEISSKTKIKSYIVGGVVRDFLLGVKNLDIDVVVEGD-GIKFAYTLLSYLK--GD 66
Query: 141 TAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAY 200
+ TAT+ ID ++ R E Y ++ +PT+ F +D
Sbjct: 67 IVVY------------EAFRTATLSYDGFSIDVISARKEYYERSAALPTIEFSNIYDDMA 114
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD TIN+L Y++ + D G+ DLK G +V L K +F+DDP R+ RAIR+ R
Sbjct: 115 RRDFTINTLAYDVIEGKILDYFN-GLEDLKKG-LVRVLHSK-SFIDDPTRIFRAIRYATR 171
Query: 261 FDF 263
+ F
Sbjct: 172 YAF 174
>gi|297572329|ref|YP_003698103.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Arcanobacterium haemolyticum DSM 20595]
gi|296932676|gb|ADH93484.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Arcanobacterium haemolyticum DSM 20595]
Length = 497
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETA---PSGFGVIPSN 152
L + GG VRD LLG +D D S + E L++ G FG I ++
Sbjct: 54 LAMVGGPVRDALLGLPIHDYDFTT-----SARPDETEELLASWGGAHWDIGREFGTIGAS 108
Query: 153 PDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFY 211
D L ++ R E+Y SR P + +G + E D RRD T+N++
Sbjct: 109 RDG-------------LVVEVTTYRAEEYDAESRKPGVHYGDSLEGDVTRRDFTVNAMAI 155
Query: 212 NINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
+ + + D TG G+ DL G + TP+ + +F DDPLR++RA RF A+ F + +++++
Sbjct: 156 RLPSMELADTTG-GLDDLVAGVLRTPVTARQSFDDDPLRIMRAARFAAQLGFDVADDVRE 214
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A A+ +S ERV E+ ++ P K +
Sbjct: 215 AMTE---MASRLEIVSVERVQAELHRLMISPHPRKGL 248
>gi|357020466|ref|ZP_09082697.1| tRNA adenylyltransferase [Mycobacterium thermoresistibile ATCC
19527]
gi|356478214|gb|EHI11351.1| tRNA adenylyltransferase [Mycobacterium thermoresistibile ATCC
19527]
Length = 485
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + + + A +T FG
Sbjct: 39 LYLVGGSVRDALLGRLGTDLDFTTDARP-EQMQKMLRPWAEAMWDTGIE-FG-------- 88
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T + L ++ R + Y + SR P +RFG ++D RRD T+N++ I
Sbjct: 89 -----TVGVAKRGLRLEITTFRADSYDQVSRHPEVRFGDRLDDDLVRRDFTVNAMAVRIT 143
Query: 215 TSS------VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
S D G G+A L+ + TP P+ +F DDPLR+LRA RF ++ F +
Sbjct: 144 PDSPGGFGEFHDPLG-GLAHLRARTLDTPAEPEVSFGDDPLRMLRAARFVSQLRFTVAPR 202
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
++ A E A A+IS ERV E+D ++ G+ PV +
Sbjct: 203 VRAAI---ERMAPQLARISPERVQAELDKLILGDDPVAGI 239
>gi|291438534|ref|ZP_06577924.1| RNA nucleotidyltransferase [Streptomyces ghanaensis ATCC 14672]
gi|291341429|gb|EFE68385.1| RNA nucleotidyltransferase [Streptomyces ghanaensis ATCC 14672]
Length = 475
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 13/231 (5%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + V + A E + FG + + +
Sbjct: 30 LALVGGSVRDALLGRLGNDLDFTTD-ARPQDVLKIVRPWADAVWEVGIA-FGTVGAQKEA 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ + I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 88 RVGDADRSFQ-----IEVTTYRSEAYDRTSRKPEVSYGDSIEEDLARRDFTVNAMAVALP 142
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+ +F DDPLR+LRA RF A+ DF + E+ AA
Sbjct: 143 EKRFVDPYG-GLDDLATRVLRTPGTPEESFSDDPLRMLRAARFAAQLDFEVAPEV--VAA 199
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF-WIVFKLP 324
E+ L +S ERV E++ ++ + P K +T + L +++ +LP
Sbjct: 200 MKEMAGRLEI-VSAERVRDELNKLILSSHPRKGLTLLTETGLAEYVLPELP 249
>gi|289706703|ref|ZP_06503051.1| tRNA adenylyltransferase [Micrococcus luteus SK58]
gi|289556623|gb|EFD49966.1| tRNA adenylyltransferase [Micrococcus luteus SK58]
Length = 483
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LG+ D+D D + A G G + D
Sbjct: 38 LSLVGGPVRDLFLGRPSLDLDFTTDADPDASEAV---------------GAGWADATWDV 82
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ T + ++ R E Y SR P + FG + E+D RRD T+N++ +
Sbjct: 83 GRRFGTIGFRKAGWQLEVTTYRAEQYDPASRKPQVAFGDSLEDDLLRRDFTVNAMALRLP 142
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ D G G+ DL G + TP P+ +F DDPLR++RA RF ++ F + E+++A
Sbjct: 143 ALELVDPFG-GMQDLHAGVLRTPGTPEDSFSDDPLRMMRAARFASQLGFAVAPEVEQAMT 201
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ + + IS ERV E+ +V G P
Sbjct: 202 AMAERITI---ISAERVREELVKLVCGAHP 228
>gi|337286308|ref|YP_004625781.1| Polynucleotide adenylyltransferase region [Thermodesulfatator
indicus DSM 15286]
gi|335359136|gb|AEH44817.1| Polynucleotide adenylyltransferase region [Thermodesulfatator
indicus DSM 15286]
Length = 406
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 86/170 (50%), Gaps = 21/170 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLG D D+ D E K+ + G+ F ++
Sbjct: 56 LVGGSVRDLLLGIKPKDFDVGTDAR--PEEIRKLFRWSRIIGKR----FRLV-------- 101
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
H+ K I+ V R + +E + + FGT +DA+RRD+TIN+LFYNI S
Sbjct: 102 HVYFPGGKF----IEVVTFRGPETAEENGLEV--FGTPYQDAFRRDITINALFYNIADFS 155
Query: 218 VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDE 267
+ D G G+ DL+ G I PP F+ DP+R++RAIR AR FI++E
Sbjct: 156 IIDYVG-GMKDLRAGIIRVIGPPDIRFIRDPVRMIRAIRHAARTGFIIEE 204
>gi|396584380|ref|ZP_10484851.1| CCA tRNA nucleotidyltransferase [Actinomyces sp. ICM47]
gi|395547969|gb|EJG15328.1| CCA tRNA nucleotidyltransferase [Actinomyces sp. ICM47]
Length = 508
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LG +D D M S + E L+ G + D
Sbjct: 29 LALVGGPVRDAFLGVTPHDFD-----MTTSARPERTEELLAQWGN----------ATWDI 73
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
K T + D+ ++ R ++Y SR P + FG T E D RRD T+N++ +
Sbjct: 74 GKEFGTIGGRRGDVVVEVTTYRTDEYEIGSRKPEVTFGDTLEGDLTRRDFTVNAMAMRLP 133
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
++ D G G+ADL G + TP+ + +F DDPLR++RA RF A+ +D ++ A
Sbjct: 134 QMALVDPCG-GLADLADGNLRTPVSAEQSFDDDPLRIMRAARFSAQLGLDVDLDVMNAM- 191
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
E A+ +S ER+ E++ ++ P + +
Sbjct: 192 --ETMASRLEIVSAERIRAELERLIISPYPRRGI 223
>gi|302552677|ref|ZP_07305019.1| tRNA adenylyltransferase [Streptomyces viridochromogenes DSM 40736]
gi|302470295|gb|EFL33388.1| tRNA adenylyltransferase [Streptomyces viridochromogenes DSM 40736]
Length = 481
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 111/251 (44%), Gaps = 40/251 (15%)
Query: 80 FSCLLNTLRHFNLETVLRVA--------------------GGWVRDKLLGKDCYDIDIAL 119
S +L+ ++H + +LRVA GG VRD LLG+ D+D
Sbjct: 8 MSSVLSQVQHRAVNELLRVAPVADDLARRFQEAGFSLALVGGSVRDALLGRLGNDLDFTT 67
Query: 120 DNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCE 179
D + V + A E + FG + ++ + I+ R E
Sbjct: 68 D-ARPQDVLKIVRPWADAVWEVGIA-FGTVGAHKGGYQ-------------IEVTTYRSE 112
Query: 180 DYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPL 238
Y SR P + +G + EED RRD T+N++ + D G G+ DL + TP
Sbjct: 113 AYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMAVALPEKEFIDPHG-GLEDLASRVLRTPG 171
Query: 239 PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLM 298
P+ +F DDPLR++RA RF A+ DF + E+ A+ E A +S ERV E++ +
Sbjct: 172 TPEESFSDDPLRMMRAARFAAQLDFEVAPEV---VAAMEGMAGRIEIVSAERVRDELNKL 228
Query: 299 VSGNQPVKAMT 309
+ P K +T
Sbjct: 229 ILSPHPRKGLT 239
>gi|441515876|ref|ZP_20997663.1| putative tRNA nucleotidyltransferase [Gordonia amicalis NBRC
100051]
gi|441449339|dbj|GAC55624.1| putative tRNA nucleotidyltransferase [Gordonia amicalis NBRC
100051]
Length = 480
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D +V+ L G + D
Sbjct: 39 LYLVGGSVRDAVLGRLGNDLDFTTDAR-----PEQVSRLLK----------GWADAFWDV 83
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
T ++ D I+ R + Y + SR P + FG T E+D RRD T+N++ I
Sbjct: 84 GIEFGTVGVRKGDHQIEITTFRADTYDQVSRNPEVTFGETLEDDLVRRDFTVNAMAVRIG 143
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
ED G+ L G I TP P+ +F DDPLR+LRA+RF ++ F L + +A
Sbjct: 144 ARGAEDFCDPLDGMTALLAGVIDTPATPEQSFGDDPLRMLRAVRFISQLGFRLAPRVWQA 203
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
E+ + +I+ ER+ E+D ++ G P+ A+
Sbjct: 204 IT--EMNGEI-DRITAERIRAELDKLICGEFPIDAI 236
>gi|296133143|ref|YP_003640390.1| Polynucleotide adenylyltransferase region [Thermincola potens JR]
gi|296031721|gb|ADG82489.1| Polynucleotide adenylyltransferase region [Thermincola potens JR]
Length = 876
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 21/227 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG+VRD LLG + D D+ ++ G FA ++AE+L FG
Sbjct: 481 IVGGFVRDLLLGVENLDFDLVVEGD-GIAFAKELAEFLCGRVRVHDK-FG---------- 528
Query: 158 HLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA + L D + ID R E Y + +P + + ++D YRRD TIN++ ++
Sbjct: 529 ---TAIVILSDEFKIDVATARTEYYEYPAALPKVEISSLKQDLYRRDFTINAMAIALSQK 585
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ +L G DL+ K+V L +F++DP R+LRA+RF R+ F ++ + A A
Sbjct: 586 NFGELIDFFGGKRDLEE-KVVRVL-YNLSFVEDPTRILRAVRFEQRYGFTIEPQ-TLALA 642
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+KA + K+S +RV E+ ++ P+ A+ + L ++ V
Sbjct: 643 KGAIKAQILNKLSADRVREELKHILEETSPLGAIIRMKELGIWQFVL 689
>gi|28493767|ref|NP_787928.1| poly(A) polymerase [Tropheryma whipplei str. Twist]
gi|28476809|gb|AAO44897.1| poly(A) polymerase [Tropheryma whipplei str. Twist]
Length = 484
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 108/218 (49%), Gaps = 28/218 (12%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L + D+D A + + ++ + +S+ T + +G
Sbjct: 43 LALVGGPVRDCFLDRPVVDLDFATNAT--PQETLRLVKPISSGCWTTGARYG-------- 92
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T + ++ ++ R ++YS N+R P + FG + EED RRD T+N++ + +
Sbjct: 93 -----TVSARVKGRVVEITTYRSDNYSANTRKPKVSFGGSLEEDLIRRDFTVNAMAFRVP 147
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE----LK 270
+ + D++ G+ D+ + ++ TP+ P+ +F DDPLR+LRA R ++ F + E +K
Sbjct: 148 SGQLVDISS-GLQDIANKRLATPIKPELSFADDPLRMLRAARLSSQLGFKISENSLLAMK 206
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A ++ +S ERV E + ++ P ++
Sbjct: 207 DCAKRLKI-------VSAERVRGEFEKLLCCADPTGSL 237
>gi|28572951|ref|NP_789731.1| RNA nucleotidyltransferase [Tropheryma whipplei TW08/27]
gi|28411084|emb|CAD67469.1| putative RNA nucleotidyltransferase [Tropheryma whipplei TW08/27]
Length = 478
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 108/218 (49%), Gaps = 28/218 (12%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L + D+D A + + ++ + +S+ T + +G
Sbjct: 37 LALVGGPVRDCFLDRPVVDLDFATNAT--PQETLRLVKPISSGCWTTGARYG-------- 86
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T + ++ ++ R ++YS N+R P + FG + EED RRD T+N++ + +
Sbjct: 87 -----TVSARVKGRVVEITTYRSDNYSANTRKPKVSFGGSLEEDLIRRDFTVNAMAFRVP 141
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE----LK 270
+ + D++ G+ D+ + ++ TP+ P+ +F DDPLR+LRA R ++ F + E +K
Sbjct: 142 SGQLVDISS-GLQDIANKRLATPIKPELSFADDPLRMLRAARLSSQLGFKISENSLLAMK 200
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A ++ +S ERV E + ++ P ++
Sbjct: 201 DCAKRLKI-------VSAERVRGEFEKLLCCADPTGSL 231
>gi|302559683|ref|ZP_07312025.1| tRNA adenylyltransferase [Streptomyces griseoflavus Tu4000]
gi|302477301|gb|EFL40394.1| tRNA adenylyltransferase [Streptomyces griseoflavus Tu4000]
Length = 488
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + V + A + + FG + + D
Sbjct: 43 LALVGGSVRDALLGRLGNDLDFTTD-ARPQDVLRIVRPWADAVWDVGIA-FGTVGAQKDA 100
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ + I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 101 RVGDADRSFQ-----IEVTTYRSEAYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMAVALP 155
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+A+F DDPLR++RA RF A+ DF + E+ AA
Sbjct: 156 EKRFIDPHG-GLGDLAARALRTPGTPEASFSDDPLRMMRAARFAAQLDFEVAPEV--VAA 212
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
E+ + +S ERV E++ ++ P K ++
Sbjct: 213 MKEMAGRIEI-VSAERVRDELNKLILSAHPRKGLS 246
>gi|417932890|ref|ZP_12576227.1| CCA tRNA nucleotidyltransferase [Propionibacterium acnes
SK182B-JCVI]
gi|340774134|gb|EGR96623.1| CCA tRNA nucleotidyltransferase [Propionibacterium acnes
SK182B-JCVI]
Length = 499
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD L+G+ +D+D D A + + AT + FG I + D
Sbjct: 59 LYLVGGSVRDALMGRLGHDLDFTTDARPDDTEAI-LRKRTHATWDIG-RAFGTIGAQID- 115
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
D ++ R + Y +SR P + +G T ++D RRD T+N++ +
Sbjct: 116 ------------DWVVEVTTYRADAYHPDSRKPEIVYGETLKDDLIRRDFTVNAMALHAA 163
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T D G+AD+ G + TP PP+ +F DDPLR++RA RF ++ F + E+ +AA
Sbjct: 164 TRIFSDPYA-GLADIVAGVLRTPFPPERSFSDDPLRMMRAARFTSQLGFTVTNEV-RAAM 221
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D AA IS ER+ E+ + + P + +
Sbjct: 222 TD--MAARIEIISAERIRDELSKTLLTDHPREGL 253
>gi|410613955|ref|ZP_11325007.1| poly(A) polymerase [Glaciecola psychrophila 170]
gi|410166455|dbj|GAC38896.1| poly(A) polymerase [Glaciecola psychrophila 170]
Length = 419
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 24/240 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALD---NMMGSEFATKVAEYLSATGETAPSGFGVIPSNPD 154
+ GG VRD LLGK+ D D+ D + F + + A FG
Sbjct: 21 LVGGCVRDVLLGKEPKDFDVTTDATPEQIKGLF--RNCRLIGRRFRLAHIVFG------- 71
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR---FGTAEEDAYRRDLTINSLFY 211
+ +E AT + + D + + S++ ++ MR FG+ EEDA RRD TIN+++Y
Sbjct: 72 -REVIEVATFRGHHENNDEGDSKDSKQSDDGQL--MRDNVFGSIEEDAERRDFTINAMYY 128
Query: 212 NINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
NI S+ D G G+ +K+ KI P+ + +DP+R+LRA+RF A+ D + EE
Sbjct: 129 NIADYSISDFAG-GMEAIKNKKITLIGDPETRYREDPVRMLRAVRFAAKLDMHISEE--- 184
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFK--LPLQVEP 329
+A + A L A I R+ EI ++ Q + + LF +F PL ++P
Sbjct: 185 SAEPIKRMAPLMANIPPARLFEEILKLLLSGQGLATYKLLSEFHLFEPLFPQLAPLLLQP 244
>gi|407459743|ref|YP_006737846.1| poly A polymerase head domain-containing protein [Chlamydia
psittaci M56]
gi|405786601|gb|AFS25346.1| poly A polymerase head domain protein [Chlamydia psittaci M56]
Length = 410
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 28/236 (11%)
Query: 100 GGWVRDKLLGKDCYDIDIALDN---MMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
GG VRD L+GK +IDIA ++ + F +A L A FG+I + +
Sbjct: 27 GGCVRDMLMGKPIEEIDIATSAPPVIVSTIFPDTLA--LGA-------AFGIIVVK-ENN 76
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
+ E AT + E+Y + + F + +EDA RRD TIN ++Y+
Sbjct: 77 RLFEVATFR-----------SDENYQDGRHPERVIFSSMKEDALRRDFTINGMYYDPFEE 125
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
+ DL G DL+ I PK F +D LR+LRAIRF + F LD ++A +
Sbjct: 126 KLFDLV-EGRRDLEKRVIRAIGHPKLRFSEDKLRILRAIRFSSSLGFTLDPSTERAIIKE 184
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVL 332
+L +S ER+ E+ M+ N P +A++ + L + ++F + P +L
Sbjct: 185 --APSLVCSVSPERIWQELKKMLKKN-PYEALSLLIRLKIITVIFPELRDIPPSLL 237
>gi|405979338|ref|ZP_11037682.1| tRNA adenylyltransferase [Actinomyces turicensis ACS-279-V-Col4]
gi|404392719|gb|EJZ87777.1| tRNA adenylyltransferase [Actinomyces turicensis ACS-279-V-Col4]
Length = 562
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 124/276 (44%), Gaps = 30/276 (10%)
Query: 44 LGFLRCKATMSEQEPPRPVV-----VQVRDKIELTDTETKIFSCL----LNTLRHF-NLE 93
LG + K T+S Q RP + RD L F+ L L R F +
Sbjct: 11 LGVMSEKTTLSNQPNSRPHARVYADISARDIPSLMVNARNAFANLPSEILELGRVFEDAG 70
Query: 94 TVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
+ + GG VRD LG D +D D+ S K E L+ G+ GV
Sbjct: 71 EEIALVGGPVRDAFLGVDPHDFDLTT-----SARPDKTEELLAMWGD------GVW---- 115
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYN 212
D K T + ++ ++ R + Y SR P + FG T E D RRD T+N++
Sbjct: 116 DIGKEFGTIGGRRKNVVVEVTTYRTDSYEVGSRKPEVAFGDTLEGDLTRRDFTVNAMAMR 175
Query: 213 INTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + ++ D G+ DL ++ TP+ + +F DDPLR++RA RF A+ +D ++ A
Sbjct: 176 LPSMTLVD-PHNGLEDLAASRLRTPVTAEQSFDDDPLRIMRAARFSAQLGIDVDMDVMDA 234
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
E+ A+ +S ER+ E+ ++ + P + +
Sbjct: 235 M---EIMASRLEIVSAERICAELQRLIISHWPRRGL 267
>gi|377557916|ref|ZP_09787539.1| putative tRNA nucleotidyltransferase [Gordonia otitidis NBRC
100426]
gi|377524911|dbj|GAB32704.1| putative tRNA nucleotidyltransferase [Gordonia otitidis NBRC
100426]
Length = 487
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 25/218 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D +E + ++ A +T FG I
Sbjct: 46 LYLVGGSVRDAVLGRLGNDLDFTTD-ARPAEIVRLLTGWVDAIWDTGIE-FGTI------ 97
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ + D+ I+ R + Y R P + FG + + D RRD T+N++ I
Sbjct: 98 -------SARKGDVMIEITTFRADQYDRLGRNPDVTFGDSLDADLVRRDFTMNAMAVAIG 150
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
S + G+ L G I TP P+ +F DDPLR+LRA+RF ++ F L + A
Sbjct: 151 PSGPAEFHDPLDGMTALLAGIIDTPATPQESFNDDPLRMLRAVRFVSQLGFRLAPRVFDA 210
Query: 273 AA--SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+DE+ +I+ ERV TE+D ++ G P++A+
Sbjct: 211 ITEMADEIN-----RITAERVRTELDKLILGEHPIEAI 243
>gi|333922219|ref|YP_004495800.1| putative tRNA nucleotidyltransferase [Amycolicicoccus subflavus
DQS3-9A1]
gi|333484440|gb|AEF43000.1| putative tRNA nucleotidyltransferase [Amycolicicoccus subflavus
DQS3-9A1]
Length = 491
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 116/250 (46%), Gaps = 33/250 (13%)
Query: 88 RHFN-LETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGF 146
R F+ + + L + GG VRD +LG+ D+D N + + + A ET + F
Sbjct: 38 RRFDAIGSELYLVGGSVRDAMLGRLGKDLDFTT-NALPETVREALRGWADAVWETGIA-F 95
Query: 147 GVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLT 205
G I S Q +E T R + Y R P + +G + +D RRD
Sbjct: 96 GTI-SASKQGVQVEITTY------------RTDSYDRVGRKPEVSYGDSLNDDLVRRDFR 142
Query: 206 INSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDF 263
+N++ + S + T G+ADL G + TP P+ +F DDPLR+LRA RF ++
Sbjct: 143 VNAMAVQVRVSGIGSFTDPLNGLADLAAGVLDTPAAPEDSFNDDPLRMLRAARFASQLGL 202
Query: 264 ILDEELKKA--AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
L + +A +D++K +++ ER+ E+D ++ G+ P I GL + +
Sbjct: 203 QLTPRVDQAIREMADQIK-----RVTAERIRAELDKLMEGSDP------IAGLEVL-VST 250
Query: 322 KLPLQVEPEV 331
L V PEV
Sbjct: 251 GLAEHVLPEV 260
>gi|238754483|ref|ZP_04615838.1| Poly(A) polymerase [Yersinia ruckeri ATCC 29473]
gi|238707312|gb|EEP99674.1| Poly(A) polymerase [Yersinia ruckeri ATCC 29473]
Length = 467
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 118/295 (40%), Gaps = 65/295 (22%)
Query: 57 EPPRPVVVQVRD-----KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKD 111
E RP+ V RD + E++D K+ L L E L GG VRD LLGK
Sbjct: 23 EEKRPMTVIPRDQHNISRKEISDNALKV----LYRLNKSGFEAYL--VGGGVRDLLLGKK 76
Query: 112 CYDIDIA-----------------------LDNMMGSEFATKVAEYLSATGETAPSGFGV 148
D DI L ++M +VA + + P
Sbjct: 77 PKDFDITTSATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQQQPE---- 132
Query: 149 IPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINS 208
SN S M L D N+ FG+ EEDA RRD TINS
Sbjct: 133 --SNDKNSSQQAQNGMLLRD------NI---------------FGSIEEDAQRRDFTINS 169
Query: 209 LFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
L+Y I+ ++ D TG G+ DLK G I P+ + +DP+R+LRA+RF A+ D + E
Sbjct: 170 LYYGISDFALRDYTG-GLRDLKQGIIRLIGDPEVRYREDPVRMLRAVRFAAKLDMTISPE 228
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
A A+L +I R+ E ++ K +C LF +F L
Sbjct: 229 ---TAEPIPRLASLLREIPPARLFEESLKLLQSGYGYKTYLKLCEYQLFQPLFPL 280
>gi|443626054|ref|ZP_21110486.1| putative RNA nucleotidyltransferase [Streptomyces viridochromogenes
Tue57]
gi|443340478|gb|ELS54688.1| putative RNA nucleotidyltransferase [Streptomyces viridochromogenes
Tue57]
Length = 480
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + V + A E + FG + +
Sbjct: 44 LALVGGSVRDALLGRLGNDLDFTTD-ARPEDVLKIVRPWADAVWEVGIA-FGTVGAQKGG 101
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 102 YQ-------------IEVTTYRSESYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMAVALP 148
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+ +F DDPLR++RA RF A+ DF + E+ A
Sbjct: 149 EKEFIDPHG-GLEDLAARALRTPGTPEESFSDDPLRMMRAARFAAQLDFEVAPEVVTAMT 207
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
A +S ERV E++ +V + P K +T
Sbjct: 208 E---MAGRIEIVSAERVRDELNKLVLSDHPRKGLT 239
>gi|89897899|ref|YP_515009.1| poly (A) polymerase [Chlamydophila felis Fe/C-56]
gi|89331271|dbj|BAE80864.1| poly (A) polymerase [Chlamydophila felis Fe/C-56]
Length = 410
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 26/251 (10%)
Query: 83 LLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETA 142
+L LR+ + GG VRD L+GK +IDIA N +T + L A G
Sbjct: 12 ILQKLRNAGYQAYF--VGGCVRDMLMGKPIEEIDIA-TNAPPVIVSTIFPDTL-ALG--- 64
Query: 143 PSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRFGTAEEDAYR 201
+ FG+I D S+ E AT R ++ E+ R P + F + +EDA R
Sbjct: 65 -AAFGIIVVKED-SRLFEVAT------------FRSDENYEDGRHPERVVFSSMKEDALR 110
Query: 202 RDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF 261
RD TIN ++Y+ + DL G D++ + PK F +D LR+LRAIRF +
Sbjct: 111 RDFTINGMYYDPFEEKIFDLV-EGRRDIEKRVVRAIGHPKLRFSEDKLRILRAIRFSSSL 169
Query: 262 DFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
F LD ++A + L +S ER+ E+ M+ +P +A+ + L + ++F
Sbjct: 170 GFTLDPATERAIVRE--APTLVNSVSPERIWQELRKMLK-QRPYEALYLLIKLKIITVIF 226
Query: 322 KLPLQVEPEVL 332
V P +L
Sbjct: 227 PELRDVPPSLL 237
>gi|385240243|ref|YP_005808085.1| polyA polymerase [Chlamydia trachomatis G/9768]
gi|385241169|ref|YP_005809010.1| polyA polymerase [Chlamydia trachomatis G/11222]
gi|385243021|ref|YP_005810860.1| polyA polymerase [Chlamydia trachomatis G/9301]
gi|385246629|ref|YP_005815451.1| polyA polymerase [Chlamydia trachomatis G/11074]
gi|296436248|gb|ADH18422.1| polyA polymerase [Chlamydia trachomatis G/9768]
gi|296437177|gb|ADH19347.1| polyA polymerase [Chlamydia trachomatis G/11222]
gi|296438108|gb|ADH20269.1| polyA polymerase [Chlamydia trachomatis G/11074]
gi|297140609|gb|ADH97367.1| polyA polymerase [Chlamydia trachomatis G/9301]
gi|440525632|emb|CCP50883.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis K/SotonK1]
gi|440529199|emb|CCP54683.1| tRNA CCA-pyrophosphorylase [Chlamydia trachomatis D/SotonD6]
Length = 410
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 25/254 (9%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
+T + ++ ++ LR+ + GG VRD LLG+ ++DIA N + T
Sbjct: 1 MTQSTLEVAKKIVRKLRNAGYQAYF--VGGSVRDMLLGRPIEEVDIA-TNASPTIVTTIF 57
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR 191
+ LS + FG+I + + E AT + EDY + +
Sbjct: 58 PDTLSIG-----AAFGIIAVK-ENGQLFEVATFR-----------SDEDYEDGRHPNRVV 100
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
F + ++DA RRD TIN ++Y+ + DL G ADL+ I P+ FL+D LR+
Sbjct: 101 FASMKDDAIRRDFTINGMYYDPFEEKLFDLV-EGRADLERKIIRAIGHPRQRFLEDKLRI 159
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV--SGNQPVKAMT 309
LRAIRF A F LD + ++A + +L +S ER+ E+ M+ + + ++ +T
Sbjct: 160 LRAIRFAATLGFALDPQTEQAIIKE--LPSLPNSVSPERIWQELKKMLRTAPYESLQLLT 217
Query: 310 HICGLTLFWIVFKL 323
+ GL + + K+
Sbjct: 218 KLKGLPILFPELKV 231
>gi|308180685|ref|YP_003924813.1| tRNA CCA-pyrophosphorylase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380032665|ref|YP_004889656.1| tRNA nucleotidyltransferase/poly(A) polymerase [Lactobacillus
plantarum WCFS1]
gi|73619787|sp|Q88W02.1|CCA_LACPL RecName: Full=CCA-adding enzyme; AltName: Full=CCA tRNA
nucleotidyltransferase; AltName: Full=tRNA
CCA-pyrophosphorylase; AltName: Full=tRNA
adenylyl-/cytidylyl- transferase; AltName: Full=tRNA
nucleotidyltransferase; AltName: Full=tRNA-NT
gi|308046176|gb|ADN98719.1| tRNA CCA-pyrophosphorylase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342241908|emb|CCC79142.1| tRNA nucleotidyltransferase/poly(A) polymerase [Lactobacillus
plantarum WCFS1]
Length = 407
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD +LGK +D+DIA S F +V + T +T V+ D
Sbjct: 31 GGCVRDTILGKPLHDVDIAT-----SAFPAEVKQLFKRTVDTGIEHGTVMIL--DHGNGY 83
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVE 219
ET T + + DF R D R + +ED RRD TIN+L N ++
Sbjct: 84 ETTTFRTESGYQDF---RRPDQVTFVR-------SLKEDLKRRDFTINALAMTANGEVID 133
Query: 220 DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVK 279
G +AD++ G + + F +D LR++RA+RF ++ F ++ + ++A A +
Sbjct: 134 LFDG--LADMEQGILRAVGVAEERFHEDALRMMRAVRFASQLGFTIESQTEQAIADN--- 188
Query: 280 AALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF 317
AAL AKI+ ER E + ++ G PV +T + L+
Sbjct: 189 AALLAKIAVERTRVEWEKLLMGQHPVAGLTGLLTTDLY 226
>gi|363419943|ref|ZP_09308040.1| tRNA nucleotidyltransferase [Rhodococcus pyridinivorans AK37]
gi|359736615|gb|EHK85558.1| tRNA nucleotidyltransferase [Rhodococcus pyridinivorans AK37]
Length = 484
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 29/220 (13%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD +LG+ D+D D + E ++ TG FG I +
Sbjct: 43 LYLVGGSVRDAVLGRLGTDLDFTTDARPEVVQELLRGFVDHQWDTG----IDFGTISA-- 96
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
K LE ++ R + Y +R P +++GT+ E+D RRD T+N++
Sbjct: 97 --VKGLEQ---------LEITTFRSDAYDRVTRHPIVKYGTSLEDDLVRRDFTVNAMAVR 145
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I + G+ L G + TP P+ +F DDPLR+LRA RF ++ F L E +
Sbjct: 146 IGPDGAGEFVDPLGGMDSLLAGVLDTPAKPEDSFHDDPLRMLRAARFVSQLGFALTERVH 205
Query: 271 KAAAS--DEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A S DE+ +IS ERV E+D ++ G+ P++ +
Sbjct: 206 TAIVSMADEI-----LRISAERVQAELDKLILGDYPIEGI 240
>gi|254556742|ref|YP_003063159.1| tRNA CCA-pyrophosphorylase [Lactobacillus plantarum JDM1]
gi|448821375|ref|YP_007414537.1| CCA-adding enzyme [Lactobacillus plantarum ZJ316]
gi|254045669|gb|ACT62462.1| tRNA CCA-pyrophosphorylase [Lactobacillus plantarum JDM1]
gi|448274872|gb|AGE39391.1| CCA-adding enzyme [Lactobacillus plantarum ZJ316]
Length = 407
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD +LGK +D+DIA S F +V + T +T V+ D
Sbjct: 31 GGCVRDTILGKPLHDVDIAT-----SAFPAEVKQLFKRTVDTGIEHGTVMIL--DHGNGY 83
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVE 219
ET T + + DF R D R + +ED RRD TIN+L N ++
Sbjct: 84 ETTTFRTESGYQDF---RRPDQVTFVR-------SLKEDLKRRDFTINALAMTANGEVID 133
Query: 220 DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVK 279
G +AD++ G + + F +D LR++RA+RF ++ F ++ + ++A A +
Sbjct: 134 LFDG--LADMEQGILRAVGVAEERFHEDALRMMRAVRFASQLGFTIESQTEQAIADN--- 188
Query: 280 AALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF 317
AAL AKI+ ER E + ++ G PV +T + L+
Sbjct: 189 AALLAKIAVERTRVEWEKLLMGQHPVAGLTGLLTTDLY 226
>gi|297584686|ref|YP_003700466.1| CBS domain-containing protein [Bacillus selenitireducens MLS10]
gi|297143143|gb|ADH99900.1| CBS domain containing protein [Bacillus selenitireducens MLS10]
Length = 869
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 33/269 (12%)
Query: 69 KIELTDTETK--------IFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALD 120
K +LT+T K I S + T H N+ L GG VRD LL D+DI ++
Sbjct: 443 KRQLTETMKKQLHPDLFSILSLIGKTADHLNMSAYL--IGGMVRDLLLQHANEDMDIVVE 500
Query: 121 NMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLW-IDFVNLRCE 179
+AE L A S G I ++ + TAT K + ID + R E
Sbjct: 501 GD-----GIVLAEELKA------SYGGQIRTHAE----FRTATWKHPAGYKIDLTSARTE 545
Query: 180 DYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTP 237
Y + +P + T +ED +RRD TIN++ I+ DL G DL G+I T
Sbjct: 546 YYDFPAALPKVELSTIKEDLFRRDFTINAMGICISGKEFGDLLDYFHGFEDLNKGRIRTL 605
Query: 238 LPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDL 297
+F++DP R+LRA+RF RF F +D++ + A A +S+ R +E+
Sbjct: 606 Y--NLSFVEDPTRILRAVRFENRFGFQMDDQTEDLAIQ---SANNLLSVSKSRQSSELSR 660
Query: 298 MVSGNQPVKAMTHICGLTLFWIVFKLPLQ 326
M P+++ + LT+ + +Q
Sbjct: 661 MFYEEDPLQSFKRLKQLTITSYILSSKVQ 689
>gi|52696111|pdb|1VFG|A Chain A, Crystal Structure Of Trna Nucleotidyltransferase Complexed
With A Primer Trna And An Incoming Atp Analog
gi|52696112|pdb|1VFG|B Chain B, Crystal Structure Of Trna Nucleotidyltransferase Complexed
With A Primer Trna And An Incoming Atp Analog
Length = 390
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 28/206 (13%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLGK+ +D+D ++ A ++A+ L+ G V P +
Sbjct: 15 IVGGVVRDILLGKEVWDVDFVVEGN-----AIELAKELARR-----HGVNVHPFPEFGTA 64
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT-- 215
HL+ +KL +F R E Y P + + +ED RRD TIN++ ++N
Sbjct: 65 HLKIGKLKL-----EFATARRETYPRPGAYPKVEPASLKEDLIRRDFTINAMAISVNLED 119
Query: 216 -SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD---EELKK 271
++ D G G+ DLK K++ L P +F++DP+R+LRA+RF R +F L E+L K
Sbjct: 120 YGTLIDYFG-GLRDLKD-KVIRVLHP-VSFIEDPVRILRALRFAGRLNFKLSRSTEKLLK 176
Query: 272 AAASDEVKAALAAKISRERVGTEIDL 297
A V L + R R+ EI L
Sbjct: 177 QA----VNLGLLKEAPRGRLINEIKL 198
>gi|300767473|ref|ZP_07077385.1| tRNA adenylyltransferase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|418275425|ref|ZP_12890748.1| tRNA nucleotidyltransferase/poly(A) polymerase [Lactobacillus
plantarum subsp. plantarum NC8]
gi|300495292|gb|EFK30448.1| tRNA adenylyltransferase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|376008976|gb|EHS82305.1| tRNA nucleotidyltransferase/poly(A) polymerase [Lactobacillus
plantarum subsp. plantarum NC8]
Length = 407
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD +LGK +D+DIA S F +V + T +T V+ D
Sbjct: 31 GGCVRDTILGKPLHDVDIAT-----SAFPAEVKQLFKRTVDTGIEHGTVMIL--DHGNGY 83
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVE 219
ET T + + DF R D R + +ED RRD TIN+L N ++
Sbjct: 84 ETTTFRTESGYQDF---RRPDQVTFVR-------SLKEDLKRRDFTINALAMTANGEVID 133
Query: 220 DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVK 279
G +AD++ G + + F +D LR++RA+RF ++ F ++ + ++A A +
Sbjct: 134 LFDG--LADMEQGILRAVGVAEERFHEDALRMMRAVRFASQLGFTIESQTEQAIADN--- 188
Query: 280 AALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF 317
AAL AKI+ ER E + ++ G PV +T + L+
Sbjct: 189 AALLAKIAVERTRVEWEKLLMGQHPVAGLTGLLTTDLY 226
>gi|206901253|ref|YP_002251206.1| polyA polymerase family protein [Dictyoglomus thermophilum H-6-12]
gi|206740356|gb|ACI19414.1| polyA polymerase family protein [Dictyoglomus thermophilum H-6-12]
Length = 845
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 29/274 (10%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG+VRD LLG+ +D+DI ++ + +K+ + T P FG K +
Sbjct: 476 GGFVRDLLLGQSNFDLDIVVEGDI-QLIISKIMDKWEGKVITHPQ-FGTSEIILSDGKRI 533
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS-- 217
+ AT R E Y E +P + + D RRD TIN+L ++N +
Sbjct: 534 DIATA------------RIEHYEEPGSLPKVERSSLWLDLKRRDFTINALAMSLNEENFG 581
Query: 218 -VEDLTGRGIADL--KHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ DL G G+ DL K +I+ L +F++DP R+LR IR AR F +E+ K
Sbjct: 582 EIIDLYG-GLEDLTRKELRILHNL----SFVEDPTRILRGIRLEARLGFTFEEKTFK-LL 635
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEG 334
+ ++ KI++ER+ EI L++ +QP K + + L +F P++ P+ E
Sbjct: 636 KEAIENGFLNKIAKERLKDEIILILQESQPEKVLKRLEELNALSYIF--PIRKLPKNFEK 693
Query: 335 CEMFCTAYLDAAWDLT--QLIGSSTFNDDQRRLS 366
++L +I +T ++ ++ L
Sbjct: 694 KNQILKNEYPQKYELQILNIISEATLDEGKKWLQ 727
>gi|56964308|ref|YP_176039.1| hypothetical protein ABC2543 [Bacillus clausii KSM-K16]
gi|56910551|dbj|BAD65078.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 698
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 110/234 (47%), Gaps = 27/234 (11%)
Query: 92 LETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPS 151
L+ + + GG VRD L + DID+ ++ G FA ++A + + S FG
Sbjct: 329 LQVPVYLVGGLVRDFFLKRPHKDIDLVVEGD-GIAFAKQLATAFGGSVRSHES-FGTATW 386
Query: 152 NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFY 211
+Q ID V R E Y + +PT+R + ED RRD +IN++
Sbjct: 387 ANEQD--------------IDIVTCRKEFYLQKGALPTVRPASIYEDLARRDFSINAMAI 432
Query: 212 NINTSSVEDL----TGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDE 267
IN SS ++ G+ KH +I+ PL +F++DP R+ RA+RFG R +F L
Sbjct: 433 QINRSSFGNVLDVFQGKQALIDKHIRILHPL----SFIEDPTRLFRAVRFGLRLNFSLSS 488
Query: 268 ELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
E A + AAL IS +R+ E+DL+ + + + L ++ +F
Sbjct: 489 ETIHQAT--KTGAAL-HHISAKRLRQELDLLANEGVLFEGFRQLADLHVWTTLF 539
>gi|383824212|ref|ZP_09979396.1| poly(A) polymerase [Mycobacterium xenopi RIVM700367]
gi|383337485|gb|EID15861.1| poly(A) polymerase [Mycobacterium xenopi RIVM700367]
Length = 480
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPD 154
L + GG VRD +L + D+D + D E + + A +T FG + +
Sbjct: 38 ALYLVGGSVRDAVLDRLSPDLDFSTDARP-EEVQAILRGWADALWDTGIE-FGTVGAGKG 95
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNI 213
+ + ++ R + Y SR P +RFG E+D RRD T+N++ I
Sbjct: 96 EHR-------------LEITTFRADRYDRVSRNPEVRFGDHLEDDLARRDFTVNAMAVRI 142
Query: 214 NTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
+ + G+A L+ G + TP P+ +F DDPLR+LRA RF ++ F + ++
Sbjct: 143 TPTGPGEFVDPLGGLAALRAGVLDTPSAPQESFADDPLRMLRAARFVSQLGFTVAPRVRA 202
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A E A A+I+ ERV E+D ++ G PV +
Sbjct: 203 AI---EDMAPQLARITAERVAAELDKLLLGRDPVAGI 236
>gi|329943259|ref|ZP_08292033.1| poly A polymerase head domain protein [Chlamydophila psittaci
Cal10]
gi|332287838|ref|YP_004422739.1| poly A polymerase [Chlamydophila psittaci 6BC]
gi|384451005|ref|YP_005663605.1| polynucleotide adenylyltransferase [Chlamydophila psittaci 6BC]
gi|384451992|ref|YP_005664590.1| poly A polymerase [Chlamydophila psittaci 01DC11]
gi|384452966|ref|YP_005665563.1| poly(A) polymerase [Chlamydophila psittaci 08DC60]
gi|384453945|ref|YP_005666541.1| poly A polymerase [Chlamydophila psittaci C19/98]
gi|384454924|ref|YP_005667519.1| poly(A) polymerase [Chlamydophila psittaci 02DC15]
gi|392377067|ref|YP_004064845.1| putative poly A polymerase [Chlamydophila psittaci RD1]
gi|406592817|ref|YP_006739997.1| poly A polymerase head domain-containing protein [Chlamydia
psittaci CP3]
gi|406593873|ref|YP_006741052.1| poly A polymerase head domain-containing protein [Chlamydia
psittaci NJ1]
gi|406594154|ref|YP_006742087.1| poly A polymerase head domain-containing protein [Chlamydia
psittaci MN]
gi|407457179|ref|YP_006735752.1| poly A polymerase head domain-containing protein [Chlamydia
psittaci VS225]
gi|407461115|ref|YP_006738890.1| poly A polymerase head domain-containing protein [Chlamydia
psittaci WC]
gi|410858850|ref|YP_006974790.1| putative poly A polymerase [Chlamydia psittaci 01DC12]
gi|449071566|ref|YP_007438646.1| polyA polymerase [Chlamydophila psittaci Mat116]
gi|313848410|emb|CBY17414.1| putative poly A polymerase [Chlamydophila psittaci RD1]
gi|325506735|gb|ADZ18373.1| poly A polymerase [Chlamydophila psittaci 6BC]
gi|328814806|gb|EGF84796.1| poly A polymerase head domain protein [Chlamydophila psittaci
Cal10]
gi|328915099|gb|AEB55932.1| polynucleotide adenylyltransferase [Chlamydophila psittaci 6BC]
gi|334692726|gb|AEG85945.1| poly A polymerase [Chlamydophila psittaci C19/98]
gi|334693702|gb|AEG86920.1| poly A polymerase [Chlamydophila psittaci 01DC11]
gi|334694681|gb|AEG87898.1| poly(A) polymerase [Chlamydophila psittaci 02DC15]
gi|334695655|gb|AEG88871.1| poly(A) polymerase [Chlamydophila psittaci 08DC60]
gi|405782586|gb|AFS21334.1| poly A polymerase head domain protein [Chlamydia psittaci MN]
gi|405784440|gb|AFS23187.1| poly A polymerase head domain protein [Chlamydia psittaci VS225]
gi|405787431|gb|AFS26175.1| poly A polymerase head domain protein [Chlamydia psittaci WC]
gi|405788689|gb|AFS27432.1| poly A polymerase head domain protein [Chlamydia psittaci CP3]
gi|405789745|gb|AFS28487.1| poly A polymerase head domain protein [Chlamydia psittaci NJ1]
gi|410811745|emb|CCO02400.1| putative poly A polymerase [Chlamydia psittaci 01DC12]
gi|449040074|gb|AGE75498.1| polyA polymerase [Chlamydophila psittaci Mat116]
Length = 410
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 28/236 (11%)
Query: 100 GGWVRDKLLGKDCYDIDIALDN---MMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
GG VRD L+GK +IDIA ++ + F +A L A FG+I + +
Sbjct: 27 GGCVRDMLMGKPIEEIDIATSAPPVIVSTIFPDTLA--LGA-------AFGIIVVK-ENN 76
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
+ E AT + E+Y + + F + +EDA RRD TIN ++Y+
Sbjct: 77 RLFEVATFR-----------SDENYQDGRHPERVIFSSMKEDALRRDFTINGMYYDPFEE 125
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
+ DL G DL+ I PK F +D LR+LRAIRF + F LD ++A +
Sbjct: 126 KLFDLV-EGRRDLEKRVIRAIGHPKLRFSEDKLRILRAIRFSSSLGFTLDPATERAIIKE 184
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVL 332
+L +S ER+ E+ M+ N P +A++ + L + ++F + P +L
Sbjct: 185 --APSLVCSVSPERIWQELKKMLKKN-PYEALSLLIRLKIITVIFPELRDIPPSLL 237
>gi|407454494|ref|YP_006733602.1| poly A polymerase head domain-containing protein [Chlamydia
psittaci 84/55]
gi|405781253|gb|AFS20003.1| poly A polymerase head domain protein [Chlamydia psittaci 84/55]
Length = 399
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 28/236 (11%)
Query: 100 GGWVRDKLLGKDCYDIDIALDN---MMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
GG VRD L+GK +IDIA ++ + F +A L A FG+I + +
Sbjct: 27 GGCVRDMLMGKPIEEIDIATSAPPVIVSTIFPDTLA--LGA-------AFGIIVVK-ENN 76
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
+ E AT + E+Y + + F + +EDA RRD TIN ++Y+
Sbjct: 77 RLFEVATFR-----------SDENYQDGRHPERVIFSSMKEDALRRDFTINGMYYDPFEE 125
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
+ DL G DL+ I PK F +D LR+LRAIRF + F LD ++A +
Sbjct: 126 KLFDLV-EGRRDLEKRVIRAIGHPKLRFSEDKLRILRAIRFSSSLGFTLDPATERAIIKE 184
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVL 332
+L +S ER+ E+ M+ N P +A++ + L + ++F + P +L
Sbjct: 185 --APSLVCSVSLERIWQELKKMLKKN-PYEALSLLIRLKIITVIFPELRDIPPSLL 237
>gi|392394361|ref|YP_006430963.1| tRNA nucleotidyltransferase/poly(A) polymerase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525439|gb|AFM01170.1| tRNA nucleotidyltransferase/poly(A) polymerase [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 873
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LL D+D ++ G FA +A+ L FG +
Sbjct: 476 VVGGFVRDILLKVPTQDLDFVIEGD-GHAFARALADQLQDVQVVFHDQFGTARLDFSDGS 534
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
HL+ A+ R EDYS +P + +D +RRD TIN++ IN+
Sbjct: 535 HLDVASS------------RREDYSSPGALPQVEESRLRDDMFRRDFTINAMAIAINSIH 582
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ DLK G+I +F++DP R+LRA+RF R+ F L +E ++ +
Sbjct: 583 YGELVDYYGGLRDLKQGEI--RFLHNLSFIEDPTRILRALRFAGRYGFRLAKETREGLYT 640
Query: 276 DEVKAALAAKISRERVGTEIDLMVS 300
+ A + K+S ER E M+S
Sbjct: 641 -ALDAGVLQKLSIERFTEEFMHMLS 664
>gi|296392447|ref|YP_003657331.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Segniliparus rotundus DSM 44985]
gi|296179594|gb|ADG96500.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Segniliparus rotundus DSM 44985]
Length = 513
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 29/220 (13%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV----AEYLSATGETAPSGFGVIPS 151
L + GG VRD LLG+ D+D D E K+ AE + TG FG + +
Sbjct: 75 LYLVGGSVRDALLGRLGDDLDFTTDAR--PEHTQKLLRGWAEEMWDTG----IAFGTVGA 128
Query: 152 NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLF 210
+ +K ++ R +DY ++SR P + FGT D RRD +N++
Sbjct: 129 LKNGNK-------------LEITTFRKDDYDQSSRNPAVDFGTDLRTDLTRRDFRMNAMA 175
Query: 211 YNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE 268
++ + G+ D+ G+I TP P+ +F DDPLR+LRA RF A+ F
Sbjct: 176 VSLTAQGCGEFVDPLGGLEDVLAGRIDTPDTPEISFGDDPLRMLRAARFAAQLGFTWSPR 235
Query: 269 LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+ +A A +I+ ERVG E+ ++ G V+ +
Sbjct: 236 VARATVD---MAGEITRITAERVGAELQKLIVGEHAVEGV 272
>gi|229815493|ref|ZP_04445824.1| hypothetical protein COLINT_02543 [Collinsella intestinalis DSM
13280]
gi|229808930|gb|EEP44701.1| hypothetical protein COLINT_02543 [Collinsella intestinalis DSM
13280]
Length = 481
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 83 LLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETA 142
+L+ L LE + GGWVRD L+G +DIDI E A + A E+
Sbjct: 30 VLSALEGAGLEAW--IVGGWVRDALMGAPGHDIDICCSGSW-EESAAALRSRGIAVVESG 86
Query: 143 PSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP--TMRFGTAEEDAY 200
FG I + D ++ I+ R + + + R P R E+D
Sbjct: 87 VK-FGGITAVVDGAR-------------IEVTAYRLDGFYTDGRHPENVQRATCVEDDLA 132
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD T+N++ ++ ++ GRG DL+ +I P+ F +D LR+LRA+RF R
Sbjct: 133 RRDFTVNAMAWHPARGLLDCYDGRG--DLERRQIRAVGEPRRRFEEDALRMLRAVRFACR 190
Query: 261 FDFILDEELKKAAASDEVKAALAAKISRERVGTEID 296
DF +D +A A A L +++RERVG E++
Sbjct: 191 LDFAMDPATAQALAE---CAPLLDQVARERVGIELE 223
>gi|239918793|ref|YP_002958351.1| tRNA adenylyltransferase [Micrococcus luteus NCTC 2665]
gi|281414981|ref|ZP_06246723.1| tRNA adenylyltransferase [Micrococcus luteus NCTC 2665]
gi|239840000|gb|ACS31797.1| tRNA adenylyltransferase [Micrococcus luteus NCTC 2665]
Length = 483
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LG+ D+D D + A G G + D
Sbjct: 38 LSLVGGPVRDLFLGRPSPDLDFTTDADPDASEAV---------------GAGWADATWDV 82
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ T + ++ R E Y SR P + FG + E+D RRD T+N++ +
Sbjct: 83 GRRFGTIGFRKAGWQLEVTTYRAEQYDPASRKPQVAFGDSLEDDLLRRDFTVNAMALRLP 142
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ D G G+ DL G + TP P+ +F DDPLR++RA RF ++ F + E+++A
Sbjct: 143 ALELVDPFG-GMRDLHAGVLRTPGTPEDSFSDDPLRMMRAARFASQLGFAVAPEVEQAMT 201
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ + + IS ERV E+ +V G P
Sbjct: 202 AMAERITI---ISAERVREELVKLVCGAHP 228
>gi|238785058|ref|ZP_04629054.1| Poly(A) polymerase [Yersinia bercovieri ATCC 43970]
gi|238714030|gb|EEQ06046.1| Poly(A) polymerase [Yersinia bercovieri ATCC 43970]
Length = 473
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 104/237 (43%), Gaps = 30/237 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET---APSGFGVIPSNPD 154
+ GG VRD LLGK D DI E K+ G A FG
Sbjct: 69 LVGGGVRDLLLGKKPKDFDITTSAT--PEQVRKLFRNCRLVGRRFRLAHVMFG------- 119
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR--------FGTAEEDAYRRDLTI 206
+ +E AT + + + ED +NS + FGT E+DA RRD TI
Sbjct: 120 -PEIIEVATFRGH-----HEQQQAEDSDKNSSQQALNGMLLRDNIFGTIEDDAQRRDFTI 173
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
NSL+Y I+ ++ D TG G+ DLK G I P+ + +DP+R+LRA+RF A+ D +
Sbjct: 174 NSLYYGISDFALRDYTG-GLRDLKEGIIRLIGDPETRYREDPVRMLRAVRFAAKLDMTIS 232
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
E A A+L +I R+ E ++ K +C LF +F L
Sbjct: 233 PE---TAEPIPRLASLLREIPPARLFEESLKLLQSGYGYKTYLKLCEYQLFQPLFPL 286
>gi|383499269|ref|YP_005412630.1| poly(A) polymerase [Rickettsia prowazekii str. BuV67-CWPP]
gi|380762015|gb|AFE50535.1| poly(A) polymerase [Rickettsia prowazekii str. BuV67-CWPP]
Length = 387
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 109/231 (47%), Gaps = 25/231 (10%)
Query: 97 RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSG--FGVIPSNPD 154
R+ GG VRD LL KD YDIDIA N+M E ++ SA + P+G FG I + +
Sbjct: 29 RLIGGCVRDALLDKDTYDIDIA-TNLMPGEAINILS---SANIKIIPTGLKFGTITAILN 84
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNI 213
K E T++ +D N R + F EDA RRD TIN+L Y
Sbjct: 85 NEK-FEITTLR-------------KDIECNGRHAKVIFSKDFAEDAARRDFTINALSYCP 130
Query: 214 NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+ + D G DL+ K+V +D LR+LR RF + + LD E KA
Sbjct: 131 FKNEIYDYFD-GFKDLQRAKVVFIGKAFNRIKEDYLRILRFFRFSSYYANQLDYESFKAC 189
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
D +K L +SRER+ +EID ++ + + + + + + ++F +
Sbjct: 190 --DTLKYGLKT-LSRERIKSEIDKIIVSKRATQILEAMFKIGILELIFSIQ 237
>gi|330470813|ref|YP_004408556.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Verrucosispora maris AB-18-032]
gi|328813784|gb|AEB47956.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Verrucosispora maris AB-18-032]
Length = 486
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D V + A ET FG I D
Sbjct: 47 LHLVGGSVRDALLGRLGEDLDFCTDAHPDQTLGI-VRGWAEAIWETGRE-FGTIGCQRDG 104
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
L ++ R E Y + SR P + +GT ED RRD TIN++ ++
Sbjct: 105 -------------LRLEITTFRAESYDQVSRNPVVEYGTNLTEDLRRRDFTINAMAVSLP 151
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ADL + TP P +F DDPLR+LRA RF A+ F + ++ A
Sbjct: 152 DHRFTDPYG-GLADLAAKVVRTPGTPAESFGDDPLRMLRAARFAAQLRFAVHPDVYAAMT 210
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
AA +I+ ER+ E ++ P+ +
Sbjct: 211 R---MAADLDRITAERIRDEFTKLLCAADPITGL 241
>gi|320095130|ref|ZP_08026839.1| polyA polymerase family protein [Actinomyces sp. oral taxon 178
str. F0338]
gi|319977997|gb|EFW09631.1| polyA polymerase family protein [Actinomyces sp. oral taxon 178
str. F0338]
Length = 532
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LG +D D+ G + E L G D K
Sbjct: 59 GGPVRDAFLGVAPHDFDLTTSARPG-----RTEELLGQWGNAVW----------DIGKEF 103
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTSSV 218
T + D+ ++ R + Y SR P + FG T E D RRD T+N++ + ++
Sbjct: 104 GTIGARRGDVVVEVTTYRADSYQIGSRKPEVTFGDTLEGDLTRRDFTVNAMAMRLPRMAL 163
Query: 219 EDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEV 278
D G G+ADL G + TP+ + +F DDPLR++RA RF A+ +D ++ A E
Sbjct: 164 VDPCG-GLADLAAGNLRTPVSAEQSFDDDPLRIMRAARFSAQLGMDVDLDVMNAM---ED 219
Query: 279 KAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A +S ER+ TE++ ++ P + +
Sbjct: 220 MAHRLGIVSAERIRTELERLIVSPHPRRGI 249
>gi|387131369|ref|YP_006294259.1| Poly(A) polymerase [Methylophaga sp. JAM7]
gi|386272658|gb|AFJ03572.1| Poly(A) polymerase [Methylophaga sp. JAM7]
Length = 453
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 20/225 (8%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLG + D DIA + + + L F ++ +++
Sbjct: 63 LVGGCVRDILLGYEPKDFDIATNAL------PEQVHQLFRRSRMIGRRFKLVHVRFGRNE 116
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+E AT + E+ + + +GT E+DA+RRD TIN+L+YNI +
Sbjct: 117 IIEVATFR--------APPEAENQQDGRIMQDNVYGTLEQDAWRRDFTINALYYNIADFT 168
Query: 218 VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDE 277
+ D TG GIADL+ G I + + +DP+R+LRA+RF A+ L+ +K
Sbjct: 169 IVDYTG-GIADLQQGLIRLIGEQRVRYREDPVRMLRALRFKAKLGLALESVTEKHITE-- 225
Query: 278 VKAALAAKISRERVGTE-IDLMVSGNQPVKAMTHICGLTLFWIVF 321
AAL I R+ E + L +SG Q V+ +C +F +F
Sbjct: 226 -LAALLKDIPPARLFDETLKLYLSG-QAVQTHQLLCQYGIFEALF 268
>gi|424825535|ref|ZP_18250522.1| putative poly A polymerase [Chlamydophila abortus LLG]
gi|333410634|gb|EGK69621.1| putative poly A polymerase [Chlamydophila abortus LLG]
Length = 410
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 28/243 (11%)
Query: 100 GGWVRDKLLGKDCYDIDIALDN---MMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
GG VRD L+G+ +IDIA ++ + F +A + FG+I + +
Sbjct: 27 GGCVRDMLMGRPIEEIDIATSAPPVIVSTIFPDTLA---------IGAAFGIIVVK-ENN 76
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
+ E T + E+Y++ + F + +EDA RRD TIN ++Y+
Sbjct: 77 RLFEVTTFR-----------SDENYTDGRHPERVIFSSMKEDALRRDFTINGMYYDPFEE 125
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
+ DL G DL+ I PK F +D LR+LRAIRF + F LD ++A +
Sbjct: 126 KLYDLV-EGRRDLEKRVIRAIGHPKLRFSEDKLRILRAIRFSSSLGFTLDPATERAIIKE 184
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGCE 336
+L +S ER+ E+ M+ N P +A++ + L + I+F + P +L
Sbjct: 185 --APSLVCSVSPERIWQELKKMLKKN-PYEALSLLIQLKIMTIIFPELRDIPPSLLRTSS 241
Query: 337 MFC 339
F
Sbjct: 242 EFA 244
>gi|325289973|ref|YP_004266154.1| hypothetical protein Sgly_1856 [Syntrophobotulus glycolicus DSM
8271]
gi|324965374|gb|ADY56153.1| CBS domain containing protein [Syntrophobotulus glycolicus DSM
8271]
Length = 854
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 85 NTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPS 144
T H ++ L GG+VRD L K D+D+ ++ S FA ++ E +
Sbjct: 467 ETADHLGIQAYL--VGGFVRDLFLRKSSQDLDVVVEGDSNS-FANQLIEVVEVHKVVQHH 523
Query: 145 GFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDL 204
FG + HL D R E+Y +PT+ +ED +RRD
Sbjct: 524 QFGTVKITFRDGTHL------------DIAGSRWEEYDFPGALPTIEESNLKEDLFRRDF 571
Query: 205 TINSLFYNINTS---SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF 261
T+N++ +N + V D G G+ DL+ G+I +F++DP R++RA+RF R+
Sbjct: 572 TVNAMALCLNANRFGEVVDFYG-GLRDLQQGEI--RFLHNLSFIEDPTRMIRAVRFACRY 628
Query: 262 DFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMV 299
F + ++ + A + ++A + KIS+ER E+ L++
Sbjct: 629 HFKI-AKVTREAINTALQANVLLKISKERFTEELMLIL 665
>gi|283458980|ref|YP_003363629.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rothia mucilaginosa
DY-18]
gi|283135044|dbj|BAI65809.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rothia mucilaginosa
DY-18]
Length = 474
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 98/210 (46%), Gaps = 18/210 (8%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LL + D L E + ++ L GE D
Sbjct: 28 LYLVGGIVRDNLLDDGGHFTDFDLTTDATPEQSEQI---LRGWGE----------HTWDI 74
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
K T + + + + R E Y +SR PT+ FGT D RRD TIN++ +
Sbjct: 75 GKEYGTISARKNGVVYEVTTYRAEVYVSDSRKPTVEFGTDLSADLVRRDFTINAMAAALP 134
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ V DL G G+ DL+ G + TP P+ +F +DPLR++RA RF ARF+ + E+ +A
Sbjct: 135 SGEVVDLFG-GVEDLRAGVLRTPRSPEESFSEDPLRMMRAARFAARFNLEVAPEVFEAMR 193
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
A IS ERV E+ ++ + P
Sbjct: 194 E---MAGRIEIISAERVRDELVKLIEADYP 220
>gi|183985441|ref|YP_001853732.1| poly(a) polymerase PcnA [Mycobacterium marinum M]
gi|183178767|gb|ACC43877.1| poly(a) polymerase PcnA [Mycobacterium marinum M]
Length = 481
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 96 LRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPD 154
L + GG VRD LLG+ D+D D + V + A +T FG I
Sbjct: 39 LYLVGGSVRDALLGRLKSPDLDFTTD-ARPQQVQKIVRSWADAVWDTGIE-FGTI----- 91
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNI 213
+ D ++ R + Y + SR P +RFG E+D RRD T+N++ I
Sbjct: 92 --------GIAKNDYRLEITTFRADSYDQVSRHPEVRFGERLEDDLVRRDFTVNAMAVRI 143
Query: 214 NTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
S + G++ L+ + TP P +F DDPLR+LRA RF ++ F + ++
Sbjct: 144 TASGPGEFLDPLGGLSVLRDKVLDTPAAPSVSFGDDPLRMLRAARFVSQLGFAVAPRVRD 203
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A E A A+IS ERV E+D ++ G PV +
Sbjct: 204 AI---EEMAPQLARISAERVAAELDKLLLGENPVAGI 237
>gi|365872824|ref|ZP_09412360.1| Poly(A) polymerase PcnA [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|397680871|ref|YP_006522406.1| CCA-adding enzyme [Mycobacterium massiliense str. GO 06]
gi|418251607|ref|ZP_12877738.1| Poly(A) polymerase PcnA [Mycobacterium abscessus 47J26]
gi|420934119|ref|ZP_15397392.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense
1S-151-0930]
gi|420935248|ref|ZP_15398518.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense
1S-152-0914]
gi|420944378|ref|ZP_15407633.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense
1S-153-0915]
gi|420949559|ref|ZP_15412808.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense
1S-154-0310]
gi|420954483|ref|ZP_15417725.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense 2B-0626]
gi|420958658|ref|ZP_15421892.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense 2B-0107]
gi|420963233|ref|ZP_15426457.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense 2B-1231]
gi|420994593|ref|ZP_15457739.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense 2B-0307]
gi|420995552|ref|ZP_15458695.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense
2B-0912-R]
gi|421004901|ref|ZP_15468023.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense
2B-0912-S]
gi|421051951|ref|ZP_15514945.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|353448764|gb|EHB97165.1| Poly(A) polymerase PcnA [Mycobacterium abscessus 47J26]
gi|363992890|gb|EHM14117.1| Poly(A) polymerase PcnA [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|392132531|gb|EIU58276.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense
1S-151-0930]
gi|392145984|gb|EIU71708.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense
1S-153-0915]
gi|392146755|gb|EIU72476.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense
1S-152-0914]
gi|392150600|gb|EIU76313.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense
1S-154-0310]
gi|392153396|gb|EIU79103.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense 2B-0626]
gi|392180695|gb|EIV06347.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense 2B-0307]
gi|392191372|gb|EIV16997.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense
2B-0912-R]
gi|392193604|gb|EIV19228.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense
2B-0912-S]
gi|392240554|gb|EIV66047.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense CCUG
48898]
gi|392246146|gb|EIV71623.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense 2B-1231]
gi|392248384|gb|EIV73860.1| CCA tRNA nucleotidyltransferase [Mycobacterium massiliense 2B-0107]
gi|395459136|gb|AFN64799.1| CCA-adding enzyme [Mycobacterium massiliense str. GO 06]
Length = 478
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 29/220 (13%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LGK D+D D T AE + TG FG I
Sbjct: 39 LYLVGGSVRDAALGKPGIDLDFTTDARPEQVQNLVTGWAEAIWDTG----IAFGTIGVAR 94
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
+ ++ R + Y + SR P + FG + E D RRD T+N++
Sbjct: 95 RGQR-------------VEITTFRSDSYDQQSRNPEVVFGDSLEGDLVRRDFTVNAMAVK 141
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I + G+ L+ G + TP P+ +F DDPLR+LRA RF ++ F + +
Sbjct: 142 IGPDGPGEFCDPLNGLEALRAGVLDTPSAPEISFGDDPLRMLRAARFVSQLGFTVAPRVL 201
Query: 271 KA--AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+A A +D++ +I+ ERV TE+D ++ G PV +
Sbjct: 202 EALHAMADQL-----GRITAERVQTELDKLIVGAHPVAGI 236
>gi|345016432|ref|YP_004818786.1| polynucleotide adenylyltransferase [Streptomyces violaceusniger Tu
4113]
gi|344042781|gb|AEM88506.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Streptomyces violaceusniger Tu 4113]
Length = 496
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 28/265 (10%)
Query: 54 SEQEPPRPVVVQVRDKIELTDTETKIFSCLL-------NTLRHFNLETVLRVA--GGWVR 104
++ PP+P EL+ + + LL + RHF + R+A GG VR
Sbjct: 6 NDSRPPQPTN-------ELSQVQRRAVGELLRVSPVADDLARHFQ-QAGFRLALVGGSVR 57
Query: 105 DKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATM 164
D LLG+ D+D D E V + A + + FG + D + +
Sbjct: 58 DALLGRLGNDLDFTTD-ARPDEVLKIVRPWADAVWDVGIA-FGTVGCRKD----MAAGSG 111
Query: 165 KLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNINTSSVEDLTG 223
I+ R E Y SR P + +G + EED RRD T+N++ + D
Sbjct: 112 SDQSFQIEITTYRSEAYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMAVALPQKEFID-PH 170
Query: 224 RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALA 283
G+ DL + TP P+ +F DDPLR++RA RF A+ DF + E+ A S + +
Sbjct: 171 HGLEDLAARVLRTPGTPEESFSDDPLRMMRAARFAAQLDFEVAPEVVAAMTSMADRIDI- 229
Query: 284 AKISRERVGTEIDLMVSGNQPVKAM 308
+S ERV E++ ++ + P + +
Sbjct: 230 --VSAERVRDELNKLILADHPREGL 252
>gi|15603895|ref|NP_220410.1| poly(A) polymerase (pcnB) [Rickettsia prowazekii str. Madrid E]
gi|383486874|ref|YP_005404554.1| poly(A) polymerase [Rickettsia prowazekii str. GvV257]
gi|383487445|ref|YP_005405124.1| poly(A) polymerase [Rickettsia prowazekii str. Chernikova]
gi|383488291|ref|YP_005405969.1| poly(A) polymerase [Rickettsia prowazekii str. Katsinyian]
gi|383489136|ref|YP_005406813.1| poly(A) polymerase [Rickettsia prowazekii str. Dachau]
gi|383500113|ref|YP_005413473.1| poly(A) polymerase [Rickettsia prowazekii str. RpGvF24]
gi|386081847|ref|YP_005998424.1| Poly(A) polymerase [Rickettsia prowazekii str. Rp22]
gi|3860586|emb|CAA14487.1| POLY(A) POLYMERASE (pcnB) [Rickettsia prowazekii str. Madrid E]
gi|292571611|gb|ADE29526.1| Poly(A) polymerase [Rickettsia prowazekii str. Rp22]
gi|380757239|gb|AFE52476.1| poly(A) polymerase [Rickettsia prowazekii str. GvV257]
gi|380757810|gb|AFE53046.1| poly(A) polymerase [Rickettsia prowazekii str. RpGvF24]
gi|380760324|gb|AFE48846.1| poly(A) polymerase [Rickettsia prowazekii str. Chernikova]
gi|380761170|gb|AFE49691.1| poly(A) polymerase [Rickettsia prowazekii str. Katsinyian]
gi|380762859|gb|AFE51378.1| poly(A) polymerase [Rickettsia prowazekii str. Dachau]
Length = 387
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 109/231 (47%), Gaps = 25/231 (10%)
Query: 97 RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSG--FGVIPSNPD 154
R+ GG VRD LL KD YDIDIA N+M E ++ SA + P+G FG I + +
Sbjct: 29 RLIGGCVRDALLDKDTYDIDIA-TNLMPGEAINILS---SANIKIIPTGLKFGTITAILN 84
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNI 213
K E T++ +D N R + F EDA RRD TIN+L Y
Sbjct: 85 NEK-FEITTLR-------------KDIECNGRHAKVIFSKDFAEDAARRDFTINALSYCP 130
Query: 214 NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
+ + D G DL+ K+V +D LR+LR RF + + LD E KA
Sbjct: 131 FKNEIYDYFD-GFKDLQRAKVVFIGKAFNRIKEDYLRILRFFRFSSYYANQLDYESFKAC 189
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLP 324
D +K L +SRER+ +EID ++ + + + + + + ++F +
Sbjct: 190 --DTLKYGLKT-LSRERIKSEIDKIIVSKRATQILEAMFKIGILELIFSIQ 237
>gi|296118581|ref|ZP_06837159.1| tRNA adenylyltransferase [Corynebacterium ammoniagenes DSM 20306]
gi|295968480|gb|EFG81727.1| tRNA adenylyltransferase [Corynebacterium ammoniagenes DSM 20306]
Length = 478
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 121/261 (46%), Gaps = 29/261 (11%)
Query: 77 TKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
+ + S L++ N L + GG VRD LLG+ D+D D V E L
Sbjct: 23 SDLLSGLISEFARRN--HTLYLVGGSVRDALLGRLGNDLDFTTDAR-----PQVVHEILD 75
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TA 195
+ ET D T + I+ R + Y +SR P + FG T
Sbjct: 76 SWAET----------TWDTGIEFGTVSAVYKGQQIEITTFRADLYDGDSRNPEVTFGNTL 125
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
++D RRD +N++ + + G+ DL+ G + TP P+ +F DDPLR+LR
Sbjct: 126 DDDLIRRDFKVNAMAIELRADGTREFFDPMEGLKDLQAGIMDTPDAPELSFRDDPLRMLR 185
Query: 254 AIRFGARFDFILDEELKKAAA--SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
A RF ++ F + + +++A ++E++ +I+ ER+ E+D M+ G P + +
Sbjct: 186 AARFVSQLQFGVSDRVRQAMTDMAEEIR-----RITVERIQVEMDKMILGVAPWDGIDLL 240
Query: 312 CGLTLFWIVF-KLP-LQVEPE 330
L I+F ++P + +EP+
Sbjct: 241 VETGLAQIIFPEIPAMAMEPD 261
>gi|39996681|ref|NP_952632.1| adenosine-specific tRNA nucleotidyltransferase [Geobacter
sulfurreducens PCA]
gi|409912102|ref|YP_006890567.1| adenosine-specific tRNA nucleotidyltransferase [Geobacter
sulfurreducens KN400]
gi|39983562|gb|AAR34955.1| adenosine-specific tRNA nucleotidyltransferase [Geobacter
sulfurreducens PCA]
gi|298505692|gb|ADI84415.1| adenosine-specific tRNA nucleotidyltransferase [Geobacter
sulfurreducens KN400]
Length = 880
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 118/268 (44%), Gaps = 43/268 (16%)
Query: 59 PRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIA 118
PRP V +RD ++ D LE + GG+VRD LLG + DID++
Sbjct: 461 PRPTVAMLRDLGKVGD----------------ELELPVYAVGGFVRDLLLGAENDDIDVS 504
Query: 119 LDNMMGSEFATKVAEYLSATGET-APSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLR 177
++ G FA VA + ++ A G VI PD K +D + R
Sbjct: 505 VEGD-GILFAETVANRVGCRVKSHAKFGTAVI-VFPDGLK-------------VDVASTR 549
Query: 178 CEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIA--DLKHGKIV 235
E Y +PT+ + + D YRRD TIN+L +N L A DL+ I
Sbjct: 550 LEYYETPGALPTVERSSLKMDLYRRDFTINTLAVKLNAEGFGTLIDYFGAYRDLQEKTI- 608
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILD---EELKKAAASDEVKAALAAKISRERVG 292
+ +F++DP RV RAIRF R F + E L K A VK K+ R+
Sbjct: 609 -RVLHNLSFVEDPTRVFRAIRFEQRLGFPISRHTENLIKNA----VKMGFLDKLGGRRLL 663
Query: 293 TEIDLMVSGNQPVKAMTHICGLTLFWIV 320
E+ L++ +PVKA+ + GL L +
Sbjct: 664 NELVLILREREPVKAILRMSGLGLLRFI 691
>gi|169632007|ref|YP_001705656.1| Poly(A) polymerase PcnA [Mycobacterium abscessus ATCC 19977]
gi|419714330|ref|ZP_14241747.1| Poly(A) polymerase PcnA [Mycobacterium abscessus M94]
gi|420866424|ref|ZP_15329813.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 4S-0303]
gi|420871215|ref|ZP_15334597.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus
4S-0726-RA]
gi|420875666|ref|ZP_15339042.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus
4S-0726-RB]
gi|420912610|ref|ZP_15375922.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 6G-0125-R]
gi|420919064|ref|ZP_15382367.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 6G-0125-S]
gi|420924234|ref|ZP_15387530.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 6G-0728-S]
gi|420929893|ref|ZP_15393172.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 6G-1108]
gi|420969587|ref|ZP_15432790.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 3A-0810-R]
gi|420980231|ref|ZP_15443408.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 6G-0212]
gi|420985616|ref|ZP_15448783.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 6G-0728-R]
gi|420989138|ref|ZP_15452294.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 4S-0206]
gi|421009147|ref|ZP_15472256.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 3A-0119-R]
gi|421015790|ref|ZP_15478864.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 3A-0122-R]
gi|421020881|ref|ZP_15483937.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 3A-0122-S]
gi|421025579|ref|ZP_15488622.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 3A-0731]
gi|421031675|ref|ZP_15494705.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 3A-0930-R]
gi|421036620|ref|ZP_15499637.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 3A-0930-S]
gi|421041894|ref|ZP_15504902.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 4S-0116-R]
gi|421046015|ref|ZP_15509015.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 4S-0116-S]
gi|169243974|emb|CAM65002.1| Poly(A) polymerase PcnA [Mycobacterium abscessus]
gi|382945609|gb|EIC69902.1| Poly(A) polymerase PcnA [Mycobacterium abscessus M94]
gi|392065140|gb|EIT90989.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 4S-0303]
gi|392067141|gb|EIT92989.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus
4S-0726-RB]
gi|392070685|gb|EIT96532.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus
4S-0726-RA]
gi|392111955|gb|EIU37725.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 6G-0125-S]
gi|392114604|gb|EIU40373.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 6G-0125-R]
gi|392126881|gb|EIU52632.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 6G-1108]
gi|392128887|gb|EIU54637.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 6G-0728-S]
gi|392164509|gb|EIU90198.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 6G-0212]
gi|392170612|gb|EIU96290.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 6G-0728-R]
gi|392183417|gb|EIV09068.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 4S-0206]
gi|392194753|gb|EIV20372.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 3A-0119-R]
gi|392196425|gb|EIV22043.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 3A-0122-R]
gi|392206604|gb|EIV32187.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 3A-0122-S]
gi|392209102|gb|EIV34674.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 3A-0731]
gi|392219557|gb|EIV45082.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 3A-0930-R]
gi|392220472|gb|EIV45996.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 3A-0930-S]
gi|392222822|gb|EIV48345.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 4S-0116-R]
gi|392235468|gb|EIV60966.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 4S-0116-S]
gi|392245243|gb|EIV70721.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 3A-0810-R]
Length = 478
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 29/220 (13%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LGK D+D D T AE + TG FG I
Sbjct: 39 LYLVGGSVRDAALGKPGIDLDFTTDARPEQVQNLVTGWAEAIWDTG----IAFGTIGVAR 94
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
+ ++ R + Y + SR P + FG + E D RRD T+N++
Sbjct: 95 RGQR-------------VEITTFRSDSYDQQSRNPEVVFGDSLEGDLVRRDFTVNAMAVK 141
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I + G+ L+ G + TP P+ +F DDPLR+LRA RF ++ F + +
Sbjct: 142 IGPDGPGEFCDPLNGLEALRAGVLDTPSAPEISFGDDPLRMLRAARFVSQLGFTVAPRVL 201
Query: 271 KA--AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+A A +D++ +I+ ERV TE+D ++ G PV +
Sbjct: 202 EALHAMADQL-----GRITAERVQTELDKLIVGAHPVAGI 236
>gi|441510860|ref|ZP_20992760.1| putative tRNA nucleotidyltransferase [Gordonia aichiensis NBRC
108223]
gi|441445008|dbj|GAC50721.1| putative tRNA nucleotidyltransferase [Gordonia aichiensis NBRC
108223]
Length = 487
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D E + + A +T FG I
Sbjct: 46 LYLVGGSVRDAVLGRLGNDLDFTTD-ARPEEITRLLTGWADAIWDTGIE-FGTI------ 97
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ + D+ I+ R + Y R P + FG + E D RRD T+N++ I
Sbjct: 98 -------SARKGDVMIEITTFRADQYDRVGRNPEVTFGDSLEADLVRRDFTMNAMAVAIG 150
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + G+ L G I TP P+ +F DDPLR+LRA+RF ++ F L + A
Sbjct: 151 PTGPAEFHDPLDGMTALLAGIIDTPATPQESFNDDPLRMLRAVRFVSQLGFRLAPRVFDA 210
Query: 273 AA--SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+DE+ +I+ ERV TE+D ++ G P++A+
Sbjct: 211 ITEMADEIN-----RITAERVRTELDKLILGEHPIEAI 243
>gi|262204638|ref|YP_003275846.1| tRNA adenylyltransferase [Gordonia bronchialis DSM 43247]
gi|262087985|gb|ACY23953.1| tRNA adenylyltransferase [Gordonia bronchialis DSM 43247]
Length = 489
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D + + L G A + + D
Sbjct: 49 LYLVGGSVRDAILGRLGNDLDFTTD--------ARPEQILELVGGWADAIW-------DV 93
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
T ++ + I+ R + Y R P + FG T + D RRD TIN++ ++
Sbjct: 94 GIEFGTVGVRKGEAMIEITTFRADAYDRVGRNPEVTFGDTLDGDLVRRDFTINAMAVRVD 153
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+DL G+ L G I TP P+ +F DDPLR+LRA+RF ++ F L + A
Sbjct: 154 ADGAQDLLDPLDGVTALLAGVIDTPAAPEDSFGDDPLRMLRAVRFISQLGFRLAPRVADA 213
Query: 273 AA--SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+D+++ +I+ ERV E+D ++ G P+ A+
Sbjct: 214 ITRMADQIE-----RITAERVRMELDKLICGEYPIDAI 246
>gi|376249629|ref|YP_005141573.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae HC04]
gi|372116197|gb|AEX82255.1| tRNA nucleotidyltransferase [Corynebacterium diphtheriae HC04]
Length = 495
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LL + +D+D D + + EY +T FG + + D
Sbjct: 57 LYLVGGSVRDALLDELGHDLDFTTD-ARPDVVSAILEEYAPVVWDTGIE-FGTVSAEKDG 114
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNI- 213
+ I+ R + Y R P ++FG T E D RRD T+N++ I
Sbjct: 115 QQ-------------IEITTFRSDVYDGQFRNPEVQFGDTLEGDLIRRDFTVNAMAMEIL 161
Query: 214 --NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
+ D G G+ DL G + TP P+ +F DDPLR+LRA RF ++ F L ++
Sbjct: 162 PDGSMQFHDPVG-GMNDLAAGLLDTPAVPQQSFNDDPLRMLRAARFVSQLGFDLAPRVRH 220
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
A A +I+ ERV E+D M+ G P + + L I++
Sbjct: 221 AMTE---MADQITRITAERVQVELDKMICGKAPWDGIDVMVDTGLADIIY 267
>gi|390556734|ref|ZP_10243144.1| Polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Nitrolancetus hollandicus Lb]
gi|390174699|emb|CCF82430.1| Polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Nitrolancetus hollandicus Lb]
Length = 462
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALD-NMMGSEFATKVAEYLSATGETAPSGFGVIPSNPD 154
L + GG VRD LLG+ D+D A M +E A + A+ S T FG I
Sbjct: 29 LYLVGGSVRDLLLGRPVKDLDFATSAEPMITEAAGRAADATSVY--TIGEKFGTI----- 81
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGT-AEEDAYRRDLTINSLFYNI 213
DL ++ R E Y +R P ++ G D RRD T+N++
Sbjct: 82 --------GFVFDDLNVEITTFREEHYPTATRHPAVQHGVDIVADLSRRDFTVNAIAIEA 133
Query: 214 NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
T + D +G+ADLK I P+A F +DPLR+LRA+RF A DF + E
Sbjct: 134 RTGEIIDRF-QGLADLKRRIIRAVGEPEARFREDPLRILRAVRFAAELDFQIHPE---TL 189
Query: 274 ASDEVKAALAAKISRERVGTEIDLMV 299
A+ A +ISRER+ E++ ++
Sbjct: 190 AAMRTMAPELERISRERIAAELNRLL 215
>gi|328955695|ref|YP_004373028.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Coriobacterium glomerans PW2]
gi|328456019|gb|AEB07213.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Coriobacterium glomerans PW2]
Length = 492
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 20/212 (9%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GGWVRD LLG + +DIDI S A A + ET S FG I + + +
Sbjct: 48 GGWVRDALLGSESHDIDICCSGSWQSNAAALRAAGIEVL-ETGVS-FGGITAVIAHDR-V 104
Query: 160 ETATMKLYDLWIDFVN-LRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSV 218
E + ++ ++D + +R E R G+ E+D RRDLT+N++ ++ +
Sbjct: 105 EVTSYRIDGDYVDGRHPVRIE-----------RAGSIEDDLARRDLTVNAMAWHPERGLI 153
Query: 219 EDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEV 278
+ GRG DL I + F +D LR+LRA+RF DF +D E +A
Sbjct: 154 DLFDGRG--DLARRVIRAVGIARERFEEDALRMLRAVRFACSLDFKMDFETDEAI---RA 208
Query: 279 KAALAAKISRERVGTEIDLMVSGNQPVKAMTH 310
A L IS +RVG+E+D +++ + A+ H
Sbjct: 209 CAPLLKAISAQRVGSELDRILASGRGGDALAH 240
>gi|408825572|ref|ZP_11210462.1| RNA nucleotidyltransferase [Streptomyces somaliensis DSM 40738]
Length = 465
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + V + A E + FG + +
Sbjct: 30 LALVGGSVRDALLGRLGNDLDFTTD-ARPEDVLKIVRPWAEAVWEVGIA-FGTVGAQKGG 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 88 YQ-------------IEVTTYRSEAYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMAVALP 134
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+A+F DDPLR++RA RF A+ DF + E+ A
Sbjct: 135 EKEFIDPHG-GLEDLAARVLRTPGTPEASFSDDPLRMMRAARFAAQLDFEVVPEVVTAMG 193
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
AA +S ERV E++ ++ P K +
Sbjct: 194 E---MAARLGIVSMERVRDELNKLILSAHPRKGLA 225
>gi|414583456|ref|ZP_11440596.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-1215]
gi|418423143|ref|ZP_12996312.1| Poly(A) polymerase PcnA [Mycobacterium abscessus subsp. bolletii
BD]
gi|420881343|ref|ZP_15344710.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-0304]
gi|420886360|ref|ZP_15349720.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-0421]
gi|420887011|ref|ZP_15350369.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-0422]
gi|420897595|ref|ZP_15360934.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-0708]
gi|420899861|ref|ZP_15363192.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-0817]
gi|420908086|ref|ZP_15371404.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-1212]
gi|420974976|ref|ZP_15438166.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-0921]
gi|363993118|gb|EHM14344.1| Poly(A) polymerase PcnA [Mycobacterium abscessus subsp. bolletii
BD]
gi|392082123|gb|EIU07949.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-0421]
gi|392086252|gb|EIU12077.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-0304]
gi|392093725|gb|EIU19521.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-0422]
gi|392096907|gb|EIU22702.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-0708]
gi|392097222|gb|EIU23016.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-0817]
gi|392105990|gb|EIU31776.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-1212]
gi|392118608|gb|EIU44376.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-1215]
gi|392160094|gb|EIU85787.1| CCA tRNA nucleotidyltransferase [Mycobacterium abscessus 5S-0921]
Length = 478
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LGK D+D D + T AE + TG FG +
Sbjct: 39 LYLVGGSVRDAALGKPGIDLDFTTDARPEQVQKLVTGWAEAIWDTG----IAFGTVGVAR 94
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
+ ++ R + Y + SR P + FG + E D RRD T+N++
Sbjct: 95 RGQR-------------VEITTFRSDSYDQQSRNPEVVFGDSLEGDLVRRDFTVNAMAVK 141
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I + G+ L+ G + TP P+ +F DDPLR+LRA RF ++ F + +
Sbjct: 142 IGPDGPGEFCDPLNGLEALRAGVLDTPSAPEISFGDDPLRMLRAARFVSQLGFTVAPRVL 201
Query: 271 KA--AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+A A +D++ +I+ ERV TE+D ++ G PV +
Sbjct: 202 EALHAMADQL-----GRITAERVQTELDKLIVGAHPVAGI 236
>gi|407455762|ref|YP_006734653.1| poly A polymerase head domain-containing protein [Chlamydia
psittaci GR9]
gi|407458500|ref|YP_006736805.1| poly A polymerase head domain-containing protein [Chlamydia
psittaci WS/RT/E30]
gi|405782305|gb|AFS21054.1| poly A polymerase head domain protein [Chlamydia psittaci GR9]
gi|405785209|gb|AFS23955.1| poly A polymerase head domain protein [Chlamydia psittaci
WS/RT/E30]
Length = 410
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 28/236 (11%)
Query: 100 GGWVRDKLLGKDCYDIDIALDN---MMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
GG VRD L+GK +IDIA ++ + F +A L A FG+I + +
Sbjct: 27 GGCVRDMLMGKPIEEIDIATSAPPVIVSTIFPDTLA--LGA-------AFGIIVVK-ENN 76
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
+ E AT + E+Y + + F + +EDA RRD TIN ++Y+
Sbjct: 77 RLFEVATFR-----------SDENYQDGRHPERVIFSSMKEDALRRDFTINGMYYDPFEE 125
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
+ DL G DL+ I PK F +D LR+LRAIRF + F LD ++A +
Sbjct: 126 KLFDLV-EGRRDLEKRVIRAIGHPKLRFSEDKLRILRAIRFSSSLGFTLDPATERAIIKE 184
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVL 332
+L +S ER+ E+ M+ N P +A++ + L + ++F + P +L
Sbjct: 185 --APSLVCSLSPERIWQELKKMLKKN-PYEALSLLIRLKIITVIFPELRDIPPSLL 237
>gi|358461589|ref|ZP_09171748.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Frankia sp. CN3]
gi|357073082|gb|EHI82599.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Frankia sp. CN3]
Length = 533
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 101/230 (43%), Gaps = 34/230 (14%)
Query: 95 VLRVAGGWVRDKLLGK--------DCYDIDIALDNMMGSEFATKVAEYLSATGET---AP 143
L + GG VRD LLG+ D+D D +V E A E A
Sbjct: 57 ALHLVGGTVRDALLGRLTGVGGTSGAPDLDFTTDAR-----PERVLEITRAWAEATWEAG 111
Query: 144 SGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRR 202
FG T + ++ R E+Y +SR PT+ +G + E D RR
Sbjct: 112 IAFG-------------TVGLARRGARLEVTTYRAENYDRDSRNPTVSYGDSLEGDLVRR 158
Query: 203 DLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFD 262
D T+N++ ++ DL G G+ADL + TP PP+ + DDPLR+LRAIRF A+
Sbjct: 159 DFTVNAMAVSVPDHQFVDLFG-GMADLSRAVLRTPGPPEVSLDDDPLRILRAIRFEAQLG 217
Query: 263 FILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
+ EL A + +A +S ER+ E+ +V PV + +
Sbjct: 218 LVPTPELVDAMTA---RAERLRIVSPERIRDELRKLVVSADPVGGLRRLV 264
>gi|148274148|ref|YP_001223709.1| putative RNA nucleotidyltransferase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147832078|emb|CAN03051.1| putative RNA nucleotidyltransferase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 476
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LG+ D+D+ D ++ E + + ++ D
Sbjct: 34 LALVGGPVRDAFLGRAATDLDLTTDAR-----PDRILEIVKPVAD----------AHWDI 78
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ T ++ ++ R + Y SR P + FG++ EED RRD T+N+L +
Sbjct: 79 GRAFGTIGARVKGEQVEITTYRTDQYDGVSRKPEVEFGSSLEEDLVRRDFTVNALAVRLP 138
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ D +G GI DL + TP+ P+ +F DDPLR++RA+RF ++ F LD+ A A
Sbjct: 139 QVVLVDPSG-GIDDLLAQVLRTPVAPEVSFGDDPLRMMRAVRFASQLGFRLDD---AALA 194
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ A IS ERV E+ ++ +P
Sbjct: 195 AIRDMAPRILDISVERVSDELSKLLRTPEP 224
>gi|344942132|ref|ZP_08781420.1| poly(A) polymerase [Methylobacter tundripaludum SV96]
gi|344263324|gb|EGW23595.1| poly(A) polymerase [Methylobacter tundripaludum SV96]
Length = 467
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 121/298 (40%), Gaps = 61/298 (20%)
Query: 48 RCKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETV-LRVAGGWVRDK 106
R +A+ + P V++ + E + +I L L E + GG VRD
Sbjct: 18 RVEASARNEAEPVDARVKIYSRAEHNISRAQISEHALKVLYRLQKEGFDAYLVGGCVRDL 77
Query: 107 LLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ----------- 155
LLG++ D D+ V ++PDQ
Sbjct: 78 LLGREPKDFDV------------------------------VTNADPDQVRKVFRNCRLI 107
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR---------FGTAEEDAYRRDLTI 206
+ A + I+ R +N + + +GT EED +RRD T+
Sbjct: 108 GRRFRLAHVHFGREIIEVATFRGAGEEQNDKQVLNKEGRLLRDNVYGTIEEDVWRRDFTV 167
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
N+L+YNI SV D G G+AD K G + P+ F +DP+R+LRA+RF + F LD
Sbjct: 168 NALYYNIKDFSVVDYVG-GMADHKTGTLKLIGDPEMRFREDPVRMLRAVRFAVKLGFKLD 226
Query: 267 EELKKAAASDEVKAALAAKISRERVGTE-IDLMVSGN--QPVKAMTHICGLTLFWIVF 321
+KA +D L A I R+ E + L +SG Q + + H LF ++F
Sbjct: 227 SACEKAIHND---VQLLASIPSARLYDEALKLFLSGYALQTFEMLRH---YGLFQVLF 278
>gi|54027630|ref|YP_121872.1| tRNA nucleotidyltransferase [Nocardia farcinica IFM 10152]
gi|54019138|dbj|BAD60508.1| putative tRNA nucleotidyltransferase [Nocardia farcinica IFM 10152]
Length = 485
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGS--EFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD +LG+ D+D D E A+++ TG A FG + S
Sbjct: 45 LYLVGGSVRDAVLGRLGTDLDFTTDARPEQVLEIMRGWADHVWDTGGLA---FGTV-SAA 100
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYN 212
+ LE T R + Y SR P + FG T E D RRD T+N++
Sbjct: 101 KAGQQLEITT------------FRSDTYDRVSRNPEVTFGDTLEGDLVRRDFTVNAMAVR 148
Query: 213 INT-SSVE--DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEEL 269
I S+E D G G+ L G + TP P+ +F DDPLR+LRA RF ++ F L +
Sbjct: 149 IAADGSLEFVDPLG-GMDALLAGVLDTPASPEDSFDDDPLRMLRAARFVSQLGFELAPRV 207
Query: 270 KKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHIC 312
+ A A +I+ ERV E+D +++G+ P+ + +C
Sbjct: 208 RAAIGR---MAEQIDRITAERVRVELDKLIAGDHPIDGIDIMC 247
>gi|377564853|ref|ZP_09794164.1| putative tRNA nucleotidyltransferase [Gordonia sputi NBRC 100414]
gi|377528007|dbj|GAB39329.1| putative tRNA nucleotidyltransferase [Gordonia sputi NBRC 100414]
Length = 487
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 25/218 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D +E + ++ A +T FG I
Sbjct: 46 LYLVGGSVRDAVLGRLGNDLDFTTD-ARPAEITRLLTGWVDAIWDTGIE-FGTI------ 97
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ + D+ I+ R + Y R P + FG + E D RRD T+N++ I
Sbjct: 98 -------SARKGDVMIEITTFRADQYDRVGRNPEVTFGDSLEADLVRRDFTMNAMAVAIG 150
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + G+ L G I TP P+ +F DDPLR+LRA+RF ++ F L + A
Sbjct: 151 PNGPAEFHDPLDGMTALLAGIIDTPATPQESFNDDPLRMLRAVRFVSQLGFRLAPRVFDA 210
Query: 273 AA--SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+DE+ +I+ ERV E+D ++ G P++A+
Sbjct: 211 ITEMADEIN-----RITAERVHAELDKLILGEHPIEAI 243
>gi|238761613|ref|ZP_04622588.1| Poly(A) polymerase [Yersinia kristensenii ATCC 33638]
gi|238700127|gb|EEP92869.1| Poly(A) polymerase [Yersinia kristensenii ATCC 33638]
Length = 483
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 103/237 (43%), Gaps = 30/237 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET---APSGFGVIPSNPD 154
+ GG VRD LLGK D DI E K+ G A FG
Sbjct: 79 LVGGGVRDLLLGKKPKDFDITTSAT--PEQVRKLFRNCRLVGRRFRLAHVMFG------- 129
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR--------FGTAEEDAYRRDLTI 206
+ +E AT + + + ED +NS FGT E+DA RRD TI
Sbjct: 130 -PEIIEVATFRGH-----HEQQQAEDSDKNSSQQAQNGMLLRDNIFGTIEDDAQRRDFTI 183
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
NSL+Y I+ ++ D TG G+ DLK G I P+ + +DP+R+LRA+RF A+ D +
Sbjct: 184 NSLYYGISDFALRDYTG-GLRDLKEGIIRLIGSPETRYREDPVRMLRAVRFAAKLDMTIS 242
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
E A A+L +I R+ E ++ K +C LF +F L
Sbjct: 243 PE---TAEPIPRLASLLHEIPPARLFEESLKLLQSGYGYKTYLKLCEYQLFQPLFPL 296
>gi|343928710|ref|ZP_08768155.1| putative tRNA nucleotidyltransferase [Gordonia alkanivorans NBRC
16433]
gi|343761459|dbj|GAA15081.1| putative tRNA nucleotidyltransferase [Gordonia alkanivorans NBRC
16433]
Length = 480
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D +V+ L G + D
Sbjct: 39 LYLVGGSVRDAVLGRLGNDLDFTTDAR-----PEQVSRLLK----------GWADAFWDV 83
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
T ++ + I+ R + Y + SR P + FG T ++D RRD T+N++ I
Sbjct: 84 GIEFGTVGIRKGEHQIEITTFRADSYDQVSRNPEVTFGETLDDDLIRRDFTVNAMAVRIG 143
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ ED G++ L G I TP P+ +F DDPLR+LRA+RF ++ F L + +A
Sbjct: 144 ATGAEDFCDPLDGMSALLAGMIDTPATPEQSFGDDPLRMLRAVRFISQLGFGLAPRVWQA 203
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
E+ + +I+ ERV E+D ++ G P+ A+
Sbjct: 204 IT--EMNGEI-DRITAERVRAELDKLICGEFPLDAI 236
>gi|419710388|ref|ZP_14237854.1| Poly(A) polymerase PcnA [Mycobacterium abscessus M93]
gi|382941220|gb|EIC65540.1| Poly(A) polymerase PcnA [Mycobacterium abscessus M93]
Length = 478
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 29/220 (13%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LGK D+D D T AE + TG FG I
Sbjct: 39 LYLVGGSVRDAALGKPGIDLDFTTDARPEQVQNLVTGWAEAIWDTG----IAFGTI---- 90
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
+ ++ R + Y + SR P + FG + E D RRD T+N++
Sbjct: 91 ---------GVARIGQRVEITTFRSDSYDQQSRNPEVVFGDSLEGDLVRRDFTVNAMAVK 141
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I + G+ L+ G + TP P+ +F DDPLR+LRA RF ++ F + +
Sbjct: 142 IGPDGPGEFCDPLNGLEALRAGVLDTPSAPEISFGDDPLRMLRAARFVSQLGFTVAPRVL 201
Query: 271 KA--AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+A A +D++ +I+ ERV TE+D ++ G PV +
Sbjct: 202 EALHAMADQL-----GRITAERVQTELDKLIVGAHPVAGI 236
>gi|302543982|ref|ZP_07296324.1| tRNA adenylyltransferase [Streptomyces hygroscopicus ATCC 53653]
gi|302461600|gb|EFL24693.1| tRNA adenylyltransferase [Streptomyces himastatinicus ATCC 53653]
Length = 477
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D E V + A E + FG + +
Sbjct: 30 LALVGGSVRDALLGRLGNDLDFTTD-ARPDEVLKIVRPWADAVWEVGIA-FGTVGCQKEG 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ T + + I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 88 PG--DNGTHQSFQ--IEITTYRSEAYDRTSRKPEVSYGASIEEDLVRRDFTVNAMAVALP 143
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G+ DL + TP P+ +F DDPLR++RA RF ++ DF + E+ A
Sbjct: 144 QKEFID-PHNGLEDLAARVLRTPGTPQESFSDDPLRMMRAARFASQLDFEVAPEVVAAM- 201
Query: 275 SDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAM 308
A+A +I S ERV E++ +V G P K +
Sbjct: 202 -----KAMAGRIDIVSAERVRDELNKLVLGAYPRKGL 233
>gi|15605911|ref|NP_213288.1| poly A polymerase [Aquifex aeolicus VF5]
gi|2983086|gb|AAC06692.1| poly A polymerase [Aquifex aeolicus VF5]
Length = 824
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 101/206 (49%), Gaps = 28/206 (13%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLGK+ +D+D ++ E A ++A P FG
Sbjct: 456 IVGGVVRDILLGKEVWDVDFVVEGN-AIELAKELARRHGVNVHPFPE-FG---------- 503
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT-- 215
TA +K+ L ++F R E Y P + + +ED RRD TIN++ ++N
Sbjct: 504 ---TAHLKIGKLKLEFATARRETYPRPGAYPKVEPASLKEDLIRRDFTINAMAISVNLED 560
Query: 216 -SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD---EELKK 271
++ D G G+ DLK K++ L P +F++DP+R+LRA+RF R +F L E+L K
Sbjct: 561 YGTLIDYFG-GLRDLKD-KVIRVLHP-VSFIEDPVRILRALRFAGRLNFKLSRSTEKLLK 617
Query: 272 AAASDEVKAALAAKISRERVGTEIDL 297
A V L + R R+ EI L
Sbjct: 618 QA----VNLGLLKEAPRGRLINEIKL 639
>gi|383637362|ref|ZP_09950768.1| RNA nucleotidyltransferase [Streptomyces chartreusis NRRL 12338]
Length = 475
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 18/218 (8%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + V + A E + FG + + D
Sbjct: 30 LALVGGSVRDALLGRLGNDLDFTTD-ARPQDVLKIVRPWADAVWEVGIA-FGTVGAQKD- 86
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ A + I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 87 -ARVGDADRRFQ---IEVTTYRSEAYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMAVALP 142
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+ +F DDPLR++RA RF A+ DF + E+ A
Sbjct: 143 EKEFIDPHG-GLQDLASRVLRTPGTPEESFSDDPLRMMRAARFAAQLDFEVAPEVVAAM- 200
Query: 275 SDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAMT 309
A+A +I S ERV E++ ++ P K ++
Sbjct: 201 -----NAMAGRIEIVSAERVRDELNKLILSPHPRKGLS 233
>gi|297569506|ref|YP_003690850.1| polynucleotide adenylyltransferase [Desulfurivibrio alkaliphilus
AHT2]
gi|296925421|gb|ADH86231.1| Polynucleotide adenylyltransferase [Desulfurivibrio alkaliphilus
AHT2]
Length = 466
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 105/231 (45%), Gaps = 24/231 (10%)
Query: 47 LRCKATMSEQEP-PRPVVVQVRDK-IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVR 104
LR MSE P P V+ + I D + + +++ LR L GG VR
Sbjct: 7 LRDPLPMSEDSSLPEPRVIPRSEHCISRADIDREALK-VMHRLRDEGFRAYL--VGGGVR 63
Query: 105 DKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATM 164
D LLGK D DI+ D G K+ G F ++ K +E AT
Sbjct: 64 DLLLGKKPKDFDISTDARPGQ--LRKIFRNSRIIGRR----FRLVQVFFHGGKIIEVATF 117
Query: 165 KL---YDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDL 221
+ +DL + D + FG EDA+RRDLTIN+LFY I SV D
Sbjct: 118 RCRSEFDLNGGEIETLASDNT---------FGDPAEDAFRRDLTINALFYEIENFSVIDY 168
Query: 222 TGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
TG G+ DL+ G + P + DP+R+LRAIR AR F+++EE +A
Sbjct: 169 TG-GVEDLRLGLVRLVGDPDRRLIRDPVRMLRAIRHAARSGFVIEEETWQA 218
>gi|291303867|ref|YP_003515145.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Stackebrandtia nassauensis DSM 44728]
gi|290573087|gb|ADD46052.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Stackebrandtia nassauensis DSM 44728]
Length = 473
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +L +D D+D A E + E S+T T FG I +
Sbjct: 29 LHLVGGPVRDAILRRDTVDLDFATSAH--PEVTQAILEEHSSTIWTTGREFGTIGA---- 82
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
++ R + Y SR P + +G +D RRD TIN++ ++
Sbjct: 83 ---------MFRGHRVEVTTFRADTYDGVSRNPQVAYGDNLTDDLRRRDFTINAMAVSVP 133
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL I TP P+ +F DDPLR++RA RF ++ F +D +K A
Sbjct: 134 GHEFSDPFG-GLTDLAQQTIRTPGTPEDSFADDPLRMMRAARFTSQLGFHVDPAVKTAMT 192
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+ A +IS ERV E ++ G PV +
Sbjct: 193 N---MARDIERISAERVRDEFVKLMGGTDPVPGL 223
>gi|269215861|ref|ZP_06159715.1| polyA polymerase family protein [Slackia exigua ATCC 700122]
gi|269130811|gb|EEZ61887.1| polyA polymerase family protein [Slackia exigua ATCC 700122]
Length = 455
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 120/277 (43%), Gaps = 32/277 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L G D +D+D+A A + +G V +
Sbjct: 29 VVGGYVRDALAGDDAHDVDVATS-----------ARWQDVARVCVDAGMRVYETGTAHG- 76
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIP-TMRF-GTAEEDAYRRDLTINSLFYNINT 215
T ++ ++ R + E++R P ++ F + E D RRD T N+L Y+
Sbjct: 77 ---TVSVNTGRRIVEVTTYRIDGPYEDARHPASVSFVDSIELDLARRDFTFNALAYHPER 133
Query: 216 SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
++ G +DLK G I T P F +DPLR+LRA+RF +RF F +D+ + A
Sbjct: 134 GLLDPYDG--CSDLKGGIIRTVGDPMKRFREDPLRILRAVRFASRFGFAVDDRTESAM-- 189
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGC 335
A L ++ ER+ E M+ G+ H C + WI E ++G
Sbjct: 190 -RRLAPLIGGVAAERIENEFSRMLLGD-------HACNAIIEWIDVIGVFIPEALPMKGF 241
Query: 336 EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALF 372
+ ++ +D+ + + RR+++YAA F
Sbjct: 242 DQRTPYHI---YDVLEHSAHAVGAAPARRITRYAAFF 275
>gi|170783388|ref|YP_001711722.1| RNA nucleotidyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157958|emb|CAQ03168.1| putative RNA nucleotidyltransferase [Clavibacter michiganensis
subsp. sepedonicus]
Length = 455
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LG+ D+D+ D ++ E + + ++ D
Sbjct: 13 LALVGGPVRDAFLGRAATDLDLTTDAR-----PDRILEIVKPVAD----------AHWDI 57
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ T ++ ++ R + Y SR P + FG++ EED RRD T+N+L +
Sbjct: 58 GRAFGTIGARVKGEQVEITTYRTDQYDGVSRKPEVEFGSSLEEDLVRRDFTVNALAVRLP 117
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ D +G GI DL + TP+ P+ +F DDPLR++RA+RF ++ F LD+ A A
Sbjct: 118 QVVLVDPSG-GIDDLLAQVLRTPVAPEVSFGDDPLRMMRAVRFASQLGFRLDD---AALA 173
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ A IS ERV E+ ++ +P
Sbjct: 174 AIHDMAPRILDISVERVSDELSKLLRTPEP 203
>gi|384914618|ref|ZP_10015402.1| tRNA nucleotidyltransferase/poly(A) polymerase [Methylacidiphilum
fumariolicum SolV]
gi|384527503|emb|CCG91270.1| tRNA nucleotidyltransferase/poly(A) polymerase [Methylacidiphilum
fumariolicum SolV]
Length = 441
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 99 AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS--ATGETAPSGFGVIPSNPDQS 156
AGG VRD LL K+ +DIDIA S +V + ATG FGV+ +S
Sbjct: 22 AGGCVRDILLEKEPHDIDIAT-----SATPEEVQQLFKDKATGLIG-KAFGVVRV---RS 72
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINT 215
H + + R + SE R P +RF T +EDA RRD TIN +FY+
Sbjct: 73 GHH----------FFEVATFRTDIGSEGGRWPAAVRFSTPKEDALRRDFTINGIFYDPIA 122
Query: 216 SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+ D +G D++ I PK F +D LR+LRAIRF + F ++E A
Sbjct: 123 DQIIDYV-KGTEDIEKKIIRAIGDPKKRFEEDHLRMLRAIRFAVQLSFRIEENTWNAIRQ 181
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A IS ER+ E+D + P + +
Sbjct: 182 S---AQAILNISAERIREELDKIFCSPDPARGL 211
>gi|116672699|ref|YP_833632.1| metal dependent phosphohydrolase [Arthrobacter sp. FB24]
gi|116612808|gb|ABK05532.1| metal dependent phosphohydrolase [Arthrobacter sp. FB24]
Length = 496
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA--TKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LG+ D+D D A K A+ G+ FG I
Sbjct: 35 LSLVGGPVRDLFLGRRSPDLDFTTDATPDQTLALIRKWADNFWEIGKA----FGTI---- 86
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
M+ I+ R E Y SR P + FG++ +D RRD TIN++
Sbjct: 87 ---------GMRKSGFQIEITTYRAEAYDPESRKPMVAFGSSLTDDLLRRDFTINAMALR 137
Query: 213 INTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + + D G G+ DL + TP P+ +F DDPLR++RA RF A+ + ++K A
Sbjct: 138 LPSMELIDPFG-GVRDLHASVLATPGAPETSFSDDPLRMMRAARFAAQLGVAVRGDVKHA 196
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ + ++ IS ERV E+ ++ G P
Sbjct: 197 MSQMAERISI---ISAERVREELVKLICGAHP 225
>gi|402829674|ref|ZP_10878548.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Slackia sp. CM382]
gi|402283670|gb|EJU32181.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Slackia sp. CM382]
Length = 455
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 120/277 (43%), Gaps = 32/277 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD L G D +D+D+A A + +G V +
Sbjct: 29 VVGGYVRDALAGDDAHDVDVATS-----------ARWQDVARVCVDAGMRVYETGTAHG- 76
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIP-TMRF-GTAEEDAYRRDLTINSLFYNINT 215
T ++ ++ R + E++R P ++ F + E D RRD T N+L Y+
Sbjct: 77 ---TVSVNTGRRIVEVTTYRIDGPYEDARHPASVSFVDSIELDLARRDFTFNALAYHPER 133
Query: 216 SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
++ G +DLK G I T P F +DPLR+LRA+RF +RF F +D+ + A
Sbjct: 134 GLLDPYDG--CSDLKGGIIRTVGDPMKRFQEDPLRILRAVRFASRFGFAVDDRTESAM-- 189
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEPEVLEGC 335
A L ++ ER+ E M+ G+ H C + WI E ++G
Sbjct: 190 -RRLAPLIGGVAAERIENEFSRMLLGD-------HACNAIIEWIDVIGVFIPEALPMKGF 241
Query: 336 EMFCTAYLDAAWDLTQLIGSSTFNDDQRRLSQYAALF 372
+ ++ +D+ + + RR+++YAA F
Sbjct: 242 DQRTPYHI---YDVLEHSAHAVGAAPARRITRYAAFF 275
>gi|158319038|ref|YP_001511546.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Frankia sp. EAN1pec]
gi|158114443|gb|ABW16640.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Frankia sp. EAN1pec]
Length = 508
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Query: 177 RCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIV 235
R E Y SR P + +G +ED RRD T+N++ ++ DL G G+ADL G +
Sbjct: 122 RSESYDRTSRNPAVTYGEGLQEDLVRRDFTVNAMAVSVPGHDFVDLFG-GMADLARGVLR 180
Query: 236 TPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEI 295
TP PP+A+F DDPLR++RA RF A EL A S +A+ + +S ERV E+
Sbjct: 181 TPGPPEASFDDDPLRIMRAARFEAALGLTPVPELVAAMRS---RASRISIVSPERVRDEL 237
Query: 296 DLMVSGNQPVKAMTHIC 312
+++ P + +
Sbjct: 238 RKLIASRDPAAGLERLV 254
>gi|146297248|ref|YP_001181019.1| tRNA adenylyltransferase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145410824|gb|ABP67828.1| tRNA adenylyltransferase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 394
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 25/199 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG +RD LLG D DIA D K + + +T P+G K
Sbjct: 24 LVGGCLRDYLLGTTPQDFDIATD--------AKPEDVMKLFEKTIPTGI----------K 65
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRF-GTAEEDAYRRDLTINSLFYNINTS 216
H T T+ + ++ I+ R E +N R PT+ F + ED RRD TIN+L Y+ +
Sbjct: 66 H-GTVTVIINNVKIEVTTFRIEKEYQNHRWPTVEFTDSLYEDLKRRDFTINALAYHPDEG 124
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
++ G + DLK+ + P F +D LR+LR IRF + +F +DE+ +
Sbjct: 125 LIDYFNG--LDDLKNKIVRCVGNPHERFFEDALRILRCIRFATQLNFSIDEKTFEGVV-- 180
Query: 277 EVKAALAAKISRERVGTEI 295
+ L KIS+ER+ E+
Sbjct: 181 -LLKDLLKKISKERINAEL 198
>gi|359776040|ref|ZP_09279357.1| tRNA nucleotidyltransferase [Arthrobacter globiformis NBRC 12137]
gi|359306480|dbj|GAB13186.1| tRNA nucleotidyltransferase [Arthrobacter globiformis NBRC 12137]
Length = 506
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA--TKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LG+ D+D D A K A+ G FG I
Sbjct: 35 LSLVGGPVRDLFLGRTSPDLDFTTDATPDQTVALIKKWADNFWEIGRA----FGTI---- 86
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
M+ I+ R E Y SR P + FG++ +D RRD TIN++
Sbjct: 87 ---------GMRKAGFQIEITTYRAEAYDPESRKPVVAFGSSLTDDLLRRDFTINAMALR 137
Query: 213 INTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + + D G G+ DL + TP P+A+F DDPLR++RA RF ++ + ++++ A
Sbjct: 138 LPSMELVDPFG-GVRDLHASVLATPGAPEASFSDDPLRMMRAARFASQLGVAVRDDVRVA 196
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ ++ IS ERV E+ +V G P
Sbjct: 197 MTRMAERISI---ISAERVRDELVKLVCGRHP 225
>gi|334341494|ref|YP_004546474.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334092848|gb|AEG61188.1| CBS domain containing protein [Desulfotomaculum ruminis DSM 2154]
Length = 994
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 21/225 (9%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LL + D+D+ ++ G E A K+AE + A FG
Sbjct: 570 GGLVRDVLLKVENLDVDLVVEGK-GIELAHKLAETIGGRVR-AHEKFG------------ 615
Query: 160 ETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSV 218
TA + D W+D V R E Y + +P + + + D YRRD TIN++ +N
Sbjct: 616 -TAEIVFQDGYWVDVVTARVEYYEYPAALPQVEQSSLKHDLYRRDFTINAMAVALNPERF 674
Query: 219 EDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
+L G DL+ G + + +F++DP R+LRAIRF R+D ++ + + +
Sbjct: 675 GELVDYFNGREDLQIGAV--RVLHNLSFIEDPTRILRAIRFEQRYDMAIEPQTLR-LIKE 731
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
V+ + A++S ER+ E+ ++ P M + L ++ +F
Sbjct: 732 AVREKVLARLSTERMWGELKSILEEADPEDMMDRMSELGVWDYLF 776
>gi|325965282|ref|YP_004243188.1| tRNA adenylyltransferase [Arthrobacter phenanthrenivorans Sphe3]
gi|323471369|gb|ADX75054.1| tRNA adenylyltransferase [Arthrobacter phenanthrenivorans Sphe3]
Length = 501
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFA--TKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LG+ D+D D A K A+ G FG I
Sbjct: 35 LSLVGGPVRDLFLGRTSPDLDFTTDATPDQTVALIKKWADNYWEIGRA----FGTI---- 86
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
M+ I+ R E Y +SR P + FG++ +D RRD TIN++
Sbjct: 87 ---------GMRKAGFQIEVTTYRAEAYDPDSRKPVVAFGSSLTDDLLRRDFTINAMALK 137
Query: 213 INTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + + D G G+ DL + TP P+ +F DDPLR++RA RF A+ + ++ KA
Sbjct: 138 LPSLELVDPFG-GVRDLHASVLATPGAPELSFSDDPLRMMRAARFAAQLGVSVHPDVHKA 196
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+ + IS ERV E+ ++ G QP
Sbjct: 197 MTDMAERITI---ISAERVRDELVKLICGAQP 225
>gi|326383888|ref|ZP_08205572.1| tRNA adenylyltransferase [Gordonia neofelifaecis NRRL B-59395]
gi|326197347|gb|EGD54537.1| tRNA adenylyltransferase [Gordonia neofelifaecis NRRL B-59395]
Length = 484
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 21/216 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D+ D +AE L + G+ D
Sbjct: 42 LYLVGGSVRDAVLGRLAGDLDLTTDAR-----PAVIAEILRSWGDAVW----------DT 86
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
T + ++ R + Y + SR P + FG T + D RRD IN++ +
Sbjct: 87 GIDFGTVSAAKAGATVEITTFRSDIYDQQSRNPVVTFGDTLDGDLIRRDFRINAMAVRLL 146
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
++ G+ DL G I TP P+++F DDPLR+LR +RF ++ F + + + +A
Sbjct: 147 PGGGQEFCDPLDGMTDLLAGIIDTPAAPESSFNDDPLRMLRGVRFVSQLGFRMSDRVLEA 206
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
S A +I+ ER+ E+D + G P++A+
Sbjct: 207 TRS---MAGQIERITAERIRVELDKTICGEHPLEAV 239
>gi|149185903|ref|ZP_01864218.1| tRNA nucleotidyltransferase [Erythrobacter sp. SD-21]
gi|148830464|gb|EDL48900.1| tRNA nucleotidyltransferase [Erythrobacter sp. SD-21]
Length = 391
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 96/200 (48%), Gaps = 21/200 (10%)
Query: 97 RVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
R GG VRD LLGK +D+D+A ++ E + E +G +P+ D
Sbjct: 28 RYVGGAVRDTLLGKAIHDVDLAT-PLLPHEVIDRCRE----------AGIRTVPTGIDHG 76
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNINT 215
T T L + ++ LR D S + R T+ F ++DA RRD TIN+L+ + +
Sbjct: 77 ----TVTAILPEGPVEITTLR-RDVSSDGRRATVAFAQEWKDDASRRDFTINALYAHPGS 131
Query: 216 SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+ED G G+ADL+ G + + +D LR+LR RF ARF LDEE A
Sbjct: 132 LEIEDFFG-GVADLERGHVRFIGEAEERIREDHLRILRYFRFQARFGDALDEEAVNACRD 190
Query: 276 DEVKAALAAKISRERVGTEI 295
A +SRERV E+
Sbjct: 191 ---LAHTLKGLSRERVAMEL 207
>gi|118620062|ref|YP_908394.1| poly(a) polymerase PcnA [Mycobacterium ulcerans Agy99]
gi|118572172|gb|ABL06923.1| poly(a) polymerase PcnA [Mycobacterium ulcerans Agy99]
Length = 481
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 96 LRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPD 154
L + GG VRD LLG+ D+D D + V + A +T FG I
Sbjct: 39 LYLVGGSVRDALLGRLKSPDLDFTTD-ARPQQILKIVRPWADAVWDTGIE-FGTI----- 91
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNI 213
+ D ++ R + Y + SR P +RFG E+D RRD T+N++ I
Sbjct: 92 --------GIAKNDYRLEITTFRADSYDQVSRHPEVRFGERLEDDLVRRDFTVNAMAVRI 143
Query: 214 NTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
S + G++ L+ + TP P +F DDPLR+LRA RF ++ F + ++
Sbjct: 144 TASGPGEFLDPLGGLSVLRDKVLDTPAAPSVSFGDDPLRMLRAARFVSQLGFAVAPRVRD 203
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A E A A+IS ERV E+D ++ G PV +
Sbjct: 204 AI---EEMAPQLARISAERVAAELDKLLLGEDPVAGI 237
>gi|332160459|ref|YP_004297036.1| poly(A) polymerase I [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|433551501|ref|ZP_20507543.1| Poly(A) polymerase [Yersinia enterocolitica IP 10393]
gi|325664689|gb|ADZ41333.1| poly(A) polymerase I [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|431787683|emb|CCO70583.1| Poly(A) polymerase [Yersinia enterocolitica IP 10393]
Length = 472
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 103/237 (43%), Gaps = 30/237 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET---APSGFGVIPSNPD 154
+ GG VRD LLGK D DI E K+ G A FG
Sbjct: 68 LVGGGVRDLLLGKKPKDFDITTSAT--PEQVRKLFRNCRLVGRRFRLAHVMFG------- 118
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR--------FGTAEEDAYRRDLTI 206
+ +E AT + + + ED +NS FGT E+DA RRD TI
Sbjct: 119 -PEIIEVATFRGH-----HEQQQTEDSDKNSSQQAQNGMLLRDNIFGTIEDDAQRRDFTI 172
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
NSL+Y I+ ++ D TG G+ DLK G I P+ + +DP+R+LRA+RF A+ D +
Sbjct: 173 NSLYYGISDFALRDYTG-GLRDLKEGIIRLIGSPETRYREDPVRMLRAVRFAAKLDMTIS 231
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
E A A+L +I R+ E ++ K +C LF +F L
Sbjct: 232 PE---TAEPIPRLASLLHEIPPARLFEESLKLLQSGYGYKTYLKLCEYQLFQPLFPL 285
>gi|383783274|ref|YP_005467841.1| putative RNA nucleotidyltransferase [Actinoplanes missouriensis
431]
gi|381376507|dbj|BAL93325.1| putative RNA nucleotidyltransferase [Actinoplanes missouriensis
431]
Length = 476
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG D+D D A V + A ET FG I
Sbjct: 36 LHLVGGSVRDALLGTLGDDLDFCTDARPEQTLAV-VQGWADAIWETGRE-FGTI------ 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAE-EDAYRRDLTINSLFYNIN 214
++ L I+ R E Y +R P + +GT+ +D RRD TIN++ ++
Sbjct: 88 -------GIQKNGLRIEITTFRAEAYDGVTRNPVVSYGTSLLDDLSRRDFTINAMAVSVP 140
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL I TP P+ +F DDPLR+LRA RF A+ F +DE + AA
Sbjct: 141 GHEFTDPFG-GLRDLSAKLIRTPAAPQISFGDDPLRMLRAARFAAKLRFTVDEPV--IAA 197
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
++ A L +I+ ER+ E ++ P+ +
Sbjct: 198 MRDMAADL-DRITAERIRDEFTKLMIAADPISGL 230
>gi|386311398|ref|YP_006007454.1| poly(A) polymerase [Yersinia enterocolitica subsp. palearctica Y11]
gi|418240013|ref|ZP_12866556.1| poly(A) polymerase I [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|318607077|emb|CBY28575.1| poly(A) polymerase [Yersinia enterocolitica subsp. palearctica Y11]
gi|330859189|emb|CBX69540.1| poly(A) polymerase [Yersinia enterocolitica W22703]
gi|351780516|gb|EHB22586.1| poly(A) polymerase I [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
Length = 478
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 103/237 (43%), Gaps = 30/237 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET---APSGFGVIPSNPD 154
+ GG VRD LLGK D DI E K+ G A FG
Sbjct: 74 LVGGGVRDLLLGKKPKDFDITTSAT--PEQVRKLFRNCRLVGRRFRLAHVMFG------- 124
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR--------FGTAEEDAYRRDLTI 206
+ +E AT + + + ED +NS FGT E+DA RRD TI
Sbjct: 125 -PEIIEVATFRGH-----HEQQQTEDSDKNSSQQAQNGMLLRDNIFGTIEDDAQRRDFTI 178
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
NSL+Y I+ ++ D TG G+ DLK G I P+ + +DP+R+LRA+RF A+ D +
Sbjct: 179 NSLYYGISDFALRDYTG-GLRDLKEGIIRLIGSPETRYREDPVRMLRAVRFAAKLDMTIS 237
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
E A A+L +I R+ E ++ K +C LF +F L
Sbjct: 238 PE---TAEPIPRLASLLHEIPPARLFEESLKLLQSGYGYKTYLKLCEYQLFQPLFPL 291
>gi|400533488|ref|ZP_10797027.1| hypothetical protein MCOL_V203815 [Mycobacterium colombiense CECT
3035]
gi|400333832|gb|EJO91326.1| hypothetical protein MCOL_V203815 [Mycobacterium colombiense CECT
3035]
Length = 480
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LLG+ D+D D + + A+ L TG FG
Sbjct: 39 LYLVGGSVRDALLGRLSPDLDFTTDARPEQVQQILRRWADNLWDTGIE----FG------ 88
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
T + D ++ R + Y + SR P +RFG ++D RRD T N++
Sbjct: 89 -------TVGVGKGDHRLEITTFRADTYDQVSRNPEVRFGDRLDDDLVRRDFTANAMAVR 141
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I + + G+A L+ + TP P+ +F DDPLR+LRA RF ++ F + ++
Sbjct: 142 ITPAGPGEFLDPLGGLAALRARMLDTPAAPEVSFGDDPLRMLRAARFVSQLGFTVAPRVR 201
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+A E A ++IS ERV TE+D +V G+ P +
Sbjct: 202 EAI---EHMAPQLSRISAERVATELDKLVLGDDPTAGI 236
>gi|123441078|ref|YP_001005067.1| poly(A) polymerase I [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|122088039|emb|CAL10827.1| poly(A) polymerase [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 440
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 103/237 (43%), Gaps = 30/237 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET---APSGFGVIPSNPD 154
+ GG VRD LLGK D DI E K+ G A FG
Sbjct: 36 LVGGGVRDLLLGKKPKDFDIT--TSATPEQVRKLFRNCRLVGRRFRLAHVMFG------- 86
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR--------FGTAEEDAYRRDLTI 206
+ +E AT + + + ED +NS FGT E+DA RRD TI
Sbjct: 87 -PEIIEVATFRGH-----HEQQQTEDSDKNSSQQAQNGMLLRDNIFGTIEDDAQRRDFTI 140
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
NSL+Y I+ ++ D TG G+ DLK G I P+ + +DP+R+LRA+RF A+ D +
Sbjct: 141 NSLYYGISDFALRDYTG-GLRDLKEGIIRLIGDPETRYREDPVRMLRAVRFAAKLDMTIS 199
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
E A A+L +I R+ E ++ K +C LF +F L
Sbjct: 200 PE---TAEPIPRLASLLHEIPPARLFEESLKLLQSGYGYKTYLKLCEYQLFQPLFPL 253
>gi|359423230|ref|ZP_09214371.1| putative tRNA nucleotidyltransferase [Gordonia amarae NBRC 15530]
gi|358241480|dbj|GAB03953.1| putative tRNA nucleotidyltransferase [Gordonia amarae NBRC 15530]
Length = 498
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD +LG+ D+D D E V + A + FG
Sbjct: 57 LVGGSVRDAVLGRLSNDLDFTTD-ARPDEVIALVTGWADAIWDAGIE-FG---------- 104
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTS 216
T +++ DL I+ R E Y R P + FG T + D RRD T+N++ I
Sbjct: 105 ---TVSIRKADLIIEITTYRAEAYDRVGRNPVVTFGDTLDGDLIRRDFTVNAMAVRIGPD 161
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
++ G++ L G I TP P+ +F DDPLR+LRA+RF ++ F L + A
Sbjct: 162 GAQEFCDPLDGLSALLAGIIDTPATPQESFDDDPLRMLRAVRFVSQLGFRLAPRVVDAIT 221
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
E+ + +I+ ERV E+D ++ G P+ +
Sbjct: 222 --EMNGQI-ERITAERVRVELDKLICGEHPIDGL 252
>gi|350551925|ref|ZP_08921135.1| poly(A) polymerase [Thiorhodospira sibirica ATCC 700588]
gi|349795855|gb|EGZ49648.1| poly(A) polymerase [Thiorhodospira sibirica ATCC 700588]
Length = 465
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 92/177 (51%), Gaps = 22/177 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET---APSGFGVIPSNPD 154
+ GG VRD LLG++ D DIA D E ++ G A FG
Sbjct: 56 LVGGGVRDLLLGREPKDFDIATDAH--PEQVRQIFRNCRLIGRRFRLAHVFFG------- 106
Query: 155 QSKHLETATMK--LYDLWIDFVNLRCEDYSENSRIPTMR---FGTAEEDAYRRDLTINSL 209
+ +E AT + L D D R E+ RI +R +GT E+DA+RRD ++N+L
Sbjct: 107 -REIIEVATFRAALGDEHTD-GKPRSGALLEDGRI--IRDNVYGTIEQDAWRRDFSVNAL 162
Query: 210 FYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
+Y+I+T SV D TG G+ DLK G + P F +DP+R+LRA+RF A+ F LD
Sbjct: 163 YYDISTFSVLDYTG-GMDDLKRGVLRLIGDPAVRFREDPVRLLRAVRFAAKLGFKLD 218
>gi|429202091|ref|ZP_19193512.1| tRNA adenylyltransferase [Streptomyces ipomoeae 91-03]
gi|428662371|gb|EKX61806.1| tRNA adenylyltransferase [Streptomyces ipomoeae 91-03]
Length = 477
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D E K+ + FG + + D
Sbjct: 30 LALVGGSVRDALLGRLGNDLDFTTDAR--PEDVLKIVRPWADAVWDVGIAFGTVGAQKDA 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ + I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 88 RVGDADRSFQ-----IEITTYRSEAYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMAVALP 142
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+ +F DDPLR++RA RF A+ DF + E+ A
Sbjct: 143 EKEFIDPHG-GLEDLAARVLRTPGTPEESFSDDPLRMMRAARFAAQLDFEVAPEVISAMT 201
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF-WIVFKLP 324
+ + +S ERV E++ ++ P K +T + L +++ +LP
Sbjct: 202 DMADRLEI---VSAERVRDELNKLILSAHPRKGLTLLVDTGLAEYVLPELP 249
>gi|422011659|ref|ZP_16358449.1| CCA tRNA nucleotidyltransferase [Actinomyces georgiae F0490]
gi|394764313|gb|EJF46168.1| CCA tRNA nucleotidyltransferase [Actinomyces georgiae F0490]
Length = 506
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LG +D D+ G + E L G D K
Sbjct: 33 GGPVRDAFLGVAPHDFDLTTSATPG-----RTEELLGQWGNAVW----------DIGKKF 77
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTSSV 218
T + D+ ++ R + Y SR P + FG T E D RRD T+N++ + ++
Sbjct: 78 GTIGARRGDVVVEVTTYRADSYQIGSRKPEVTFGDTLEGDLTRRDFTVNAMAMRLPRMAL 137
Query: 219 EDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEV 278
D G G+ADL G + TP+ + +F DDPLR++RA RF A+ +D ++ A E
Sbjct: 138 VDPCG-GLADLAAGNLRTPVSAEQSFDDDPLRIMRAARFSAQLGMDVDLDVMSAM---ED 193
Query: 279 KAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A +S ER+ TE++ ++ P + +
Sbjct: 194 MAHRLGIVSAERIRTELERLIVSPYPRRGI 223
>gi|297622074|ref|YP_003710211.1| poly(A) polymerase [Waddlia chondrophila WSU 86-1044]
gi|297377375|gb|ADI39205.1| Poly(A) polymerase [Waddlia chondrophila WSU 86-1044]
Length = 403
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 120/262 (45%), Gaps = 29/262 (11%)
Query: 72 LTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKV 131
+T+ E+ ++ TLR N AGGWVRD LL DIDIA D K+
Sbjct: 1 MTNVESGALK-IIQTLR--NAGYAAYYAGGWVRDFLLDHPSDDIDIATDAK-----PEKI 52
Query: 132 AEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYS-ENSRIPTM 190
E T E S FGV+ D ++ E AT + ED E+ R PT
Sbjct: 53 VELFQKTIEVGIS-FGVVVVLMDGHQY-EVATFR-------------EDLGYEDGRRPTQ 97
Query: 191 -RFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPL 249
+ AE DA RRD TIN +FY+ +V D G DL+ G I P F +D L
Sbjct: 98 CAYTNAEGDAKRRDFTINGMFYDPLEKNVIDFVD-GRKDLEKGVIRAIGDPYERFKEDRL 156
Query: 250 RVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
R++RAIRF RF + LD + ++ A D A ++ ERV E+ M +A+
Sbjct: 157 RMIRAIRFTYRFGYALDPDTEQ-AIKDHAHCLFPA-VAMERVWHELQKMARYPSFGEALL 214
Query: 310 HICGLTLFWIVFKLPLQVEPEV 331
+ + L VF PL+ PE+
Sbjct: 215 KMHAVGLLAEVFP-PLKKVPEI 235
>gi|338707222|ref|YP_004661423.1| polynucleotide adenylyltransferase region [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336294026|gb|AEI37133.1| Polynucleotide adenylyltransferase region [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 402
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 116/241 (48%), Gaps = 20/241 (8%)
Query: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT 129
I L D + + L + + F ++++R GG VRD LL DID A + E
Sbjct: 3 IYLPDASWRHHNGLGHLIDVFGGDSMIRFVGGGVRDSLLKTAVSDIDCATRHH--PEETV 60
Query: 130 KVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT 189
K+ + +GF +P+ T T L ++ +LR +D S + R T
Sbjct: 61 KLIK---------DAGFKAVPTGIQHG----TVTAVLPSGPVEITSLR-KDVSTDGRHAT 106
Query: 190 MRFGTA-EEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDP 248
+ + + ++DA RRD TIN+L+ N+S + D G GIADL+ G + P+ +D
Sbjct: 107 IAYSDSWQDDAMRRDFTINALYAEPNSSLIHDYFG-GIADLEAGCVRFIGDPETRIAEDH 165
Query: 249 LRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
LR+LR RF ARF + + AA +A +SRER+ +E+ +++ P+ +
Sbjct: 166 LRILRYFRFQARFGRGIPDAASLAACIKRANDLMA--LSRERIASELIKILALPAPLAII 223
Query: 309 T 309
T
Sbjct: 224 T 224
>gi|331270840|ref|YP_004397277.1| PolyA polymerase family protein [Clostridium botulinum BKT015925]
gi|329127558|gb|AEB77501.1| PolyA polymerase family protein [Clostridium botulinum BKT015925]
Length = 440
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 111/235 (47%), Gaps = 27/235 (11%)
Query: 76 ETKIFSC---LLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVA 132
E K+ C +++ L+ FN E + GG VRD LL K D DI S KV
Sbjct: 2 EIKMPKCVGYIIHKLQEFNYEAY--IVGGCVRDSLLKKTPNDWDITT-----SALPNKVV 54
Query: 133 EYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MR 191
+ G + +IP+ T T+ + + + R + E++R P +
Sbjct: 55 DIFQNLG------YKIIPTGLKHG----TVTIVINNEHYEVTTYRIDGEYEDNRHPKKVE 104
Query: 192 FG-TAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLR 250
F +ED RRD TINS+ YN V+ + DL+ G + + P F +D LR
Sbjct: 105 FTRNLKEDLSRRDFTINSMAYNDKDGLVDYFNSKN--DLESGIVKSVGDPMKRFSEDALR 162
Query: 251 VLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPV 305
+LRA RF A+ F++++E +A+ +VK L + IS ER+ EID M+ N +
Sbjct: 163 ILRAYRFAAQLGFVIEDET--LSATMQVKDNLKS-ISIERIRDEIDKMLLANSSI 214
>gi|256833750|ref|YP_003162477.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Jonesia denitrificans DSM 20603]
gi|256687281|gb|ACV10174.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Jonesia denitrificans DSM 20603]
Length = 492
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETA---PSGFGVIPSN 152
L + GG VRD LLG+ +D+D A S + L G++ FG I +
Sbjct: 44 LAIVGGPVRDALLGRTSHDLDFAT-----SASPDETEALLRTWGDSHWDIGKEFGTIGA- 97
Query: 153 PDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFY 211
+ D+ ++ R + Y SR P + FG T + D RRD T+N++
Sbjct: 98 ------MRHGVNGSDDIVVEITTYRTDKYDPTSRKPLVAFGDTLDGDLSRRDFTVNAMAI 151
Query: 212 NINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
+ + D G+ DL HG + TP+ P+ +F DDPLR++RA RF A+ F ++ +
Sbjct: 152 RLPELTFADPFD-GLNDLSHGLLRTPIRPEQSFDDDPLRMMRAARFAAQLGFTVEPDAFA 210
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A A+ + ++ +S ERV E+ ++ PV +
Sbjct: 211 AIAAMAGRISI---VSAERVRDELTKLMLSAHPVTGL 244
>gi|219669447|ref|YP_002459882.1| polynucleotide adenylyltransferase [Desulfitobacterium hafniense
DCB-2]
gi|423073611|ref|ZP_17062350.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Desulfitobacterium hafniense DP7]
gi|219539707|gb|ACL21446.1| Polynucleotide adenylyltransferase region [Desulfitobacterium
hafniense DCB-2]
gi|361855452|gb|EHL07420.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Desulfitobacterium hafniense DP7]
Length = 873
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LL D+D ++ G FA +A+ L FG +
Sbjct: 476 VVGGFVRDILLKVPTQDLDFVIEGD-GHAFARALAQRLQDVQVVFHDQFGTARLDFADGS 534
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
HL+ A+ R EDYS +P + +D +RRD TIN++ +N+
Sbjct: 535 HLDVASS------------RREDYSSPGALPQVEESRLRDDMFRRDFTINAMAIAVNSVR 582
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ DLK G+I +F++DP R+LRA+RF R+ F L +E ++ +
Sbjct: 583 YGELVDYYGGLRDLKQGEI--RFLHNLSFIEDPTRILRALRFAGRYGFRLAKETREGLYT 640
Query: 276 DEVKAALAAKISRERVGTEIDLMVS 300
+ A + K+S ER E M+S
Sbjct: 641 -ALDAGVLQKLSIERFTEEFMHMLS 664
>gi|227529198|ref|ZP_03959247.1| tRNA adenylyltransferase [Lactobacillus vaginalis ATCC 49540]
gi|227350873|gb|EEJ41164.1| tRNA adenylyltransferase [Lactobacillus vaginalis ATCC 49540]
Length = 403
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD +LG +DIDIA S + +++ + T +T V+ D
Sbjct: 31 GGCVRDTILGDSIHDIDIAT-----SAYPSEIKAIFNRTVDTGIEHGTVMIL--DHGTGY 83
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVE 219
ET T + + +D+ ++ +R + ED RRD TIN+L N ++
Sbjct: 84 ETTTFRTESGY--------QDFRRPDKVTFVR--SLSEDLKRRDFTINALALKENGEVID 133
Query: 220 DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVK 279
G + DLKH I P F +D LR++RA+RF ++ DF++ E A +
Sbjct: 134 LFNG--LDDLKHHLIKAVGDPNERFHEDALRMMRAVRFASKLDFVIAAE---TLAGIKQN 188
Query: 280 AALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF 317
AAL KI+ ER+ E + ++ G PV + L+
Sbjct: 189 AALLEKIAVERIRVEFEKLLMGQNPVAGLNEFLQTGLY 226
>gi|269129150|ref|YP_003302520.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Thermomonospora curvata DSM 43183]
gi|268314108|gb|ACZ00483.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Thermomonospora curvata DSM 43183]
Length = 490
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D+ D E ++ E + T FG
Sbjct: 46 LALVGGPVRDALLGRPGKDVDLTTDAT--PEQVLQLVEGWADAIWTIGIEFG-------- 95
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T ++ DL ++ R E Y SR P + +G + ED RRD +N++ +
Sbjct: 96 -----TVGLRKGDLQLEITTYRSESYDPKSRKPEVSYGKSLTEDLARRDFAVNAMAARLP 150
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL+ + TP P+ +F DDPLR++RA RF A+ F + E+ AA
Sbjct: 151 GHEFVDPFG-GLGDLRRKTLRTPGRPEDSFNDDPLRMMRAARFAAQLGFTVAPEV-VAAM 208
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
D A +S ER+ E+ ++ +P +T
Sbjct: 209 RD--MAGRIEIVSAERIRDELSKLICAPRPRAGLT 241
>gi|408789554|ref|ZP_11201209.1| tRNA nucleotidyltransferase [Lactobacillus florum 2F]
gi|408521160|gb|EKK21146.1| tRNA nucleotidyltransferase [Lactobacillus florum 2F]
Length = 404
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LL K+ +D+D+A S + ++ + T +T G I D+ K
Sbjct: 31 GGCVRDTLLHKELHDVDLA-----TSAYPAEIKQIFPITIDTGIE-HGTITVRYDR-KSF 83
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVE 219
E T + + +DY ++ +R + +ED RRD TIN+L T V
Sbjct: 84 EITTFRTESGY--------QDYRRPDQVTFVR--SLKEDLQRRDFTINALAMT-ATGDVI 132
Query: 220 DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVK 279
DL G+ DL I P+ F +D LR++RA+RFG++ DF ++ K+ + K
Sbjct: 133 DLFS-GLRDLDQRLIKAVGDPEQRFQEDALRLMRAVRFGSQLDFCIE---KQTLVAMYHK 188
Query: 280 AALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
AAL KIS ER+ E M+ G P+ + +
Sbjct: 189 AALLEKISIERINAEFSKMMLGQTPMHGLEQM 220
>gi|111226195|ref|YP_716989.1| RNA nucleotidyltransferase [Frankia alni ACN14a]
gi|111153727|emb|CAJ65485.1| RNA nucleotidyltransferase [Frankia alni ACN14a]
Length = 494
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 103/236 (43%), Gaps = 26/236 (11%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT-----KVAEYLSATGET---APSGF 146
+L + GG VRD LLG+ A +FAT +V E E A F
Sbjct: 40 LLHLVGGSVRDALLGRPTTGATGAGGAPADLDFATDARPERVLEITRGWAEATWEAGIAF 99
Query: 147 GVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLT 205
G T + L + R E Y SR P + +G + E D RRD T
Sbjct: 100 G-------------TVGLARRGLRFEITTYRSEAYDRQSRNPQVTYGDSLEADLSRRDFT 146
Query: 206 INSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFIL 265
+N++ ++ DL G G+ADL G + TP P A+F DDPLR+LRA RF A
Sbjct: 147 VNAMAVSVPGHDFVDLFG-GMADLARGVLRTPASPAASFDDDPLRILRAARFEATLGLTP 205
Query: 266 DEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
EL +A + + A+ +S ER+ E+ ++ PV + + + + IV
Sbjct: 206 VPELVEAMRARTERLAI---VSPERIRDELRKLLLAADPVAGLERLVEIGVADIVL 258
>gi|330443931|ref|YP_004376917.1| poly A polymerase [Chlamydophila pecorum E58]
gi|328807041|gb|AEB41214.1| poly A polymerase [Chlamydophila pecorum E58]
Length = 410
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 100 GGWVRDKLLGKDCYDIDIALDN---MMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQS 156
GG VRD L+GK DIDIA D ++ + F+ + + + FG+I
Sbjct: 27 GGCVRDMLMGKPMVDIDIATDAPPVIVSTIFSDVI---------SIGAAFGII------- 70
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRFGTAEEDAYRRDLTINSLFYNINT 215
+KL + R + + R P ++F + EDA RRD +IN ++Y+
Sbjct: 71 ------VVKLEGYLFEVATFRNDGQYTDGRHPQQVKFSSMREDALRRDFSINGIYYDPFE 124
Query: 216 SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+ D GI D++ I P+ F +D LR+LRAIRF + +F LD ++A
Sbjct: 125 DKLFDFV-EGIRDIEKKVIRAIGHPRLRFAEDKLRILRAIRFASSLEFTLDPATERALIK 183
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+ L + +S ER+ E+ M+ + P +AM
Sbjct: 184 E--APTLVSAVSPERIWQELKKMMK-SHPYQAM 213
>gi|89895037|ref|YP_518524.1| hypothetical protein DSY2291 [Desulfitobacterium hafniense Y51]
gi|89334485|dbj|BAE84080.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 873
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LL D+D ++ G FA +A+ L FG +
Sbjct: 476 VVGGFVRDILLKVPTQDLDFVIEGD-GHAFARALAQRLQDVQVVFHDQFGTARLDFADGS 534
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
HL+ A+ R EDYS +P + +D +RRD TIN++ +N+
Sbjct: 535 HLDVASS------------RREDYSSPGALPQVEESRLRDDMFRRDFTINAMAIAVNSVR 582
Query: 218 VEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+L G+ DLK G+I +F++DP R+LRA+RF R+ F L +E ++ +
Sbjct: 583 YGELVDYYGGLRDLKQGEI--RFLHNLSFIEDPTRILRALRFAGRYGFRLAKETREGLYT 640
Query: 276 DEVKAALAAKISRERVGTEIDLMVS 300
+ A + K+S ER E M+S
Sbjct: 641 -ALDAGVLQKLSIERFTEEFMHMLS 664
>gi|441142576|ref|ZP_20962444.1| polynucleotide adenylyltransferase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440622521|gb|ELQ85300.1| polynucleotide adenylyltransferase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 491
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + V + A E + FG + D
Sbjct: 55 LALVGGSVRDALLGRLGNDLDFTTD-ARPEDVLKIVRPWADAVWEVGIA-FGTVGCKKDS 112
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+D I+ R E Y SR P + +G + E+D RRD T+N++ +
Sbjct: 113 -----------FD--IEVTTYRSEAYDRTSRKPEVSYGDSIEQDLVRRDFTVNAMAVALP 159
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G+ DL + TP P+ +F DDPLR++RA RF A+ DF + E++ A
Sbjct: 160 QKEFID-PHNGLEDLAARVLRTPGTPEESFSDDPLRMMRAARFAAQLDFEVAEDIVSAM- 217
Query: 275 SDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAM 308
A+A +I S ERV E++ ++ G+ P K +
Sbjct: 218 -----KAMAERIDIVSAERVRDELNKLLLGSHPRKGL 249
>gi|420257261|ref|ZP_14760026.1| poly(A) polymerase I [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|404515284|gb|EKA29054.1| poly(A) polymerase I [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 478
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 103/237 (43%), Gaps = 30/237 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET---APSGFGVIPSNPD 154
+ GG VRD LLGK D DI E K+ G A FG
Sbjct: 74 LVGGGVRDLLLGKKPKDFDITTSAT--PEQVRKLFRNCRLVGRRFRLAHVMFG------- 124
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR--------FGTAEEDAYRRDLTI 206
+ +E AT + + + ED +NS FGT E+DA RRD TI
Sbjct: 125 -PEIIEVATFRGH-----HEQQQTEDSDKNSSQQAQNGMLLRDNIFGTIEDDAQRRDFTI 178
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
NSL+Y I+ ++ D TG G+ DLK G I P+ + +DP+R+LRA+RF A+ D +
Sbjct: 179 NSLYYGISDFALRDYTG-GLRDLKEGIIRLIGDPETRYREDPVRMLRAVRFAAKLDMTIS 237
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
E A A+L +I R+ E ++ K +C LF +F L
Sbjct: 238 PE---TAEPIPRLASLLHEIPPARLFEESLKLLQSGYGYKTYLKLCEYQLFQPLFPL 291
>gi|227506205|ref|ZP_03936254.1| possible tRNA adenylyltransferase [Corynebacterium striatum ATCC
6940]
gi|227197229|gb|EEI77277.1| possible tRNA adenylyltransferase [Corynebacterium striatum ATCC
6940]
Length = 467
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LL + +D+D D V E L ET D
Sbjct: 32 LYLVGGSVRDALLSRLGHDLDFTTDAR-----PEVVQEILDGWAETVW----------DT 76
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T + I+ R + Y +SR P + FG + E D RRD +N++ +
Sbjct: 77 GIDFGTVSAVYKGQQIEITTFRSDSYDGDSRNPEVVFGDSLEGDLVRRDFKVNAMAIELK 136
Query: 215 TSSVE--DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
E D G G+ DLK+ + TP P+ +F DDPLR+LRA RF ++ +F + E +K A
Sbjct: 137 EDGYEFHDPMG-GLTDLKNKILDTPDKPEISFHDDPLRMLRAARFASQLEFDVAERVKTA 195
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
A +I+ ERV E+D ++ G P
Sbjct: 196 MTE---MAGEIRRITVERVQVELDKLMLGKNP 224
>gi|886309|gb|AAB53125.1| polyA polymerase [Mycobacterium leprae]
Length = 411
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 32/216 (14%)
Query: 96 LRVAGGWVRDKLLGK-DCYDIDIALDNMMGSEFATKV----AEYLSATGETAPSGFGVIP 150
L + GG VRD LLG+ D D+D A D G E ++ A+ L TG FG I
Sbjct: 39 LYLVGGSVRDALLGRLDSPDLDFATD--AGPEQVQQIMRRWADNLWETGIE----FGTI- 91
Query: 151 SNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSL 209
+ D ++ R + Y + SR P +RF ++D RRD T+N++
Sbjct: 92 ------------GVGKGDYRLEITTFRADRYDQVSRNPEVRFSDRLDDDLVRRDFTVNAM 139
Query: 210 FYNINT---SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
I + D G G+A L+ + TP P +F DDPLR++RA RF ++ F +
Sbjct: 140 AVRIASYGPGEFFDPLG-GLAALRVRVLETPAAPSVSFGDDPLRIVRAARFVSQLGFTVA 198
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGN 302
++ AA +E+ + L A+IS ERV TE+D ++ GN
Sbjct: 199 PQVH--AAIEEMASQL-ARISAERVSTELDKLLLGN 231
>gi|345849334|ref|ZP_08802347.1| RNA nucleotidyltransferase [Streptomyces zinciresistens K42]
gi|345639240|gb|EGX60734.1| RNA nucleotidyltransferase [Streptomyces zinciresistens K42]
Length = 480
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D E K+ + + FG + + D
Sbjct: 44 LALVGGSVRDALLGRLGNDLDFTTGAR--PEDVLKIMRPWADSVWEVGIAFGTVGAQKDG 101
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R E Y SR P + +G + E+D RRD T+N++ +
Sbjct: 102 YQ-------------IEVTTYRSEAYDRTSRKPEVSYGDSIEQDLVRRDFTVNAMAVALP 148
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+ +F DDPLR++RA RF A+ DF + E+ A
Sbjct: 149 EKEFVDPYG-GLVDLAERVLRTPGTPEESFSDDPLRMMRAARFAAQLDFQVAPEVVTAMT 207
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
A +S ERV E++ +V P K +T
Sbjct: 208 E---MAGRVEIVSAERVRDELNKLVLSAHPRKGLT 239
>gi|345000877|ref|YP_004803731.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Streptomyces sp. SirexAA-E]
gi|344316503|gb|AEN11191.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Streptomyces sp. SirexAA-E]
Length = 505
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D E K+ + + FG + S D
Sbjct: 69 LALVGGSVRDALLGRLGNDLDFTTDAR--PEDVLKIVRPWADSVWEVGIAFGTVGSQKDG 126
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 127 YQ-------------IEITTYRSEAYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMAVALP 173
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+ +F DDPLR+LRA RF A+ DF + ++ A
Sbjct: 174 EKEFVDPHG-GLDDLAARVLRTPGTPEESFSDDPLRMLRAARFAAQLDFEVAPDVLTAMT 232
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A +S ERV E++ ++ P K +
Sbjct: 233 D---MAGRIEIVSAERVREELNKLLLSGHPRKGL 263
>gi|334565160|ref|ZP_08518151.1| tRNA nucleotidyltransferase [Corynebacterium bovis DSM 20582]
Length = 525
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 27/219 (12%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ +D+D D +V E L+ ET D
Sbjct: 46 LHLVGGSVRDALLGRLSHDLDFTTDAR-----PEQVVEILTPLAETVW----------DT 90
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYN-- 212
T + + ++ R + Y +SR P + +G T E D RRD N++
Sbjct: 91 GIAYGTVSAMIRGTVVEITTYRADTYDGDSRNPEVTYGDTLEGDLVRRDFRCNAMALELS 150
Query: 213 -INTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
+ D G G+ DL+ G + TP P+ +F DDPLR+LRA RF A+ F + +++
Sbjct: 151 PVGEHVFHDPLG-GLDDLEAGILDTPAAPETSFHDDPLRMLRACRFVAQLGFDVSARVRE 209
Query: 272 A--AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A A S E+ A+I+ ERV E++ ++ G P + +
Sbjct: 210 AMTAMSGEI-----ARITVERVQAELNTLLLGVAPGQGL 243
>gi|288817886|ref|YP_003432233.1| poly A polymerase [Hydrogenobacter thermophilus TK-6]
gi|384128648|ref|YP_005511261.1| Polynucleotide adenylyltransferase region [Hydrogenobacter
thermophilus TK-6]
gi|288787285|dbj|BAI69032.1| poly A polymerase [Hydrogenobacter thermophilus TK-6]
gi|308751485|gb|ADO44968.1| Polynucleotide adenylyltransferase region [Hydrogenobacter
thermophilus TK-6]
Length = 820
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 25/199 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLGK+ +D+D ++ A KVAE L+ + F P+
Sbjct: 455 LVGGVVRDILLGKEVWDVDFVVEGD-----AIKVAELLAQKHKVEFHPF------PE--- 500
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT-- 215
TA +K+ L ++ R E Y P + + + ED RRD TIN++ ++N+
Sbjct: 501 -FGTAHVKVKGLKLELATTRRETYPHPGAYPLVEYASLREDLLRRDFTINAMAVSVNSQD 559
Query: 216 -SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE----LK 270
++ D G G+ DLK +++ L P +F++DP+R+LRA+RF R F L + L+
Sbjct: 560 FGTLIDYFG-GLRDLKD-RLIRVLHP-LSFVEDPVRILRALRFAGRLGFKLSKSTERLLR 616
Query: 271 KAAASDEVKAALAAKISRE 289
A + + +A +I E
Sbjct: 617 SAVSLGAISSAPKGRIMNE 635
>gi|317509432|ref|ZP_07967050.1| tRNA adenylyltransferase [Segniliparus rugosus ATCC BAA-974]
gi|316252261|gb|EFV11713.1| tRNA adenylyltransferase [Segniliparus rugosus ATCC BAA-974]
Length = 487
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPD 154
L + GG VRD +LG+ D+D D E K+ + FG + + D
Sbjct: 48 ALYLVGGSVRDAVLGRLGDDLDFTTDAK--PEQTQKLLRGWADELWDVGIAFGTVGAVKD 105
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNI 213
K ++ R + Y + SR P + FGT D RRD +N++ ++
Sbjct: 106 GHK-------------LEITTYRTDSYDQRSRNPVVAFGTDLRGDLVRRDFRMNAMAVSL 152
Query: 214 NTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
+ G+ D+ GKI TP P+ +F DDPLR+LRA RF A+ F +
Sbjct: 153 TEQGCGEFVDPLGGLDDVLAGKIDTPDSPEISFGDDPLRMLRAARFAAQLGFTWSPRVVL 212
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLF-WIVFKLP 324
A E A +I+ ER+G E++ ++ G V+ + H+ L +++ +LP
Sbjct: 213 AV---EKMAGEIQRITAERIGAELEKLLVGEHAVEGLEHLVDSGLAEYVLPELP 263
>gi|405982243|ref|ZP_11040565.1| tRNA adenylyltransferase [Actinomyces neuii BVS029A5]
gi|404390014|gb|EJZ85084.1| tRNA adenylyltransferase [Actinomyces neuii BVS029A5]
Length = 500
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LG +D D+ S + L G + D +
Sbjct: 62 GGPVRDAFLGLRPHDFDLTT-----SAHPEQTEALLRKAG----------ANTWDVGRAF 106
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNINTSSV 218
T ++ D ++ R ++Y SR P + +G + E D RRD T+N++ + ++
Sbjct: 107 GTIGGRIGDTVVEITTYRTDEYEVGSRKPQVAYGDSLEGDLTRRDFTVNAMGIRLPDMTL 166
Query: 219 EDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEV 278
D G G+ADL G + TP+ + +F DDPLR++RA RF ++ F + E++ +A
Sbjct: 167 VDPLG-GLADLLAGTLRTPVSAEQSFDDDPLRIMRAARFASQLGFDVAEDVMRAMGEQAE 225
Query: 279 KAALAAKISRERVGTEIDLMVSGNQP---VKAMTH 310
+ ++ +S ER+ E+ ++ G +P ++ MTH
Sbjct: 226 RLSI---VSAERIQAELVRLMVGKRPRAGLELMTH 257
>gi|387128121|ref|YP_006296726.1| Poly(A) polymerase [Methylophaga sp. JAM1]
gi|386275183|gb|AFI85081.1| Poly(A) polymerase [Methylophaga sp. JAM1]
Length = 457
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 134/289 (46%), Gaps = 28/289 (9%)
Query: 35 IFTVNTTRNLGFLRCKA---TMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFN 91
+ ++N+ N F R KA + + E P++VQ D + +L TL+
Sbjct: 1 MLSINSLIN-SFKRIKAGKKSRAAAEGAAPLIVQRSDHNISRQLISPSALKVLYTLKDAG 59
Query: 92 LETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPS 151
E L GG VRD LLG + D DI+ + + + L + F ++
Sbjct: 60 FEAYL--VGGCVRDLLLGYEPKDFDISTNAL------PEQVHRLFRRSQLIGRRFKLVHV 111
Query: 152 NPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFY 211
+ + +E AT + + V+ + +N +GT E+DA+RRD TIN+L+Y
Sbjct: 112 RFGRDEIIEVATFRAPPEAKNHVDKQGRIMQDNV------YGTLEQDAWRRDFTINALYY 165
Query: 212 NINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
NI S+ D TG GIADL+ G I + +DP+R+LRA+RF A+ L+ E ++
Sbjct: 166 NIRDFSIVDYTG-GIADLQAGLIRLIGDKPVRYREDPVRMLRALRFMAKLGLKLEAETEQ 224
Query: 272 AAASDEVKAALAAKISRERVGTE-IDLMVSGNQPVKAMTH--ICGLTLF 317
A L + I R+ E + L +SG A+TH +C +F
Sbjct: 225 LIVD---LAPLLSDIPPARLFDETLKLYLSGQ---AAVTHELLCHYGVF 267
>gi|238759902|ref|ZP_04621057.1| Poly(A) polymerase [Yersinia aldovae ATCC 35236]
gi|238701886|gb|EEP94448.1| Poly(A) polymerase [Yersinia aldovae ATCC 35236]
Length = 448
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 102/237 (43%), Gaps = 30/237 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET---APSGFGVIPSNPD 154
+ GG VRD LLGK D DI E K+ G A FG
Sbjct: 44 LVGGGVRDLLLGKKPKDFDIT--TSATPEQVRKLFRNCRLVGRRFRLAHVMFG------- 94
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR--------FGTAEEDAYRRDLTI 206
+ +E AT + + ED +NS FGT E+DA RRD TI
Sbjct: 95 -PEIIEVATFRGH-----HEQQPAEDSDKNSSQQAQNGMLLRDNIFGTIEDDAQRRDFTI 148
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
NSL+Y I+ ++ D TG G+ DLK G I P+ + +DP+R+LRA+RF A+ D L
Sbjct: 149 NSLYYGISDFALRDYTG-GLRDLKAGIIRLIGSPETRYREDPVRMLRAVRFAAKLDMALS 207
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
E A A+L +I R+ E ++ K +C LF +F L
Sbjct: 208 PE---TAEPIPRLASLLREIPPARLFEESLKLLQSGYGYKTYLKLCEYQLFQPLFPL 261
>gi|302342303|ref|YP_003806832.1| poly(A) polymerase [Desulfarculus baarsii DSM 2075]
gi|301638916|gb|ADK84238.1| poly(A) polymerase [Desulfarculus baarsii DSM 2075]
Length = 425
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LLGK D D+ D G L F ++ ++K +
Sbjct: 54 GGGVRDLLLGKKPKDFDVGTDARPGQ------VRNLFRNSRVIGRRFRLVQVFFQRNKIV 107
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMR-FGTAEEDAYRRDLTINSLFYNINTSSV 218
E +T + R D E+ + FG+ EDA RRDLTIN++FYNI S+
Sbjct: 108 EVSTFR-----------RASDPDEDLVLQANNTFGSPAEDALRRDLTINAMFYNIADFSI 156
Query: 219 EDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
D G G+ DLK G I PK F DP+RV+RA+R AR F L E ++A
Sbjct: 157 VDYVG-GMDDLKAGLIRAVGDPKIRFHRDPVRVMRAVRHAARTGFQLTSETRQA 209
>gi|302036512|ref|YP_003796834.1| hypothetical protein NIDE1150 [Candidatus Nitrospira defluvii]
gi|300604576|emb|CBK40908.1| conserved protein of unknown function, putative Phosphoesterase and
Polynucleotide adenylyltransferase [Candidatus
Nitrospira defluvii]
Length = 891
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 108/226 (47%), Gaps = 21/226 (9%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
V GG+VRD LLG D D+D ++ G FA +A+ + + FG
Sbjct: 493 VVGGFVRDLLLGIDNLDVDFVVEGD-GIAFARALAKERAGRVKVHER-FG---------- 540
Query: 158 HLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
TA + L D + +D R E Y + +PT+ + ++D YRRD TIN+L +N
Sbjct: 541 ---TAVVLLPDGFKVDVATARTEYYEYPTALPTVEQSSIKKDLYRRDFTINTLAVRLNPR 597
Query: 217 SVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ L G DLK +++ L +F++DP RV RAIRF RFDF L +E A
Sbjct: 598 AFGQLIDFYGGQRDLKE-RLIRVL-HSLSFVEDPTRVFRAIRFELRFDFHLSKE-TLALI 654
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIV 320
VK L ++S +R+ E+ + S P A+ + L L +
Sbjct: 655 KGAVKMELFHRLSGQRLLDELRYLFSERTPRHAVRRLADLDLLRFI 700
>gi|395771397|ref|ZP_10451912.1| RNA nucleotidyltransferase [Streptomyces acidiscabies 84-104]
Length = 465
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D E K+ + FG + + D
Sbjct: 29 LALVGGSVRDALLGRLGNDLDFTTDAR--PEAVLKIIRPWADAVWEVGIAFGTVGAQKDG 86
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 87 WQ-------------IEVTTYRSEAYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMALALP 133
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ D G G+ DL + TP P+ +F DDPLR++RA RF A+ DF + E+ A
Sbjct: 134 ERTFIDPHG-GLDDLAARVLRTPGTPEDSFSDDPLRMMRAARFAAQLDFEVAPEVVTAMT 192
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
+ + +S ERV E++ ++ P K +T
Sbjct: 193 DMAERIGI---VSAERVRDELNKLILSAHPRKGLT 224
>gi|296167162|ref|ZP_06849569.1| polyA polymerase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897484|gb|EFG77083.1| polyA polymerase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 478
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNM--MGSEFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD +LG+ D+D D E + A+ L TG FG +
Sbjct: 37 LYLVGGSVRDAVLGRLSPDLDFTTDARPEQVQEILRRWADNLWDTGIE----FGTVGVGK 92
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYN 212
++ ++ R + Y SR P ++FG E+D RRD T N++
Sbjct: 93 GGNR-------------LEITTFRADAYDRVSRKPEVQFGERLEDDLVRRDFTANAMAVR 139
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I + G+A L+ + TP P +F DDPLR+LRA RF A+ F + ++
Sbjct: 140 ITPEGPGEFLDPLGGLAALRQRVLDTPAAPSVSFGDDPLRMLRAARFVAQLGFAVAPRVR 199
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+A E A A+IS ERV E+D ++ G+ PV +
Sbjct: 200 EAI---EEMAPELARISAERVAAELDKLLLGDDPVSGI 234
>gi|238898700|ref|YP_002924381.1| poly(A) polymerase I [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466459|gb|ACQ68233.1| poly(A) polymerase I [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 439
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 104/242 (42%), Gaps = 41/242 (16%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALD-------------NMMGSEFATKVAEYLSATGETAP- 143
+ GG VRD LLGK D DI + ++G F + + T E A
Sbjct: 36 LVGGGVRDLLLGKKPKDFDITTNATPDQVRELFRNCRLIGRRFRLAHIMFGTDTIEVATF 95
Query: 144 -SGFGVIPSNPD-QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYR 201
G+ +N + S M L D N+ FG+ EEDA+R
Sbjct: 96 RGHHGLKSANQNTHSSQRAQNGMLLRD------NI---------------FGSIEEDAHR 134
Query: 202 RDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARF 261
RD T+NSL+Y I ++ D TG G+ D+K G I P+ + +DP+R+LRA+RF A+
Sbjct: 135 RDFTVNSLYYGIADFTLRDYTG-GLKDIKQGLIRLIGDPEIRYPEDPVRMLRAVRFSAKL 193
Query: 262 DFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
D + E K A L ++ R+ E ++ K +C LF ++F
Sbjct: 194 DMAISSETGKPIPRF---AFLLKEVPGARLFEESLKLLQSGHGYKTYLKLCEYQLFPLLF 250
Query: 322 KL 323
L
Sbjct: 251 PL 252
>gi|260888975|ref|ZP_05900238.1| polyA polymerase [Leptotrichia hofstadii F0254]
gi|260861035|gb|EEX75535.1| polyA polymerase [Leptotrichia hofstadii F0254]
Length = 585
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 105/225 (46%), Gaps = 24/225 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRDK+L KD D D A D + SE A Y + + FG++ N + K
Sbjct: 24 LVGGAVRDKILNKDPGDYDFATD-IEYSELKRIFAGY---NPKEMGAHFGILMINVN-GK 78
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPT-MRF-GTAEEDAYRRDLTINSLFYNINT 215
E A R E NSR P ++F T EED RRD TINS+ Y+ T
Sbjct: 79 SYEIAK------------FRKETGVYNSRYPKEIKFVKTIEEDLARRDFTINSIAYSEQT 126
Query: 216 SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
V DL G G D++ I PK +D LR+LRA RF ++ F LD KK A +
Sbjct: 127 GIV-DLYG-GRQDIRRKVIRFVGKPKLRIEEDALRILRAFRFISKLGFNLD---KKTAEA 181
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIV 320
K KIS+ER+ E+ ++ G KA + L + ++
Sbjct: 182 IYKKRKFLTKISKERIFDELSKILMGKFVKKAFIEMKKLRVLEMI 226
>gi|78187013|ref|YP_375056.1| polyA polymerase [Chlorobium luteolum DSM 273]
gi|78166915|gb|ABB24013.1| polyA polymerase family protein [Chlorobium luteolum DSM 273]
Length = 475
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSE--FATKVAEYLSATGETAPSGFGVIPSNPDQ 155
+ GG+VRD L+ + C DIDI + +G FA V + L F +
Sbjct: 25 LVGGYVRDMLMQRPCTDIDIMV---LGDPVPFAKTVQKELGGRNFVLFERF--------R 73
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINT 215
+ LE + ++ V R E Y+ +SR P GT E+D RRD TIN+L +N
Sbjct: 74 TARLELPDPEGATFTLELVGARKESYNHDSRKPITLKGTLEDDLSRRDFTINALALVLNH 133
Query: 216 SS----VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
V+ GR DL+ + TPL P T+ DDPLR++R RF A+ F E
Sbjct: 134 EGRGTIVDQHCGR--EDLEKKILRTPLAPLQTYSDDPLRMMRTARFAAQLGFTPAPEAVA 191
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
A A+ + + +S ER +E ++ +P
Sbjct: 192 AMATMHERIRI---VSAERTSSEFLKIMQSPEP 221
>gi|365827014|ref|ZP_09368890.1| tRNA adenylyltransferase [Actinomyces sp. oral taxon 849 str.
F0330]
gi|365265479|gb|EHM95240.1| tRNA adenylyltransferase [Actinomyces sp. oral taxon 849 str.
F0330]
Length = 492
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LG +D+D+ S + L+A GET D +
Sbjct: 52 GGPVRDAFLGVAPHDLDLTT-----SARPEQTERILAAWGET----------TWDMGRAF 96
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNINTSSV 218
T + ++ R E Y SR P + +G T D RRD T+N++ + +
Sbjct: 97 GTIGARKGSTIVEVTTYRTEAYEVGSRKPRVTYGDTLAGDLTRRDFTVNAMALRLPDLEL 156
Query: 219 EDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEV 278
D G G+ADL G + TP+ + +F DDPLR++RA RF A+ F ++ ++ KA E
Sbjct: 157 IDPCG-GLADLTAGVLRTPVSAEQSFDDDPLRIMRAARFAAQLGFDVEMDVMKAM---ED 212
Query: 279 KAALAAKISRERVGTEIDLMVSGNQPVKAM 308
A+ +S ERV E++ ++ QP + +
Sbjct: 213 MASRLEIVSAERVRAELERLLVSPQPRRGL 242
>gi|409392751|ref|ZP_11244291.1| putative tRNA nucleotidyltransferase [Gordonia rubripertincta NBRC
101908]
gi|403197462|dbj|GAB87525.1| putative tRNA nucleotidyltransferase [Gordonia rubripertincta NBRC
101908]
Length = 480
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D +V+ L G + D
Sbjct: 39 LYLVGGSVRDAVLGRLGNDLDFTTDAR-----PEQVSRLLK----------GWADAFWDV 83
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
T ++ + I+ R + Y + SR P + FG T ++D RRD T+N++ I
Sbjct: 84 GIEFGTVGIRKGEHQIEITTFRADSYDQVSRNPEVTFGETLDDDLIRRDFTVNAMAVRIG 143
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
ED G++ L G + TP P+ +F DDPLR+LRA+RF ++ F L + +A
Sbjct: 144 AKGAEDFCDPLDGMSALLAGVVDTPATPEQSFGDDPLRMLRAVRFISQLGFRLAPRVWQA 203
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
E+ + +I+ ER+ E+D ++ G P++A+
Sbjct: 204 IT--EMNGEI-DRITAERIRAELDKLICGEFPLEAI 236
>gi|238791217|ref|ZP_04634856.1| Poly(A) polymerase [Yersinia intermedia ATCC 29909]
gi|238729350|gb|EEQ20865.1| Poly(A) polymerase [Yersinia intermedia ATCC 29909]
Length = 474
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 102/237 (43%), Gaps = 30/237 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET---APSGFGVIPSNPD 154
+ GG VRD LLGK D DI E K+ G A FG
Sbjct: 69 LVGGGVRDLLLGKKPKDFDITTSAT--PEQVRKLFRNCRLVGRRFRLAHVMFG------- 119
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR--------FGTAEEDAYRRDLTI 206
+ +E AT + + ED +NS FGT E+DA RRD TI
Sbjct: 120 -PEIIEVATFRGH-----HEQQPAEDSDKNSSQQAQNGMLLRDNIFGTIEDDAQRRDFTI 173
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
NSL+Y I+ ++ D TG G+ DLK G I P+ + +DP+R+LRA+RF A+ D +
Sbjct: 174 NSLYYGISDFALRDYTG-GLRDLKEGIIRLIGDPETRYREDPVRMLRAVRFAAKLDMTIS 232
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
E A A+L +I R+ E ++ K +C LF +F L
Sbjct: 233 PE---TAEPIPRLASLLHEIPPARLFEESLKLLQSGYGYKTYLKLCEYQLFQPLFPL 286
>gi|440694991|ref|ZP_20877555.1| tRNA adenylyltransferase [Streptomyces turgidiscabies Car8]
gi|440282923|gb|ELP70310.1| tRNA adenylyltransferase [Streptomyces turgidiscabies Car8]
Length = 466
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D E K+ + FG + + D
Sbjct: 30 LALVGGSVRDALLGRLGNDLDFTTDAR--PEDVLKIVRPWADAVWDVGIAFGTVGAQKD- 86
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 87 ------------GFLIEVTTYRSEAYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMAVALP 134
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G DL + TP P+ +F DDPLR++RA RF A+ DF + E+ A
Sbjct: 135 EKVFIDPHG-GREDLARRVLRTPGTPEESFSDDPLRMMRAARFAAQLDFEVASEVVTAMT 193
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
A +S ERV E++ ++ P K +T
Sbjct: 194 D---MAGRIEIVSAERVRDELNKLILSAHPRKGLT 225
>gi|225174850|ref|ZP_03728847.1| CBS domain containing protein [Dethiobacter alkaliphilus AHT 1]
gi|225169490|gb|EEG78287.1| CBS domain containing protein [Dethiobacter alkaliphilus AHT 1]
Length = 873
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 22/248 (8%)
Query: 78 KIFSCLLNTLRHFNLETVLRVA-GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLS 136
KI S LL + + E V A GG++RD LL +D+D+ ++ FA ++ + L
Sbjct: 456 KIQSLLLLVAQKADKENVKVFAVGGFIRDLLLNIKNHDLDLVVEPA-AIPFAEELNKMLG 514
Query: 137 ATGETAPSGFGVIPSNPDQSKHLETATMKLYD-LWIDFVNLRCEDYSENSRIPTMRFGTA 195
T+ FG TA++ L + + ID V R E Y+ + +P + +
Sbjct: 515 GR-LTSHEKFG-------------TASIVLPEGIHIDLVTSRQEFYARPAALPEVEQSSL 560
Query: 196 EEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLR 253
+ D +RRD TIN+L ++N+ L GI DL+ G I +F++DPLRVLR
Sbjct: 561 KNDLFRRDFTINTLACSLNSPGFGKLIDLFNGIGDLEKGLIRVLY--NLSFVEDPLRVLR 618
Query: 254 AIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICG 313
AIRF RF F L EE + + + + K+S+ER+ E+ L + + + +
Sbjct: 619 AIRFEQRFGFRL-EETTLSLMENAAQTRVLEKVSKERLHDELVLALQEEKAPEILIRYFT 677
Query: 314 LTLFWIVF 321
L + ++F
Sbjct: 678 LNIAPMIF 685
>gi|210633527|ref|ZP_03297796.1| hypothetical protein COLSTE_01712 [Collinsella stercoris DSM 13279]
gi|210159122|gb|EEA90093.1| HDIG domain protein [Collinsella stercoris DSM 13279]
Length = 452
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 83 LLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETA 142
+L L LE + GGWVRD L+ +DIDI A AE ++ +
Sbjct: 1 MLRVLESAGLEAW--IVGGWVRDALMCAPGHDIDICCSGSWEQSAAALRAEGIAVV--ES 56
Query: 143 PSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIP--TMRFGTAEEDAY 200
FG I + D + I+ R + + + R P R EED
Sbjct: 57 GVKFGGITAVLDGER-------------IEVTAYRLDGFYTDGRHPESVRRAQCVEEDLA 103
Query: 201 RRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGAR 260
RRD T+N++ ++ ++ GRG DL+ +I P+ F +D LR+LRA+RF R
Sbjct: 104 RRDFTVNAMAWHPRRGLLDLYDGRG--DLERRQIRAVGEPRRRFEEDALRMLRAVRFACR 161
Query: 261 FDFILDEELKKAAASDEVKAALAAKISRERVGTEID-LMVSGN 302
DF +D A+A D A L ++RERVG E++ ++V+G
Sbjct: 162 LDFSMDA--ATASALDSC-APLLDAVARERVGIELEGILVTGR 201
>gi|397668931|ref|YP_006510466.1| CCA tRNA nucleotidyltransferase [Propionibacterium propionicum
F0230a]
gi|395142691|gb|AFN46798.1| CCA tRNA nucleotidyltransferase [Propionibacterium propionicum
F0230a]
Length = 481
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG +D+D + E + ++ AT + FG I + +
Sbjct: 36 LYLVGGSVRDAMLGGLGHDLDFTT-SARPEETHAILRDFTPATWDIG-RDFGTIGAMKKE 93
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ I+ R + Y SR P + FG EED RRD T+N++ +I
Sbjct: 94 GGK---------EWQIEVTTFRADAYEPGSRKPVVAFGERIEEDLVRRDFTVNAMAVDIV 144
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL G + TP P + +F DDPLR++RA RF +R F + E++ A
Sbjct: 145 AGEFVDPWG-GLRDLADGVLRTPAPAEVSFGDDPLRMMRAARFASRLGFRVAPEVQDAMR 203
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+ + +S ERV E+ ++ + P + +
Sbjct: 204 EMAERITI---VSAERVQAELTGLLLTDSPREGL 234
>gi|238786773|ref|ZP_04630574.1| Poly(A) polymerase [Yersinia frederiksenii ATCC 33641]
gi|238725141|gb|EEQ16780.1| Poly(A) polymerase [Yersinia frederiksenii ATCC 33641]
Length = 521
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 103/237 (43%), Gaps = 30/237 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET---APSGFGVIPSNPD 154
+ GG VRD LLGK D DI E K+ G A FG
Sbjct: 116 LVGGGVRDLLLGKKPKDFDIT--TSATPEQVRKLFRNCRLVGRRFRLAHVMFG------- 166
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR--------FGTAEEDAYRRDLTI 206
+ +E AT + + + ED +NS FGT E+DA RRD TI
Sbjct: 167 -PEIIEVATFRGH-----HEQQQAEDSDKNSSQQAQNGMLLRDNIFGTIEDDAQRRDFTI 220
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
NSL+Y I+ ++ D TG G+ DLK G I P+ + +DP+R+LRA+RF A+ D +
Sbjct: 221 NSLYYGISDFALRDYTG-GLRDLKEGIIRLIGDPETRYREDPVRMLRAVRFAAKLDMSIS 279
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
E A A+L +I R+ E ++ K +C LF +F L
Sbjct: 280 AE---TAEPIPRLASLLHEIPPARLFEESLKLLQSGYGYKTYLKLCEYQLFQPLFPL 333
>gi|418467941|ref|ZP_13038794.1| RNA nucleotidyltransferase [Streptomyces coelicoflavus ZG0656]
gi|371551434|gb|EHN78729.1| RNA nucleotidyltransferase [Streptomyces coelicoflavus ZG0656]
Length = 499
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + + + A E + FG +
Sbjct: 60 LALVGGSVRDALLGRLGNDLDFTTD-ARPQDVLKIMRPWADAVWEVGIA-FGTVGGQKGG 117
Query: 156 SKHLETATMKLYDLW-IDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNI 213
W I+ R E Y SR P + +G + EED RRD T+N++ +
Sbjct: 118 --------------WQIEVTTYRSEAYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMAVAL 163
Query: 214 NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
D G G+ DL G + TP P+ +F DDPLR++RA RF A+ DF + E+ KA
Sbjct: 164 PEKVFIDPHG-GLDDLAAGVLRTPGTPEDSFSDDPLRMMRAARFAAQLDFEVAPEVVKAM 222
Query: 274 ASDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAMT 309
+A +I S ERV E++ ++ P K ++
Sbjct: 223 QD------MAGRIDIVSAERVRDELNKLILSAHPRKGLS 255
>gi|302871533|ref|YP_003840169.1| polynucleotide adenylyltransferase [Caldicellulosiruptor
obsidiansis OB47]
gi|302574392|gb|ADL42183.1| Polynucleotide adenylyltransferase region [Caldicellulosiruptor
obsidiansis OB47]
Length = 394
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 95/199 (47%), Gaps = 25/199 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG +RD LL K+ D DIA D K + + +T P+G K
Sbjct: 24 LVGGCLRDYLLSKEPQDFDIATD--------AKPEDVIHLFEKTIPTGI----------K 65
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRF-GTAEEDAYRRDLTINSLFYNINTS 216
H T T+ + + I+ R E EN R P + F + ED RRD TIN++ Y+ +
Sbjct: 66 H-GTVTVIINGVKIEVTTFRVEKEYENHRWPKVEFTNSLFEDLRRRDFTINAMAYHPDEG 124
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
+ D G GI DLK+ + P F +D LR+LR IRF + F++D E +A S
Sbjct: 125 LI-DYFG-GIEDLKNKIVRCVGNPHERFFEDALRILRCIRFATQLSFVIDNETFEALKS- 181
Query: 277 EVKAALAAKISRERVGTEI 295
L KIS+ER+ E+
Sbjct: 182 --LKDLLKKISKERINIEL 198
>gi|304316792|ref|YP_003851937.1| polynucleotide adenylyltransferase region [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778294|gb|ADL68853.1| Polynucleotide adenylyltransferase region [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 394
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 30/220 (13%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG++RDK+L + DIDI ++ G +A + + L+ E +
Sbjct: 22 IVGGYIRDKILNLESNDIDITVEGD-GIRYALMLNKILNGKIEI--------------HE 66
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSS 217
+TA ++ D V+ R E Y+ + +P + ED RRD TIN L ++I
Sbjct: 67 KFKTAKIQADKYTFDVVSARKEYYTHSGILPDVELADIVEDIKRRDFTINMLAFDIKEGM 126
Query: 218 VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE----LKKAA 273
+ DL G+ D+K+ K++ + K+ F DDP R+ RA+R+ R DF L+ LK++
Sbjct: 127 IIDLCN-GLDDIKN-KLIRVVHDKS-FNDDPTRIFRALRYSVRLDFKLEPHTELLLKQSI 183
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQP---VKAMTH 310
A+ + +S +R+ EI L++S P VK M H
Sbjct: 184 ANGDF-----DNLSTDRIMNEIYLILSEKNPETIVKLMKH 218
>gi|410631566|ref|ZP_11342241.1| poly(A) polymerase [Glaciecola arctica BSs20135]
gi|410149012|dbj|GAC19108.1| poly(A) polymerase [Glaciecola arctica BSs20135]
Length = 447
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 29/282 (10%)
Query: 59 PRPVVVQVRDKIELTDTETKIFSCLLNTL-RHFNLETVLRVAGGWVRDKLLGKDCYDIDI 117
P +V V + E T + + L L R N + GG VRD LLGK+ D D+
Sbjct: 9 PAALVATVIPRAEHTVSRNSMSENALKVLYRLHNSGYQAYLVGGCVRDVLLGKEPKDFDV 68
Query: 118 ---ALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFV 174
A + F + + A FG + +E AT + + D
Sbjct: 69 TTNATPEQIKGLF--RNCRLIGRRFRLAHIVFG--------REIIEVATFRGHHENNDEG 118
Query: 175 NLRCEDYSENSRIPTMR---FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKH 231
+ +S++ ++ +R FG+ EEDA RRD TIN+++YNI S+ D G G+ +K
Sbjct: 119 ESKVSKHSDHGQL--LRDNVFGSIEEDAQRRDFTINAMYYNIADYSISDFAG-GMQAIKD 175
Query: 232 GKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVK--AALAAKISRE 289
I P+ + +DP+R+LRA+RF A+ D + EE +++ +K A L A I
Sbjct: 176 KSIRLIGDPETRYREDPVRMLRAVRFAAKLDMHISEE-----SAEPIKRLAPLMANIPAA 230
Query: 290 RVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFK--LPLQVEP 329
R+ EI ++ Q + + LF +F PL ++P
Sbjct: 231 RLFEEILKLLLSGQGLATYKLLAEFHLFEALFPQLAPLLLQP 272
>gi|270291287|ref|ZP_06197509.1| CCA-adding enzyme [Pediococcus acidilactici 7_4]
gi|270280133|gb|EFA25969.1| CCA-adding enzyme [Pediococcus acidilactici 7_4]
Length = 402
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LLGK +D+DIA S + ++ + T +T V+ + S +
Sbjct: 32 GGSVRDTLLGKPIHDVDIAT-----SAYPAEIKQIFKRTVDTGIEHGTVMVLTGEHSYEI 86
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMR--FGTAEEDAYRRDLTINSLFYNINTSS 217
T R E ++ R P + +ED RRD TIN+ + +
Sbjct: 87 TT--------------FRTESGYQDFRRPDQVTFVRSLKEDLMRRDFTINAFALREDRTV 132
Query: 218 VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDE 277
++ G + DLK KI PKA F +D LR++R +RF ++ DF+++ + A+ +
Sbjct: 133 IDVFDG--LTDLKQHKIRAVGDPKARFHEDALRMMRGVRFASQLDFVIEPQ---TLAAIK 187
Query: 278 VKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTL 316
+ ++L AKIS ER E M+ G P + + + L
Sbjct: 188 MNSSLLAKISVERTLVEFQKMMLGTNPNRGLADMVATRL 226
>gi|268318089|ref|YP_003291808.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Rhodothermus marinus DSM 4252]
gi|262335623|gb|ACY49420.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Rhodothermus marinus DSM 4252]
Length = 561
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 28/254 (11%)
Query: 60 RPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRV--AGGWVRDKLLGKDCYDID- 116
RP+ +++++++ ++ ++ LL + + + V GG VRD L + DID
Sbjct: 15 RPLPLRIQERLA-----SRPYAPLLRRIGELGQQHEIPVYAVGGVVRDLFLDRPTTDIDF 69
Query: 117 IALDNMMGSEFATKVAEYLSATGETAPSGFGV----IPSNPDQSKHLETATMKLYDLWID 172
+ + G A VA L FG +P+ PD+S ++
Sbjct: 70 VTVGPGTGIRLARLVARALGGRTVHVYENFGTAAIRVPT-PDRSGVF----------VLE 118
Query: 173 FVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLK 230
FV R E Y ++SR P + GT ++D RRD TIN++ ++ S L G DL+
Sbjct: 119 FVAARRESYRKDSRKPIVEDGTLDDDLRRRDFTINAMAIDLWPSRWGTLIDPFHGRRDLR 178
Query: 231 HGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRER 290
+ TPL P+ TF DDPLR++RA RF A+ +F ++ + A+ KA +S+ER
Sbjct: 179 QRLLRTPLDPRQTFEDDPLRMIRAARFAAQLNFRVEPD---TFAAMREKAHRVEILSQER 235
Query: 291 VGTEIDLMVSGNQP 304
+ E+ ++ QP
Sbjct: 236 ITDELQKILCAPQP 249
>gi|288921203|ref|ZP_06415489.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Frankia sp. EUN1f]
gi|288347410|gb|EFC81701.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Frankia sp. EUN1f]
Length = 491
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 98/228 (42%), Gaps = 18/228 (7%)
Query: 95 VLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPD 154
L + GG VRD LLG+ D+ E ++ + A FG
Sbjct: 38 ALYLVGGSVRDSLLGRAQSAPDLDFTTDARPERVLEITRGWAEATWEAGIAFG------- 90
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNI 213
T + + + R E Y SR PT+ +G D RRD T+N++ ++
Sbjct: 91 ------TVGLARRGVRFEVTTYRSETYDRTSRNPTVTYGDGLHGDLVRRDFTVNAMAVSV 144
Query: 214 NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAA 273
DL G G+ADL G + TP P+A+F DDPLR+LRA RF A EL A
Sbjct: 145 PGHDFVDLFG-GMADLARGVLRTPGVPEASFDDDPLRILRAARFEAALGLTPVPELVAAM 203
Query: 274 ASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
S +A +S ERV E+ +++ P+ + + + + IV
Sbjct: 204 RS---RAERIKIVSPERVRDELRKLIASPNPIAGLERLVDVGIADIVL 248
>gi|345304379|ref|YP_004826281.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Rhodothermus marinus SG0.5JP17-172]
gi|345113612|gb|AEN74444.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Rhodothermus marinus SG0.5JP17-172]
Length = 552
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 28/254 (11%)
Query: 60 RPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRV--AGGWVRDKLLGKDCYDID- 116
RP+ +++++++ ++ ++ LL + + + V GG VRD L + DID
Sbjct: 6 RPLPLRIQERLA-----SRPYAPLLRRIGELGQQHEIPVYAVGGVVRDLFLDRPTTDIDF 60
Query: 117 IALDNMMGSEFATKVAEYLSATGETAPSGFGV----IPSNPDQSKHLETATMKLYDLWID 172
+ + G A VA L FG +P+ PD+S ++
Sbjct: 61 VTVGPGTGIRLARLVARALGGRTVHVYENFGTAAIRVPT-PDRSGVF----------VLE 109
Query: 173 FVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG--RGIADLK 230
FV R E Y ++SR P + GT ++D RRD TIN++ ++ S L G DL+
Sbjct: 110 FVAARRESYRKDSRKPIVEDGTLDDDLRRRDFTINAMAIDLWPSRWGTLIDPFHGRRDLR 169
Query: 231 HGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRER 290
+ TPL P+ TF DDPLR++RA RF A+ +F ++ + A+ KA +S+ER
Sbjct: 170 QRLLRTPLDPRQTFEDDPLRMIRAARFAAQLNFRVEPD---TFAAMREKAHRVEILSQER 226
Query: 291 VGTEIDLMVSGNQP 304
+ E+ ++ QP
Sbjct: 227 ITDELQKILCAPQP 240
>gi|238750543|ref|ZP_04612043.1| Poly(A) polymerase [Yersinia rohdei ATCC 43380]
gi|238711191|gb|EEQ03409.1| Poly(A) polymerase [Yersinia rohdei ATCC 43380]
Length = 473
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 102/237 (43%), Gaps = 30/237 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET---APSGFGVIPSNPD 154
+ GG VRD LLGK D DI E K+ G A FG
Sbjct: 69 LVGGGVRDLLLGKKPKDFDITTSAT--PEQVRKLFRNCRLVGRRFRLAHVMFG------- 119
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR--------FGTAEEDAYRRDLTI 206
+ +E AT + + ED +NS FGT E+DA RRD TI
Sbjct: 120 -PEIIEVATFRGH-----HEQQPAEDSDKNSSQQAQNGMLLRDNIFGTIEDDAQRRDFTI 173
Query: 207 NSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
NSL+Y I+ ++ D TG G+ DLK G I P+ + +DP+R+LRA+RF A+ D +
Sbjct: 174 NSLYYGISDFALRDYTG-GLRDLKEGIIRLIGDPETRYREDPVRMLRAVRFAAKLDMTIS 232
Query: 267 EELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKL 323
E A A+L +I R+ E ++ K +C LF +F L
Sbjct: 233 PE---TAEPIPRLASLLHEIPPARLFEESLKLLQSGYGYKTYLKLCEYQLFQPLFPL 286
>gi|406834034|ref|ZP_11093628.1| polynucleotide adenylyltransferase [Schlesneria paludicola DSM
18645]
Length = 413
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 107/226 (47%), Gaps = 24/226 (10%)
Query: 99 AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETA-PSGFGVIPS-NPDQS 156
AGG VRD LLG++ D D+A + +V E A + FGVI P +
Sbjct: 28 AGGCVRDLLLGRESNDFDVAT-----TARPNEVRELFGHRRTLAVGASFGVIVVIGPPEL 82
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
H+E AT + DL DY + R + F + EEDA RRD TIN +F++
Sbjct: 83 GHVEVATFR-TDL----------DYVDGRRPEGIAFCSPEEDALRRDFTINGMFFDPIDE 131
Query: 217 SVEDLTGRGIADLKHGKIVTPL-PPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
V D G G DLK G++V + P +D LR+LRA+RF A DF LD A A
Sbjct: 132 RVIDYVG-GEEDLK-GRLVRAIGDPHDRMREDKLRMLRAVRFTAILDFSLDP--ITADAI 187
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
++ + L +S ER+ E+ M+ +A+ + L I+
Sbjct: 188 RQMSSELVV-VSAERIAQELKKMLVDRNRRRAVELSEDMLLLRIIL 232
>gi|404445713|ref|ZP_11010846.1| metal dependent phosphohydrolase [Mycobacterium vaccae ATCC 25954]
gi|403651690|gb|EJZ06795.1| metal dependent phosphohydrolase [Mycobacterium vaccae ATCC 25954]
Length = 490
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 102/231 (44%), Gaps = 21/231 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGS--EFATKVAEYLSATGETAPSGFGVIPSNP 153
L + GG VRD LLG+ D+D D F + L TG + GV P
Sbjct: 42 LYLVGGSVRDALLGRLGTDLDFTTDARPDEMLRFLRGWGDALWDTGIDFGT-VGVAKGPP 100
Query: 154 DQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYN 212
LE T R + Y + SR P +R+G +D RRD T+N++
Sbjct: 101 GNQDRLEITT------------FRADTYDQVSRNPEVRYGDNLADDLVRRDFTVNAMAVR 148
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELK 270
I + G++ L+ + TP P+ +F DDPLR+LRA RF ++ F + ++
Sbjct: 149 ITADGAAEFLDPLDGLSALRRKVLDTPSAPEVSFGDDPLRMLRAARFVSQLGFDVAPRVR 208
Query: 271 KAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+A E A +I+ ERV E+D M+ G PV + + L +V
Sbjct: 209 QAL---EEMAPQLGRITAERVAAELDKMLLGADPVAGVDLMVQTGLGEVVL 256
>gi|77164400|ref|YP_342925.1| Poly(A) polymerase, PcnB [Nitrosococcus oceani ATCC 19707]
gi|254434825|ref|ZP_05048333.1| poly(A) polymerase subfamily [Nitrosococcus oceani AFC27]
gi|76882714|gb|ABA57395.1| Poly(A) polymerase, PcnB [Nitrosococcus oceani ATCC 19707]
gi|207091158|gb|EDZ68429.1| poly(A) polymerase subfamily [Nitrosococcus oceani AFC27]
Length = 401
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 24/172 (13%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALD---NMMGSEFATKVAEYLSATGETAPSGFGVIPSNPD 154
+ GG VRD LLG++ D D+ D + F + + A FG
Sbjct: 14 LVGGCVRDLLLGREPKDFDVTTDARPEQIRDLF--RSCRLVGRRFRLAHLRFG------- 64
Query: 155 QSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR-FGTAEEDAYRRDLTINSLFYNI 213
+ +ETAT F E SEN RI + +GT E+DA+RRD ++N+L+YNI
Sbjct: 65 -REIIETAT---------FRGPPEEGLSENGRIVSDNVYGTLEQDAWRRDFSVNALYYNI 114
Query: 214 NTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFIL 265
SV D T RG+ DL+ G++ P + +DP+R+LRA+RF A+ F L
Sbjct: 115 RDFSVVDYT-RGMEDLEAGRLRLIGDPVTRYREDPVRMLRAVRFAAKLGFTL 165
>gi|403739989|ref|ZP_10952280.1| putative tRNA nucleotidyltransferase [Austwickia chelonae NBRC
105200]
gi|403190379|dbj|GAB79050.1| putative tRNA nucleotidyltransferase [Austwickia chelonae NBRC
105200]
Length = 479
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 112/242 (46%), Gaps = 37/242 (15%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LG+ D+D+ + + E S T A + + D
Sbjct: 19 LALVGGPVRDAFLGRGSLDLDLTT--------SARPEEIESITSRWADAQW-------DM 63
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
+ T ++ D ++ R + Y SR P + FG +D RRD T+N++ +
Sbjct: 64 GRAFGTIGLRKVDQTVEITTYRADAYDGASRKPVVAFGDNLVDDLVRRDFTVNAMALRLP 123
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA-- 272
D G G+ DL ++ TP P + +F DDPLR++RA RF A+ F LD +++A
Sbjct: 124 ALEFVDPHG-GLEDLAARRLRTPGPAEVSFGDDPLRMMRAARFVAQLGFELDPAVREAMC 182
Query: 273 --AASDEVKAALAAKISRERVGTEID-LMVSGNQPVKAMTHICGLTLFWIVFKLPLQVEP 329
AAS E+ +S ER+ E + LMVS + + G+ F + L QV P
Sbjct: 183 QMAASLEI-------VSAERIRDEFNKLMVSADP-------VAGIRAF-VDTGLATQVMP 227
Query: 330 EV 331
E+
Sbjct: 228 EL 229
>gi|301336247|ref|ZP_07224449.1| polyA polymerase [Chlamydia muridarum MopnTet14]
Length = 410
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 22/222 (9%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LL + ++DIA N + T + LS + FG+I + +
Sbjct: 27 GGSVRDMLLDRPIEEVDIA-TNASPTIVTTIFPDTLSIG-----AAFGIIAVK-ENGQLF 79
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVE 219
E AT + EDY++ + F + ++DA RRD TIN ++Y+ +
Sbjct: 80 EVATFR-----------SDEDYADGRHPNRVIFASMKDDAIRRDFTINGMYYDPFEEKLF 128
Query: 220 DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVK 279
DL G ADL+ + PK FL+D LR+LRAIRF A F LD + + A +
Sbjct: 129 DLV-EGRADLERKVVRAIGHPKQRFLEDKLRILRAIRFAATLGFSLDPKTEIAIIKE--A 185
Query: 280 AALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+L +S ER+ E+ M+ P +++ + L + I+F
Sbjct: 186 PSLPTSVSPERIWQELKKMLR-KAPYESLQLLIKLKVLPIIF 226
>gi|427439244|ref|ZP_18923986.1| CCA-adding enzyme [Pediococcus lolii NGRI 0510Q]
gi|425788622|dbj|GAC44774.1| CCA-adding enzyme [Pediococcus lolii NGRI 0510Q]
Length = 402
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LLGK +D+DIA S + ++ + T +T V+ + S +
Sbjct: 32 GGSVRDTLLGKPIHDVDIAT-----SAYPAEIKQIFKRTVDTGIEHGTVMVLTGEHSYEI 86
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMR--FGTAEEDAYRRDLTINSLFYNINTSS 217
T R E ++ R P + +ED RRD TIN+ + +
Sbjct: 87 TT--------------FRTESGYQDFRRPDQVTFVRSLKEDLMRRDFTINAFALREDRTV 132
Query: 218 VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDE 277
++ G + DLK KI PKA F +D LR++R +RF ++ DF+++ + A+ +
Sbjct: 133 IDVFDG--LTDLKQHKIRAVGDPKARFHEDALRMMRGVRFASQLDFVIEPQ---TLAAIK 187
Query: 278 VKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTL 316
+ ++L AKIS ER E M+ G P + + + L
Sbjct: 188 MNSSLLAKISVERTLVEFQKMMLGTNPNRGLADMVATRL 226
>gi|304385035|ref|ZP_07367381.1| poly A polymerase [Pediococcus acidilactici DSM 20284]
gi|304329229|gb|EFL96449.1| poly A polymerase [Pediococcus acidilactici DSM 20284]
Length = 402
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LLGK +D+DIA S + ++ + T +T V+ + S +
Sbjct: 32 GGSVRDTLLGKPIHDVDIAT-----SAYPAEIKQIFKRTVDTGIEHGTVMVLTGEHSYEI 86
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMR--FGTAEEDAYRRDLTINSLFYNINTSS 217
T R E ++ R P + +ED RRD TIN+ + +
Sbjct: 87 TT--------------FRTESGYQDFRRPDQVTFVRSLKEDLMRRDFTINAFALREDRTV 132
Query: 218 VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDE 277
++ G + DLK KI PKA F +D LR++R +RF ++ DF+++ + A+ +
Sbjct: 133 IDVFDG--LTDLKQQKIRAVGDPKARFHEDALRMMRGVRFASQLDFVIEPQ---TLAAIK 187
Query: 278 VKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTL 316
+ ++L AKIS ER E M+ G P + + + L
Sbjct: 188 MNSSLLAKISVERTLVEFQKMMLGTNPNRGLADMVATRL 226
>gi|348175259|ref|ZP_08882153.1| poly(A) polymerase [Saccharopolyspora spinosa NRRL 18395]
Length = 497
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 99/220 (45%), Gaps = 32/220 (14%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D + +V E L+ ET D
Sbjct: 52 LYLVGGSVRDALLGRLGTDLDFTTEAR-----PEQVRELLTGWAETIW----------DT 96
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
T + ++ R + Y R P + FG T E D RRD T+N++ +
Sbjct: 97 GIQFGTLGAYRHGTTVEITTFRADTYDRVGRNPDVAFGDTIEGDLVRRDFTVNAMAIELP 156
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
S DL G G+ADL ++ TP P+ +F DDPLR+LRA RF ++ F A
Sbjct: 157 GRSFVDLHG-GMADLVDRRLDTPAAPEDSFADDPLRMLRAARFVSQLGFT---------A 206
Query: 275 SDEVKAALA------AKISRERVGTEIDLMVSGNQPVKAM 308
+D V A+ A+++ ERV E+ ++ G P + +
Sbjct: 207 ADRVVTAMTDMATEIARVTPERVQVELSKLLCGEFPRRGI 246
>gi|221133901|ref|ZP_03560206.1| poly(A) polymerase I [Glaciecola sp. HTCC2999]
Length = 443
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 58 PPRPVVVQVRDKIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDI 117
PP V+ Q I + D +L L E L GG VRD LL + D DI
Sbjct: 12 PPMKVITQNEHNIRVEDISVNAVK-VLRRLNAAGFEAYL--VGGCVRDLLLNQHPKDFDI 68
Query: 118 ALD---NMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFV 174
A D + ++F K + A FG + +E AT + +
Sbjct: 69 ATDATPEQIKAQF--KNCRIIGRRFRLAHVVFG--------REIIEVATFRGPHIQDKNT 118
Query: 175 NLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKI 234
+ + + E + FGT E+DA RRD TIN+++YN+ ++ D G GI ++ I
Sbjct: 119 SDKSKKDGEGQLVRDNVFGTLEQDAARRDFTINAMYYNVVDGTIRDFAG-GIDSIEEKTI 177
Query: 235 VTPLPPKATFLDDPLRVLRAIRFGARFDFILDE 267
P+ + +DP+R++RA+RF A+ D +DE
Sbjct: 178 SLIGDPETRYREDPVRMIRAVRFAAKLDMTIDE 210
>gi|262037488|ref|ZP_06010947.1| tRNA adenylyltransferase [Leptotrichia goodfellowii F0264]
gi|261748418|gb|EEY35798.1| tRNA adenylyltransferase [Leptotrichia goodfellowii F0264]
Length = 586
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD + GK+ YD D A D + E ++ + S A G +I N K
Sbjct: 24 LVGGAVRDLITGKEPYDYDFATD--IEYEKLKEIFKNFSPKEVGAHFGILIIKVN---GK 78
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIP-TMRF-GTAEEDAYRRDLTINSLFYNINT 215
H E A R E NSR P +++F T EED RRD T+N++ YN
Sbjct: 79 HYEIAK------------FRKETGVLNSRHPKSVKFIDTIEEDLSRRDFTVNAMAYN-EI 125
Query: 216 SSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAAS 275
+ DL G G D+++ I PK +D LR++RA RF ++ F LD KK + +
Sbjct: 126 RGLIDLFG-GKKDIENRIIRFVGKPKIRIEEDALRIMRAFRFISQLGFKLD---KKTSEA 181
Query: 276 DEVKAALAAKISRERVGTEIDLMVSGNQPVKA--MTHICGL 314
+K KIS+ER+ TE+ +++G +A M CG+
Sbjct: 182 IYLKKKFLNKISKERIFTELSRILTGPCMKRALRMMKKCGV 222
>gi|225848944|ref|YP_002729108.1| poly A polymerase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644590|gb|ACN99640.1| poly A polymerase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 845
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 37/246 (15%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGS--EFATKVAEYLSATGETAP---SGFGVIPSN 152
+ GG VRD +LGK DIDI ++ GS + + A+ + T P +G V P+
Sbjct: 463 IIGGVVRDIVLGKQSLDIDIIVE---GSAIDLIKRYAKENNLTYHVYPEFMTGNIVFPNG 519
Query: 153 PDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYN 212
L +DF R E+Y P + T ED YRRD TIN+L
Sbjct: 520 ----------------LKLDFATARKEEYDSPGSYPKVEKATLFEDLYRRDFTINTLAIE 563
Query: 213 INTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEE-- 268
I S+ L G+ D+K +I + +F++DP+R+LRA+RF R +F L+++
Sbjct: 564 ITYSNFGKLIDYFNGLVDIKEKRI--RILHTLSFVEDPIRILRALRFAGRLEFKLEKKTE 621
Query: 269 --LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVFKLPLQ 326
LK A D + A R+ E++L + + + + + + +F + L
Sbjct: 622 SLLKHAVEKDLLNFAPTG-----RINLELNLTFKEEKVLDILKLMDKYKVLYKLFGITLD 676
Query: 327 VEPEVL 332
E E L
Sbjct: 677 KEKEKL 682
>gi|15834702|ref|NP_296461.1| poly(A) polymerase family protein [Chlamydia muridarum Nigg]
gi|270284868|ref|ZP_06194262.1| polyA polymerase [Chlamydia muridarum Nigg]
gi|270288895|ref|ZP_06195197.1| polyA polymerase [Chlamydia muridarum Weiss]
gi|7190112|gb|AAF38959.1| poly(A) polymerase family protein [Chlamydia muridarum Nigg]
Length = 410
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 22/222 (9%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LL + ++DIA N + T + LS + FG+I + +
Sbjct: 27 GGSVRDMLLDRPIEEVDIA-TNASPTIVTTIFPDTLSIG-----AAFGIIAVK-ENGQLF 79
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVE 219
E AT + EDY++ + F + ++DA RRD TIN ++Y+ +
Sbjct: 80 EVATFR-----------SDEDYADGRHPNRVIFASMKDDAIRRDFTINGMYYDPFEEKLF 128
Query: 220 DLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVK 279
DL G ADL+ + PK FL+D LR+LRAIRF A F LD + + A +
Sbjct: 129 DLV-EGRADLERKVVRAIGHPKQRFLEDKLRILRAIRFAATLGFSLDPKTEIAIIKE--A 185
Query: 280 AALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF 321
+L +S ER+ E+ M+ P +++ + L + I+F
Sbjct: 186 PSLPTSVSPERIWQELKKMLR-KAPYESLQLLIKLKVLPIIF 226
>gi|418069320|ref|ZP_12706598.1| tRNA nucleotidyltransferase/poly(A) polymerase [Pediococcus
acidilactici MA18/5M]
gi|357536789|gb|EHJ20817.1| tRNA nucleotidyltransferase/poly(A) polymerase [Pediococcus
acidilactici MA18/5M]
Length = 402
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 100 GGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHL 159
GG VRD LLGK +D+DIA S + ++ + T +T V+ + S +
Sbjct: 32 GGSVRDTLLGKPIHDVDIAT-----SAYPAEIKQIFKRTVDTGIEHGTVMVLTGEHSYEI 86
Query: 160 ETATMKLYDLWIDFVNLRCEDYSENSRIPTMR--FGTAEEDAYRRDLTINSLFYNINTSS 217
T R E ++ R P + +ED RRD TIN+ + +
Sbjct: 87 TT--------------FRTESGYQDFRRPDQVTFVRSLKEDLMRRDFTINAFALREDRTI 132
Query: 218 VEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASDE 277
++ G + DLK KI PKA F +D LR++R +RF ++ DF+++ + A+ +
Sbjct: 133 IDVFDG--LTDLKQQKIRAVGDPKARFHEDALRMMRGVRFASQLDFVIEPQ---TLAAIK 187
Query: 278 VKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTL 316
+ ++L AKIS ER E M+ G P + + + L
Sbjct: 188 MNSSLLAKISVERTLVEFQKMMLGTNPNRGLADMVATRL 226
>gi|317128267|ref|YP_004094549.1| CBS domain containing protein [Bacillus cellulosilyticus DSM 2522]
gi|315473215|gb|ADU29818.1| CBS domain containing protein [Bacillus cellulosilyticus DSM 2522]
Length = 864
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 88 RHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFG 147
+H N+ L GG VRD LL + D+DI ++ G +FAT + E FG
Sbjct: 467 QHLNMRAYL--IGGMVRDLLLQRPNEDVDIVVEGD-GMKFATYLQE-----------KFG 512
Query: 148 VIPSNPDQSKHLETATMKL-YDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTI 206
+ +TAT K +L ID + R E Y + +P + T +ED YRRD TI
Sbjct: 513 ---GQVRLHEEFKTATWKHPNNLKIDVTSARTEFYDFPAALPKVEMSTMKEDLYRRDFTI 569
Query: 207 NSLFYNINTSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFI 264
N++ ++ L +G DL + KI + +F++DP R+LRA+RF RF F
Sbjct: 570 NAMGIALHKDQFGVLIDYFQGYNDLLNKKI--KILYNLSFIEDPTRILRAVRFECRFQFK 627
Query: 265 LDEE---LKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQP 304
+DEE K A ++ +S+ R+ E+ M P
Sbjct: 628 MDEETFLFAKEAVNN------IPSLSKTRLSNELKKMFQEENP 664
>gi|198283568|ref|YP_002219889.1| poly(A) polymerase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|198248089|gb|ACH83682.1| poly(A) polymerase [Acidithiobacillus ferrooxidans ATCC 53993]
Length = 497
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 43/212 (20%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALD-------- 120
+++++D+ ++ LN L + L GG VRD LLG++ D D+A D
Sbjct: 47 RLQISDSALQV----LNGLHRAGFQAYL--VGGSVRDLLLGREPKDFDVATDAHPEQVRK 100
Query: 121 ------NMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFV 174
++G F ++ + E A + S+H ET + ++
Sbjct: 101 LFRRNARLIGRRFILVHVQFGNEIIEVATFRGSANGKEDESSEHSETGRILADNV----- 155
Query: 175 NLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKI 234
+G+ EEDA RRD T N+L+YNI S+ D + G+ DL+ G++
Sbjct: 156 -----------------YGSLEEDARRRDFTANALYYNIADRSILDFS-TGMEDLQAGRL 197
Query: 235 VTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
P+ + +DP+R+LRA+RF A+ F LD
Sbjct: 198 RVIGDPEQRYREDPVRMLRAVRFAAKLGFTLD 229
>gi|95928272|ref|ZP_01311020.1| poly(A) polymerase [Desulfuromonas acetoxidans DSM 684]
gi|95135543|gb|EAT17194.1| poly(A) polymerase [Desulfuromonas acetoxidans DSM 684]
Length = 419
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 88/187 (47%), Gaps = 34/187 (18%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGET---APSGFGVIPSNPD 154
+ GG VRD LLG+ D D+ D E K+ G A FG
Sbjct: 40 LVGGSVRDLLLGRKPKDFDVGTDAT--PEQVRKLFRNCRLIGRRFRLAHIMFG------- 90
Query: 155 QSKH--LETATMK-------LYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLT 205
+H +E AT + + D D N ++EN FGT EEDA+RRD T
Sbjct: 91 --RHCLIEVATFRRKPDPDEIPDAEEDGPN----HFAENV------FGTPEEDAFRRDFT 138
Query: 206 INSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFIL 265
IN+LFY+I S+ D G G+ DL G I P F +DP+R+LRA+ F AR DF L
Sbjct: 139 INALFYDIENYSIVDYVG-GLQDLHDGIIRVIGDPDERFHEDPVRMLRALEFSARLDFEL 197
Query: 266 DEELKKA 272
++ + A
Sbjct: 198 EQSIIPA 204
>gi|94676619|ref|YP_588681.1| poly(A) polymerase [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|94219769|gb|ABF13928.1| poly(A) polymerase [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 349
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
FG+ EEDA RRD ++N L+Y+I +V D TG G+ DL+ GKI P+ + +DP+R+
Sbjct: 64 FGSIEEDAQRRDFSVNCLYYSIEDFTVRDYTG-GLIDLRDGKIRMIGDPETRYREDPVRM 122
Query: 252 LRAIRFGARFDFILDEELKK 271
LRA+RF A+ + I+ EE K
Sbjct: 123 LRAVRFAAKLNMIISEETAK 142
>gi|218667450|ref|YP_002426193.1| polyA polymerase [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218519663|gb|ACK80249.1| polyA polymerase [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 477
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 43/212 (20%)
Query: 69 KIELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALD-------- 120
+++++D+ ++ LN L + L GG VRD LLG++ D D+A D
Sbjct: 27 RLQISDSALQV----LNGLHRAGFQAYL--VGGSVRDLLLGREPKDFDVATDAHPEQVRK 80
Query: 121 ------NMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFV 174
++G F ++ + E A + S+H ET + ++
Sbjct: 81 LFRRNARLIGRRFILVHVQFGNEIIEVATFRGSANGKEDESSEHSETGRILADNV----- 135
Query: 175 NLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKI 234
+G+ EEDA RRD T N+L+YNI S+ D + G+ DL+ G++
Sbjct: 136 -----------------YGSLEEDARRRDFTANALYYNIADRSILDFS-TGMEDLQAGRL 177
Query: 235 VTPLPPKATFLDDPLRVLRAIRFGARFDFILD 266
P+ + +DP+R+LRA+RF A+ F LD
Sbjct: 178 RVIGDPEQRYREDPVRMLRAVRFAAKLGFTLD 209
>gi|406968152|gb|EKD93069.1| hypothetical protein ACD_28C00254G0001 [uncultured bacterium]
Length = 448
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 99 AGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSG--FGVIPSNPDQS 156
AGG VRD+LL K+ D DI G + ++ + +T P G FGVI + +
Sbjct: 32 AGGCVRDRLLNKEPKDYDIV--TSAGPDDIERLLQ------KTIPIGKEFGVILA-IEGE 82
Query: 157 KHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTS 216
H E AT + YS+ R + F +AE+DA RRD TIN LFY+
Sbjct: 83 HHFEIATFR-----------SDAGYSDGRRPDAVTFTSAEDDAKRRDFTINGLFYDPLAD 131
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
+ D G G ADLK + P L+D LR+LRA+R F E +A
Sbjct: 132 EIYDYVG-GRADLKERMVRFIGDPHQRILEDHLRLLRAVRLKNTLQFQYHPETYRAVVQH 190
Query: 277 EVKAALAAKISRERVGTEIDLMVSGNQPVKA 307
A +++S ER+ E++ ++ + V+A
Sbjct: 191 H---ARVSRVSGERIRDELNKIMMSDHAVEA 218
>gi|365837109|ref|ZP_09378489.1| polynucleotide adenylyltransferase [Hafnia alvei ATCC 51873]
gi|364562687|gb|EHM40521.1| polynucleotide adenylyltransferase [Hafnia alvei ATCC 51873]
Length = 507
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 127/318 (39%), Gaps = 58/318 (18%)
Query: 27 TKTVSFRNIFTVNTTRNLGFLRCKATMSEQEPPRPVVVQVRDKIELTDTETKIFSCLLNT 86
KT+S IFT L +A ++ E R + V RD+ ++ +I L
Sbjct: 36 NKTLSRCTIFTRVANFCRKVLSREAESAQAEESRSMTVLPRDQHNIS--RQQISENALKV 93
Query: 87 LRHFN---LETVLRVAGGWVRDKLLGKDCYDIDIALD-------------NMMGSEF--- 127
L N E L GG VRD LLGK D DI ++G F
Sbjct: 94 LYRLNKSGYEAYL--VGGGVRDLLLGKQPKDFDITTSATPEQVRKLFRNCRLVGRRFRLA 151
Query: 128 ----ATKVAEYLSATGETAPSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSE 183
++ E + G +G G S Q+ L LR Y
Sbjct: 152 HVMFGPEIIEVATFRGHHEHAGDGKNISQQAQNGML----------------LRDNVY-- 193
Query: 184 NSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKAT 243
G EEDA RRD TINSL+Y+I+ +V D TG G+ DL+ G+I P+
Sbjct: 194 ---------GNIEEDAQRRDFTINSLYYSISDFTVRDYTG-GLRDLQEGRIRLIGDPETR 243
Query: 244 FLDDPLRVLRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQ 303
+ +DP+R+LRA+RF A+ D + + A AAL +I R+ E ++
Sbjct: 244 YREDPVRMLRAVRFAAKLDMTI---CPQTAEPIPRLAALLHEIPSARLFEESLKLLQSGY 300
Query: 304 PVKAMTHICGLTLFWIVF 321
+C LF +F
Sbjct: 301 GFATYKLLCEYQLFQPLF 318
>gi|294630321|ref|ZP_06708881.1| tRNA adenylyltransferase [Streptomyces sp. e14]
gi|292833654|gb|EFF92003.1| tRNA adenylyltransferase [Streptomyces sp. e14]
Length = 477
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 12/215 (5%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D E K+ + FG + + Q
Sbjct: 33 LALVGGSVRDALLGRLGNDLDFTTDAR--PEDVLKIVRPWADAVWDVGIAFGTVGA---Q 87
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ + + I+ R E Y SR P + +G + E+D RRD T+N++ +
Sbjct: 88 KQARVEGVERCFQ--IEVTTYRSEAYDRTSRKPEVSYGDSIEQDLVRRDFTVNAMAVALP 145
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G+ DL + TP P+ +F DDPLR++RA RF A+ DF + E+ A
Sbjct: 146 EKDFIDPHG-GLEDLAARVLRTPGTPEESFSDDPLRMMRAARFAAQLDFEVAPEVVTAMT 204
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMT 309
A +S ERV E++ ++ + P K +T
Sbjct: 205 E---MAERIEIVSAERVRDELNKLILSDHPRKGLT 236
>gi|312127262|ref|YP_003992136.1| polynucleotide adenylyltransferase region [Caldicellulosiruptor
hydrothermalis 108]
gi|311777281|gb|ADQ06767.1| Polynucleotide adenylyltransferase region [Caldicellulosiruptor
hydrothermalis 108]
Length = 394
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 96/199 (48%), Gaps = 25/199 (12%)
Query: 98 VAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQSK 157
+ GG VRD LLGK+ D DIA D K + + +T P+G K
Sbjct: 24 LVGGCVRDYLLGKEPQDFDIATD--------AKPEDVIHLFEKTIPTGI----------K 65
Query: 158 HLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRF-GTAEEDAYRRDLTINSLFYNINTS 216
H T T+ + + I+ R E +N R P + F + ED RRD TIN++ Y+ +
Sbjct: 66 H-GTVTVIINGVKIEVTTFRIEKEYKNHRWPKVEFINSLFEDLRRRDFTINAMAYHPDEG 124
Query: 217 SVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAASD 276
+ D G GI DLK+ + P F +D LR+LR IRF + F+++ E +A S
Sbjct: 125 LI-DYFG-GIEDLKNKIVRCVGNPHERFFEDALRILRCIRFVTQLSFVIENETFEALKS- 181
Query: 277 EVKAALAAKISRERVGTEI 295
L KIS+ER+ E+
Sbjct: 182 --LKDLLKKISKERINIEL 198
>gi|354614963|ref|ZP_09032783.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Saccharomonospora paurometabolica YIM 90007]
gi|353220689|gb|EHB85107.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Saccharomonospora paurometabolica YIM 90007]
Length = 495
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + VA + A +T FG + + +
Sbjct: 49 LYLVGGSVRDALLGRLSTDLDFTTD-ARPEQVQRLVAGWAEAVWDTGID-FGTVGAAKNG 106
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
+ ++ R + Y R P + FG T E D RRD T+N++ ++
Sbjct: 107 TT-------------LEITTFRADSYDRVGRNPEVAFGDTIEGDLVRRDFTVNAMAVEVS 153
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
T + D G G+ L + TP P+ +F DDPLR+LRA RF A+ F + A
Sbjct: 154 TKTFVDPYG-GLEALARRTLDTPATPEESFADDPLRMLRAARFVAQLGFTPAGRVVTAMT 212
Query: 275 --SDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
+DE+K +I+ ERV E+ M++G P + +
Sbjct: 213 DMADELK-----RITAERVQVELSKMLTGIAPRRGV 243
>gi|304414040|ref|ZP_07395408.1| poly(A) polymerase I [Candidatus Regiella insecticola LSR1]
gi|304283254|gb|EFL91650.1| poly(A) polymerase I [Candidatus Regiella insecticola LSR1]
Length = 471
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 192 FGTAEEDAYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRV 251
FG+ EEDA RRD TINSL+Y + + D G G+ DLK G I P+ + +DP+R+
Sbjct: 161 FGSIEEDAQRRDFTINSLYYGSSDFVLRDYCG-GLHDLKQGVIRLIGDPEVRYREDPVRM 219
Query: 252 LRAIRFGARFDFILDEELKKAAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHI 311
LRA+RF A+ D + E A + A+L + I R+ E ++ G K+ +
Sbjct: 220 LRAVRFAAKLDMTISPE---TAEPIKRMASLLSDIPPARLFEESLKLLQGGYGYKSYLKL 276
Query: 312 CGLTLFWIVFKL 323
C LF +F L
Sbjct: 277 CEYQLFQPLFPL 288
>gi|15843539|ref|NP_338576.1| poly(A) polymerase [Mycobacterium tuberculosis CDC1551]
gi|31795080|ref|NP_857573.1| poly(A) polymerase [Mycobacterium bovis AF2122/97]
gi|57117168|ref|YP_178026.1| Probable poly(A) polymerase PcnA (polynucleotide
adenylyltransferase) (NTP polymerase) (RNA adenylating
enzyme) (poly(A) polymerase) [Mycobacterium tuberculosis
H37Rv]
gi|121639818|ref|YP_980042.1| poly(A) polymerase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148663774|ref|YP_001285297.1| poly(A) polymerase [Mycobacterium tuberculosis H37Ra]
gi|148825115|ref|YP_001289869.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis F11]
gi|167969443|ref|ZP_02551720.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis H37Ra]
gi|224992313|ref|YP_002647003.1| poly(A) polymerase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800957|ref|YP_003033959.1| poly(A) polymerase [Mycobacterium tuberculosis KZN 1435]
gi|254366445|ref|ZP_04982489.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis str. Haarlem]
gi|254548911|ref|ZP_05139358.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289445508|ref|ZP_06435252.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis CPHL_A]
gi|289572559|ref|ZP_06452786.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis K85]
gi|289747751|ref|ZP_06507129.1| polyA polymerase [Mycobacterium tuberculosis 02_1987]
gi|289748445|ref|ZP_06507823.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis T92]
gi|289764098|ref|ZP_06523476.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis GM 1503]
gi|294995590|ref|ZP_06801281.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis 210]
gi|297636594|ref|ZP_06954374.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis KZN 4207]
gi|297733589|ref|ZP_06962707.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis KZN R506]
gi|298527379|ref|ZP_07014788.1| polyA polymerase [Mycobacterium tuberculosis 94_M4241A]
gi|306778272|ref|ZP_07416609.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu001]
gi|306778801|ref|ZP_07417138.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu002]
gi|306786828|ref|ZP_07425150.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu003]
gi|306786957|ref|ZP_07425279.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu004]
gi|306791512|ref|ZP_07429814.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu005]
gi|306795577|ref|ZP_07433879.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu006]
gi|306801552|ref|ZP_07438220.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu008]
gi|306805761|ref|ZP_07442429.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu007]
gi|306970159|ref|ZP_07482820.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu009]
gi|306974390|ref|ZP_07487051.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu010]
gi|307082099|ref|ZP_07491269.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu011]
gi|307086709|ref|ZP_07495822.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu012]
gi|313660920|ref|ZP_07817800.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis KZN V2475]
gi|339633897|ref|YP_004725539.1| polynucleotide adenylyltransferase [Mycobacterium africanum
GM041182]
gi|340628877|ref|YP_004747329.1| putative poly(A) polymerase PcnA [Mycobacterium canettii CIPT
140010059]
gi|375298179|ref|YP_005102447.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis KZN 4207]
gi|378773678|ref|YP_005173411.1| poly(A) polymerase [Mycobacterium bovis BCG str. Mexico]
gi|385993110|ref|YP_005911409.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis CCDC5180]
gi|385996757|ref|YP_005915056.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis CCDC5079]
gi|386000699|ref|YP_005918999.1| poly(A) polymerase [Mycobacterium tuberculosis CTRI-2]
gi|386006699|ref|YP_005924978.1| poly(A) polymerase PcnA [Mycobacterium tuberculosis RGTB423]
gi|392388500|ref|YP_005310129.1| pcnA [Mycobacterium tuberculosis UT205]
gi|392434393|ref|YP_006475438.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis KZN 605]
gi|397675872|ref|YP_006517408.1| tRNA adenylyltransferase [Mycobacterium tuberculosis H37Rv]
gi|422815163|ref|ZP_16863381.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis CDC1551A]
gi|424806464|ref|ZP_18231895.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis W-148]
gi|424945783|ref|ZP_18361479.1| poly(A) polymerase [Mycobacterium tuberculosis NCGM2209]
gi|433629052|ref|YP_007262681.1| Putative poly(A) polymerase PcnA (polynucleotide
adenylyltransferase) (NTP polymerase) (RNA adenylating
enzyme) (poly(A) polymerase) [Mycobacterium canettii
CIPT 140060008]
gi|449066029|ref|YP_007433112.1| poly(A) polymerase [Mycobacterium bovis BCG str. Korea 1168P]
gi|7478690|pir||D70600 probable polynucleotide polymerase - Mycobacterium tuberculosis
(strain H37RV)
gi|13883916|gb|AAK48390.1| polyA polymerase [Mycobacterium tuberculosis CDC1551]
gi|31620678|emb|CAD96123.1| POLY(A) POLYMERASE PCNA (POLYNUCLEOTIDE ADENYLYLTRANSFERASE) (NTP
POLYMERASE) (RNA ADENYLATING ENZYME) (POLY(A)
POLYMERASE) [Mycobacterium bovis AF2122/97]
gi|121495466|emb|CAL73954.1| Poly(A) polymerase pcnA [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|134151957|gb|EBA44002.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis str. Haarlem]
gi|148507926|gb|ABQ75735.1| polyA polymerase [Mycobacterium tuberculosis H37Ra]
gi|148723642|gb|ABR08267.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis F11]
gi|224775429|dbj|BAH28235.1| poly(A) polymerase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322461|gb|ACT27064.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis KZN 1435]
gi|289418466|gb|EFD15667.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis CPHL_A]
gi|289536990|gb|EFD41568.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis K85]
gi|289688279|gb|EFD55767.1| polyA polymerase [Mycobacterium tuberculosis 02_1987]
gi|289689032|gb|EFD56461.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis T92]
gi|289711604|gb|EFD75620.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis GM 1503]
gi|298497173|gb|EFI32467.1| polyA polymerase [Mycobacterium tuberculosis 94_M4241A]
gi|308213421|gb|EFO72820.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu001]
gi|308328138|gb|EFP16989.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu002]
gi|308328600|gb|EFP17451.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu003]
gi|308336255|gb|EFP25106.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu004]
gi|308339861|gb|EFP28712.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu005]
gi|308343873|gb|EFP32724.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu006]
gi|308347657|gb|EFP36508.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu007]
gi|308351575|gb|EFP40426.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu008]
gi|308352283|gb|EFP41134.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu009]
gi|308356285|gb|EFP45136.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu010]
gi|308360171|gb|EFP49022.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu011]
gi|308363862|gb|EFP52713.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis SUMu012]
gi|323717323|gb|EGB26528.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis CDC1551A]
gi|326905740|gb|EGE52673.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis W-148]
gi|328460685|gb|AEB06108.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis KZN 4207]
gi|339296712|gb|AEJ48823.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis CCDC5079]
gi|339300304|gb|AEJ52414.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis CCDC5180]
gi|339333253|emb|CCC28990.1| putative poly(A) polymerase PCNA (polynucleotide
adenylyltransferase) [Mycobacterium africanum GM041182]
gi|340007067|emb|CCC46258.1| putative poly(A) polymerase PCNA (polynucleotide
adenylyltransferase) (NTP polymerase) (RNA adenylating
enzyme) (poly(A) polymerase) [Mycobacterium canettii
CIPT 140010059]
gi|341603839|emb|CCC66521.1| Poly(A) polymerase pcnA [Mycobacterium bovis BCG str. Moreau RDJ]
gi|344221747|gb|AEN02378.1| poly(A) polymerase [Mycobacterium tuberculosis CTRI-2]
gi|356595999|gb|AET21228.1| Poly(A) polymerase [Mycobacterium bovis BCG str. Mexico]
gi|358230298|dbj|GAA43790.1| poly(A) polymerase [Mycobacterium tuberculosis NCGM2209]
gi|378547051|emb|CCE39330.1| pcnA [Mycobacterium tuberculosis UT205]
gi|379030317|dbj|BAL68050.1| poly(A) polymerase [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
gi|380727187|gb|AFE14982.1| putative poly(A) polymerase PcnA [Mycobacterium tuberculosis
RGTB423]
gi|392055803|gb|AFM51361.1| poly(A) polymerase pcnA [Mycobacterium tuberculosis KZN 605]
gi|395140778|gb|AFN51937.1| tRNA adenylyltransferase [Mycobacterium tuberculosis H37Rv]
gi|432156658|emb|CCK53924.1| Putative poly(A) polymerase PcnA (polynucleotide
adenylyltransferase) (NTP polymerase) (RNA adenylating
enzyme) (poly(A) polymerase) [Mycobacterium canettii
CIPT 140060008]
gi|440583423|emb|CCG13826.1| putative POLY(A) POLYMERASE PCNA (POLYNUCLEOTIDE
ADENYLYLTRANSFERASE) (NTP POLYMERASE) (RNA ADENYLATING
ENZYME) (POLY(A) POLYMERASE) [Mycobacterium tuberculosis
7199-99]
gi|444897470|emb|CCP46736.1| Probable poly(A) polymerase PcnA (polynucleotide
adenylyltransferase) (NTP polymerase) (RNA adenylating
enzyme) (poly(A) polymerase) [Mycobacterium tuberculosis
H37Rv]
gi|449034537|gb|AGE69964.1| poly(A) polymerase [Mycobacterium bovis BCG str. Korea 1168P]
Length = 480
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D V + A +T FG + +
Sbjct: 39 LYLVGGSVRDALLGRLSPDLDFTTDARP-ERVQEIVRPWADAVWDTGIE-FGTVGVG--K 94
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
S H ++ R + Y SR P +RFG E D RRD T N++ +
Sbjct: 95 SDHR-----------MEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVT 143
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + G+A L+ + TP P +F DDPLR+LRA RF ++ F + ++
Sbjct: 144 ATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVR-- 201
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
AA +E+ L A+IS ERV E+D ++ G P +
Sbjct: 202 AAIEEMAPQL-ARISAERVAAELDKLLVGEDPAAGI 236
>gi|311114001|ref|YP_003985222.1| RNA nucleotidyltransferase [Gardnerella vaginalis ATCC 14019]
gi|310945495|gb|ADP38199.1| RNA nucleotidyltransferase [Gardnerella vaginalis ATCC 14019]
Length = 495
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LL + +D+D + EF + + FG + + +
Sbjct: 46 LALVGGPVRDMLLHRTSHDLDFCT-SAKPEEFEHILRSWGHDGFWDMGRKFGTLGAVRRR 104
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
E ++ RC+DY +SR P +++G T E D RRD T+N++ +
Sbjct: 105 KDGTEVK--------VEITTYRCDDYEPDSRKPEVKYGDTLEGDLSRRDFTVNAMALRVP 156
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G DL G + TP+ P+ +F DDPLR++RA+RF A+ F + E A A
Sbjct: 157 DLEFVDPFG-GANDLAKGILRTPVDPRQSFDDDPLRMMRAVRFVAQLGFTI--EANTAEA 213
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
++ + L +S ERV EI M+ P
Sbjct: 214 ILDMVSRLDI-VSAERVRDEITKMLLSANP 242
>gi|415711207|ref|ZP_11464020.1| tRNA nucleotidyltransferase [Gardnerella vaginalis 55152]
gi|415713979|ref|ZP_11465359.1| tRNA nucleotidyltransferase [Gardnerella vaginalis 1400E]
gi|388058518|gb|EIK81308.1| tRNA nucleotidyltransferase [Gardnerella vaginalis 55152]
gi|388059337|gb|EIK82077.1| tRNA nucleotidyltransferase [Gardnerella vaginalis 1400E]
Length = 489
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LL + +D+D + EF + + FG + + +
Sbjct: 40 LALVGGPVRDMLLHRTSHDLDFCT-SAKPEEFEHILRSWGHDGFWDMGRKFGTLGAVRRR 98
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
E ++ RC+DY +SR P +++G T E D RRD T+N++ +
Sbjct: 99 KDGTEVK--------VEITTYRCDDYEPDSRKPEVKYGDTLEGDLSRRDFTVNAMALRVP 150
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G DL G + TP+ P+ +F DDPLR++RA+RF A+ F + E A A
Sbjct: 151 DLEFVDPFG-GANDLAKGILRTPVDPRQSFDDDPLRMMRAVRFVAQLGFTI--EANTAEA 207
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
++ + L +S ERV EI M+ P
Sbjct: 208 ILDMVSRLDI-VSAERVRDEITKMLLSANP 236
>gi|289756042|ref|ZP_06515420.1| polyA polymerase [Mycobacterium tuberculosis EAS054]
gi|289696629|gb|EFD64058.1| polyA polymerase [Mycobacterium tuberculosis EAS054]
Length = 480
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D V + A +T FG + +
Sbjct: 39 LYLVGGSVRDALLGRLSPDLDFTTDARP-ERVQEIVRPWADAVWDTGIE-FGTVGVG--K 94
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
S H ++ R + Y SR P +RFG E D RRD T N++ +
Sbjct: 95 SDHR-----------MEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVT 143
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + G+A L+ + TP P +F DDPLR+LRA RF ++ F + ++
Sbjct: 144 ATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVR-- 201
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
AA +E+ L A+IS ERV E+D ++ G P +
Sbjct: 202 AAIEEMAPQL-ARISAERVAAELDKLLVGEDPAAGI 236
>gi|433632994|ref|YP_007266622.1| Putative poly(A) polymerase PcnA (polynucleotide
adenylyltransferase) (NTP polymerase) (RNA adenylating
enzyme) (poly(A) polymerase) [Mycobacterium canettii
CIPT 140070010]
gi|432164587|emb|CCK62050.1| Putative poly(A) polymerase PcnA (polynucleotide
adenylyltransferase) (NTP polymerase) (RNA adenylating
enzyme) (poly(A) polymerase) [Mycobacterium canettii
CIPT 140070010]
Length = 480
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D V + A +T FG + +
Sbjct: 39 LYLVGGSVRDALLGRLSPDLDFTTDARP-ERVQEIVRPWADAVWDTGIE-FGTVGVG--K 94
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
S H ++ R + Y SR P +RFG E D RRD T N++ +
Sbjct: 95 SDHR-----------MEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVT 143
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + G+A L+ + TP P +F DDPLR+LRA RF ++ F + ++
Sbjct: 144 ATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVR-- 201
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
AA +E+ L A+IS ERV E+D ++ G P +
Sbjct: 202 AAIEEMAPQL-ARISAERVAAELDKLLVGEDPAAGI 236
>gi|433644097|ref|YP_007289856.1| Putative poly(A) polymerase PcnA (polynucleotide
adenylyltransferase) (NTP polymerase) (RNA adenylating
enzyme) (poly(A) polymerase) [Mycobacterium canettii
CIPT 140070008]
gi|432160645|emb|CCK57974.1| Putative poly(A) polymerase PcnA (polynucleotide
adenylyltransferase) (NTP polymerase) (RNA adenylating
enzyme) (poly(A) polymerase) [Mycobacterium canettii
CIPT 140070008]
Length = 480
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D V + A +T FG + +
Sbjct: 39 LYLVGGSVRDALLGRLSPDLDFTTDARP-ERVQEIVRPWADAVWDTGIE-FGTVGVG--K 94
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
S H ++ R + Y SR P +RFG E D RRD T N++ +
Sbjct: 95 SDHR-----------MEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVT 143
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + G+A L+ + TP P +F DDPLR+LRA RF ++ F + ++
Sbjct: 144 ATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVR-- 201
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
AA +E+ L A+IS ERV E+D ++ G P +
Sbjct: 202 AAIEEMAPQL-ARISAERVAAELDKLLVGEDPAAGI 236
>gi|404260664|ref|ZP_10963944.1| putative tRNA nucleotidyltransferase [Gordonia namibiensis NBRC
108229]
gi|403400851|dbj|GAC02354.1| putative tRNA nucleotidyltransferase [Gordonia namibiensis NBRC
108229]
Length = 480
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 21/216 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD +LG+ D+D D +V+ L G + D
Sbjct: 39 LYLVGGSVRDAVLGRLGNDLDFTTDAR-----PEEVSRLLK----------GWADAFWDV 83
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
T ++ I+ R + Y + SR P + FG T ++D RRD T+N++ I
Sbjct: 84 GIEFGTVGIRKGAHQIEITTFRADSYDQVSRNPEVTFGETLDDDLIRRDFTVNAMAVRIG 143
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
ED G++ L G I TP P+ +F DDPLR+LRA+RF ++ F L + A
Sbjct: 144 AKGAEDFCDPLDGMSALLAGVIDTPATPEQSFGDDPLRMLRAVRFISQLGFRLAPRVWHA 203
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
E+ + +I+ ERV E+D ++ G P+ A+
Sbjct: 204 IT--EMNGEI-DRITAERVRAELDKLICGEFPIDAI 236
>gi|336180328|ref|YP_004585703.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Frankia symbiont of Datisca glomerata]
gi|334861308|gb|AEH11782.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Frankia symbiont of Datisca glomerata]
Length = 539
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 106/234 (45%), Gaps = 24/234 (10%)
Query: 96 LRVAGGWVRDKLLGKDC---YDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSN 152
L + GG VRD LLG+ D+D A D E +A + A FG
Sbjct: 39 LYLVGGSVRDALLGRSGPSDADLDFATDAR--PEQILDIARAWADGVWEAGIAFG----- 91
Query: 153 PDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFY 211
T + + + R E Y SR PT+ +G T E D RRD T+N++
Sbjct: 92 --------TVGLVRSGVRFEVTTYRTEAYDRTSRNPTVAYGDTLEGDLVRRDFTVNAMAV 143
Query: 212 NINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKK 271
++ DL G G+ DL + TP P+A+F DDPLR+LRA RF A+ + EL
Sbjct: 144 SVPGHEFIDLFG-GLGDLARKVLRTPGSPEASFDDDPLRILRAARFEAQLGLVPVPELVA 202
Query: 272 AAASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAMTHICGLTLFWIVF-KLP 324
A S + + +S ER+ E+ ++ PV +T + + + IV +LP
Sbjct: 203 AMRSRTPRLKI---VSVERIRDELRKLMVAADPVAGLTRLVDVGVADIVLPELP 253
>gi|153003178|ref|YP_001377503.1| poly(A) polymerase [Anaeromyxobacter sp. Fw109-5]
gi|152026751|gb|ABS24519.1| poly(A) polymerase [Anaeromyxobacter sp. Fw109-5]
Length = 548
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 83 LLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFAT-KVAEYLSATGET 141
++ LRH GG VRD LLG D D+A D G A + +
Sbjct: 58 VIARLRHMRHRAYF--VGGCVRDLLLGAKPKDFDVATDAHPGEVRAIFRNCRLIGRRFRL 115
Query: 142 APSGFGVIPSNPDQSKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMR---FGTAEED 198
A F K +E AT + + + ED + + R FGTAEED
Sbjct: 116 AHVYF-------RGGKVIEVATFRKNPVDVG------EDVPDTDDLLITRDNVFGTAEED 162
Query: 199 AYRRDLTINSLFYNINTSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFG 258
A RRD T+N LFY++ T V D G G DL+ +I T P+ +DP+R+LRA+RF
Sbjct: 163 AVRRDFTVNGLFYDVATGEVIDYVG-GREDLEARRIATIGDPEIRMREDPVRLLRAVRFA 221
Query: 259 ARFDFIL 265
AR FI+
Sbjct: 222 ARLGFII 228
>gi|433637004|ref|YP_007270631.1| Putative poly(A) polymerase PcnA (polynucleotide
adenylyltransferase) (NTP polymerase) (RNA adenylating
enzyme) (poly(A) polymerase) [Mycobacterium canettii
CIPT 140070017]
gi|432168597|emb|CCK66141.1| Putative poly(A) polymerase PcnA (polynucleotide
adenylyltransferase) (NTP polymerase) (RNA adenylating
enzyme) (poly(A) polymerase) [Mycobacterium canettii
CIPT 140070017]
Length = 480
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 98/216 (45%), Gaps = 21/216 (9%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D V + A +T FG
Sbjct: 39 LYLVGGSVRDALLGRLSPDLDFTTDARP-ERVQEIVRPWADAVWDTGIE-FG-------- 88
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
T + D ++ R + Y SR P +RFG E D RRD T N++ +
Sbjct: 89 -----TVGVGKSDHSMEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVT 143
Query: 215 TSSVEDLTG--RGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKA 272
+ + G+A L+ + TP P +F DDPLR+LRA RF ++ F + ++
Sbjct: 144 ATGPGEFLDPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQLGFAVAPRVR-- 201
Query: 273 AASDEVKAALAAKISRERVGTEIDLMVSGNQPVKAM 308
AA +E+ L A+IS ERV E+D ++ G P +
Sbjct: 202 AAIEEMAPQL-ARISAERVAAELDKLLVGEDPAAGI 236
>gi|374988122|ref|YP_004963617.1| RNA nucleotidyltransferase [Streptomyces bingchenggensis BCW-1]
gi|297158774|gb|ADI08486.1| RNA nucleotidyltransferase [Streptomyces bingchenggensis BCW-1]
Length = 496
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LLG+ D+D D + V + A E + FG +
Sbjct: 49 LALVGGSVRDALLGRLGNDLDFTTD-ARPEDVLKIVRPWADAVWEVGIA-FGTVGCR--- 103
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
K I+ R E Y SR P + +G + +ED RRD T+N++ +
Sbjct: 104 -KEGGNGNGSSQSFQIEITTYRSEAYDRTSRKPEVSYGDSIDEDLVRRDFTVNAMAVALP 162
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G+ DL + TP P+ +F DDPLR++RA RF A+ DF + E+ A
Sbjct: 163 RKEFID-PHNGLEDLAAKVLRTPGTPEESFSDDPLRMMRAARFAAQLDFDVAPEVIAAM- 220
Query: 275 SDEVKAALAAKI---SRERVGTEIDLMVSGNQPVKAM 308
A+A +I S ERV E++ ++ +PVK +
Sbjct: 221 -----KAMAGRIEIVSAERVRDELNKLILAARPVKGL 252
>gi|373253360|ref|ZP_09541478.1| RNA nucleotidyltransferase [Nesterenkonia sp. F]
Length = 461
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 32/220 (14%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LG+ D+D D A A SGF ++ D
Sbjct: 19 LSLVGGPVRDLFLGRSSPDLDFTTDADPDQIIA-------------AVSGFA--DAHWDI 63
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFGTA-EEDAYRRDLTINSLFYNIN 214
+ T ++ D ++ R E Y SR P + FG+ E+D RRD T+N++ +
Sbjct: 64 GRDFGTIGIRKGDDILEVTTYRAEAYDPESRKPQVSFGSRLEDDLVRRDFTVNAMALRLP 123
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
+ ++ D G G+ DL + TP P+ +F DDPLR++RA RF A+ +
Sbjct: 124 SLTLVDPHG-GVKDLVAKHLRTPGAPEDSFSDDPLRMMRAARFAAQLGLDV--------- 173
Query: 275 SDEVKAALAAK------ISRERVGTEIDLMVSGNQPVKAM 308
+ EV+AA++A +S ERV E+ +++G P + +
Sbjct: 174 AVEVRAAMSAMADRLEIVSAERVREELVKLITGAHPRQGV 213
>gi|385802292|ref|YP_005838695.1| tRNA adenylyltransferase [Gardnerella vaginalis HMP9231]
gi|415703700|ref|ZP_11459451.1| tRNA nucleotidyltransferase [Gardnerella vaginalis 284V]
gi|415704643|ref|ZP_11459914.1| tRNA nucleotidyltransferase [Gardnerella vaginalis 75712]
gi|415706212|ref|ZP_11461286.1| tRNA nucleotidyltransferase [Gardnerella vaginalis 0288E]
gi|417555981|ref|ZP_12207043.1| tRNA adenylyltransferase [Gardnerella vaginalis 315-A]
gi|333393272|gb|AEF31190.1| tRNA adenylyltransferase [Gardnerella vaginalis HMP9231]
gi|333603304|gb|EGL14722.1| tRNA adenylyltransferase [Gardnerella vaginalis 315-A]
gi|388051006|gb|EIK74031.1| tRNA nucleotidyltransferase [Gardnerella vaginalis 284V]
gi|388051365|gb|EIK74389.1| tRNA nucleotidyltransferase [Gardnerella vaginalis 75712]
gi|388055104|gb|EIK78025.1| tRNA nucleotidyltransferase [Gardnerella vaginalis 0288E]
Length = 489
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 96 LRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGFGVIPSNPDQ 155
L + GG VRD LL + +D+D + EF + + FG + + +
Sbjct: 40 LALVGGPVRDMLLHRTSHDLDFCT-SAKPEEFEHILRSWGHDGFWDMGRKFGTLGAVRRR 98
Query: 156 SKHLETATMKLYDLWIDFVNLRCEDYSENSRIPTMRFG-TAEEDAYRRDLTINSLFYNIN 214
E ++ RC+DY +SR P +++G T E D RRD T+N++ +
Sbjct: 99 KDGTEVK--------VEITTYRCDDYEPDSRKPEVKYGDTLEGDLSRRDFTVNAMALRVP 150
Query: 215 TSSVEDLTGRGIADLKHGKIVTPLPPKATFLDDPLRVLRAIRFGARFDFILDEELKKAAA 274
D G G DL G + TP+ P+ +F DDPLR++RA+RF A+ F + E A A
Sbjct: 151 DLEFVDPFG-GANDLAKGILRTPVDPRQSFDDDPLRMMRAVRFVAQLGFTI--EANTAEA 207
Query: 275 SDEVKAALAAKISRERVGTEIDLMVSGNQP 304
++ + L +S ERV EI M+ P
Sbjct: 208 ILDMVSRLDI-VSAERVRDEITKMLLSANP 236
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,774,692,626
Number of Sequences: 23463169
Number of extensions: 314745811
Number of successful extensions: 732228
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1859
Number of HSP's successfully gapped in prelim test: 4251
Number of HSP's that attempted gapping in prelim test: 719171
Number of HSP's gapped (non-prelim): 8646
length of query: 523
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 376
effective length of database: 8,910,109,524
effective search space: 3350201181024
effective search space used: 3350201181024
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)