Query 009897
Match_columns 523
No_of_seqs 325 out of 3433
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 15:25:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009897.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009897hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xve_A Flavin-containing monoo 100.0 1.4E-49 4.6E-54 417.1 33.3 365 29-519 1-391 (464)
2 3gwf_A Cyclohexanone monooxyge 100.0 1.1E-47 3.8E-52 408.5 28.6 389 29-460 7-453 (540)
3 3uox_A Otemo; baeyer-villiger 100.0 3.4E-47 1.1E-51 405.2 25.2 391 28-460 7-462 (545)
4 4ap3_A Steroid monooxygenase; 100.0 8.9E-47 3E-51 402.3 27.6 389 29-460 20-467 (549)
5 2gv8_A Monooxygenase; FMO, FAD 100.0 7.9E-46 2.7E-50 387.5 30.2 356 29-515 5-410 (447)
6 1w4x_A Phenylacetone monooxyge 100.0 2.6E-45 8.8E-50 392.2 29.5 416 29-486 15-490 (542)
7 4a9w_A Monooxygenase; baeyer-v 100.0 2.1E-37 7.2E-42 313.2 24.3 344 30-464 3-352 (357)
8 3d1c_A Flavin-containing putat 100.0 7.7E-33 2.6E-37 281.6 26.0 322 30-473 4-348 (369)
9 4b63_A L-ornithine N5 monooxyg 100.0 6.7E-33 2.3E-37 292.9 20.4 329 31-400 40-412 (501)
10 3ab1_A Ferredoxin--NADP reduct 100.0 5.8E-32 2E-36 274.4 21.6 298 29-461 13-325 (360)
11 3lzw_A Ferredoxin--NADP reduct 100.0 9.3E-32 3.2E-36 269.2 21.8 290 30-459 7-310 (332)
12 2zbw_A Thioredoxin reductase; 100.0 6.9E-32 2.4E-36 270.9 19.9 295 30-460 5-313 (335)
13 3fbs_A Oxidoreductase; structu 100.0 2.9E-31 1E-35 261.3 21.3 282 29-460 1-288 (297)
14 3f8d_A Thioredoxin reductase ( 100.0 1.8E-30 6.3E-35 258.6 24.2 287 27-460 12-313 (323)
15 2q7v_A Thioredoxin reductase; 100.0 2E-29 6.8E-34 252.0 25.4 289 30-462 8-310 (325)
16 3itj_A Thioredoxin reductase 1 100.0 3.8E-30 1.3E-34 258.2 19.6 292 28-460 20-331 (338)
17 2q0l_A TRXR, thioredoxin reduc 100.0 2.4E-29 8.1E-34 249.7 21.7 284 31-460 2-305 (311)
18 2a87_A TRXR, TR, thioredoxin r 100.0 3E-29 1E-33 251.9 21.5 287 28-460 12-312 (335)
19 3r9u_A Thioredoxin reductase; 100.0 5.6E-29 1.9E-33 247.1 21.4 287 30-460 4-308 (315)
20 1trb_A Thioredoxin reductase; 100.0 3.5E-29 1.2E-33 249.5 19.3 293 28-459 3-309 (320)
21 1fl2_A Alkyl hydroperoxide red 100.0 9.1E-29 3.1E-33 245.4 22.2 285 31-460 2-301 (310)
22 3cty_A Thioredoxin reductase; 100.0 2.2E-28 7.4E-33 243.8 21.5 285 29-460 15-312 (319)
23 1vdc_A NTR, NADPH dependent th 100.0 4.1E-28 1.4E-32 243.2 21.0 294 30-466 8-329 (333)
24 3ef6_A Toluene 1,2-dioxygenase 100.0 1.8E-29 6E-34 260.6 9.3 289 29-463 1-310 (410)
25 3lxd_A FAD-dependent pyridine 100.0 1.2E-28 4.1E-33 254.9 15.1 291 28-463 7-322 (415)
26 4gcm_A TRXR, thioredoxin reduc 100.0 1.5E-27 5E-32 237.1 21.5 176 28-264 4-179 (312)
27 3s5w_A L-ornithine 5-monooxyge 100.0 6E-28 2E-32 253.3 18.4 203 31-269 31-267 (463)
28 1hyu_A AHPF, alkyl hydroperoxi 100.0 8.9E-27 3.1E-31 247.3 27.1 288 29-459 211-511 (521)
29 3klj_A NAD(FAD)-dependent dehy 100.0 2.8E-29 9.6E-34 256.3 6.8 277 30-463 9-295 (385)
30 3fg2_P Putative rubredoxin red 100.0 6.2E-29 2.1E-33 256.1 9.3 287 31-463 2-311 (404)
31 3iwa_A FAD-dependent pyridine 100.0 1.1E-27 3.7E-32 251.8 17.8 302 30-463 3-330 (472)
32 3ics_A Coenzyme A-disulfide re 100.0 7.4E-28 2.5E-32 260.0 16.8 297 27-461 33-352 (588)
33 4fk1_A Putative thioredoxin re 100.0 1.8E-27 6.3E-32 235.5 18.2 285 26-459 2-295 (304)
34 1xhc_A NADH oxidase /nitrite r 99.9 2.1E-28 7.1E-33 248.6 9.9 280 31-463 9-298 (367)
35 2bc0_A NADH oxidase; flavoprot 99.9 2.5E-27 8.5E-32 250.1 18.4 296 27-463 32-362 (490)
36 3urh_A Dihydrolipoyl dehydroge 99.9 8.4E-28 2.9E-32 253.9 14.1 312 26-463 21-364 (491)
37 3oc4_A Oxidoreductase, pyridin 99.9 3.6E-27 1.2E-31 246.5 18.6 292 29-463 1-315 (452)
38 2gqw_A Ferredoxin reductase; f 99.9 2.1E-27 7E-32 244.9 15.8 286 28-463 5-309 (408)
39 4a5l_A Thioredoxin reductase; 99.9 1.2E-26 4.1E-31 230.4 20.4 180 31-264 5-186 (314)
40 1mo9_A ORF3; nucleotide bindin 99.9 2.4E-27 8.3E-32 252.0 15.8 308 26-463 39-379 (523)
41 4eqs_A Coenzyme A disulfide re 99.9 5.5E-27 1.9E-31 243.6 17.9 296 32-464 2-313 (437)
42 3l8k_A Dihydrolipoyl dehydroge 99.9 3.8E-28 1.3E-32 254.8 7.6 295 30-462 4-333 (466)
43 3kd9_A Coenzyme A disulfide re 99.9 1.3E-26 4.3E-31 242.2 18.7 288 30-463 3-316 (449)
44 3ntd_A FAD-dependent pyridine 99.9 5.4E-27 1.8E-31 252.2 15.9 295 31-463 2-339 (565)
45 2wpf_A Trypanothione reductase 99.9 3.3E-27 1.1E-31 249.2 13.4 306 30-462 7-355 (495)
46 1zmd_A Dihydrolipoyl dehydroge 99.9 1.7E-27 5.9E-32 250.5 10.9 308 28-463 4-346 (474)
47 2qae_A Lipoamide, dihydrolipoy 99.9 1.4E-27 4.9E-32 250.6 10.1 307 29-462 1-340 (468)
48 1q1r_A Putidaredoxin reductase 99.9 2.6E-27 8.9E-32 245.8 11.7 291 29-463 3-320 (431)
49 1ojt_A Surface protein; redox- 99.9 2.4E-26 8.4E-31 242.1 17.4 307 30-463 6-350 (482)
50 2hqm_A GR, grase, glutathione 99.9 4.7E-27 1.6E-31 247.3 11.7 305 29-462 10-347 (479)
51 1xdi_A RV3303C-LPDA; reductase 99.9 1E-26 3.5E-31 246.0 14.1 313 29-462 1-342 (499)
52 1onf_A GR, grase, glutathione 99.9 1.2E-26 4E-31 245.5 13.9 305 29-462 1-371 (500)
53 1lvl_A Dihydrolipoamide dehydr 99.9 1.4E-26 4.7E-31 242.4 13.7 298 29-462 4-330 (458)
54 2a8x_A Dihydrolipoyl dehydroge 99.9 6.3E-27 2.1E-31 245.5 11.0 301 30-461 3-333 (464)
55 2v3a_A Rubredoxin reductase; a 99.9 2.2E-26 7.7E-31 235.4 14.8 287 30-463 4-307 (384)
56 2eq6_A Pyruvate dehydrogenase 99.9 1.3E-26 4.4E-31 242.9 12.3 298 30-463 6-335 (464)
57 2r9z_A Glutathione amide reduc 99.9 1.2E-26 4E-31 243.1 11.9 297 30-462 4-327 (463)
58 3dk9_A Grase, GR, glutathione 99.9 1.6E-26 5.6E-31 243.2 12.7 300 29-462 19-356 (478)
59 1ebd_A E3BD, dihydrolipoamide 99.9 3.1E-26 1.1E-30 239.6 14.6 302 30-462 3-333 (455)
60 3ic9_A Dihydrolipoamide dehydr 99.9 1.2E-27 4E-32 252.6 3.1 306 31-461 9-337 (492)
61 1dxl_A Dihydrolipoamide dehydr 99.9 4.3E-26 1.5E-30 239.6 14.9 307 30-462 6-342 (470)
62 1v59_A Dihydrolipoamide dehydr 99.9 2.1E-26 7.2E-31 242.4 11.3 305 30-462 5-350 (478)
63 1fec_A Trypanothione reductase 99.9 4.4E-26 1.5E-30 240.4 13.3 306 30-462 3-351 (490)
64 1ges_A Glutathione reductase; 99.9 8.4E-27 2.9E-31 243.4 7.6 297 30-462 4-328 (450)
65 2cdu_A NADPH oxidase; flavoenz 99.9 1.4E-25 4.8E-30 234.4 16.8 295 31-463 1-318 (452)
66 3qfa_A Thioredoxin reductase 1 99.9 6.5E-26 2.2E-30 240.7 13.6 305 30-462 32-380 (519)
67 2yqu_A 2-oxoglutarate dehydrog 99.9 1.8E-26 6E-31 241.5 9.1 302 31-462 2-327 (455)
68 3lad_A Dihydrolipoamide dehydr 99.9 5.8E-26 2E-30 239.0 12.9 307 29-463 2-344 (476)
69 3dgh_A TRXR-1, thioredoxin red 99.9 7.1E-26 2.4E-30 238.6 13.4 306 28-463 7-353 (483)
70 3o0h_A Glutathione reductase; 99.9 1.4E-25 4.6E-30 236.5 15.3 299 30-462 26-351 (484)
71 1zk7_A HGII, reductase, mercur 99.9 1.1E-25 3.7E-30 236.3 14.3 305 30-462 4-334 (467)
72 3dgz_A Thioredoxin reductase 2 99.9 5.1E-26 1.8E-30 240.0 11.8 307 29-463 5-353 (488)
73 3k30_A Histamine dehydrogenase 99.9 3.6E-26 1.2E-30 250.7 9.8 267 30-463 391-674 (690)
74 1nhp_A NADH peroxidase; oxidor 99.9 7.3E-25 2.5E-29 228.7 19.2 293 31-463 1-317 (447)
75 4dna_A Probable glutathione re 99.9 1.8E-25 6E-30 234.4 13.3 299 30-463 5-332 (463)
76 3h8l_A NADH oxidase; membrane 99.9 1.7E-25 5.8E-30 230.8 12.2 292 31-463 2-335 (409)
77 3cgb_A Pyridine nucleotide-dis 99.9 1.1E-24 3.8E-29 229.2 17.8 293 31-463 37-354 (480)
78 2vdc_G Glutamate synthase [NAD 99.9 5.8E-25 2E-29 228.9 11.5 164 29-265 121-300 (456)
79 2x8g_A Thioredoxin glutathione 99.9 1.1E-24 3.6E-29 235.7 11.9 309 29-462 106-459 (598)
80 1o94_A Tmadh, trimethylamine d 99.9 7.2E-25 2.5E-29 241.4 10.4 280 29-463 388-699 (729)
81 1ps9_A 2,4-dienoyl-COA reducta 99.9 1.6E-24 5.5E-29 237.0 12.3 316 3-459 337-671 (671)
82 4b1b_A TRXR, thioredoxin reduc 99.9 2E-24 6.9E-29 228.5 11.4 309 30-462 42-384 (542)
83 1m6i_A Programmed cell death p 99.9 1.4E-24 4.7E-29 229.1 8.2 309 28-463 9-353 (493)
84 3sx6_A Sulfide-quinone reducta 99.9 2.2E-24 7.5E-29 224.3 9.6 291 31-460 5-340 (437)
85 4g6h_A Rotenone-insensitive NA 99.9 7.5E-24 2.6E-28 223.3 11.9 301 30-466 42-403 (502)
86 1lqt_A FPRA; NADP+ derivative, 99.9 5E-24 1.7E-28 222.1 8.6 164 30-264 3-202 (456)
87 2gag_A Heterotetrameric sarcos 99.9 7.8E-23 2.7E-27 231.2 18.5 292 30-461 128-441 (965)
88 1cjc_A Protein (adrenodoxin re 99.9 7.1E-23 2.4E-27 213.6 10.2 164 29-264 5-200 (460)
89 3h28_A Sulfide-quinone reducta 99.9 3.4E-23 1.2E-27 215.0 5.5 288 29-459 1-328 (430)
90 1gte_A Dihydropyrimidine dehyd 99.8 2.6E-21 8.9E-26 220.2 12.6 165 30-264 187-367 (1025)
91 1y56_A Hypothetical protein PH 99.8 5.3E-20 1.8E-24 193.9 15.2 258 31-465 109-378 (493)
92 3hyw_A Sulfide-quinone reducta 99.8 1.4E-21 4.7E-26 202.7 2.0 101 353-460 208-329 (430)
93 3vrd_B FCCB subunit, flavocyto 99.8 6.5E-20 2.2E-24 188.4 9.8 293 31-466 3-330 (401)
94 2gqf_A Hypothetical protein HI 99.4 1.3E-13 4.4E-18 141.1 4.7 134 30-191 4-168 (401)
95 3v76_A Flavoprotein; structura 99.2 3.8E-11 1.3E-15 123.2 13.0 130 30-191 27-187 (417)
96 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 1.9E-11 6.5E-16 122.3 10.2 129 31-190 2-164 (342)
97 1yvv_A Amine oxidase, flavin-c 99.2 1.2E-10 4E-15 116.0 14.1 130 29-191 1-162 (336)
98 2ywl_A Thioredoxin reductase r 99.2 9.2E-11 3.1E-15 105.8 11.5 108 31-190 2-109 (180)
99 2cul_A Glucose-inhibited divis 99.2 7.3E-11 2.5E-15 111.3 10.8 123 28-191 1-125 (232)
100 3cgv_A Geranylgeranyl reductas 99.2 4.9E-11 1.7E-15 121.6 10.3 134 29-191 3-162 (397)
101 3fmw_A Oxygenase; mithramycin, 99.2 1.2E-10 4.2E-15 124.3 12.2 134 29-191 48-207 (570)
102 3nix_A Flavoprotein/dehydrogen 99.2 2E-10 6.9E-15 118.1 13.3 136 29-191 4-166 (421)
103 2xdo_A TETX2 protein; tetracyc 99.1 1.5E-10 5E-15 118.4 11.8 130 28-191 24-182 (398)
104 3rp8_A Flavoprotein monooxygen 99.1 4.5E-11 1.5E-15 122.6 7.9 130 29-191 22-181 (407)
105 3oz2_A Digeranylgeranylglycero 99.1 1.2E-10 4.3E-15 118.2 11.0 133 30-191 4-162 (397)
106 3nlc_A Uncharacterized protein 99.1 1.4E-10 4.6E-15 122.6 11.3 133 29-191 106-277 (549)
107 3fpz_A Thiazole biosynthetic e 99.1 1.2E-12 4.1E-17 130.2 -4.4 150 30-263 65-216 (326)
108 2i0z_A NAD(FAD)-utilizing dehy 99.1 6.8E-11 2.3E-15 122.8 8.1 134 27-191 23-191 (447)
109 3i3l_A Alkylhalidase CMLS; fla 99.1 2.5E-10 8.7E-15 122.1 12.6 138 27-191 20-188 (591)
110 3alj_A 2-methyl-3-hydroxypyrid 99.1 1.2E-10 4.2E-15 118.2 9.2 129 28-191 9-160 (379)
111 2vou_A 2,6-dihydroxypyridine h 99.1 4E-10 1.4E-14 115.1 13.0 131 28-191 3-153 (397)
112 2qa1_A PGAE, polyketide oxygen 99.1 3.8E-10 1.3E-14 118.7 13.1 139 25-191 6-165 (500)
113 2ywl_A Thioredoxin reductase r 99.1 1.3E-10 4.5E-15 104.8 7.5 160 229-461 3-168 (180)
114 2x3n_A Probable FAD-dependent 99.1 1.7E-10 5.7E-15 118.0 9.0 131 30-191 6-166 (399)
115 3ihg_A RDME; flavoenzyme, anth 99.1 3.5E-10 1.2E-14 120.2 11.8 139 29-191 4-183 (535)
116 1k0i_A P-hydroxybenzoate hydro 99.1 2.3E-10 7.8E-15 116.7 9.1 135 29-191 1-163 (394)
117 2qa2_A CABE, polyketide oxygen 99.1 8.5E-10 2.9E-14 116.0 13.7 138 26-191 8-166 (499)
118 3ces_A MNMG, tRNA uridine 5-ca 99.1 3E-10 1E-14 120.9 9.7 169 30-261 28-221 (651)
119 2gmh_A Electron transfer flavo 99.0 1.2E-09 4E-14 117.1 14.1 140 29-191 34-217 (584)
120 2bry_A NEDD9 interacting prote 99.0 3.3E-10 1.1E-14 119.1 9.1 138 28-191 90-230 (497)
121 2uzz_A N-methyl-L-tryptophan o 99.0 8.6E-10 2.9E-14 111.4 11.3 37 29-65 1-37 (372)
122 3c96_A Flavin-containing monoo 99.0 1.1E-09 3.7E-14 112.3 11.6 135 30-191 4-169 (410)
123 3e1t_A Halogenase; flavoprotei 99.0 1.8E-09 6E-14 114.1 13.4 136 29-191 6-172 (512)
124 3ps9_A TRNA 5-methylaminomethy 99.0 3.1E-09 1.1E-13 116.1 15.7 131 30-191 272-473 (676)
125 1y0p_A Fumarate reductase flav 99.0 2.7E-09 9.2E-14 114.2 14.7 137 29-191 125-317 (571)
126 2r0c_A REBC; flavin adenine di 99.0 2.5E-09 8.6E-14 113.9 14.3 132 30-191 26-196 (549)
127 1ryi_A Glycine oxidase; flavop 99.0 1.8E-09 6.3E-14 109.3 11.7 38 29-66 16-53 (382)
128 3dme_A Conserved exported prot 99.0 2.5E-09 8.6E-14 107.5 11.7 62 102-191 148-209 (369)
129 1rp0_A ARA6, thiazole biosynth 99.0 3.3E-09 1.1E-13 103.1 11.9 139 29-191 38-191 (284)
130 1qo8_A Flavocytochrome C3 fuma 99.0 3.8E-09 1.3E-13 112.9 13.3 138 28-191 119-312 (566)
131 3dje_A Fructosyl amine: oxygen 98.9 5.2E-09 1.8E-13 108.2 13.7 58 103-191 160-221 (438)
132 3atr_A Conserved archaeal prot 98.9 1.3E-09 4.4E-14 113.3 9.1 134 30-191 6-162 (453)
133 1y56_B Sarcosine oxidase; dehy 98.9 8.9E-09 3E-13 104.3 14.1 58 102-191 147-205 (382)
134 2gag_B Heterotetrameric sarcos 98.9 5.6E-09 1.9E-13 106.6 12.5 39 27-66 18-58 (405)
135 3nyc_A D-arginine dehydrogenas 98.9 2.2E-09 7.5E-14 108.6 9.3 58 102-191 152-209 (381)
136 2zxi_A TRNA uridine 5-carboxym 98.9 6.1E-10 2.1E-14 118.2 5.0 169 30-261 27-220 (637)
137 2gf3_A MSOX, monomeric sarcosi 98.9 6.6E-09 2.3E-13 105.4 12.3 38 29-66 2-39 (389)
138 4hb9_A Similarities with proba 98.9 1E-08 3.5E-13 104.7 12.1 35 31-65 2-36 (412)
139 3pvc_A TRNA 5-methylaminomethy 98.9 2E-08 6.9E-13 109.9 14.8 132 30-191 264-469 (689)
140 3k7m_X 6-hydroxy-L-nicotine ox 98.8 1.8E-08 6.1E-13 103.8 12.6 40 31-70 2-41 (431)
141 3kkj_A Amine oxidase, flavin-c 98.8 2.8E-09 9.4E-14 101.8 5.9 43 29-71 1-43 (336)
142 1d4d_A Flavocytochrome C fumar 98.8 4.5E-08 1.5E-12 104.6 14.7 137 30-191 126-317 (572)
143 3cp8_A TRNA uridine 5-carboxym 98.8 5.9E-09 2E-13 111.0 7.6 172 29-261 20-215 (641)
144 3da1_A Glycerol-3-phosphate de 98.8 2.6E-08 8.7E-13 106.2 11.8 40 29-68 17-56 (561)
145 2oln_A NIKD protein; flavoprot 98.8 2.7E-08 9.2E-13 101.3 11.5 36 30-65 4-39 (397)
146 2qcu_A Aerobic glycerol-3-phos 98.8 4.5E-08 1.6E-12 103.0 13.0 63 103-191 148-210 (501)
147 2dkh_A 3-hydroxybenzoate hydro 98.8 4.4E-08 1.5E-12 106.1 13.2 144 30-191 32-211 (639)
148 4at0_A 3-ketosteroid-delta4-5a 98.7 9.3E-08 3.2E-12 100.8 15.0 40 29-68 40-79 (510)
149 3nrn_A Uncharacterized protein 98.7 2.2E-08 7.5E-13 102.9 9.1 41 31-71 1-41 (421)
150 3i6d_A Protoporphyrinogen oxid 98.7 1.1E-08 3.9E-13 106.4 7.0 41 29-69 4-50 (470)
151 3ka7_A Oxidoreductase; structu 98.7 3.9E-08 1.3E-12 101.0 9.3 40 31-70 1-40 (425)
152 3jsk_A Cypbp37 protein; octame 98.7 4E-08 1.4E-12 96.9 8.7 105 29-135 78-190 (344)
153 2cul_A Glucose-inhibited divis 98.7 3.6E-08 1.2E-12 92.7 8.0 112 350-462 73-230 (232)
154 1pj5_A N,N-dimethylglycine oxi 98.6 1.1E-07 3.8E-12 106.2 12.8 35 30-64 4-39 (830)
155 2e5v_A L-aspartate oxidase; ar 98.6 8.4E-08 2.9E-12 100.0 11.0 36 32-68 1-36 (472)
156 1pn0_A Phenol 2-monooxygenase; 98.6 1E-07 3.5E-12 103.5 11.7 105 30-136 8-152 (665)
157 2aqj_A Tryptophan halogenase, 98.6 5.6E-08 1.9E-12 103.2 9.2 59 102-191 163-222 (538)
158 3c4a_A Probable tryptophan hyd 98.6 9.2E-09 3.2E-13 104.3 3.0 101 31-133 1-125 (381)
159 2gjc_A Thiazole biosynthetic e 98.6 7.3E-08 2.5E-12 94.5 9.1 103 31-135 66-176 (326)
160 2wdq_A Succinate dehydrogenase 98.6 2.6E-07 8.8E-12 98.9 13.4 38 29-66 6-43 (588)
161 3c4n_A Uncharacterized protein 98.6 4.3E-08 1.5E-12 100.3 7.0 35 30-64 36-72 (405)
162 2pyx_A Tryptophan halogenase; 98.6 1.7E-07 5.8E-12 99.2 11.6 60 101-191 172-233 (526)
163 2weu_A Tryptophan 5-halogenase 98.6 6.9E-08 2.4E-12 101.8 8.5 60 101-191 170-230 (511)
164 2yqu_A 2-oxoglutarate dehydrog 98.6 2.4E-07 8.3E-12 96.2 12.5 97 30-190 167-263 (455)
165 3axb_A Putative oxidoreductase 98.6 1.4E-07 4.8E-12 97.7 10.4 47 19-65 12-59 (448)
166 2e4g_A Tryptophan halogenase; 98.6 2.8E-07 9.6E-12 98.1 12.9 60 101-191 191-252 (550)
167 2v3a_A Rubredoxin reductase; a 98.6 3.3E-07 1.1E-11 92.9 12.1 98 30-190 145-242 (384)
168 1kf6_A Fumarate reductase flav 98.6 2.9E-07 9.9E-12 98.8 12.1 37 30-66 5-43 (602)
169 2h88_A Succinate dehydrogenase 98.5 3E-07 1E-11 98.6 11.9 37 30-66 18-54 (621)
170 1ges_A Glutathione reductase; 98.5 3.7E-07 1.3E-11 94.6 12.3 102 30-197 167-268 (450)
171 2e1m_A L-glutamate oxidase; L- 98.5 1.2E-07 4.2E-12 95.2 8.0 93 29-128 43-136 (376)
172 1onf_A GR, grase, glutathione 98.5 1.4E-06 4.7E-11 91.6 16.4 102 30-197 176-278 (500)
173 2ivd_A PPO, PPOX, protoporphyr 98.5 2.1E-07 7.2E-12 97.2 9.9 42 29-70 15-56 (478)
174 1v59_A Dihydrolipoamide dehydr 98.5 4.9E-07 1.7E-11 94.4 12.5 108 30-197 183-290 (478)
175 1ebd_A E3BD, dihydrolipoamide 98.5 5.7E-07 1.9E-11 93.4 12.4 104 30-197 170-273 (455)
176 1chu_A Protein (L-aspartate ox 98.5 2E-07 6.7E-12 98.8 8.9 38 29-67 7-44 (540)
177 2eq6_A Pyruvate dehydrogenase 98.5 6.1E-07 2.1E-11 93.3 12.4 106 30-197 169-274 (464)
178 2bs2_A Quinol-fumarate reducta 98.5 8.5E-07 2.9E-11 95.9 13.3 36 30-65 5-40 (660)
179 2rgh_A Alpha-glycerophosphate 98.5 1E-06 3.6E-11 93.9 13.8 38 30-67 32-69 (571)
180 3s5w_A L-ornithine 5-monooxyge 98.5 3.9E-07 1.3E-11 94.7 10.2 175 30-235 227-417 (463)
181 4gde_A UDP-galactopyranose mut 98.5 7.5E-08 2.6E-12 101.4 4.5 46 25-70 5-51 (513)
182 1nhp_A NADH peroxidase; oxidor 98.5 4.6E-07 1.6E-11 93.8 10.3 103 30-199 149-251 (447)
183 3lxd_A FAD-dependent pyridine 98.4 9.5E-07 3.2E-11 90.5 12.3 102 30-196 152-253 (415)
184 4gut_A Lysine-specific histone 98.4 9.1E-07 3.1E-11 97.2 12.2 39 29-67 335-373 (776)
185 3ef6_A Toluene 1,2-dioxygenase 98.4 8.8E-07 3E-11 90.6 11.2 98 30-190 143-240 (410)
186 3fg2_P Putative rubredoxin red 98.4 1.4E-06 4.7E-11 89.0 12.0 99 30-190 142-240 (404)
187 1fec_A Trypanothione reductase 98.4 1.2E-06 3.9E-11 91.9 11.5 102 30-197 187-291 (490)
188 2a8x_A Dihydrolipoyl dehydroge 98.4 1.7E-06 5.9E-11 89.9 12.6 103 30-197 171-274 (464)
189 2qae_A Lipoamide, dihydrolipoy 98.4 1.8E-06 6.1E-11 89.9 12.7 99 30-190 174-275 (468)
190 2gqw_A Ferredoxin reductase; f 98.4 1.3E-06 4.6E-11 89.2 11.4 94 30-190 145-238 (408)
191 2wpf_A Trypanothione reductase 98.4 1.4E-06 4.7E-11 91.4 11.7 102 30-197 191-295 (495)
192 1q1r_A Putidaredoxin reductase 98.4 2E-06 6.7E-11 88.6 12.6 99 30-190 149-249 (431)
193 2hqm_A GR, grase, glutathione 98.4 1.4E-06 4.9E-11 90.9 11.6 102 30-196 185-287 (479)
194 3urh_A Dihydrolipoyl dehydroge 98.4 2.3E-06 8E-11 89.6 13.3 106 30-197 198-303 (491)
195 1lvl_A Dihydrolipoamide dehydr 98.4 6.4E-07 2.2E-11 93.0 8.8 101 30-197 171-271 (458)
196 1zmd_A Dihydrolipoyl dehydroge 98.4 1.6E-06 5.4E-11 90.4 11.8 104 30-190 178-281 (474)
197 3oc4_A Oxidoreductase, pyridin 98.4 2.3E-06 7.7E-11 88.7 12.8 101 30-197 147-247 (452)
198 1xdi_A RV3303C-LPDA; reductase 98.4 1.9E-06 6.5E-11 90.5 12.3 97 30-190 182-278 (499)
199 2r9z_A Glutathione amide reduc 98.4 1.5E-06 5.1E-11 90.3 11.1 102 30-197 166-267 (463)
200 1ojt_A Surface protein; redox- 98.3 8.8E-07 3E-11 92.6 9.2 104 30-196 185-288 (482)
201 1dxl_A Dihydrolipoamide dehydr 98.3 1.5E-06 5E-11 90.6 10.7 102 30-190 177-278 (470)
202 1zk7_A HGII, reductase, mercur 98.3 2.1E-06 7.1E-11 89.4 11.7 95 30-190 176-270 (467)
203 4b1b_A TRXR, thioredoxin reduc 98.3 2.2E-06 7.5E-11 90.4 11.9 102 29-198 222-323 (542)
204 3iwa_A FAD-dependent pyridine 98.3 2.8E-06 9.7E-11 88.5 12.6 98 30-190 159-257 (472)
205 3ic9_A Dihydrolipoamide dehydr 98.3 3E-06 1E-10 88.8 12.5 105 29-197 173-277 (492)
206 2bc0_A NADH oxidase; flavoprot 98.3 2.4E-06 8.1E-11 89.5 11.4 101 30-197 194-294 (490)
207 3o0h_A Glutathione reductase; 98.3 2.9E-06 9.8E-11 88.7 12.0 97 30-190 191-287 (484)
208 3cgb_A Pyridine nucleotide-dis 98.3 1.3E-06 4.3E-11 91.4 9.2 96 30-190 186-281 (480)
209 3lad_A Dihydrolipoamide dehydr 98.3 3.7E-06 1.3E-10 87.7 12.7 104 30-197 180-283 (476)
210 2cdu_A NADPH oxidase; flavoenz 98.3 2.9E-06 1E-10 87.9 11.4 101 30-197 149-250 (452)
211 3ntd_A FAD-dependent pyridine 98.3 4E-06 1.4E-10 89.5 12.7 114 31-190 152-266 (565)
212 3dgh_A TRXR-1, thioredoxin red 98.3 7.3E-06 2.5E-10 85.6 13.8 106 30-197 187-292 (483)
213 4dgk_A Phytoene dehydrogenase; 98.3 4.5E-07 1.5E-11 95.2 4.6 41 31-71 2-42 (501)
214 1xhc_A NADH oxidase /nitrite r 98.3 1.7E-06 5.9E-11 87.0 8.5 90 31-190 144-233 (367)
215 3hyw_A Sulfide-quinone reducta 98.2 2.2E-06 7.4E-11 88.2 9.3 107 227-398 2-110 (430)
216 1mo9_A ORF3; nucleotide bindin 98.2 4.9E-06 1.7E-10 87.8 12.0 101 31-196 215-318 (523)
217 3dgz_A Thioredoxin reductase 2 98.2 9.2E-06 3.2E-10 85.0 13.8 106 30-197 185-290 (488)
218 3dk9_A Grase, GR, glutathione 98.2 7.3E-06 2.5E-10 85.5 13.0 108 29-197 186-296 (478)
219 4eqs_A Coenzyme A disulfide re 98.2 2.4E-06 8.3E-11 88.1 9.0 96 31-197 148-243 (437)
220 1trb_A Thioredoxin reductase; 98.2 7.4E-06 2.5E-10 80.3 12.0 102 30-190 145-246 (320)
221 1rsg_A FMS1 protein; FAD bindi 98.2 6.8E-07 2.3E-11 94.3 4.6 43 29-71 7-50 (516)
222 1m6i_A Programmed cell death p 98.2 5.7E-06 2E-10 86.6 11.6 98 30-190 180-281 (493)
223 1v0j_A UDP-galactopyranose mut 98.2 1.2E-06 4E-11 89.3 5.7 42 30-71 7-49 (399)
224 2b9w_A Putative aminooxidase; 98.2 1.5E-06 5.1E-11 89.1 6.6 43 29-71 5-48 (424)
225 1jnr_A Adenylylsulfate reducta 98.2 1.7E-05 5.7E-10 85.8 14.7 36 29-64 21-60 (643)
226 4dna_A Probable glutathione re 98.2 7.6E-06 2.6E-10 85.0 11.5 97 30-190 170-267 (463)
227 3gyx_A Adenylylsulfate reducta 98.2 3.6E-06 1.2E-10 90.9 9.2 35 30-64 22-62 (662)
228 3nks_A Protoporphyrinogen oxid 98.2 1.2E-06 4.2E-11 91.3 5.0 43 29-71 1-45 (477)
229 2bcg_G Secretory pathway GDP d 98.1 2E-06 6.7E-11 89.2 6.5 43 29-71 10-52 (453)
230 3hdq_A UDP-galactopyranose mut 98.1 1.9E-06 6.5E-11 87.2 6.1 43 29-71 28-70 (397)
231 3ics_A Coenzyme A-disulfide re 98.1 6.9E-06 2.4E-10 88.0 10.2 95 30-190 187-281 (588)
232 2zbw_A Thioredoxin reductase; 98.1 1.1E-05 3.9E-10 79.5 11.0 100 30-190 152-251 (335)
233 4dsg_A UDP-galactopyranose mut 98.1 3.3E-06 1.1E-10 88.3 7.2 49 29-77 8-59 (484)
234 2bi7_A UDP-galactopyranose mut 98.1 2.4E-06 8.2E-11 86.5 5.6 42 30-71 3-44 (384)
235 3vrd_B FCCB subunit, flavocyto 98.1 5.9E-06 2E-10 84.1 8.3 109 226-400 1-111 (401)
236 3d1c_A Flavin-containing putat 98.1 9.1E-06 3.1E-10 81.4 9.5 103 31-190 167-271 (369)
237 2yg5_A Putrescine oxidase; oxi 98.1 1.9E-06 6.5E-11 89.2 4.5 42 30-71 5-46 (453)
238 3qfa_A Thioredoxin reductase 1 98.1 2.8E-05 9.7E-10 81.9 13.4 109 30-197 210-318 (519)
239 2jae_A L-amino acid oxidase; o 98.1 3.3E-06 1.1E-10 88.3 6.1 43 29-71 10-52 (489)
240 1s3e_A Amine oxidase [flavin-c 98.0 3.1E-06 1.1E-10 89.3 5.7 42 30-71 4-45 (520)
241 3kd9_A Coenzyme A disulfide re 98.0 1.3E-05 4.5E-10 82.8 10.0 95 31-190 149-243 (449)
242 3lov_A Protoporphyrinogen oxid 98.0 4.2E-06 1.4E-10 87.1 6.1 44 28-71 2-47 (475)
243 3itj_A Thioredoxin reductase 1 98.0 2.5E-05 8.5E-10 77.0 10.2 98 30-190 173-270 (338)
244 3ab1_A Ferredoxin--NADP reduct 98.0 1.7E-05 5.9E-10 79.2 9.1 100 30-190 163-262 (360)
245 1fl2_A Alkyl hydroperoxide red 98.0 4.9E-05 1.7E-09 74.0 12.0 95 31-190 145-241 (310)
246 4g6h_A Rotenone-insensitive NA 98.0 3.1E-05 1E-09 81.2 11.1 100 31-190 218-331 (502)
247 1sez_A Protoporphyrinogen oxid 97.9 5.9E-06 2E-10 86.8 5.3 42 30-71 13-54 (504)
248 1i8t_A UDP-galactopyranose mut 97.9 6.1E-06 2.1E-10 83.0 5.1 41 31-71 2-42 (367)
249 2q7v_A Thioredoxin reductase; 97.9 1.9E-05 6.6E-10 77.6 8.6 97 30-190 152-248 (325)
250 3sx6_A Sulfide-quinone reducta 97.9 3.7E-05 1.3E-09 79.1 10.9 109 228-400 5-115 (437)
251 3ihm_A Styrene monooxygenase A 97.9 5.5E-06 1.9E-10 85.2 4.3 36 28-63 20-55 (430)
252 3l8k_A Dihydrolipoyl dehydroge 97.9 3.4E-05 1.1E-09 80.2 10.1 105 29-197 171-275 (466)
253 3cty_A Thioredoxin reductase; 97.9 6.4E-05 2.2E-09 73.6 11.7 97 30-190 155-251 (319)
254 2q0l_A TRXR, thioredoxin reduc 97.9 2.2E-05 7.6E-10 76.6 8.1 98 30-190 143-240 (311)
255 2iid_A L-amino-acid oxidase; f 97.9 6.5E-06 2.2E-10 86.3 4.4 42 30-71 33-74 (498)
256 1vdc_A NTR, NADPH dependent th 97.9 2.7E-05 9.3E-10 76.7 8.7 100 30-190 159-258 (333)
257 3f8d_A Thioredoxin reductase ( 97.9 3.9E-05 1.3E-09 74.9 9.2 97 30-190 154-250 (323)
258 2vvm_A Monoamine oxidase N; FA 97.8 1.8E-05 6.2E-10 82.8 7.0 41 31-71 40-80 (495)
259 2x8g_A Thioredoxin glutathione 97.8 0.00015 5.2E-09 77.7 14.2 104 30-190 286-394 (598)
260 2a87_A TRXR, TR, thioredoxin r 97.8 2.2E-05 7.4E-10 77.7 6.9 97 30-190 155-251 (335)
261 1d5t_A Guanine nucleotide diss 97.8 1.6E-05 5.6E-10 81.7 6.1 42 30-71 6-47 (433)
262 3klj_A NAD(FAD)-dependent dehy 97.8 1.1E-05 3.7E-10 81.7 4.5 66 30-129 146-211 (385)
263 3lzw_A Ferredoxin--NADP reduct 97.8 9.6E-05 3.3E-09 72.5 11.1 96 30-190 154-249 (332)
264 3h28_A Sulfide-quinone reducta 97.8 3.9E-05 1.3E-09 78.8 7.9 108 228-400 3-112 (430)
265 1b37_A Protein (polyamine oxid 97.7 2.6E-05 8.8E-10 81.2 6.2 50 30-79 4-55 (472)
266 3h8l_A NADH oxidase; membrane 97.7 8.3E-05 2.8E-09 75.7 9.7 107 228-400 2-116 (409)
267 3p1w_A Rabgdi protein; GDI RAB 97.7 2.3E-05 7.8E-10 81.0 5.4 42 30-71 20-61 (475)
268 3fbs_A Oxidoreductase; structu 97.7 5E-05 1.7E-09 73.3 7.4 33 228-263 3-35 (297)
269 3r9u_A Thioredoxin reductase; 97.7 6.5E-05 2.2E-09 73.1 8.1 97 30-190 147-243 (315)
270 1c0p_A D-amino acid oxidase; a 97.7 3.3E-05 1.1E-09 77.3 5.7 34 30-63 6-39 (363)
271 1hyu_A AHPF, alkyl hydroperoxi 97.7 0.00013 4.3E-09 76.9 10.3 96 30-190 355-452 (521)
272 4a5l_A Thioredoxin reductase; 97.7 0.00011 3.6E-09 71.7 8.9 33 31-63 153-185 (314)
273 2z3y_A Lysine-specific histone 97.7 3.6E-05 1.2E-09 83.6 5.9 43 29-71 106-148 (662)
274 2xag_A Lysine-specific histone 97.6 4.4E-05 1.5E-09 84.6 6.2 43 29-71 277-319 (852)
275 3k30_A Histamine dehydrogenase 97.6 0.00015 5.3E-09 79.0 10.3 99 30-190 523-623 (690)
276 2xve_A Flavin-containing monoo 97.6 0.00017 5.7E-09 74.8 9.8 36 30-65 197-232 (464)
277 3pl8_A Pyranose 2-oxidase; sub 97.5 6.7E-05 2.3E-09 80.7 5.2 40 30-69 46-85 (623)
278 3ayj_A Pro-enzyme of L-phenyla 97.5 2.4E-05 8.4E-10 84.4 1.8 36 30-65 56-100 (721)
279 3g3e_A D-amino-acid oxidase; F 97.5 4.4E-05 1.5E-09 75.9 3.6 34 31-64 1-40 (351)
280 2gv8_A Monooxygenase; FMO, FAD 97.4 0.00023 7.9E-09 73.3 8.3 34 30-63 212-246 (447)
281 4a9w_A Monooxygenase; baeyer-v 97.4 0.00016 5.4E-09 71.6 6.4 33 30-63 163-195 (357)
282 3g5s_A Methylenetetrahydrofola 97.4 0.00018 6E-09 71.6 5.7 36 31-66 2-37 (443)
283 2gag_A Heterotetrameric sarcos 97.3 0.00047 1.6E-08 78.0 9.2 98 31-196 285-385 (965)
284 3gwf_A Cyclohexanone monooxyge 97.3 0.00071 2.4E-08 71.4 10.1 35 30-64 178-212 (540)
285 1lqt_A FPRA; NADP+ derivative, 97.2 0.0015 5.2E-08 67.4 11.3 36 30-65 147-203 (456)
286 4fk1_A Putative thioredoxin re 97.2 0.0006 2E-08 66.2 7.6 31 229-262 8-38 (304)
287 4gcm_A TRXR, thioredoxin reduc 97.2 0.0011 3.9E-08 64.4 9.6 36 30-65 145-180 (312)
288 1ps9_A 2,4-dienoyl-COA reducta 97.2 0.00067 2.3E-08 73.7 8.2 29 30-58 494-522 (671)
289 1cjc_A Protein (adrenodoxin re 97.1 0.0032 1.1E-07 65.0 12.7 35 30-64 145-200 (460)
290 1o94_A Tmadh, trimethylamine d 97.1 0.00061 2.1E-08 74.7 6.9 70 30-134 528-599 (729)
291 2vdc_G Glutamate synthase [NAD 97.1 0.00082 2.8E-08 69.4 7.3 35 29-63 263-298 (456)
292 3alj_A 2-methyl-3-hydroxypyrid 97.0 0.00081 2.8E-08 67.5 6.6 50 348-398 110-161 (379)
293 2bry_A NEDD9 interacting prote 97.0 0.0012 4.3E-08 68.8 8.1 36 226-264 91-126 (497)
294 1vg0_A RAB proteins geranylger 96.9 0.00089 3E-08 71.4 6.1 43 29-71 7-49 (650)
295 3uox_A Otemo; baeyer-villiger 96.9 0.0016 5.5E-08 68.7 7.8 35 30-64 185-219 (545)
296 1kdg_A CDH, cellobiose dehydro 96.8 0.00085 2.9E-08 71.0 5.0 36 29-64 6-41 (546)
297 1gte_A Dihydropyrimidine dehyd 96.8 0.0065 2.2E-07 69.1 12.0 35 29-63 331-366 (1025)
298 3t37_A Probable dehydrogenase; 96.7 0.00096 3.3E-08 70.2 4.6 35 30-64 17-52 (526)
299 4ap3_A Steroid monooxygenase; 96.7 0.005 1.7E-07 65.0 9.8 35 30-64 191-225 (549)
300 2x3n_A Probable FAD-dependent 96.6 0.0029 9.8E-08 63.9 7.4 51 347-398 109-167 (399)
301 1ju2_A HydroxynitrIle lyase; f 96.6 0.00099 3.4E-08 70.3 3.5 35 30-65 26-60 (536)
302 3nlc_A Uncharacterized protein 96.6 0.0055 1.9E-07 64.4 9.2 49 349-398 224-278 (549)
303 1rp0_A ARA6, thiazole biosynth 96.5 0.003 1E-07 60.7 6.3 34 228-264 40-74 (284)
304 1n4w_A CHOD, cholesterol oxida 96.5 0.0019 6.5E-08 67.6 5.0 38 29-66 4-41 (504)
305 3ces_A MNMG, tRNA uridine 5-ca 96.5 0.0033 1.1E-07 67.0 6.8 48 349-397 128-181 (651)
306 3v76_A Flavoprotein; structura 96.5 0.00068 2.3E-08 69.1 1.4 35 227-264 27-61 (417)
307 3q9t_A Choline dehydrogenase a 96.4 0.002 6.9E-08 68.3 4.3 36 29-64 5-41 (577)
308 3fwz_A Inner membrane protein 96.3 0.0059 2E-07 51.8 6.1 37 27-63 4-40 (140)
309 1yvv_A Amine oxidase, flavin-c 96.3 0.01 3.5E-07 58.0 8.7 33 228-263 3-35 (336)
310 1coy_A Cholesterol oxidase; ox 96.3 0.0037 1.3E-07 65.3 5.6 36 29-64 10-45 (507)
311 2vou_A 2,6-dihydroxypyridine h 96.3 0.0026 8.9E-08 64.2 4.2 35 227-264 5-39 (397)
312 1gpe_A Protein (glucose oxidas 96.2 0.0037 1.3E-07 66.6 5.4 38 28-65 22-60 (587)
313 4b63_A L-ornithine N5 monooxyg 96.2 0.012 4.1E-07 61.4 8.9 35 30-64 246-282 (501)
314 3fim_B ARYL-alcohol oxidase; A 96.2 0.0026 8.9E-08 67.3 3.8 36 30-65 2-38 (566)
315 2zxi_A TRNA uridine 5-carboxym 96.2 0.0063 2.1E-07 64.6 6.7 48 348-396 126-179 (637)
316 2jbv_A Choline oxidase; alcoho 96.1 0.004 1.4E-07 65.8 4.8 37 29-65 12-49 (546)
317 3qvp_A Glucose oxidase; oxidor 96.1 0.0034 1.2E-07 66.6 4.2 35 29-63 18-53 (583)
318 3rp8_A Flavoprotein monooxygen 96.1 0.0067 2.3E-07 61.3 6.2 36 226-264 22-57 (407)
319 3qj4_A Renalase; FAD/NAD(P)-bi 96.0 0.015 5.2E-07 57.1 8.4 33 228-263 2-37 (342)
320 3cp8_A TRNA uridine 5-carboxym 96.0 0.0071 2.4E-07 64.4 6.3 33 228-263 22-54 (641)
321 1k0i_A P-hydroxybenzoate hydro 96.0 0.0074 2.5E-07 60.6 6.0 33 229-264 4-36 (394)
322 3nix_A Flavoprotein/dehydrogen 95.9 0.0048 1.6E-07 62.6 4.1 33 228-263 6-38 (421)
323 2i0z_A NAD(FAD)-utilizing dehy 95.8 0.002 7E-08 66.2 1.1 48 349-397 138-191 (447)
324 2gqf_A Hypothetical protein HI 95.8 0.0035 1.2E-07 63.5 2.7 34 228-264 5-38 (401)
325 2xdo_A TETX2 protein; tetracyc 95.8 0.017 5.9E-07 58.1 7.8 35 227-264 26-60 (398)
326 2g1u_A Hypothetical protein TM 95.7 0.011 3.7E-07 51.0 5.0 35 29-63 18-52 (155)
327 1id1_A Putative potassium chan 95.7 0.014 4.7E-07 50.2 5.7 34 29-62 2-35 (153)
328 4hb9_A Similarities with proba 95.7 0.024 8.2E-07 56.9 8.4 33 229-264 3-35 (412)
329 3ic5_A Putative saccharopine d 95.6 0.011 3.6E-07 48.0 4.4 34 29-62 4-38 (118)
330 1qo8_A Flavocytochrome C3 fuma 95.6 0.031 1E-06 59.2 9.1 34 228-264 122-155 (566)
331 1w4x_A Phenylacetone monooxyge 95.5 0.025 8.5E-07 59.6 8.1 35 30-64 186-220 (542)
332 3i3l_A Alkylhalidase CMLS; fla 95.5 0.014 4.8E-07 62.1 6.1 35 226-263 22-56 (591)
333 1y0p_A Fumarate reductase flav 95.5 0.037 1.3E-06 58.7 9.2 34 228-264 127-160 (571)
334 3atr_A Conserved archaeal prot 95.4 0.0079 2.7E-07 61.9 3.5 34 228-264 7-40 (453)
335 3llv_A Exopolyphosphatase-rela 95.4 0.018 6.3E-07 48.5 5.2 32 31-62 7-38 (141)
336 3dfz_A SIRC, precorrin-2 dehyd 95.3 0.013 4.4E-07 53.8 4.4 35 224-261 28-62 (223)
337 1lss_A TRK system potassium up 95.1 0.021 7.3E-07 47.7 4.8 32 31-62 5-36 (140)
338 3fmw_A Oxygenase; mithramycin, 95.0 0.01 3.6E-07 62.9 3.1 34 228-264 50-83 (570)
339 3e1t_A Halogenase; flavoprotei 94.8 0.014 4.9E-07 61.0 3.5 33 228-263 8-40 (512)
340 3pvc_A TRNA 5-methylaminomethy 94.7 0.07 2.4E-06 57.9 8.7 34 227-263 264-297 (689)
341 2hmt_A YUAA protein; RCK, KTN, 94.7 0.033 1.1E-06 46.7 4.9 32 31-62 7-38 (144)
342 3cgv_A Geranylgeranyl reductas 94.6 0.017 5.7E-07 57.9 3.4 33 229-264 6-38 (397)
343 3c96_A Flavin-containing monoo 94.5 0.029 9.9E-07 56.7 4.9 34 228-264 5-39 (410)
344 3ps9_A TRNA 5-methylaminomethy 94.4 0.18 6E-06 54.6 11.1 34 227-263 272-305 (676)
345 3c85_A Putative glutathione-re 94.3 0.044 1.5E-06 48.5 5.0 33 30-62 39-72 (183)
346 1d4d_A Flavocytochrome C fumar 94.3 0.11 3.7E-06 55.0 8.9 35 227-264 126-160 (572)
347 1f0y_A HCDH, L-3-hydroxyacyl-C 94.2 0.047 1.6E-06 52.7 5.4 33 31-63 16-48 (302)
348 4at0_A 3-ketosteroid-delta4-5a 94.1 0.11 3.9E-06 54.0 8.6 33 229-264 43-75 (510)
349 3i83_A 2-dehydropantoate 2-red 94.1 0.043 1.5E-06 53.5 5.0 34 29-62 1-34 (320)
350 4e12_A Diketoreductase; oxidor 94.1 0.049 1.7E-06 52.0 5.2 33 31-63 5-37 (283)
351 2qa2_A CABE, polyketide oxygen 93.9 0.056 1.9E-06 56.2 5.7 35 227-264 12-46 (499)
352 3ihg_A RDME; flavoenzyme, anth 93.9 0.069 2.3E-06 56.0 6.4 34 228-264 6-39 (535)
353 3hn2_A 2-dehydropantoate 2-red 93.8 0.048 1.6E-06 52.9 4.6 34 29-62 1-34 (312)
354 3dfz_A SIRC, precorrin-2 dehyd 93.8 0.055 1.9E-06 49.6 4.7 34 29-62 30-63 (223)
355 2qa1_A PGAE, polyketide oxygen 93.5 0.057 2E-06 56.2 4.8 35 227-264 11-45 (500)
356 3gg2_A Sugar dehydrogenase, UD 93.5 0.061 2.1E-06 55.0 4.9 35 30-64 2-36 (450)
357 3lk7_A UDP-N-acetylmuramoylala 93.4 0.068 2.3E-06 54.8 5.2 34 30-63 9-42 (451)
358 3l4b_C TRKA K+ channel protien 93.4 0.064 2.2E-06 49.0 4.4 32 32-63 2-33 (218)
359 4dio_A NAD(P) transhydrogenase 93.3 0.07 2.4E-06 53.4 4.9 33 31-63 191-223 (405)
360 3g17_A Similar to 2-dehydropan 93.2 0.063 2.2E-06 51.6 4.3 35 29-63 1-35 (294)
361 2x5o_A UDP-N-acetylmuramoylala 93.2 0.057 1.9E-06 55.2 4.2 35 31-65 6-40 (439)
362 3ius_A Uncharacterized conserv 93.1 0.068 2.3E-06 50.7 4.4 35 29-63 4-38 (286)
363 2ew2_A 2-dehydropantoate 2-red 92.9 0.086 2.9E-06 50.9 4.8 32 31-62 4-35 (316)
364 1y56_A Hypothetical protein PH 92.9 0.19 6.5E-06 52.1 7.6 46 114-190 267-312 (493)
365 1kyq_A Met8P, siroheme biosynt 92.8 0.061 2.1E-06 50.9 3.4 33 30-62 13-45 (274)
366 3ghy_A Ketopantoate reductase 92.8 0.11 3.6E-06 51.0 5.3 32 31-62 4-35 (335)
367 2uyy_A N-PAC protein; long-cha 92.6 0.12 4.3E-06 50.0 5.5 33 31-63 31-63 (316)
368 3p2y_A Alanine dehydrogenase/p 92.6 0.079 2.7E-06 52.5 4.0 33 31-63 185-217 (381)
369 3ado_A Lambda-crystallin; L-gu 92.5 0.12 4E-06 50.1 5.0 34 30-63 6-39 (319)
370 3k96_A Glycerol-3-phosphate de 92.4 0.13 4.4E-06 50.9 5.3 34 30-63 29-62 (356)
371 1z82_A Glycerol-3-phosphate de 92.4 0.11 3.9E-06 50.8 4.9 36 27-62 11-46 (335)
372 4gbj_A 6-phosphogluconate dehy 92.3 0.083 2.8E-06 50.8 3.7 36 29-64 4-39 (297)
373 1evy_A Glycerol-3-phosphate de 92.3 0.079 2.7E-06 52.6 3.7 36 28-63 12-48 (366)
374 2vns_A Metalloreductase steap3 92.3 0.14 4.8E-06 46.6 5.1 35 28-62 26-60 (215)
375 3gpi_A NAD-dependent epimerase 92.2 0.16 5.4E-06 48.2 5.6 34 30-63 3-36 (286)
376 3oj0_A Glutr, glutamyl-tRNA re 92.2 0.055 1.9E-06 45.8 2.0 33 30-62 21-53 (144)
377 3ego_A Probable 2-dehydropanto 92.1 0.12 4.2E-06 49.9 4.7 33 29-62 1-33 (307)
378 3dtt_A NADP oxidoreductase; st 92.1 0.14 4.7E-06 47.7 4.9 36 28-63 17-52 (245)
379 3g0o_A 3-hydroxyisobutyrate de 92.1 0.13 4.5E-06 49.5 4.9 35 29-63 6-40 (303)
380 2hjr_A Malate dehydrogenase; m 92.1 0.15 5E-06 49.8 5.3 35 29-63 13-48 (328)
381 2raf_A Putative dinucleotide-b 92.1 0.15 5.3E-06 46.1 5.1 34 31-64 20-53 (209)
382 3kkj_A Amine oxidase, flavin-c 92.1 0.071 2.4E-06 49.4 2.9 32 229-263 4-35 (336)
383 1ks9_A KPA reductase;, 2-dehyd 92.0 0.14 4.9E-06 48.6 5.0 32 32-63 2-33 (291)
384 3qha_A Putative oxidoreductase 92.0 0.12 4.1E-06 49.7 4.4 35 30-64 15-49 (296)
385 2dpo_A L-gulonate 3-dehydrogen 91.9 0.15 5E-06 49.6 5.0 33 31-63 7-39 (319)
386 2gmh_A Electron transfer flavo 91.9 0.11 3.8E-06 55.1 4.5 34 228-264 36-75 (584)
387 1pzg_A LDH, lactate dehydrogen 91.9 0.15 5.1E-06 49.9 5.0 33 31-63 10-43 (331)
388 1x13_A NAD(P) transhydrogenase 91.9 0.13 4.3E-06 51.9 4.6 34 30-63 172-205 (401)
389 1bg6_A N-(1-D-carboxylethyl)-L 91.9 0.14 4.7E-06 50.5 4.9 32 31-62 5-36 (359)
390 3doj_A AT3G25530, dehydrogenas 91.7 0.17 5.7E-06 49.0 5.2 33 31-63 22-54 (310)
391 1l7d_A Nicotinamide nucleotide 91.6 0.16 5.4E-06 50.8 5.0 34 30-63 172-205 (384)
392 2a9f_A Putative malic enzyme ( 91.6 0.12 4.2E-06 51.1 4.0 36 27-62 185-221 (398)
393 3r6d_A NAD-dependent epimerase 91.6 0.21 7.2E-06 45.3 5.5 35 29-63 4-40 (221)
394 1chu_A Protein (L-aspartate ox 91.6 0.28 9.6E-06 51.4 7.1 31 229-263 10-40 (540)
395 2y0c_A BCEC, UDP-glucose dehyd 91.5 0.15 5.3E-06 52.5 4.9 33 31-63 9-41 (478)
396 4ffl_A PYLC; amino acid, biosy 91.5 0.17 6E-06 50.0 5.2 34 31-64 2-35 (363)
397 1vl6_A Malate oxidoreductase; 91.4 0.15 5E-06 50.5 4.3 36 27-62 189-225 (388)
398 4ezb_A Uncharacterized conserv 91.3 0.15 5.1E-06 49.5 4.4 35 29-63 23-58 (317)
399 4huj_A Uncharacterized protein 91.3 0.11 3.7E-06 47.5 3.2 33 31-63 24-57 (220)
400 3k6j_A Protein F01G10.3, confi 91.3 0.23 7.8E-06 50.7 5.7 33 31-63 55-87 (460)
401 1pjc_A Protein (L-alanine dehy 91.1 0.18 6.1E-06 50.0 4.8 32 31-62 168-199 (361)
402 3phh_A Shikimate dehydrogenase 91.1 0.22 7.4E-06 47.0 5.0 33 30-62 118-150 (269)
403 1ur5_A Malate dehydrogenase; o 91.1 0.21 7.1E-06 48.3 5.1 33 30-62 2-35 (309)
404 3ggo_A Prephenate dehydrogenas 91.0 0.24 8.3E-06 48.0 5.5 36 28-63 31-68 (314)
405 1jw9_B Molybdopterin biosynthe 91.0 0.17 5.8E-06 47.3 4.2 33 31-63 32-65 (249)
406 3g79_A NDP-N-acetyl-D-galactos 91.0 0.2 6.7E-06 51.5 5.0 34 31-64 19-54 (478)
407 4a7p_A UDP-glucose dehydrogena 90.9 0.2 6.8E-06 51.1 4.9 36 30-65 8-43 (446)
408 1pjq_A CYSG, siroheme synthase 90.9 0.2 6.7E-06 51.4 4.9 34 225-261 10-43 (457)
409 1hdo_A Biliverdin IX beta redu 90.8 0.24 8.3E-06 44.0 5.0 33 31-63 4-37 (206)
410 3gt0_A Pyrroline-5-carboxylate 90.8 0.25 8.7E-06 45.9 5.3 33 30-62 2-38 (247)
411 2o3j_A UDP-glucose 6-dehydroge 90.8 0.18 6.1E-06 52.1 4.5 35 29-63 8-44 (481)
412 3l6d_A Putative oxidoreductase 90.8 0.32 1.1E-05 46.9 6.1 34 30-63 9-42 (306)
413 3pef_A 6-phosphogluconate dehy 90.8 0.21 7E-06 47.7 4.7 33 31-63 2-34 (287)
414 1lld_A L-lactate dehydrogenase 90.7 0.22 7.4E-06 48.3 4.9 32 31-62 8-41 (319)
415 3e8x_A Putative NAD-dependent 90.7 0.22 7.4E-06 45.7 4.7 34 29-62 20-54 (236)
416 3eag_A UDP-N-acetylmuramate:L- 90.7 0.22 7.4E-06 48.6 4.8 33 31-63 5-38 (326)
417 2p4q_A 6-phosphogluconate dehy 90.6 0.25 8.5E-06 51.1 5.4 36 28-63 8-43 (497)
418 2pv7_A T-protein [includes: ch 90.6 0.32 1.1E-05 46.7 5.9 35 29-63 20-55 (298)
419 3k5i_A Phosphoribosyl-aminoimi 90.5 0.21 7.2E-06 50.2 4.7 38 23-60 16-54 (403)
420 4dll_A 2-hydroxy-3-oxopropiona 90.5 0.23 7.8E-06 48.3 4.8 34 30-63 31-64 (320)
421 1zej_A HBD-9, 3-hydroxyacyl-CO 90.3 0.23 8E-06 47.5 4.6 33 30-63 12-44 (293)
422 1vpd_A Tartronate semialdehyde 90.3 0.21 7.1E-06 47.8 4.3 34 29-62 4-37 (299)
423 4e21_A 6-phosphogluconate dehy 90.2 0.25 8.5E-06 48.8 4.8 33 31-63 23-55 (358)
424 3orq_A N5-carboxyaminoimidazol 90.2 0.32 1.1E-05 48.4 5.7 35 30-64 12-46 (377)
425 3vtf_A UDP-glucose 6-dehydroge 90.1 0.26 9.1E-06 49.9 5.0 34 31-64 22-55 (444)
426 3c24_A Putative oxidoreductase 90.0 0.32 1.1E-05 46.3 5.3 33 31-63 12-45 (286)
427 1zcj_A Peroxisomal bifunctiona 90.0 0.3 1E-05 50.1 5.4 33 31-63 38-70 (463)
428 1nyt_A Shikimate 5-dehydrogena 90.0 0.27 9.3E-06 46.5 4.7 33 30-62 119-151 (271)
429 2eez_A Alanine dehydrogenase; 89.9 0.26 9E-06 48.9 4.8 32 31-62 167-198 (369)
430 2ewd_A Lactate dehydrogenase,; 89.9 0.26 8.9E-06 47.8 4.6 33 31-63 5-38 (317)
431 3vps_A TUNA, NAD-dependent epi 89.9 0.33 1.1E-05 46.6 5.3 36 29-64 6-42 (321)
432 2vhw_A Alanine dehydrogenase; 89.8 0.27 9.2E-06 49.0 4.8 33 30-62 168-200 (377)
433 3i6i_A Putative leucoanthocyan 89.8 0.31 1E-05 47.7 5.1 34 30-63 10-44 (346)
434 3tri_A Pyrroline-5-carboxylate 89.8 0.35 1.2E-05 45.9 5.4 34 30-63 3-39 (280)
435 2vvm_A Monoamine oxidase N; FA 89.8 0.36 1.2E-05 49.8 5.8 55 105-190 256-311 (495)
436 2egg_A AROE, shikimate 5-dehyd 89.7 0.27 9.3E-06 47.2 4.5 33 30-62 141-174 (297)
437 3pdu_A 3-hydroxyisobutyrate de 89.6 0.22 7.5E-06 47.5 3.8 33 31-63 2-34 (287)
438 1mv8_A GMD, GDP-mannose 6-dehy 89.6 0.25 8.4E-06 50.3 4.3 32 32-63 2-33 (436)
439 1yj8_A Glycerol-3-phosphate de 89.5 0.24 8.4E-06 49.2 4.2 34 31-64 22-62 (375)
440 3gvi_A Malate dehydrogenase; N 89.4 0.36 1.2E-05 46.9 5.2 34 30-63 7-41 (324)
441 3lk7_A UDP-N-acetylmuramoylala 89.4 0.68 2.3E-05 47.3 7.5 36 225-263 7-42 (451)
442 1n7h_A GDP-D-mannose-4,6-dehyd 89.4 0.34 1.1E-05 48.1 5.1 36 28-63 26-62 (381)
443 3slg_A PBGP3 protein; structur 89.4 0.3 1E-05 48.2 4.7 41 23-63 17-59 (372)
444 2x6t_A ADP-L-glycero-D-manno-h 89.3 0.35 1.2E-05 47.4 5.2 33 31-63 47-81 (357)
445 3don_A Shikimate dehydrogenase 89.3 0.33 1.1E-05 46.0 4.6 34 30-63 117-151 (277)
446 2rcy_A Pyrroline carboxylate r 89.2 0.34 1.2E-05 45.3 4.8 33 31-63 5-41 (262)
447 3l9w_A Glutathione-regulated p 89.2 0.37 1.3E-05 48.6 5.2 33 31-63 5-37 (413)
448 3qsg_A NAD-binding phosphogluc 89.2 0.27 9.3E-06 47.5 4.1 32 31-62 25-57 (312)
449 1t2d_A LDH-P, L-lactate dehydr 89.2 0.39 1.3E-05 46.7 5.2 33 31-63 5-38 (322)
450 2c5a_A GDP-mannose-3', 5'-epim 89.1 0.51 1.7E-05 46.8 6.3 34 30-63 29-63 (379)
451 2zyd_A 6-phosphogluconate dehy 89.1 0.33 1.1E-05 50.0 4.9 36 28-63 13-48 (480)
452 2v6b_A L-LDH, L-lactate dehydr 89.1 0.34 1.2E-05 46.6 4.7 31 32-62 2-34 (304)
453 3p7m_A Malate dehydrogenase; p 89.0 0.43 1.5E-05 46.3 5.4 34 30-63 5-39 (321)
454 1pjq_A CYSG, siroheme synthase 88.9 0.31 1.1E-05 49.9 4.5 33 30-62 12-44 (457)
455 3hwr_A 2-dehydropantoate 2-red 88.8 0.37 1.3E-05 46.7 4.8 32 30-62 19-50 (318)
456 2qyt_A 2-dehydropantoate 2-red 88.8 0.24 8.1E-06 47.8 3.4 31 31-61 9-45 (317)
457 2rir_A Dipicolinate synthase, 88.8 0.37 1.3E-05 46.2 4.8 34 29-62 156-189 (300)
458 1jay_A Coenzyme F420H2:NADP+ o 88.7 0.37 1.3E-05 43.4 4.5 32 32-63 2-34 (212)
459 3tl2_A Malate dehydrogenase; c 88.7 0.44 1.5E-05 46.1 5.2 32 31-62 9-41 (315)
460 3d4o_A Dipicolinate synthase s 88.7 0.38 1.3E-05 46.0 4.7 34 29-62 154-187 (293)
461 2h78_A Hibadh, 3-hydroxyisobut 88.6 0.33 1.1E-05 46.6 4.3 33 31-63 4-36 (302)
462 3qvo_A NMRA family protein; st 88.6 0.26 8.7E-06 45.3 3.4 37 27-63 20-58 (236)
463 3ouz_A Biotin carboxylase; str 88.6 0.28 9.5E-06 50.0 4.0 37 25-61 1-37 (446)
464 3ew7_A LMO0794 protein; Q8Y8U8 88.6 0.43 1.5E-05 42.9 4.9 32 32-63 2-34 (221)
465 3pid_A UDP-glucose 6-dehydroge 88.6 0.34 1.2E-05 49.0 4.4 33 31-64 37-69 (432)
466 1p77_A Shikimate 5-dehydrogena 88.6 0.28 9.7E-06 46.4 3.7 33 30-62 119-151 (272)
467 4g65_A TRK system potassium up 88.5 0.19 6.4E-06 51.6 2.5 33 31-63 4-36 (461)
468 1x0v_A GPD-C, GPDH-C, glycerol 88.3 0.22 7.6E-06 48.9 2.9 34 31-64 9-49 (354)
469 2r6j_A Eugenol synthase 1; phe 88.3 0.48 1.6E-05 45.6 5.3 35 29-63 10-45 (318)
470 1dlj_A UDP-glucose dehydrogena 88.2 0.33 1.1E-05 48.8 4.1 31 32-63 2-32 (402)
471 3d0o_A L-LDH 1, L-lactate dehy 88.2 0.41 1.4E-05 46.4 4.6 34 29-62 5-40 (317)
472 3q2o_A Phosphoribosylaminoimid 88.1 0.6 2.1E-05 46.5 6.0 34 30-63 14-47 (389)
473 3mog_A Probable 3-hydroxybutyr 88.1 0.49 1.7E-05 48.7 5.4 33 31-63 6-38 (483)
474 1txg_A Glycerol-3-phosphate de 88.1 0.35 1.2E-05 47.0 4.2 30 32-61 2-31 (335)
475 3ktd_A Prephenate dehydrogenas 88.0 0.57 2E-05 45.8 5.6 35 29-63 7-41 (341)
476 3m2p_A UDP-N-acetylglucosamine 88.0 0.46 1.6E-05 45.5 4.9 34 29-62 1-35 (311)
477 2ydy_A Methionine adenosyltran 87.9 0.41 1.4E-05 45.9 4.4 35 29-63 1-36 (315)
478 2aef_A Calcium-gated potassium 87.9 0.21 7.2E-06 46.0 2.2 33 30-63 9-41 (234)
479 1guz_A Malate dehydrogenase; o 87.9 0.48 1.7E-05 45.7 4.9 32 32-63 2-35 (310)
480 4id9_A Short-chain dehydrogena 87.9 0.52 1.8E-05 45.9 5.2 35 30-64 19-54 (347)
481 2g1u_A Hypothetical protein TM 87.8 0.4 1.4E-05 40.9 3.9 39 223-264 15-53 (155)
482 2hk9_A Shikimate dehydrogenase 87.8 0.4 1.4E-05 45.4 4.2 33 30-62 129-161 (275)
483 3gvp_A Adenosylhomocysteinase 87.8 0.39 1.3E-05 48.2 4.2 33 30-62 220-252 (435)
484 4e4t_A Phosphoribosylaminoimid 87.7 0.65 2.2E-05 46.9 6.0 35 30-64 35-69 (419)
485 3rui_A Ubiquitin-like modifier 87.7 0.51 1.7E-05 45.9 4.9 33 30-62 34-67 (340)
486 4gwg_A 6-phosphogluconate dehy 87.7 0.55 1.9E-05 48.3 5.4 33 31-63 5-37 (484)
487 3u62_A Shikimate dehydrogenase 87.7 0.55 1.9E-05 43.8 5.0 31 32-62 110-141 (253)
488 2gf2_A Hibadh, 3-hydroxyisobut 87.6 0.48 1.6E-05 45.2 4.7 32 32-63 2-33 (296)
489 3tnl_A Shikimate dehydrogenase 87.5 0.5 1.7E-05 45.6 4.8 33 30-62 154-187 (315)
490 2iz1_A 6-phosphogluconate dehy 87.5 0.55 1.9E-05 48.3 5.4 34 30-63 5-38 (474)
491 1y6j_A L-lactate dehydrogenase 87.5 0.54 1.8E-05 45.6 5.0 32 31-62 8-41 (318)
492 2f1k_A Prephenate dehydrogenas 87.5 0.51 1.8E-05 44.5 4.8 31 32-62 2-32 (279)
493 3c7a_A Octopine dehydrogenase; 87.5 0.3 1E-05 49.0 3.3 30 31-60 3-33 (404)
494 3h2s_A Putative NADH-flavin re 87.5 0.54 1.8E-05 42.5 4.8 31 32-62 2-33 (224)
495 3pwz_A Shikimate dehydrogenase 87.5 0.54 1.9E-05 44.4 4.8 33 30-62 120-153 (272)
496 3fbt_A Chorismate mutase and s 87.4 0.46 1.6E-05 45.1 4.4 33 30-62 122-155 (282)
497 3jyo_A Quinate/shikimate dehyd 87.4 0.53 1.8E-05 44.8 4.8 33 30-62 127-160 (283)
498 1zud_1 Adenylyltransferase THI 87.3 0.5 1.7E-05 44.1 4.4 33 30-62 28-61 (251)
499 2g5c_A Prephenate dehydrogenas 87.2 0.54 1.9E-05 44.4 4.8 32 31-62 2-35 (281)
500 4b4o_A Epimerase family protei 87.2 0.61 2.1E-05 44.4 5.2 35 32-66 2-37 (298)
No 1
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=1.4e-49 Score=417.10 Aligned_cols=365 Identities=20% Similarity=0.288 Sum_probs=289.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHH---CCCc---eEEEccCCCCCccccc----------------ccCcccccCCcCcee
Q 009897 29 MERKIAIIGAGVSGLLACKYTLE---NGFK---PIVFEARSGIGGVWSQ----------------TIESTKLQTPKSFYQ 86 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~---~g~~---v~v~e~~~~~GG~w~~----------------~~~~~~~~~~~~~~~ 86 (523)
|.+||+|||||++|+++|+.|++ .|++ |+|||+++.+||+|.+ .|+.++.+.++..+.
T Consensus 1 M~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~ 80 (464)
T 2xve_A 1 MATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLE 80 (464)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTC
T ss_pred CCCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcc
Confidence 45799999999999999999999 9999 9999999999999985 356677888888899
Q ss_pred eCCCCCCCC---CCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEE
Q 009897 87 FSDFAWPNS---VTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNV 163 (523)
Q Consensus 87 ~~~~~~~~~---~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 163 (523)
|++++++.. +...++++.++.+|++++++++++...++++++|+++++.. ..+.|.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~--------------------~~~~~~V 140 (464)
T 2xve_A 81 FADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNE--------------------DSQTFTV 140 (464)
T ss_dssp BTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEET--------------------TTTEEEE
T ss_pred cCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcC--------------------CCCcEEE
Confidence 998887531 13678899999999999999999855599999999999865 1247999
Q ss_pred EEeecccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHH
Q 009897 164 TVQEARNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVA 243 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a 243 (523)
++.++. +++..++.||+||+|||++ +.|++|++| |++.|.|.++|+.++.+. ..+.+|+|+|||+|.||+|+|
T Consensus 141 ~~~~~~--~g~~~~~~~d~VVvAtG~~-s~p~~p~ip---G~~~~~g~~~hs~~~~~~-~~~~~k~VvVVG~G~sg~eiA 213 (464)
T 2xve_A 141 TVQDHT--TDTIYSEEFDYVVCCTGHF-STPYVPEFE---GFEKFGGRILHAHDFRDA-LEFKDKTVLLVGSSYSAEDIG 213 (464)
T ss_dssp EEEETT--TTEEEEEEESEEEECCCSS-SSBCCCCCB---TTTTCCSEEEEGGGCCCG-GGGTTSEEEEECCSTTHHHHH
T ss_pred EEEEcC--CCceEEEEcCEEEECCCCC-CCCccCCCC---CcccCCceEEehhhhCCH-hHcCCCEEEEEcCCCCHHHHH
Confidence 987642 1223478999999999998 589999999 998899999999999876 457899999999999999999
Q ss_pred HHHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCC
Q 009897 244 AEVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFP 323 (523)
Q Consensus 244 ~~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (523)
.+|++.+.+ |+++.|++.. ++..
T Consensus 214 ~~l~~~g~~---V~li~~~~~~-~~~~----------------------------------------------------- 236 (464)
T 2xve_A 214 SQCYKYGAK---KLISCYRTAP-MGYK----------------------------------------------------- 236 (464)
T ss_dssp HHHHHTTCS---EEEEECSSCC-CCCC-----------------------------------------------------
T ss_pred HHHHHhCCe---EEEEEECCCC-CCCC-----------------------------------------------------
Confidence 999998754 9999987541 0000
Q ss_pred cccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecCceEEecCcEEEcCCceeeeccEEEEecCCCCCccccc
Q 009897 324 LKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSRSFTFCKNGLVIDGETTPLVTDIVIFATGYKSDEKLKN 403 (523)
Q Consensus 324 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~i~~~~~~~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~ 403 (523)
+ ..+|+++ ..|+++++++|+++||++ +++|.||+||||++++++++
T Consensus 237 -----------------------~---------~~~V~~~-~~V~~i~~~~V~~~dG~~-i~~D~Vi~atG~~p~~~~l~ 282 (464)
T 2xve_A 237 -----------------------W---------PENWDER-PNLVRVDTENAYFADGSS-EKVDAIILCTGYIHHFPFLN 282 (464)
T ss_dssp -----------------------C---------CTTEEEC-SCEEEECSSEEEETTSCE-EECSEEEECCCBCCCCTTBC
T ss_pred -----------------------C---------CCceEEc-CCeEEEeCCEEEECCCCE-EeCCEEEECCCCCCCCCCcC
Confidence 0 1346665 567888888999999998 99999999999999987644
Q ss_pred c-ccchhhhhhhcCCCcccccccccCCCCCeEEecccCCCCchhhHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Q 009897 404 I-FKSTYFQKQITGSSAPLYREGIHPQIPQLAILGYADSPSILRTTEMRSKCLAHFLAGNSNLPTIKEMEHNVMNWEKSM 482 (523)
Q Consensus 404 ~-~~~~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~~~~~~ae~Qa~~~a~~l~g~~~lp~~~~~~~~~~~~~~~~ 482 (523)
. ++.. .++. +...++|+++++++.|||||+|.+.....++.++.||+|+|++|.|+.+||+.++|.++++++.+.
T Consensus 283 ~~~gl~-~~~~--~~v~~~~~~~~~t~~p~i~aiGd~~~~~~~~~a~~qa~~~a~~l~G~~~lP~~~~m~~~~~~~~~~- 358 (464)
T 2xve_A 283 DDLRLV-TNNR--LWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAWYARDVIMGRLPLPSKEEMKADSMAWREK- 358 (464)
T ss_dssp TTTCCC-CCSS--SCCSSEETTTEESSSTTEEECSCSCCSSCHHHHHHHHHHHHHHHTTSSCCCCHHHHHHHHHHHHHH-
T ss_pred cccccc-cCCC--cccccccceEecCCCCCEEEEeCcccccchHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHH-
Confidence 2 1111 1110 011268999999999999999998777778999999999999999999999999999998887652
Q ss_pred HHhhCCCCCCCceeeecccchHHHHHhHcCCCCCccc
Q 009897 483 RLYAGESYRRSCVSVLLQKYSNDQLCKDMGCNSKKEK 519 (523)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~y~d~L~~d~g~~~~~~~ 519 (523)
.+.... ..++.. + +..|+|+|++++|+++.++.
T Consensus 359 ~~~~~~-~~~~~~--~-~~~Y~~~l~~~~g~~~~~~~ 391 (464)
T 2xve_A 359 ELTLVT-AEEMYT--Y-QGDYIQNLIDMTDYPSFDIP 391 (464)
T ss_dssp HHTCCS-HHHHHH--H-HHHHHHHHHTTSSSCCCCHH
T ss_pred hhccCC-CCCccc--c-HHHHHHHHHHHcCCCCCChH
Confidence 221100 011111 1 46799999999999987653
No 2
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=1.1e-47 Score=408.49 Aligned_cols=389 Identities=18% Similarity=0.293 Sum_probs=295.5
Q ss_pred CCCcEEEECCChHHHHHHHHHH-HCCCceEEEccCCCCCccccc-ccCcccccCCcCceeeCCCCC---CCCCCCCCCCh
Q 009897 29 MERKIAIIGAGVSGLLACKYTL-ENGFKPIVFEARSGIGGVWSQ-TIESTKLQTPKSFYQFSDFAW---PNSVTETFPDH 103 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~-~~g~~v~v~e~~~~~GG~w~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 103 (523)
+.+||+|||||++|+++|..|+ +.|++|+|||+++.+||+|.. .||+++++++...|.++..+. ...+...++++
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~ 86 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQ 86 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCH
Confidence 4579999999999999999999 899999999999999999986 899999999998888874310 01224567889
Q ss_pred hHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEE
Q 009897 104 NKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFV 183 (523)
Q Consensus 104 ~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~v 183 (523)
.++.+|++++++++++...++++++|++++++. ..+.|.|++.+++ ++.||+|
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~--------------------~~~~~~V~~~~G~-------~i~ad~l 139 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFKFGTEVTSALYLD--------------------DENLWEVTTDHGE-------VYRAKYV 139 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEESCCEEEEEEET--------------------TTTEEEEEETTSC-------EEEEEEE
T ss_pred HHHHHHHHHHHHHcCCcceeEeccEEEEEEEeC--------------------CCCEEEEEEcCCC-------EEEeCEE
Confidence 999999999999999877899999999999875 1357999988775 7999999
Q ss_pred EEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeec
Q 009897 184 ILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTV 263 (523)
Q Consensus 184 VlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~ 263 (523)
|+|||.+ +.|+.|++| |++.|.|..+|+..+... ....+|+|+|||+|.||+|+|.+|++.+. +||++.|++
T Consensus 140 V~AtG~~-s~p~~p~ip---G~~~f~g~~~~~~~~~~~-~~~~~krV~VIG~G~sgve~a~~l~~~~~---~Vtv~~r~~ 211 (540)
T 3gwf_A 140 VNAVGLL-SAINFPNLP---GLDTFEGETIHTAAWPEG-KSLAGRRVGVIGTGSTGQQVITSLAPEVE---HLTVFVRTP 211 (540)
T ss_dssp EECCCSC-CSBCCCCCT---TGGGCCSEEEEGGGCCSS-CCCTTSEEEEECCSHHHHHHHHHHTTTCS---EEEEEESSC
T ss_pred EECCccc-ccCCCCCCC---CccccCCCEEEeecCCCc-cccccceEEEECCCchHHHHHHHHHhhCC---EEEEEECCC
Confidence 9999998 589999999 999999999999988764 45789999999999999999999999865 499999999
Q ss_pred eeEecCccCCCcch----hhHHHHHH---HhcCC-C--------c----------hhHH----------HHHhh-----h
Q 009897 264 HWMVPDYFLWSTFR----SLNRWTEL---IIHNP-G--------E----------GFFS----------WLLAL-----S 302 (523)
Q Consensus 264 ~~~~p~~~~~~~~~----~~~r~~~~---~~~~~-~--------~----------~~~~----------~~~~~-----~ 302 (523)
.|++|..+..-... +...+..+ ..... + . ..+. ..+.. .
T Consensus 212 ~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~ 291 (540)
T 3gwf_A 212 QYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIAT 291 (540)
T ss_dssp CCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTT
T ss_pred CccccCccCCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhc
Confidence 99999875321111 11011111 00000 0 0 0000 00000 0
Q ss_pred hchHHHHHHHHHHHHHHhcCCc--ccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEE---ecCceEEecCcEEE
Q 009897 303 LSPLLWLSSKVVESCLKWTFPL--KKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLM---KSRSFTFCKNGLVI 377 (523)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~--~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~---~~~i~~~~~~~v~l 377 (523)
...+.....+.+...+...... ....+.|+ ++ +|+++.++++|++.+++++|+++ ...|+++++++|++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~-~~-----g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv~~ 365 (540)
T 3gwf_A 292 DEAANEAAASFIRAKVAEIIEDPETARKLMPK-GL-----FAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVT 365 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCC-SC-----CCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCC-CC-----CccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCeEEc
Confidence 1223344445555555544432 23346676 54 89999999999999999999999 67799999999999
Q ss_pred cCCceeeeccEEEEecCCCCCccccccc---cc--hhhhhhhcCCCcccccccccCCCCCeEEe-cccCC-CCchhhHHH
Q 009897 378 DGETTPLVTDIVIFATGYKSDEKLKNIF---KS--TYFQKQITGSSAPLYREGIHPQIPQLAIL-GYADS-PSILRTTEM 450 (523)
Q Consensus 378 ~dG~~~~~~D~VI~ATG~~~~~~l~~~~---~~--~~l~~~~~~~~~~ly~~~~~~~~p~l~~i-G~~~~-~~~~~~ae~ 450 (523)
+||++ +++|+||+||||+++......+ +. -.+.+.+.+ ....|+++..+++||+|++ |+..+ .+.+..+|.
T Consensus 366 ~dG~~-~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~-~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~ 443 (540)
T 3gwf_A 366 EDGVL-HELDVLVFATGFDAVDGNYRRIEIRGRDGLHINDHWDG-QPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIET 443 (540)
T ss_dssp TTCCE-EECSEEEECCCBSCSSHHHHTSEEECGGGCBHHHHTSS-SCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHH
T ss_pred CCCCE-EECCEEEECCccCccccCcCcceEECCCCcCHHHhhcc-ChhhccccccCCCCceEEEecCCCCCccHHHHHHH
Confidence 99999 9999999999999986322111 11 124555554 3489999999999999999 76543 344689999
Q ss_pred HHHHHHHHHc
Q 009897 451 RSKCLAHFLA 460 (523)
Q Consensus 451 Qa~~~a~~l~ 460 (523)
|++|++++|.
T Consensus 444 q~~~i~~~i~ 453 (540)
T 3gwf_A 444 QVEWISDTIG 453 (540)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 3
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=3.4e-47 Score=405.25 Aligned_cols=391 Identities=19% Similarity=0.286 Sum_probs=292.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc-ccCcccccCCcCceeeCCCCCC---CCCCCCCCCh
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ-TIESTKLQTPKSFYQFSDFAWP---NSVTETFPDH 103 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 103 (523)
++.+||+|||||++|+++|..|++.|++|+|||+++.+||+|.. .||+++++++...|+++..|.. ..+...++++
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~ 86 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQ 86 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCH
Confidence 45589999999999999999999999999999999999999986 9999999999998888754421 1235678899
Q ss_pred hHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEE
Q 009897 104 NKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFV 183 (523)
Q Consensus 104 ~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~v 183 (523)
.++.+|++++++++++...++++++|+++++++ ..+.|.|++.++. ++.||+|
T Consensus 87 ~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~--------------------~~~~w~V~~~~G~-------~~~ad~l 139 (545)
T 3uox_A 87 PEMLRYVNRAADAMDVRKHYRFNTRVTAARYVE--------------------NDRLWEVTLDNEE-------VVTCRFL 139 (545)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEG--------------------GGTEEEEEETTTE-------EEEEEEE
T ss_pred HHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeC--------------------CCCEEEEEECCCC-------EEEeCEE
Confidence 999999999999999977899999999999865 1367999988775 7999999
Q ss_pred EEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCch------hhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEE
Q 009897 184 ILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLA------AELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCT 257 (523)
Q Consensus 184 VlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~------~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt 257 (523)
|+|||.. +.|+.|++| |++.|.|..+|+..+... .....+|+|+|||+|.||+|+|.+|++.+. +||
T Consensus 140 V~AtG~~-s~p~~p~ip---G~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~---~Vt 212 (545)
T 3uox_A 140 ISATGPL-SASRMPDIK---GIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAK---ELY 212 (545)
T ss_dssp EECCCSC-BC---CCCT---TGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBS---EEE
T ss_pred EECcCCC-CCCcCCCCC---CccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCC---EEE
Confidence 9999987 589999999 999999999999987643 134579999999999999999999999865 499
Q ss_pred EEEeeceeEecCccCCCcc----hhhHHHHHHH---hcCC-C--------ch----------hHHH---------HHhh-
Q 009897 258 LLFKTVHWMVPDYFLWSTF----RSLNRWTELI---IHNP-G--------EG----------FFSW---------LLAL- 301 (523)
Q Consensus 258 ~~~r~~~~~~p~~~~~~~~----~~~~r~~~~~---~~~~-~--------~~----------~~~~---------~~~~- 301 (523)
++.|++.|++|..+..-.. .+..++..++ ...+ + .. .+.. ++..
T Consensus 213 v~~r~~~~i~p~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~ 292 (545)
T 3uox_A 213 VFQRTPNWCTPLGNSPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGF 292 (545)
T ss_dssp EEESSCCCCEECCCCBCCHHHHHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSB
T ss_pred EEEcCCCccccCCcCCCCHHHHHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhh
Confidence 9999999999876432111 1111111111 1000 0 00 0000 0000
Q ss_pred ----hhchHHHHHHHHHHHHHHhcCCc--ccCCCCC-CCcccccccCcceeecCcchhhhccCCCEEEE---ecCceEEe
Q 009897 302 ----SLSPLLWLSSKVVESCLKWTFPL--KKYNMIP-GHSFLNQISSCMFTVLPRNFYDRVQGGGLSLM---KSRSFTFC 371 (523)
Q Consensus 302 ----~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~p-~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~---~~~i~~~~ 371 (523)
...+......+.+...++..+.. ....+.| .+++ +|+++.++++|++.+++++|+++ .+.|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~-----g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it 367 (545)
T 3uox_A 293 RDLLLNKESNKFLADFVAKKIRQRVKDPVVAEKLIPKDHPF-----GAKRVPMETNYYETYNRDNVHLVDIREAPIQEVT 367 (545)
T ss_dssp TTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHTSCSSSCT-----TSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEE
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCC-----CCCccCCCccHHHHhcCCCEEEEecCCCCceEEc
Confidence 01223344445555555554432 2345777 5665 89999999999999999999999 56799999
Q ss_pred cCcEEEcCCceeeeccEEEEecCCCCCcccc---ccccc--hhhhhhhcCCCcccccccccCCCCCeEEe-cccCC---C
Q 009897 372 KNGLVIDGETTPLVTDIVIFATGYKSDEKLK---NIFKS--TYFQKQITGSSAPLYREGIHPQIPQLAIL-GYADS---P 442 (523)
Q Consensus 372 ~~~v~l~dG~~~~~~D~VI~ATG~~~~~~l~---~~~~~--~~l~~~~~~~~~~ly~~~~~~~~p~l~~i-G~~~~---~ 442 (523)
+++|+++|| + +++|+||+||||++..... ++.+. ..+.+.|.+. ...|+++..+++||+|++ |+..+ .
T Consensus 368 ~~gv~~~dG-~-~~~D~IV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~-~~~y~g~~~~gfPN~f~~~gp~~~~~~~ 444 (545)
T 3uox_A 368 PEGIKTADA-A-YDLDVIIYATGFDAVTGSLDRIDIRGKDNVRLIDAWAEG-PSTYLGLQARGFPNFFTLVGPHNGSTFC 444 (545)
T ss_dssp TTEEEESSC-E-EECSEEEECCCCBSSSCSCTTSEEECGGGCBHHHHTTTS-CCCBTTTBCTTCTTEEECSSGGGTGGGS
T ss_pred cCeEEeCCC-e-eecCEEEECCccccccccCCCceEECCCCccHHHhhccc-cceeeccccCCCCcEEEEeCCCCCCccc
Confidence 999999999 7 9999999999999754321 11111 1345555443 489999999999999998 55433 2
Q ss_pred CchhhHHHHHHHHHHHHc
Q 009897 443 SILRTTEMRSKCLAHFLA 460 (523)
Q Consensus 443 ~~~~~ae~Qa~~~a~~l~ 460 (523)
+....+|.|++|+++.|.
T Consensus 445 s~~~~~e~~~~~i~~~i~ 462 (545)
T 3uox_A 445 NVGVCGGLQAEWVLRMIS 462 (545)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 456789999999999874
No 4
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=8.9e-47 Score=402.34 Aligned_cols=389 Identities=20% Similarity=0.289 Sum_probs=294.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc-ccCcccccCCcCceeeCCCCC---CCCCCCCCCChh
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ-TIESTKLQTPKSFYQFSDFAW---PNSVTETFPDHN 104 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 104 (523)
+.+||+|||||++|+++|..|++.|++|+|||+++.+||+|.. .||++++++|...|.++..+. ...+...++++.
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ 99 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQP 99 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHH
Confidence 3479999999999999999999999999999999999999985 899999999999998875421 112356788999
Q ss_pred HHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEE
Q 009897 105 KVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVI 184 (523)
Q Consensus 105 ~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vV 184 (523)
++.+|++++++++++...++++++|++++++. ..+.|+|++.++. ++.||+||
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~--------------------~~~~w~V~~~~G~-------~i~ad~lV 152 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDE--------------------EGLRWTVRTDRGD-------EVSARFLV 152 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEET--------------------TTTEEEEEETTCC-------EEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcC--------------------CCCEEEEEECCCC-------EEEeCEEE
Confidence 99999999999999877899999999999875 1357999988775 79999999
Q ss_pred EeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCC-chhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeec
Q 009897 185 LCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDD-LAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTV 263 (523)
Q Consensus 185 lAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~-~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~ 263 (523)
+|||.+ +.|+.|++| |++.|.|..+|+..+. +. ..+.+|+|+|||+|.||+|+|.+|++.+.+ ||++.|++
T Consensus 153 ~AtG~~-s~p~~p~ip---G~~~f~g~~~~~~~~~~~~-~~~~~krV~VIG~G~sgve~a~~l~~~~~~---Vtv~~r~~ 224 (549)
T 4ap3_A 153 VAAGPL-SNANTPAFD---GLDRFTGDIVHTARWPHDG-VDFTGKRVGVIGTGSSGIQSIPIIAEQAEQ---LFVFQRSA 224 (549)
T ss_dssp ECCCSE-EECCCCCCT---TGGGCCSEEEEGGGCCTTC-CCCBTCEEEEECCSHHHHHHHHHHHHHBSE---EEEEESSC
T ss_pred ECcCCC-CCCCCCCCC---CcccCCCceEEeccccccc-cccCCCEEEEECCCchHHHHHHHHHhhCCE---EEEEECCC
Confidence 999987 479999999 9999999999999887 33 456899999999999999999999998754 99999999
Q ss_pred eeEecCccCCCcc----hhh---HHHHHHHhcCC-C--------ch------hHHHHHh------------h-----hhc
Q 009897 264 HWMVPDYFLWSTF----RSL---NRWTELIIHNP-G--------EG------FFSWLLA------------L-----SLS 304 (523)
Q Consensus 264 ~~~~p~~~~~~~~----~~~---~r~~~~~~~~~-~--------~~------~~~~~~~------------~-----~~~ 304 (523)
.|++|..+..-.. .+. ........... + .. ....++. . ...
T Consensus 225 ~~ilp~~~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~ 304 (549)
T 4ap3_A 225 NYSIPAGNVPLDDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDP 304 (549)
T ss_dssp CCEEECC----CHHHHHHHHHTHHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCH
T ss_pred CccccCcCCCCCHHHHHHHHhccHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCH
Confidence 9999986422110 000 01111110000 0 00 0000000 0 012
Q ss_pred hHHHHHHHHHHHHHHhcCCc--ccCCCCCC-CcccccccCcceeecCcchhhhccCCCEEEE---ecCceEEecCcEEEc
Q 009897 305 PLLWLSSKVVESCLKWTFPL--KKYNMIPG-HSFLNQISSCMFTVLPRNFYDRVQGGGLSLM---KSRSFTFCKNGLVID 378 (523)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~--~~~~l~p~-~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~---~~~i~~~~~~~v~l~ 378 (523)
.......+++...+...+.. ....+.|. +++ +|++++++++|++.+++++|+++ .+.|+++++++|+++
T Consensus 305 ~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~-----~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~gv~~~ 379 (549)
T 4ap3_A 305 AANDTARAFWEEKIRAVVDDPAVAELLTPKDHAI-----GAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVTT 379 (549)
T ss_dssp HHHHHHHHHHHHHHHHHCSCHHHHHHHSCSSCCB-----TTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTEEEES
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCC-----CccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCcEEeC
Confidence 23344445555555554422 22346776 665 89999999999999999999999 778999999999999
Q ss_pred CCceeeeccEEEEecCCCCCcc-cccc--ccc--hhhhhhhcCCCcccccccccCCCCCeEEe-cccCC---CCchhhHH
Q 009897 379 GETTPLVTDIVIFATGYKSDEK-LKNI--FKS--TYFQKQITGSSAPLYREGIHPQIPQLAIL-GYADS---PSILRTTE 449 (523)
Q Consensus 379 dG~~~~~~D~VI~ATG~~~~~~-l~~~--~~~--~~l~~~~~~~~~~ly~~~~~~~~p~l~~i-G~~~~---~~~~~~ae 449 (523)
|| + +++|+||+||||+++.. +..+ .+. ..+++.+.+ ....|+++..+++||+|++ |+..+ .+.+..+|
T Consensus 380 dG-~-~~~D~iI~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~-~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e 456 (549)
T 4ap3_A 380 GA-H-YDLDMIVLATGFDAMTGSLDKLEIVGRGGRTLKETWAA-GPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSE 456 (549)
T ss_dssp SC-E-EECSEEEECCCEEESSTTGGGSEEECGGGCBHHHHTTT-SCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHH
T ss_pred CC-c-eecCEEEECCcccccccccCceeEECCCCcCHHHhhcc-chhhccccccCCCCcEEEEeCCCCCCcCccHHHHHH
Confidence 99 7 99999999999998752 2221 111 124555554 3489999999999999998 65543 34568899
Q ss_pred HHHHHHHHHHc
Q 009897 450 MRSKCLAHFLA 460 (523)
Q Consensus 450 ~Qa~~~a~~l~ 460 (523)
.|++|+++.|.
T Consensus 457 ~~~~~i~~~i~ 467 (549)
T 4ap3_A 457 LHVDWVADAIA 467 (549)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 5
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=7.9e-46 Score=387.50 Aligned_cols=356 Identities=26% Similarity=0.321 Sum_probs=276.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC--ceEEEccCCCCCcccccc----------------------------------
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGF--KPIVFEARSGIGGVWSQT---------------------------------- 72 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~--~v~v~e~~~~~GG~w~~~---------------------------------- 72 (523)
+.+||+|||||++|+++|..|++.|. +|+|||+++.+||.|.+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 45899999999999999999999999 999999999999999872
Q ss_pred cCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCC
Q 009897 73 IESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTG 152 (523)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~ 152 (523)
|..++.+.+...+.|++++++.. ...++++.++.+|+++++++++. .++++++|++++...
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~--~i~~~t~V~~v~~~~---------------- 145 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQ-TLQFPHRHTIQEYQRIYAQPLLP--FIKLATDVLDIEKKD---------------- 145 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTT-CCSSCBHHHHHHHHHHHHGGGGG--GEECSEEEEEEEEET----------------
T ss_pred hhhhccCCCHHHhccCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhhC--eEEeCCEEEEEEeCC----------------
Confidence 12234455566777888888754 46788999999999999999866 799999999998754
Q ss_pred CCCCCCCCeEEEEeecccCCcc-eeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCC----CccEEecCCCCchhhhcCC
Q 009897 153 KPFSSSGKWNVTVQEARNVSSA-TEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVF----DGKVLHSMNDDLAAELING 227 (523)
Q Consensus 153 ~~~~~~~~~~v~~~~~~~~~~~-~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~----~g~~~h~~~~~~~~~~~~~ 227 (523)
+.|.|++.+.. +++ .+++.||+||+|||++ +.|++|++| |++.| .|.++|+.++.+. ..+.+
T Consensus 146 ------~~~~V~~~~~~--~G~~~~~~~~d~VVvAtG~~-s~p~~p~i~---G~~~~~~~~~g~v~~~~~~~~~-~~~~~ 212 (447)
T 2gv8_A 146 ------GSWVVTYKGTK--AGSPISKDIFDAVSICNGHY-EVPYIPNIK---GLDEYAKAVPGSVLHSSLFREP-ELFVG 212 (447)
T ss_dssp ------TEEEEEEEESS--TTCCEEEEEESEEEECCCSS-SSBCBCCCB---THHHHHHHSTTSEEEGGGCCCG-GGGTT
T ss_pred ------CeEEEEEeecC--CCCeeEEEEeCEEEECCCCC-CCCCCCCCC---ChhhhhccCCccEEEecccCCh-hhcCC
Confidence 56999987632 122 3368999999999998 589999998 87654 6789999999876 45789
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHH
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLL 307 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (523)
|+|+|||+|.||+|+|.+|++.+. +.||++.|++.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~--~~V~l~~r~~~~------------------------------------------ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAK--HPIYQSLLGGGD------------------------------------------ 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSC--SSEEEECTTCCS------------------------------------------
T ss_pred CEEEEEccCcCHHHHHHHHHHHhC--CcEEEEeCCCCc------------------------------------------
Confidence 999999999999999999998863 239999886542
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecCceEEe--cCcEEEcCCceeee
Q 009897 308 WLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSRSFTFC--KNGLVIDGETTPLV 385 (523)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~i~~~~--~~~v~l~dG~~~~~ 385 (523)
++..+|++ ...|+++. +++|+|+||++.++
T Consensus 249 -----------------------------------------------l~~~~i~~-~~~v~~~~~~~~~v~~~dG~~~~~ 280 (447)
T 2gv8_A 249 -----------------------------------------------IQNESLQQ-VPEITKFDPTTREIYLKGGKVLSN 280 (447)
T ss_dssp -----------------------------------------------CBCSSEEE-ECCEEEEETTTTEEEETTTEEECC
T ss_pred -----------------------------------------------CCCCCeEE-ecCeEEEecCCCEEEECCCCEecc
Confidence 11234443 23567774 45799999986468
Q ss_pred ccEEEEecCCCCCccc-----cccccchhhhhhhcCC--CcccccccccCCCCCeEEecccCCCCchhhHHHHHHHHHHH
Q 009897 386 TDIVIFATGYKSDEKL-----KNIFKSTYFQKQITGS--SAPLYREGIHPQIPQLAILGYADSPSILRTTEMRSKCLAHF 458 (523)
Q Consensus 386 ~D~VI~ATG~~~~~~l-----~~~~~~~~l~~~~~~~--~~~ly~~~~~~~~p~l~~iG~~~~~~~~~~ae~Qa~~~a~~ 458 (523)
+|.||+||||++++++ ++.+... ...++ ..++|+++++++.|+|||+|.+.....++.++.||+|+|++
T Consensus 281 ~D~vi~atG~~~~~~~l~~~~l~~~~~~----i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~~~~~a~~qa~~~a~~ 356 (447)
T 2gv8_A 281 IDRVIYCTGYLYSVPFPSLAKLKSPETK----LIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVVPFPTSQAQAAFLARV 356 (447)
T ss_dssp CSEEEECCCBCCCCCCHHHHSCCSTTTC----CCSSSSSCCSEETTTEETTCTTEEESSCCBSSCHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCcCCCCCcccccccccCc----eecCCCcccccccccccCCCCcEEEEeccccccCchHHHHHHHHHHHH
Confidence 9999999999999876 4322101 11111 12789999999999999999988777789999999999999
Q ss_pred HcCCCCCCCHHHHHHHHHHHHHHHHHhhCCCCCCCceeeecccchHHHHHhHcCCCC
Q 009897 459 LAGNSNLPTIKEMEHNVMNWEKSMRLYAGESYRRSCVSVLLQKYSNDQLCKDMGCNS 515 (523)
Q Consensus 459 l~g~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~L~~d~g~~~ 515 (523)
|.|+.+||+.++|.+++.+..+.+. ...+ +.|.+...++..|+|+|++.+|..+
T Consensus 357 ~~g~~~lp~~~~m~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~y~~~l~~~~~~~~ 410 (447)
T 2gv8_A 357 WSGRLKLPSKEEQLKWQDELMFSLS-GANN--MYHSLDYPKDATYINKLHDWCKQAT 410 (447)
T ss_dssp HTTSSCCCCHHHHHHHHHHHHHHHT-TCGG--GTTBCTTTHHHHHHHHHHHHHHTCS
T ss_pred HcCCCCCcCHHHHHHHHHHHHHHhc-CCCc--ceeecCCccHHHHHHHHHHHhCccc
Confidence 9999999999999998877544311 1111 1244431225789999999998764
No 6
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=2.6e-45 Score=392.19 Aligned_cols=416 Identities=19% Similarity=0.263 Sum_probs=302.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc-ccCcccccCCcCceeeCCCCC---CCCCCCCCCChh
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ-TIESTKLQTPKSFYQFSDFAW---PNSVTETFPDHN 104 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 104 (523)
..+||+|||||++|+++|..|++.|++|+|||+++.+||+|.. .||+++++.+...+.++..+. ...+...++++.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 4589999999999999999999999999999999999999986 899999999988887774331 011235688999
Q ss_pred HHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEE
Q 009897 105 KVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVI 184 (523)
Q Consensus 105 ~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vV 184 (523)
++.+|++.+++++++...++++++|+++++++ ..+.|+|++.++. ++.||+||
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~--------------------~~~~w~V~~~~G~-------~~~ad~vV 147 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDE--------------------ATNTWTVDTNHGD-------RIRARYLI 147 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEET--------------------TTTEEEEEETTCC-------EEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcC--------------------CCCeEEEEECCCC-------EEEeCEEE
Confidence 99999999999998766899999999999865 1357999987664 78999999
Q ss_pred EeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 185 LCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 185 lAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
+|||.. +.|++|++| |++.|.|.++|+..+......+.+|+|+|||+|.||+|++..++..+.+ |+++.|++.
T Consensus 148 ~AtG~~-s~p~~p~i~---G~~~f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~---vtv~~r~~~ 220 (542)
T 1w4x_A 148 MASGQL-SVPQLPNFP---GLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAE---LFVFQRTPH 220 (542)
T ss_dssp ECCCSC-CCCCCCCCT---TGGGCCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSE---EEEEESSCC
T ss_pred ECcCCC-CCCCCCCCC---CcccCCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCce---EEEEEcCCc
Confidence 999998 589999999 9999999999999876321346799999999999999999999998754 999999999
Q ss_pred eEecCccCC-Ccc---hh---hHHHHHHHhcC----C-------Cc----hhHHHHHhhh-----------------hch
Q 009897 265 WMVPDYFLW-STF---RS---LNRWTELIIHN----P-------GE----GFFSWLLALS-----------------LSP 305 (523)
Q Consensus 265 ~~~p~~~~~-~~~---~~---~~r~~~~~~~~----~-------~~----~~~~~~~~~~-----------------~~~ 305 (523)
|++|..+.. ... .+ +..+.+..... | .. .....++... ...
T Consensus 221 ~~~p~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~ 300 (542)
T 1w4x_A 221 FAVPARNAPLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRD 300 (542)
T ss_dssp CEEECCCCBCCHHHHHHHHTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHH
T ss_pred ccccCCCCCCCHHHHHHHHhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChH
Confidence 988875421 100 00 11111111100 0 00 0000011000 011
Q ss_pred HHHHHHHHHHHHHHhcCC--cccCCCCC-CCcccccccCcceeecCcchhhhccCCCEEEE---ecCceEEecCcEEEcC
Q 009897 306 LLWLSSKVVESCLKWTFP--LKKYNMIP-GHSFLNQISSCMFTVLPRNFYDRVQGGGLSLM---KSRSFTFCKNGLVIDG 379 (523)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~--~~~~~l~p-~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~---~~~i~~~~~~~v~l~d 379 (523)
......+++...++.... .....+.| ++++ +|++++++++|++.+++++|+++ ...|+++++++|+++|
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~~~~-----~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv~~~d 375 (542)
T 1w4x_A 301 ANERVAEFIRNKIRNTVRDPEVAERLVPKGYPF-----GTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSE 375 (542)
T ss_dssp HHHHHHHHHHHHHHHHCSSHHHHHHHSCCSSCS-----SSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEEEESS
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHhcCCCCCCc-----cccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeEEeCC
Confidence 223334445555544432 22345667 4554 89999999999999999999998 5679999999999999
Q ss_pred CceeeeccEEEEecCCCCCcccccccc---c--hhhhhhhcCCCcccccccccCCCCCeEEe-cccCC---CCchhhHHH
Q 009897 380 ETTPLVTDIVIFATGYKSDEKLKNIFK---S--TYFQKQITGSSAPLYREGIHPQIPQLAIL-GYADS---PSILRTTEM 450 (523)
Q Consensus 380 G~~~~~~D~VI~ATG~~~~~~l~~~~~---~--~~l~~~~~~~~~~ly~~~~~~~~p~l~~i-G~~~~---~~~~~~ae~ 450 (523)
++ +++|+||+||||+++..+..-++ . ..+.+.+.. ....|+.+..+++||+|++ |...+ .+....+|.
T Consensus 376 -~~-~~~D~ii~atG~~~~~~~~~~~~i~g~~G~~l~~~w~~-~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~ 452 (542)
T 1w4x_A 376 -RE-YELDSLVLATGFDALTGALFKIDIRGVGNVALKEKWAA-GPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQ 452 (542)
T ss_dssp -CE-EECSEEEECCCCCCTTHHHHTSEEECGGGCBHHHHTTT-SCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHH
T ss_pred -eE-EecCEEEEcCCccccccCcCceeeECCCCCCHHHhhcC-chheecccccCCCCceEEEcCCCCCcccccHHHHHHH
Confidence 77 99999999999998643322111 1 123344433 2378999999999999998 87743 234588999
Q ss_pred HHHHHHHHHcCCC--CCCCHHHHHHHHHHHHHHHHHhh
Q 009897 451 RSKCLAHFLAGNS--NLPTIKEMEHNVMNWEKSMRLYA 486 (523)
Q Consensus 451 Qa~~~a~~l~g~~--~lp~~~~~~~~~~~~~~~~~~~~ 486 (523)
|++|+++.|.... .+.+.+.+.+..+.|++.+++..
T Consensus 453 q~~~ia~~i~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 490 (542)
T 1w4x_A 453 HVEWVTDHIAYMFKNGLTRSEAVLEKEDEWVEHVNEIA 490 (542)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEECHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCeEEEECHHHHHHHHHHHHHHH
Confidence 9999999875432 23344445555556665555443
No 7
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2.1e-37 Score=313.23 Aligned_cols=344 Identities=19% Similarity=0.256 Sum_probs=252.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.|...|+.+.+..+...+.+++++.+.. ...++++.++.+|
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPAS-QGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCC-SSSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCC-ccCCCCHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999998887744 5678889999999
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeE-EEEeecccCCcceeEEEeCEEEEeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWN-VTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
+.++++++++ .++++++|++++... +.|. |++.++ ++.||+||+|||
T Consensus 82 l~~~~~~~~~--~~~~~~~v~~i~~~~----------------------~~~~~v~~~~g--------~~~~d~vV~AtG 129 (357)
T 4a9w_A 82 LAQYEQKYAL--PVLRPIRVQRVSHFG----------------------ERLRVVARDGR--------QWLARAVISATG 129 (357)
T ss_dssp HHHHHHHTTC--CEECSCCEEEEEEET----------------------TEEEEEETTSC--------EEEEEEEEECCC
T ss_pred HHHHHHHcCC--EEEcCCEEEEEEECC----------------------CcEEEEEeCCC--------EEEeCEEEECCC
Confidence 9999999999 799999999999865 5687 765443 799999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEec
Q 009897 189 RYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVP 268 (523)
Q Consensus 189 ~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p 268 (523)
.. +.|.+|.+| |.+.+.+..+|+..+... ..+.+++|+|||+|.+|+|+|..|++.+ . |+++.|++.++.|
T Consensus 130 ~~-~~~~~~~~~---g~~~~~~~~~~~~~~~~~-~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~---v~~v~~~~~~~~~ 200 (357)
T 4a9w_A 130 TW-GEAYTPEYQ---GLESFAGIQLHSAHYSTP-APFAGMRVAIIGGGNSGAQILAEVSTVA-E---TTWITQHEPAFLA 200 (357)
T ss_dssp SG-GGBCCCCCT---TGGGCCSEEEEGGGCCCS-GGGTTSEEEEECCSHHHHHHHHHHTTTS-E---EEEECSSCCCBCC
T ss_pred CC-CCCCCCCCC---CccccCCcEEEeccCCCh-hhcCCCEEEEECCCcCHHHHHHHHHhhC-C---EEEEECCCCeecc
Confidence 88 478889898 988899999999988876 4578999999999999999999999875 2 9999998665666
Q ss_pred CccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecC
Q 009897 269 DYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLP 348 (523)
Q Consensus 269 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~ 348 (523)
.... + ..+. +...+.+... ....+.+... .......+.
T Consensus 201 ~~~~-~-----~~~~------------------------~~~~~~~~~~-------~~~~~~~~~~-----~~~~~~~~~ 238 (357)
T 4a9w_A 201 DDVD-G-----RVLF------------------------ERATERWKAQ-------QEGREPDLPP-----GGFGDIVMV 238 (357)
T ss_dssp TTCC-T-----HHHH------------------------TC----------------------------------CBCCC
T ss_pred hhhc-C-----ccHH------------------------HHHHHHHhcc-------ccccCCCccc-----ccccCcccC
Confidence 5420 1 0000 0000000000 0000000000 011122345
Q ss_pred cchhhhccCCCEEEEecCceEEecCcEEEcCCceeeeccEEEEecCCCCCccccccccchhhhhhhcCCCcccccc-ccc
Q 009897 349 RNFYDRVQGGGLSLMKSRSFTFCKNGLVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQITGSSAPLYRE-GIH 427 (523)
Q Consensus 349 ~~~~~~~~~g~v~v~~~~i~~~~~~~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~~~~~ly~~-~~~ 427 (523)
+.+.+.++.+.+.. ...+.+++.++++++||++ +++|.||+|||++|+.++++.++...-+..+ ..... ++.
T Consensus 239 ~~~~~~~~~g~i~~-~~~v~~~~~~~v~~~~g~~-i~~D~vi~a~G~~p~~~~l~~~gl~~~~G~i-----~vd~~~l~~ 311 (357)
T 4a9w_A 239 PPVLDARARGVLAA-VPPPARFSPTGMQWADGTE-RAFDAVIWCTGFRPALSHLKGLDLVTPQGQV-----EVDGSGLRA 311 (357)
T ss_dssp HHHHHHHHTTCCCE-ECCCSEEETTEEECTTSCE-EECSEEEECCCBCCCCGGGTTTTCBCTTSCB-----CBCTTSCBB
T ss_pred hhHHHHHhcCceEE-ecCcceEeCCeeEECCCCE-ecCCEEEECCCcCCCCcccCcccccCCCCCc-----cccCCcccC
Confidence 56666777777543 3457888999999999998 9999999999999997665432221001111 11112 366
Q ss_pred CCCCCeEEec--ccCC--CCchhhHHHHHHHHHHHHcCCCC
Q 009897 428 PQIPQLAILG--YADS--PSILRTTEMRSKCLAHFLAGNSN 464 (523)
Q Consensus 428 ~~~p~l~~iG--~~~~--~~~~~~ae~Qa~~~a~~l~g~~~ 464 (523)
++.||||++| .+.. ......+..||+.+|..+...+.
T Consensus 312 t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 312 LAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp SSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC
T ss_pred CCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHH
Confidence 7899999999 4443 23456788888888777655443
No 8
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=7.7e-33 Score=281.60 Aligned_cols=322 Identities=21% Similarity=0.277 Sum_probs=216.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccCCCCCcccccccCcccccCCcC---ceeeCCCCCCCC-------CCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEARSGIGGVWSQTIESTKLQTPKS---FYQFSDFAWPNS-------VTE 98 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~~~~GG~w~~~~~~~~~~~~~~---~~~~~~~~~~~~-------~~~ 98 (523)
.+||+|||||++|+++|..|++.|+ +|+|||+++ +||.|........+..+.. .+.+.++..... ...
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 4799999999999999999999999 999999988 9999976333322222221 111111111100 013
Q ss_pred CCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEE
Q 009897 99 TFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAY 178 (523)
Q Consensus 99 ~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 178 (523)
.++.+.++.+|++++++++++ .++++++|++++... +.|.|.+.++ ++
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~g--------~~ 130 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYEL--NIFENTVVTNISADD----------------------AYYTIATTTE--------TY 130 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTC--EEECSCCEEEEEECS----------------------SSEEEEESSC--------CE
T ss_pred cCCCHHHHHHHHHHHHHHcCC--eEEeCCEEEEEEECC----------------------CeEEEEeCCC--------EE
Confidence 456778999999999999998 799999999999864 4688876543 58
Q ss_pred EeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEE
Q 009897 179 QVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTL 258 (523)
Q Consensus 179 ~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~ 258 (523)
.||+||+|||+.+ .| .+| + +..+|+..+.+. ..+.+++|+|||+|.+|+|+|..|++.+. +||+
T Consensus 131 ~~d~vVlAtG~~~-~p---~ip---~-----~~~~~~~~~~~~-~~~~~~~vvVvG~G~~g~e~a~~l~~~g~---~V~l 194 (369)
T 3d1c_A 131 HADYIFVATGDYN-FP---KKP---F-----KYGIHYSEIEDF-DNFNKGQYVVIGGNESGFDAAYQLAKNGS---DIAL 194 (369)
T ss_dssp EEEEEEECCCSTT-SB---CCC---S-----SSCEEGGGCSCG-GGSCSSEEEEECCSHHHHHHHHHHHHTTC---EEEE
T ss_pred EeCEEEECCCCCC-cc---CCC---C-----CceechhhcCCh-hhcCCCEEEEECCCcCHHHHHHHHHhcCC---eEEE
Confidence 9999999999872 34 455 4 356888877765 45678999999999999999999999875 4999
Q ss_pred EEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCccccc
Q 009897 259 LFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQ 338 (523)
Q Consensus 259 ~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~ 338 (523)
+.|++.+..+..++.- .. .
T Consensus 195 v~~~~~~~~~~~d~~~--~~----------------------------~------------------------------- 213 (369)
T 3d1c_A 195 YTSTTGLNDPDADPSV--RL----------------------------S------------------------------- 213 (369)
T ss_dssp ECC----------CTT--SC----------------------------C-------------------------------
T ss_pred EecCCCCCCCCCCCCc--cC----------------------------C-------------------------------
Confidence 9998765433221000 00 0
Q ss_pred ccCcceeecCcchhhhccCCC-EEEEecC-ceEE--ecCc--EEEcCCceeee-ccEEEEecCCCCCccccccccchhhh
Q 009897 339 ISSCMFTVLPRNFYDRVQGGG-LSLMKSR-SFTF--CKNG--LVIDGETTPLV-TDIVIFATGYKSDEKLKNIFKSTYFQ 411 (523)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~g~-v~v~~~~-i~~~--~~~~--v~l~dG~~~~~-~D~VI~ATG~~~~~~l~~~~~~~~l~ 411 (523)
+...+.+.+.+++.+ |+++.+. +.++ ++++ |++.||++ +. +|.||+|||++++..++. ...+.
T Consensus 214 ------~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~-~~~~d~vi~a~G~~~~~~~~~---~~~~~ 283 (369)
T 3d1c_A 214 ------PYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQS-VHTPHEPILATGFDATKNPIV---QQLFV 283 (369)
T ss_dssp ------HHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCC-EEESSCCEECCCBCGGGSHHH---HHHSC
T ss_pred ------HHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeE-eccCCceEEeeccCCccchhh---hhhcc
Confidence 001112223445554 8888774 7777 3443 77889987 65 699999999999874321 11111
Q ss_pred hhhcCCCcccccccccCCCCCeEEecccCCCC-----chhhHHHHHHHHHHHHcCCCCCCCHHHHHH
Q 009897 412 KQITGSSAPLYREGIHPQIPQLAILGYADSPS-----ILRTTEMRSKCLAHFLAGNSNLPTIKEMEH 473 (523)
Q Consensus 412 ~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~~-----~~~~ae~Qa~~~a~~l~g~~~lp~~~~~~~ 473 (523)
. ...........+.++.||||++|.+.... .+..++.||+++|++|.|+..+|+.++|.+
T Consensus 284 -~-~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~~~~p~~~~~~~ 348 (369)
T 3d1c_A 284 -T-TNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIE 348 (369)
T ss_dssp -C-TTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHHTTCCCCHHHHH
T ss_pred -C-CCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcccCCCCcchHHH
Confidence 0 00001223334567899999999865421 234678999999999999999998765553
No 9
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=100.00 E-value=6.7e-33 Score=292.88 Aligned_cols=329 Identities=15% Similarity=0.153 Sum_probs=196.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--------------ceEEEccCCCCCccccc--ccCcccccCCc--Cc--------
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGF--------------KPIVFEARSGIGGVWSQ--TIESTKLQTPK--SF-------- 84 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~--------------~v~v~e~~~~~GG~w~~--~~~~~~~~~~~--~~-------- 84 (523)
+||+||||||+||++|..|.+.|. ..+.+|+.+.++ |+. .+|+.+++++. .+
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s 117 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRDPRS 117 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTCTTC
T ss_pred CcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccCCCC
Confidence 799999999999999999987543 456777776665 765 58888888752 11
Q ss_pred -eeeCC--------CCCCCCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCC
Q 009897 85 -YQFSD--------FAWPNSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPF 155 (523)
Q Consensus 85 -~~~~~--------~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~ 155 (523)
|+|.. +++.. +...||++.++.+||++++++++. .|+|+++|++|++..... ..
T Consensus 118 ~~sf~~yl~~~~rl~~f~~-~~~~~p~r~E~~~Yl~~~A~~~~~--~vrf~~~V~~v~~~~~~~--------------~~ 180 (501)
T 4b63_A 118 SFTFLNYLHQKGRLIHFTN-LSTFLPARLEFEDYMRWCAQQFSD--VVAYGEEVVEVIPGKSDP--------------SS 180 (501)
T ss_dssp TTSHHHHHHHHTCHHHHHT-TCCSCCBHHHHHHHHHHHHHTTGG--GEEESEEEEEEEEECSST--------------TS
T ss_pred ccchHHHHHHhCCccCCcc-ccCCCCCHHHHHHHHHHHHHHcCC--ceEcceEEEeeccccccc--------------cc
Confidence 22110 01111 246789999999999999999886 899999999999875110 00
Q ss_pred CCCCCeEEEEeecccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchh-----hhcCCCEE
Q 009897 156 SSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAA-----ELINGKRV 230 (523)
Q Consensus 156 ~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~-----~~~~~k~V 230 (523)
...+.|+|++.++. +++..++.++.||+|||. .|++|. ...|.|+++|+.+|.+.. ..++||+|
T Consensus 181 ~~~~~~~V~~~~~~--~g~~~~~~ar~vVlatG~---~P~iP~------~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV 249 (501)
T 4b63_A 181 SVVDFFTVRSRNVE--TGEISARRTRKVVIAIGG---TAKMPS------GLPQDPRIIHSSKYCTTLPALLKDKSKPYNI 249 (501)
T ss_dssp SCBCEEEEEEEETT--TCCEEEEEEEEEEECCCC---EECCCT------TSCCCTTEEEGGGHHHHHHHHSCCTTSCCEE
T ss_pred cccceEEEEEecCC--CceEEEEEeCEEEECcCC---CCCCCC------CCCCCcceeeccccccchhhccccccCCcEE
Confidence 11246999998875 445568999999999994 477764 345788999999987531 34789999
Q ss_pred EEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHH--hhh-hc-hH
Q 009897 231 TVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLL--ALS-LS-PL 306 (523)
Q Consensus 231 ~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~-~~-~~ 306 (523)
+|||+|.||+|++.+|++.... .+|++++|++.|+.....+++...+...+.+.+...|......... ... .. .-
T Consensus 250 ~VVG~G~SA~ei~~~L~~~~~~-~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~ 328 (501)
T 4b63_A 250 AVLGSGQSAAEIFHDLQKRYPN-SRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVR 328 (501)
T ss_dssp EEECCSHHHHHHHHHHHHHSTT-CEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBC
T ss_pred EEECCcHHHHHHHHHHHhcCCC-ceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccC
Confidence 9999999999999999986443 5699999998765444333332233333333333333211110000 000 00 00
Q ss_pred HHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecCceEEecCcEEEcCCceeeec
Q 009897 307 LWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSRSFTFCKNGLVIDGETTPLVT 386 (523)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~i~~~~~~~v~l~dG~~~~~~ 386 (523)
..+..........+..... ....+.+.+. +....... ......+++++.. .+.+++++++.+.||++ +++
T Consensus 329 ~~li~~i~~~~y~~~~~~~-~~~~~~~~l~-----~~~~v~~~--~~~~~~~~~~v~~-~~~~~~~~~v~~~dg~~-~~~ 398 (501)
T 4b63_A 329 LELIEEIYNDMYLQRVKNP-DETQWQHRIL-----PERKITRV--EHHGPQSRMRIHL-KSSKPESEGAANDVKET-LEV 398 (501)
T ss_dssp HHHHHHHHHHHHHHHHHCS-CGGGCSSEEE-----CSEEEEEE--ECCSSSSCEEEEE-EESCC--------CCCE-EEE
T ss_pred HHHHHHHHHHHHhhccCCC-cccccceeec-----CCcceeee--eecCCCCeEEEEe-eeeEEeCCeeEeCCCeE-EEC
Confidence 1111111111111111000 0000001100 00011110 1122345555543 23556778899999999 999
Q ss_pred cEEEEecCCCCCcc
Q 009897 387 DIVIFATGYKSDEK 400 (523)
Q Consensus 387 D~VI~ATG~~~~~~ 400 (523)
|+||+||||+++.+
T Consensus 399 D~VI~ATGy~~~~p 412 (501)
T 4b63_A 399 DALMVATGYNRNAH 412 (501)
T ss_dssp SEEEECCCEECCTH
T ss_pred CEEEECcCCCCCCc
Confidence 99999999998853
No 10
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=5.8e-32 Score=274.39 Aligned_cols=298 Identities=16% Similarity=0.210 Sum_probs=211.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
+.+||+|||||++|+++|..|++.|++|+|||+.+.+||.|...+|...+ +.+..+ ......++.+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~------~~~~~~--------~~~~~~~~~~ 78 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHI------YDVAGF--------PEVPAIDLVE 78 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEE------CCSTTC--------SSEEHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCccc------ccCCCC--------CCCCHHHHHH
Confidence 45899999999999999999999999999999999999999765554321 111111 1124578899
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
++.++++++++ .++++++|+.++... ++.|.|++.++. ++.||+||+|||
T Consensus 79 ~l~~~~~~~~~--~~~~~~~v~~i~~~~---------------------~~~~~v~~~~g~-------~~~~~~li~AtG 128 (360)
T 3ab1_A 79 SLWAQAERYNP--DVVLNETVTKYTKLD---------------------DGTFETRTNTGN-------VYRSRAVLIAAG 128 (360)
T ss_dssp HHHHHHHTTCC--EEECSCCEEEEEECT---------------------TSCEEEEETTSC-------EEEEEEEEECCT
T ss_pred HHHHHHHHhCC--EEEcCCEEEEEEECC---------------------CceEEEEECCCc-------EEEeeEEEEccC
Confidence 99999998887 788999999999864 246888886664 799999999999
Q ss_pred ecCCCCCCCCCCCCCC-CCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEe
Q 009897 189 RYSDLPNTPDFPMNKG-PEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMV 267 (523)
Q Consensus 189 ~~s~~p~~p~~p~~~g-~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~ 267 (523)
..+..|..|++| | .+.+.+..+|.. +.+. ..+.+++|+|||+|.+|+|+|..|++.+. +|+++.|.+.+.
T Consensus 129 ~~~~~~~~~~i~---g~~~~~~~~~v~~~-~~~~-~~~~~~~vvVvG~G~~g~e~A~~l~~~g~---~V~lv~~~~~~~- 199 (360)
T 3ab1_A 129 LGAFEPRKLPQL---GNIDHLTGSSVYYA-VKSV-EDFKGKRVVIVGGGDSALDWTVGLIKNAA---SVTLVHRGHEFQ- 199 (360)
T ss_dssp TCSCCBCCCGGG---CCCTTTBTTTEESS-CSCG-GGGTTCEEEEECSSHHHHHHHHHTTTTSS---EEEEECSSSSCS-
T ss_pred CCcCCCCCCCCC---CchhhCcCceEEEe-cCCH-HHcCCCcEEEECCCHHHHHHHHHHHhcCC---EEEEEEcCCCCC-
Confidence 864468888888 7 666766545543 2333 44679999999999999999999998764 499999876421
Q ss_pred cCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeec
Q 009897 268 PDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVL 347 (523)
Q Consensus 268 p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~ 347 (523)
+... .
T Consensus 200 ~~~~---------------------------------------------------------------------------~ 204 (360)
T 3ab1_A 200 GHGK---------------------------------------------------------------------------T 204 (360)
T ss_dssp SCSH---------------------------------------------------------------------------H
T ss_pred CCHH---------------------------------------------------------------------------H
Confidence 1100 0
Q ss_pred CcchhhhccCCCEEEEec-CceEEecC-----cEEEc--CC--ceeeeccEEEEecCCCCCccccccccchhhhhhhcCC
Q 009897 348 PRNFYDRVQGGGLSLMKS-RSFTFCKN-----GLVID--GE--TTPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQITGS 417 (523)
Q Consensus 348 ~~~~~~~~~~g~v~v~~~-~i~~~~~~-----~v~l~--dG--~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~~ 417 (523)
.+.+.+..++.+|+++.+ .+.++..+ +|.+. +| .+ +++|.||+|||++++..+++.++...-+..+..+
T Consensus 205 ~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~-i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd 283 (360)
T 3ab1_A 205 AHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWT-VEADRLLILIGFKSNLGPLARWDLELYENALVVD 283 (360)
T ss_dssp HHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEE-EECSEEEECCCBCCSCGGGGGSSCCEETTEEECC
T ss_pred HHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEE-EeCCEEEECCCCCCCHHHHHhhccccccCeeeec
Confidence 112233445567888887 47777643 47775 77 45 8999999999999987654433222111111111
Q ss_pred CcccccccccCCCCCeEEecccCC----CCchhhHHHHHHHHHHHHcC
Q 009897 418 SAPLYREGIHPQIPQLAILGYADS----PSILRTTEMRSKCLAHFLAG 461 (523)
Q Consensus 418 ~~~ly~~~~~~~~p~l~~iG~~~~----~~~~~~ae~Qa~~~a~~l~g 461 (523)
..+.++.|+||++|.+.. ......+..|++.+|..+.+
T Consensus 284 ------~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 325 (360)
T 3ab1_A 284 ------SHMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLS 325 (360)
T ss_dssp ------TTSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHH
T ss_pred ------CCCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHh
Confidence 123458999999998753 23456777888877776543
No 11
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.98 E-value=9.3e-32 Score=269.19 Aligned_cols=290 Identities=17% Similarity=0.221 Sum_probs=213.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.|...+|...+. .+..+ ...+..++.+|
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~------~~~~~--------~~~~~~~~~~~ 72 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIY------DVAGF--------PKIRAQELINN 72 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEEC------CSTTC--------SSEEHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEe------ccCCC--------CCCCHHHHHHH
Confidence 37999999999999999999999999999999999999998766655432 11111 11356899999
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.++++++++ .++++++|++++... ++.|.|++.++ ++.||+||+|||.
T Consensus 73 ~~~~~~~~~~--~~~~~~~v~~i~~~~---------------------~~~~~v~~~~g--------~~~~d~vVlAtG~ 121 (332)
T 3lzw_A 73 LKEQMAKFDQ--TICLEQAVESVEKQA---------------------DGVFKLVTNEE--------THYSKTVIITAGN 121 (332)
T ss_dssp HHHHHTTSCC--EEECSCCEEEEEECT---------------------TSCEEEEESSE--------EEEEEEEEECCTT
T ss_pred HHHHHHHhCC--cEEccCEEEEEEECC---------------------CCcEEEEECCC--------EEEeCEEEECCCC
Confidence 9999999887 899999999999875 24799988765 5899999999997
Q ss_pred cCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEecC
Q 009897 190 YSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVPD 269 (523)
Q Consensus 190 ~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p~ 269 (523)
.+..|+.|++| |.+.|.+..+|+ .+.+. ..+.+++|+|||+|.+|+|+|..+++.+. +|+++.|.+.. .+.
T Consensus 122 ~~~~p~~~~~~---g~~~~~g~~~~~-~~~~~-~~~~~~~v~vvG~g~~~~e~a~~l~~~~~---~v~~~~~~~~~-~~~ 192 (332)
T 3lzw_A 122 GAFKPRKLELE---NAEQYEGKNLHY-FVDDL-QKFAGRRVAILGGGDSAVDWALMLEPIAK---EVSIIHRRDKF-RAH 192 (332)
T ss_dssp SCCEECCCCCT---TGGGGBTTTEES-SCSCG-GGGBTCEEEEECSSHHHHHHHHHHTTTBS---EEEEECSSSSC-SSC
T ss_pred CcCCCCCCCCC---ChhhccCceEEE-ecCCH-HHcCCCEEEEECCCHhHHHHHHHHHhhCC---eEEEEEecCcC-Ccc
Confidence 43368888888 888888888888 55555 45679999999999999999999998765 49999887652 111
Q ss_pred ccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecCc
Q 009897 270 YFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPR 349 (523)
Q Consensus 270 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~ 349 (523)
.
T Consensus 193 ~------------------------------------------------------------------------------- 193 (332)
T 3lzw_A 193 E------------------------------------------------------------------------------- 193 (332)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred H-------------------------------------------------------------------------------
Confidence 0
Q ss_pred chhhhccCCCEEEEecC-ceEEecCc----EEEcC-----CceeeeccEEEEecCCCCCccccccccchhhhhhhcCCCc
Q 009897 350 NFYDRVQGGGLSLMKSR-SFTFCKNG----LVIDG-----ETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQITGSSA 419 (523)
Q Consensus 350 ~~~~~~~~g~v~v~~~~-i~~~~~~~----v~l~d-----G~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~~~~ 419 (523)
...+.+++.+|+++.+. +.++++++ |++.+ +.+ +++|.||+|||++|+..+++.++...-...+..+
T Consensus 194 ~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~G~~p~~~~~~~~~~~~~~g~i~vd-- 270 (332)
T 3lzw_A 194 HSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEI-LEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVK-- 270 (332)
T ss_dssp HHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEE-EECSEEEECCCEECCCGGGGGSSCCEETTEEECC--
T ss_pred HHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEE-EECCEEEEeeccCCCchHHhhcCccccCCeEEeC--
Confidence 01122344567777654 67776543 77776 345 8999999999999987765433222111111111
Q ss_pred ccccccccCCCCCeEEecccC----CCCchhhHHHHHHHHHHHH
Q 009897 420 PLYREGIHPQIPQLAILGYAD----SPSILRTTEMRSKCLAHFL 459 (523)
Q Consensus 420 ~ly~~~~~~~~p~l~~iG~~~----~~~~~~~ae~Qa~~~a~~l 459 (523)
..+.++.|+||++|.+. .+.....+..|++.+|..+
T Consensus 271 ----~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i 310 (332)
T 3lzw_A 271 ----STMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNA 310 (332)
T ss_dssp ----TTSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHH
T ss_pred ----CCCceecCCEEEccceecCCCCcceEeeehhhHHHHHHHH
Confidence 22345899999999875 3334667777887777654
No 12
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.98 E-value=6.9e-32 Score=270.91 Aligned_cols=295 Identities=19% Similarity=0.220 Sum_probs=209.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.|...+|...+ +.+..+ ......++.+|
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~------~~~~~~--------~~~~~~~~~~~ 70 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYI------YDVAGF--------PKVYAKDLVKG 70 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEE------CCSTTC--------SSEEHHHHHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCcee------eccCCC--------CCCCHHHHHHH
Confidence 4799999999999999999999999999999999999999876554322 111111 11245788899
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.++++++++ .++++++|+.++... +.|.|++.++. ++.||+||+|||.
T Consensus 71 l~~~~~~~~~--~~~~~~~v~~i~~~~----------------------~~~~v~~~~g~-------~~~~~~lv~AtG~ 119 (335)
T 2zbw_A 71 LVEQVAPFNP--VYSLGERAETLEREG----------------------DLFKVTTSQGN-------AYTAKAVIIAAGV 119 (335)
T ss_dssp HHHHHGGGCC--EEEESCCEEEEEEET----------------------TEEEEEETTSC-------EEEEEEEEECCTT
T ss_pred HHHHHHHcCC--EEEeCCEEEEEEECC----------------------CEEEEEECCCC-------EEEeCEEEECCCC
Confidence 9999998887 788999999999864 36888876554 7999999999997
Q ss_pred cCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEecC
Q 009897 190 YSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVPD 269 (523)
Q Consensus 190 ~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p~ 269 (523)
.+..|..|++| |.+.+.+..+|.. +.+. +.+.+++|+|||+|.+|+|+|..|++.+. +|+++.|++.+. +.
T Consensus 120 ~~~~p~~~~i~---g~~~~~~~~~~~~-~~~~-~~~~~~~v~viG~G~~g~e~a~~l~~~g~---~V~~v~~~~~~~-~~ 190 (335)
T 2zbw_A 120 GAFEPRRIGAP---GEREFEGRGVYYA-VKSK-AEFQGKRVLIVGGGDSAVDWALNLLDTAR---RITLIHRRPQFR-AH 190 (335)
T ss_dssp SEEEECCCCCT---TTTTTBTTTEESS-CSCG-GGGTTCEEEEECSSHHHHHHHHHTTTTSS---EEEEECSSSSCC-SC
T ss_pred CCCCCCCCCCC---ChhhccCcEEEEe-cCch-hhcCCCEEEEECCCHHHHHHHHHHHhhCC---EEEEEEcCCccC-cc
Confidence 53257888788 7777766545443 2333 44679999999999999999999998764 499999876521 11
Q ss_pred ccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecCc
Q 009897 270 YFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPR 349 (523)
Q Consensus 270 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~ 349 (523)
.. ..+
T Consensus 191 ~~---------------------------------------------------------------------------~~~ 195 (335)
T 2zbw_A 191 EA---------------------------------------------------------------------------SVK 195 (335)
T ss_dssp HH---------------------------------------------------------------------------HHH
T ss_pred HH---------------------------------------------------------------------------HHH
Confidence 00 001
Q ss_pred chhhhccCCCEEEEecC-ceEEecC----cEEEc---CC--ceeeeccEEEEecCCCCCccccccccchhhhhhhcCCCc
Q 009897 350 NFYDRVQGGGLSLMKSR-SFTFCKN----GLVID---GE--TTPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQITGSSA 419 (523)
Q Consensus 350 ~~~~~~~~g~v~v~~~~-i~~~~~~----~v~l~---dG--~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~~~~ 419 (523)
.+.+.+++.+|+++.+. +.+++++ +|.+. +| ++ +++|.||+|||++++.++++.++...-...+..+
T Consensus 196 ~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd-- 272 (335)
T 2zbw_A 196 ELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELA-LEVDAVLILAGYITKLGPLANWGLALEKNKIKVD-- 272 (335)
T ss_dssp HHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEE-EECSEEEECCCEEEECGGGGGSCCCEETTEEECC--
T ss_pred HHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEE-EecCEEEEeecCCCCchHhhhcceeccCCeeeeC--
Confidence 12234455677887773 7777654 47776 77 45 8999999999999987654432222111111111
Q ss_pred ccccccccCCCCCeEEecccCC----CCchhhHHHHHHHHHHHHc
Q 009897 420 PLYREGIHPQIPQLAILGYADS----PSILRTTEMRSKCLAHFLA 460 (523)
Q Consensus 420 ~ly~~~~~~~~p~l~~iG~~~~----~~~~~~ae~Qa~~~a~~l~ 460 (523)
..+.++.||||++|.+.. ......+..|++.+|..+.
T Consensus 273 ----~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (335)
T 2zbw_A 273 ----TTMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAA 313 (335)
T ss_dssp ----TTCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHH
Confidence 223468999999998753 2345667778887777654
No 13
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.97 E-value=2.9e-31 Score=261.30 Aligned_cols=282 Identities=11% Similarity=0.070 Sum_probs=205.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
|.+||+|||||++|+++|..|++.|++|+|||++...+..+...+ .++ .....+..++.+
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~-----------------~~~---~~~~~~~~~~~~ 60 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSH-----------------GFL---GQDGKAPGEIIA 60 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCC-----------------SST---TCTTCCHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhc-----------------CCc---CCCCCCHHHHHH
Confidence 458999999999999999999999999999999764433221100 011 122456688999
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
|+.+++++++. ...++++|+.+++.. +.|.|++.++. ++.||+||+|||
T Consensus 61 ~~~~~~~~~~~--v~~~~~~v~~i~~~~----------------------~~~~v~~~~g~-------~~~~d~vviAtG 109 (297)
T 3fbs_A 61 EARRQIERYPT--IHWVEGRVTDAKGSF----------------------GEFIVEIDGGR-------RETAGRLILAMG 109 (297)
T ss_dssp HHHHHHTTCTT--EEEEESCEEEEEEET----------------------TEEEEEETTSC-------EEEEEEEEECCC
T ss_pred HHHHHHHhcCC--eEEEEeEEEEEEEcC----------------------CeEEEEECCCC-------EEEcCEEEECCC
Confidence 99999888742 123367999998864 46899887765 799999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEec
Q 009897 189 RYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVP 268 (523)
Q Consensus 189 ~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p 268 (523)
.. |+.|.+| |.+.+.+..+|...+.+. ..+.+++|+|||+|.+|+|+|..|++.+ . |+++.|.+.
T Consensus 110 ~~---~~~~~~~---g~~~~~~~~~~~~~~~~~-~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~---v~~v~~~~~---- 174 (297)
T 3fbs_A 110 VT---DELPEIA---GLRERWGSAVFHCPYCHG-YELDQGKIGVIAASPMAIHHALMLPDWG-E---TTFFTNGIV---- 174 (297)
T ss_dssp CE---EECCCCB---TTGGGBTTTEESCHHHHT-GGGTTCEEEEECCSTTHHHHHHHGGGTS-E---EEEECTTTC----
T ss_pred CC---CCCCCCC---CchhhcCCeeEEcccCcc-hhhcCCEEEEEecCccHHHHHHHhhhcC-c---EEEEECCCC----
Confidence 64 7778888 888777777777665443 3467999999999999999999999875 4 999987653
Q ss_pred CccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecC
Q 009897 269 DYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLP 348 (523)
Q Consensus 269 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~ 348 (523)
. ++
T Consensus 175 ~-----------------------------------------------------------------------------~~ 177 (297)
T 3fbs_A 175 E-----------------------------------------------------------------------------PD 177 (297)
T ss_dssp C-----------------------------------------------------------------------------CC
T ss_pred C-----------------------------------------------------------------------------CC
Confidence 0 11
Q ss_pred cchhhhccCCCEEEEecCceEEecC-cEEEcCCceeeeccEEEEecCCCCCccccccccchhhh---h-hhcCCCccccc
Q 009897 349 RNFYDRVQGGGLSLMKSRSFTFCKN-GLVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQ---K-QITGSSAPLYR 423 (523)
Q Consensus 349 ~~~~~~~~~g~v~v~~~~i~~~~~~-~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~---~-~~~~~~~~ly~ 423 (523)
..+.+.+++.+|+++...+.+++++ .|++.||++ +++|.||+|||++|+.++++.++...-. . .+..+
T Consensus 178 ~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g~~-~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd------ 250 (297)
T 3fbs_A 178 ADQHALLAARGVRVETTRIREIAGHADVVLADGRS-IALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTD------ 250 (297)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEETTEEEEETTSCE-EEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCC------
T ss_pred HHHHHHHHHCCcEEEcceeeeeecCCeEEeCCCCE-EEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeC------
Confidence 1223445556778876568888877 799999998 9999999999999987654432221110 0 11111
Q ss_pred ccccCCCCCeEEecccCC-CCchhhHHHHHHHHHHHHc
Q 009897 424 EGIHPQIPQLAILGYADS-PSILRTTEMRSKCLAHFLA 460 (523)
Q Consensus 424 ~~~~~~~p~l~~iG~~~~-~~~~~~ae~Qa~~~a~~l~ 460 (523)
..+.++.|+||++|.+.. +.....+..|++.+|..+.
T Consensus 251 ~~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~ 288 (297)
T 3fbs_A 251 PMKQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAH 288 (297)
T ss_dssp TTCBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHH
Confidence 224578999999998876 5567888999988887664
No 14
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.97 E-value=1.8e-30 Score=258.60 Aligned_cols=287 Identities=15% Similarity=0.187 Sum_probs=208.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHH
Q 009897 27 PKMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKV 106 (523)
Q Consensus 27 ~~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (523)
++|.+||+|||||++|+++|..|++.|++|+|||++ +||.|.... ..+.++. .......++
T Consensus 12 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~---------~~~~~~~--------~~~~~~~~~ 72 (323)
T 3f8d_A 12 PGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAG---------IVDDYLG--------LIEIQASDM 72 (323)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCC---------EECCSTT--------STTEEHHHH
T ss_pred CCCccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccc---------cccccCC--------CCCCCHHHH
Confidence 345689999999999999999999999999999997 999998610 0001111 112456889
Q ss_pred HHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEe
Q 009897 107 MEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILC 186 (523)
Q Consensus 107 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlA 186 (523)
.+|+.++++++++ .+++ ++|++++... +.|.|.+.++. ++.||+||+|
T Consensus 73 ~~~~~~~~~~~~v--~~~~-~~v~~i~~~~----------------------~~~~v~~~~g~-------~~~~d~lvlA 120 (323)
T 3f8d_A 73 IKVFNKHIEKYEV--PVLL-DIVEKIENRG----------------------DEFVVKTKRKG-------EFKADSVILG 120 (323)
T ss_dssp HHHHHHHHHTTTC--CEEE-SCEEEEEEC------------------------CEEEEESSSC-------EEEEEEEEEC
T ss_pred HHHHHHHHHHcCC--EEEE-EEEEEEEecC----------------------CEEEEEECCCC-------EEEcCEEEEC
Confidence 9999999999998 7888 8999998864 56888887765 8999999999
Q ss_pred eeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeE
Q 009897 187 IGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWM 266 (523)
Q Consensus 187 tG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~ 266 (523)
||.. |+.|++| |.+.|.+..+|...+.+. ..+.+++|+|||+|.+|+|+|..|++.+.. |+++.|.+.+.
T Consensus 121 tG~~---~~~~~i~---g~~~~~~~~~~~~~~~~~-~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~---v~~~~~~~~~~ 190 (323)
T 3f8d_A 121 IGVK---RRKLGVP---GEQEFAGRGISYCSVADA-PLFKNRVVAVIGGGDSALEGAEILSSYSTK---VYLIHRRDTFK 190 (323)
T ss_dssp CCCE---ECCCCCT---TTTTTBTTTEESCHHHHG-GGGTTCEEEEECCSHHHHHHHHHHHHHSSE---EEEECSSSSCC
T ss_pred cCCC---CccCCCC---chhhhcCCceEEeccCCH-hHcCCCEEEEECCCHHHHHHHHHHHHhCCe---EEEEEeCCCCC
Confidence 9965 7888888 888787777776654443 456799999999999999999999998754 99998876421
Q ss_pred ecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceee
Q 009897 267 VPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTV 346 (523)
Q Consensus 267 ~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~ 346 (523)
+.
T Consensus 191 -~~----------------------------------------------------------------------------- 192 (323)
T 3f8d_A 191 -AQ----------------------------------------------------------------------------- 192 (323)
T ss_dssp -SC-----------------------------------------------------------------------------
T ss_pred -cC-----------------------------------------------------------------------------
Confidence 10
Q ss_pred cCcchhhhc-cCCCEEEEecC-ceEEecC----cEEEcC---Cc--eeeeccEEEEecCCCCCccccccccchhhhhhhc
Q 009897 347 LPRNFYDRV-QGGGLSLMKSR-SFTFCKN----GLVIDG---ET--TPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQIT 415 (523)
Q Consensus 347 ~~~~~~~~~-~~g~v~v~~~~-i~~~~~~----~v~l~d---G~--~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~ 415 (523)
..+.+.+ +..+|+++.+. +.++.++ +|++.+ |+ + +++|.||+|||++++.++++.++... ..
T Consensus 193 --~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~G~~p~~~~~~~~g~~~-~~--- 265 (323)
T 3f8d_A 193 --PIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKE-LNVNGVFIEIGFDPPTDFAKSNGIET-DT--- 265 (323)
T ss_dssp --HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEE-EECSEEEECCCEECCHHHHHHTTCCB-CT---
T ss_pred --HHHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEE-EEcCEEEEEECCCCChhHHhhcCeee-cC---
Confidence 0111222 33478888775 7777765 377776 76 5 89999999999999976544332211 10
Q ss_pred CCCcccccccccCCCCCeEEecccCC----CCchhhHHHHHHHHHHHHc
Q 009897 416 GSSAPLYREGIHPQIPQLAILGYADS----PSILRTTEMRSKCLAHFLA 460 (523)
Q Consensus 416 ~~~~~ly~~~~~~~~p~l~~iG~~~~----~~~~~~ae~Qa~~~a~~l~ 460 (523)
.........+.++.||||++|.+.. ......+..|++.+|..+.
T Consensus 266 -~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (323)
T 3f8d_A 266 -NGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAY 313 (323)
T ss_dssp -TSSBCCCTTCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred -CCcEecCCCceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHH
Confidence 0001111234468999999998876 3456788888888777653
No 15
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.97 E-value=2e-29 Score=251.99 Aligned_cols=289 Identities=19% Similarity=0.198 Sum_probs=203.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.+||+|||||++|+++|..|++.|++|+|||+. .+||.|..... ...++.+ ....+..++.++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~---------~~~~~~~-------~~~~~~~~~~~~ 70 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEE---------VENFPGF-------PEPIAGMELAQR 70 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSC---------BCCSTTC-------SSCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccc---------cccCCCC-------CCCCCHHHHHHH
Confidence 489999999999999999999999999999998 78998875211 0011111 112456889999
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeC--CCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRL--VPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCI 187 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAt 187 (523)
+.++++++++ .+++ .+|.+++.. . +..|.|.+.++. ++.||+||+||
T Consensus 71 l~~~~~~~gv--~~~~-~~v~~i~~~~~~---------------------~~~~~v~~~~g~-------~~~~~~vv~At 119 (325)
T 2q7v_A 71 MHQQAEKFGA--KVEM-DEVQGVQHDATS---------------------HPYPFTVRGYNG-------EYRAKAVILAT 119 (325)
T ss_dssp HHHHHHHTTC--EEEE-CCEEEEEECTTS---------------------SSCCEEEEESSC-------EEEEEEEEECC
T ss_pred HHHHHHHcCC--EEEe-eeEEEEEeccCC---------------------CceEEEEECCCC-------EEEeCEEEECc
Confidence 9999999988 6766 689999875 2 123888777664 89999999999
Q ss_pred eecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEe
Q 009897 188 GRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMV 267 (523)
Q Consensus 188 G~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~ 267 (523)
|.. |..|++| |.+.+.+..+|...+.+. ....+++|+|||+|.+|+|+|..|++.+. +||++.|.+.+.
T Consensus 120 G~~---~~~~~i~---g~~~~~~~~~~~~~~~~~-~~~~~~~v~VvG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~~- 188 (325)
T 2q7v_A 120 GAD---PRKLGIP---GEDNFWGKGVSTCATCDG-FFYKGKKVVVIGGGDAAVEEGMFLTKFAD---EVTVIHRRDTLR- 188 (325)
T ss_dssp CEE---ECCCCCT---TTTTTBTTTEESCHHHHG-GGGTTCEEEEECCSHHHHHHHHHHTTTCS---EEEEECSSSSCC-
T ss_pred CCC---cCCCCCC---ChhhccCceEEEeccCCH-HHcCCCEEEEECCCHHHHHHHHHHHhcCC---EEEEEeCCCcCC-
Confidence 965 6777788 877776666776544332 34578999999999999999999998765 499999876421
Q ss_pred cCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeec
Q 009897 268 PDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVL 347 (523)
Q Consensus 268 p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~ 347 (523)
+.
T Consensus 189 ~~------------------------------------------------------------------------------ 190 (325)
T 2q7v_A 189 AN------------------------------------------------------------------------------ 190 (325)
T ss_dssp SC------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred Ccchhhhc-cCCCEEEEecC-ceEEecC----cEEEc---CCc-eeeeccEEEEecCCCCCccccccccchhhhhhhcCC
Q 009897 348 PRNFYDRV-QGGGLSLMKSR-SFTFCKN----GLVID---GET-TPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQITGS 417 (523)
Q Consensus 348 ~~~~~~~~-~~g~v~v~~~~-i~~~~~~----~v~l~---dG~-~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~~ 417 (523)
..+.+.+ +..+|+++.+. +.++.++ +|++. +|+ ..+++|.||+|||++|+..+++.+ .. ++. .
T Consensus 191 -~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-~~-~~~----~ 263 (325)
T 2q7v_A 191 -KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VS-LRD----D 263 (325)
T ss_dssp -HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SC-BCT----T
T ss_pred -hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh-cc-cCC----C
Confidence 0111122 23467887764 6777654 47776 675 238999999999999997654322 11 110 0
Q ss_pred CcccccccccCCCCCeEEecccCCC--CchhhHHHHHHHHHHHHcCC
Q 009897 418 SAPLYREGIHPQIPQLAILGYADSP--SILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 418 ~~~ly~~~~~~~~p~l~~iG~~~~~--~~~~~ae~Qa~~~a~~l~g~ 462 (523)
........+.++.||||++|.+... .....+..|++.+|..+...
T Consensus 264 g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 310 (325)
T 2q7v_A 264 GYVDVRDEIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQ 310 (325)
T ss_dssp SCBCCBTTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccEecCCCCccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHH
Confidence 0011112244689999999988753 45678889998888776543
No 16
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.97 E-value=3.8e-30 Score=258.15 Aligned_cols=292 Identities=19% Similarity=0.218 Sum_probs=205.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEcc----CCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCCh
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEA----RSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDH 103 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~----~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (523)
.+.+||+|||||++||++|..|++.|++|+|||+ +..+||.|..... +..+|- ...+...
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~------------~~~~~~----~~~~~~~ 83 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTE------------IENFPG----FPDGLTG 83 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSE------------ECCSTT----CTTCEEH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchh------------hcccCC----CcccCCH
Confidence 3568999999999999999999999999999999 4579999886321 111110 1223467
Q ss_pred hHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEE
Q 009897 104 NKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFV 183 (523)
Q Consensus 104 ~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~v 183 (523)
.++.+|+.++++++++ .+++++ |++++... +.|.+++.... + ..++.||+|
T Consensus 84 ~~~~~~~~~~~~~~gv--~i~~~~-v~~i~~~~----------------------~~~~v~~~~~~--~--~~~~~~d~v 134 (338)
T 3itj_A 84 SELMDRMREQSTKFGT--EIITET-VSKVDLSS----------------------KPFKLWTEFNE--D--AEPVTTDAI 134 (338)
T ss_dssp HHHHHHHHHHHHHTTC--EEECSC-EEEEECSS----------------------SSEEEEETTCS--S--SCCEEEEEE
T ss_pred HHHHHHHHHHHHHcCC--EEEEeE-EEEEEEcC----------------------CEEEEEEEecC--C--CcEEEeCEE
Confidence 8999999999999998 788887 99998764 56888774221 1 127899999
Q ss_pred EEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchh-hhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEee
Q 009897 184 ILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAA-ELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKT 262 (523)
Q Consensus 184 VlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~-~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~ 262 (523)
|+|||.. |+.|.+| |.+.|.+..+|.....+.. ..+.+++|+|||+|.+|+|+|..|++.+. +|+++.|.
T Consensus 135 vlAtG~~---~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~---~v~~v~~~ 205 (338)
T 3itj_A 135 ILATGAS---AKRMHLP---GEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGS---KVFMLVRK 205 (338)
T ss_dssp EECCCEE---ECCCCCT---THHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSS---EEEEECSS
T ss_pred EECcCCC---cCCCCCC---CchhccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCC---EEEEEEcC
Confidence 9999975 6777788 7776666666665432221 14578999999999999999999998865 49999887
Q ss_pred ceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCc
Q 009897 263 VHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSC 342 (523)
Q Consensus 263 ~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 342 (523)
+.+. +
T Consensus 206 ~~~~-~-------------------------------------------------------------------------- 210 (338)
T 3itj_A 206 DHLR-A-------------------------------------------------------------------------- 210 (338)
T ss_dssp SSCC-S--------------------------------------------------------------------------
T ss_pred CccC-C--------------------------------------------------------------------------
Confidence 6521 1
Q ss_pred ceeecCcchhhhcc-CCCEEEEecC-ceEEecCc-----EEEcC-----CceeeeccEEEEecCCCCCccccccccchhh
Q 009897 343 MFTVLPRNFYDRVQ-GGGLSLMKSR-SFTFCKNG-----LVIDG-----ETTPLVTDIVIFATGYKSDEKLKNIFKSTYF 410 (523)
Q Consensus 343 ~~~~~~~~~~~~~~-~g~v~v~~~~-i~~~~~~~-----v~l~d-----G~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l 410 (523)
...+.+.+. ..+|+++.+. +.+++.++ |++.+ +++ +++|.||+|||++++..+++. +...-
T Consensus 211 -----~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p~~~~~~~-~l~~~ 283 (338)
T 3itj_A 211 -----STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETD-LPVSGLFYAIGHTPATKIVAG-QVDTD 283 (338)
T ss_dssp -----CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEE-EECSEEEECSCEEECCGGGBT-TBCBC
T ss_pred -----CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEE-EEeCEEEEEeCCCCChhHhhC-ceEec
Confidence 011122332 3478888764 77776543 77776 355 899999999999998766542 11100
Q ss_pred -hhhhcCCCcccccccccCCCCCeEEecccCC--CCchhhHHHHHHHHHHHHc
Q 009897 411 -QKQITGSSAPLYREGIHPQIPQLAILGYADS--PSILRTTEMRSKCLAHFLA 460 (523)
Q Consensus 411 -~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~--~~~~~~ae~Qa~~~a~~l~ 460 (523)
+..+ ......+.++.|+||++|.+.. +..+..+..|++.+|..+.
T Consensus 284 ~~G~i-----~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 331 (338)
T 3itj_A 284 EAGYI-----KTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAE 331 (338)
T ss_dssp TTSCB-----CCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCcE-----EEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHH
Confidence 1111 1112344568999999998874 3456778888887777653
No 17
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.97 E-value=2.4e-29 Score=249.71 Aligned_cols=284 Identities=17% Similarity=0.209 Sum_probs=201.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-ceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGF-KPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
+||+|||||++|+++|..|++.|+ +|+|||+. .+||.|..... ...++.+ .......++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~---------~~~~~~~-------~~~~~~~~~~~~ 64 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSE---------IENYPGV-------KEVVSGLDFMQP 64 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSC---------BCCSTTC-------CSCBCHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccc---------cccCCCC-------cccCCHHHHHHH
Confidence 689999999999999999999999 99999994 78998875210 0011111 123467889999
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.++++++++ .+++ ++|.+++... +.|.|++.++. ++.||+||+|||.
T Consensus 65 l~~~~~~~~v--~~~~-~~v~~i~~~~----------------------~~~~v~~~~g~-------~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 65 WQEQCFRFGL--KHEM-TAVQRVSKKD----------------------SHFVILAEDGK-------TFEAKSVIIATGG 112 (311)
T ss_dssp HHHHHHTTSC--EEEC-SCEEEEEEET----------------------TEEEEEETTSC-------EEEEEEEEECCCE
T ss_pred HHHHHHHcCC--EEEE-EEEEEEEEcC----------------------CEEEEEEcCCC-------EEECCEEEECCCC
Confidence 9999998887 6777 7899998764 45888776554 7999999999996
Q ss_pred cCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEecC
Q 009897 190 YSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVPD 269 (523)
Q Consensus 190 ~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p~ 269 (523)
. |+.|++| |.+.|.+..+|+....+. ....+++|+|||+|.+|+|+|..|++.+. +||++.|++.+. .
T Consensus 113 ~---~~~~~~~---g~~~~~~~~~~~~~~~~~-~~~~~~~v~VvG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~~--~ 180 (311)
T 2q0l_A 113 S---PKRTGIK---GESEYWGKGVSTCATCDG-FFYKNKEVAVLGGGDTAVEEAIYLANICK---KVYLIHRRDGFR--C 180 (311)
T ss_dssp E---ECCCCCB---THHHHBTTTEESCHHHHG-GGGTTSEEEEECCSHHHHHHHHHHHTTSS---EEEEECSSSSCC--S
T ss_pred C---CCCCCCC---ChhhccCCcEEEeecCCh-hhcCCCEEEEECCCHHHHHHHHHHHhcCC---EEEEEeeCCccC--C
Confidence 5 6777788 776666666666544333 34568999999999999999999998865 499998876521 0
Q ss_pred ccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecCc
Q 009897 270 YFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPR 349 (523)
Q Consensus 270 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~ 349 (523)
. .
T Consensus 181 ~------------------------------------------------------------------------------~ 182 (311)
T 2q0l_A 181 A------------------------------------------------------------------------------P 182 (311)
T ss_dssp C------------------------------------------------------------------------------H
T ss_pred C------------------------------------------------------------------------------H
Confidence 0 0
Q ss_pred chhhhc-cCCCEEEEecC-ceEEecC-----cEEEc---CCce-eeeccEEEEecCCCCCcccccccc----chhhh--h
Q 009897 350 NFYDRV-QGGGLSLMKSR-SFTFCKN-----GLVID---GETT-PLVTDIVIFATGYKSDEKLKNIFK----STYFQ--K 412 (523)
Q Consensus 350 ~~~~~~-~~g~v~v~~~~-i~~~~~~-----~v~l~---dG~~-~~~~D~VI~ATG~~~~~~l~~~~~----~~~l~--~ 412 (523)
.+.+.+ ++.+|+++.+. +.++.++ +|++. +|++ .+++|.||+|||++|+.++++..+ .. ++ .
T Consensus 183 ~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~-~~~~g 261 (311)
T 2q0l_A 183 ITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCK-CDEYG 261 (311)
T ss_dssp HHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSC-BCTTS
T ss_pred HHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeE-eccCC
Confidence 111222 23567777764 6666543 46776 6761 389999999999999976654321 11 11 1
Q ss_pred hhcCCCcccccccccCCCCCeEEecccCC--CCchhhHHHHHHHHHHHHc
Q 009897 413 QITGSSAPLYREGIHPQIPQLAILGYADS--PSILRTTEMRSKCLAHFLA 460 (523)
Q Consensus 413 ~~~~~~~~ly~~~~~~~~p~l~~iG~~~~--~~~~~~ae~Qa~~~a~~l~ 460 (523)
.+.. . ..+.++.||||++|.+.. +.....+..|++.+|..+.
T Consensus 262 ~i~v---d---~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 305 (311)
T 2q0l_A 262 SIVV---D---FSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVI 305 (311)
T ss_dssp CBCC---C---TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CEEe---C---CccccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHH
Confidence 1111 1 224468999999998876 3456788999998887664
No 18
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.97 E-value=3e-29 Score=251.85 Aligned_cols=287 Identities=17% Similarity=0.211 Sum_probs=200.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHH
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVM 107 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (523)
++.+||+|||||++|+++|..|++.|++|+|||+. .+||.|..... ...++.+ .......++.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~---------~~~~~~~-------~~~~~~~~~~ 74 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD---------VENYPGF-------RNGITGPELM 74 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC---------BCCSTTC-------TTCBCHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch---------hhhcCCC-------CCCCCHHHHH
Confidence 45589999999999999999999999999999974 78988865211 0011111 1123567899
Q ss_pred HHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEE-EEeecccCCcceeEEEeCEEEEe
Q 009897 108 EYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNV-TVQEARNVSSATEAYQVDFVILC 186 (523)
Q Consensus 108 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~d~vVlA 186 (523)
+|+.++++++++ .+++++ |.+++. . +.|.| .+.++. ++.||+||+|
T Consensus 75 ~~l~~~~~~~~v--~~~~~~-v~~i~~-~----------------------~~~~v~~~~~g~-------~~~~d~lviA 121 (335)
T 2a87_A 75 DEMREQALRFGA--DLRMED-VESVSL-H----------------------GPLKSVVTADGQ-------THRARAVILA 121 (335)
T ss_dssp HHHHHHHHHTTC--EEECCC-EEEEEC-S----------------------SSSEEEEETTSC-------EEEEEEEEEC
T ss_pred HHHHHHHHHcCC--EEEEee-EEEEEe-C----------------------CcEEEEEeCCCC-------EEEeCEEEEC
Confidence 999999999988 788876 888876 3 35888 665554 7999999999
Q ss_pred eeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeE
Q 009897 187 IGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWM 266 (523)
Q Consensus 187 tG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~ 266 (523)
||.. |..|++| |.+.|.+..+|+....+. ....+++|+|||+|.+|+|+|..|++.+. +||++.|++.+.
T Consensus 122 tG~~---~~~~~i~---g~~~~~~~~~~~~~~~~~-~~~~~~~v~ViG~G~~g~e~a~~l~~~g~---~V~l~~~~~~~~ 191 (335)
T 2a87_A 122 MGAA---ARYLQVP---GEQELLGRGVSSCATCDG-FFFRDQDIAVIGGGDSAMEEATFLTRFAR---SVTLVHRRDEFR 191 (335)
T ss_dssp CCEE---ECCCCCT---HHHHTBTTTEESCHHHHG-GGGTTCEEEEECSSHHHHHHHHHHTTTCS---EEEEECSSSSCS
T ss_pred CCCC---ccCCCCC---chHhccCCceEEeeccch-hhcCCCEEEEECCCHHHHHHHHHHHHhCC---eEEEEEcCCcCC
Confidence 9975 6777777 766666666776543332 23578999999999999999999998765 499998876421
Q ss_pred ecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceee
Q 009897 267 VPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTV 346 (523)
Q Consensus 267 ~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~ 346 (523)
.
T Consensus 192 ~------------------------------------------------------------------------------- 192 (335)
T 2a87_A 192 A------------------------------------------------------------------------------- 192 (335)
T ss_dssp S-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cCcchh-hhccCCCEEEEecC-ceEEecCc----EEEc---CCc-eeeeccEEEEecCCCCCccccccccchhh-hhhhc
Q 009897 347 LPRNFY-DRVQGGGLSLMKSR-SFTFCKNG----LVID---GET-TPLVTDIVIFATGYKSDEKLKNIFKSTYF-QKQIT 415 (523)
Q Consensus 347 ~~~~~~-~~~~~g~v~v~~~~-i~~~~~~~----v~l~---dG~-~~~~~D~VI~ATG~~~~~~l~~~~~~~~l-~~~~~ 415 (523)
++.+. +.+++.+|+++.+. +.++++++ |++. +|+ +.+++|.||+|||++|+..+++. ....- +..+.
T Consensus 193 -~~~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l~~~~~G~i~ 270 (335)
T 2a87_A 193 -SKIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVRE-AIDVDPDGYVL 270 (335)
T ss_dssp -CTTHHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTBT-TBCBCTTSCBC
T ss_pred -cHHHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhhc-ccccCCCccEE
Confidence 00111 12345678887764 77776554 7776 453 23899999999999999765431 11100 11111
Q ss_pred CCCcccccccccCCCCCeEEecccCCC--CchhhHHHHHHHHHHHHc
Q 009897 416 GSSAPLYREGIHPQIPQLAILGYADSP--SILRTTEMRSKCLAHFLA 460 (523)
Q Consensus 416 ~~~~~ly~~~~~~~~p~l~~iG~~~~~--~~~~~ae~Qa~~~a~~l~ 460 (523)
.....+.++.|+||++|.+... .....+..|++.+|..+.
T Consensus 271 -----vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 271 -----VQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp -----CSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred -----eCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHH
Confidence 1112345789999999988754 345677888887776653
No 19
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.96 E-value=5.6e-29 Score=247.09 Aligned_cols=287 Identities=18% Similarity=0.213 Sum_probs=205.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEE-EccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIV-FEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v-~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
.+||+|||||++||++|..|++.|++|+| +|+ +.+||.|...+. +..+|. .....+..++..
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~------------~~~~~~----~~~~~~~~~~~~ 66 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE------------IENYPG----VAQVMDGISFMA 66 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC------------BCCSTT----CCSCBCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece------------eccCCC----CCCCCCHHHHHH
Confidence 47999999999999999999999999999 999 778999876321 001110 122346789999
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
|+.++++++++ .++++ +|.++ .+. ..+.|.|++.... ++.||+||+|||
T Consensus 67 ~~~~~~~~~~v--~~~~~-~v~~i-~~~--------------------~~~~~~v~~~~~~-------~~~~d~lvlAtG 115 (315)
T 3r9u_A 67 PWSEQCMRFGL--KHEMV-GVEQI-LKN--------------------SDGSFTIKLEGGK-------TELAKAVIVCTG 115 (315)
T ss_dssp HHHHHHTTTCC--EEECC-CEEEE-EEC--------------------TTSCEEEEETTSC-------EEEEEEEEECCC
T ss_pred HHHHHHHHcCc--EEEEE-EEEEE-ecC--------------------CCCcEEEEEecCC-------EEEeCEEEEeeC
Confidence 99999999998 78787 88888 542 0146886444332 789999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEec
Q 009897 189 RYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVP 268 (523)
Q Consensus 189 ~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p 268 (523)
.. |+.|.+| |.+.+.+..+|+..+... ..+.+++|+|||+|.+|+|+|..+++.+. +|+++.|.+.+ +
T Consensus 116 ~~---~~~~~~~---g~~~~~~~~~~~~~~~~~-~~~~~~~v~viG~g~~~~e~a~~l~~~g~---~v~~~~~~~~~--~ 183 (315)
T 3r9u_A 116 SA---PKKAGFK---GEDEFFGKGVSTCATCDG-FFYKNKEVAVLGGGDTALEEALYLANICS---KIYLIHRRDEF--R 183 (315)
T ss_dssp EE---ECCCCCB---TTTTTBTTTEESCHHHHG-GGGTTSEEEEECCBHHHHHHHHHHHTTSS---EEEEECSSSSC--B
T ss_pred CC---CCCCCCC---ChhhcCCCeEEeeecccc-cccCcCEEEEECCCHHHHHHHHHHHhhCC---EEEEEEeCCCC--C
Confidence 64 7888888 888887788887765443 44679999999999999999999999865 49999887652 1
Q ss_pred CccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecC
Q 009897 269 DYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLP 348 (523)
Q Consensus 269 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~ 348 (523)
.. . .
T Consensus 184 ~~------------------------------------~----~------------------------------------ 187 (315)
T 3r9u_A 184 AA------------------------------------P----S------------------------------------ 187 (315)
T ss_dssp SC------------------------------------H----H------------------------------------
T ss_pred CC------------------------------------H----H------------------------------------
Confidence 10 0 0
Q ss_pred cchhhhccCCCEEEEecC-ceEEecCc-----EEEc--CCc--eeeeccEEEEecCCCCCcccccc---cc-chhhh-hh
Q 009897 349 RNFYDRVQGGGLSLMKSR-SFTFCKNG-----LVID--GET--TPLVTDIVIFATGYKSDEKLKNI---FK-STYFQ-KQ 413 (523)
Q Consensus 349 ~~~~~~~~~g~v~v~~~~-i~~~~~~~-----v~l~--dG~--~~~~~D~VI~ATG~~~~~~l~~~---~~-~~~l~-~~ 413 (523)
.+.+.+++.+|+++.+. +.++..++ |++. +|+ + +++|.||+|||++|+..+.+. ++ ...-. ..
T Consensus 188 -~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~-~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~ 265 (315)
T 3r9u_A 188 -TVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRD-LNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQ 265 (315)
T ss_dssp -HHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEE-ECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSC
T ss_pred -HHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEE-eecCeEEEEEcCCCCchhhhcccccceeeecCCCc
Confidence 00112245667887664 67776543 7776 786 5 899999999999999876553 11 11000 11
Q ss_pred hcCCCcccccccccCCCCCeEEecccC--CCCchhhHHHHHHHHHHHHc
Q 009897 414 ITGSSAPLYREGIHPQIPQLAILGYAD--SPSILRTTEMRSKCLAHFLA 460 (523)
Q Consensus 414 ~~~~~~~ly~~~~~~~~p~l~~iG~~~--~~~~~~~ae~Qa~~~a~~l~ 460 (523)
+.. ...+.++.|+||++|.+. .+.....+..|++.+|..+.
T Consensus 266 i~v------d~~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~ 308 (315)
T 3r9u_A 266 VSV------DLKMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAM 308 (315)
T ss_dssp BCC------CTTCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred EEe------CCCcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHH
Confidence 111 123446899999999986 34456788888888877654
No 20
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.96 E-value=3.5e-29 Score=249.47 Aligned_cols=293 Identities=18% Similarity=0.231 Sum_probs=200.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHH
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVM 107 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (523)
|+.+||+|||||++|+++|..|++.|++|+|||+ ..+||.|..... ...++.+ .......++.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~---------~~~~~~~-------~~~~~~~~~~ 65 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQLTTTTE---------VENWPGD-------PNDLTGPLLM 65 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECC-SSTTGGGGGCSB---------CCCSTTC-------CSSCBHHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEcc-CCCCceEecchh---------hhhCCCC-------CCCCCHHHHH
Confidence 4458999999999999999999999999999997 478888764210 0011111 1123567889
Q ss_pred HHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEee
Q 009897 108 EYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCI 187 (523)
Q Consensus 108 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAt 187 (523)
+++.++++++++ .+++++ |..++... +.|.| +.++. ++.||+||+||
T Consensus 66 ~~~~~~~~~~~~--~~~~~~-v~~i~~~~----------------------~~~~v-~~~~~-------~~~~~~lv~At 112 (320)
T 1trb_A 66 ERMHEHATKFET--EIIFDH-INKVDLQN----------------------RPFRL-NGDNG-------EYTCDALIIAT 112 (320)
T ss_dssp HHHHHHHHHTTC--EEECCC-EEEEECSS----------------------SSEEE-EESSC-------EEEEEEEEECC
T ss_pred HHHHHHHHHCCC--EEEEee-eeEEEecC----------------------CEEEE-EeCCC-------EEEcCEEEECC
Confidence 999999999988 788875 88888754 56887 55554 79999999999
Q ss_pred eecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEe
Q 009897 188 GRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMV 267 (523)
Q Consensus 188 G~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~ 267 (523)
|.. |..|++| |.+.|.+..+|+....+. ....+++|+|||+|.+|+|+|..|++.+. +||++.|.+.+.
T Consensus 113 G~~---~~~~~~~---g~~~~~~~~~~~~~~~~~-~~~~~~~v~ViG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~~- 181 (320)
T 1trb_A 113 GAS---ARYLGLP---SEEAFKGRGVSACATSDG-FFYRNQKVAVIGGGNTAVEEALYLSNIAS---EVHLIHRRDGFR- 181 (320)
T ss_dssp CEE---ECCCCCH---HHHHTBTTTEESCHHHHG-GGGTTSEEEEECSSHHHHHHHHHHTTTSS---EEEEECSSSSCC-
T ss_pred CCC---cCCCCCC---ChHHhCCceeEecccCCc-cccCCCeEEEECCCHHHHHHHHHHHhcCC---eEEEEEeCCccc-
Confidence 975 6777777 766665566666544332 33578999999999999999999998865 499999876521
Q ss_pred cCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeec
Q 009897 268 PDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVL 347 (523)
Q Consensus 268 p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~ 347 (523)
+.. .+
T Consensus 182 ~~~---------------------------------------------------------------------------~~ 186 (320)
T 1trb_A 182 AEK---------------------------------------------------------------------------IL 186 (320)
T ss_dssp CCH---------------------------------------------------------------------------HH
T ss_pred cCH---------------------------------------------------------------------------HH
Confidence 100 00
Q ss_pred CcchhhhccCCCEEEEecC-ceEEecCc-----EEEcC----Cc-eeeeccEEEEecCCCCCccccccccchhhhhhhcC
Q 009897 348 PRNFYDRVQGGGLSLMKSR-SFTFCKNG-----LVIDG----ET-TPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQITG 416 (523)
Q Consensus 348 ~~~~~~~~~~g~v~v~~~~-i~~~~~~~-----v~l~d----G~-~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~ 416 (523)
.+.+.+.+++.+|+++.+. +.++..++ |++.+ |+ +.+++|.||+|||++|+..+++. ....-+..+..
T Consensus 187 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~~-~l~~~~G~i~v 265 (320)
T 1trb_A 187 IKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEG-QLELENGYIKV 265 (320)
T ss_dssp HHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGTT-TSCEETTEECC
T ss_pred HHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhcc-cccccCceEEE
Confidence 1112234556678888775 77776543 77765 52 23899999999999999765441 11100111111
Q ss_pred CCccccc-ccccCCCCCeEEecccCCC--CchhhHHHHHHHHHHHH
Q 009897 417 SSAPLYR-EGIHPQIPQLAILGYADSP--SILRTTEMRSKCLAHFL 459 (523)
Q Consensus 417 ~~~~ly~-~~~~~~~p~l~~iG~~~~~--~~~~~ae~Qa~~~a~~l 459 (523)
+ ..++ ....++.|+||++|.+... .....+..|++.+|..+
T Consensus 266 d--~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 309 (320)
T 1trb_A 266 Q--SGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDA 309 (320)
T ss_dssp C--CSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHH
T ss_pred C--CCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHH
Confidence 1 1110 1235789999999988654 24566777777766654
No 21
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.96 E-value=9.1e-29 Score=245.36 Aligned_cols=285 Identities=14% Similarity=0.161 Sum_probs=199.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEYL 110 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 110 (523)
+||+|||||++|+++|..|++.|++|+|+|+ .+||.|..... +..++ ...+....++.+|+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~~------------~~~~~-----~~~~~~~~~~~~~~ 62 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTVD------------IENYI-----SVPKTEGQKLAGAL 62 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCCE------------ECCBT-----TBSSEEHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceeccccc------------ccccc-----CcCCCCHHHHHHHH
Confidence 6899999999999999999999999999986 47999875211 11110 11234567899999
Q ss_pred HHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeeec
Q 009897 111 QAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRY 190 (523)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~ 190 (523)
+++++++++ .++++++|+.+++.. + ..+.|.|++.++. ++.||+||+|||..
T Consensus 63 ~~~~~~~~v--~~~~~~~v~~i~~~~--~-----------------~~~~~~v~~~~g~-------~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 63 KVHVDEYDV--DVIDSQSASKLIPAA--V-----------------EGGLHQIETASGA-------VLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHTSCE--EEECSCCEEEEECCS--S-----------------TTCCEEEEETTSC-------EEEEEEEEECCCEE
T ss_pred HHHHHHcCC--eEEccCEEEEEEecc--c-----------------CCceEEEEECCCC-------EEEeCEEEECcCCC
Confidence 999999888 788999999998753 0 0246889887664 79999999999975
Q ss_pred CCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEecCc
Q 009897 191 SDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVPDY 270 (523)
Q Consensus 191 s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p~~ 270 (523)
|..|++| |.+.|.+..+|....... ..+.+++|+|||+|.+|+|+|..|+..+. +||++.|.+.+. .
T Consensus 115 ---~~~~~~~---g~~~~~~~~~~~~~~~~~-~~~~~~~v~VvG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~~---~ 181 (310)
T 1fl2_A 115 ---WRNMNVP---GEDQYRTKGVTYCPHCDG-PLFKGKRVAVIGGGNSGVEAAIDLAGIVE---HVTLLEFAPEMK---A 181 (310)
T ss_dssp ---ECCCCCT---TTTTTBTTTEESCHHHHG-GGGBTCEEEEECCSHHHHHHHHHHHTTBS---EEEEECSSSSCC---S
T ss_pred ---cCCCCCC---ChhhcccceeEEeccCcH-hhcCCCEEEEECCCHHHHHHHHHHHHhCC---EEEEEEeCcccC---c
Confidence 5677778 777776666665543222 34578999999999999999999998765 499999876521 0
Q ss_pred cCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecCcc
Q 009897 271 FLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPRN 350 (523)
Q Consensus 271 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~ 350 (523)
. ..
T Consensus 182 ~-----------------------------------------------------------------------------~~ 184 (310)
T 1fl2_A 182 D-----------------------------------------------------------------------------QV 184 (310)
T ss_dssp C-----------------------------------------------------------------------------HH
T ss_pred c-----------------------------------------------------------------------------HH
Confidence 0 01
Q ss_pred hhhhccC-CCEEEEecC-ceEEecC-----cEEEcC---Cc-eeeeccEEEEecCCCCCccccccccchhhh--hhhcCC
Q 009897 351 FYDRVQG-GGLSLMKSR-SFTFCKN-----GLVIDG---ET-TPLVTDIVIFATGYKSDEKLKNIFKSTYFQ--KQITGS 417 (523)
Q Consensus 351 ~~~~~~~-g~v~v~~~~-i~~~~~~-----~v~l~d---G~-~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~--~~~~~~ 417 (523)
+.+.+++ .+|+++.+. +.++.++ +|++.+ |+ ..+++|.||+|||++|+..+++.. .. ++ ..+..+
T Consensus 185 ~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-l~-~~~~g~i~vd 262 (310)
T 1fl2_A 185 LQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGA-VE-RNRMGEIIID 262 (310)
T ss_dssp HHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SC-BCTTSCBCCC
T ss_pred HHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhcc-cc-ccCCCcEEcC
Confidence 1122333 467777764 6677654 467764 54 238999999999999987654311 00 01 111111
Q ss_pred CcccccccccCCCCCeEEecccCCCC--chhhHHHHHHHHHHHHc
Q 009897 418 SAPLYREGIHPQIPQLAILGYADSPS--ILRTTEMRSKCLAHFLA 460 (523)
Q Consensus 418 ~~~ly~~~~~~~~p~l~~iG~~~~~~--~~~~ae~Qa~~~a~~l~ 460 (523)
..+.++.|+||++|.+.... ....+..|++.+|..+.
T Consensus 263 ------~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 301 (310)
T 1fl2_A 263 ------AKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAF 301 (310)
T ss_dssp ------TTCBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHH
T ss_pred ------CCCccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHH
Confidence 12346899999999877643 45678888887777653
No 22
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.96 E-value=2.2e-28 Score=243.81 Aligned_cols=285 Identities=16% Similarity=0.200 Sum_probs=194.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
+.+||+|||||++|+++|..|++.|++|+|||+ ..+||.|..... ...++.+ ......++.+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~---------~~~~~~~--------~~~~~~~~~~ 76 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAEAPL---------VENYLGF--------KSIVGSELAK 76 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGGCSC---------BCCBTTB--------SSBCHHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccccch---------hhhcCCC--------cccCHHHHHH
Confidence 348999999999999999999999999999999 578888865210 0011111 1235678889
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
++.++++++++ .+++ .+|.+++... +.|.|.+ ++. ++.||+||+|||
T Consensus 77 ~~~~~~~~~~v--~~~~-~~v~~i~~~~----------------------~~~~v~~-~~~-------~~~~~~li~AtG 123 (319)
T 3cty_A 77 LFADHAANYAK--IREG-VEVRSIKKTQ----------------------GGFDIET-NDD-------TYHAKYVIITTG 123 (319)
T ss_dssp HHHHHHHTTSE--EEET-CCEEEEEEET----------------------TEEEEEE-SSS-------EEEEEEEEECCC
T ss_pred HHHHHHHHcCC--EEEE-eeEEEEEEeC----------------------CEEEEEE-CCC-------EEEeCEEEECCC
Confidence 99999998887 6666 6899988754 4577766 333 789999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEec
Q 009897 189 RYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVP 268 (523)
Q Consensus 189 ~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p 268 (523)
.. |+.|++| |.+.+.+..+|.....+. ....+++|+|||+|.+|+|+|..|++.+. +||++.|.+.+. +
T Consensus 124 ~~---~~~~~i~---g~~~~~~~~~~~~~~~~~-~~~~~~~v~viG~G~~g~e~a~~l~~~g~---~V~~i~~~~~~~-~ 192 (319)
T 3cty_A 124 TT---HKHLGVK---GESEYFGKGTSYCSTCDG-YLFKGKRVVTIGGGNSGAIAAISMSEYVK---NVTIIEYMPKYM-C 192 (319)
T ss_dssp EE---ECCCCCB---TTTTTBTTTEESCHHHHG-GGGBTSEEEEECCSHHHHHHHHHHTTTBS---EEEEECSSSSCC-S
T ss_pred CC---cccCCCC---ChHHhCCceEEEEEecch-hhcCCCeEEEECCCHHHHHHHHHHHhhCC---cEEEEEcCCccC-C
Confidence 65 6777777 766665555555433222 33568999999999999999999998865 499998876421 0
Q ss_pred CccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecC
Q 009897 269 DYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLP 348 (523)
Q Consensus 269 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~ 348 (523)
.
T Consensus 193 ~------------------------------------------------------------------------------- 193 (319)
T 3cty_A 193 E------------------------------------------------------------------------------- 193 (319)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cchhhhccCCCEEEEecC-ceEEecC-----cEEEc---CCce-eeeccEEEEecCCCCCccccccccchhh-hhhhcCC
Q 009897 349 RNFYDRVQGGGLSLMKSR-SFTFCKN-----GLVID---GETT-PLVTDIVIFATGYKSDEKLKNIFKSTYF-QKQITGS 417 (523)
Q Consensus 349 ~~~~~~~~~g~v~v~~~~-i~~~~~~-----~v~l~---dG~~-~~~~D~VI~ATG~~~~~~l~~~~~~~~l-~~~~~~~ 417 (523)
..+.+.+.+.+|+++.+. +.++.++ +|++. +|+. .+++|.||+|||++|+.++++.++...- +..+..+
T Consensus 194 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd 273 (319)
T 3cty_A 194 NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVD 273 (319)
T ss_dssp HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCC
T ss_pred HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCC
Confidence 001112223345555543 5555433 36665 6752 3899999999999999766543221100 0111111
Q ss_pred CcccccccccCCCCCeEEecccCCC--CchhhHHHHHHHHHHHHc
Q 009897 418 SAPLYREGIHPQIPQLAILGYADSP--SILRTTEMRSKCLAHFLA 460 (523)
Q Consensus 418 ~~~ly~~~~~~~~p~l~~iG~~~~~--~~~~~ae~Qa~~~a~~l~ 460 (523)
..+.++.|+||++|.+... .....|..|++.+|..+.
T Consensus 274 ------~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 312 (319)
T 3cty_A 274 ------SRQRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLY 312 (319)
T ss_dssp ------TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ------CCCccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHH
Confidence 1244689999999988654 456778889888877664
No 23
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.96 E-value=4.1e-28 Score=243.19 Aligned_cols=294 Identities=17% Similarity=0.212 Sum_probs=196.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEcc----CCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEA----RSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNK 105 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~----~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (523)
.+||+|||||++|+++|..|++.|++|+|||+ ...+||.|..... ...++.++ ......+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~---------~~~~~~~~-------~~~~~~~ 71 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTD---------VENFPGFP-------EGILGVE 71 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSE---------ECCSTTCT-------TCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccc---------cccCCCCc-------cCCCHHH
Confidence 47999999999999999999999999999999 5677887764210 00111111 1234678
Q ss_pred HHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEE
Q 009897 106 VMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVIL 185 (523)
Q Consensus 106 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVl 185 (523)
+.+++.++++++++ .+++++ |..++... +.|+|++ ++. ++.||+||+
T Consensus 72 ~~~~l~~~~~~~gv--~~~~~~-v~~i~~~~----------------------~~~~v~~-~~~-------~~~~~~vv~ 118 (333)
T 1vdc_A 72 LTDKFRKQSERFGT--TIFTET-VTKVDFSS----------------------KPFKLFT-DSK-------AILADAVIL 118 (333)
T ss_dssp HHHHHHHHHHHTTC--EEECCC-CCEEECSS----------------------SSEEEEC-SSE-------EEEEEEEEE
T ss_pred HHHHHHHHHHHCCC--EEEEeE-EEEEEEcC----------------------CEEEEEE-CCc-------EEEcCEEEE
Confidence 89999999999888 788876 88888754 4688887 443 799999999
Q ss_pred eeeecCCCCCCCCCCCCCCCCC----CCccEEecCCCCchh-hhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEE
Q 009897 186 CIGRYSDLPNTPDFPMNKGPEV----FDGKVLHSMNDDLAA-ELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLF 260 (523)
Q Consensus 186 AtG~~s~~p~~p~~p~~~g~~~----~~g~~~h~~~~~~~~-~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~ 260 (523)
|||.. |..|++| |.+. |.+..+|+..+.+.. ....+++|+|||+|.+|+|+|..|++.+. +|+++.
T Consensus 119 A~G~~---~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~---~V~lv~ 189 (333)
T 1vdc_A 119 AIGAV---AKRLSFV---GSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGS---KVYIIH 189 (333)
T ss_dssp CCCEE---ECCCCCB---TCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSS---EEEEEC
T ss_pred CCCCC---cCCCCCC---CccccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCC---eEEEEe
Confidence 99976 5677777 6554 655666665332211 11568999999999999999999998765 499999
Q ss_pred eeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCccccccc
Q 009897 261 KTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQIS 340 (523)
Q Consensus 261 r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 340 (523)
|.+.+. +.
T Consensus 190 ~~~~~~-~~----------------------------------------------------------------------- 197 (333)
T 1vdc_A 190 RRDAFR-AS----------------------------------------------------------------------- 197 (333)
T ss_dssp SSSSCC-SC-----------------------------------------------------------------------
T ss_pred cCCcCC-cc-----------------------------------------------------------------------
Confidence 876421 00
Q ss_pred CcceeecCcchh-hhccCCCEEEEecC-ceEEecCc-------EEEc---CCc-eeeeccEEEEecCCCCCccccccccc
Q 009897 341 SCMFTVLPRNFY-DRVQGGGLSLMKSR-SFTFCKNG-------LVID---GET-TPLVTDIVIFATGYKSDEKLKNIFKS 407 (523)
Q Consensus 341 ~~~~~~~~~~~~-~~~~~g~v~v~~~~-i~~~~~~~-------v~l~---dG~-~~~~~D~VI~ATG~~~~~~l~~~~~~ 407 (523)
..+. +.+++.+|+++.+. +.++.+++ |++. +|+ +.+++|.||+|||++|+..+++. ..
T Consensus 198 --------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l 268 (333)
T 1vdc_A 198 --------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDG-GV 268 (333)
T ss_dssp --------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTT-SS
T ss_pred --------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhhc-cc
Confidence 0111 22345667887664 67776432 7776 453 23899999999999999865431 11
Q ss_pred hhhhhhhcCCCcccccccccCCCCCeEEecccCCC--CchhhHHHHHHHHHHH----HcCCCCCC
Q 009897 408 TYFQKQITGSSAPLYREGIHPQIPQLAILGYADSP--SILRTTEMRSKCLAHF----LAGNSNLP 466 (523)
Q Consensus 408 ~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~--~~~~~ae~Qa~~~a~~----l~g~~~lp 466 (523)
. ++. .+ ........+.++.|+||++|.+... .....+..|++.+|.. |.++.++|
T Consensus 269 ~-~~~--~G-~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~~ 329 (333)
T 1vdc_A 269 E-LDS--DG-YVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQEIGSQE 329 (333)
T ss_dssp C-BCT--TS-CBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred c-ccC--CC-CEEechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHHHHHHHhccccc
Confidence 1 110 00 0011112345689999999988654 3456677777766654 44444444
No 24
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.96 E-value=1.8e-29 Score=260.60 Aligned_cols=289 Identities=13% Similarity=0.142 Sum_probs=190.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCc--eEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFK--PIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKV 106 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~--v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (523)
|+++|+|||||++|+++|..|++.|++ |+|||+.+..+..- |.+ ++... . ...... . +
T Consensus 1 M~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~----~~l----~~~~~--~-g~~~~~--~-------~ 60 (410)
T 3ef6_A 1 MATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDR----PSL----SKAVL--D-GSLERP--P-------I 60 (410)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCS----GGG----GTHHH--H-TSSSSC--C-------B
T ss_pred CCCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCC----ccc----cHHHh--C-CCCCHH--H-------h
Confidence 457999999999999999999999987 99999987654210 000 00000 0 000000 0 0
Q ss_pred HHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEe
Q 009897 107 MEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILC 186 (523)
Q Consensus 107 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlA 186 (523)
.+..++.++.++ .++++++|+.++... +.|++.++. ++.||+||+|
T Consensus 61 -~~~~~~~~~~~i--~~~~~~~v~~id~~~------------------------~~v~~~~g~-------~~~~d~lvlA 106 (410)
T 3ef6_A 61 -LAEADWYGEARI--DMLTGPEVTALDVQT------------------------RTISLDDGT-------TLSADAIVIA 106 (410)
T ss_dssp -SSCTTHHHHTTC--EEEESCCEEEEETTT------------------------TEEEETTSC-------EEECSEEEEC
T ss_pred -cCCHHHHHHCCC--EEEeCCEEEEEECCC------------------------CEEEECCCC-------EEECCEEEEc
Confidence 111233456677 889999999998754 578777665 8999999999
Q ss_pred eeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchh----hhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEee
Q 009897 187 IGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAA----ELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKT 262 (523)
Q Consensus 187 tG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~----~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~ 262 (523)
||+. |+.|++| |.+. ..+.+.....+.. ....+++|+|||+|.+|+|+|..+++.+.+ ||++.+.
T Consensus 107 tG~~---p~~~~ip---G~~~--~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtvv~~~ 175 (410)
T 3ef6_A 107 TGSR---ARTMALP---GSQL--PGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLS---VTILEAG 175 (410)
T ss_dssp CCEE---ECCCCCT---TTTS--TTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred cCCc---ccCCCCC---Cccc--cceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCe---EEEEecC
Confidence 9964 7888888 6542 1233333222211 123589999999999999999999998754 9999987
Q ss_pred ceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCc
Q 009897 263 VHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSC 342 (523)
Q Consensus 263 ~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 342 (523)
+.++ +... ..
T Consensus 176 ~~~l-~~~~-----------------------------------~~---------------------------------- 185 (410)
T 3ef6_A 176 DELL-VRVL-----------------------------------GR---------------------------------- 185 (410)
T ss_dssp SSSS-HHHH-----------------------------------CH----------------------------------
T ss_pred Cccc-hhhc-----------------------------------CH----------------------------------
Confidence 7522 1100 00
Q ss_pred ceeecCcchhhhccCCCEEEEecC-ceEEecC----cEEEcCCceeeeccEEEEecCCCCCccccccccchhhhhhhcCC
Q 009897 343 MFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN----GLVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQITGS 417 (523)
Q Consensus 343 ~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~----~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~~ 417 (523)
.+.+.+.+.+++.+|+++.+. +.+++.+ +|+++||++ +++|.||+|||++|+..+++..+...-.. +..
T Consensus 186 ---~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~-i~aD~Vv~a~G~~p~~~l~~~~gl~~~~g-i~v- 259 (410)
T 3ef6_A 186 ---RIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRS-FVADSALICVGAEPADQLARQAGLACDRG-VIV- 259 (410)
T ss_dssp ---HHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCE-EECSEEEECSCEEECCHHHHHTTCCBSSS-EEC-
T ss_pred ---HHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCE-EEcCEEEEeeCCeecHHHHHhCCCccCCe-EEE-
Confidence 011122234445567787664 7777765 488999998 99999999999999976544322221111 111
Q ss_pred CcccccccccCCCCCeEEecccCCCC----------chhhHHHHHHHHHHHHcCCC
Q 009897 418 SAPLYREGIHPQIPQLAILGYADSPS----------ILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 418 ~~~ly~~~~~~~~p~l~~iG~~~~~~----------~~~~ae~Qa~~~a~~l~g~~ 463 (523)
. ..+.++.|+||++|.+.... .+..+..|++.+|+.|.|+.
T Consensus 260 --d---~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 310 (410)
T 3ef6_A 260 --D---HCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKN 310 (410)
T ss_dssp --C---TTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred --c---cCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCC
Confidence 1 22346899999999765421 25789999999999999874
No 25
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.96 E-value=1.2e-28 Score=254.86 Aligned_cols=291 Identities=16% Similarity=0.146 Sum_probs=193.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCc--eEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhH
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFK--PIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNK 105 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~--v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (523)
++.+||+|||||++|+++|..|++.|++ |+|+|+.+.++..... + ............+
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~----l----------------~~~~~~~~~~~~~ 66 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPP----L----------------SKEYLAREKTFER 66 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGG----G----------------GTTTTTTSSCSGG
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCccc----C----------------CHHHHcCCCCHHH
Confidence 3458999999999999999999999987 9999998765321100 0 0000000111222
Q ss_pred HHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEE
Q 009897 106 VMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVIL 185 (523)
Q Consensus 106 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVl 185 (523)
+..+..++.++.++ .++++++|+.++... +.|++.++. .+.||+||+
T Consensus 67 ~~~~~~~~~~~~~i--~~~~~~~v~~id~~~------------------------~~v~~~~g~-------~~~~d~lvl 113 (415)
T 3lxd_A 67 ICIRPAQFWEDKAV--EMKLGAEVVSLDPAA------------------------HTVKLGDGS-------AIEYGKLIW 113 (415)
T ss_dssp GBSSCHHHHHHTTE--EEEETCCEEEEETTT------------------------TEEEETTSC-------EEEEEEEEE
T ss_pred hccCCHHHHHHCCc--EEEeCCEEEEEECCC------------------------CEEEECCCC-------EEEeeEEEE
Confidence 33333455667777 788999999998754 577777665 899999999
Q ss_pred eeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchh----hhcC-CCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEE
Q 009897 186 CIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAA----ELIN-GKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLF 260 (523)
Q Consensus 186 AtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~----~~~~-~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~ 260 (523)
|||+. |+.|++| |.+.. .+.+.....+.. .... +++|+|||+|.+|+|+|..+++.+.. ||++.
T Consensus 114 AtG~~---~~~~~i~---g~~~~--~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtvv~ 182 (415)
T 3lxd_A 114 ATGGD---PRRLSCV---GADLA--GVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVN---VTLLE 182 (415)
T ss_dssp CCCEE---CCCCBTT---SSCCB--TEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEE
T ss_pred ccCCc---cCCCCCC---Ccccc--CEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCe---EEEEe
Confidence 99954 7888888 65421 122222111110 1223 89999999999999999999998754 99999
Q ss_pred eeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCccccccc
Q 009897 261 KTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQIS 340 (523)
Q Consensus 261 r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 340 (523)
+.+.++ +... +
T Consensus 183 ~~~~~l-~~~~--~------------------------------------------------------------------ 193 (415)
T 3lxd_A 183 ALPRVL-ARVA--G------------------------------------------------------------------ 193 (415)
T ss_dssp SSSSTT-TTTS--C------------------------------------------------------------------
T ss_pred cCCchh-hhhc--C------------------------------------------------------------------
Confidence 877522 2110 0
Q ss_pred CcceeecCcchhhhccCCCEEEEecC-ceEEecC-----cEEEcCCceeeeccEEEEecCCCCCccccccccchhhhhhh
Q 009897 341 SCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN-----GLVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQI 414 (523)
Q Consensus 341 ~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~-----~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~ 414 (523)
+.+.+.+.+.+++.+|+++.+. +.++..+ +|+++||++ +++|.||+|||++|+..+++..+...-.. +
T Consensus 194 ----~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~-i~aD~Vv~a~G~~p~~~l~~~~gl~~~~g-i 267 (415)
T 3lxd_A 194 ----EALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSV-IPADIVIVGIGIVPCVGALISAGASGGNG-V 267 (415)
T ss_dssp ----HHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCE-EECSEEEECSCCEESCHHHHHTTCCCSSS-E
T ss_pred ----HHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCE-EEcCEEEECCCCccChHHHHhCCCCcCCC-E
Confidence 0011122344555678888764 7777653 478899998 99999999999999976543222211111 1
Q ss_pred cCCCcccccccccCCCCCeEEecccCCCC------------chhhHHHHHHHHHHHHcCCC
Q 009897 415 TGSSAPLYREGIHPQIPQLAILGYADSPS------------ILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 415 ~~~~~~ly~~~~~~~~p~l~~iG~~~~~~------------~~~~ae~Qa~~~a~~l~g~~ 463 (523)
.. ...+.++.|+||++|.+.... .+..+..||+.+|+.|.|+.
T Consensus 268 ~v------d~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 322 (415)
T 3lxd_A 268 DV------DEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAP 322 (415)
T ss_dssp EC------CTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCC
T ss_pred EE------CCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCC
Confidence 11 123346899999999765322 24789999999999999874
No 26
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.95 E-value=1.5e-27 Score=237.07 Aligned_cols=176 Identities=20% Similarity=0.247 Sum_probs=128.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHH
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVM 107 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (523)
.|+|||+||||||+|++||.+|++.|++|+|||+ ..+||++..... .+.++. .......++.
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~~~~~---------i~~~p~--------~~~~~~~~~~ 65 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMANTEE---------VENFPG--------FEMITGPDLS 65 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGGGCSC---------BCCSTT--------CSSBCHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeeecccc---------cCCcCC--------ccccchHHHH
Confidence 3679999999999999999999999999999998 468988765110 001111 1223456777
Q ss_pred HHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEee
Q 009897 108 EYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCI 187 (523)
Q Consensus 108 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAt 187 (523)
........++.. .+..+..+....... ..+...++. ++.||+||+||
T Consensus 66 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~------------------------~~~~~~~~~-------~~~~d~liiAt 112 (312)
T 4gcm_A 66 TKMFEHAKKFGA--VYQYGDIKSVEDKGE------------------------YKVINFGNK-------ELTAKAVIIAT 112 (312)
T ss_dssp HHHHHHHHHTTC--EEEECCCCEEEECSS------------------------CEEEECSSC-------EEEEEEEEECC
T ss_pred HHHHHHHhhccc--cccceeeeeeeeeec------------------------ceeeccCCe-------EEEeceeEEcc
Confidence 777666776665 455555554444322 223333333 89999999999
Q ss_pred eecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 188 GRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 188 G~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
|+. |+.|++| |.+.+.++.+++....+. ..+.+|+|+|||+|.+|+|+|..+++.+.+ ||++.|.+.
T Consensus 113 Gs~---~~~~~ip---G~~~~~~~~v~~~~~~~~-~~~~~k~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~ 179 (312)
T 4gcm_A 113 GAE---YKKIGVP---GEQELGGRGVSYCAVCDG-AFFKNKRLFVIGGGDSAVEEGTFLTKFADK---VTIVHRRDE 179 (312)
T ss_dssp CEE---ECCCCCT---TTTTTBTTTEESCHHHHG-GGGTTCEEEEECCSHHHHHHHHHHTTTCSE---EEEECSSSS
T ss_pred cCc---cCcCCCC---ChhhhCCccEEeeeccCc-cccCCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEecccc
Confidence 964 7888899 888877777776655444 346799999999999999999999998754 999999775
No 27
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.95 E-value=6e-28 Score=253.29 Aligned_cols=203 Identities=16% Similarity=0.288 Sum_probs=144.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCC-----CceEEEccCCCCCccccc--ccCcccccC-----------CcCceeeCCCCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENG-----FKPIVFEARSGIGGVWSQ--TIESTKLQT-----------PKSFYQFSDFAW 92 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g-----~~v~v~e~~~~~GG~w~~--~~~~~~~~~-----------~~~~~~~~~~~~ 92 (523)
+||+|||||++|+++|..|++.| .+|+|||+.+.+| |.. ..++..++. |...+.|..+..
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 69999999999999999999999 9999999999887 554 234444432 222222211000
Q ss_pred C-------CCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCe--EE
Q 009897 93 P-------NSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKW--NV 163 (523)
Q Consensus 93 ~-------~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v 163 (523)
. ..+...++.+.++.+|+++++++++. .++++++|+++++.. + ..+.| .|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~i~~~~~V~~i~~~~--~-----------------~~~~~~~~V 167 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQE--QSRYGEEVLRIEPML--S-----------------AGQVEALRV 167 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTT--TEEESEEEEEEEEEE--E-----------------TTEEEEEEE
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCC--eEEeCCEEEEEEEec--C-----------------CCceEEEEE
Confidence 0 00124567889999999999999987 899999999999862 0 01345 55
Q ss_pred EEeecccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCc--cEEecCCCCchhhhc-----CCCEEEEEcCC
Q 009897 164 TVQEARNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDG--KVLHSMNDDLAAELI-----NGKRVTVIGFQ 236 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g--~~~h~~~~~~~~~~~-----~~k~V~VvG~G 236 (523)
++.++. ++.+++.||+||+|||. .|.+|+ +++.+.+ .++|+..+......+ .+++|+|||+|
T Consensus 168 ~~~~g~---g~~~~~~~d~lVlAtG~---~p~~p~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG 236 (463)
T 3s5w_A 168 ISRNAD---GEELVRTTRALVVSPGG---TPRIPQ-----VFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGG 236 (463)
T ss_dssp EEEETT---SCEEEEEESEEEECCCC---EECCCG-----GGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCS
T ss_pred EEecCC---CceEEEEeCEEEECCCC---CCCCcc-----hhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCC
Confidence 555542 34447899999999995 477765 2334555 689998775432233 58999999999
Q ss_pred CCHHHHHHHHHHhcCCccCEEEEEeeceeEecC
Q 009897 237 KSAVDVAAEVANRNGVRYPCTLLFKTVHWMVPD 269 (523)
Q Consensus 237 ~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p~ 269 (523)
.||+|+|..|++.... .+||++.|++. +.|.
T Consensus 237 ~sg~e~a~~l~~~~~~-~~Vt~v~r~~~-~~p~ 267 (463)
T 3s5w_A 237 QSAAEAFIDLNDSYPS-VQADMILRASA-LKPA 267 (463)
T ss_dssp HHHHHHHHHHHHHCTT-EEEEEECSSSS-CCBC
T ss_pred HhHHHHHHHHHhcCCC-CeEEEEEeCCC-CcCc
Confidence 9999999999998321 45999999887 3443
No 28
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.95 E-value=8.9e-27 Score=247.31 Aligned_cols=288 Identities=14% Similarity=0.175 Sum_probs=203.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
..+||+||||||+|+++|..|++.|++|+|+|+ .+||.|.....- ..+. ...+....++.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~~~---------~~~~--------~~~~~~~~~l~~ 271 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTVDI---------ENYI--------SVPKTEGQKLAG 271 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCSCB---------CCBT--------TBSSBCHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccccccc---------cccC--------CCCCCCHHHHHH
Confidence 358999999999999999999999999999986 589998752210 0011 112346688999
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
+++++++++++ .++++++|+.+++.. + ..+.|.|++.++. ++.||+||+|||
T Consensus 272 ~l~~~~~~~gv--~v~~~~~v~~i~~~~--~-----------------~~~~~~V~~~~g~-------~~~~d~vVlAtG 323 (521)
T 1hyu_A 272 ALKAHVSDYDV--DVIDSQSASKLVPAA--T-----------------EGGLHQIETASGA-------VLKARSIIIATG 323 (521)
T ss_dssp HHHHHHHTSCE--EEECSCCEEEEECCS--S-----------------TTSCEEEEETTSC-------EEEEEEEEECCC
T ss_pred HHHHHHHHcCC--EEEcCCEEEEEEecc--C-----------------CCceEEEEECCCC-------EEEcCEEEECCC
Confidence 99999999998 789999999998653 0 0246899887665 799999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEec
Q 009897 189 RYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVP 268 (523)
Q Consensus 189 ~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p 268 (523)
+. |+.|++| |.+.|.+..+|.....+. ..+.+++|+|||+|.+|+|+|..|+..+.+ ||++.|.+.+. +
T Consensus 324 ~~---~~~~~ip---G~~~~~~~~v~~~~~~~~-~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~---Vtlv~~~~~l~-~ 392 (521)
T 1hyu_A 324 AK---WRNMNVP---GEDQYRTKGVTYCPHCDG-PLFKGKRVAVIGGGNSGVEAAIDLAGIVEH---VTLLEFAPEMK-A 392 (521)
T ss_dssp EE---ECCCCCT---TTTTTTTTTEECCTTCCG-GGGBTSEEEEECCSHHHHHHHHHHHHHBSE---EEEECSSSSCC-S
T ss_pred CC---cCCCCCC---ChhhhcCceEEEeecCch-hhcCCCeEEEECCCHHHHHHHHHHHhhCCE---EEEEEeCcccC-c
Confidence 75 6677788 877777766776655443 346799999999999999999999998754 99998876521 0
Q ss_pred CccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecC
Q 009897 269 DYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLP 348 (523)
Q Consensus 269 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~ 348 (523)
.
T Consensus 393 ~------------------------------------------------------------------------------- 393 (521)
T 1hyu_A 393 D------------------------------------------------------------------------------- 393 (521)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cchhhhccC-CCEEEEecC-ceEEecC-----cEEEcC---Cc-eeeeccEEEEecCCCCCccccccccchhhhhhhcCC
Q 009897 349 RNFYDRVQG-GGLSLMKSR-SFTFCKN-----GLVIDG---ET-TPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQITGS 417 (523)
Q Consensus 349 ~~~~~~~~~-g~v~v~~~~-i~~~~~~-----~v~l~d---G~-~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~~ 417 (523)
..+.+.+++ .+|+++.+. +.++.++ +|++.+ |+ ..+++|.||+|||++|+..+++.. .. +.. .
T Consensus 394 ~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~~-l~-~~~----~ 467 (521)
T 1hyu_A 394 QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGA-LE-RNR----M 467 (521)
T ss_dssp HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTTT-SC-BCT----T
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhhh-hc-cCC----C
Confidence 011223333 578888774 6777653 366654 54 238999999999999987654310 00 010 0
Q ss_pred CcccccccccCCCCCeEEecccCCCC--chhhHHHHHHHHHHHH
Q 009897 418 SAPLYREGIHPQIPQLAILGYADSPS--ILRTTEMRSKCLAHFL 459 (523)
Q Consensus 418 ~~~ly~~~~~~~~p~l~~iG~~~~~~--~~~~ae~Qa~~~a~~l 459 (523)
....-...+.++.|+||++|.+.... .+..|..|++.+|..+
T Consensus 468 G~I~Vd~~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i 511 (521)
T 1hyu_A 468 GEIIIDAKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSA 511 (521)
T ss_dssp SCBCCCTTCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHH
T ss_pred CcEEeCCCCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHH
Confidence 00011122346899999999887643 4567777877776654
No 29
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.95 E-value=2.8e-29 Score=256.33 Aligned_cols=277 Identities=14% Similarity=0.138 Sum_probs=188.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
..+|+|||||++|++||..|...+.+|+|||+.+.++.. . ...+.. +. ...+.+++..+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~-~-------~~l~~~---l~----------g~~~~~~l~~~ 67 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYY-R-------PRLNEI---IA----------KNKSIDDILIK 67 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBC-G-------GGHHHH---HH----------SCCCGGGTBSS
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcc-c-------ChhhHH---Hc----------CCCCHHHccCC
Confidence 468999999999999999997788999999998766410 0 000000 00 01122333344
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
..++.+++++ .++++++|+++++.. .+|++.++. ++.||+||+|||+
T Consensus 68 ~~~~~~~~~i--~~~~~~~V~~id~~~------------------------~~v~~~~g~-------~~~yd~lvlAtG~ 114 (385)
T 3klj_A 68 KNDWYEKNNI--KVITSEFATSIDPNN------------------------KLVTLKSGE-------KIKYEKLIIASGS 114 (385)
T ss_dssp CHHHHHHTTC--EEECSCCEEEEETTT------------------------TEEEETTSC-------EEECSEEEECCCE
T ss_pred CHHHHHHCCC--EEEeCCEEEEEECCC------------------------CEEEECCCC-------EEECCEEEEecCC
Confidence 4556677888 899999999999754 467777765 8999999999996
Q ss_pred cCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhh----cCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeecee
Q 009897 190 YSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAEL----INGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHW 265 (523)
Q Consensus 190 ~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~----~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~ 265 (523)
.|+.|++| |.+ .+++.....+.... ..+++|+|||+|.+|+|+|..+++.+.+ ||++.|.+.+
T Consensus 115 ---~p~~p~i~---G~~----~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~---Vtvv~~~~~~ 181 (385)
T 3klj_A 115 ---IANKIKVP---HAD----EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTP---ASIGIILEYP 181 (385)
T ss_dssp ---EECCCCCT---TCS----CEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSSS
T ss_pred ---CcCCCCCC---CCC----CeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCe---EEEEEcCCcc
Confidence 47888888 765 34444433322111 1279999999999999999999998754 9999998763
Q ss_pred EecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCccee
Q 009897 266 MVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFT 345 (523)
Q Consensus 266 ~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~ 345 (523)
++... + +
T Consensus 182 -l~~~~--~----------------------------------------------------------------------~ 188 (385)
T 3klj_A 182 -LERQL--D----------------------------------------------------------------------R 188 (385)
T ss_dssp -CTTTS--C----------------------------------------------------------------------H
T ss_pred -chhhc--C----------------------------------------------------------------------H
Confidence 23210 0 0
Q ss_pred ecCcchhhhccCCCEEEEecC-ceEEecCcEEEcCCceeeeccEEEEecCCCCCccccccccchhhhhhhcCCCcccccc
Q 009897 346 VLPRNFYDRVQGGGLSLMKSR-SFTFCKNGLVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQITGSSAPLYRE 424 (523)
Q Consensus 346 ~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~~~~~ly~~ 424 (523)
.+.+.+.+.+++.+|+++.+. +.++ |++ +++|.||+|||++|+..+++..+...-.. ..-..
T Consensus 189 ~~~~~~~~~l~~~gV~~~~~~~v~~i---------g~~-~~~D~vv~a~G~~p~~~~~~~~gl~~~~g-------i~vd~ 251 (385)
T 3klj_A 189 DGGLFLKDKLDRLGIKIYTNSNFEEM---------GDL-IRSSCVITAVGVKPNLDFIKDTEIASKRG-------ILVND 251 (385)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCGGGC---------HHH-HHHSEEEECCCEEECCGGGTTSCCCBSSS-------EEECT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEc---------CeE-EecCeEEECcCcccChhhhhhcCCCcCCC-------EEECC
Confidence 011112234455667777664 4443 666 99999999999999976654332221111 11113
Q ss_pred cccCCCCCeEEecccCC-----CCchhhHHHHHHHHHHHHcCCC
Q 009897 425 GIHPQIPQLAILGYADS-----PSILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 425 ~~~~~~p~l~~iG~~~~-----~~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
.+.++.|+||++|.+.. ...+..+..||+.+|+.|.|+.
T Consensus 252 ~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 295 (385)
T 3klj_A 252 HMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGED 295 (385)
T ss_dssp TCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCC
Confidence 34468999999998764 3456789999999999999864
No 30
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.95 E-value=6.2e-29 Score=256.09 Aligned_cols=287 Identities=16% Similarity=0.226 Sum_probs=188.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--ceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGF--KPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~--~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
++|+|||||++|+++|..|++.|+ +|+|||+.+..+..- |. .++..... .. ...++..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~----~~----l~~~~l~~---~~---------~~~~~~~ 61 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQR----PP----LSKAYLKS---GG---------DPNSLMF 61 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCS----GG----GGTGGGGS---CC---------CTTSSBS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCC----cc----CCHHHHCC---CC---------CHHHccC
Confidence 689999999999999999999998 899999987553110 00 00000000 00 0011111
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
+..++..+.++ .++. ++|+.++... ..|++.++. ++.||+||+|||
T Consensus 62 ~~~~~~~~~~i--~~~~-~~v~~id~~~------------------------~~v~~~~g~-------~~~~d~lvlAtG 107 (404)
T 3fg2_P 62 RPEKFFQDQAI--ELIS-DRMVSIDREG------------------------RKLLLASGT-------AIEYGHLVLATG 107 (404)
T ss_dssp SCHHHHHHTTE--EEEC-CCEEEEETTT------------------------TEEEESSSC-------EEECSEEEECCC
T ss_pred CCHHHHHhCCC--EEEE-EEEEEEECCC------------------------CEEEECCCC-------EEECCEEEEeeC
Confidence 22344456676 6667 8999988754 467777765 899999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCccEEecCCCCch----hhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 189 RYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLA----AELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 189 ~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~----~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
.. |+.|++| |.+. . .+++.....+. .....+++|+|||+|.+|+|+|..+++.+.+ ||++.+.+.
T Consensus 108 ~~---p~~~~i~---g~~~-~-~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtvv~~~~~ 176 (404)
T 3fg2_P 108 AR---NRMLDVP---NASL-P-DVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLE---VDVVELAPR 176 (404)
T ss_dssp EE---ECCCCST---TTTS-T-TEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSS
T ss_pred CC---ccCCCCC---CCCC-C-cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCE---EEEEeCCCc
Confidence 64 7888888 6442 1 23322221111 0123589999999999999999999998754 999998765
Q ss_pred eEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcce
Q 009897 265 WMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMF 344 (523)
Q Consensus 265 ~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 344 (523)
++ +... +
T Consensus 177 ~~-~~~~--~---------------------------------------------------------------------- 183 (404)
T 3fg2_P 177 VM-ARVV--T---------------------------------------------------------------------- 183 (404)
T ss_dssp TT-TTTS--C----------------------------------------------------------------------
T ss_pred ch-hhcc--C----------------------------------------------------------------------
Confidence 22 1110 0
Q ss_pred eecCcchhhhccCCCEEEEecC-ceEEecC-----cEEEcCCceeeeccEEEEecCCCCCccccccccchhhhhhhcCCC
Q 009897 345 TVLPRNFYDRVQGGGLSLMKSR-SFTFCKN-----GLVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQITGSS 418 (523)
Q Consensus 345 ~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~-----~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~~~ 418 (523)
+.+.+.+.+.+++.+|+++.+. +.+++.+ +|+++||++ +++|.||+|||++|+..+.+..+...-..
T Consensus 184 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~-i~aD~Vv~a~G~~p~~~l~~~~gl~~~~G------ 256 (404)
T 3fg2_P 184 PEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNT-LPCDLVVVGVGVIPNVEIAAAAGLPTAAG------ 256 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCE-EECSEEEECCCEEECCHHHHHTTCCBSSS------
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCE-EEcCEEEECcCCccCHHHHHhCCCCCCCC------
Confidence 0011222344556678888774 7777643 488899998 99999999999999976544322221111
Q ss_pred cccccccccCCCCCeEEecccCCCC-----------chhhHHHHHHHHHHHHcCCC
Q 009897 419 APLYREGIHPQIPQLAILGYADSPS-----------ILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 419 ~~ly~~~~~~~~p~l~~iG~~~~~~-----------~~~~ae~Qa~~~a~~l~g~~ 463 (523)
......+.++.|+||++|.+.... .+..+..||+.+|+.|.|+.
T Consensus 257 -i~vd~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 311 (404)
T 3fg2_P 257 -IIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDA 311 (404)
T ss_dssp -EEECTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCC
T ss_pred -EEECCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCC
Confidence 111123346899999999865432 25789999999999999874
No 31
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.95 E-value=1.1e-27 Score=251.85 Aligned_cols=302 Identities=17% Similarity=0.179 Sum_probs=179.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVM 107 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (523)
.+||+|||||++|+++|..|++. |.+|+|||+++.++ |.. +++ |. .+.. .+... ...++...++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~--~gl----~~---~~~g-~~~~~-~~~~~~~~~~~ 69 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGG--CGI----PY---YVSG-EVSNI-ESLQATPYNVV 69 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--ccc--ccc----ch---hhcC-CCCch-HHhccccchhc
Confidence 47999999999999999999998 89999999988764 111 000 00 0000 00000 01111222356
Q ss_pred HHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEee
Q 009897 108 EYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCI 187 (523)
Q Consensus 108 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAt 187 (523)
.+++.+.+++++ .++++++|+.++... . .+.+.+.. +++...+.||+||+||
T Consensus 70 ~~~~~~~~~~gi--~~~~~~~V~~id~~~----------------------~--~v~~~~~~--~g~~~~~~~d~lviAt 121 (472)
T 3iwa_A 70 RDPEFFRINKDV--EALVETRAHAIDRAA----------------------H--TVEIENLR--TGERRTLKYDKLVLAL 121 (472)
T ss_dssp -----------C--EEECSEEEEEEETTT----------------------T--EEEEEETT--TCCEEEEECSEEEECC
T ss_pred cCHHHHhhhcCc--EEEECCEEEEEECCC----------------------C--EEEEeecC--CCCEEEEECCEEEEeC
Confidence 777777877888 788999999998754 3 34444311 1123478999999999
Q ss_pred eecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhh------cCCCEEEEEcCCCCHHHHHHHHHHh-cCCccCEEEEE
Q 009897 188 GRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAEL------INGKRVTVIGFQKSAVDVAAEVANR-NGVRYPCTLLF 260 (523)
Q Consensus 188 G~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~------~~~k~V~VvG~G~sg~d~a~~l~~~-~~~~~~Vt~~~ 260 (523)
|.. |..|++| |.+ .. .+++.....+.... ..+++|+|||+|.+|+|+|..++.. +.. ||++.
T Consensus 122 G~~---p~~p~i~---G~~-~~-~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~---Vtlv~ 190 (472)
T 3iwa_A 122 GSK---ANRPPVE---GMD-LA-GVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGID---TTVVE 190 (472)
T ss_dssp CEE---ECCCSCT---TTT-SB-TEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCE---EEEEC
T ss_pred CCC---cCCCCCC---CCC-CC-CEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCc---EEEEE
Confidence 964 7888888 765 22 24443332221111 2479999999999999999999998 754 99999
Q ss_pred eeceeEec-CccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccc
Q 009897 261 KTVHWMVP-DYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQI 339 (523)
Q Consensus 261 r~~~~~~p-~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 339 (523)
|.+. ++| ..+
T Consensus 191 ~~~~-~l~~~~~-------------------------------------------------------------------- 201 (472)
T 3iwa_A 191 LADQ-IMPGFTS-------------------------------------------------------------------- 201 (472)
T ss_dssp SSSS-SSTTTSC--------------------------------------------------------------------
T ss_pred ccCc-ccccccC--------------------------------------------------------------------
Confidence 8765 223 111
Q ss_pred cCcceeecCcchhhhccCCCEEEEecC-ceEEec-Cc---EEEcCCceeeeccEEEEecCCCCCccccccccchhhhhhh
Q 009897 340 SSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCK-NG---LVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQI 414 (523)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~-~~---v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~ 414 (523)
+.+.+.+.+.+++.+|+++.+. +.+++. ++ ++++||++ +++|.||+|||++|+..+.+..+.. +..
T Consensus 202 -----~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~-i~aD~Vv~a~G~~p~~~l~~~~gl~-~~~-- 272 (472)
T 3iwa_A 202 -----KSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRT-LDADLVILAAGVSPNTQLARDAGLE-LDP-- 272 (472)
T ss_dssp -----HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCE-EECSEEEECSCEEECCHHHHHHTCC-BCT--
T ss_pred -----HHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCE-EEcCEEEECCCCCcCHHHHHhCCcc-CCC--
Confidence 0011122344555677888774 777765 33 67889988 9999999999999987653322111 000
Q ss_pred cCCCcccccccccCCCCCeEEecccCC-----------CCchhhHHHHHHHHHHHHcCCC
Q 009897 415 TGSSAPLYREGIHPQIPQLAILGYADS-----------PSILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 415 ~~~~~~ly~~~~~~~~p~l~~iG~~~~-----------~~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
.........+.++.||||++|.+.. ....+.+..|++.+|..|.|+.
T Consensus 273 --~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 330 (472)
T 3iwa_A 273 --RGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGD 330 (472)
T ss_dssp --TCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCC
T ss_pred --CCCEEECCCcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCC
Confidence 0011111234468899999998752 1235689999999999999864
No 32
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.95 E-value=7.4e-28 Score=259.96 Aligned_cols=297 Identities=18% Similarity=0.200 Sum_probs=200.9
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHC--CCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChh
Q 009897 27 PKMERKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHN 104 (523)
Q Consensus 27 ~~~~~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (523)
+++.++|+|||||++||+||..|++. |.+|+|||+++.+| |.. ..+ |. ... ....+...
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~--~~~----~~l--p~---~~~--------g~~~~~~~ 93 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS--FAN----CGL--PY---YIG--------GVITERQK 93 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS--BCG----GGH--HH---HHT--------TSSCCGGG
T ss_pred cccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc--ccC----CCC--ch---hhc--------CcCCChHH
Confidence 34568999999999999999999998 89999999988764 111 000 00 000 01112334
Q ss_pred HHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEE
Q 009897 105 KVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVI 184 (523)
Q Consensus 105 ~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vV 184 (523)
.+..+++.+++++++ .++++++|++++... +. +.+.+.. +++...+.||+||
T Consensus 94 ~~~~~~~~~~~~~gi--~v~~~~~V~~id~~~----------------------~~--v~v~~~~--~g~~~~~~~d~lv 145 (588)
T 3ics_A 94 LLVQTVERMSKRFNL--DIRVLSEVVKINKEE----------------------KT--ITIKNVT--TNETYNEAYDVLI 145 (588)
T ss_dssp GBSSCHHHHHHHTTC--EEECSEEEEEEETTT----------------------TE--EEEEETT--TCCEEEEECSEEE
T ss_pred hhccCHHHHHHhcCc--EEEECCEEEEEECCC----------------------CE--EEEeecC--CCCEEEEeCCEEE
Confidence 456788888999998 799999999998764 33 4443311 1233478999999
Q ss_pred EeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhh------hcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEE
Q 009897 185 LCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAE------LINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTL 258 (523)
Q Consensus 185 lAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~------~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~ 258 (523)
+|||+. |..|++| |.+...+ +++.....+... ...+++|+|||+|.+|+|+|..++..+.+ ||+
T Consensus 146 iAtG~~---p~~p~i~---G~~~~~~-v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtl 215 (588)
T 3ics_A 146 LSPGAK---PIVPSIP---GIEEAKA-LFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIE---VTL 215 (588)
T ss_dssp ECCCEE---ECCCCCT---TTTTCTT-EEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCE---EEE
T ss_pred ECCCCC---CCCCCCC---CcccCCC-eEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCe---EEE
Confidence 999964 7888888 7643332 444443332211 24689999999999999999999998754 999
Q ss_pred EEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCccccc
Q 009897 259 LFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQ 338 (523)
Q Consensus 259 ~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~ 338 (523)
+.|.+. ++|..+
T Consensus 216 v~~~~~-~l~~~~------------------------------------------------------------------- 227 (588)
T 3ics_A 216 VEMANQ-VMPPID------------------------------------------------------------------- 227 (588)
T ss_dssp ECSSSS-SCTTSC-------------------------------------------------------------------
T ss_pred EecCCc-ccccCC-------------------------------------------------------------------
Confidence 998765 333221
Q ss_pred ccCcceeecCcchhhhccCCCEEEEecC-ceEEec--CcEEEcCCceeeeccEEEEecCCCCCccccccccchhh-hhhh
Q 009897 339 ISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCK--NGLVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYF-QKQI 414 (523)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~--~~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l-~~~~ 414 (523)
+.+.+.+.+.+++.+|+++.+. +.+++. ++|++++|++ +++|.||+|||++|+..+++..+...- +..+
T Consensus 228 ------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~-i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i 300 (588)
T 3ics_A 228 ------YEMAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSGSV-IQTDMLILAIGVQPESSLAKGAGLALGVRGTI 300 (588)
T ss_dssp ------HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCE-EECSEEEECSCEEECCHHHHHTTCCBCGGGCB
T ss_pred ------HHHHHHHHHHHHHcCCEEEECCeEEEEecCCCEEEECCCCE-EEcCEEEEccCCCCChHHHHhcCceEcCCCCE
Confidence 0011122234455667888764 778876 5699999988 999999999999998765432221110 1111
Q ss_pred cCCCcccccccccCCCCCeEEecccCC-----------CCchhhHHHHHHHHHHHHcC
Q 009897 415 TGSSAPLYREGIHPQIPQLAILGYADS-----------PSILRTTEMRSKCLAHFLAG 461 (523)
Q Consensus 415 ~~~~~~ly~~~~~~~~p~l~~iG~~~~-----------~~~~~~ae~Qa~~~a~~l~g 461 (523)
.. ...+.++.|+||++|.+.. ....+.+..|++.+|..|.|
T Consensus 301 ~v------d~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 301 KV------NEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp CC------CTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred EE------CCccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 11 1234468999999998762 12456799999999999998
No 33
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.95 E-value=1.8e-27 Score=235.54 Aligned_cols=285 Identities=12% Similarity=0.081 Sum_probs=180.7
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhH
Q 009897 26 GPKMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNK 105 (523)
Q Consensus 26 ~~~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (523)
+.|..+||+||||||+||+||.+|++.|++|+|||+. ..||.+...||+. +.. ......+
T Consensus 2 n~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~~~~~~~~--------------~~~-----~~~~~~~ 61 (304)
T 4fk1_A 2 NAMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRVTQNSHGF--------------ITR-----DGIKPEE 61 (304)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGGSSCBCCS--------------TTC-----TTBCHHH
T ss_pred CCCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCeeeeecCCc--------------cCC-----CCCCHHH
Confidence 4455689999999999999999999999999999985 5677665544321 111 1234566
Q ss_pred HHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEE
Q 009897 106 VMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVIL 185 (523)
Q Consensus 106 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVl 185 (523)
+.+...+.+.+++. ...++..+..+.... .+.++|.+.++. ++.||+|||
T Consensus 62 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---------------------~~~~~v~~~~g~-------~~~a~~lii 111 (304)
T 4fk1_A 62 FKEIGLNEVMKYPS--VHYYEKTVVMITKQS---------------------TGLFEIVTKDHT-------KYLAERVLL 111 (304)
T ss_dssp HHHHHHHHHTTSTT--EEEEECCEEEEEECT---------------------TSCEEEEETTCC-------EEEEEEEEE
T ss_pred HHHHHHHHHHhcCC--EEEEeeEEEEeeecC---------------------CCcEEEEECCCC-------EEEeCEEEE
Confidence 66666666666654 344556677776654 356888887775 899999999
Q ss_pred eeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCC-HHHHHHHHHHhcCCccCEEEEEeece
Q 009897 186 CIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKS-AVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 186 AtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~s-g~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
|||+ .|+.|++| |.+.+.+..++.....+. ..+++++++|||+|.. +.++|..+...+. .|+++.|.+.
T Consensus 112 ATGs---~p~~p~i~---G~~~~~~~~v~~~~~~~~-~~~~~~~~~VIggG~~~~~e~a~~~~~~~~---~v~i~~~~~~ 181 (304)
T 4fk1_A 112 ATGM---QEEFPSIP---NVREYYGKSLFSCPYCDG-WELKDQPLIIISENEDHTLHMTKLVYNWST---DLVIATNGNE 181 (304)
T ss_dssp CCCC---EEECCSCT---THHHHBTTTEESCHHHHS-GGGTTSCEEEECCSHHHHHHHHHHHTTTCS---CEEEECSSCC
T ss_pred ccCC---cccccccc---Cccccccceeeeccccch-hHhcCCceeeecCCCchhhhHHHHHHhCCc---eEEEEecccc
Confidence 9995 58888898 877776665655543333 3457889999998876 4677766666554 4888876543
Q ss_pred eEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcce
Q 009897 265 WMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMF 344 (523)
Q Consensus 265 ~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 344 (523)
+
T Consensus 182 ~------------------------------------------------------------------------------- 182 (304)
T 4fk1_A 182 L------------------------------------------------------------------------------- 182 (304)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred eecCcchhhhccCCCEEEEecCceEEecC-----cEEEcCCceeeeccEEEEecCCCCCccccccccchhh-hhhhcCCC
Q 009897 345 TVLPRNFYDRVQGGGLSLMKSRSFTFCKN-----GLVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYF-QKQITGSS 418 (523)
Q Consensus 345 ~~~~~~~~~~~~~g~v~v~~~~i~~~~~~-----~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l-~~~~~~~~ 418 (523)
...+.+.+++.++.++...+..+..+ +|.+.||++ +++|.+|+++|..++..+++.++...- ...+..
T Consensus 183 ---~~~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~-i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~v-- 256 (304)
T 4fk1_A 183 ---SQTIMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLR-IERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVI-- 256 (304)
T ss_dssp ---CHHHHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCE-ECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCS--
T ss_pred ---hhhhhhhhhccceeEeeeeEEEeecCCCeeeeeeccccce-eeecceeeeeccccCChhhhhcCeEECCCCCEEE--
Confidence 00111222233344444444444332 378899998 998888888877766543332222110 111111
Q ss_pred cccccccccCCCCCeEEecccCCC--CchhhHHHHHHHHHHHH
Q 009897 419 APLYREGIHPQIPQLAILGYADSP--SILRTTEMRSKCLAHFL 459 (523)
Q Consensus 419 ~~ly~~~~~~~~p~l~~iG~~~~~--~~~~~ae~Qa~~~a~~l 459 (523)
...+.++.|+||++|.+... .....|-.|++.+|..+
T Consensus 257 ----d~~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i 295 (304)
T 4fk1_A 257 ----DDFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAI 295 (304)
T ss_dssp ----STTCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred ----CcCCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHH
Confidence 12345789999999987532 23455666776665443
No 34
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.95 E-value=2.1e-28 Score=248.58 Aligned_cols=280 Identities=16% Similarity=0.197 Sum_probs=189.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEYL 110 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 110 (523)
.||+|||||++|++||..|++.| +|+|+|+++..+ |.. +.+. . .+.+ ....+++..+.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~--~~l~----~---~~~g----------~~~~~~~~~~~ 66 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSK--PMLS----H---YIAG----------FIPRNRLFPYS 66 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCS--TTHH----H---HHTT----------SSCGGGGCSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--ccc--chhH----H---HHhC----------CCCHHHhccCC
Confidence 68999999999999999999999 999999976542 111 1000 0 0000 01112222233
Q ss_pred HHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeeec
Q 009897 111 QAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRY 190 (523)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~ 190 (523)
.++.+++++ .++++++|+.+++.. +.|+ .++. ++.||+||+|||+.
T Consensus 67 ~~~~~~~~v--~~~~g~~v~~id~~~------------------------~~V~-~~g~-------~~~~d~lViATGs~ 112 (367)
T 1xhc_A 67 LDWYRKRGI--EIRLAEEAKLIDRGR------------------------KVVI-TEKG-------EVPYDTLVLATGAR 112 (367)
T ss_dssp HHHHHHHTE--EEECSCCEEEEETTT------------------------TEEE-ESSC-------EEECSEEEECCCEE
T ss_pred HHHHHhCCc--EEEECCEEEEEECCC------------------------CEEE-ECCc-------EEECCEEEECCCCC
Confidence 445567787 788888999988643 6676 5444 79999999999954
Q ss_pred CCCCCCCCCCCCCCCCCCCccEEecCCCCchhhh---c-CCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeE
Q 009897 191 SDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAEL---I-NGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWM 266 (523)
Q Consensus 191 s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~---~-~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~ 266 (523)
|+.|++| |.+ .+++.....+.... . .+++|+|||+|.+|+|+|..+++.+.+ ||++.|.+. +
T Consensus 113 ---p~~p~i~---G~~----~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~-~ 178 (367)
T 1xhc_A 113 ---AREPQIK---GKE----YLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYH---VKLIHRGAM-F 178 (367)
T ss_dssp ---ECCCCSB---TGG----GEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCE---EEEECSSSC-C
T ss_pred ---CCCCCCC---CcC----CEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCE---EEEEeCCCe-e
Confidence 7888888 622 35554443322111 1 369999999999999999999998754 999998765 2
Q ss_pred ecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceee
Q 009897 267 VPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTV 346 (523)
Q Consensus 267 ~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~ 346 (523)
+| .+ +.
T Consensus 179 l~-~~-------------------------------------------------------------------------~~ 184 (367)
T 1xhc_A 179 LG-LD-------------------------------------------------------------------------EE 184 (367)
T ss_dssp TT-CC-------------------------------------------------------------------------HH
T ss_pred cc-CC-------------------------------------------------------------------------HH
Confidence 23 11 00
Q ss_pred cCcchhhhccCCCEEEEecC-ceEEecCcEEEcCCceeeeccEEEEecCCCCCccccccccchhhhhhhcCCCccccccc
Q 009897 347 LPRNFYDRVQGGGLSLMKSR-SFTFCKNGLVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQITGSSAPLYREG 425 (523)
Q Consensus 347 ~~~~~~~~~~~g~v~v~~~~-i~~~~~~~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~~~~~ly~~~ 425 (523)
+.+.+.+.+++.+|+++.+. +.+++.++|+++||+ +++|.||+|||++|+..+++..+...-.. +.. . ..
T Consensus 185 ~~~~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~--i~~D~vi~a~G~~p~~~ll~~~gl~~~~g-i~V---d---~~ 255 (367)
T 1xhc_A 185 LSNMIKDMLEETGVKFFLNSELLEANEEGVLTNSGF--IEGKVKICAIGIVPNVDLARRSGIHTGRG-ILI---D---DN 255 (367)
T ss_dssp HHHHHHHHHHHTTEEEECSCCEEEECSSEEEETTEE--EECSCEEEECCEEECCHHHHHTTCCBSSS-EEC---C---TT
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEeeEEEECCCE--EEcCEEEECcCCCcCHHHHHhCCCCCCCC-EEE---C---CC
Confidence 11122344555678888875 888887789998885 89999999999999976543222111011 111 1 22
Q ss_pred ccCCCCCeEEecccCC-----CCchhhHHHHHHHHHHHHcCCC
Q 009897 426 IHPQIPQLAILGYADS-----PSILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 426 ~~~~~p~l~~iG~~~~-----~~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
+.++.||||++|.+.. ...++.+..|++.+|..+.|+.
T Consensus 256 ~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 298 (367)
T 1xhc_A 256 FRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGEP 298 (367)
T ss_dssp SBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTCC
T ss_pred cccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCCC
Confidence 3467899999998742 2356789999999999998853
No 35
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.95 E-value=2.5e-27 Score=250.09 Aligned_cols=296 Identities=19% Similarity=0.221 Sum_probs=192.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCC---CceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCCh
Q 009897 27 PKMERKIAIIGAGVSGLLACKYTLENG---FKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDH 103 (523)
Q Consensus 27 ~~~~~~v~IIGaG~aGl~aA~~l~~~g---~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (523)
++|.+||+|||||++|+++|..|++.| .+|+|||+++.++..+... + .. .... .. ..
T Consensus 32 ~~m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~-~---~~-------~~~~-~~--------~~ 91 (490)
T 2bc0_A 32 DRWGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGM-A---LW-------IGEQ-IA--------GP 91 (490)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGH-H---HH-------HTTS-SS--------CS
T ss_pred hccCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCcccccc-c---hh-------hcCc-cC--------CH
Confidence 456799999999999999999999988 9999999987665332210 0 00 0000 00 00
Q ss_pred hHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEE
Q 009897 104 NKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFV 183 (523)
Q Consensus 104 ~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~v 183 (523)
+++..++.+.++++++ .++++++|..++... +.+.+.. +++ ..++.||+|
T Consensus 92 ~~~~~~~~~~~~~~gv--~v~~~~~v~~i~~~~----------------------~~v~v~~-~g~-----~~~~~~d~l 141 (490)
T 2bc0_A 92 EGLFYSDKEELESLGA--KVYMESPVQSIDYDA----------------------KTVTALV-DGK-----NHVETYDKL 141 (490)
T ss_dssp GGGBSCCHHHHHHTTC--EEETTCCEEEEETTT----------------------TEEEEEE-TTE-----EEEEECSEE
T ss_pred HHhhhcCHHHHHhCCC--EEEeCCEEEEEECCC----------------------CEEEEEe-CCc-----EEEEECCEE
Confidence 1111112334456777 788899999998754 3344331 321 127899999
Q ss_pred EEeeeecCCCCCCCCCCCCCCCC------CCCc---cEEecCCCCchhh----h--cCCCEEEEEcCCCCHHHHHHHHHH
Q 009897 184 ILCIGRYSDLPNTPDFPMNKGPE------VFDG---KVLHSMNDDLAAE----L--INGKRVTVIGFQKSAVDVAAEVAN 248 (523)
Q Consensus 184 VlAtG~~s~~p~~p~~p~~~g~~------~~~g---~~~h~~~~~~~~~----~--~~~k~V~VvG~G~sg~d~a~~l~~ 248 (523)
|+|||+. |..|++| |.+ .|.+ .+++...+.+... . ..+++|+|||+|.+|+|+|..+++
T Consensus 142 viAtG~~---p~~p~i~---G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~ 215 (490)
T 2bc0_A 142 IFATGSQ---PILPPIK---GAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQR 215 (490)
T ss_dssp EECCCEE---ECCCSCB---TCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHH
T ss_pred EECCCCC---cCCCCCC---CccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHH
Confidence 9999954 7888888 665 3432 3565544333211 1 468999999999999999999999
Q ss_pred hcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCC
Q 009897 249 RNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYN 328 (523)
Q Consensus 249 ~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (523)
.+.+ ||++.|.+. ++|... +
T Consensus 216 ~g~~---Vtlv~~~~~-~l~~~~--~------------------------------------------------------ 235 (490)
T 2bc0_A 216 KGKE---VVLIDVVDT-CLAGYY--D------------------------------------------------------ 235 (490)
T ss_dssp TTCE---EEEEESSSS-TTTTTS--C------------------------------------------------------
T ss_pred CCCe---EEEEEcccc-hhhhHH--H------------------------------------------------------
Confidence 8754 999999765 222110 0
Q ss_pred CCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecCc----EEEcCCceeeeccEEEEecCCCCCccccc
Q 009897 329 MIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNG----LVIDGETTPLVTDIVIFATGYKSDEKLKN 403 (523)
Q Consensus 329 l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~----v~l~dG~~~~~~D~VI~ATG~~~~~~l~~ 403 (523)
+.+.+.+.+.+++.+|+++.+. +.+++.++ +.+ +|++ +++|.||+|||++|+.++++
T Consensus 236 ----------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~-i~~D~Vi~a~G~~p~~~ll~ 297 (490)
T 2bc0_A 236 ----------------RDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNE-YDVDMVILAVGFRPNTTLGN 297 (490)
T ss_dssp ----------------HHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCE-EECSEEEECCCEEECCGGGT
T ss_pred ----------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcE-EECCEEEECCCCCcChHHHH
Confidence 0011222345566678888775 77776543 444 7777 99999999999999987543
Q ss_pred cccchh-hhhhhcCCCcccccccccCCCCCeEEecccCCC-----------CchhhHHHHHHHHHHHHcCCC
Q 009897 404 IFKSTY-FQKQITGSSAPLYREGIHPQIPQLAILGYADSP-----------SILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 404 ~~~~~~-l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-----------~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
.. ... -+..+.. ..| +.++.|+||++|.+... .....|..|++.+|..+.|..
T Consensus 298 ~~-l~~~~~G~I~V---d~~---~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 362 (490)
T 2bc0_A 298 GK-IDLFRNGAFLV---NKR---QETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD 362 (490)
T ss_dssp TC-SCBCTTSCBCC---CTT---CBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred hh-hccCCCCCEEE---CCC---cccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 22 110 0111111 122 34589999999987652 246789999999999998864
No 36
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.95 E-value=8.4e-28 Score=253.91 Aligned_cols=312 Identities=19% Similarity=0.204 Sum_probs=186.3
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCcee-----eCCCCCCCCCCC
Q 009897 26 GPKMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFYQ-----FSDFAWPNSVTE 98 (523)
Q Consensus 26 ~~~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 98 (523)
..||.+||+|||||++|++||..|++.|++|+|||+++.+||+|.+ ++|...+..+...+. +..+.+... .
T Consensus 21 ~~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~--~ 98 (491)
T 3urh_A 21 QSMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVA--N 98 (491)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECC--C
T ss_pred hhcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccC--C
Confidence 3456799999999999999999999999999999999999999986 455443322211111 111111110 1
Q ss_pred CCCChhHHHHHH-----------HHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEee
Q 009897 99 TFPDHNKVMEYL-----------QAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQE 167 (523)
Q Consensus 99 ~~~~~~~~~~yl-----------~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 167 (523)
...+...+.++. ....++.++ .+..+. +.. .. .+.+.|...+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g~-~~~---~~---------------------~~~~~v~~~~ 151 (491)
T 3urh_A 99 PKLNLQKMMAHKDATVKSNVDGVSFLFKKNKI--DGFQGT-GKV---LG---------------------QGKVSVTNEK 151 (491)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESE-EEE---CS---------------------SSEEEEECTT
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEE-EEE---ec---------------------CCEEEEEeCC
Confidence 111223333332 223334444 333332 221 11 1335554333
Q ss_pred cccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCC-CCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHH
Q 009897 168 ARNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEV-FDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEV 246 (523)
Q Consensus 168 ~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~-~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l 246 (523)
+ +..++.||+||+|||+. | |.+| |.+. +.+..+++...... ....+++|+|||+|.+|+|+|..+
T Consensus 152 g-----~~~~~~~d~lViATGs~---p--~~ip---g~~~~~~~~~~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l 217 (491)
T 3urh_A 152 G-----EEQVLEAKNVVIATGSD---V--AGIP---GVEVAFDEKTIVSSTGALA-LEKVPASMIVVGGGVIGLELGSVW 217 (491)
T ss_dssp S-----CEEEEECSEEEECCCEE---C--CCBT---TBCCCCCSSSEECHHHHTS-CSSCCSEEEEECCSHHHHHHHHHH
T ss_pred C-----ceEEEEeCEEEEccCCC---C--CCCC---CcccccCCeeEEehhHhhh-hhhcCCeEEEECCCHHHHHHHHHH
Confidence 2 23479999999999975 3 2345 5542 34444444422111 123589999999999999999999
Q ss_pred HHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCccc
Q 009897 247 ANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKK 326 (523)
Q Consensus 247 ~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (523)
+..+.+ ||++.+.+.. ++..+
T Consensus 218 ~~~g~~---Vtlv~~~~~~-l~~~d------------------------------------------------------- 238 (491)
T 3urh_A 218 ARLGAK---VTVVEFLDTI-LGGMD------------------------------------------------------- 238 (491)
T ss_dssp HHHTCE---EEEECSSSSS-SSSSC-------------------------------------------------------
T ss_pred HHcCCE---EEEEeccccc-cccCC-------------------------------------------------------
Confidence 998764 9999987752 22221
Q ss_pred CCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC--c--EEEcC---C--ceeeeccEEEEecCCC
Q 009897 327 YNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN--G--LVIDG---E--TTPLVTDIVIFATGYK 396 (523)
Q Consensus 327 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~--~--v~l~d---G--~~~~~~D~VI~ATG~~ 396 (523)
+.+.+.+.+.+++.+|+++.+. +.+++.+ + +.+.+ | ++ +++|.||+|||++
T Consensus 239 ------------------~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 239 ------------------GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATT-LDAEVVLIATGRK 299 (491)
T ss_dssp ------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEE-EEESEEEECCCCE
T ss_pred ------------------HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEE-EEcCEEEEeeCCc
Confidence 0011122344455667777764 6666532 2 55653 5 45 8999999999999
Q ss_pred CCcccccc--ccchhhhhhhcCCCcccccccccCCCCCeEEecccCC-CCchhhHHHHHHHHHHHHcCCC
Q 009897 397 SDEKLKNI--FKSTYFQKQITGSSAPLYREGIHPQIPQLAILGYADS-PSILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 397 ~~~~l~~~--~~~~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~-~~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
|+..++.. .+.. +.+ .........+.++.|+||++|.+.. +...+.+..|++.+|..+.|+.
T Consensus 300 p~~~~l~l~~~g~~-~~~----~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 364 (491)
T 3urh_A 300 PSTDGLGLAKAGVV-LDS----RGRVEIDRHFQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQA 364 (491)
T ss_dssp ECCTTSCHHHHTCC-BCT----TSCBCCCTTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTSC
T ss_pred cCCCccCchhcCce-ECC----CCCEeECCCCCCCCCCEEEEEecCCCccchhHHHHHHHHHHHHHcCCC
Confidence 98764221 1111 010 0101111234468999999998763 4456889999999999999864
No 37
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.95 E-value=3.6e-27 Score=246.46 Aligned_cols=292 Identities=15% Similarity=0.144 Sum_probs=188.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC--CCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKV 106 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (523)
|++||+|||||++|+++|..|++. |.+|+|||+++.+|..... +. .+. .......+++
T Consensus 1 M~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~----~~--------~~~--------~~~~~~~~~~ 60 (452)
T 3oc4_A 1 MSLKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGG----LS--------AYF--------NHTINELHEA 60 (452)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC------------------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCcc----ch--------hhh--------cCCCCCHHHh
Confidence 347999999999999999999998 8999999999877621110 00 000 0000111111
Q ss_pred HHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEe
Q 009897 107 MEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILC 186 (523)
Q Consensus 107 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlA 186 (523)
..+..+..+++++ .++++++|++++... +.+.+.... ...++.||+||+|
T Consensus 61 ~~~~~~~~~~~gi--~~~~~~~V~~id~~~----------------------~~v~v~~~~------~~~~~~~d~lviA 110 (452)
T 3oc4_A 61 RYITEEELRRQKI--QLLLNREVVAMDVEN----------------------QLIAWTRKE------EQQWYSYDKLILA 110 (452)
T ss_dssp CCCCHHHHHHTTE--EEECSCEEEEEETTT----------------------TEEEEEETT------EEEEEECSEEEEC
T ss_pred hcCCHHHHHHCCC--EEEECCEEEEEECCC----------------------CEEEEEecC------ceEEEEcCEEEEC
Confidence 1123344566777 788899999998764 445554111 1237999999999
Q ss_pred eeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchh----hhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEee
Q 009897 187 IGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAA----ELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKT 262 (523)
Q Consensus 187 tG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~----~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~ 262 (523)
||+ .|..|++| |.+. ..+++...+.+.. ....+++|+|||+|.+|+|+|..+++.+.+ ||++.|.
T Consensus 111 tG~---~p~~p~i~---g~~~--~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~ 179 (452)
T 3oc4_A 111 TGA---SQFSTQIR---GSQT--EKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKT---VHVFESL 179 (452)
T ss_dssp CCC---CBCCCCCB---TTTC--TTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCc---ccCCCCCC---CCCC--CCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCe---EEEEEcc
Confidence 995 58888888 6553 2345554332211 124589999999999999999999998754 9999998
Q ss_pred ceeEecC-ccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccC
Q 009897 263 VHWMVPD-YFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISS 341 (523)
Q Consensus 263 ~~~~~p~-~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 341 (523)
+.+ +|. .+
T Consensus 180 ~~~-l~~~~d---------------------------------------------------------------------- 188 (452)
T 3oc4_A 180 ENL-LPKYFD---------------------------------------------------------------------- 188 (452)
T ss_dssp SSS-STTTCC----------------------------------------------------------------------
T ss_pred Ccc-ccccCC----------------------------------------------------------------------
Confidence 762 222 11
Q ss_pred cceeecCcchhhhccCCCEEEEecC-ceEEe--cCc--EEEcCCceeeeccEEEEecCCCCCccccccccchhhhhhhcC
Q 009897 342 CMFTVLPRNFYDRVQGGGLSLMKSR-SFTFC--KNG--LVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQITG 416 (523)
Q Consensus 342 ~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~--~~~--v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~ 416 (523)
+.+.+.+.+.+++.+|+++.+. +.+++ +++ |.+++| + +++|.||+|||++|+..+++.. .. +..
T Consensus 189 ---~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~-i~aD~Vv~A~G~~p~~~~l~~~-~~-~~~---- 257 (452)
T 3oc4_A 189 ---KEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-E-ISCDSGIFALNLHPQLAYLDKK-IQ-RNL---- 257 (452)
T ss_dssp ---HHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-E-EEESEEEECSCCBCCCSSCCTT-SC-BCT----
T ss_pred ---HHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-E-EEeCEEEECcCCCCChHHHHhh-hc-cCC----
Confidence 0011223345666778888875 77776 333 556566 6 9999999999999998654321 01 100
Q ss_pred CCcccccccccCCCCCeEEecccCCC-----------CchhhHHHHHHHHHHHHcCCC
Q 009897 417 SSAPLYREGIHPQIPQLAILGYADSP-----------SILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 417 ~~~~ly~~~~~~~~p~l~~iG~~~~~-----------~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
.........+.++.|+||++|.+... ..++.+..|++.+|..+.|..
T Consensus 258 ~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~ 315 (452)
T 3oc4_A 258 DQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKT 315 (452)
T ss_dssp TSCBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCC
T ss_pred CCCEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCC
Confidence 00011112344689999999987653 246789999999999998863
No 38
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.95 E-value=2.1e-27 Score=244.89 Aligned_cols=286 Identities=14% Similarity=0.138 Sum_probs=188.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCC--ceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhH
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGF--KPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNK 105 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~--~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (523)
++.+||+|||||++|+++|..|++.|. +|+|||+.+.++.. . +. .++.... ... ++ ..
T Consensus 5 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~--~--~~----~~~~~~~-~~~--~~---~~------ 64 (408)
T 2gqw_A 5 ALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYD--R--PP----LSKDFMA-HGD--AE---KI------ 64 (408)
T ss_dssp -CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBC--S--GG----GGTHHHH-HCC--GG---GS------
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCccc--C--CC----CCHHHhC-CCc--hh---hh------
Confidence 356899999999999999999999988 59999998755311 0 00 0000000 000 00 00
Q ss_pred HHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEE
Q 009897 106 VMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVIL 185 (523)
Q Consensus 106 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVl 185 (523)
+++ .++++++ .++++++|+.++... ++|++.++. ++.||+||+
T Consensus 65 ---~~~-~~~~~~v--~~~~~~~v~~i~~~~------------------------~~v~~~~g~-------~~~~d~lvi 107 (408)
T 2gqw_A 65 ---RLD-CKRAPEV--EWLLGVTAQSFDPQA------------------------HTVALSDGR-------TLPYGTLVL 107 (408)
T ss_dssp ---BCC-CTTSCSC--EEEETCCEEEEETTT------------------------TEEEETTSC-------EEECSEEEE
T ss_pred ---hHH-HHHHCCC--EEEcCCEEEEEECCC------------------------CEEEECCCC-------EEECCEEEE
Confidence 011 2234556 788888899988643 678876664 799999999
Q ss_pred eeeecCCCCCCCCC-CCCCCCCCCCccEEecCCCCchhh----hcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEE
Q 009897 186 CIGRYSDLPNTPDF-PMNKGPEVFDGKVLHSMNDDLAAE----LINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLF 260 (523)
Q Consensus 186 AtG~~s~~p~~p~~-p~~~g~~~~~g~~~h~~~~~~~~~----~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~ 260 (523)
|||+. |..|++ | |.+ . .+.+.....+... ...+++|+|||+|.+|+|+|..+++.+.+ ||++.
T Consensus 108 AtG~~---~~~~~i~~---G~~--~-~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~ 175 (408)
T 2gqw_A 108 ATGAA---PRALPTLQ---GAT--M-PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVH---VSLVE 175 (408)
T ss_dssp CCCEE---ECCCGGGT---TCS--S-CEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEE
T ss_pred CCCCC---CCCCCccC---CCC--C-cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCE---EEEEE
Confidence 99964 788888 8 765 2 2444333222111 12489999999999999999999998754 99999
Q ss_pred eeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCccccccc
Q 009897 261 KTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQIS 340 (523)
Q Consensus 261 r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 340 (523)
+.+. ++|... +
T Consensus 176 ~~~~-~l~~~~--~------------------------------------------------------------------ 186 (408)
T 2gqw_A 176 TQPR-LMSRAA--P------------------------------------------------------------------ 186 (408)
T ss_dssp SSSS-SSTTTS--C------------------------------------------------------------------
T ss_pred eCCc-cccccc--C------------------------------------------------------------------
Confidence 9765 223210 0
Q ss_pred CcceeecCcchhhhccCCCEEEEecC-ceEEecCcEEEcCCceeeeccEEEEecCCCCCccccccccchhhhhhhcCCCc
Q 009897 341 SCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNGLVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQITGSSA 419 (523)
Q Consensus 341 ~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~~~~ 419 (523)
+.+...+.+.+++.+|+++.+. +.+++++.|+++||++ +++|.||+|||++|+..+++..+...-.. +..
T Consensus 187 ----~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~-i~~D~vi~a~G~~p~~~l~~~~gl~~~~g-i~V--- 257 (408)
T 2gqw_A 187 ----ATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTR-IAADMVVVGIGVLANDALARAAGLACDDG-IFV--- 257 (408)
T ss_dssp ----HHHHHHHHHHHHHTTCEEEESCCEEEEETTEEEETTSCE-EECSEEEECSCEEECCHHHHHHTCCBSSS-EEC---
T ss_pred ----HHHHHHHHHHHHHcCcEEEeCCEEEEEECCEEEECCCCE-EEcCEEEECcCCCccHHHHHhCCCCCCCC-EEE---
Confidence 0011122234455667888774 7777745788999988 99999999999999876543222111111 111
Q ss_pred ccccccccCCCCCeEEecccCCCC-----------chhhHHHHHHHHHHHHcCCC
Q 009897 420 PLYREGIHPQIPQLAILGYADSPS-----------ILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 420 ~ly~~~~~~~~p~l~~iG~~~~~~-----------~~~~ae~Qa~~~a~~l~g~~ 463 (523)
...+.++.|+||++|.+.... .+..+..|++.+|..+.|+.
T Consensus 258 ---d~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 309 (408)
T 2gqw_A 258 ---DAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPT 309 (408)
T ss_dssp ---CTTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTT
T ss_pred ---CCCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCC
Confidence 122346889999999865432 35689999999999998864
No 39
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.95 E-value=1.2e-26 Score=230.39 Aligned_cols=180 Identities=17% Similarity=0.267 Sum_probs=129.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc-ccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ-TIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
+||+||||||+|++||..|++.|++|+|||+. ..||.+.. +.+. ......+..+ ....+..++.++
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~-~~gg~~~~G~~~~-----~~~i~~~~g~-------~~~i~~~~l~~~ 71 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGF-MAGGVAAGGQLTT-----TTIIENFPGF-------PNGIDGNELMMN 71 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCS-SGGGCCTTCGGGG-----SSEECCSTTC-------TTCEEHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCcccCCCcCC-----hHHhhhccCC-------cccCCHHHHHHH
Confidence 79999999999999999999999999999985 45555443 1111 1111122221 122456788899
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+++++++. .+.. .+|..+.... ..+.+.+.++. ++.||+||+|||+
T Consensus 72 ~~~~~~~~~~--~~~~-~~v~~~~~~~----------------------~~~~~~~~~~~-------~~~~~~liiATG~ 119 (314)
T 4a5l_A 72 MRTQSEKYGT--TIIT-ETIDHVDFST----------------------QPFKLFTEEGK-------EVLTKSVIIATGA 119 (314)
T ss_dssp HHHHHHHTTC--EEEC-CCEEEEECSS----------------------SSEEEEETTCC-------EEEEEEEEECCCE
T ss_pred HHHHHhhcCc--EEEE-eEEEEeecCC----------------------CceEEEECCCe-------EEEEeEEEEcccc
Confidence 9999998886 4444 4565555543 34556655554 8999999999996
Q ss_pred cCCCCCCCCCCCCCCCCCCCccEEecCCCCch-hhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 190 YSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLA-AELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 190 ~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~-~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
. |+.|++| |.+.+.+..++...+... ...+.+++|+|||+|.+|+|+|..+++.+.+ ||++.|.+.
T Consensus 120 ~---~~~~~ip---G~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~---Vt~v~~~~~ 186 (314)
T 4a5l_A 120 T---AKRMHVP---GEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSK---VIILHRRDA 186 (314)
T ss_dssp E---ECCCCCT---THHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSE---EEEECSSSS
T ss_pred c---ccccCCC---ccccccccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCe---eeeeccccc
Confidence 4 7888888 877665555665543221 1235789999999999999999999998865 999998654
No 40
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.95 E-value=2.4e-27 Score=252.00 Aligned_cols=308 Identities=18% Similarity=0.234 Sum_probs=200.4
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCce----eeCCCC-CCCCCCC
Q 009897 26 GPKMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFY----QFSDFA-WPNSVTE 98 (523)
Q Consensus 26 ~~~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~----~~~~~~-~~~~~~~ 98 (523)
.++..+||+|||||++|+++|..|++.|.+|+|||+++.+||+|.+ +.|...+..+...+ .+..+. ++.. ..
T Consensus 39 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~-~~ 117 (523)
T 1mo9_A 39 NDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDM-TE 117 (523)
T ss_dssp TCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCC-TT
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHH-Hh
Confidence 3445689999999999999999999999999999999889999875 23332221111000 011111 2211 22
Q ss_pred CCCChhHHHHHHHH-------HH-----HHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEe
Q 009897 99 TFPDHNKVMEYLQA-------YA-----AHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQ 166 (523)
Q Consensus 99 ~~~~~~~~~~yl~~-------~~-----~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 166 (523)
.+++.+++.+++.. +. ++.++ .+.++.+|..++. +.|.+.
T Consensus 118 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv--~~~~~~~v~~i~~--------------------------~~v~~~ 169 (523)
T 1mo9_A 118 KVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNL--EYILNCPAKVIDN--------------------------HTVEAA 169 (523)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCC--CEEESSCCEEEET--------------------------TEEEET
T ss_pred hhhhHHHHHHHHHhhhhhhhhhhhhcccccCCc--EEEEeeEEEEeeC--------------------------CEEEEC
Confidence 34457777777753 33 55566 5665667776653 245554
Q ss_pred ecccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCC-chhhhcCCCEEEEEcCCCCHHHHHHH
Q 009897 167 EARNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDD-LAAELINGKRVTVIGFQKSAVDVAAE 245 (523)
Q Consensus 167 ~~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~-~~~~~~~~k~V~VvG~G~sg~d~a~~ 245 (523)
+. .+.||+||+|||+. |..|++| |.+.. .++++.++. .. ....+++|+|||+|.+|+|+|..
T Consensus 170 -g~-------~~~~d~lViATGs~---p~~p~i~---G~~~~--~v~~~~~~~~~l-~~~~g~~vvViGgG~~g~E~A~~ 232 (523)
T 1mo9_A 170 -GK-------VFKAKNLILAVGAG---PGTLDVP---GVNAK--GVFDHATLVEEL-DYEPGSTVVVVGGSKTAVEYGCF 232 (523)
T ss_dssp -TE-------EEEBSCEEECCCEE---CCCCCST---TTTSB--TEEEHHHHHHHC-CSCCCSEEEEECCSHHHHHHHHH
T ss_pred -CE-------EEEeCEEEECCCCC---CCCCCCC---CcccC--cEeeHHHHHHHH-HhcCCCeEEEECCCHHHHHHHHH
Confidence 33 78999999999964 7888888 76531 255554433 21 12334999999999999999999
Q ss_pred HHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcc
Q 009897 246 VANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLK 325 (523)
Q Consensus 246 l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (523)
+++.+.+ ||++.+.+. ++|..+ .
T Consensus 233 l~~~G~~---Vtlv~~~~~-~l~~~~-----------------------------------~------------------ 255 (523)
T 1mo9_A 233 FNATGRR---TVMLVRTEP-LKLIKD-----------------------------------N------------------ 255 (523)
T ss_dssp HHHTTCE---EEEECSSCT-TTTCCS-----------------------------------H------------------
T ss_pred HHHcCCe---EEEEEecCc-cccccc-----------------------------------H------------------
Confidence 9998754 999998765 222211 0
Q ss_pred cCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEec--Cc------EEEcCCc-eeeeccEEEEecCC
Q 009897 326 KYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCK--NG------LVIDGET-TPLVTDIVIFATGY 395 (523)
Q Consensus 326 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~--~~------v~l~dG~-~~~~~D~VI~ATG~ 395 (523)
.+...+.+.+++.+|+++.+. +.++.. ++ |++++|+ + +++|.||+|||+
T Consensus 256 --------------------~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~-i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 256 --------------------ETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMR-IETDFVFLGLGE 314 (523)
T ss_dssp --------------------HHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEE-EECSCEEECCCC
T ss_pred --------------------HHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEE-EEcCEEEECcCC
Confidence 011122234445567777764 666654 33 5667887 6 999999999999
Q ss_pred CCCcc-ccccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCCC-CchhhHHHHHHHHHHHHcCCC
Q 009897 396 KSDEK-LKNIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADSP-SILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 396 ~~~~~-l~~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
+|+.. +++..+...- +..+.. . ..+.++.|+||++|.+... ...+.+..|++.+|..+.|+.
T Consensus 315 ~p~~~~~l~~~gl~~~~~G~i~V---d---~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 379 (523)
T 1mo9_A 315 QPRSAELAKILGLDLGPKGEVLV---N---EYLQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGEK 379 (523)
T ss_dssp EECCHHHHHHHTCCBCTTSCBCC---C---TTSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTTCC
T ss_pred ccCCccCHHHcCCccCCCCCEEE---C---CCCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCC
Confidence 99976 3332221110 111111 1 2234589999999988764 456789999999999998853
No 41
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.95 E-value=5.5e-27 Score=243.61 Aligned_cols=296 Identities=14% Similarity=0.145 Sum_probs=192.9
Q ss_pred cEEEECCChHHHHHHHHHHHCC--CceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 32 KIAIIGAGVSGLLACKYTLENG--FKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 32 ~v~IIGaG~aGl~aA~~l~~~g--~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
+|+|||||++|++||..|++.| .+|+|||+++..++.... .|.. +....... ...... .
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~-l~~~----------~~~~~~~~--~~~~~~------~ 62 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCA-LPYV----------IGEVVEDR--RYALAY------T 62 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGG-HHHH----------HTTSSCCG--GGTBCC------C
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcch-hHHH----------HcCCccch--hhhhhc------C
Confidence 6999999999999999999987 479999998765322110 0000 00000000 000111 1
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
.+.+.+++++ .++.+++|+.++... ..+++.... +++...+.||+||||||+
T Consensus 63 ~~~~~~~~~i--~~~~~~~V~~id~~~------------------------~~~~~~~~~--~~~~~~~~yd~lVIATGs 114 (437)
T 4eqs_A 63 PEKFYDRKQI--TVKTYHEVIAINDER------------------------QTVSVLNRK--TNEQFEESYDKLILSPGA 114 (437)
T ss_dssp HHHHHHHHCC--EEEETEEEEEEETTT------------------------TEEEEEETT--TTEEEEEECSEEEECCCE
T ss_pred HHHHHHhcCC--EEEeCCeEEEEEccC------------------------cEEEEEecc--CCceEEEEcCEEEECCCC
Confidence 1344567788 788999999998754 334444432 223447899999999996
Q ss_pred cCCCCCCCCCCCCCCCCCCCccEEecCCC-CchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEec
Q 009897 190 YSDLPNTPDFPMNKGPEVFDGKVLHSMND-DLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVP 268 (523)
Q Consensus 190 ~s~~p~~p~~p~~~g~~~~~g~~~h~~~~-~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p 268 (523)
. |+.|++| |...|..+.+..... ........+++|+|||+|.+|+|+|..+++.+.+ ||++.|.+. ++|
T Consensus 115 ~---p~~p~i~---g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~-ll~ 184 (437)
T 4eqs_A 115 S---ANSLGFE---SDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLH---PTLIHRSDK-INK 184 (437)
T ss_dssp E---ECCCCCC---CTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCE---EEEEESSSC-CST
T ss_pred c---ccccccc---CceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCc---ceeeeeecc-ccc
Confidence 4 7888777 654443221111110 0011123578999999999999999999999865 999999875 233
Q ss_pred CccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecC
Q 009897 269 DYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLP 348 (523)
Q Consensus 269 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~ 348 (523)
..+ +.+.
T Consensus 185 ~~d-------------------------------------------------------------------------~~~~ 191 (437)
T 4eqs_A 185 LMD-------------------------------------------------------------------------ADMN 191 (437)
T ss_dssp TSC-------------------------------------------------------------------------GGGG
T ss_pred ccc-------------------------------------------------------------------------chhH
Confidence 221 0122
Q ss_pred cchhhhccCCCEEEEecC-ceEEecCcEEEcCCceeeeccEEEEecCCCCCccccccccchhh-hhhhcCCCcccccccc
Q 009897 349 RNFYDRVQGGGLSLMKSR-SFTFCKNGLVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYF-QKQITGSSAPLYREGI 426 (523)
Q Consensus 349 ~~~~~~~~~g~v~v~~~~-i~~~~~~~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l-~~~~~~~~~~ly~~~~ 426 (523)
+.+.+.+++.+|+++.+. +.+++++.+++++|++ +++|.||+|+|.+|+..+++..+...- +..+.. ...+
T Consensus 192 ~~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~-~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~v------d~~~ 264 (437)
T 4eqs_A 192 QPILDELDKREIPYRLNEEINAINGNEITFKSGKV-EHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPV------NDKF 264 (437)
T ss_dssp HHHHHHHHHTTCCEEESCCEEEEETTEEEETTSCE-EECSEEEECCCEEESCGGGTTSSCCCCTTSCEEC------CTTC
T ss_pred HHHHHHhhccceEEEeccEEEEecCCeeeecCCeE-EeeeeEEEEeceecCcHHHHhhhhhhccCCcEec------CCCc
Confidence 233345555667787775 8889999999999999 999999999999999765543222110 111111 1234
Q ss_pred cCCCCCeEEecccCCC-----------CchhhHHHHHHHHHHHHcCCCC
Q 009897 427 HPQIPQLAILGYADSP-----------SILRTTEMRSKCLAHFLAGNSN 464 (523)
Q Consensus 427 ~~~~p~l~~iG~~~~~-----------~~~~~ae~Qa~~~a~~l~g~~~ 464 (523)
.++.||||++|.+... ...+.+..|++.+|..|.|+..
T Consensus 265 ~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~ 313 (437)
T 4eqs_A 265 ETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDT 313 (437)
T ss_dssp BCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTT
T ss_pred cCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCC
Confidence 5689999999986431 2356799999999999998743
No 42
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.94 E-value=3.8e-28 Score=254.82 Aligned_cols=295 Identities=14% Similarity=0.113 Sum_probs=182.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCce----eeCCCCCCCCCCCCCCCh
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFY----QFSDFAWPNSVTETFPDH 103 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 103 (523)
.+||+|||||++|+++|..|++.|++|+|||+++.+||+|.+ +.|+..+..+...+ .+... ....+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~-------~~~~~~ 76 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANV-------KIPLDF 76 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCS-------CCCCCH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccC-------CCCcCH
Confidence 479999999999999999999999999999999999999986 33433221111100 01111 111223
Q ss_pred hHHHHHHHH------------HHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccC
Q 009897 104 NKVMEYLQA------------YAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNV 171 (523)
Q Consensus 104 ~~~~~yl~~------------~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 171 (523)
..+..+... ..++.++ .+..+ ++..++. ..+.|...++.
T Consensus 77 ~~~~~~~~~~~~l~~~~~~~~~~~~~~v--~~~~g-~v~~id~------------------------~~~~V~~~~g~-- 127 (466)
T 3l8k_A 77 STVQDRKDYVQELRFKQHKRNMSQYETL--TFYKG-YVKIKDP------------------------THVIVKTDEGK-- 127 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCTTE--EEESE-EEEEEET------------------------TEEEEEETTSC--
T ss_pred HHHHHHHHhheeccccchHHHHHHhCCC--EEEEe-EEEEecC------------------------CeEEEEcCCCc--
Confidence 333333322 2222233 33333 5665553 34777665543
Q ss_pred CcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCC---chhhhcCCCEEEEEcCCCCHHHHHHHHHH
Q 009897 172 SSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDD---LAAELINGKRVTVIGFQKSAVDVAAEVAN 248 (523)
Q Consensus 172 ~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~---~~~~~~~~k~V~VvG~G~sg~d~a~~l~~ 248 (523)
..++.||+||+|||+ .|..|++| |.+. ++++.++. .. ....+++|+|||+|.+|+|+|..+++
T Consensus 128 ---~~~~~~d~lviAtG~---~p~~p~i~---G~~~----~~t~~~~~~~~~~-l~~~~~~vvViGgG~~g~e~A~~l~~ 193 (466)
T 3l8k_A 128 ---EIEAETRYMIIASGA---ETAKLRLP---GVEY----CLTSDDIFGYKTS-FRKLPQDMVIIGAGYIGLEIASIFRL 193 (466)
T ss_dssp ---EEEEEEEEEEECCCE---EECCCCCT---TGGG----SBCHHHHHSTTCS-CCSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred ---EEEEecCEEEECCCC---CccCCCCC---Cccc----eEeHHHHHHHHHH-HhhCCCeEEEECCCHHHHHHHHHHHH
Confidence 123999999999996 47888888 7652 23332221 01 11247999999999999999999999
Q ss_pred hcCCccCEEEEEeeceeEecCc-cCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccC
Q 009897 249 RNGVRYPCTLLFKTVHWMVPDY-FLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKY 327 (523)
Q Consensus 249 ~~~~~~~Vt~~~r~~~~~~p~~-~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (523)
.+.+ ||++.|.+.. +|.. + . ...+.
T Consensus 194 ~g~~---Vtlv~~~~~~-l~~~~d-----------------------------------~-~~~~~-------------- 219 (466)
T 3l8k_A 194 MGVQ---THIIEMLDRA-LITLED-----------------------------------Q-DIVNT-------------- 219 (466)
T ss_dssp TTCE---EEEECSSSSS-CTTSCC-----------------------------------H-HHHHH--------------
T ss_pred cCCE---EEEEEeCCcC-CCCCCC-----------------------------------H-HHHHH--------------
Confidence 8754 9999997752 2322 1 0 00000
Q ss_pred CCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEec---Cc--EEEc--CCc--eeeeccEEEEecCCCC
Q 009897 328 NMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCK---NG--LVID--GET--TPLVTDIVIFATGYKS 397 (523)
Q Consensus 328 ~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~---~~--v~l~--dG~--~~~~~D~VI~ATG~~~ 397 (523)
+.+.++ |+++.+. +.++++ ++ +.++ +|+ + +++|.||+|||++|
T Consensus 220 -----------------------l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~-i~~D~vi~a~G~~p 272 (466)
T 3l8k_A 220 -----------------------LLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKS-IFTNSVVLAAGRRP 272 (466)
T ss_dssp -----------------------HHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEE-EEESCEEECCCEEE
T ss_pred -----------------------HHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEE-EEcCEEEECcCCCc
Confidence 111111 4455543 555544 33 5666 676 5 89999999999999
Q ss_pred Cccc-cccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCC-CCchhhHHHHHHHHHHHHcCC
Q 009897 398 DEKL-KNIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADS-PSILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 398 ~~~l-~~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~-~~~~~~ae~Qa~~~a~~l~g~ 462 (523)
+..+ ++..+...- +. +. ....+.++.|+||++|.+.. +...+.+..|++.+|..+.|.
T Consensus 273 ~~~l~l~~~gl~~~~~G-i~------vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 273 VIPEGAREIGLSISKTG-IV------VDETMKTNIPNVFATGDANGLAPYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp CCCTTTGGGTCCBCSSS-BC------CCTTCBCSSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTT
T ss_pred ccccchhhcCceeCCCC-Ee------ECCCccCCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCC
Confidence 8762 221211100 11 11 11334468999999998876 345688999999999999875
No 43
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.94 E-value=1.3e-26 Score=242.17 Aligned_cols=288 Identities=16% Similarity=0.235 Sum_probs=184.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVM 107 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (523)
.+||+|||||++|+++|..|++. |.+|+|||+.+.+++.... .|.. .......+++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~------------------~p~~---~~~~~~~~~~~ 61 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCG------------------IPYV---VEGLSTPDKLM 61 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcC------------------Cccc---cCCCCCHHHhh
Confidence 47999999999999999999997 7899999998766422110 0000 01111222333
Q ss_pred HH-HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEe
Q 009897 108 EY-LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILC 186 (523)
Q Consensus 108 ~y-l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlA 186 (523)
.+ .+.+++++++ .++++++|+.++... +.|.+.++ ...+.||+||+|
T Consensus 62 ~~~~~~~~~~~gi--~v~~~~~v~~i~~~~------------------------~~v~~~~g------~~~~~~d~lviA 109 (449)
T 3kd9_A 62 YYPPEVFIKKRGI--DLHLNAEVIEVDTGY------------------------VRVRENGG------EKSYEWDYLVFA 109 (449)
T ss_dssp ----CTHHHHTTC--EEETTCEEEEECSSE------------------------EEEECSSS------EEEEECSEEEEC
T ss_pred hcCHHHHHHhcCc--EEEecCEEEEEecCC------------------------CEEEECCc------eEEEEcCEEEEC
Confidence 33 3445578888 899999999887543 66765433 137899999999
Q ss_pred eeecCCCCCCCCCCCCCCCCCCCccEEecCCCCch------hhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEE
Q 009897 187 IGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLA------AELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLF 260 (523)
Q Consensus 187 tG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~------~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~ 260 (523)
||.. |+.|++| |.+.. .++......+. ...+.+++|+|||+|.+|+|+|..++..+.+ ||++.
T Consensus 110 tG~~---p~~p~i~---G~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~ 178 (449)
T 3kd9_A 110 NGAS---PQVPAIE---GVNLK--GVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKN---VTMIV 178 (449)
T ss_dssp CCEE---ECCCSCB---TTTST--TEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEE
T ss_pred CCCC---CCCCCCC---CCCCC--CEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCe---EEEEE
Confidence 9954 7888888 65431 13322222111 0112689999999999999999999998754 99999
Q ss_pred eeceeEecC-ccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccc
Q 009897 261 KTVHWMVPD-YFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQI 339 (523)
Q Consensus 261 r~~~~~~p~-~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 339 (523)
|.+.+ ++. .+
T Consensus 179 ~~~~~-l~~~~~-------------------------------------------------------------------- 189 (449)
T 3kd9_A 179 RGERV-LRRSFD-------------------------------------------------------------------- 189 (449)
T ss_dssp SSSST-TTTTSC--------------------------------------------------------------------
T ss_pred cCCcc-chhhcC--------------------------------------------------------------------
Confidence 98752 222 11
Q ss_pred cCcceeecCcchhhhccCCCEEEEecC-ceEEecCc---EEEcCCceeeeccEEEEecCCCCCccccccccchhhh-hhh
Q 009897 340 SSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNG---LVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQ-KQI 414 (523)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~---v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~-~~~ 414 (523)
+.+.+.+.+.+++. |+++.+. +.+++.++ .++.+|++ +++|.||+|||++|+..+++.++...-+ ..+
T Consensus 190 -----~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~-i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i 262 (449)
T 3kd9_A 190 -----KEVTDILEEKLKKH-VNLRLQEITMKIEGEERVEKVVTDAGE-YKAELVILATGIKPNIELAKQLGVRIGETGAI 262 (449)
T ss_dssp -----HHHHHHHHHHHTTT-SEEEESCCEEEEECSSSCCEEEETTEE-EECSEEEECSCEEECCHHHHHTTCCBCTTSSB
T ss_pred -----HHHHHHHHHHHHhC-cEEEeCCeEEEEeccCcEEEEEeCCCE-EECCEEEEeeCCccCHHHHHhCCccCCCCCCE
Confidence 00111222344445 6776664 66776543 45678887 9999999999999987654322221101 111
Q ss_pred cCCCcccccccccCCCCCeEEecccCC-----------CCchhhHHHHHHHHHHHHcCCC
Q 009897 415 TGSSAPLYREGIHPQIPQLAILGYADS-----------PSILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 415 ~~~~~~ly~~~~~~~~p~l~~iG~~~~-----------~~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
.. ...+.++.|+||++|.+.. ....+.+..|++.+|..+.|+.
T Consensus 263 ~v------d~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~ 316 (449)
T 3kd9_A 263 WT------NEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKE 316 (449)
T ss_dssp CC------CTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred EE------CCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCC
Confidence 11 1234468999999998753 1345789999999999999864
No 44
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.94 E-value=5.4e-27 Score=252.23 Aligned_cols=295 Identities=18% Similarity=0.168 Sum_probs=191.8
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
++|+|||||++|+++|..|++. +.+|+|||+++.++.... ..|. .+. ....+....+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~-~l~~----------~~~--------~~~~~~~~~~~~ 62 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANC-GLPY----------HIS--------GEIAQRSALVLQ 62 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG-GHHH----------HHT--------SSSCCGGGGBCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccccc-CchH----------Hhc--------CCcCChHHhhcc
Confidence 6899999999999999999997 789999999887641100 0000 000 011123344566
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
+++.+++++++ .++++++|++++... +. +++.+.. +++..++.||+||+|||
T Consensus 63 ~~~~~~~~~~i--~~~~~~~V~~id~~~----------------------~~--v~~~~~~--~g~~~~~~~d~lviAtG 114 (565)
T 3ntd_A 63 TPESFKARFNV--EVRVKHEVVAIDRAA----------------------KL--VTVRRLL--DGSEYQESYDTLLLSPG 114 (565)
T ss_dssp CHHHHHHHHCC--EEETTEEEEEEETTT----------------------TE--EEEEETT--TCCEEEEECSEEEECCC
T ss_pred CHHHHHHhcCc--EEEECCEEEEEECCC----------------------CE--EEEEecC--CCCeEEEECCEEEECCC
Confidence 77888888998 788999999998754 33 4443311 11234789999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCccEEecCCCCchh------hhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEee
Q 009897 189 RYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAA------ELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKT 262 (523)
Q Consensus 189 ~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~------~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~ 262 (523)
+. |..|++| |.+.. .+.+.....+.. ....+++|+|||+|.+|+|+|..+++.+.+ ||++.|.
T Consensus 115 ~~---p~~p~ip---G~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~ 183 (565)
T 3ntd_A 115 AA---PIVPPIP---GVDNP--LTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIK---TTLLELA 183 (565)
T ss_dssp EE---ECCCCCT---TCCST--TEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CC---CCCCCCC---CCCCC--CEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCc---EEEEEcC
Confidence 64 7888888 76532 233333322211 124588999999999999999999998754 9999998
Q ss_pred ceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCc
Q 009897 263 VHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSC 342 (523)
Q Consensus 263 ~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 342 (523)
+. ++|..+ ..
T Consensus 184 ~~-~l~~~~-----------------------------------~~---------------------------------- 193 (565)
T 3ntd_A 184 DQ-VMTPVD-----------------------------------RE---------------------------------- 193 (565)
T ss_dssp SS-SCTTSC-----------------------------------HH----------------------------------
T ss_pred Cc-cchhcC-----------------------------------HH----------------------------------
Confidence 75 333221 00
Q ss_pred ceeecCcchhhhccCCCEEEEecC-ceEEec--------------------C---cEEEcCCceeeeccEEEEecCCCCC
Q 009897 343 MFTVLPRNFYDRVQGGGLSLMKSR-SFTFCK--------------------N---GLVIDGETTPLVTDIVIFATGYKSD 398 (523)
Q Consensus 343 ~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~--------------------~---~v~l~dG~~~~~~D~VI~ATG~~~~ 398 (523)
+...+.+.+++.+|+++.+. +.+++. + .+++++|++ +++|.||+|||++|+
T Consensus 194 ----~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~-i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 194 ----MAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGEL-LETDLLIMAIGVRPE 268 (565)
T ss_dssp ----HHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCE-EEESEEEECSCEEEC
T ss_pred ----HHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCE-EEcCEEEECcCCccc
Confidence 00111223334456666553 555543 1 266788888 999999999999998
Q ss_pred ccccccccchhhhhhhcCCCcccccccccCCCCCeEEecccCC-------C----CchhhHHHHHHHHHHHHcCCC
Q 009897 399 EKLKNIFKSTYFQKQITGSSAPLYREGIHPQIPQLAILGYADS-------P----SILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 399 ~~l~~~~~~~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~-------~----~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
..+.+..+.. +.. .........+.++.|+||++|.+.. . ..++.|..|++.+|..|.|+.
T Consensus 269 ~~l~~~~g~~-~~~----~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 339 (565)
T 3ntd_A 269 TQLARDAGLA-IGE----LGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGRE 339 (565)
T ss_dssp CHHHHHHTCC-BCT----TSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHhCCcc-cCC----CCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 7653322111 110 0011111234568999999998752 1 135689999999999999864
No 45
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.94 E-value=3.3e-27 Score=249.19 Aligned_cols=306 Identities=18% Similarity=0.244 Sum_probs=192.8
Q ss_pred CCcEEEECCChHHHHHHHHHHH-CCCceEEEc--------cCCCCCccccc--ccCcccccCCcCc----eeeCCCCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLE-NGFKPIVFE--------ARSGIGGVWSQ--TIESTKLQTPKSF----YQFSDFAWPN 94 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~-~g~~v~v~e--------~~~~~GG~w~~--~~~~~~~~~~~~~----~~~~~~~~~~ 94 (523)
.+||+|||||++|+++|..|++ .|.+|+||| +...+||+|.. ++|+..+...... ..+..+.+..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 4899999999999999999999 999999999 35789999986 4454332211111 0112222211
Q ss_pred CCCCC--CCChhHHHHHHHHHHH-----------Hh-CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCC
Q 009897 95 SVTET--FPDHNKVMEYLQAYAA-----------HF-NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGK 160 (523)
Q Consensus 95 ~~~~~--~~~~~~~~~yl~~~~~-----------~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (523)
. .. ..+..++.++.+++.+ +. ++ .+..+ ++..++.
T Consensus 87 ~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv--~~~~g-~~~~i~~-------------------------- 135 (495)
T 2wpf_A 87 D--GSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGL--DFFLG-WGSLESK-------------------------- 135 (495)
T ss_dssp C--GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTE--EEEES-EEEEEET--------------------------
T ss_pred C--CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCe--EEEEe-EEEEeeC--------------------------
Confidence 0 01 2234555555544433 33 44 44444 3444421
Q ss_pred eEEEEeecccC-CcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCH
Q 009897 161 WNVTVQEARNV-SSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSA 239 (523)
Q Consensus 161 ~~v~~~~~~~~-~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg 239 (523)
++|++.+..+. ......+.||+||+|||+. |..|++| |.+ .++++.++... ...+++|+|||+|.+|
T Consensus 136 ~~v~v~~~~~~~~~~~~~~~~d~lViATGs~---p~~p~i~---G~~----~~~~~~~~~~~--~~~~~~vvViGgG~ig 203 (495)
T 2wpf_A 136 NVVVVRETADPKSAVKERLQADHILLATGSW---PQMPAIP---GIE----HCISSNEAFYL--PEPPRRVLTVGGGFIS 203 (495)
T ss_dssp TEEEEESSSSTTSCEEEEEEEEEEEECCCEE---ECCCCCT---TGG----GCEEHHHHTTC--SSCCSEEEEECSSHHH
T ss_pred CEEEEeecCCccCCCCeEEEcCEEEEeCCCC---cCCCCCC---Ccc----ccccHHHHHhh--hhcCCeEEEECCCHHH
Confidence 45666521100 0001279999999999964 7788888 763 24455443332 1247899999999999
Q ss_pred HHHHHHHHHh---cCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHH
Q 009897 240 VDVAAEVANR---NGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVES 316 (523)
Q Consensus 240 ~d~a~~l~~~---~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (523)
+|+|..+++. +. +||++.|.+. ++|..+
T Consensus 204 ~E~A~~l~~~~~~g~---~Vtlv~~~~~-~l~~~d--------------------------------------------- 234 (495)
T 2wpf_A 204 VEFAGIFNAYKPPGG---KVTLCYRNNL-ILRGFD--------------------------------------------- 234 (495)
T ss_dssp HHHHHHHHHHCCTTC---EEEEEESSSS-SCTTSC---------------------------------------------
T ss_pred HHHHHHHHhhCCCCC---eEEEEEcCCc-cccccC---------------------------------------------
Confidence 9999999998 65 4999999775 333321
Q ss_pred HHHhcCCcccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC-----cEEEcCCceeeeccEEE
Q 009897 317 CLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN-----GLVIDGETTPLVTDIVI 390 (523)
Q Consensus 317 ~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~-----~v~l~dG~~~~~~D~VI 390 (523)
+.+...+.+.+++.+|+++.+. +.+++.+ .|+++||++ +++|.||
T Consensus 235 ----------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~-i~~D~vv 285 (495)
T 2wpf_A 235 ----------------------------ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKT-LDVDVVM 285 (495)
T ss_dssp ----------------------------HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCE-EEESEEE
T ss_pred ----------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcE-EEcCEEE
Confidence 0011122234455667887774 7777643 377889987 9999999
Q ss_pred EecCCCCCcccc--ccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCCC-CchhhHHHHHHHHHHHHcCC
Q 009897 391 FATGYKSDEKLK--NIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADSP-SILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 391 ~ATG~~~~~~l~--~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-~~~~~ae~Qa~~~a~~l~g~ 462 (523)
+|||++|+...+ +..+...- +..+.. . ..+.++.|+||++|.+... ...+.+..|++.+|..+.|.
T Consensus 286 ~a~G~~p~~~~L~l~~~gl~~~~~G~i~V---d---~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 355 (495)
T 2wpf_A 286 MAIGRIPRTNDLQLGNVGVKLTPKGGVQV---D---EFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGN 355 (495)
T ss_dssp ECSCEEECCGGGTGGGTTCCBCTTSSBCC---C---TTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred ECCCCcccccccchhhcCccCCCCCCEEE---C---CCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 999999987522 21111100 111111 1 2234588999999988753 35678999999999999874
No 46
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.94 E-value=1.7e-27 Score=250.46 Aligned_cols=308 Identities=15% Similarity=0.164 Sum_probs=192.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCce------eeCCCCCCCCCCCC
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFY------QFSDFAWPNSVTET 99 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 99 (523)
++.+||+|||||++|+++|..|++.|++|+|||+++.+||+|.. +.|+..+......+ .+..+.++.. ..
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~--~~ 81 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS--EV 81 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES--CE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC--CC
Confidence 35589999999999999999999999999999999899999976 33432221110000 1111111100 00
Q ss_pred CCChhHHHH-----------HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeec
Q 009897 100 FPDHNKVME-----------YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEA 168 (523)
Q Consensus 100 ~~~~~~~~~-----------yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 168 (523)
..+...+.. .+..+.++.++ .++.++. ..++. +.+.|.+.++
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~-~~~~~------------------------~~~~v~~~~g 134 (474)
T 1zmd_A 82 RLNLDKMMEQKSTAVKALTGGIAHLFKQNKV--VHVNGYG-KITGK------------------------NQVTATKADG 134 (474)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESEE-EEEET------------------------TEEEEECTTS
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEE-EEecC------------------------CEEEEEecCC
Confidence 112223322 23455566677 6777643 33332 3466665431
Q ss_pred ccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHH
Q 009897 169 RNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVAN 248 (523)
Q Consensus 169 ~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~ 248 (523)
. ..++.||+||+|||+. |..|++| |.+.. .++++.++.... ..+++|+|||+|.+|+|+|..+++
T Consensus 135 g-----~~~~~~d~lViAtGs~---p~~p~i~---g~~~~--~v~t~~~~~~~~--~~~~~vvViGgG~~g~E~A~~l~~ 199 (474)
T 1zmd_A 135 G-----TQVIDTKNILIATGSE---VTPFPGI---TIDED--TIVSSTGALSLK--KVPEKMVVIGAGVIGVELGSVWQR 199 (474)
T ss_dssp C-----EEEEEEEEEEECCCEE---ECCCTTC---CCCSS--SEECHHHHTTCS--SCCSEEEEECCSHHHHHHHHHHHH
T ss_pred C-----cEEEEeCEEEECCCCC---CCCCCCC---CCCcC--cEEcHHHHhhcc--ccCceEEEECCCHHHHHHHHHHHH
Confidence 1 1279999999999965 7777777 65431 356665443321 237999999999999999999999
Q ss_pred hcCCccCEEEEEeeceeEec-CccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccC
Q 009897 249 RNGVRYPCTLLFKTVHWMVP-DYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKY 327 (523)
Q Consensus 249 ~~~~~~~Vt~~~r~~~~~~p-~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (523)
.+.+ ||++.|.+. ++| ..+ .
T Consensus 200 ~g~~---Vtlv~~~~~-~l~~~~~-----------------------------------~-------------------- 220 (474)
T 1zmd_A 200 LGAD---VTAVEFLGH-VGGVGID-----------------------------------M-------------------- 220 (474)
T ss_dssp TTCE---EEEECSSSS-SSCSSCC-----------------------------------H--------------------
T ss_pred cCCE---EEEEeccCc-cCCcccC-----------------------------------H--------------------
Confidence 8754 999999875 333 211 0
Q ss_pred CCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC--c-EEE-------cCCceeeeccEEEEecCCC
Q 009897 328 NMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN--G-LVI-------DGETTPLVTDIVIFATGYK 396 (523)
Q Consensus 328 ~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~--~-v~l-------~dG~~~~~~D~VI~ATG~~ 396 (523)
.+...+.+.+++.+|+++.+. +.+++.+ + +.+ .++++ +++|.||+|||++
T Consensus 221 ------------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~-i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 221 ------------------EISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEV-ITCDVLLVCIGRR 281 (474)
T ss_dssp ------------------HHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEE-EEESEEEECSCEE
T ss_pred ------------------HHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceE-EEcCEEEECcCCC
Confidence 011112233445567777764 6666543 2 433 25566 9999999999999
Q ss_pred CCcccc--ccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCCC-CchhhHHHHHHHHHHHHcCCC
Q 009897 397 SDEKLK--NIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADSP-SILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 397 ~~~~l~--~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
|+..++ +..+...- +..+.. . ..+.++.|+||++|.+... ...+.+..|++.+|..+.|+.
T Consensus 282 p~~~~l~l~~~g~~~~~~G~i~v---d---~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 346 (474)
T 1zmd_A 282 PFTKNLGLEELGIELDPRGRIPV---N---TRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGA 346 (474)
T ss_dssp ECCTTSSHHHHTCCCCTTSCCCC---C---TTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCcCCchhcCCccCCCCCEEE---C---cCCccCCCCEEEeeecCCCCccHHHHHHHHHHHHHHhcCCC
Confidence 987642 21111100 111111 1 1234689999999988654 346789999999999998863
No 47
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.94 E-value=1.4e-27 Score=250.63 Aligned_cols=307 Identities=16% Similarity=0.166 Sum_probs=190.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCcee-----eCCCCCCCCCCCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFYQ-----FSDFAWPNSVTETFP 101 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 101 (523)
|.+||+|||||++|+++|..|++.|++|+|||+.+.+||+|.. +.|+..+......+. +..+.++.. .....
T Consensus 1 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~ 79 (468)
T 2qae_A 1 NPYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGG-EGVTM 79 (468)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECG-GGCEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccC-CCCcc
Confidence 3579999999999999999999999999999999899999875 333322111000000 000000000 00001
Q ss_pred ChhHH-----------HHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeeccc
Q 009897 102 DHNKV-----------MEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARN 170 (523)
Q Consensus 102 ~~~~~-----------~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 170 (523)
+...+ ...+..+.++.++ .+..++.+ .++. +.+.|.+.++
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v--~~~~g~~~-~i~~------------------------~~~~v~~~~G-- 130 (468)
T 2qae_A 80 DSAKMQQQKERAVKGLTGGVEYLFKKNKV--TYYKGEGS-FETA------------------------HSIRVNGLDG-- 130 (468)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEEEEEE-EEET------------------------TEEEEEETTS--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEE-EeeC------------------------CEEEEEecCC--
Confidence 12222 2234555666777 67776543 3432 3466665443
Q ss_pred CCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhc
Q 009897 171 VSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRN 250 (523)
Q Consensus 171 ~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~ 250 (523)
+..++.||+||+|||+. |..|+++ |.+.. .++++.+.... ...+++|+|||+|.+|+|+|..+++.+
T Consensus 131 ---~~~~~~~d~lviAtG~~---p~~p~~~---g~~~~--~v~t~~~~~~~--~~~~~~vvViGgG~~g~E~A~~l~~~g 197 (468)
T 2qae_A 131 ---KQEMLETKKTIIATGSE---PTELPFL---PFDEK--VVLSSTGALAL--PRVPKTMVVIGGGVIGLELGSVWARLG 197 (468)
T ss_dssp ---CEEEEEEEEEEECCCEE---ECCBTTB---CCCSS--SEECHHHHHTC--SSCCSEEEEECCSHHHHHHHHHHHHTT
T ss_pred ---ceEEEEcCEEEECCCCC---cCCCCCC---CCCcC--ceechHHHhhc--ccCCceEEEECCCHHHHHHHHHHHHhC
Confidence 12379999999999964 7777777 64421 24554433222 124799999999999999999999987
Q ss_pred CCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCC
Q 009897 251 GVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMI 330 (523)
Q Consensus 251 ~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 330 (523)
.+ ||++.|.+. ++|..+ .
T Consensus 198 ~~---Vtlv~~~~~-~l~~~d-----------------------------------~----------------------- 215 (468)
T 2qae_A 198 AE---VTVVEFAPR-CAPTLD-----------------------------------E----------------------- 215 (468)
T ss_dssp CE---EEEECSSSS-SSTTSC-----------------------------------H-----------------------
T ss_pred CE---EEEEecCCc-ccccCC-----------------------------------H-----------------------
Confidence 54 999998775 333221 0
Q ss_pred CCCcccccccCcceeecCcchhhhc-cCCCEEEEecC-ceEEecCc----EEEc--CC--ceeeeccEEEEecCCCCCcc
Q 009897 331 PGHSFLNQISSCMFTVLPRNFYDRV-QGGGLSLMKSR-SFTFCKNG----LVID--GE--TTPLVTDIVIFATGYKSDEK 400 (523)
Q Consensus 331 p~~~~~~~~~~~~~~~~~~~~~~~~-~~g~v~v~~~~-i~~~~~~~----v~l~--dG--~~~~~~D~VI~ATG~~~~~~ 400 (523)
.+.+.+.+.+ ++.+|+++.+. +.++++++ +.++ +| ++ +++|.||+|||++|+..
T Consensus 216 ---------------~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~-i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 216 ---------------DVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRET-VTCEALLVSVGRRPFTG 279 (468)
T ss_dssp ---------------HHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEE-EEESEEEECSCEEECCT
T ss_pred ---------------HHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEE-EECCEEEECCCcccCCC
Confidence 0111222344 45567777764 67776432 4554 67 45 99999999999999876
Q ss_pred cc--ccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCC--CCchhhHHHHHHHHHHHHcCC
Q 009897 401 LK--NIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADS--PSILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 401 l~--~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~--~~~~~~ae~Qa~~~a~~l~g~ 462 (523)
++ +.++...- +..+.. . ..+.++.|+||++|.+.. ....+.+..|++.+|..+.|+
T Consensus 280 ~l~l~~~gl~~~~~G~i~v---d---~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 340 (468)
T 2qae_A 280 GLGLDKINVAKNERGFVKI---G---DHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAGK 340 (468)
T ss_dssp TSCHHHHTCCBCTTSCBCC---C---TTSBCSSTTEEECGGGBSSSCSCHHHHHHHHHHHHHHHTTC
T ss_pred CCCchhcCCccCCCCCEeE---C---CCcccCCCCEEEeeccCCCCCccHhHHHHHHHHHHHHHcCC
Confidence 52 21111100 011111 1 123468999999998876 345688999999999999886
No 48
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.94 E-value=2.6e-27 Score=245.79 Aligned_cols=291 Identities=18% Similarity=0.169 Sum_probs=186.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC--ceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGF--KPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKV 106 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~--~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (523)
|.+||+|||||++|+++|..|++.|. +|+|+|+.+.++.. . + ..++... ......+.+
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~--~--~----~l~~~~~------------~~~~~~~~~ 62 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHH--L--P----PLSKAYL------------AGKATAESL 62 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBC--S--G----GGGTTTT------------TTCSCSGGG
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCc--C--C----CCcHHHh------------CCCCChHHh
Confidence 56899999999999999999999998 79999997654210 0 0 0000000 000001111
Q ss_pred HHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEe
Q 009897 107 MEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILC 186 (523)
Q Consensus 107 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlA 186 (523)
...+.++.+++++ .++++++|+.++... +.|++.++. ++.||+||+|
T Consensus 63 ~~~~~~~~~~~gv--~~~~~~~v~~i~~~~------------------------~~v~~~~g~-------~~~~d~lviA 109 (431)
T 1q1r_A 63 YLRTPDAYAAQNI--QLLGGTQVTAINRDR------------------------QQVILSDGR-------ALDYDRLVLA 109 (431)
T ss_dssp BSSCHHHHHHTTE--EEECSCCEEEEETTT------------------------TEEEETTSC-------EEECSEEEEC
T ss_pred cccCHHHHHhCCC--EEEeCCEEEEEECCC------------------------CEEEECCCC-------EEECCEEEEc
Confidence 1112234456777 788899999998753 467776654 7999999999
Q ss_pred eeecCCCCCCCCCCCCCCCCCCCc-c-EEecCCCCchh----hhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEE
Q 009897 187 IGRYSDLPNTPDFPMNKGPEVFDG-K-VLHSMNDDLAA----ELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLF 260 (523)
Q Consensus 187 tG~~s~~p~~p~~p~~~g~~~~~g-~-~~h~~~~~~~~----~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~ 260 (523)
||.. |+.|++| |.+ ..+ . +.+.....+.. ....+++|+|||+|.+|+|+|..+++.+.. ||++.
T Consensus 110 tG~~---p~~~~i~---G~~-~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~---Vtlv~ 179 (431)
T 1q1r_A 110 TGGR---PRPLPVA---SGA-VGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMH---VTLLD 179 (431)
T ss_dssp CCEE---ECCCGGG---TTH-HHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEC
T ss_pred CCCC---ccCCCCC---Ccc-cCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCE---EEEEE
Confidence 9964 7888888 754 222 1 33222221110 113589999999999999999999998754 99999
Q ss_pred eeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCccccccc
Q 009897 261 KTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQIS 340 (523)
Q Consensus 261 r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 340 (523)
+.+. +++... + .
T Consensus 180 ~~~~-~l~~~~--~---------------------------------~-------------------------------- 191 (431)
T 1q1r_A 180 TAAR-VLERVT--A---------------------------------P-------------------------------- 191 (431)
T ss_dssp SSSS-TTTTTS--C---------------------------------H--------------------------------
T ss_pred eCCc-cccchh--h---------------------------------H--------------------------------
Confidence 8765 222110 0 0
Q ss_pred CcceeecCcchhhhccCCCEEEEecC-ceEEec---C----cEEEcCCceeeeccEEEEecCCCCCccccccccchhhhh
Q 009897 341 SCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCK---N----GLVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQK 412 (523)
Q Consensus 341 ~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~---~----~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~ 412 (523)
.+.+.+.+.+++.+|+++.+. +.+++. + +|+++||++ +++|.||+|+|++|+..+++..+...-..
T Consensus 192 -----~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~-i~~D~Vv~a~G~~p~~~l~~~~gl~~~~g 265 (431)
T 1q1r_A 192 -----PVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTR-LPADLVIAGIGLIPNCELASAAGLQVDNG 265 (431)
T ss_dssp -----HHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCE-EECSEEEECCCEEECCHHHHHTTCCBSSS
T ss_pred -----HHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCE-EEcCEEEECCCCCcCcchhhccCCCCCCC
Confidence 001111233344456777664 666654 2 377889988 99999999999999876544322211111
Q ss_pred hhcCCCcccccccccCCCCCeEEecccCCCC-----------chhhHHHHHHHHHHHHcCCC
Q 009897 413 QITGSSAPLYREGIHPQIPQLAILGYADSPS-----------ILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 413 ~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~~-----------~~~~ae~Qa~~~a~~l~g~~ 463 (523)
+.. ...+.++.|+||++|.+.... .+..+..||+.+|..|.|+.
T Consensus 266 -i~V------d~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 320 (431)
T 1q1r_A 266 -IVI------NEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKV 320 (431)
T ss_dssp -EEC------CTTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCC
T ss_pred -EEE------CCCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCC
Confidence 111 122446889999999875431 34679999999999998864
No 49
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.94 E-value=2.4e-26 Score=242.06 Aligned_cols=307 Identities=14% Similarity=0.143 Sum_probs=192.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCc------eeeCCCCCCCCCCCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSF------YQFSDFAWPNSVTETFP 101 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 101 (523)
.+||+|||||++|+++|..|++.|.+|+|||+++.+||+|.. +.|...+...... +...+.++. ....
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~----~~~~ 81 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYP----EPEL 81 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCC----CCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccC----CCcc
Confidence 479999999999999999999999999999998899999865 2332211100000 000111111 1112
Q ss_pred ChhHHHH-----------HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecc-
Q 009897 102 DHNKVME-----------YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEAR- 169 (523)
Q Consensus 102 ~~~~~~~-----------yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 169 (523)
....+.. .+...+++.++ .+..++.+. ++ . +.+.|++.++.
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-~~--~----------------------~~v~v~~~~g~~ 134 (482)
T 1ojt_A 82 DIDMLRAYKDGVVSRLTGGLAGMAKSRKV--DVIQGDGQF-LD--P----------------------HHLEVSLTAGDA 134 (482)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEEEEEEE-EE--T----------------------TEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEeeEEEE-cc--C----------------------CEEEEEecCCcc
Confidence 2233322 24455566677 677766543 22 1 34666544430
Q ss_pred ----cCCcceeEEEeCEEEEeeeecCCCCCCCC-CCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHH
Q 009897 170 ----NVSSATEAYQVDFVILCIGRYSDLPNTPD-FPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAA 244 (523)
Q Consensus 170 ----~~~~~~~~~~~d~vVlAtG~~s~~p~~p~-~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~ 244 (523)
..+++..++.||+||+|||+. |..|+ +| . + ..++++.+..... ..+++|+|||+|.+|+|+|.
T Consensus 135 ~~~~~~~g~~~~i~ad~lViAtGs~---p~~~~~i~---~-~---~~v~~~~~~~~~~--~~~~~vvViGgG~ig~E~A~ 202 (482)
T 1ojt_A 135 YEQAAPTGEKKIVAFKNCIIAAGSR---VTKLPFIP---E-D---PRIIDSSGALALK--EVPGKLLIIGGGIIGLEMGT 202 (482)
T ss_dssp TTEEEEEEEEEEEEEEEEEECCCEE---ECCCSSCC---C-C---TTEECHHHHTTCC--CCCSEEEEESCSHHHHHHHH
T ss_pred cccccccCcceEEEcCEEEECCCCC---CCCCCCCC---c-c---CcEEcHHHHhccc--ccCCeEEEECCCHHHHHHHH
Confidence 001122479999999999976 56665 44 2 1 1355554433221 23899999999999999999
Q ss_pred HHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCc
Q 009897 245 EVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPL 324 (523)
Q Consensus 245 ~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (523)
.+++.+.+ ||++.|.+. ++|..+
T Consensus 203 ~l~~~G~~---Vtlv~~~~~-~l~~~~----------------------------------------------------- 225 (482)
T 1ojt_A 203 VYSTLGSR---LDVVEMMDG-LMQGAD----------------------------------------------------- 225 (482)
T ss_dssp HHHHHTCE---EEEECSSSS-SSTTSC-----------------------------------------------------
T ss_pred HHHHcCCe---EEEEEECCc-cccccC-----------------------------------------------------
Confidence 99998754 999999775 333221
Q ss_pred ccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC----cEEEcC----CceeeeccEEEEecCC
Q 009897 325 KKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN----GLVIDG----ETTPLVTDIVIFATGY 395 (523)
Q Consensus 325 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~----~v~l~d----G~~~~~~D~VI~ATG~ 395 (523)
+.+.+.+.+.+++.+|+++.+. +.+++.+ .|++.| |++ +++|.||+|||+
T Consensus 226 --------------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~-~~~D~vv~a~G~ 284 (482)
T 1ojt_A 226 --------------------RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEP-QRYDAVLVAAGR 284 (482)
T ss_dssp --------------------HHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSC-EEESCEEECCCE
T ss_pred --------------------HHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceE-EEcCEEEECcCC
Confidence 0011122344556678888875 7777543 267777 777 899999999999
Q ss_pred CCCcccc--ccccchhhh-hhhcCCCcccccccccCCCCCeEEecccCCC-CchhhHHHHHHHHHHHHcCCC
Q 009897 396 KSDEKLK--NIFKSTYFQ-KQITGSSAPLYREGIHPQIPQLAILGYADSP-SILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 396 ~~~~~l~--~~~~~~~l~-~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
+|+..++ +..+...-. ..+.. . ..+.++.|+||++|.+... ...+.+..|++.+|..+.|+.
T Consensus 285 ~p~~~~l~~~~~gl~~~~~G~i~v---d---~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~ 350 (482)
T 1ojt_A 285 APNGKLISAEKAGVAVTDRGFIEV---D---KQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHK 350 (482)
T ss_dssp EECGGGTTGGGTTCCCCTTSCCCC---C---TTSBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCC
T ss_pred CcCCCCCChhhcCceeCCCCCEee---C---CCcccCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcCCC
Confidence 9997652 222111100 11111 1 2234689999999988763 346789999999999998853
No 50
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.7e-27 Score=247.26 Aligned_cols=305 Identities=15% Similarity=0.191 Sum_probs=186.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCce----eeCCCCCCCC---CC-C
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFY----QFSDFAWPNS---VT-E 98 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~----~~~~~~~~~~---~~-~ 98 (523)
..+||+|||||++|+++|..|++.|.+|+|||++ .+||+|.+ +.|...+......+ ....+.+... .. .
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 3589999999999999999999999999999997 79999975 33332211000000 0011111100 00 0
Q ss_pred CCCChhHHHHHHH-----------HHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEee
Q 009897 99 TFPDHNKVMEYLQ-----------AYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQE 167 (523)
Q Consensus 99 ~~~~~~~~~~yl~-----------~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 167 (523)
...+...+.++.+ ...+..++ .+..+ ++..+ + ...+.|...+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i---~---------------------~~~~~v~~~~ 141 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKV--DVVFG-WARFN---K---------------------DGNVEVQKRD 141 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTE--EEEEE-EEEEC---T---------------------TSCEEEEESS
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEe---e---------------------CCEEEEEeCC
Confidence 1122333433332 33334444 44444 24332 2 1346665543
Q ss_pred cccCCcceeEEEeCEEEEeeeecCCCCCCC-CCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHH
Q 009897 168 ARNVSSATEAYQVDFVILCIGRYSDLPNTP-DFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEV 246 (523)
Q Consensus 168 ~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p-~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l 246 (523)
+ +.+++.||+||+|||+. |..| ++| |.+. ++++.++... ...+++|+|||+|.+|+|+|..+
T Consensus 142 g-----~~~~~~~d~lviAtGs~---p~~p~~i~---g~~~----~~~~~~~~~l--~~~~~~vvViGgG~ig~E~A~~l 204 (479)
T 2hqm_A 142 N-----TTEVYSANHILVATGGK---AIFPENIP---GFEL----GTDSDGFFRL--EEQPKKVVVVGAGYIGIELAGVF 204 (479)
T ss_dssp S-----CCEEEEEEEEEECCCEE---ECCCTTST---TGGG----SBCHHHHHHC--SSCCSEEEEECSSHHHHHHHHHH
T ss_pred C-----cEEEEEeCEEEEcCCCC---CCCCCCCC---Cccc----ccchHHHhcc--cccCCeEEEECCCHHHHHHHHHH
Confidence 3 12368999999999964 7788 788 6532 2233222111 12479999999999999999999
Q ss_pred HHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCccc
Q 009897 247 ANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKK 326 (523)
Q Consensus 247 ~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (523)
++.+.+ ||++.|.+. ++|..+ .
T Consensus 205 ~~~g~~---Vtlv~~~~~-~l~~~d-----------------------------------~------------------- 226 (479)
T 2hqm_A 205 HGLGSE---THLVIRGET-VLRKFD-----------------------------------E------------------- 226 (479)
T ss_dssp HHTTCE---EEEECSSSS-SCTTSC-----------------------------------H-------------------
T ss_pred HHcCCc---eEEEEeCCc-cccccC-----------------------------------H-------------------
Confidence 998754 999999875 223321 0
Q ss_pred CCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC------cEEEcCC-ceeeeccEEEEecCCCCC
Q 009897 327 YNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN------GLVIDGE-TTPLVTDIVIFATGYKSD 398 (523)
Q Consensus 327 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~------~v~l~dG-~~~~~~D~VI~ATG~~~~ 398 (523)
.+.+.+.+.+++.+|+++.+. +.+++++ .|+++|| ++ +++|.||+|||++|+
T Consensus 227 -------------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~-i~~D~vv~a~G~~p~ 286 (479)
T 2hqm_A 227 -------------------CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSI-DDVDELIWTIGRKSH 286 (479)
T ss_dssp -------------------HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEE-EEESEEEECSCEEEC
T ss_pred -------------------HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEE-EEcCEEEECCCCCCc
Confidence 011112233444567777764 6666542 3677888 67 999999999999998
Q ss_pred ccc-cccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCC-CCchhhHHHHHHHHHHHHcCC
Q 009897 399 EKL-KNIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADS-PSILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 399 ~~l-~~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~-~~~~~~ae~Qa~~~a~~l~g~ 462 (523)
..+ ++..+...- +..+.. . ..+.++.|+||++|.+.. ....+.+..|++.+|..+.|.
T Consensus 287 ~~l~l~~~gl~~~~~G~i~v---d---~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 287 LGMGSENVGIKLNSHDQIIA---D---EYQNTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGP 347 (479)
T ss_dssp CCSSGGGGTCCBCTTSCBCC---C---TTCBCSSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHSC
T ss_pred cccChhhcCceECCCCCEeE---C---CCCccCCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcCC
Confidence 754 222211110 011111 1 223568999999999854 345688999999999998764
No 51
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.94 E-value=1e-26 Score=246.04 Aligned_cols=313 Identities=12% Similarity=0.114 Sum_probs=194.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC---CCceEEEccCCCCCccccc--ccCcccccCCcCc----eeeCCCCCCCCCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLEN---GFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSF----YQFSDFAWPNSVTET 99 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~---g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 99 (523)
|.+||+|||||++|+++|..|++. |++|+|||+.+ +||+|.. +.|+..+...... ..+..+.++......
T Consensus 1 M~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~ 79 (499)
T 1xdi_A 1 MVTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDA 79 (499)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCC
Confidence 458999999999999999999998 99999999987 9999875 2333222111000 011111111000011
Q ss_pred CCChhHH-----------HHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeec
Q 009897 100 FPDHNKV-----------MEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEA 168 (523)
Q Consensus 100 ~~~~~~~-----------~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 168 (523)
..+...+ ..++.++.+++++ .+..++ +..++... + ...+.+.|...++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~-~~~i~~~~--~----------------~~~~~~~V~~~~g 138 (499)
T 1xdi_A 80 KISLPQIHARVKTLAAAQSADITAQLLSMGV--QVIAGR-GELIDSTP--G----------------LARHRIKATAADG 138 (499)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESE-EEECCSSS--C----------------CSSEEEEEECTTS
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEecCcc--c----------------CCCCEEEEEeCCC
Confidence 1222333 3335566677777 676664 55544310 0 0012344443322
Q ss_pred ccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHH
Q 009897 169 RNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVAN 248 (523)
Q Consensus 169 ~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~ 248 (523)
+...+.||+||+|||.. |..|++| |.+.. .++++.+.... ...+++|+|||+|.+|+|+|..++.
T Consensus 139 -----~~~~~~~d~lviATGs~---p~~p~i~---g~~~~--~v~~~~~~~~~--~~~~~~vvViGgG~ig~E~A~~l~~ 203 (499)
T 1xdi_A 139 -----STSEHEADVVLVATGAS---PRILPSA---QPDGE--RILTWRQLYDL--DALPDHLIVVGSGVTGAEFVDAYTE 203 (499)
T ss_dssp -----CEEEEEESEEEECCCEE---ECCCGGG---CCCSS--SEEEGGGGGGC--SSCCSSEEEESCSHHHHHHHHHHHH
T ss_pred -----cEEEEEeCEEEEcCCCC---CCCCCCC---CCCcC--cEEehhHhhhh--hccCCeEEEECCCHHHHHHHHHHHH
Confidence 11368999999999964 7888787 65432 25555554432 1247999999999999999999999
Q ss_pred hcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCC
Q 009897 249 RNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYN 328 (523)
Q Consensus 249 ~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (523)
.+.. ||++.|.+. ++|..+
T Consensus 204 ~g~~---Vtlv~~~~~-~l~~~d--------------------------------------------------------- 222 (499)
T 1xdi_A 204 LGVP---VTVVASQDH-VLPYED--------------------------------------------------------- 222 (499)
T ss_dssp TTCC---EEEECSSSS-SSCCSS---------------------------------------------------------
T ss_pred cCCe---EEEEEcCCc-cccccC---------------------------------------------------------
Confidence 8754 999998765 333221
Q ss_pred CCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecCc----EEEcCCceeeeccEEEEecCCCCCcccc-
Q 009897 329 MIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNG----LVIDGETTPLVTDIVIFATGYKSDEKLK- 402 (523)
Q Consensus 329 l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~----v~l~dG~~~~~~D~VI~ATG~~~~~~l~- 402 (523)
+.+...+.+.+++.+|+++.+. +.+++.++ +.+.+|++ +++|.||+|+|++|+..++
T Consensus 223 ----------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~-i~aD~Vv~a~G~~p~~~~l~ 285 (499)
T 1xdi_A 223 ----------------ADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRT-VEGSHALMTIGSVPNTSGLG 285 (499)
T ss_dssp ----------------HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCE-EEESEEEECCCEEECCSSSC
T ss_pred ----------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcE-EEcCEEEECCCCCcCCCcCC
Confidence 0011122234455567777764 67776432 45568887 9999999999999998652
Q ss_pred -ccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCCC-CchhhHHHHHHHHHHHHcCC
Q 009897 403 -NIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADSP-SILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 403 -~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-~~~~~ae~Qa~~~a~~l~g~ 462 (523)
+..+...- +..+.. . ..+.++.|+||++|.+... ...+.+..|++.+|..+.|+
T Consensus 286 l~~~gl~~~~~G~i~V---d---~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 286 LERVGIQLGRGNYLTV---D---RVSRTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALGE 342 (499)
T ss_dssp TTTTTCCCBTTTBCCC---C---SSSBCSSTTEEECSGGGTSCSCHHHHHHHHHHHHHHHTTC
T ss_pred chhcCceECCCCCEEE---C---CCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 22221110 011111 1 2234689999999988654 34678999999999999986
No 52
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.94 E-value=1.2e-26 Score=245.50 Aligned_cols=305 Identities=12% Similarity=0.134 Sum_probs=179.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCc----CceeeCCCCCCCCCCCCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPK----SFYQFSDFAWPNSVTETFPD 102 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 102 (523)
|.+||+|||||++|+++|..|++.|.+|+|||++ .+||+|.. +.|...+.... .......+.+... ...+
T Consensus 1 m~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~---~~~~ 76 (500)
T 1onf_A 1 MVYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK---FSFN 76 (500)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC---CCCC
T ss_pred CccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC---CccC
Confidence 4689999999999999999999999999999997 59999975 33332111000 0000111111110 1112
Q ss_pred hhHHH-----------HHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecc--
Q 009897 103 HNKVM-----------EYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEAR-- 169 (523)
Q Consensus 103 ~~~~~-----------~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 169 (523)
..++. .++....++.++ .+..++. ..++. +.|++.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~~-~~id~--------------------------~~v~v~~~~~~ 127 (500)
T 1onf_A 77 LPLLVERRDKYIQRLNNIYRQNLSKDKV--DLYEGTA-SFLSE--------------------------NRILIKGTKDN 127 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESCC-CCC---------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEE-EEeeC--------------------------CEEEEEecccc
Confidence 22222 223344455565 4555432 21111 223332200
Q ss_pred ----cCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHH
Q 009897 170 ----NVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAE 245 (523)
Q Consensus 170 ----~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~ 245 (523)
..++...++.||+||+|||+ .|..|++| |.+ .++++.++... .. +++|+|||+|.+|+|+|..
T Consensus 128 ~~~~~~~~~~~~~~~d~lViAtGs---~p~~p~i~---G~~----~~~~~~~~~~~-~~--~~~vvViGgG~ig~E~A~~ 194 (500)
T 1onf_A 128 NNKDNGPLNEEILEGRNILIAVGN---KPVFPPVK---GIE----NTISSDEFFNI-KE--SKKIGIVGSGYIAVELINV 194 (500)
T ss_dssp -------------CBSSEEECCCC---CBCCCSCT---TGG----GCEEHHHHTTC-CC--CSEEEEECCSHHHHHHHHH
T ss_pred ccccccCCCceEEEeCEEEECCCC---CCCCCCCC---CCC----cccCHHHHhcc-CC--CCeEEEECChHHHHHHHHH
Confidence 00000126899999999994 58888888 764 24555544432 11 8999999999999999999
Q ss_pred HHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcc
Q 009897 246 VANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLK 325 (523)
Q Consensus 246 l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (523)
+++.+.+ ||++.|.+. ++|..+ .
T Consensus 195 l~~~g~~---Vtlv~~~~~-~l~~~d-----------------------------------~------------------ 217 (500)
T 1onf_A 195 IKRLGID---SYIFARGNR-ILRKFD-----------------------------------E------------------ 217 (500)
T ss_dssp HHTTTCE---EEEECSSSS-SCTTSC-----------------------------------H------------------
T ss_pred HHHcCCe---EEEEecCCc-cCcccc-----------------------------------h------------------
Confidence 9998754 999999775 233321 0
Q ss_pred cCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC-----cEEEcCCceeeeccEEEEecCCCCCc
Q 009897 326 KYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN-----GLVIDGETTPLVTDIVIFATGYKSDE 399 (523)
Q Consensus 326 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~-----~v~l~dG~~~~~~D~VI~ATG~~~~~ 399 (523)
.+.+.+.+.+++.+|+++.+. +.+++++ .|+++||++.+++|.||+|||++|+.
T Consensus 218 --------------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 218 --------------------SVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp --------------------HHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred --------------------hhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 011122234455667787775 7777642 36777886437999999999999997
Q ss_pred c-c-cccccchhhhhhhcCCCcccccccccCCCCCeEEecccC-----------------------------------CC
Q 009897 400 K-L-KNIFKSTYFQKQITGSSAPLYREGIHPQIPQLAILGYAD-----------------------------------SP 442 (523)
Q Consensus 400 ~-l-~~~~~~~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~-----------------------------------~~ 442 (523)
. + ++..+...-...+.. . ..+.++.|+||++|.+. ..
T Consensus 278 ~~l~~~~~g~~~~~G~i~v---d---~~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (500)
T 1onf_A 278 ENLKLEKLNVETNNNYIVV---D---ENQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNV 351 (500)
T ss_dssp TTSSCTTTTCCBSSSCEEE---C---TTCBCSSSSEEECSTTEEEC------------------------------CBCC
T ss_pred CCCCchhcCccccCCEEEE---C---CCcccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcc
Confidence 4 3 222221110111111 1 22346899999999765 12
Q ss_pred CchhhHHHHHHHHHHHHcCC
Q 009897 443 SILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 443 ~~~~~ae~Qa~~~a~~l~g~ 462 (523)
...+.|..|++.+|..+.|.
T Consensus 352 ~~~~~A~~~g~~aa~~i~g~ 371 (500)
T 1onf_A 352 QLTPVAINAGRLLADRLFLK 371 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHSC
T ss_pred cchhHHHHHHHHHHHHHhCC
Confidence 24578999999999999874
No 53
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.94 E-value=1.4e-26 Score=242.35 Aligned_cols=298 Identities=15% Similarity=0.210 Sum_probs=188.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCce----eeCC---CCCCCCCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFY----QFSD---FAWPNSVTET 99 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~ 99 (523)
..+||+|||||++|+++|..|++.|.+|+|||+ +.+||+|.+ +.|+..+......+ .+.. +.++. ...
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~--~~~ 80 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISV--ASP 80 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCC--CCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCccc--CCC
Confidence 348999999999999999999999999999999 789999976 34433221111100 1111 22211 111
Q ss_pred CCChhHHHHH-----------HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeec
Q 009897 100 FPDHNKVMEY-----------LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEA 168 (523)
Q Consensus 100 ~~~~~~~~~y-----------l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 168 (523)
..+.+++..+ ++.+.++.++ .+..++.+. ++ . ++|++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~~~~-~~--~------------------------~~v~v~~- 130 (458)
T 1lvl_A 81 RLDIGQSVAWKDGIVDRLTTGVAALLKKHGV--KVVHGWAKV-LD--G------------------------KQVEVDG- 130 (458)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEECSCEEE-EE--T------------------------TEEEETT-
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEEEEEEE-cc--C------------------------CEEEEee-
Confidence 2333444433 3345566677 666665443 22 1 4566543
Q ss_pred ccCCcceeEEEeCEEEEeeeecCCCCCCCC-CCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHH
Q 009897 169 RNVSSATEAYQVDFVILCIGRYSDLPNTPD-FPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVA 247 (523)
Q Consensus 169 ~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~-~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~ 247 (523)
. ++.||+||+|||+. |..|+ +| . .+.++++.++.... ..+++|+|||+|.+|+|+|..|+
T Consensus 131 ~-------~~~~d~lviATGs~---p~~~~~~~---~----~~~v~~~~~~~~~~--~~~~~vvViGgG~~g~e~A~~l~ 191 (458)
T 1lvl_A 131 Q-------RIQCEHLLLATGSS---SVELPMLP---L----GGPVISSTEALAPK--ALPQHLVVVGGGYIGLELGIAYR 191 (458)
T ss_dssp E-------EEECSEEEECCCEE---ECCBTTBC---C----BTTEECHHHHTCCS--SCCSEEEEECCSHHHHHHHHHHH
T ss_pred E-------EEEeCEEEEeCCCC---CCCCCCCC---c----cCcEecHHHHhhhh--ccCCeEEEECcCHHHHHHHHHHH
Confidence 3 79999999999965 66654 44 1 22466665544321 24799999999999999999999
Q ss_pred HhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccC
Q 009897 248 NRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKY 327 (523)
Q Consensus 248 ~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (523)
+.+.+ ||++.+.+. ++|..+ .
T Consensus 192 ~~g~~---Vtlv~~~~~-~l~~~~-----------------------------------~-------------------- 212 (458)
T 1lvl_A 192 KLGAQ---VSVVEARER-ILPTYD-----------------------------------S-------------------- 212 (458)
T ss_dssp HHTCE---EEEECSSSS-SSTTSC-----------------------------------H--------------------
T ss_pred HCCCe---EEEEEcCCc-cccccC-----------------------------------H--------------------
Confidence 98754 999999775 233221 0
Q ss_pred CCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecCcEEEc--CC--ceeeeccEEEEecCCCCCcccc
Q 009897 328 NMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNGLVID--GE--TTPLVTDIVIFATGYKSDEKLK 402 (523)
Q Consensus 328 ~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~v~l~--dG--~~~~~~D~VI~ATG~~~~~~l~ 402 (523)
.+.+.+.+.+++.+|+++.+. +.+++.+++.+. +| ++ +++|.||+|||++|+..++
T Consensus 213 ------------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~-i~~D~vv~a~G~~p~~~~l 273 (458)
T 1lvl_A 213 ------------------ELTAPVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLR-LEADRVLVAVGRRPRTKGF 273 (458)
T ss_dssp ------------------HHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCE-ECCSCEEECCCEEECCSSS
T ss_pred ------------------HHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEE-EECCEEEECcCCCcCCCCC
Confidence 001111233344456777664 677765335554 56 45 9999999999999987642
Q ss_pred --ccccchhhhhhhcCCCcccccccccCCCCCeEEecccCCC-CchhhHHHHHHHHHHHHcCC
Q 009897 403 --NIFKSTYFQKQITGSSAPLYREGIHPQIPQLAILGYADSP-SILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 403 --~~~~~~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-~~~~~ae~Qa~~~a~~l~g~ 462 (523)
+..+....+..+..+ ..+.++.|+||++|.+... ...+.+..|++.+|..+.|+
T Consensus 274 ~~~~~g~~~~~~~i~vd------~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 330 (458)
T 1lvl_A 274 NLECLDLKMNGAAIAID------ERCQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAGK 330 (458)
T ss_dssp SGGGSCCCEETTEECCC------TTCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHTTC
T ss_pred CcHhcCCcccCCEEeEC------CCCcCCCCCEEEeeccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 211111001011111 2244688999999987653 34678999999999999885
No 54
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.94 E-value=6.3e-27 Score=245.50 Aligned_cols=301 Identities=14% Similarity=0.153 Sum_probs=187.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCce-----eeCCCCCCCCCCCCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFY-----QFSDFAWPNSVTETFPD 102 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 102 (523)
.+||+|||||++|+++|..|++.|++|+|+|+. .+||.|.. +.|+..+......+ .+..+.++. ....+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~---~~~~~ 78 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISG---EVTFD 78 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEE---CCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCC---CCccC
Confidence 379999999999999999999999999999997 78998865 23332211100000 001111100 00011
Q ss_pred hh-----------HHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccC
Q 009897 103 HN-----------KVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNV 171 (523)
Q Consensus 103 ~~-----------~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 171 (523)
.. .+.+++.+.+++.++ .++.++.+. .+ .+.+.|.+.++
T Consensus 79 ~~~~~~~~~~~~~~l~~~l~~~~~~~gv--~~~~g~~~~----id---------------------~~~v~V~~~~G--- 128 (464)
T 2a8x_A 79 YGIAYDRSRKVAEGRVAGVHFLMKKNKI--TEIHGYGTF----AD---------------------ANTLLVDLNDG--- 128 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEECEEEEE----SS---------------------SSEEEEEETTS---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEEE----ec---------------------CCeEEEEeCCC---
Confidence 11 233445566667777 677765543 12 13466665443
Q ss_pred CcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcC
Q 009897 172 SSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNG 251 (523)
Q Consensus 172 ~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~ 251 (523)
+..++.||+||+|||+. |..|+++ |.+. .++++.+.... ...+++|+|||+|.+|+|+|..+++.+.
T Consensus 129 --~~~~~~~d~lViAtG~~---~~~~~~~---g~~~---~~~~~~~~~~~--~~~~~~vvViGgG~~g~E~A~~l~~~g~ 195 (464)
T 2a8x_A 129 --GTESVTFDNAIIATGSS---TRLVPGT---SLSA---NVVTYEEQILS--RELPKSIIIAGAGAIGMEFGYVLKNYGV 195 (464)
T ss_dssp --CCEEEEEEEEEECCCEE---ECCCTTC---CCBT---TEECHHHHHTC--SSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred --ceEEEEcCEEEECCCCC---CCCCCCC---CCCc---eEEecHHHhhc--cccCCeEEEECCcHHHHHHHHHHHHcCC
Confidence 11379999999999975 6777777 6442 25554433221 1247999999999999999999999875
Q ss_pred CccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCC
Q 009897 252 VRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIP 331 (523)
Q Consensus 252 ~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p 331 (523)
+ ||++.|.+. ++|..+ .
T Consensus 196 ~---Vtlv~~~~~-~l~~~~-----------------------------------~------------------------ 212 (464)
T 2a8x_A 196 D---VTIVEFLPR-ALPNED-----------------------------------A------------------------ 212 (464)
T ss_dssp E---EEEECSSSS-SSTTSC-----------------------------------H------------------------
T ss_pred e---EEEEEcCCc-cccccC-----------------------------------H------------------------
Confidence 4 999999875 333221 0
Q ss_pred CCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecCc----EEEc-CC--ceeeeccEEEEecCCCCCcccc-
Q 009897 332 GHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNG----LVID-GE--TTPLVTDIVIFATGYKSDEKLK- 402 (523)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~----v~l~-dG--~~~~~~D~VI~ATG~~~~~~l~- 402 (523)
.+.+.+.+.+++.+|+++.+. +.++++++ +.+. +| ++ +++|.||+|||++|+..++
T Consensus 213 --------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~-~~~D~vv~a~G~~p~~~~l~ 277 (464)
T 2a8x_A 213 --------------DVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQE-LKAEKVLQAIGFAPNVEGYG 277 (464)
T ss_dssp --------------HHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEE-EEESEEEECSCEEECCSSSC
T ss_pred --------------HHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEE-EEcCEEEECCCCCccCCCCC
Confidence 001111233344456777764 66776432 4444 66 45 8999999999999997652
Q ss_pred -ccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCCC-CchhhHHHHHHHHHHHHcC
Q 009897 403 -NIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADSP-SILRTTEMRSKCLAHFLAG 461 (523)
Q Consensus 403 -~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-~~~~~ae~Qa~~~a~~l~g 461 (523)
+..+...- +..+.. . ..+.++.|+||++|.+... ...+.+..|++.+|..+.|
T Consensus 278 ~~~~gl~~~~~G~i~v---d---~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 278 LDKAGVALTDRKAIGV---D---DYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp HHHHTCCBCTTSSBCC---C---TTSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHHT
T ss_pred chhcCCccCCCCCEeE---C---cCCccCCCCEEEeECcCCCccCHHHHHHHHHHHHHHhcC
Confidence 21111100 011111 1 2234689999999988654 3467899999999999988
No 55
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.94 E-value=2.2e-26 Score=235.36 Aligned_cols=287 Identities=16% Similarity=0.180 Sum_probs=191.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--CceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENG--FKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVM 107 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g--~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (523)
.+||+|||||++|+++|..|++.| .+|+++|++. |..|.... +. . .+ .......++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~--l~----~------~~-------~~~~~~~~~~ 62 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPM--LS----T------GF-------SKNKDADGLA 62 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGG--GG----G------TT-------TTTCCHHHHE
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCccc--cc----H------HH-------hCCCCHHHhh
Confidence 479999999999999999999998 4689999865 44443210 00 0 00 0111223343
Q ss_pred -HHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEe
Q 009897 108 -EYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILC 186 (523)
Q Consensus 108 -~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlA 186 (523)
.++..+++++++ .+.++++|..++... ++|++.++ ++.||+||+|
T Consensus 63 ~~~~~~~~~~~~v--~~~~~~~v~~i~~~~------------------------~~v~~~~~--------~~~~d~lviA 108 (384)
T 2v3a_A 63 MAEPGAMAEQLNA--RILTHTRVTGIDPGH------------------------QRIWIGEE--------EVRYRDLVLA 108 (384)
T ss_dssp EECHHHHHHHTTC--EEECSCCCCEEEGGG------------------------TEEEETTE--------EEECSEEEEC
T ss_pred ccCHHHHHHhCCc--EEEeCCEEEEEECCC------------------------CEEEECCc--------EEECCEEEEe
Confidence 356777788888 788888898888643 56766432 7899999999
Q ss_pred eeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchh----hhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEee
Q 009897 187 IGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAA----ELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKT 262 (523)
Q Consensus 187 tG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~----~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~ 262 (523)
||+. |..|++| |.+. ..++++..+.+.. ....+++|+|||+|.+|+|+|..+++.+.+ ||++.+.
T Consensus 109 tG~~---p~~p~i~---g~~~--~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtlv~~~ 177 (384)
T 2v3a_A 109 WGAE---PIRVPVE---GDAQ--DALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQ---LDVVAPC 177 (384)
T ss_dssp CCEE---ECCCCCB---STTT--TCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCC---cCCCCCC---CcCc--CCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCe---EEEEecC
Confidence 9965 7788787 6542 2355555543321 123489999999999999999999998754 9999987
Q ss_pred ceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCc
Q 009897 263 VHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSC 342 (523)
Q Consensus 263 ~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 342 (523)
+. +++... +
T Consensus 178 ~~-~~~~~~--~-------------------------------------------------------------------- 186 (384)
T 2v3a_A 178 EQ-VMPGLL--H-------------------------------------------------------------------- 186 (384)
T ss_dssp SS-SSTTTS--C--------------------------------------------------------------------
T ss_pred cc-hhhccc--C--------------------------------------------------------------------
Confidence 64 222210 0
Q ss_pred ceeecCcchhhhccCCCEEEEecC-ceEEecC----cEEEcCCceeeeccEEEEecCCCCCccccccccchhhhhhhcCC
Q 009897 343 MFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN----GLVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQKQITGS 417 (523)
Q Consensus 343 ~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~----~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~~ 417 (523)
..+.+.+.+.+++.+|+++.+. +.+++.+ .|+++||++ +++|.||+|||++++..+.+.++...-+. +..
T Consensus 187 --~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~-i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~v- 261 (384)
T 2v3a_A 187 --PAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEV-IPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVV- 261 (384)
T ss_dssp --HHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCE-EEESEEEECSCEEECCHHHHHTTCCBSSS-EEE-
T ss_pred --HHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCE-EECCEEEECcCCCcCHHHHHHCCCCCCCC-EEE-
Confidence 0011122344555667777764 6766532 377889988 99999999999999876543222221111 111
Q ss_pred CcccccccccCCCCCeEEecccCCC-----CchhhHHHHHHHHHHHHcCCC
Q 009897 418 SAPLYREGIHPQIPQLAILGYADSP-----SILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 418 ~~~ly~~~~~~~~p~l~~iG~~~~~-----~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
. ..+.++.|+||++|.+... ..+..+..||+.+|+.|.|+.
T Consensus 262 --d---~~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~~ 307 (384)
T 2v3a_A 262 --D---RSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNP 307 (384)
T ss_dssp --C---TTCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTCC
T ss_pred --C---CCCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCCC
Confidence 1 2244789999999987531 134568999999999998863
No 56
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.93 E-value=1.3e-26 Score=242.92 Aligned_cols=298 Identities=18% Similarity=0.173 Sum_probs=186.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCce----eeCCCCCCCCCCCCCCCh
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFY----QFSDFAWPNSVTETFPDH 103 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 103 (523)
.+||+|||||++|+++|..|++.|.+|+|||+++ +||+|.. +.|+..+......+ .+..+.++. ....+.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~---~~~~~~ 81 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKA---KPELDL 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEEC---CCEECH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCC---CCCcCH
Confidence 4899999999999999999999999999999977 9999865 33332221111000 001111110 001122
Q ss_pred hHHH-------HH----HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCC
Q 009897 104 NKVM-------EY----LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVS 172 (523)
Q Consensus 104 ~~~~-------~y----l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 172 (523)
..+. ++ +..+.++.++ .+..++.+. ++ . ++|++. +.
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-~~--~------------------------~~v~v~-g~--- 128 (464)
T 2eq6_A 82 KKLGGWRDQVVKKLTGGVGTLLKGNGV--ELLRGFARL-VG--P------------------------KEVEVG-GE--- 128 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESCEEE-EE--T------------------------TEEEET-TE---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEeeeEEE-cc--C------------------------CEEEEc-cE---
Confidence 2222 22 2344555666 666665442 32 1 345554 33
Q ss_pred cceeEEEeCEEEEeeeecCCCCCCCC-CCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcC
Q 009897 173 SATEAYQVDFVILCIGRYSDLPNTPD-FPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNG 251 (523)
Q Consensus 173 ~~~~~~~~d~vVlAtG~~s~~p~~p~-~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~ 251 (523)
++.||+||+|||+. |..|+ +| +. +.++++.++... ....+++|+|||+|.+|+|+|..+++.+.
T Consensus 129 ----~~~~d~lViATGs~---p~~p~gi~---~~----~~v~~~~~~~~l-~~~~~~~vvViGgG~~g~e~A~~l~~~g~ 193 (464)
T 2eq6_A 129 ----RYGAKSLILATGSE---PLELKGFP---FG----EDVWDSTRALKV-EEGLPKRLLVIGGGAVGLELGQVYRRLGA 193 (464)
T ss_dssp ----EEEEEEEEECCCEE---ECCBTTBC---CS----SSEECHHHHTCG-GGCCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred ----EEEeCEEEEcCCCC---CCCCCCCC---CC----CcEEcHHHHHhh-hhhcCCEEEEECCCHHHHHHHHHHHHCCC
Confidence 79999999999965 67765 66 42 145666555443 22247999999999999999999999875
Q ss_pred CccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCC
Q 009897 252 VRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIP 331 (523)
Q Consensus 252 ~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p 331 (523)
+ ||++.+.+. ++|..+
T Consensus 194 ~---Vtlv~~~~~-~l~~~~------------------------------------------------------------ 209 (464)
T 2eq6_A 194 E---VTLIEYMPE-ILPQGD------------------------------------------------------------ 209 (464)
T ss_dssp E---EEEECSSSS-SSTTSC------------------------------------------------------------
T ss_pred e---EEEEEcCCc-cccccC------------------------------------------------------------
Confidence 4 999998765 333221
Q ss_pred CCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC--c--EEEc-C--Cc--eeeeccEEEEecCCCCCccc
Q 009897 332 GHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN--G--LVID-G--ET--TPLVTDIVIFATGYKSDEKL 401 (523)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~--~--v~l~-d--G~--~~~~~D~VI~ATG~~~~~~l 401 (523)
+.+.+.+.+.+++.+|+++.+. +.+++.+ + +.+. + |+ + +++|.||+|||++|+..+
T Consensus 210 -------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 210 -------------PETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEE-VVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp -------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEE-EEESEEEECSCEEESCTT
T ss_pred -------------HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeE-EEcCEEEECCCcccCCCC
Confidence 0011112234445567777764 6666542 2 5665 6 76 6 899999999999998764
Q ss_pred c--ccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCCC-CchhhHHHHHHHHHHHHcCCC
Q 009897 402 K--NIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADSP-SILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 402 ~--~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
+ +..+.... +..+.. . ..+.++.|+||++|.+... ...+.+..|++.+|..+.|..
T Consensus 276 l~l~~~g~~~~~~G~i~v---d---~~~~t~~~~Iya~GD~~~~~~l~~~A~~~g~~aa~~i~g~~ 335 (464)
T 2eq6_A 276 LGLEKAGVKVDERGFIRV---N---ARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKD 335 (464)
T ss_dssp SSHHHHTCCBCTTSCBCC---C---TTCBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCC
T ss_pred CChhhcCceecCCCCEEE---C---CCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 2 11111100 111111 1 2234689999999988653 346789999999999998853
No 57
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.93 E-value=1.2e-26 Score=243.11 Aligned_cols=297 Identities=16% Similarity=0.195 Sum_probs=185.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCc----eeeCCCCCCCCCCCCCCCh
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSF----YQFSDFAWPNSVTETFPDH 103 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 103 (523)
.+||+|||||++|+++|..|++.|.+|+|||++ .+||+|.+ +.|...+...... .....+.+... ....+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 80 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS--GGTLDW 80 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC-----CCH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC--CCCcCH
Confidence 479999999999999999999999999999997 79999975 3343221111000 01111111110 112233
Q ss_pred hHHHHHHHHH-----------HHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCC
Q 009897 104 NKVMEYLQAY-----------AAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVS 172 (523)
Q Consensus 104 ~~~~~yl~~~-----------~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 172 (523)
..+.++.+.+ .++.++ .+..+ ++..++. +.|++ ++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i~~--------------------------~~v~~-~g~--- 127 (463)
T 2r9z_A 81 PRLVAGRDRYIGAINSFWDGYVERLGI--TRVDG-HARFVDA--------------------------HTIEV-EGQ--- 127 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEEEET--------------------------TEEEE-TTE---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEe-EEEEccC--------------------------CEEEE-CCE---
Confidence 4444443333 344455 45554 3333321 45665 333
Q ss_pred cceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCC
Q 009897 173 SATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGV 252 (523)
Q Consensus 173 ~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~ 252 (523)
++.||+||+|||+. |..|++| |.+. ++++.++... ...+++|+|||+|.+|+|+|..+++.+.+
T Consensus 128 ----~~~~d~lviAtGs~---p~~p~i~---G~~~----~~~~~~~~~~--~~~~~~vvVvGgG~~g~e~A~~l~~~G~~ 191 (463)
T 2r9z_A 128 ----RLSADHIVIATGGR---PIVPRLP---GAEL----GITSDGFFAL--QQQPKRVAIIGAGYIGIELAGLLRSFGSE 191 (463)
T ss_dssp ----EEEEEEEEECCCEE---ECCCSCT---TGGG----SBCHHHHHHC--SSCCSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred ----EEEcCEEEECCCCC---CCCCCCC---Cccc----eecHHHHhhh--hccCCEEEEECCCHHHHHHHHHHHhcCCE
Confidence 78999999999964 7788888 6532 2333322211 12378999999999999999999998754
Q ss_pred ccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCC
Q 009897 253 RYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPG 332 (523)
Q Consensus 253 ~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~ 332 (523)
||++.|.+. +++..+ .
T Consensus 192 ---Vtlv~~~~~-~l~~~~-----------------------------------~------------------------- 207 (463)
T 2r9z_A 192 ---VTVVALEDR-LLFQFD-----------------------------------P------------------------- 207 (463)
T ss_dssp ---EEEECSSSS-SSTTSC-----------------------------------H-------------------------
T ss_pred ---EEEEEcCCc-cccccC-----------------------------------H-------------------------
Confidence 999998765 222211 0
Q ss_pred CcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC----cEEEcCCc-eeeeccEEEEecCCCCCcccc--cc
Q 009897 333 HSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN----GLVIDGET-TPLVTDIVIFATGYKSDEKLK--NI 404 (523)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~----~v~l~dG~-~~~~~D~VI~ATG~~~~~~l~--~~ 404 (523)
.+.+.+.+.+++.+|+++.+. +.+++.+ .|+++||+ + +++|.||+|||++|+...+ +.
T Consensus 208 -------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~-i~~D~vv~a~G~~p~~~~l~~~~ 273 (463)
T 2r9z_A 208 -------------LLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRL-EGFDSVIWAVGRAPNTRDLGLEA 273 (463)
T ss_dssp -------------HHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEE-EEESEEEECSCEEESCTTSCHHH
T ss_pred -------------HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEE-EEcCEEEECCCCCcCCCCCCchh
Confidence 001112233445567777775 6777542 37788998 7 9999999999999987521 11
Q ss_pred ccchhh-hhhhcCCCcccccccccCCCCCeEEecccCC-CCchhhHHHHHHHHHHHHcCC
Q 009897 405 FKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADS-PSILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 405 ~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~-~~~~~~ae~Qa~~~a~~l~g~ 462 (523)
.+...- +..+.. . ..+.++.||||++|.+.. ....+.+..|++.+|..+.|.
T Consensus 274 ~g~~~~~~G~i~v---d---~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 327 (463)
T 2r9z_A 274 AGIEVQSNGMVPT---D---AYQNTNVPGVYALGDITGRDQLTPVAIAAGRRLAERLFDG 327 (463)
T ss_dssp HTCCCCTTSCCCC---C---TTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred cCCccCCCCCEeE---C---CCCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCC
Confidence 111100 111111 1 223468999999998864 345678999999999999875
No 58
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.93 E-value=1.6e-26 Score=243.24 Aligned_cols=300 Identities=17% Similarity=0.217 Sum_probs=186.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcC----ceeeCCCCCCCCCCCCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKS----FYQFSDFAWPNSVTETFPD 102 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 102 (523)
+.+||+|||||++|+++|..|++.|++|+|||++ .+||+|.. ++|...+..... ...+..+.++. .....+
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~--~~~~~~ 95 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPS--CEGKFN 95 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCC--CCCCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccC--CCCccC
Confidence 3489999999999999999999999999999975 79999876 344332211111 01112222221 122345
Q ss_pred hhHHHHHHHHHHHH-----------hCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccC
Q 009897 103 HNKVMEYLQAYAAH-----------FNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNV 171 (523)
Q Consensus 103 ~~~~~~yl~~~~~~-----------~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 171 (523)
...+.+|.+.+.+. .++ .+..+ ++..++ ...+.|.. ++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~~~------------------------~~~~~v~~-~g~-- 145 (478)
T 3dk9_A 96 WRVIKEKRDAYVSRLNAIYQNNLTKSHI--EIIRG-HAAFTS------------------------DPKPTIEV-SGK-- 145 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEECS------------------------CSSCEEEE-TTE--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEEe-EEEEee------------------------CCeEEEEE-CCE--
Confidence 55556555544433 233 33332 222111 13366663 333
Q ss_pred CcceeEEEeCEEEEeeeecCCCCCCC---CCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHH
Q 009897 172 SSATEAYQVDFVILCIGRYSDLPNTP---DFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVAN 248 (523)
Q Consensus 172 ~~~~~~~~~d~vVlAtG~~s~~p~~p---~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~ 248 (523)
++.||+||+|||+. |..| ++| |.+ ..+++.++... ...+++|+|||+|.+|+|+|..+++
T Consensus 146 -----~~~~d~lviAtG~~---p~~p~~~~i~---G~~----~~~~~~~~~~~--~~~~~~vvViGgG~~g~E~A~~l~~ 208 (478)
T 3dk9_A 146 -----KYTAPHILIATGGM---PSTPHESQIP---GAS----LGITSDGFFQL--EELPGRSVIVGAGYIAVEMAGILSA 208 (478)
T ss_dssp -----EEECSCEEECCCEE---ECCCCTTTST---TGG----GSBCHHHHTTC--CSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred -----EEEeeEEEEccCCC---CCCCCcCCCC---CCc----eeEchHHhhch--hhcCccEEEECCCHHHHHHHHHHHH
Confidence 79999999999964 7777 777 755 12333332222 1237999999999999999999999
Q ss_pred hcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCC
Q 009897 249 RNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYN 328 (523)
Q Consensus 249 ~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (523)
.+.+ ||++.|.+..+ +..+ .
T Consensus 209 ~g~~---Vtlv~~~~~~l-~~~d-----------------------------------~--------------------- 228 (478)
T 3dk9_A 209 LGSK---TSLMIRHDKVL-RSFD-----------------------------------S--------------------- 228 (478)
T ss_dssp TTCE---EEEECSSSSSC-TTSC-----------------------------------H---------------------
T ss_pred cCCe---EEEEEeCCccc-cccC-----------------------------------H---------------------
Confidence 8754 99999977632 3321 0
Q ss_pred CCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEec--Cc----EEEcC---C----ceeeeccEEEEecC
Q 009897 329 MIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCK--NG----LVIDG---E----TTPLVTDIVIFATG 394 (523)
Q Consensus 329 l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~--~~----v~l~d---G----~~~~~~D~VI~ATG 394 (523)
.+.+.+.+.+++.+|+++.+. +.+++. ++ +.+.+ | .+ +++|.||+|||
T Consensus 229 -----------------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~-~~~D~vi~a~G 290 (478)
T 3dk9_A 229 -----------------MISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMI-PDVDCLLWAIG 290 (478)
T ss_dssp -----------------HHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEE-EEESEEEECSC
T ss_pred -----------------HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceE-EEcCEEEEeec
Confidence 011112234445567777764 666653 23 55554 2 45 89999999999
Q ss_pred CCCCccc--cccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCC-CCchhhHHHHHHHHHHHHcCC
Q 009897 395 YKSDEKL--KNIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADS-PSILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 395 ~~~~~~l--~~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~-~~~~~~ae~Qa~~~a~~l~g~ 462 (523)
++|+... ++.++...- +..+.. ...+.++.|+||++|.+.. +...+.+..|++.+|..+.|.
T Consensus 291 ~~p~~~~l~l~~~g~~~~~~G~i~v------d~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 291 RVPNTKDLSLNKLGIQTDDKGHIIV------DEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp EEESCTTSCGGGGTCCBCTTCCBCC------CTTCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHHSC
T ss_pred cccCCCCCCchhcCCeeCCCCCEee------CCCcccCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHcCC
Confidence 9998762 221111100 111111 1223568999999998773 445688999999999999876
No 59
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.93 E-value=3.1e-26 Score=239.64 Aligned_cols=302 Identities=16% Similarity=0.182 Sum_probs=188.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCce----eeCCCCCCCCCCCCCCCh
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFY----QFSDFAWPNSVTETFPDH 103 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 103 (523)
.+||+|||||++|+++|..|++.|++|+|||+. .+||+|.. +.|...+......+ .+..+.++.. ....+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~--~~~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAE--NVTIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECC--SCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccC--CCccCH
Confidence 479999999999999999999999999999997 89999864 23322111000000 0000000000 000111
Q ss_pred h-----------HHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCC
Q 009897 104 N-----------KVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVS 172 (523)
Q Consensus 104 ~-----------~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 172 (523)
. .+.+++.+.+++.++ .+..++.+. ++. +.+.|++.++.
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-id~------------------------~~v~V~~~~G~--- 129 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKV--EIVKGEAYF-VDA------------------------NTVRVVNGDSA--- 129 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEESEEEE-EET------------------------TEEEEEETTEE---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEEE-ccC------------------------CeEEEEeCCCc---
Confidence 1 233445566666777 677776543 332 34677654441
Q ss_pred cceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCC
Q 009897 173 SATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGV 252 (523)
Q Consensus 173 ~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~ 252 (523)
.++.||+||+|||+. |..|+++ |.+. .++++.+.... ...+++|+|||+|.+|+|+|..+++.+.+
T Consensus 130 ---~~i~~d~lViATGs~---p~~~~~~---g~~~---~v~~~~~~~~~--~~~~~~vvViGgG~~g~e~A~~l~~~g~~ 195 (455)
T 1ebd_A 130 ---QTYTFKNAIIATGSR---PIELPNF---KFSN---RILDSTGALNL--GEVPKSLVVIGGGYIGIELGTAYANFGTK 195 (455)
T ss_dssp ---EEEECSEEEECCCEE---ECCBTTB---CCCS---SEECHHHHHTC--SSCCSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred ---EEEEeCEEEEecCCC---CCCCCCC---Cccc---eEecHHHHhcc--ccCCCeEEEECCCHHHHHHHHHHHHcCCc
Confidence 278999999999965 6777777 6442 25555433221 12479999999999999999999998754
Q ss_pred ccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCC
Q 009897 253 RYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPG 332 (523)
Q Consensus 253 ~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~ 332 (523)
||++.+.+. ++|..+ .
T Consensus 196 ---Vtlv~~~~~-~l~~~~-----------------------------------~------------------------- 211 (455)
T 1ebd_A 196 ---VTILEGAGE-ILSGFE-----------------------------------K------------------------- 211 (455)
T ss_dssp ---EEEEESSSS-SSTTSC-----------------------------------H-------------------------
T ss_pred ---EEEEEcCCc-cccccC-----------------------------------H-------------------------
Confidence 999999765 233221 0
Q ss_pred CcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC--cE--EEc---CCceeeeccEEEEecCCCCCcccc--
Q 009897 333 HSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN--GL--VID---GETTPLVTDIVIFATGYKSDEKLK-- 402 (523)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~--~v--~l~---dG~~~~~~D~VI~ATG~~~~~~l~-- 402 (523)
.+...+.+.+++.+|+++.+. +.+++++ ++ .+. ++++ +++|.||+|||++|+..++
T Consensus 212 -------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~-~~~D~vv~a~G~~p~~~~l~~ 277 (455)
T 1ebd_A 212 -------------QMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKT-IDADYVLVTVGRRPNTDELGL 277 (455)
T ss_dssp -------------HHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEE-EEESEEEECSCEEESCSSSST
T ss_pred -------------HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeE-EEcCEEEECcCCCcccCcCCh
Confidence 001112233444567777764 6666532 23 443 4456 9999999999999987652
Q ss_pred ccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCCC-CchhhHHHHHHHHHHHHcCC
Q 009897 403 NIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADSP-SILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 403 ~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-~~~~~ae~Qa~~~a~~l~g~ 462 (523)
+..+...- +..+.. . ..+.++.|+||++|.+... ...+.+..|++.+|..+.|+
T Consensus 278 ~~~g~~~~~~G~i~v---d---~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (455)
T 1ebd_A 278 EQIGIKMTNRGLIEV---D---QQCRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAGH 333 (455)
T ss_dssp TTTTCCBCTTSCBCC---C---TTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTSC
T ss_pred hhcCCccCCCCCEee---C---CCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 21111100 011111 1 2234689999999988654 34678999999999999886
No 60
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.93 E-value=1.2e-27 Score=252.55 Aligned_cols=306 Identities=16% Similarity=0.166 Sum_probs=186.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCc----eeeCCCCCCCCCCCCCCChh
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSF----YQFSDFAWPNSVTETFPDHN 104 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 104 (523)
+||+||||||+|++||..|++.|.+|+|||++ .+||+|.+ ++|+..+...... ..+..+.++. .....+..
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~--~~~~~~~~ 85 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQV--DRISVNGK 85 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEEC--SEEEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCC--CCCccCHH
Confidence 79999999999999999999999999999996 59999875 4554333211110 0111122211 11123556
Q ss_pred HHHHHHHHHHHHhCCC--CceE--eccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEe
Q 009897 105 KVMEYLQAYAAHFNLF--PSIK--FDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQV 180 (523)
Q Consensus 105 ~~~~yl~~~~~~~~l~--~~i~--~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 180 (523)
++.+++.++.+++... ..+. .+..+ +.... .| .+.++|.+.++. ++.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~g~a-----------------~~--~~~~~v~~~~~~-------~~~~ 137 (492)
T 3ic9_A 86 AVMKRIQTERDRFVGFVVESVESFDEQDK--IRGFA-----------------KF--LDEHTLQVDDHS-------QVIA 137 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGGE--EESCE-----------------EE--EETTEEEETTTE-------EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCeeE--EEEEE-----------------EE--ecCCEEEEcCCc-------EEEe
Confidence 7777776666554310 0000 00011 11000 00 023567775544 8999
Q ss_pred CEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEE
Q 009897 181 DFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLF 260 (523)
Q Consensus 181 d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~ 260 (523)
|+||+|||+. |..|+++ +.. ...++++.+.... ...+++|+|||+|.+|+|+|..+++.+.+ ||++.
T Consensus 138 d~lViATGs~---p~~p~~~---~~~--~~~v~t~~~~~~~--~~~~k~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~ 204 (492)
T 3ic9_A 138 KRIVIATGSR---PNYPEFL---AAA--GSRLLTNDNLFEL--NDLPKSVAVFGPGVIGLELGQALSRLGVI---VKVFG 204 (492)
T ss_dssp EEEEECCCEE---CCCCHHH---HTT--GGGEECHHHHTTC--SSCCSEEEEESSCHHHHHHHHHHHHTTCE---EEEEC
T ss_pred CEEEEccCCC---CcCCCCC---Ccc--CCcEEcHHHHhhh--hhcCCeEEEECCCHHHHHHHHHHHHcCCe---EEEEE
Confidence 9999999954 7787755 322 2235555443332 23489999999999999999999998754 99999
Q ss_pred eeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCccccccc
Q 009897 261 KTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQIS 340 (523)
Q Consensus 261 r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 340 (523)
|.+.. +|..+ .
T Consensus 205 ~~~~~-l~~~d-----------------------------------~--------------------------------- 215 (492)
T 3ic9_A 205 RSGSV-ANLQD-----------------------------------E--------------------------------- 215 (492)
T ss_dssp CTTCC-TTCCC-----------------------------------H---------------------------------
T ss_pred ECCcc-cccCC-----------------------------------H---------------------------------
Confidence 98762 23321 0
Q ss_pred CcceeecCcchhhhccCCCEEEEecC-ceEEec--Cc--EEEc--CC--ceeeeccEEEEecCCCCCccccc--cccchh
Q 009897 341 SCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCK--NG--LVID--GE--TTPLVTDIVIFATGYKSDEKLKN--IFKSTY 409 (523)
Q Consensus 341 ~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~--~~--v~l~--dG--~~~~~~D~VI~ATG~~~~~~l~~--~~~~~~ 409 (523)
.+.+.+.+.+++. |+++.+. +.+++. ++ +.+. +| .+ +++|.||+|||++|+..++. ..+..
T Consensus 216 -----~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~-i~~D~Vi~a~G~~p~~~~l~l~~~gl~- 287 (492)
T 3ic9_A 216 -----EMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTT-ESFQYVLAATGRKANVDKLGLENTSIE- 287 (492)
T ss_dssp -----HHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEE-EEESEEEECSCCEESCSSSCGGGSCCC-
T ss_pred -----HHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEE-EECCEEEEeeCCccCCCCCChhhcCCE-
Confidence 0111122334444 6777664 666653 23 4454 67 55 99999999999999987532 11111
Q ss_pred hhhhhcCCCccccc-ccccCCCCCeEEecccCCCC-chhhHHHHHHHHHHHHcC
Q 009897 410 FQKQITGSSAPLYR-EGIHPQIPQLAILGYADSPS-ILRTTEMRSKCLAHFLAG 461 (523)
Q Consensus 410 l~~~~~~~~~~ly~-~~~~~~~p~l~~iG~~~~~~-~~~~ae~Qa~~~a~~l~g 461 (523)
+++ ....... ..+.++.|+||++|.+.... ..+.+..|++.+|..+.+
T Consensus 288 ~~~----~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 288 LDK----KNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp BCT----TCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHHH
T ss_pred ECC----CCCEeECcccccCCCCCEEEEEecCCCCccHHHHHHHHHHHHHHHcC
Confidence 110 0001111 23446889999999876543 457899999999998876
No 61
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.93 E-value=4.3e-26 Score=239.56 Aligned_cols=307 Identities=16% Similarity=0.199 Sum_probs=191.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCcee-----eC--CCCCCC---CCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFYQ-----FS--DFAWPN---SVT 97 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~~-----~~--~~~~~~---~~~ 97 (523)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||+|.. +.|+..+......+. +. ..+... .+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLA 85 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 479999999999999999999999999999999899999875 233221110000000 00 000000 000
Q ss_pred CCCCCh----hHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCc
Q 009897 98 ETFPDH----NKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSS 173 (523)
Q Consensus 98 ~~~~~~----~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 173 (523)
..+... +.+.+++...+++.++ .+++++.+. ++. +.+.|.+.++
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-~~~------------------------~~~~v~~~~G----- 133 (470)
T 1dxl_A 86 AMMGQKDKAVSNLTRGIEGLFKKNKV--TYVKGYGKF-VSP------------------------SEISVDTIEG----- 133 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC--EEEESCEEE-EET------------------------TEEEECCSSS-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEEE-ecC------------------------CEEEEEeCCC-----
Confidence 000011 1233345566677787 778876553 332 3466655443
Q ss_pred ceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCc
Q 009897 174 ATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVR 253 (523)
Q Consensus 174 ~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~ 253 (523)
+..++.||+||+|||+. |..|+++ |.+.. .++++.+.... ...+++|+|||+|.+|+|+|..+++.+.+
T Consensus 134 ~~~~i~~d~lIiAtGs~---p~~p~~~---g~~~~--~v~~~~~~~~~--~~~~~~vvViGgG~~g~e~A~~l~~~g~~- 202 (470)
T 1dxl_A 134 ENTVVKGKHIIIATGSD---VKSLPGV---TIDEK--KIVSSTGALAL--SEIPKKLVVIGAGYIGLEMGSVWGRIGSE- 202 (470)
T ss_dssp CCEEEECSEEEECCCEE---ECCBTTB---CCCSS--SEECHHHHTTC--SSCCSEEEESCCSHHHHHHHHHHHHHTCE-
T ss_pred ceEEEEcCEEEECCCCC---CCCCCCC---CCCcc--cEEeHHHhhhh--hhcCCeEEEECCCHHHHHHHHHHHHcCCc-
Confidence 11379999999999965 6777777 64421 35555443322 12479999999999999999999998754
Q ss_pred cCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCC
Q 009897 254 YPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGH 333 (523)
Q Consensus 254 ~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~ 333 (523)
||++.|.+. ++|..+ .
T Consensus 203 --Vtli~~~~~-~l~~~~-----------------------------------~-------------------------- 218 (470)
T 1dxl_A 203 --VTVVEFASE-IVPTMD-----------------------------------A-------------------------- 218 (470)
T ss_dssp --EEEECSSSS-SSTTSC-----------------------------------H--------------------------
T ss_pred --EEEEEcCCc-cccccc-----------------------------------H--------------------------
Confidence 999999875 233221 0
Q ss_pred cccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecCc----EEEc---CC--ceeeeccEEEEecCCCCCcccc-
Q 009897 334 SFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNG----LVID---GE--TTPLVTDIVIFATGYKSDEKLK- 402 (523)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~----v~l~---dG--~~~~~~D~VI~ATG~~~~~~l~- 402 (523)
.+.+.+.+.+++.+|+++.+. +.++++++ +.+. +| ++ +++|.||+|+|++|+..++
T Consensus 219 ------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~G~~p~~~~l~ 285 (470)
T 1dxl_A 219 ------------EIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTI-IEADVVLVSAGRTPFTSGLN 285 (470)
T ss_dssp ------------HHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEE-EEESEEECCCCEEECCTTSC
T ss_pred ------------HHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceE-EECCEEEECCCCCcCCCCCC
Confidence 001112233444556677664 66776432 4444 55 45 9999999999999997652
Q ss_pred -ccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCCC-CchhhHHHHHHHHHHHHcCC
Q 009897 403 -NIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADSP-SILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 403 -~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-~~~~~ae~Qa~~~a~~l~g~ 462 (523)
+.++...- +..+.. . ..+.++.|+||++|.+... ...+.+..|++.+|..+.|+
T Consensus 286 ~~~~gl~~~~~G~i~v---d---~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 342 (470)
T 1dxl_A 286 LDKIGVETDKLGRILV---N---ERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGK 342 (470)
T ss_dssp CTTTTCCBCSSSCBCC---C---TTCBCSSTTEEECSTTSSSCCCHHHHHHHHHHHHHHHTTS
T ss_pred chhcCCccCCCCCEeE---C---cCCccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 21211100 011111 1 1234689999999988654 34678999999999999886
No 62
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.93 E-value=2.1e-26 Score=242.44 Aligned_cols=305 Identities=15% Similarity=0.179 Sum_probs=187.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCce-----eeCCCCCCCCCCCCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFY-----QFSDFAWPNSVTETFPD 102 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 102 (523)
.+||+|||||++|+++|..|++.|++|+|||+++.+||+|.. +.|+..+......+ .+..+.++.. .....+
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~-~~~~~~ 83 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVN-GDIKIN 83 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEEC-SCEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccC-CCCccC
Confidence 379999999999999999999999999999999999999875 23322211000000 0000000000 000112
Q ss_pred hhHHHHH-----------HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccC
Q 009897 103 HNKVMEY-----------LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNV 171 (523)
Q Consensus 103 ~~~~~~y-----------l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 171 (523)
..++..+ +...+++.++ .+++++.+.. + .+.+.|.+.++.
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~~---~----------------------~~~v~V~~~~G~-- 134 (478)
T 1v59_A 84 VANFQKAKDDAVKQLTGGIELLFKKNKV--TYYKGNGSFE---D----------------------ETKIRVTPVDGL-- 134 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESEEEES---S----------------------SSEEEEECCTTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEEEc---c----------------------CCeEEEEecCCC--
Confidence 2333222 3445566677 6777766541 2 134666654431
Q ss_pred CcceeE------EEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCc-cEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHH
Q 009897 172 SSATEA------YQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDG-KVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAA 244 (523)
Q Consensus 172 ~~~~~~------~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g-~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~ 244 (523)
..+ +.||+||+|||+. |. .+| |.+ +.+ .++++.+...... .+++|+|||+|.+|+|+|.
T Consensus 135 ---~~~~~~~~~i~~d~lViAtGs~---p~--~~~---g~~-~~~~~v~~~~~~~~~~~--~~~~vvViGgG~~g~e~A~ 200 (478)
T 1v59_A 135 ---EGTVKEDHILDVKNIIVATGSE---VT--PFP---GIE-IDEEKIVSSTGALSLKE--IPKRLTIIGGGIIGLEMGS 200 (478)
T ss_dssp ---TTCCSSCEEEEEEEEEECCCEE---EC--CCT---TCC-CCSSSEECHHHHTTCSS--CCSEEEEECCSHHHHHHHH
T ss_pred ---cccccccceEEeCEEEECcCCC---CC--CCC---CCC-CCCceEEcHHHHHhhhc--cCceEEEECCCHHHHHHHH
Confidence 114 8999999999976 32 234 443 223 4555554433211 3799999999999999999
Q ss_pred HHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCc
Q 009897 245 EVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPL 324 (523)
Q Consensus 245 ~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (523)
.+++.+.+ ||++.|.+. ++|..+ .
T Consensus 201 ~l~~~g~~---Vtlv~~~~~-~l~~~~-----------------------------------~----------------- 224 (478)
T 1v59_A 201 VYSRLGSK---VTVVEFQPQ-IGASMD-----------------------------------G----------------- 224 (478)
T ss_dssp HHHHTTCE---EEEECSSSS-SSSSSC-----------------------------------H-----------------
T ss_pred HHHHcCCE---EEEEEeCCc-cccccC-----------------------------------H-----------------
Confidence 99998754 999999875 333221 0
Q ss_pred ccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEec--C----cEEEc-----CCceeeeccEEEEe
Q 009897 325 KKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCK--N----GLVID-----GETTPLVTDIVIFA 392 (523)
Q Consensus 325 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~--~----~v~l~-----dG~~~~~~D~VI~A 392 (523)
.+.+.+.+.+++.+|+++.+. +.+++. + .+++. ++++ +++|.||+|
T Consensus 225 ---------------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a 282 (478)
T 1v59_A 225 ---------------------EVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQEN-LEAEVLLVA 282 (478)
T ss_dssp ---------------------HHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEE-EEESEEEEC
T ss_pred ---------------------HHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceE-EECCEEEEC
Confidence 011112234445567777764 667654 2 25555 3456 999999999
Q ss_pred cCCCCCcc--ccccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCCC-CchhhHHHHHHHHHHHHcCC
Q 009897 393 TGYKSDEK--LKNIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADSP-SILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 393 TG~~~~~~--l~~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-~~~~~ae~Qa~~~a~~l~g~ 462 (523)
||++|+.. +++..+...- +..+.. . ..+.++.|+||++|.+... ...+.+..|++.+|..+.|.
T Consensus 283 ~G~~p~~~~l~l~~~g~~~~~~G~i~v---d---~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 350 (478)
T 1v59_A 283 VGRRPYIAGLGAEKIGLEVDKRGRLVI---D---DQFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTG 350 (478)
T ss_dssp SCEEECCTTSCTTTTTCCBCTTSCBCC---C---TTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred CCCCcCCCCCCchhcCceeCCCCCEeE---C---cCCccCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 99999875 3322221110 111111 1 2234689999999988753 34678999999999999875
No 63
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.93 E-value=4.4e-26 Score=240.36 Aligned_cols=306 Identities=15% Similarity=0.229 Sum_probs=188.3
Q ss_pred CCcEEEECCChHHHHHHHHHHH-CCCceEEEc--------cCCCCCccccc--ccCcccccCCcCce----eeCCCCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLE-NGFKPIVFE--------ARSGIGGVWSQ--TIESTKLQTPKSFY----QFSDFAWPN 94 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~-~g~~v~v~e--------~~~~~GG~w~~--~~~~~~~~~~~~~~----~~~~~~~~~ 94 (523)
.+||+|||||++|+++|..|++ .|.+|+||| +...+||+|.. ++|+..+......+ ....+.+..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 4799999999999999999999 999999999 35789999876 44543221111100 011111110
Q ss_pred CCCCC--CCChhHHHHHHHH-----------HHHHh-CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCC
Q 009897 95 SVTET--FPDHNKVMEYLQA-----------YAAHF-NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGK 160 (523)
Q Consensus 95 ~~~~~--~~~~~~~~~yl~~-----------~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (523)
. .. ..+..++.++.++ ..++. ++ .+..+ ++..++.
T Consensus 83 ~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv--~~~~g-~~~~i~~-------------------------- 131 (490)
T 1fec_A 83 D--RESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGL--TFHQG-FGALQDN-------------------------- 131 (490)
T ss_dssp C--GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTE--EEEES-EEEEEET--------------------------
T ss_pred C--CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--EEEEe-EEEEeeC--------------------------
Confidence 0 00 1122344433332 23344 55 45555 3555442
Q ss_pred eEEEEeecccCCcc-eeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCH
Q 009897 161 WNVTVQEARNVSSA-TEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSA 239 (523)
Q Consensus 161 ~~v~~~~~~~~~~~-~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg 239 (523)
.+|.+......+++ ...+.||+||+|||+. |..|++| |.+. ++++.++... ...+++|+|||+|.+|
T Consensus 132 ~~v~v~~~~~~~g~~~~~~~~d~lviAtGs~---p~~p~i~---g~~~----~~~~~~~~~~--~~~~~~vvViGgG~ig 199 (490)
T 1fec_A 132 HTVLVRESADPNSAVLETLDTEYILLATGSW---PQHLGIE---GDDL----CITSNEAFYL--DEAPKRALCVGGGYIS 199 (490)
T ss_dssp TEEEEESSSSTTSCEEEEEEEEEEEECCCEE---ECCCCSB---TGGG----CBCHHHHTTC--SSCCSEEEEECSSHHH
T ss_pred CEEEEEeeccCCCCceEEEEcCEEEEeCCCC---CCCCCCC---Cccc----eecHHHHhhh--hhcCCeEEEECCCHHH
Confidence 13444320000010 1379999999999964 7788788 6532 2333322221 1247899999999999
Q ss_pred HHHHHHHHHh---cCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHH
Q 009897 240 VDVAAEVANR---NGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVES 316 (523)
Q Consensus 240 ~d~a~~l~~~---~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (523)
+|+|..+++. +. +||++.|.+. ++|..+
T Consensus 200 ~E~A~~l~~~~~~g~---~Vtlv~~~~~-~l~~~d--------------------------------------------- 230 (490)
T 1fec_A 200 IEFAGIFNAYKARGG---QVDLAYRGDM-ILRGFD--------------------------------------------- 230 (490)
T ss_dssp HHHHHHHHHHSCTTC---EEEEEESSSS-SSTTSC---------------------------------------------
T ss_pred HHHHHHHHhhccCcC---eEEEEEcCCC-cccccC---------------------------------------------
Confidence 9999999998 65 4999999775 333221
Q ss_pred HHHhcCCcccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC-----cEEEcCCceeeeccEEE
Q 009897 317 CLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN-----GLVIDGETTPLVTDIVI 390 (523)
Q Consensus 317 ~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~-----~v~l~dG~~~~~~D~VI 390 (523)
+.+...+.+.+++.+|+++.+. +.++..+ .|+++||++ +++|.||
T Consensus 231 ----------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~-i~~D~vv 281 (490)
T 1fec_A 231 ----------------------------SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAE-ADYDVVM 281 (490)
T ss_dssp ----------------------------HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCE-EEESEEE
T ss_pred ----------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcE-EEcCEEE
Confidence 0011122344555678888774 7777643 367789987 9999999
Q ss_pred EecCCCCCcc-c-cccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCCC-CchhhHHHHHHHHHHHHcCC
Q 009897 391 FATGYKSDEK-L-KNIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADSP-SILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 391 ~ATG~~~~~~-l-~~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-~~~~~ae~Qa~~~a~~l~g~ 462 (523)
+|||++|+.. + ++..+...- +..+.. . ..+.++.|+||++|.+... ...+.+..|++.+|..+.|.
T Consensus 282 ~a~G~~p~~~~L~l~~~gl~~~~~G~I~V---d---~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 351 (490)
T 1fec_A 282 LAIGRVPRSQTLQLEKAGVEVAKNGAIKV---D---AYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFAN 351 (490)
T ss_dssp ECSCEEESCTTSCGGGGTCCBCTTSCBCC---C---TTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred EccCCCcCccccCchhcCccCCCCCCEEE---C---CCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 9999999875 2 222211110 111111 1 1234689999999988753 35688999999999999874
No 64
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.93 E-value=8.4e-27 Score=243.40 Aligned_cols=297 Identities=16% Similarity=0.180 Sum_probs=183.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCce-----eeCCCCCCCCCCCCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFY-----QFSDFAWPNSVTETFPD 102 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 102 (523)
.+||+|||||++|+++|..|++.|.+|+|||++ .+||+|.+ +.|...+......+ ....+.+.. .....+
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~--~~~~~~ 80 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDT--TINKFN 80 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEE--EEEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccC--CCCccC
Confidence 479999999999999999999999999999997 79999975 33432211100000 000011100 000112
Q ss_pred hhHHHHHHHH-----------HHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccC
Q 009897 103 HNKVMEYLQA-----------YAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNV 171 (523)
Q Consensus 103 ~~~~~~yl~~-----------~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 171 (523)
...+.++.+. ..++.++ .+..++ +..++. +.|.+ ++.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g~-~~~i~~--------------------------~~v~~-~g~-- 128 (450)
T 1ges_A 81 WETLIASRTAYIDRIHTSYENVLGKNNV--DVIKGF-ARFVDA--------------------------KTLEV-NGE-- 128 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESC-CEEEET--------------------------TEEEE-TTE--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEecC--------------------------CEEEE-CCE--
Confidence 2333333332 2344455 455543 333331 34555 333
Q ss_pred CcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcC
Q 009897 172 SSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNG 251 (523)
Q Consensus 172 ~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~ 251 (523)
++.||+||+|||+. |..|++| |.+. ++++.++... ...+++|+|||+|.+|+|+|..+++.+.
T Consensus 129 -----~~~~d~lviAtGs~---p~~p~i~---g~~~----~~~~~~~~~~--~~~~~~vvViGgG~~g~e~A~~l~~~g~ 191 (450)
T 1ges_A 129 -----TITADHILIATGGR---PSHPDIP---GVEY----GIDSDGFFAL--PALPERVAVVGAGYIGVELGGVINGLGA 191 (450)
T ss_dssp -----EEEEEEEEECCCEE---ECCCCST---TGGG----SBCHHHHHHC--SSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred -----EEEeCEEEECCCCC---CCCCCCC---Cccc----eecHHHhhhh--hhcCCeEEEECCCHHHHHHHHHHHhcCC
Confidence 79999999999964 7888888 6532 2333322211 1237899999999999999999999875
Q ss_pred CccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCC
Q 009897 252 VRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIP 331 (523)
Q Consensus 252 ~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p 331 (523)
+ ||++.|.+. ++|..+ .
T Consensus 192 ~---Vtlv~~~~~-~l~~~~--------~--------------------------------------------------- 208 (450)
T 1ges_A 192 K---THLFEMFDA-PLPSFD--------P--------------------------------------------------- 208 (450)
T ss_dssp E---EEEECSSSS-SSTTSC--------H---------------------------------------------------
T ss_pred E---EEEEEeCCc-hhhhhh--------H---------------------------------------------------
Confidence 4 999998765 222221 0
Q ss_pred CCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC-----cEEEcCCceeeeccEEEEecCCCCCcccc--c
Q 009897 332 GHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN-----GLVIDGETTPLVTDIVIFATGYKSDEKLK--N 403 (523)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~-----~v~l~dG~~~~~~D~VI~ATG~~~~~~l~--~ 403 (523)
.+.+.+.+.+++.+|+++.+. +.+++.+ .|+++||++ +++|.||+|||++|+...+ +
T Consensus 209 --------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~-i~~D~vv~a~G~~p~~~~l~~~ 273 (450)
T 1ges_A 209 --------------MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRS-ETVDCLIWAIGREPANDNINLE 273 (450)
T ss_dssp --------------HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCE-EEESEEEECSCEEESCTTSCHH
T ss_pred --------------HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcE-EEcCEEEECCCCCcCCCCCCch
Confidence 001112233344456777664 6666542 367789987 9999999999999987521 2
Q ss_pred cccchhh-hhhhcCCCcccccccccCCCCCeEEecccCC-CCchhhHHHHHHHHHHHHcCC
Q 009897 404 IFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADS-PSILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 404 ~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~-~~~~~~ae~Qa~~~a~~l~g~ 462 (523)
..+...- +..+.. . ..+.++.|+||++|.+.. ....+.+..|++.+|..+.|.
T Consensus 274 ~~gl~~~~~g~i~v---d---~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 328 (450)
T 1ges_A 274 AAGVKTNEKGYIVV---D---KYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNN 328 (450)
T ss_dssp HHTCCBCTTSCBCC---C---TTSBCSSTTEEECSGGGTSCCCHHHHHHHHHHHHHHHHTT
T ss_pred hcCceECCCCCEeE---C---CCCccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 1111100 111111 1 223478999999998764 345678999999999999874
No 65
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.93 E-value=1.4e-25 Score=234.40 Aligned_cols=295 Identities=16% Similarity=0.223 Sum_probs=188.2
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
+||+|||||++|+++|..|++. |.+|+|||+++.++..... .+.. .... .. ....+++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-~~~~----------~~g~-~~------~~~~~~~~~ 62 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCG-IALY----------LGKE-IK------NNDPRGLFY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGG-HHHH----------HTTC-BG------GGCGGGGBS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccccc-chhh----------hcCC-cc------cCCHHHhhh
Confidence 5899999999999999999998 9999999998765422110 0000 0000 00 000111112
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
++.+..+++++ .++++++|..++... + .|.+.+.. +++..++.||+||+|||
T Consensus 63 ~~~~~~~~~gv--~~~~~~~v~~i~~~~----------------------~--~v~v~~~~--~g~~~~~~~d~lviAtG 114 (452)
T 2cdu_A 63 SSPEELSNLGA--NVQMRHQVTNVDPET----------------------K--TIKVKDLI--TNEEKTEAYDKLIMTTG 114 (452)
T ss_dssp CCHHHHHHTTC--EEEESEEEEEEEGGG----------------------T--EEEEEETT--TCCEEEEECSEEEECCC
T ss_pred cCHHHHHHcCC--EEEeCCEEEEEEcCC----------------------C--EEEEEecC--CCceEEEECCEEEEccC
Confidence 22344566787 788899999998754 2 34444311 11123799999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhh----hcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 189 RYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAE----LINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 189 ~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~----~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
+. |..|++| |.+. ..+++...+.+... ...+++|+|||+|.+|+|+|..+++.+.+ ||++.|.+.
T Consensus 115 s~---p~~p~i~---g~~~--~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~ 183 (452)
T 2cdu_A 115 SK---PTVPPIP---GIDS--SRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYN---VNLIDGHER 183 (452)
T ss_dssp EE---ECCCCCT---TTTS--TTEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSS
T ss_pred CC---cCCCCCC---CCCC--CCEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCE---EEEEEcCCc
Confidence 54 7888888 6642 13566554433211 12589999999999999999999988754 999998765
Q ss_pred eEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcce
Q 009897 265 WMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMF 344 (523)
Q Consensus 265 ~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 344 (523)
++|... +
T Consensus 184 -~l~~~~--~---------------------------------------------------------------------- 190 (452)
T 2cdu_A 184 -VLYKYF--D---------------------------------------------------------------------- 190 (452)
T ss_dssp -TTTTTS--C----------------------------------------------------------------------
T ss_pred -hhhhhh--h----------------------------------------------------------------------
Confidence 222110 0
Q ss_pred eecCcchhhhccCCCEEEEecC-ceEEec-Cc-E--EEcCCceeeeccEEEEecCCCCCccccccccchh-hhhhhcCCC
Q 009897 345 TVLPRNFYDRVQGGGLSLMKSR-SFTFCK-NG-L--VIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTY-FQKQITGSS 418 (523)
Q Consensus 345 ~~~~~~~~~~~~~g~v~v~~~~-i~~~~~-~~-v--~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~-l~~~~~~~~ 418 (523)
+.+.+.+.+.+++.+|+++.+. +.+++. ++ + +..+|++ +++|.||+|||++|+..+++.. ... -+..+..
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~-i~~D~vv~a~G~~p~~~ll~~~-l~~~~~G~i~V-- 266 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKE-IKSDIAILCIGFRPNTELLKGK-VAMLDNGAIIT-- 266 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCE-EEESEEEECCCEEECCGGGTTT-SCBCTTSCBCC--
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCE-EECCEEEECcCCCCCHHHHHHh-hhcCCCCCEEE--
Confidence 0011122344555667888774 777764 33 3 3447877 9999999999999997654321 110 0111111
Q ss_pred cccccccccCCCCCeEEecccCCC-----------CchhhHHHHHHHHHHHHcCCC
Q 009897 419 APLYREGIHPQIPQLAILGYADSP-----------SILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 419 ~~ly~~~~~~~~p~l~~iG~~~~~-----------~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
..| +.++.||||++|.+... ..++.|..|++.+|..+.|..
T Consensus 267 -d~~---~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 318 (452)
T 2cdu_A 267 -DEY---MHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDK 318 (452)
T ss_dssp -CTT---SBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCC
T ss_pred -CCC---cCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCC
Confidence 122 34589999999987652 346789999999999998863
No 66
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.93 E-value=6.5e-26 Score=240.70 Aligned_cols=305 Identities=14% Similarity=0.209 Sum_probs=185.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC--------CCCccccc--ccCcccccCCcCc----eeeCCCCCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS--------GIGGVWSQ--TIESTKLQTPKSF----YQFSDFAWPNS 95 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~--------~~GG~w~~--~~~~~~~~~~~~~----~~~~~~~~~~~ 95 (523)
.+||+||||||+|++||..|++.|.+|+|||+.+ .+||+|.+ ++|...+..+... ..+..+.+...
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~ 111 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVE 111 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccC
Confidence 4899999999999999999999999999999854 79999987 4554433221111 11112222211
Q ss_pred CCCCCCChhHHHHHHHHHHHHh-----------CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEE
Q 009897 96 VTETFPDHNKVMEYLQAYAAHF-----------NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVT 164 (523)
Q Consensus 96 ~~~~~~~~~~~~~yl~~~~~~~-----------~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 164 (523)
.....+...+.+|.+.+.+++ ++ .+. ..++..++. ..+.|.
T Consensus 112 -~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV--~~i-~g~a~~~d~------------------------~~v~v~ 163 (519)
T 3qfa_A 112 -ETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKV--VYE-NAYGQFIGP------------------------HRIKAT 163 (519)
T ss_dssp -SSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEE-CSEEEEEET------------------------TEEEEE
T ss_pred -CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEE-EEEEEEeeC------------------------CEEEEE
Confidence 122345566666666554432 22 222 223333332 224443
Q ss_pred EeecccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHH
Q 009897 165 VQEARNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAA 244 (523)
Q Consensus 165 ~~~~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~ 244 (523)
..++ +.+++.||+||||||+ .|..|++| |.+.+ ++++.++... ...+++|+|||+|.+|+|+|.
T Consensus 164 ~~~g-----~~~~i~~d~lViATGs---~p~~p~i~---G~~~~---~~t~~~~~~l--~~~~~~vvVIGgG~ig~E~A~ 227 (519)
T 3qfa_A 164 NNKG-----KEKIYSAERFLIATGE---RPRYLGIP---GDKEY---CISSDDLFSL--PYCPGKTLVVGASYVALECAG 227 (519)
T ss_dssp CTTC-----CCCEEEEEEEEECCCE---EECCCCCT---THHHH---CBCHHHHTTC--SSCCCSEEEECCSHHHHHHHH
T ss_pred cCCC-----CEEEEECCEEEEECCC---CcCCCCCC---CccCc---eEcHHHHhhh--hhcCCeEEEECCcHHHHHHHH
Confidence 3222 2347999999999995 47888888 75432 2333333222 134678999999999999999
Q ss_pred HHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCc
Q 009897 245 EVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPL 324 (523)
Q Consensus 245 ~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (523)
.+++.+.+ ||++.|. . +++..+ .
T Consensus 228 ~l~~~G~~---Vtlv~~~-~-~l~~~d-----------------------------------~----------------- 250 (519)
T 3qfa_A 228 FLAGIGLD---VTVMVRS-I-LLRGFD-----------------------------------Q----------------- 250 (519)
T ss_dssp HHHHTTCC---EEEEESS-C-SSTTSC-----------------------------------H-----------------
T ss_pred HHHHcCCe---EEEEecc-c-ccccCC-----------------------------------H-----------------
Confidence 99998754 9999884 2 333321 0
Q ss_pred ccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ce---EEec---CcEE----EcCCce--eeeccEEEE
Q 009897 325 KKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SF---TFCK---NGLV----IDGETT--PLVTDIVIF 391 (523)
Q Consensus 325 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~---~~~~---~~v~----l~dG~~--~~~~D~VI~ 391 (523)
.+.+.+.+.+++.+|+++.+. +. .++. +++. ..+|.+ .+++|.||+
T Consensus 251 ---------------------~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~ 309 (519)
T 3qfa_A 251 ---------------------DMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVML 309 (519)
T ss_dssp ---------------------HHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEE
T ss_pred ---------------------HHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEE
Confidence 011112233445566776653 33 3332 2222 235532 268999999
Q ss_pred ecCCCCCcccccc--ccchhh--hhhhcCCCcccccccccCCCCCeEEecccC--CCCchhhHHHHHHHHHHHHcCC
Q 009897 392 ATGYKSDEKLKNI--FKSTYF--QKQITGSSAPLYREGIHPQIPQLAILGYAD--SPSILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 392 ATG~~~~~~l~~~--~~~~~l--~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~--~~~~~~~ae~Qa~~~a~~l~g~ 462 (523)
|||++|+..++.+ .+.... ...+.. . ..+.++.||||++|.+. .....+.+..|++.+|..+.|.
T Consensus 310 a~G~~p~~~~l~l~~~gl~~~~~~G~I~V---d---~~~~Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 310 AIGRDACTRKIGLETVGVKINEKTGKIPV---T---DEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp CSCEEESCSSSCSTTTTCCCCTTTCCBCC---C---TTSBCSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHSC
T ss_pred ecCCcccCCCCChhhcCcEEcCCCCeEee---C---CCCccCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 9999998764321 111110 011111 1 22346899999999876 2445688999999999998875
No 67
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.93 E-value=1.8e-26 Score=241.47 Aligned_cols=302 Identities=15% Similarity=0.146 Sum_probs=185.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCcee---eCCCCCCCCCCCCCCChhH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFYQ---FSDFAWPNSVTETFPDHNK 105 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 105 (523)
+||+|||||++|+++|..|++.|.+|+|||+++.+||+|.. +.|+..+......+. ...+.++.. ....+..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~--~~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVK--GVELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEEC--CEEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccC--CCccCHHH
Confidence 68999999999999999999999999999999899999876 334322211100000 011111000 00112223
Q ss_pred HHH-----------HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcc
Q 009897 106 VME-----------YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSA 174 (523)
Q Consensus 106 ~~~-----------yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 174 (523)
+.. .+..+.++.++ .+..++.+. .+ ...+.|.+ ++.
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v--~~~~g~~~~----i~---------------------~~~~~v~~-~g~----- 126 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGI--ARHQGTARF----LS---------------------ERKVLVEE-TGE----- 126 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC--EEEESCEEE----SS---------------------SSEEEETT-TCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEEE----ec---------------------CCeEEEee-CCE-----
Confidence 222 23445556676 666665332 11 12344433 333
Q ss_pred eeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCcc
Q 009897 175 TEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRY 254 (523)
Q Consensus 175 ~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~ 254 (523)
++.||+||+|||+. |..|+++ |.+. ..++++.+.... ...+++|+|||+|.+|+|+|..+++.+.+
T Consensus 127 --~~~~d~lviAtG~~---p~~~~~~---g~~~--~~v~~~~~~~~~--~~~~~~vvIiGgG~~g~e~A~~l~~~g~~-- 192 (455)
T 2yqu_A 127 --ELEARYILIATGSA---PLIPPWA---QVDY--ERVVTSTEALSF--PEVPKRLIVVGGGVIGLELGVVWHRLGAE-- 192 (455)
T ss_dssp --EEEEEEEEECCCEE---ECCCTTB---CCCS--SSEECHHHHTCC--SSCCSEEEEECCSHHHHHHHHHHHHTTCE--
T ss_pred --EEEecEEEECCCCC---CCCCCCC---CCCc--CcEechHHhhcc--ccCCCeEEEECCCHHHHHHHHHHHHcCCE--
Confidence 79999999999964 7777777 5432 135555544332 12479999999999999999999998754
Q ss_pred CEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCc
Q 009897 255 PCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHS 334 (523)
Q Consensus 255 ~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~ 334 (523)
|+++.+.+. ++|..+ .
T Consensus 193 -V~lv~~~~~-~l~~~~-----------------------------------~--------------------------- 208 (455)
T 2yqu_A 193 -VIVLEYMDR-ILPTMD-----------------------------------L--------------------------- 208 (455)
T ss_dssp -EEEECSSSS-SCTTSC-----------------------------------H---------------------------
T ss_pred -EEEEecCCc-cccccC-----------------------------------H---------------------------
Confidence 999998765 233221 0
Q ss_pred ccccccCcceeecCcchhhhccCCCEEEEecC-ceEEec--Cc--EEEcCCceeeeccEEEEecCCCCCcccc--ccccc
Q 009897 335 FLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCK--NG--LVIDGETTPLVTDIVIFATGYKSDEKLK--NIFKS 407 (523)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~--~~--v~l~dG~~~~~~D~VI~ATG~~~~~~l~--~~~~~ 407 (523)
.+.+.+.+.+++.+|+++.+. +.+++. ++ +.+++|++ +++|.||+|||++|+..++ +..+.
T Consensus 209 -----------~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~-i~~D~vv~A~G~~p~~~~l~~~~~g~ 276 (455)
T 2yqu_A 209 -----------EVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEV-LEADRVLVAVGRRPYTEGLSLENAGL 276 (455)
T ss_dssp -----------HHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCE-EEESEEEECSCEEECCTTCCGGGGTC
T ss_pred -----------HHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeE-EEcCEEEECcCCCcCCCCCChhhcCC
Confidence 001111223334456777664 666653 23 45568888 9999999999999987642 21111
Q ss_pred hhhhhhhcCCCcccccccccCCCCCeEEecccCCCC-chhhHHHHHHHHHHHHcCC
Q 009897 408 TYFQKQITGSSAPLYREGIHPQIPQLAILGYADSPS-ILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 408 ~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~~-~~~~ae~Qa~~~a~~l~g~ 462 (523)
.. .. .........+.++.|+||++|.+.... ..+.+..|++.+|..+.|+
T Consensus 277 ~~-~~----~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 327 (455)
T 2yqu_A 277 ST-DE----RGRIPVDEHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRG 327 (455)
T ss_dssp CC-CT----TSCCCCCTTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred cc-CC----CCcEeECCCcccCCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcCC
Confidence 11 00 000111122446789999999876543 4578999999999999875
No 68
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.93 E-value=5.8e-26 Score=238.98 Aligned_cols=307 Identities=15% Similarity=0.121 Sum_probs=187.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCC------CCCccccc--ccCcccccCCcCcee-----eCCCCCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS------GIGGVWSQ--TIESTKLQTPKSFYQ-----FSDFAWPNS 95 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~------~~GG~w~~--~~~~~~~~~~~~~~~-----~~~~~~~~~ 95 (523)
+.+||+|||||++|+++|..|++.|++|+|||+++ .+||+|.. +.|...+......+. +..+.+..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~- 80 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGIST- 80 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEEC-
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCccc-
Confidence 45899999999999999999999999999999986 46777754 333322211110000 11111110
Q ss_pred CCCCCCChhHHHHHHH-----------HHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEE
Q 009897 96 VTETFPDHNKVMEYLQ-----------AYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVT 164 (523)
Q Consensus 96 ~~~~~~~~~~~~~yl~-----------~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 164 (523)
.....+...+.++.+ ...++.++ .+..+. +..+ + ...+.|.
T Consensus 81 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g~-~~~~---~---------------------~~~~~v~ 132 (476)
T 3lad_A 81 -GEVAIDVPTMIARKDQIVRNLTGGVASLIKANGV--TLFEGH-GKLL---A---------------------GKKVEVT 132 (476)
T ss_dssp -SCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEESE-EEEC---S---------------------TTCEEEE
T ss_pred -CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEe---c---------------------CCEEEEE
Confidence 011122333333332 33344455 444443 2221 1 2346665
Q ss_pred EeecccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHH
Q 009897 165 VQEARNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAA 244 (523)
Q Consensus 165 ~~~~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~ 244 (523)
..++ +.+.+.||+||+|||+. |..|+.+ +.+ ...++++.+.... ...+++|+|||+|.+|+|+|.
T Consensus 133 ~~~g-----~~~~~~~d~lvlAtG~~---p~~~~~~---~~~--~~~v~~~~~~~~~--~~~~~~v~ViGgG~~g~e~A~ 197 (476)
T 3lad_A 133 AADG-----SSQVLDTENVILASGSK---PVEIPPA---PVD--QDVIVDSTGALDF--QNVPGKLGVIGAGVIGLELGS 197 (476)
T ss_dssp CTTS-----CEEEECCSCEEECCCEE---ECCCTTS---CCC--SSSEEEHHHHTSC--SSCCSEEEEECCSHHHHHHHH
T ss_pred cCCC-----ceEEEEcCEEEEcCCCC---CCCCCCC---CCC--cccEEechhhhcc--ccCCCeEEEECCCHHHHHHHH
Confidence 4333 23478999999999965 5655433 221 1235565544332 235899999999999999999
Q ss_pred HHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCc
Q 009897 245 EVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPL 324 (523)
Q Consensus 245 ~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (523)
.++..+.+ ||++.|.+. ++|..+
T Consensus 198 ~l~~~g~~---Vtlv~~~~~-~l~~~~----------------------------------------------------- 220 (476)
T 3lad_A 198 VWARLGAE---VTVLEAMDK-FLPAVD----------------------------------------------------- 220 (476)
T ss_dssp HHHHTTCE---EEEEESSSS-SSTTSC-----------------------------------------------------
T ss_pred HHHHcCCc---EEEEecCCC-cCcccC-----------------------------------------------------
Confidence 99998754 999999775 223221
Q ss_pred ccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC--c--EEEcCC---ceeeeccEEEEecCCC
Q 009897 325 KKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN--G--LVIDGE---TTPLVTDIVIFATGYK 396 (523)
Q Consensus 325 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~--~--v~l~dG---~~~~~~D~VI~ATG~~ 396 (523)
+.+.+.+.+.+++.+|+++.+. +.+++.+ + +++.++ ++ +++|.||+|||++
T Consensus 221 --------------------~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~-~~~D~vi~a~G~~ 279 (476)
T 3lad_A 221 --------------------EQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKS-QAFDKLIVAVGRR 279 (476)
T ss_dssp --------------------HHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEE-EEESEEEECSCEE
T ss_pred --------------------HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEE-EECCEEEEeeCCc
Confidence 0011122344556678888775 7777643 2 666654 45 9999999999999
Q ss_pred CCcccc--ccccchhh-hhhhcCCCcccccccccCCCCCeEEecccCC-CCchhhHHHHHHHHHHHHcCCC
Q 009897 397 SDEKLK--NIFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADS-PSILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 397 ~~~~l~--~~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~-~~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
|+...+ +..+...- +..+.. . ..+.++.|+||++|.+.. +...+.+..|++.+|..+.|+.
T Consensus 280 p~~~~l~~~~~g~~~~~~G~i~v---d---~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 344 (476)
T 3lad_A 280 PVTTDLLAADSGVTLDERGFIYV---D---DYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHK 344 (476)
T ss_dssp ECCTTCCSSCCSCCBCTTSCBCC---C---TTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHCC
T ss_pred ccCCCCCccccCccccCCCCEee---C---CCcccCCCCEEEEEccCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 987532 11111100 011111 1 223468999999998874 4456889999999999998764
No 69
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.93 E-value=7.1e-26 Score=238.64 Aligned_cols=306 Identities=16% Similarity=0.236 Sum_probs=188.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccC---C------CCCccccc--ccCcccccCCcCce----eeCCCCC
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR---S------GIGGVWSQ--TIESTKLQTPKSFY----QFSDFAW 92 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~---~------~~GG~w~~--~~~~~~~~~~~~~~----~~~~~~~ 92 (523)
++.+||+|||||++|+++|..|++.|++|+|||+. + .+||+|.+ +.|+..+..+...+ ....+.+
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 35689999999999999999999999999999941 1 38999986 44543322111100 0111111
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHh-----------CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCe
Q 009897 93 PNSVTETFPDHNKVMEYLQAYAAHF-----------NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKW 161 (523)
Q Consensus 93 ~~~~~~~~~~~~~~~~yl~~~~~~~-----------~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (523)
... .....+...+.++.+.+.+.+ ++ .+. ...+..++. ..+
T Consensus 87 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~-~g~a~~~~~------------------------~~v 138 (483)
T 3dgh_A 87 NVD-DKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKV--EYI-NGLGSFVDS------------------------HTL 138 (483)
T ss_dssp CCC-CCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEE-CSEEEEEET------------------------TEE
T ss_pred ccC-CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEE-EeEEEEccC------------------------CEE
Confidence 110 112345566766666655443 22 121 223332221 234
Q ss_pred EEEEeecccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHH
Q 009897 162 NVTVQEARNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVD 241 (523)
Q Consensus 162 ~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d 241 (523)
.|...++ + +++.||+||+|||+ .|..|++| |.+.+ .+++.++... ...+++|+|||+|.+|+|
T Consensus 139 ~v~~~~g-----~-~~~~~d~lviATGs---~p~~p~i~---G~~~~---~~~~~~~~~~--~~~~~~vvViGgG~~g~E 201 (483)
T 3dgh_A 139 LAKLKSG-----E-RTITAQTFVIAVGG---RPRYPDIP---GAVEY---GITSDDLFSL--DREPGKTLVVGAGYIGLE 201 (483)
T ss_dssp EEECTTC-----C-EEEEEEEEEECCCE---EECCCSST---THHHH---CBCHHHHTTC--SSCCCEEEEECCSHHHHH
T ss_pred EEEeCCC-----e-EEEEcCEEEEeCCC---CcCCCCCC---Ccccc---cCcHHHHhhh--hhcCCcEEEECCCHHHHH
Confidence 4543332 1 37999999999995 47888888 76432 2333332221 124789999999999999
Q ss_pred HHHHHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhc
Q 009897 242 VAAEVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWT 321 (523)
Q Consensus 242 ~a~~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (523)
+|..++..+.+ ||++.|.. +++..+ .
T Consensus 202 ~A~~l~~~g~~---Vtlv~~~~--~l~~~d-----------------------------------~-------------- 227 (483)
T 3dgh_A 202 CAGFLKGLGYE---PTVMVRSI--VLRGFD-----------------------------------Q-------------- 227 (483)
T ss_dssp HHHHHHHTTCE---EEEEESSC--SSTTSC-----------------------------------H--------------
T ss_pred HHHHHHHcCCE---EEEEeCCC--CCcccC-----------------------------------H--------------
Confidence 99999998754 99998842 222221 0
Q ss_pred CCcccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEec--Cc---EEEcCCc-----eeeeccEEE
Q 009897 322 FPLKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCK--NG---LVIDGET-----TPLVTDIVI 390 (523)
Q Consensus 322 ~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~--~~---v~l~dG~-----~~~~~D~VI 390 (523)
.+.+.+.+.+++.+|+++.+. +.++.. ++ |++.++. + +++|.||
T Consensus 228 ------------------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~-~~~D~vi 282 (483)
T 3dgh_A 228 ------------------------QMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESE-DVYDTVL 282 (483)
T ss_dssp ------------------------HHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEE-EEESEEE
T ss_pred ------------------------HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeE-EEcCEEE
Confidence 011112234445566777664 666653 22 6666654 5 8999999
Q ss_pred EecCCCCCcccccc--ccchhhhhhhcCCCcccccccccCCCCCeEEecccCC--CCchhhHHHHHHHHHHHHcCCC
Q 009897 391 FATGYKSDEKLKNI--FKSTYFQKQITGSSAPLYREGIHPQIPQLAILGYADS--PSILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 391 ~ATG~~~~~~l~~~--~~~~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~--~~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
+|||++|+..++.+ .+...-...+.. . ..+.++.|+||++|.+.. +...+.+..|++.+|..+.|..
T Consensus 283 ~a~G~~p~~~~l~l~~~gl~~~~G~i~v---d---~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~ 353 (483)
T 3dgh_A 283 WAIGRKGLVDDLNLPNAGVTVQKDKIPV---D---SQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGS 353 (483)
T ss_dssp ECSCEEECCGGGTGGGTTCCCBTTBBCC---C---TTCBCSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHHSCC
T ss_pred ECcccccCcCcCCchhcCccccCCEEEE---C---cCCccCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 99999998765421 111110111111 1 223468999999998852 4456889999999999998763
No 70
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.93 E-value=1.4e-25 Score=236.50 Aligned_cols=299 Identities=15% Similarity=0.172 Sum_probs=186.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCc----CceeeCCCCCCCCCCCCCCCh
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPK----SFYQFSDFAWPNSVTETFPDH 103 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 103 (523)
.+||+|||||++|+++|..|++.|++|+|||+ ..+||+|.. ++|...+..+. ....+..+.+... ....+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 102 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYA--DPIFNW 102 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCC--CCEECH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccC--CCccCH
Confidence 37999999999999999999999999999999 789999876 34433221111 0011111222110 011122
Q ss_pred hH-----------HHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEe-ecccC
Q 009897 104 NK-----------VMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQ-EARNV 171 (523)
Q Consensus 104 ~~-----------~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~ 171 (523)
.. +..++....+..++ .+..+ ++..++. +.|.+. ++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g-~~~~i~~--------------------------~~v~v~~~~~-- 151 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGLQNSNV--HIYES-RAVFVDE--------------------------HTLELSVTGE-- 151 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEEEET--------------------------TEEEETTTCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEeeC--------------------------CEEEEecCCe--
Confidence 22 22333444455555 44443 4444432 345554 333
Q ss_pred CcceeEEEeCEEEEeeeecCCCCC-CCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhc
Q 009897 172 SSATEAYQVDFVILCIGRYSDLPN-TPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRN 250 (523)
Q Consensus 172 ~~~~~~~~~d~vVlAtG~~s~~p~-~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~ 250 (523)
.+.||+||+|||.. |. .|++| |.+. +.++.++... ...+++|+|||+|.+|+|+|..++..+
T Consensus 152 -----~~~~d~lviAtG~~---p~~~p~i~---G~~~----~~~~~~~~~~--~~~~~~v~ViGgG~~g~e~A~~l~~~g 214 (484)
T 3o0h_A 152 -----RISAEKILIATGAK---IVSNSAIK---GSDL----CLTSNEIFDL--EKLPKSIVIVGGGYIGVEFANIFHGLG 214 (484)
T ss_dssp -----EEEEEEEEECCCEE---ECCC--CB---TGGG----SBCTTTGGGC--SSCCSEEEEECCSHHHHHHHHHHHHTT
T ss_pred -----EEEeCEEEEccCCC---cccCCCCC---Cccc----cccHHHHHhH--HhcCCcEEEECcCHHHHHHHHHHHHcC
Confidence 79999999999965 66 77777 6552 2333333322 234899999999999999999999987
Q ss_pred CCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCC
Q 009897 251 GVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMI 330 (523)
Q Consensus 251 ~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 330 (523)
.+ |+++.|.+.+ ++..+
T Consensus 215 ~~---Vtli~~~~~~-l~~~~----------------------------------------------------------- 231 (484)
T 3o0h_A 215 VK---TTLLHRGDLI-LRNFD----------------------------------------------------------- 231 (484)
T ss_dssp CE---EEEECSSSSS-STTSC-----------------------------------------------------------
T ss_pred Ce---EEEEECCCcc-ccccC-----------------------------------------------------------
Confidence 54 9999987652 22221
Q ss_pred CCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC----cEEEcCCceeeeccEEEEecCCCCCcccccc-
Q 009897 331 PGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN----GLVIDGETTPLVTDIVIFATGYKSDEKLKNI- 404 (523)
Q Consensus 331 p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~----~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~- 404 (523)
+.+...+.+.+++.+|+++.+. +.+++.+ .|++.+|++ +++|.||+|||++|+..++.+
T Consensus 232 --------------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~-i~aD~Vi~A~G~~p~~~~l~l~ 296 (484)
T 3o0h_A 232 --------------YDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQT-ICADRVMLATGRVPNTTGLGLE 296 (484)
T ss_dssp --------------HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCE-EEESEEEECCCEEECCTTCCHH
T ss_pred --------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcE-EEcCEEEEeeCCCcCCCCCChh
Confidence 0011122234445567777764 7777654 378889988 999999999999998764221
Q ss_pred -ccchhhhhhhcCCCcccccccccCCCCCeEEecccCC-CCchhhHHHHHHHHHHHHcCC
Q 009897 405 -FKSTYFQKQITGSSAPLYREGIHPQIPQLAILGYADS-PSILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 405 -~~~~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~-~~~~~~ae~Qa~~~a~~l~g~ 462 (523)
.+.. +.+ .........+.++.|+||++|.+.. ....+.+..|++.+|..+.|.
T Consensus 297 ~~g~~-~~~----~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 297 RAGVK-VNE----FGAVVVDEKMTTNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp HHTCC-BCT----TSCBCCCTTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC-
T ss_pred hcCce-ECC----CCCEeECCCCCCCCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcCC
Confidence 1111 010 0001111234478999999998876 345678999999999999875
No 71
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.93 E-value=1.1e-25 Score=236.26 Aligned_cols=305 Identities=16% Similarity=0.223 Sum_probs=182.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCc-eeeCCCCCCCCC--CCCCCChh
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSF-YQFSDFAWPNSV--TETFPDHN 104 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~ 104 (523)
.+||+|||||++|+++|..|++.|++|+|||++ .+||+|.+ ++|...+...... +.....|+.... ........
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRS 82 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCHH
Confidence 489999999999999999999999999999997 79999986 3333221110000 001111111000 01111223
Q ss_pred HHH-------HHHHH--HHHHh----CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccC
Q 009897 105 KVM-------EYLQA--YAAHF----NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNV 171 (523)
Q Consensus 105 ~~~-------~yl~~--~~~~~----~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 171 (523)
.+. ++++. +.+.+ ++ .+..+ ++..++. +.+.|.+.++
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~~~v--~~~~g-~~~~~~~------------------------~~~~v~~~~g--- 132 (467)
T 1zk7_A 83 KLLAQQQARVDELRHAKYEGILGGNPAI--TVVHG-EARFKDD------------------------QSLTVRLNEG--- 132 (467)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHTTCTTE--EEEEE-EEEEEET------------------------TEEEEEETTS---
T ss_pred HHHHHHHHHHHHHhhhhHHHHHhccCCe--EEEEE-EEEEccC------------------------CEEEEEeCCC---
Confidence 332 23321 22222 33 33333 3444442 3366665444
Q ss_pred CcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcC
Q 009897 172 SSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNG 251 (523)
Q Consensus 172 ~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~ 251 (523)
+..++.||+||+|||+. |..|++| |.+.. .++++.+.... ...+++|+|||+|.+|+|+|..+++.+.
T Consensus 133 --~~~~~~~d~lviAtGs~---p~~p~i~---G~~~~--~~~~~~~~~~~--~~~~~~vvViGgG~~g~E~A~~l~~~g~ 200 (467)
T 1zk7_A 133 --GERVVMFDRCLVATGAS---PAVPPIP---GLKES--PYWTSTEALAS--DTIPERLAVIGSSVVALELAQAFARLGS 200 (467)
T ss_dssp --SEEEEECSEEEECCCEE---ECCCCCT---TTTTS--CCBCHHHHHHC--SSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred --ceEEEEeCEEEEeCCCC---CCCCCCC---CCCcC--ceecHHHHhcc--cccCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 12379999999999954 7888888 66532 12333322211 1247999999999999999999999875
Q ss_pred CccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCC
Q 009897 252 VRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIP 331 (523)
Q Consensus 252 ~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p 331 (523)
+ ||++.|.+. ++| .+ .
T Consensus 201 ~---Vtlv~~~~~-~l~-~~-----------------------------------~------------------------ 216 (467)
T 1zk7_A 201 K---VTVLARNTL-FFR-ED-----------------------------------P------------------------ 216 (467)
T ss_dssp E---EEEECSSCT-TTT-SC-----------------------------------H------------------------
T ss_pred E---EEEEEECCc-cCC-CC-----------------------------------H------------------------
Confidence 4 999998765 223 21 0
Q ss_pred CCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecCc----EEEcCCceeeeccEEEEecCCCCCcccc--cc
Q 009897 332 GHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNG----LVIDGETTPLVTDIVIFATGYKSDEKLK--NI 404 (523)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~----v~l~dG~~~~~~D~VI~ATG~~~~~~l~--~~ 404 (523)
.+.+.+.+.+++.+|+++.+. +.+++.++ |.++ +.+ +++|.||+|||++|+..++ +.
T Consensus 217 --------------~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~-i~aD~Vv~a~G~~p~~~~l~l~~ 280 (467)
T 1zk7_A 217 --------------AIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGE-LRADKLLVATGRTPNTRSLALDA 280 (467)
T ss_dssp --------------HHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEE-EEESEEEECSCEEESCTTSCGGG
T ss_pred --------------HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcE-EEcCEEEECCCCCcCCCcCCchh
Confidence 011122234444567777664 66665322 4444 556 9999999999999986532 11
Q ss_pred ccchhhhhhhcCCCcccccccccCCCCCeEEecccCCC-CchhhHHHHHHHHHHHHcCC
Q 009897 405 FKSTYFQKQITGSSAPLYREGIHPQIPQLAILGYADSP-SILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 405 ~~~~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-~~~~~ae~Qa~~~a~~l~g~ 462 (523)
.+.. +.. .........+.++.|+||++|.+... ...+.+..|++.+|..+.+.
T Consensus 281 ~gl~-~~~----~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 334 (467)
T 1zk7_A 281 AGVT-VNA----QGAIVIDQGMRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGG 334 (467)
T ss_dssp GTCC-BCT----TSCBCCCTTCBCSSTTEEECSTTBSSCCCHHHHHHHHHHHHHHHTTC
T ss_pred cCCc-CCC----CCCEEECCCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 1111 000 00011112244689999999987653 34678999999999988775
No 72
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.93 E-value=5.1e-26 Score=239.97 Aligned_cols=307 Identities=16% Similarity=0.213 Sum_probs=188.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEcc--------CCCCCccccc--ccCcccccCCcCc----eeeCCCCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEA--------RSGIGGVWSQ--TIESTKLQTPKSF----YQFSDFAWPN 94 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~--------~~~~GG~w~~--~~~~~~~~~~~~~----~~~~~~~~~~ 94 (523)
+.+||+|||||++|++||..|++.|.+|+|||+ ...+||+|.+ ++|+..+...... .....+.+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 568999999999999999999999999999997 5679999986 4554433211111 1111222221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHh-----------CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEE
Q 009897 95 SVTETFPDHNKVMEYLQAYAAHF-----------NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNV 163 (523)
Q Consensus 95 ~~~~~~~~~~~~~~yl~~~~~~~-----------~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 163 (523)
. .........+.++.+.+.+++ ++ .+ +..++.. .+ ...+.|
T Consensus 85 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V--~~-i~g~~~~---~~---------------------~~~v~v 136 (488)
T 3dgz_A 85 A-QPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKV--KY-FNIKASF---VD---------------------EHTVRG 136 (488)
T ss_dssp C-SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ECCEEEE---SS---------------------SSEEEE
T ss_pred C-CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EE-EEEEEEE---cc---------------------CCeEEE
Confidence 1 122345566666665555433 22 11 1222221 11 123444
Q ss_pred EEeecccCCcceeEEEeCEEEEeeeecCCCCCCCC-CCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHH
Q 009897 164 TVQEARNVSSATEAYQVDFVILCIGRYSDLPNTPD-FPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDV 242 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~-~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~ 242 (523)
...++ +.+++.||+||+|||+ .|..|+ +| |.+.+ .+++.++... ...+++|+|||+|.+|+|+
T Consensus 137 ~~~~g-----~~~~~~~d~lViATGs---~p~~p~~i~---G~~~~---~~~~~~~~~~--~~~~~~vvViGgG~ig~E~ 200 (488)
T 3dgz_A 137 VDKGG-----KATLLSAEHIVIATGG---RPRYPTQVK---GALEY---GITSDDIFWL--KESPGKTLVVGASYVALEC 200 (488)
T ss_dssp ECTTS-----CEEEEEEEEEEECCCE---EECCCSSCB---THHHH---CBCHHHHTTC--SSCCCSEEEECCSHHHHHH
T ss_pred EeCCC-----ceEEEECCEEEEcCCC---CCCCCCCCC---Ccccc---cCcHHHHHhh--hhcCCeEEEECCCHHHHHH
Confidence 43222 2347999999999995 478887 88 75432 2333333222 1247899999999999999
Q ss_pred HHHHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcC
Q 009897 243 AAEVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTF 322 (523)
Q Consensus 243 a~~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (523)
|..+++.+.+ ||++.|.. +++..+
T Consensus 201 A~~l~~~g~~---Vtlv~~~~--~l~~~d--------------------------------------------------- 224 (488)
T 3dgz_A 201 AGFLTGIGLD---TTVMMRSI--PLRGFD--------------------------------------------------- 224 (488)
T ss_dssp HHHHHHTTCC---EEEEESSC--SSTTSC---------------------------------------------------
T ss_pred HHHHHHcCCc---eEEEEcCc--ccccCC---------------------------------------------------
Confidence 9999998754 99998853 222221
Q ss_pred CcccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEec---Cc--EEEcC---Cce-eeeccEEEEe
Q 009897 323 PLKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCK---NG--LVIDG---ETT-PLVTDIVIFA 392 (523)
Q Consensus 323 ~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~---~~--v~l~d---G~~-~~~~D~VI~A 392 (523)
+.+.+.+.+.+++.+|+++.+. +.++.. +. +.+.+ |+. .+++|.||+|
T Consensus 225 ----------------------~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a 282 (488)
T 3dgz_A 225 ----------------------QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWA 282 (488)
T ss_dssp ----------------------HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEEC
T ss_pred ----------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEc
Confidence 0011122234455567777764 566643 22 55544 552 2789999999
Q ss_pred cCCCCCcccccc--ccchhh--hhhhcCCCcccccccccCCCCCeEEecccCC--CCchhhHHHHHHHHHHHHcCCC
Q 009897 393 TGYKSDEKLKNI--FKSTYF--QKQITGSSAPLYREGIHPQIPQLAILGYADS--PSILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 393 TG~~~~~~l~~~--~~~~~l--~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~--~~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
||++|+..++.+ .+.... ...+.. . ..+.++.||||++|.+.. +...+.+..|++.+|..+.|..
T Consensus 283 ~G~~p~~~~l~l~~~g~~~~~~~G~i~v---d---~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~ 353 (488)
T 3dgz_A 283 IGRVPETRTLNLEKAGISTNPKNQKIIV---D---AQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKS 353 (488)
T ss_dssp SCEEESCGGGTGGGGTCCBCSSSCCBCC---C---TTSBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHSCC
T ss_pred ccCCcccCcCCccccCcEecCCCCeEeE---C---CCCccCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcCCC
Confidence 999999865321 111100 011111 1 234468999999998752 3456789999999999998863
No 73
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.93 E-value=3.6e-26 Score=250.72 Aligned_cols=267 Identities=20% Similarity=0.197 Sum_probs=192.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVM 107 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (523)
.+||+|||||++||++|..|++.|++|+|||+++.+||.|.. .+| .+....++.
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p------------------------~~~~~~~~~ 446 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALP------------------------GLSAWGRVK 446 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTST------------------------TCGGGGHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCC------------------------chhHHHHHH
Confidence 479999999999999999999999999999999999999875 222 122346788
Q ss_pred HHHHHHHHHh-CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEe
Q 009897 108 EYLQAYAAHF-NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILC 186 (523)
Q Consensus 108 ~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlA 186 (523)
+|+...++++ ++ .++++++|+ ..+.. ++.||+||+|
T Consensus 447 ~~~~~~~~~~~gv--~~~~~~~v~----------------------------------~~~~~-------~~~~d~lvlA 483 (690)
T 3k30_A 447 EYREAVLAELPNV--EIYRESPMT----------------------------------GDDIV-------EFGFEHVITA 483 (690)
T ss_dssp HHHHHHHHTCTTE--EEESSCCCC----------------------------------HHHHH-------HTTCCEEEEC
T ss_pred HHHHHHHHHcCCC--EEEECCeec----------------------------------HHHHh-------hcCCCEEEEc
Confidence 8888888876 65 555554321 11222 5689999999
Q ss_pred eeecCCC------CCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEc--CCCCHHHHHHHHHHhcCCccCEEE
Q 009897 187 IGRYSDL------PNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIG--FQKSAVDVAAEVANRNGVRYPCTL 258 (523)
Q Consensus 187 tG~~s~~------p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG--~G~sg~d~a~~l~~~~~~~~~Vt~ 258 (523)
||..+ . |..|++| |.+. ..++++.++... ....+++|+||| +|.+|+|+|..|+..+.+ |++
T Consensus 484 tG~~~-~~~~~~~~~~~~i~---G~~~--~~v~~~~~~l~~-~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~---Vtl 553 (690)
T 3k30_A 484 TGATW-RTDGVARFHTTALP---IAEG--MQVLGPDDLFAG-RLPDGKKVVVYDDDHYYLGGVVAELLAQKGYE---VSI 553 (690)
T ss_dssp CCEEE-CSSCCSSSCSSCCC---BCTT--SEEECHHHHHTT-CCCSSSEEEEEECSCSSHHHHHHHHHHHTTCE---EEE
T ss_pred CCCcc-ccccccccCCCCCC---CCCC--CcEEcHHHHhCC-CCCCCCEEEEEcCCCCccHHHHHHHHHhCCCe---eEE
Confidence 99872 2 5567777 6543 345666554333 345688999999 999999999999998754 999
Q ss_pred EEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCccccc
Q 009897 259 LFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQ 338 (523)
Q Consensus 259 ~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~ 338 (523)
+.+.+.. .+....
T Consensus 554 v~~~~~l-~~~~~~------------------------------------------------------------------ 566 (690)
T 3k30_A 554 VTPGAQV-SSWTNN------------------------------------------------------------------ 566 (690)
T ss_dssp EESSSST-TGGGGG------------------------------------------------------------------
T ss_pred Eeccccc-cccccc------------------------------------------------------------------
Confidence 9887641 111100
Q ss_pred ccCcceeecCcchhhhccCCCEEEEecC-ceEEecCcEEEc-----CCceeeeccEEEEecCCCCCccccccccchhhhh
Q 009897 339 ISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNGLVID-----GETTPLVTDIVIFATGYKSDEKLKNIFKSTYFQK 412 (523)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~v~l~-----dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l~~ 412 (523)
......+.+.+++.+|+++.+. +.+++++++.+. ++++ +++|.||+|||++|+..+.+.+ ..
T Consensus 567 ------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~-i~aD~VV~A~G~~p~~~l~~~l-----~~ 634 (690)
T 3k30_A 567 ------TFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERE-LECDAVVMVTARLPREELYLDL-----VA 634 (690)
T ss_dssp ------GTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEE-EECSEEEEESCEEECCHHHHHH-----HH
T ss_pred ------chhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEE-EECCEEEECCCCCCChHHHHHH-----hh
Confidence 0011223455566778888885 888988876654 4445 9999999999999987643321 11
Q ss_pred hhcCCCcccccccccCCCCCeEEecccCCCCchhhHHHHHHHHHHHHcCCC
Q 009897 413 QITGSSAPLYREGIHPQIPQLAILGYADSPSILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 413 ~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
. + . .++.|+||++|.+.....+..+..|++.+|..+.+.+
T Consensus 635 ~--~---~------~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l 674 (690)
T 3k30_A 635 R--R---D------AGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVL 674 (690)
T ss_dssp H--H---H------HTSCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCC
T ss_pred h--h---c------ccCCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhc
Confidence 0 0 0 4688999999998877777779999999999998874
No 74
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.92 E-value=7.3e-25 Score=228.65 Aligned_cols=293 Identities=16% Similarity=0.192 Sum_probs=187.7
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
+||+|||||++|+++|..|++. |.+|+|||+++.+|.. ....+.. .. ......+++..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~-~~~~~~~----------~~---------~~~~~~~~~~~ 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL-SAGMQLY----------LE---------GKVKDVNSVRY 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC-GGGHHHH----------HT---------TSSCCGGGSBS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc-cccchhh----------hc---------CccCCHHHhhc
Confidence 4899999999999999999997 8999999998766521 1000000 00 00011122222
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
++.+..+++++ .++++++|..++... + .|++.+.. +++..++.||+||+|||
T Consensus 61 ~~~~~~~~~gv--~~~~~~~v~~i~~~~----------------------~--~v~~~~~~--~g~~~~~~~d~lviAtG 112 (447)
T 1nhp_A 61 MTGEKMESRGV--NVFSNTEITAIQPKE----------------------H--QVTVKDLV--SGEERVENYDKLIISPG 112 (447)
T ss_dssp CCHHHHHHTTC--EEEETEEEEEEETTT----------------------T--EEEEEETT--TCCEEEEECSEEEECCC
T ss_pred CCHHHHHHCCC--EEEECCEEEEEeCCC----------------------C--EEEEEecC--CCceEEEeCCEEEEcCC
Confidence 33344556787 788899999998754 2 45554411 11223589999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCccEEecCCCCchh---h-hc--CCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEee
Q 009897 189 RYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAA---E-LI--NGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKT 262 (523)
Q Consensus 189 ~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~---~-~~--~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~ 262 (523)
+. |..|++| |.+. . .+++...+.+.. + .. .+++|+|||+|.+|+|+|..+++.+.+ |+++.+.
T Consensus 113 ~~---p~~p~i~---G~~~-~-~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~---Vtlv~~~ 181 (447)
T 1nhp_A 113 AV---PFELDIP---GKDL-D-NIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKK---VTVIDIL 181 (447)
T ss_dssp EE---ECCCCST---TTTS-B-SEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CC---cCCCCCC---CCCC-C-CeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCe---EEEEecC
Confidence 64 7888888 7652 2 355544332211 1 11 689999999999999999999998754 9999987
Q ss_pred ceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCc
Q 009897 263 VHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSC 342 (523)
Q Consensus 263 ~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 342 (523)
+. +++... +
T Consensus 182 ~~-~l~~~~--~-------------------------------------------------------------------- 190 (447)
T 1nhp_A 182 DR-PLGVYL--D-------------------------------------------------------------------- 190 (447)
T ss_dssp SS-TTTTTC--C--------------------------------------------------------------------
T ss_pred cc-cccccC--C--------------------------------------------------------------------
Confidence 64 222110 0
Q ss_pred ceeecCcchhhhccCCCEEEEecC-ceEEecCc-E--EEcCCceeeeccEEEEecCCCCCccccccccchhh-hhhhcCC
Q 009897 343 MFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNG-L--VIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYF-QKQITGS 417 (523)
Q Consensus 343 ~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~-v--~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l-~~~~~~~ 417 (523)
+.+.+.+.+.+++.+|+++.+. +.+++.++ + +..+|.+ +++|.||+|||++|+..+++.. .... +..+..
T Consensus 191 --~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~-i~~d~vi~a~G~~p~~~~~~~~-~~~~~~G~i~V- 265 (447)
T 1nhp_A 191 --KEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKNA-YDADLVVVAVGVRPNTAWLKGT-LELHPNGLIKT- 265 (447)
T ss_dssp --HHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEESSCE-EECSEEEECSCEEESCGGGTTT-SCBCTTSCBCC-
T ss_pred --HHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEECCCE-EECCEEEECcCCCCChHHHHhh-hhhcCCCcEEE-
Confidence 0011223345556678888874 77776543 2 2336677 9999999999999987654321 1100 111111
Q ss_pred CcccccccccCCCCCeEEecccCCC-----------CchhhHHHHHHHHHHHHcCCC
Q 009897 418 SAPLYREGIHPQIPQLAILGYADSP-----------SILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 418 ~~~ly~~~~~~~~p~l~~iG~~~~~-----------~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
..| +.++.|+||++|.+... ...+.+..|++.+|..+.|..
T Consensus 266 --d~~---~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 317 (447)
T 1nhp_A 266 --DEY---MRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPV 317 (447)
T ss_dssp --CTT---CBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCC
T ss_pred --Ccc---ccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCC
Confidence 122 34588999999987642 245789999999999998853
No 75
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.92 E-value=1.8e-25 Score=234.37 Aligned_cols=299 Identities=14% Similarity=0.163 Sum_probs=185.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCc----CceeeCCCCCCCCCCCCCCCh
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPK----SFYQFSDFAWPNSVTETFPDH 103 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 103 (523)
.+||+|||||++|+++|..|++.|++|+|||+ ..+||+|.. +.|...+..+. ....+..+.+... ....+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~--~~~~~~ 81 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVG--ESRFDW 81 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEEC--CCEECH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccC--CCCcCH
Confidence 47999999999999999999999999999999 789999875 33332211100 0001111111100 001122
Q ss_pred hHH-----------HHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEe-ecccC
Q 009897 104 NKV-----------MEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQ-EARNV 171 (523)
Q Consensus 104 ~~~-----------~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~ 171 (523)
..+ ..++..+.+..++ .+..+ ++..+ + .+.|.+. ++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i---~-----------------------~~~v~~~~~~~-- 130 (463)
T 4dna_A 82 AKLVAAKEQEIARLEGLYRKGLANAGA--EILDT-RAELA---G-----------------------PNTVKLLASGK-- 130 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEES-CEEES---S-----------------------SSEEEETTTTE--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEE-EEEEe---e-----------------------CCEEEEecCCe--
Confidence 222 2334444455555 44443 33222 1 2456652 332
Q ss_pred CcceeEEEeCEEEEeeeecCCCCC-CCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhc
Q 009897 172 SSATEAYQVDFVILCIGRYSDLPN-TPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRN 250 (523)
Q Consensus 172 ~~~~~~~~~d~vVlAtG~~s~~p~-~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~ 250 (523)
.+.||+||+|||.. |. .|++| |.+. ++++.++... ...+++|+|||+|.+|+|+|..++..+
T Consensus 131 -----~~~~d~lviAtG~~---p~~~p~i~---G~~~----~~~~~~~~~~--~~~~~~v~ViGgG~~g~e~A~~l~~~g 193 (463)
T 4dna_A 131 -----TVTAERIVIAVGGH---PSPHDALP---GHEL----CITSNEAFDL--PALPESILIAGGGYIAVEFANIFHGLG 193 (463)
T ss_dssp -----EEEEEEEEECCCEE---ECCCTTST---TGGG----CBCHHHHTTC--SSCCSEEEEECCSHHHHHHHHHHHHTT
T ss_pred -----EEEeCEEEEecCCC---cccCCCCC---Cccc----cccHHHHhhh--hcCCCeEEEECCCHHHHHHHHHHHHcC
Confidence 79999999999964 77 78888 7552 2233222221 124899999999999999999999987
Q ss_pred CCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCC
Q 009897 251 GVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMI 330 (523)
Q Consensus 251 ~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 330 (523)
.+ |+++.+.+..+ |..+
T Consensus 194 ~~---Vt~v~~~~~~l-~~~~----------------------------------------------------------- 210 (463)
T 4dna_A 194 VK---TTLIYRGKEIL-SRFD----------------------------------------------------------- 210 (463)
T ss_dssp CE---EEEECSSSSSS-TTSC-----------------------------------------------------------
T ss_pred Ce---EEEEEcCCccc-cccC-----------------------------------------------------------
Confidence 54 99999877522 3221
Q ss_pred CCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC-----cEE-EcCCceeeeccEEEEecCCCCCccccc
Q 009897 331 PGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN-----GLV-IDGETTPLVTDIVIFATGYKSDEKLKN 403 (523)
Q Consensus 331 p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~-----~v~-l~dG~~~~~~D~VI~ATG~~~~~~l~~ 403 (523)
+.+...+.+.+++.+|+++.+. +.+++.+ .|+ +++|+ +++|.||+|||++|+..++.
T Consensus 211 --------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~--i~aD~Vv~a~G~~p~~~~l~ 274 (463)
T 4dna_A 211 --------------QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE--IVADQVMLALGRMPNTNGLG 274 (463)
T ss_dssp --------------HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE--EEESEEEECSCEEESCTTSS
T ss_pred --------------HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe--EEeCEEEEeeCcccCCCCCC
Confidence 0011122344555677888764 7777643 255 66775 89999999999999876422
Q ss_pred --cccchhhhhhhcCCCcccccccccCCCCCeEEecccCCC-CchhhHHHHHHHHHHHHcCCC
Q 009897 404 --IFKSTYFQKQITGSSAPLYREGIHPQIPQLAILGYADSP-SILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 404 --~~~~~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
..+.. +.+ .........+.++.|+||++|.+... ...+.+..|++.+|..+.|..
T Consensus 275 l~~~g~~-~~~----~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 332 (463)
T 4dna_A 275 LEAAGVR-TNE----LGAIIVDAFSRTSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEYKNN 332 (463)
T ss_dssp TGGGTCC-BCT----TSCBCCCTTCBCSSTTEEECSGGGSSCCCHHHHHHHHHHHHHHHHSSC
T ss_pred ccccCce-ECC----CCCEeECcCCCCCCCCEEEEEecCCCCCChHHHHHHHHHHHHHHcCCC
Confidence 11111 110 00011112234789999999987663 346789999999999998753
No 76
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.92 E-value=1.7e-25 Score=230.81 Aligned_cols=292 Identities=15% Similarity=0.093 Sum_probs=187.5
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLE---NGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVM 107 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~---~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (523)
++|+|||||++|+++|..|++ .|.+|+|||+++..+..-. .++. .......+++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~-------------------~~~~---~~~~~~~~~~~ 59 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA-------------------LPHV---AIGVRDVDELK 59 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS-------------------SCCC---CSSCCCCCCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc-------------------hhhc---ccCCcCHHHHH
Confidence 589999999999999999999 8999999999875421100 0000 11122233445
Q ss_pred HHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEee
Q 009897 108 EYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCI 187 (523)
Q Consensus 108 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAt 187 (523)
.++.+.++++++ .+..+ +|+.++... ..|++.++. ++.+++.||+||+||
T Consensus 60 ~~~~~~~~~~gv--~~~~~-~v~~i~~~~------------------------~~V~~~~g~---~~~~~~~~d~lViAt 109 (409)
T 3h8l_A 60 VDLSEALPEKGI--QFQEG-TVEKIDAKS------------------------SMVYYTKPD---GSMAEEEYDYVIVGI 109 (409)
T ss_dssp EEHHHHTGGGTC--EEEEC-EEEEEETTT------------------------TEEEEECTT---SCEEEEECSEEEECC
T ss_pred HHHHHHHhhCCe--EEEEe-eEEEEeCCC------------------------CEEEEccCC---cccceeeCCEEEECC
Confidence 566667777787 67666 898888754 357776653 223469999999999
Q ss_pred eecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhc-----CCCEEEEEcCC-------------------C------
Q 009897 188 GRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELI-----NGKRVTVIGFQ-------------------K------ 237 (523)
Q Consensus 188 G~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~-----~~k~V~VvG~G-------------------~------ 237 (523)
|. .|+.|.+| |++. ...+...+.+..... ..++++|||+| .
T Consensus 110 G~---~~~~~~ip---G~~~---~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~ 180 (409)
T 3h8l_A 110 GA---HLATELVK---GWDK---YGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEG 180 (409)
T ss_dssp CC---EECGGGSB---THHH---HCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCH
T ss_pred CC---CcCccCCC---Chhh---cCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCC
Confidence 95 47777787 7654 234444444321111 12677799999 2
Q ss_pred CHHHHHHHHHHhcCC-c----cCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHH
Q 009897 238 SAVDVAAEVANRNGV-R----YPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSK 312 (523)
Q Consensus 238 sg~d~a~~l~~~~~~-~----~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (523)
.++|+|..++..... + .+|+++.+.+ .+|...
T Consensus 181 ~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~--~l~~~~----------------------------------------- 217 (409)
T 3h8l_A 181 PVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE--YLSDLS----------------------------------------- 217 (409)
T ss_dssp HHHHHHHHHHHHHHTTTCTTTEEEEEECSSS--SSTTBC-----------------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc--cccccC-----------------------------------------
Confidence 278888776643211 1 2589988866 223221
Q ss_pred HHHHHHHhcCCcccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecCcEEEcCCceeeeccEEEE
Q 009897 313 VVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNGLVIDGETTPLVTDIVIF 391 (523)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~v~l~dG~~~~~~D~VI~ 391 (523)
+.+.+.+.+.+++.+|+++.+. |+++++++|+++||++ +++|.||+
T Consensus 218 --------------------------------~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~-~~~D~vi~ 264 (409)
T 3h8l_A 218 --------------------------------PNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNT-IPADITIL 264 (409)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTCEEECSCCEEEECSSEEEETTSCE-EECSEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCCEEEcCCceEEECCCeEEECCCCE-EeeeEEEE
Confidence 0011122234455678888875 8999999999999998 99999999
Q ss_pred ecCCCCCccccccccchhhhhhhcCCCcccccccccCCCCCeEEecccCC---CCchhhHHHHHHHHHHHHcCCC
Q 009897 392 ATGYKSDEKLKNIFKSTYFQKQITGSSAPLYREGIHPQIPQLAILGYADS---PSILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 392 ATG~~~~~~l~~~~~~~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~---~~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
|||++++..+.+ .+...... ............+++||||++|.+.. +.....++.||+.+|+.|.+.+
T Consensus 265 a~G~~~~~~l~~-~~~~l~~~---~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 265 LPPYTGNPALKN-STPDLVDD---GGFIPTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp ECCEECCHHHHT-SCGGGSCT---TSCBCBBTTSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCccHHHHh-ccccCcCC---CCCEEeCcccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 999998753322 11111110 00011222333358999999998875 3356789999999988875543
No 77
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.92 E-value=1.1e-24 Score=229.24 Aligned_cols=293 Identities=14% Similarity=0.179 Sum_probs=184.7
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHH-
Q 009897 31 RKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVM- 107 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 107 (523)
+||+|||||++|+++|..|++. |.+|+|||+.+..++.... .+.. .. ......+++.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-~~~~----------~~---------~~~~~~~~l~~ 96 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG-LPYV----------IS---------GAIASTEKLIA 96 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG-HHHH----------HT---------TSSSCGGGGBS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC-cchh----------hc---------CCcCCHHHhhh
Confidence 6999999999999999999996 8999999998766432110 0000 00 0011112221
Q ss_pred HHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEee
Q 009897 108 EYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCI 187 (523)
Q Consensus 108 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAt 187 (523)
.+.+.+.+++++ .++++++|+.++... + .|.+.+.. +++..++.||+||+||
T Consensus 97 ~~~~~~~~~~gv--~~~~~~~v~~i~~~~----------------------~--~v~v~~~~--~g~~~~~~~d~lviAt 148 (480)
T 3cgb_A 97 RNVKTFRDKYGI--DAKVRHEVTKVDTEK----------------------K--IVYAEHTK--TKDVFEFSYDRLLIAT 148 (480)
T ss_dssp SCHHHHHHTTCC--EEESSEEEEEEETTT----------------------T--EEEEEETT--TCCEEEEECSEEEECC
T ss_pred cCHHHHHhhcCC--EEEeCCEEEEEECCC----------------------C--EEEEEEcC--CCceEEEEcCEEEECC
Confidence 123444566687 788899999998754 2 34444311 1122368999999999
Q ss_pred eecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhh---h---cCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEe
Q 009897 188 GRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAE---L---INGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFK 261 (523)
Q Consensus 188 G~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~---~---~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r 261 (523)
|+. |..|++| |.+. . .+++...+.+... . ..+++|+|||+|.+|+|+|..+++.+.+ |+++.|
T Consensus 149 G~~---p~~p~i~---G~~~-~-~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~ 217 (480)
T 3cgb_A 149 GVR---PVMPEWE---GRDL-Q-GVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKK---VRMIER 217 (480)
T ss_dssp CEE---ECCCCCB---TTTS-B-TEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCE---EEEECC
T ss_pred CCc---ccCCCCC---CccC-C-CEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCe---EEEEEe
Confidence 964 7888888 7643 1 2555443332211 1 1689999999999999999999998754 999998
Q ss_pred eceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccC
Q 009897 262 TVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISS 341 (523)
Q Consensus 262 ~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 341 (523)
.+. +++..+ .
T Consensus 218 ~~~-~l~~~~-----------------------------------~---------------------------------- 227 (480)
T 3cgb_A 218 NDH-IGTIYD-----------------------------------G---------------------------------- 227 (480)
T ss_dssp GGG-TTSSSC-----------------------------------H----------------------------------
T ss_pred CCc-hhhcCC-----------------------------------H----------------------------------
Confidence 765 222110 0
Q ss_pred cceeecCcchhhhccCCCEEEEecC-ceEEecCc-E--EEcCCceeeeccEEEEecCCCCCccccccccchhh-hhhhcC
Q 009897 342 CMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNG-L--VIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTYF-QKQITG 416 (523)
Q Consensus 342 ~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~-v--~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l-~~~~~~ 416 (523)
.+.+.+.+.+++.+|+++.+. +.+++.++ + +..++.+ +++|.||+|||++|+..+++..+...- +..+..
T Consensus 228 ----~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~-i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~V 302 (480)
T 3cgb_A 228 ----DMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETDKGT-YKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEV 302 (480)
T ss_dssp ----HHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETTEE-EECSEEEECSCEEESCGGGTTSCCCBCTTSCBCC
T ss_pred ----HHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCCE-EEcCEEEECcCCCcChHHHHhCCcccCCCCCEEE
Confidence 011112233444566777664 66665443 2 2335556 999999999999998765443222110 011111
Q ss_pred CCcccccccccCCCCCeEEecccCCC-----------CchhhHHHHHHHHHHHHcCCC
Q 009897 417 SSAPLYREGIHPQIPQLAILGYADSP-----------SILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 417 ~~~~ly~~~~~~~~p~l~~iG~~~~~-----------~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
. ..+.++.|+||++|.+... ..+..+..|++.+|..+.|..
T Consensus 303 ---d---~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 354 (480)
T 3cgb_A 303 ---N---AYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKR 354 (480)
T ss_dssp ---C---TTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred ---C---CCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCC
Confidence 1 2234578999999987632 236789999999999998853
No 78
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.91 E-value=5.8e-25 Score=228.90 Aligned_cols=164 Identities=18% Similarity=0.251 Sum_probs=117.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
..++|+||||||+||++|..|++.|++|+|||+.+.+||.|.+..|.. ....++.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~------------------------~~~~~~~~ 176 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGF------------------------KLEKSVVE 176 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTT------------------------TSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCc------------------------cCCHHHHH
Confidence 458999999999999999999999999999999999999987533211 11256777
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
+..++.+++++ .+++++.|. ..|++.+. .+.||+||+|||
T Consensus 177 ~~~~~l~~~gv--~~~~~~~v~------------------------------~~v~~~~~--------~~~~d~vvlAtG 216 (456)
T 2vdc_G 177 RRVKLLADAGV--IYHPNFEVG------------------------------RDASLPEL--------RRKHVAVLVATG 216 (456)
T ss_dssp HHHHHHHHTTC--EEETTCCBT------------------------------TTBCHHHH--------HSSCSEEEECCC
T ss_pred HHHHHHHHCCc--EEEeCCEec------------------------------cEEEhhHh--------HhhCCEEEEecC
Confidence 78888888888 777776541 01222222 246999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCccEEecCCCC---------ch-------hhhcCCCEEEEEcCCCCHHHHHHHHHHhcCC
Q 009897 189 RYSDLPNTPDFPMNKGPEVFDGKVLHSMNDD---------LA-------AELINGKRVTVIGFQKSAVDVAAEVANRNGV 252 (523)
Q Consensus 189 ~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~---------~~-------~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~ 252 (523)
+. .|+.|.+| |.+ ..| +.+..++. .. .....+|+|+|||+|.+|+|+|..+.+.+.
T Consensus 217 ~~--~~~~~~ip---G~~-~~g-v~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga- 288 (456)
T 2vdc_G 217 VY--KARDIKAP---GSG-LGN-IVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGA- 288 (456)
T ss_dssp CC--EECCTTCS---CCT-TTT-EEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTC-
T ss_pred CC--CCCCCCCC---CCc-CCC-cEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCC-
Confidence 75 36777788 654 222 33321110 00 012568999999999999999999988764
Q ss_pred ccCEEEEEeecee
Q 009897 253 RYPCTLLFKTVHW 265 (523)
Q Consensus 253 ~~~Vt~~~r~~~~ 265 (523)
++||++.|++..
T Consensus 289 -~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 289 -TSVKCLYRRDRK 300 (456)
T ss_dssp -SEEEEECSSCST
T ss_pred -CEEEEEEeCCcc
Confidence 359999998753
No 79
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.91 E-value=1.1e-24 Score=235.68 Aligned_cols=309 Identities=17% Similarity=0.228 Sum_probs=181.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccC-C-------CCCccccc--ccCcccccCCcCc----eeeCCCCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR-S-------GIGGVWSQ--TIESTKLQTPKSF----YQFSDFAWPN 94 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~-~-------~~GG~w~~--~~~~~~~~~~~~~----~~~~~~~~~~ 94 (523)
..+||+||||||+|++||..|++.|++|+|||+. + .+||+|.. ++|+..+...... .....+.+..
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~ 185 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSL 185 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCccc
Confidence 4589999999999999999999999999999973 2 47888765 3444332211100 0011111110
Q ss_pred CCCCCCCChhHHHHHHHHHHHHhCCC-------CceE-eccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEe
Q 009897 95 SVTETFPDHNKVMEYLQAYAAHFNLF-------PSIK-FDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQ 166 (523)
Q Consensus 95 ~~~~~~~~~~~~~~yl~~~~~~~~l~-------~~i~-~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 166 (523)
.......+..++.+|++.+++++... ..+. ....+..++ .|.+.+.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~--------------------------~~~v~v~ 239 (598)
T 2x8g_A 186 DRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLIS--------------------------PHEVQIT 239 (598)
T ss_dssp CGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEE--------------------------TTEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcC--------------------------CCEEEEE
Confidence 00012345577888887776543210 0111 111222222 1445544
Q ss_pred ecccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHH
Q 009897 167 EARNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEV 246 (523)
Q Consensus 167 ~~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l 246 (523)
..+ ++..++.||+||+|||+ .|+.|++| |.+.+ .+++.+.... ...+++|+|||+|.+|+|+|..+
T Consensus 240 ~~~---g~~~~~~~d~lviAtGs---~p~~p~i~---G~~~~---~~~~~~~~~~--~~~~~~vvViGgG~~g~E~A~~l 305 (598)
T 2x8g_A 240 DKN---QKVSTITGNKIILATGE---RPKYPEIP---GAVEY---GITSDDLFSL--PYFPGKTLVIGASYVALECAGFL 305 (598)
T ss_dssp CTT---CCEEEEEEEEEEECCCE---EECCCSST---THHHH---CEEHHHHTTC--SSCCCSEEEECCSHHHHHHHHHH
T ss_pred eCC---CCeEEEEeCEEEEeCCC---CCCCCCCC---Ccccc---eEcHHHHhhC--ccCCCEEEEECCCHHHHHHHHHH
Confidence 321 22236899999999995 47888888 75432 2344332221 13478999999999999999999
Q ss_pred HHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCccc
Q 009897 247 ANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKK 326 (523)
Q Consensus 247 ~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (523)
++.+.+ ||++.|. . ++|..+ ..
T Consensus 306 ~~~g~~---Vtlv~~~-~-~l~~~d-----------------------------------~~------------------ 327 (598)
T 2x8g_A 306 ASLGGD---VTVMVRS-I-LLRGFD-----------------------------------QQ------------------ 327 (598)
T ss_dssp HHTTCC---EEEEESS-C-SSTTSC-----------------------------------HH------------------
T ss_pred HHcCCE---EEEEECC-c-CcCcCC-----------------------------------HH------------------
Confidence 998754 9999986 2 333221 00
Q ss_pred CCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEe--------c---CcE----EEcCCceeee--ccE
Q 009897 327 YNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFC--------K---NGL----VIDGETTPLV--TDI 388 (523)
Q Consensus 327 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~--------~---~~v----~l~dG~~~~~--~D~ 388 (523)
+.+.+.+.+++.+|+++.+. +.++. + +.+ .+.+|++ ++ +|.
T Consensus 328 --------------------~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~-~~~~~D~ 386 (598)
T 2x8g_A 328 --------------------MAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKK-FEEEFET 386 (598)
T ss_dssp --------------------HHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCE-EEEEESE
T ss_pred --------------------HHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcE-EeccCCE
Confidence 00011122333445555542 33331 1 223 2357776 54 999
Q ss_pred EEEecCCCCCccccc--cccchhh-hhhhcCCCcccccccccCCCCCeEEecccCC--CCchhhHHHHHHHHHHHHcCC
Q 009897 389 VIFATGYKSDEKLKN--IFKSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADS--PSILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 389 VI~ATG~~~~~~l~~--~~~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~--~~~~~~ae~Qa~~~a~~l~g~ 462 (523)
||+|||++|+..++. ..+...- ...+..+ ..+.++.|+||++|.+.. ....+.+..|++.+|..+.|.
T Consensus 387 vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd------~~~~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 387 VIFAVGREPQLSKVLCETVGVKLDKNGRVVCT------DDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp EEECSCEEECGGGTBCGGGCCCBCTTSCBCCC------TTSBCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEeCCccccCccCchhcCceECCCCcEEeC------CCCcCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcC
Confidence 999999999976432 1111100 0111111 224478999999999843 335678999999999988764
No 80
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.91 E-value=7.2e-25 Score=241.38 Aligned_cols=280 Identities=17% Similarity=0.189 Sum_probs=185.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccCcccccCCcCceeeCCCCCCCCCCCCCCChhHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKV 106 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (523)
..++|+|||||++||+||..|++.|++|+|||+.+.+||.|.. .+|+ ++....+
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg------------------------~~~~~~~ 443 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPG------------------------LGEWSYH 443 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTT------------------------CGGGHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCC------------------------hHHHHHH
Confidence 3489999999999999999999999999999999999999875 1221 1122456
Q ss_pred HHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEe
Q 009897 107 MEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILC 186 (523)
Q Consensus 107 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlA 186 (523)
.+|++..++.+. ..+..++.+... ..|++.++. .+.||+||+|
T Consensus 444 ~~~~~~~i~~~~-----~~~~~~v~i~~~-------------------------~~v~~~~~~-------~~~~d~vviA 486 (729)
T 1o94_A 444 RDYRETQITKLL-----KKNKESQLALGQ-------------------------KPMTADDVL-------QYGADKVIIA 486 (729)
T ss_dssp HHHHHHHHHHHH-----HHSTTCEEECSC-------------------------CCCCHHHHH-------TSCCSEEEEC
T ss_pred HHHHHHHHHHhh-----cccCCceEEEeC-------------------------eEEehhhcc-------ccCCCEEEEc
Confidence 667766665441 001112222111 123333332 5789999999
Q ss_pred eeecCC-----CCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEc--CCCCHHHHHHHHHHhcCCccCEEEE
Q 009897 187 IGRYSD-----LPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIG--FQKSAVDVAAEVANRNGVRYPCTLL 259 (523)
Q Consensus 187 tG~~s~-----~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG--~G~sg~d~a~~l~~~~~~~~~Vt~~ 259 (523)
||+.+. .|..|++| |.+.+...+++..++... ....+++|+||| +|.+|+|+|..|++.+.+ ||++
T Consensus 487 tG~~~~~~~~~~p~~~~ip---G~~~~~~~v~~~~~~l~~-~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~---Vtlv 559 (729)
T 1o94_A 487 TGARWNTDGTNCLTHDPIP---GADASLPDQLTPEQVMDG-KKKIGKRVVILNADTYFMAPSLAEKLATAGHE---VTIV 559 (729)
T ss_dssp CCEEECSSCCCTTTSSCCT---TCCTTSTTEECHHHHHHC-CSCCCSEEEEEECCCSSHHHHHHHHHHHTTCE---EEEE
T ss_pred CCCCcccccccCccCCCCC---CccccCCCEEEHHHHhcC-CCCCCCeEEEEcCCCCchHHHHHHHHHHcCCE---EEEE
Confidence 998621 15677778 877555566666554332 234689999999 999999999999998754 9999
Q ss_pred EeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccc
Q 009897 260 FKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQI 339 (523)
Q Consensus 260 ~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 339 (523)
.|.+ +.+... .. .
T Consensus 560 ~~~~--l~~~~~-~~------------------------------~---------------------------------- 572 (729)
T 1o94_A 560 SGVH--LANYMH-FT------------------------------L---------------------------------- 572 (729)
T ss_dssp ESSC--TTHHHH-HT------------------------------T----------------------------------
T ss_pred eccc--cccccc-cc------------------------------c----------------------------------
Confidence 9876 222100 00 0
Q ss_pred cCcceeecCcchhhhccCCCEEEEecC-ceEEecCcEEEc----CCce------------------eeeccEEEEecCCC
Q 009897 340 SSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNGLVID----GETT------------------PLVTDIVIFATGYK 396 (523)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~v~l~----dG~~------------------~~~~D~VI~ATG~~ 396 (523)
....+.+.+++.+|+++.+. +.+++++++++. ++.+ .+++|.||+|+|++
T Consensus 573 -------~~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~ 645 (729)
T 1o94_A 573 -------EYPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRH 645 (729)
T ss_dssp -------CHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEE
T ss_pred -------cHHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCC
Confidence 00112233445567777664 677776665442 3322 27999999999999
Q ss_pred CCccccccccchhhhhhhcCCCcccccccccCCCCCeEEecccCCCCchhhHHHHHHHHHHHHcCCC
Q 009897 397 SDEKLKNIFKSTYFQKQITGSSAPLYREGIHPQIPQLAILGYADSPSILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 397 ~~~~l~~~~~~~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
++..+.+.+ ... . . ..+.++.|+||++|.+.....+..|..|++.+|..|.+.+
T Consensus 646 p~~~l~~~l-----~~~--v---d---~~~~t~~~~VyAiGD~~~~~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 646 SECTLWNEL-----KAR--E---S---EWAENDIKGIYLIGDAEAPRLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp ECCHHHHHH-----HHT--G---G---GTGGGTCCEEEECGGGTSCCCHHHHHHHHHHHHHTTTSSC
T ss_pred CChHHHHHH-----hhh--c---c---cccccCCCCeEEEeCccchhhHHHHHHHHHHHHHHhhhhc
Confidence 987653311 110 1 1 1234678999999998776667789999999999997754
No 81
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.91 E-value=1.6e-24 Score=236.99 Aligned_cols=316 Identities=17% Similarity=0.200 Sum_probs=187.7
Q ss_pred CCcceeeeccccccccceeeccCC---------CCCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccccc
Q 009897 3 KGEGCQITLDQQLSLSCFTVFSSG---------PKMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTI 73 (523)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~ 73 (523)
++++|...+....+..|.-++... +...+||+|||||++|+++|..|++.|++|+|||+++.+||.|....
T Consensus 337 c~~~C~~~~~~~~~~~C~~np~~~~e~~~~~~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~ 416 (671)
T 1ps9_A 337 CNQACLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK 416 (671)
T ss_dssp CCTTTHHHHHTTCCCCCSSCTTTTCTTTSCCCSCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT
T ss_pred cccccchhccCCCceEEEeCcccccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccc
Confidence 344555444444455566543321 12348999999999999999999999999999999999999876410
Q ss_pred CcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCC
Q 009897 74 ESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGK 153 (523)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~ 153 (523)
..| ......++.+++...++++++ .+++++.|..
T Consensus 417 ---------------~~~-------~~~~~~~~~~~~~~~~~~~gv--~~~~~~~v~~---------------------- 450 (671)
T 1ps9_A 417 ---------------QIP-------GKEEFYETLRYYRRMIEVTGV--TLKLNHTVTA---------------------- 450 (671)
T ss_dssp ---------------TST-------TCTTHHHHHHHHHHHHHHHTC--EEEESCCCCS----------------------
T ss_pred ---------------cCC-------CHHHHHHHHHHHHHHHHHcCC--EEEeCcEecH----------------------
Confidence 000 011224566777778888887 6777654310
Q ss_pred CCCCCCCeEEEEeecccCCcceeEE-EeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEE
Q 009897 154 PFSSSGKWNVTVQEARNVSSATEAY-QVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTV 232 (523)
Q Consensus 154 ~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~V 232 (523)
. .+ .||+||+|||+. |+.|++| |.+. ..++++.++... ....+++|+|
T Consensus 451 ---------------~-------~~~~~d~lviAtG~~---p~~~~i~---G~~~--~~v~~~~~~l~~-~~~~~~~VvV 499 (671)
T 1ps9_A 451 ---------------D-------QLQAFDETILASGIV---PRTPPID---GIDH--PKVLSYLDVLRD-KAPVGNKVAI 499 (671)
T ss_dssp ---------------S-------SSCCSSEEEECCCEE---ECCCCCB---TTTS--TTEEEHHHHHTS-CCCCCSEEEE
T ss_pred ---------------H-------HhhcCCEEEEccCCC---cCCCCCC---CCCC--CcEeeHHHHhhC-CCCCCCeEEE
Confidence 0 23 799999999964 7888888 7653 245555443222 2346899999
Q ss_pred EcCCCCHHHHHHHHHHhcCCccCEEEEEe--eceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHH
Q 009897 233 IGFQKSAVDVAAEVANRNGVRYPCTLLFK--TVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLS 310 (523)
Q Consensus 233 vG~G~sg~d~a~~l~~~~~~~~~Vt~~~r--~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (523)
||+|.+|+|+|..|++.+.. |+++.. ...|-........ .. +....|..
T Consensus 500 IGgG~~g~E~A~~l~~~G~~---vtv~~~~~~~~~g~~~~~~~~-----~~---~~~~~~~~------------------ 550 (671)
T 1ps9_A 500 IGCGGIGFDTAMYLSQPGES---TSQNIAGFCNEWGIDSSLQQA-----GG---LSPQGMQI------------------ 550 (671)
T ss_dssp ECCHHHHHHHHHHHTCCSSC---GGGCHHHHHHHTTBCTTCCSG-----GG---BCTTCCCC------------------
T ss_pred ECCChhHHHHHHHHHhcCCC---cccchhhhhhhhccccccccc-----cc---cccccccc------------------
Confidence 99999999999999987643 443110 0000000000000 00 00000000
Q ss_pred HHHHHHHHHhcCCcccCC-CCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecCcEEE-cCC--ceeee
Q 009897 311 SKVVESCLKWTFPLKKYN-MIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNGLVI-DGE--TTPLV 385 (523)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~-l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~v~l-~dG--~~~~~ 385 (523)
........ +......+. ...-+.....+.+.+++.+|+++.+. +.+++++++++ .+| ++ ++
T Consensus 551 ----------~~~~~~v~l~~~~~~~l~---~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~-i~ 616 (671)
T 1ps9_A 551 ----------PRSPRQIVMLQRKASKPG---QGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQV-LA 616 (671)
T ss_dssp ----------CCCSSEEEEECSSCSCTT---TTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEE-EC
T ss_pred ----------CCCCcEEEEEEecchhhc---cccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEE-Ee
Confidence 00000000 000000000 00000011123456677889999886 88898888887 688 45 99
Q ss_pred ccEEEEecCCCCCccccccccchhhhhhhcCCCcccccccccCCCCCeEEecccCCCCc--hhhHHHHHHHHHHHH
Q 009897 386 TDIVIFATGYKSDEKLKNIFKSTYFQKQITGSSAPLYREGIHPQIPQLAILGYADSPSI--LRTTEMRSKCLAHFL 459 (523)
Q Consensus 386 ~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~~~--~~~ae~Qa~~~a~~l 459 (523)
+|.||+|||++|+..+.+. ++ ..-+++|++|.+..... ...|..|+..+|..|
T Consensus 617 ~D~Vi~a~G~~p~~~l~~~-----l~----------------~~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 617 VDNVVICAGQEPNRALAQP-----LI----------------DSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp CSEEEECCCEEECCTTHHH-----HH----------------TTTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred CCEEEECCCccccHHHHHH-----HH----------------hcCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 9999999999998654321 11 11268999998765543 678999999998764
No 82
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.90 E-value=2e-24 Score=228.49 Aligned_cols=309 Identities=15% Similarity=0.184 Sum_probs=184.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccC--------CCCCccccc--ccCcccccCCcCceee-----CCCCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR--------SGIGGVWSQ--TIESTKLQTPKSFYQF-----SDFAWPN 94 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~--------~~~GG~w~~--~~~~~~~~~~~~~~~~-----~~~~~~~ 94 (523)
+|||+||||||+|+.||..+++.|.+|+|+|+. ..+||+|.+ +.|+..+......++. ..+.+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 489999999999999999999999999999964 358999987 6665544322111110 0011000
Q ss_pred CCCCCCCChhHHHHHHHHHHHHh-----------CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEE
Q 009897 95 SVTETFPDHNKVMEYLQAYAAHF-----------NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNV 163 (523)
Q Consensus 95 ~~~~~~~~~~~~~~yl~~~~~~~-----------~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 163 (523)
.....+...+.++.+.+.+++ ++ .+. .....-+.. ....|
T Consensus 122 --~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V--~~i-~G~a~f~~~------------------------~~v~V 172 (542)
T 4b1b_A 122 --DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKV--KYI-NGLAKLKDK------------------------NTVSY 172 (542)
T ss_dssp --EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEE-CEEEEEEET------------------------TEEEE
T ss_pred --CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEE-eeeEEEcCC------------------------CcceE
Confidence 001123345555544443332 22 111 111111111 22333
Q ss_pred EEeecccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHH
Q 009897 164 TVQEARNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVA 243 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a 243 (523)
..... .+..+++.+|++|||||+. |.+|+.+. +.+. .++.+.+..... .-+++++|||+|.+|+|+|
T Consensus 173 ~~~~~---~~~~~~i~a~~iiIATGs~---P~~P~~~~--~~~~---~~~ts~~~l~l~--~lP~~lvIIGgG~IGlE~A 239 (542)
T 4b1b_A 173 YLKGD---LSKEETVTGKYILIATGCR---PHIPDDVE--GAKE---LSITSDDIFSLK--KDPGKTLVVGASYVALECS 239 (542)
T ss_dssp EEC-----CCCEEEEEEEEEEECCCEE---ECCCSSSB--THHH---HCBCHHHHTTCS--SCCCSEEEECCSHHHHHHH
T ss_pred eeccc---CCceEEEeeeeEEeccCCC---CCCCCccc--CCCc---cccCchhhhccc--cCCceEEEECCCHHHHHHH
Confidence 33221 1223479999999999954 78875430 2111 223333333221 2378999999999999999
Q ss_pred HHHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCC
Q 009897 244 AEVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFP 323 (523)
Q Consensus 244 ~~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (523)
..++..+.+ ||++.|.. ++|..+.
T Consensus 240 ~~~~~lG~~---VTii~~~~--~L~~~D~--------------------------------------------------- 263 (542)
T 4b1b_A 240 GFLNSLGYD---VTVAVRSI--VLRGFDQ--------------------------------------------------- 263 (542)
T ss_dssp HHHHHHTCC---EEEEESSC--SSTTSCH---------------------------------------------------
T ss_pred HHHHhcCCe---EEEecccc--cccccch---------------------------------------------------
Confidence 999999865 99998743 3444320
Q ss_pred cccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecC--c--EEEcCCceeeeccEEEEecCCCCC
Q 009897 324 LKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKN--G--LVIDGETTPLVTDIVIFATGYKSD 398 (523)
Q Consensus 324 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~--~--v~l~dG~~~~~~D~VI~ATG~~~~ 398 (523)
.+...+.+.+++.+|+++.+. +.+++.. . |.+.++.+ +++|.|++|||.+|+
T Consensus 264 ----------------------ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~-~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 264 ----------------------QCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTS-ELYDTVLYAIGRKGD 320 (542)
T ss_dssp ----------------------HHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCE-EEESEEEECSCEEES
T ss_pred ----------------------hHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCe-EEEEEEEEcccccCC
Confidence 011122234445566777665 5555432 2 56778888 899999999999999
Q ss_pred ccccccccchh-hhhhhcCCCcccccccccCCCCCeEEecccCCC--CchhhHHHHHHHHHHHHcCC
Q 009897 399 EKLKNIFKSTY-FQKQITGSSAPLYREGIHPQIPQLAILGYADSP--SILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 399 ~~l~~~~~~~~-l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~--~~~~~ae~Qa~~~a~~l~g~ 462 (523)
...+.+..... +.. ......-...+.++.||||++|.+... ...+.+..|++.++..+.|.
T Consensus 321 t~~L~le~~gv~~~~---~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~g~ 384 (542)
T 4b1b_A 321 IDGLNLESLNMNVNK---SNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKD 384 (542)
T ss_dssp CGGGCGGGTTCCEET---TTTEECCCTTSBCSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred ccccCcccceeeecc---cCceEeccccccccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHhcC
Confidence 86544221110 000 000011123455789999999998643 35688999999999998775
No 83
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.90 E-value=1.4e-24 Score=229.05 Aligned_cols=309 Identities=11% Similarity=0.076 Sum_probs=182.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHC--CCceEEEccCCCCCcccccccCcccccCC-----cCceeeCCCCCCCC-----
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSGIGGVWSQTIESTKLQTP-----KSFYQFSDFAWPNS----- 95 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~-----~~~~~~~~~~~~~~----- 95 (523)
+..+||+|||||++|++||..|++. |.+|+|||+.+.++. ....++..+... ...+.|.+++..+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y--~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPY--MRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQ 86 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCB--CSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCC--CCCCCCHHhhcCCccchhhccccccccccccccccc
Confidence 3458999999999999999999887 889999999876642 111111111100 00112222211100
Q ss_pred CCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcce
Q 009897 96 VTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSAT 175 (523)
Q Consensus 96 ~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (523)
....+....++.+ ..+.++ .++++++|+.++... ++|++.++.
T Consensus 87 ~~~~~~~~~~l~~-----~~~~gv--~~~~g~~v~~id~~~------------------------~~V~~~~g~------ 129 (493)
T 1m6i_A 87 PPSFYVSAQDLPH-----IENGGV--AVLTGKKVVQLDVRD------------------------NMVKLNDGS------ 129 (493)
T ss_dssp CGGGSBCTTTTTT-----STTCEE--EEEETCCEEEEEGGG------------------------TEEEETTSC------
T ss_pred chHhhcchhhhhh-----hhcCCe--EEEcCCEEEEEECCC------------------------CEEEECCCC------
Confidence 0001111111110 122344 677888999998754 578877665
Q ss_pred eEEEeCEEEEeeeecCCCCCCCCCCCCCCCC--CCCccEEecCCCCchh----hhcCCCEEEEEcCCCCHHHHHHHHHHh
Q 009897 176 EAYQVDFVILCIGRYSDLPNTPDFPMNKGPE--VFDGKVLHSMNDDLAA----ELINGKRVTVIGFQKSAVDVAAEVANR 249 (523)
Q Consensus 176 ~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~--~~~g~~~h~~~~~~~~----~~~~~k~V~VvG~G~sg~d~a~~l~~~ 249 (523)
++.||+||+|||+. |+.|+++ +.. .+...+.......+.. ....+++|+|||+|.+|+|+|..+++.
T Consensus 130 -~i~yd~lviATGs~---p~~~~~~---~~~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~ 202 (493)
T 1m6i_A 130 -QITYEKCLIATGGT---PRSLSAI---DRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRK 202 (493)
T ss_dssp -EEEEEEEEECCCEE---ECCCHHH---HTSCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHH
T ss_pred -EEECCEEEECCCCC---CCCCCCc---ccccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhh
Confidence 79999999999965 6666554 321 1111222222211110 112489999999999999999999874
Q ss_pred cCC-ccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCC
Q 009897 250 NGV-RYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYN 328 (523)
Q Consensus 250 ~~~-~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (523)
+.. +.+|+++.+.+.+ +++.. +
T Consensus 203 ~~~~g~~V~~v~~~~~~-~~~~l--~------------------------------------------------------ 225 (493)
T 1m6i_A 203 ARALGTEVIQLFPEKGN-MGKIL--P------------------------------------------------------ 225 (493)
T ss_dssp HHHHTCEEEEECSSSST-TTTTS--C------------------------------------------------------
T ss_pred hhhcCCEEEEEecCccc-ccccC--C------------------------------------------------------
Confidence 321 1348888775431 11100 0
Q ss_pred CCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEec--C--cEEEcCCceeeeccEEEEecCCCCCccccc
Q 009897 329 MIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCK--N--GLVIDGETTPLVTDIVIFATGYKSDEKLKN 403 (523)
Q Consensus 329 l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~--~--~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~ 403 (523)
+.+...+.+.+++.+|+++.+. +.+++. + .|+++||++ +++|.||+|+|++|+..+++
T Consensus 226 ----------------~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~-i~aD~Vv~a~G~~pn~~l~~ 288 (493)
T 1m6i_A 226 ----------------EYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRK-VETDHIVAAVGLEPNVELAK 288 (493)
T ss_dssp ----------------HHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCE-EEESEEEECCCEEECCTTHH
T ss_pred ----------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCE-EECCEEEECCCCCccHHHHH
Confidence 0011122344566678888874 777753 2 377889988 99999999999999976543
Q ss_pred cccchhhh--hhhcCCCcccccccccCCCCCeEEecccCCC----------CchhhHHHHHHHHHHHHcCCC
Q 009897 404 IFKSTYFQ--KQITGSSAPLYREGIHPQIPQLAILGYADSP----------SILRTTEMRSKCLAHFLAGNS 463 (523)
Q Consensus 404 ~~~~~~l~--~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~----------~~~~~ae~Qa~~~a~~l~g~~ 463 (523)
..+...-. ..+.. ..+.+ + .|+||++|.+... ..+..|..|++.+|+.+.|..
T Consensus 289 ~~gl~~~~~~ggi~V---d~~l~---t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~ 353 (493)
T 1m6i_A 289 TGGLEIDSDFGGFRV---NAELQ---A-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAA 353 (493)
T ss_dssp HHTCCBCTTTCSEEC---CTTCE---E-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSCC
T ss_pred HcCCccccCCCcEEE---CCCcc---c-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCCC
Confidence 22211100 11111 11222 2 4999999987532 124479999999999998864
No 84
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.90 E-value=2.2e-24 Score=224.33 Aligned_cols=291 Identities=15% Similarity=0.153 Sum_probs=183.7
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLE---NGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVM 107 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~---~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (523)
++|+|||||++|+++|..|++ .|++|+|||+++.... .|.. ++. .......+++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~-----~~~~--------------~~~---~~g~~~~~~~~ 62 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF-----VPSN--------------PWV---GVGWKERDDIA 62 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC-----GGGH--------------HHH---HHTSSCHHHHE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc-----cCCc--------------ccc---ccCccCHHHHH
Confidence 799999999999999999999 8999999999764310 0000 000 01123445666
Q ss_pred HHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEee
Q 009897 108 EYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCI 187 (523)
Q Consensus 108 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAt 187 (523)
.++.+++++.++ .+. ..+|+.++... ..|++.++. ++.||+||+||
T Consensus 63 ~~l~~~~~~~gv--~~~-~~~v~~id~~~------------------------~~V~~~~g~-------~i~~d~lviAt 108 (437)
T 3sx6_A 63 FPIRHYVERKGI--HFI-AQSAEQIDAEA------------------------QNITLADGN-------TVHYDYLMIAT 108 (437)
T ss_dssp EECHHHHHTTTC--EEE-CSCEEEEETTT------------------------TEEEETTSC-------EEECSEEEECC
T ss_pred HHHHHHHHHCCC--EEE-EeEEEEEEcCC------------------------CEEEECCCC-------EEECCEEEECC
Confidence 667777887787 554 56899988754 367776664 79999999999
Q ss_pred eecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhh-------hcCCCEEEEEcCCCCH------HHHHHHHHHh----c
Q 009897 188 GRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAE-------LINGKRVTVIGFQKSA------VDVAAEVANR----N 250 (523)
Q Consensus 188 G~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~-------~~~~k~V~VvG~G~sg------~d~a~~l~~~----~ 250 (523)
|. .|+.|.+| |.+.+.+...+...+.+... ...+++++|||+|.+| +|+|..++.. +
T Consensus 109 G~---~~~~~~ip---G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g 182 (437)
T 3sx6_A 109 GP---KLAFENVP---GSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRG 182 (437)
T ss_dssp CC---EECGGGST---TCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CC---CcCcccCC---CCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcC
Confidence 95 47788888 77655444444443332211 1125678899986654 8988666543 2
Q ss_pred CC-ccC-EEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCC
Q 009897 251 GV-RYP-CTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYN 328 (523)
Q Consensus 251 ~~-~~~-Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (523)
.. ..+ ||++.+.+. +.+... .+
T Consensus 183 ~~~~~~~Vtlv~~~~~-~~~~~l-~~------------------------------------------------------ 206 (437)
T 3sx6_A 183 MRDKIPSFTFITSEPY-IGHLGI-QG------------------------------------------------------ 206 (437)
T ss_dssp CGGGCSCEEEEESSSS-TTCTTT-TC------------------------------------------------------
T ss_pred CcccCcEEEEEcCCcc-cccccc-Cc------------------------------------------------------
Confidence 21 013 999988764 111000 00
Q ss_pred CCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecCcEEEcC---------CceeeeccEEEEecCCCCC
Q 009897 329 MIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNGLVIDG---------ETTPLVTDIVIFATGYKSD 398 (523)
Q Consensus 329 l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~v~l~d---------G~~~~~~D~VI~ATG~~~~ 398 (523)
. +.....+.+.+++.+|+++.+. +.+++++++++.+ +++ +++|.|++|+|+++.
T Consensus 207 ----~-----------~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~-i~~D~vv~~~g~~~~ 270 (437)
T 3sx6_A 207 ----V-----------GDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMV-LPVKFGMMIPAFKGV 270 (437)
T ss_dssp ----C-----------TTHHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEE-EECSEEEEECCEECC
T ss_pred ----c-----------hHHHHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceE-EEEeEEEEcCCCcCc
Confidence 0 0011123345566678888875 8889888887765 566 999999999999987
Q ss_pred ccccccccchhhhhhhcCCCcccccccccCCCCCeEEecccCCC-------------CchhhHHHHHHHHHHHHc
Q 009897 399 EKLKNIFKSTYFQKQITGSSAPLYREGIHPQIPQLAILGYADSP-------------SILRTTEMRSKCLAHFLA 460 (523)
Q Consensus 399 ~~l~~~~~~~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-------------~~~~~ae~Qa~~~a~~l~ 460 (523)
..+.+..+...-...+ .....+..+++||||++|.+... .....+..|++.+|..|.
T Consensus 271 ~~~~~~~gl~~~~G~i-----~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~ 340 (437)
T 3sx6_A 271 PAVAGVEGLCNPGGFV-----LVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIK 340 (437)
T ss_dssp HHHHTSTTTBCTTSCB-----CBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred hhhhccccccCCCCcE-----EeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 5543321100000111 11122333589999999987542 235678999988877653
No 85
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.90 E-value=7.5e-24 Score=223.28 Aligned_cols=301 Identities=14% Similarity=0.165 Sum_probs=178.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|||||||++|+.+|+.|.+.+++|+|||+++.. .|. |+-........+..++...
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~--~~~--------------------PlL~~va~G~l~~~~i~~p 99 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF--LFT--------------------PLLPSAPVGTVDEKSIIEP 99 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE--ECG--------------------GGGGGTTTTSSCGGGGEEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc--ccc--------------------cchhHHhhccccHHHhhhh
Confidence 468999999999999999999999999999997632 110 0000000011111222222
Q ss_pred HHHHHHHhCCCCceE-eccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeeccc-------------CCcce
Q 009897 110 LQAYAAHFNLFPSIK-FDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARN-------------VSSAT 175 (523)
Q Consensus 110 l~~~~~~~~l~~~i~-~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~~ 175 (523)
++.+..... ..+. ...+|++|+... .+|++.+... ...+.
T Consensus 100 ~~~~~~~~~--~~v~~~~~~v~~ID~~~------------------------k~V~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (502)
T 4g6h_A 100 IVNFALKKK--GNVTYYEAEATSINPDR------------------------NTVTIKSLSAVSQLYQPENHLGLHQAEP 153 (502)
T ss_dssp HHHHHTTCS--SCEEEEEEEEEEEEGGG------------------------TEEEEEEEEEEEECSSSCCCCCCCTTCC
T ss_pred HHHHHHhhc--CCeEEEEEEEEEEEhhh------------------------CEEEEeecccceeecccccccccccCCc
Confidence 222222111 1333 346888888764 3444432100 01123
Q ss_pred eEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCch---------------------hhhcCCCEEEEEc
Q 009897 176 EAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLA---------------------AELINGKRVTVIG 234 (523)
Q Consensus 176 ~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~---------------------~~~~~~k~V~VvG 234 (523)
.++.||+||||||+ .|+.|.+| |.+.+. +......+. .+.....+++|||
T Consensus 154 ~~i~YD~LViAtGs---~~~~~~ip---G~~e~a---~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvG 224 (502)
T 4g6h_A 154 AEIKYDYLISAVGA---EPNTFGIP---GVTDYG---HFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVG 224 (502)
T ss_dssp EEEECSEEEECCCC---EECCTTCT---THHHHC---EECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEEC
T ss_pred eEEeCCEEEEcCCc---ccccCCcc---Cccccc---CCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEEC
Confidence 47999999999995 47888888 754321 111110000 0111235899999
Q ss_pred CCCCHHHHHHHHHHhcCC-----------ccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhh
Q 009897 235 FQKSAVDVAAEVANRNGV-----------RYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSL 303 (523)
Q Consensus 235 ~G~sg~d~a~~l~~~~~~-----------~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 303 (523)
+|++|+|+|.++++.... ..+|+++.+.+. ++|..+
T Consensus 225 gG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~-il~~~~-------------------------------- 271 (502)
T 4g6h_A 225 GGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI-VLNMFE-------------------------------- 271 (502)
T ss_dssp CSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSS-SSTTSC--------------------------------
T ss_pred CCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccc-cccCCC--------------------------------
Confidence 999999999999875311 135899988776 344332
Q ss_pred chHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecCcEEEc----
Q 009897 304 SPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNGLVID---- 378 (523)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~v~l~---- 378 (523)
. .+++...+.+++.+|+++.+. +.+++++++.+.
T Consensus 272 ----~-------------------------------------~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~ 310 (502)
T 4g6h_A 272 ----K-------------------------------------KLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHE 310 (502)
T ss_dssp ----H-------------------------------------HHHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECT
T ss_pred ----H-------------------------------------HHHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEec
Confidence 0 011122244556678888886 888998886653
Q ss_pred CCc---eeeeccEEEEecCCCCCccccccc---cchhh-hhhhcCCCcccccccccCCCCCeEEecccCCC---CchhhH
Q 009897 379 GET---TPLVTDIVIFATGYKSDEKLKNIF---KSTYF-QKQITGSSAPLYREGIHPQIPQLAILGYADSP---SILRTT 448 (523)
Q Consensus 379 dG~---~~~~~D~VI~ATG~~~~~~l~~~~---~~~~l-~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~---~~~~~a 448 (523)
||+ +.+++|.||||+|.+++....++. +.... ...+.. .-| +..+++||||++|++... .+.+.|
T Consensus 311 dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~V---d~~--lq~~~~~~IfAiGD~a~~~~p~~a~~A 385 (502)
T 4g6h_A 311 DGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAV---NDF--LQVKGSNNIFAIGDNAFAGLPPTAQVA 385 (502)
T ss_dssp TSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEB---CTT--SBBTTCSSEEECGGGEESSSCCCHHHH
T ss_pred CcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeE---CCc--cccCCCCCEEEEEcccCCCCCCchHHH
Confidence 553 238999999999999884322211 11000 001111 112 333689999999986532 346789
Q ss_pred HHHHHHHHHHHcCCCCCC
Q 009897 449 EMRSKCLAHFLAGNSNLP 466 (523)
Q Consensus 449 e~Qa~~~a~~l~g~~~lp 466 (523)
..||+++|++|.+....|
T Consensus 386 ~qqg~~~A~ni~~~~~~~ 403 (502)
T 4g6h_A 386 HQEAEYLAKNFDKMAQIP 403 (502)
T ss_dssp HHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 999999999997765543
No 86
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.89 E-value=5e-24 Score=222.08 Aligned_cols=164 Identities=19% Similarity=0.212 Sum_probs=116.2
Q ss_pred CCcEEEECCChHHHHHHHHHHH-C------CCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLE-N------GFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPD 102 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~-~------g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (523)
.++|+||||||+|+++|..|++ . |.+|+|||+.+.+||.|.+.. .+.++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv-----------------------~p~~~~ 59 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGV-----------------------APDHPK 59 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTS-----------------------CTTCTG
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcccccc-----------------------CCCCCC
Confidence 4799999999999999999999 7 999999999989999886411 112344
Q ss_pred hhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCE
Q 009897 103 HNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDF 182 (523)
Q Consensus 103 ~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~ 182 (523)
..++..++.++++++++ .+..+++| . . .|++.++ .+.||+
T Consensus 60 ~~~~~~~~~~~~~~~~v--~~~~~v~v------~----------------------~--~v~~~~~--------~~~~d~ 99 (456)
T 1lqt_A 60 IKSISKQFEKTAEDPRF--RFFGNVVV------G----------------------E--HVQPGEL--------SERYDA 99 (456)
T ss_dssp GGGGHHHHHHHHTSTTE--EEEESCCB------T----------------------T--TBCHHHH--------HHHSSE
T ss_pred HHHHHHHHHHHHhcCCC--EEEeeEEE------C----------------------C--EEEECCC--------eEeCCE
Confidence 56778888888877665 45555332 1 0 1333332 468999
Q ss_pred EEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCC-----------CchhhhcCCCEEEEEcCCCCHHHHHHHHHHhc-
Q 009897 183 VILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMND-----------DLAAELINGKRVTVIGFQKSAVDVAAEVANRN- 250 (523)
Q Consensus 183 vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~-----------~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~- 250 (523)
||+|||+. .|+.|++| |.+ +.+ ++++.++ .+. ..+.+++|+|||+|.+|+|+|..|++..
T Consensus 100 lViAtG~~--~~~~~~ip---G~~-~~g-v~~~~~~~~~~~~~~d~~~~~-~~~~~~~vvVIG~G~~g~e~A~~L~~~~~ 171 (456)
T 1lqt_A 100 VIYAVGAQ--SDRMLNIP---GED-LPG-SIAAVDFVGWYNAHPHFEQVS-PDLSGARAVVIGNGNVALDVARILLTDPD 171 (456)
T ss_dssp EEECCCCC--EECCCCCT---TTT-STT-EEEHHHHHHHHTTCGGGTTCC-CCCCSSEEEEECCSHHHHHHHHHHHSCHH
T ss_pred EEEeeCCC--CCCCCCCC---CCC-CCC-cEEHHHHHhhhhcCcccccch-hhcCCCEEEEECCCHHHHHHHHHHHhhhh
Confidence 99999964 26777788 765 444 4554332 122 1246899999999999999999999741
Q ss_pred -----------------CCccCEEEEEeece
Q 009897 251 -----------------GVRYPCTLLFKTVH 264 (523)
Q Consensus 251 -----------------~~~~~Vt~~~r~~~ 264 (523)
...++|+++.|++.
T Consensus 172 ~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 172 VLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp HHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred hhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 00136999999875
No 87
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.89 E-value=7.8e-23 Score=231.15 Aligned_cols=292 Identities=13% Similarity=0.119 Sum_probs=181.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.+||+||||||+|++||..|++.|++|+|||+.+.+||+|.. .+... +. .. ...++..+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~-~~k~~---------i~----------~~-~~~~~~~~ 186 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD-TAGEQ---------ID----------GM-DSSAWIEQ 186 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG-SSCCE---------ET----------TE-EHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc-CCccc---------cC----------CC-CHHHHHHH
Confidence 378999999999999999999999999999999999999883 11000 00 01 12344444
Q ss_pred HHHHHHHh-CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 110 LQAYAAHF-NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 110 l~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
+.+....+ ++ .++.+++|..+..... .. .... ..+.+.+...+.. ..+....+.||+||+|||
T Consensus 187 ~~~~l~~~~~v--~~~~~~~V~~i~~~~~--~~-----~v~~------~~~~~~v~~~~~~-~~~~~~~i~~d~lVlATG 250 (965)
T 2gag_A 187 VTSELAEAEET--THLQRTTVFGSYDANY--LI-----AAQR------RTVHLDGPSGPGV-SRERIWHIRAKQVVLATG 250 (965)
T ss_dssp HHHHHHHSTTE--EEESSEEEEEEETTTE--EE-----EEEE------CSTTCSSCCCTTC-CSEEEEEEEEEEEEECCC
T ss_pred HHHHHhhcCCc--EEEeCCEEEeeecCCc--ee-----eeEe------ecccccccccccC-CCCceEEEECCEEEECCC
Confidence 44444444 66 6778889988874320 00 0000 0001111110000 001123689999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCccEEecCCCCc---hhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeecee
Q 009897 189 RYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDL---AAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHW 265 (523)
Q Consensus 189 ~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~---~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~ 265 (523)
+. |+.|++| |.+. .| ++++....+ ......+++|+|||+|.+|+|+|..|++.+.+ ||++.+++..
T Consensus 251 s~---p~~~~ip---G~~~-~g-v~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~---Vtvv~~~~~~ 319 (965)
T 2gag_A 251 AH---ERPIVFE---NNDR-PG-IMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGV---VAVIDARSSI 319 (965)
T ss_dssp EE---ECCCCCB---TCCS-TT-EEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCC---SEEEESCSSC
T ss_pred Cc---cCCCCCC---CCCC-CC-EEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCc---EEEEECCCcc
Confidence 65 6777787 6543 22 444322111 00224579999999999999999999998754 9999987641
Q ss_pred EecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCccee
Q 009897 266 MVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFT 345 (523)
Q Consensus 266 ~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~ 345 (523)
. + .
T Consensus 320 ~-~---------------------------------------~------------------------------------- 322 (965)
T 2gag_A 320 S-A---------------------------------------A------------------------------------- 322 (965)
T ss_dssp C-H---------------------------------------H-------------------------------------
T ss_pred c-h---------------------------------------h-------------------------------------
Confidence 0 0 0
Q ss_pred ecCcchhhhccCCCEEEEecC-ceEEec--C----cEEEcC-------C--ceeeeccEEEEecCCCCCccccccccchh
Q 009897 346 VLPRNFYDRVQGGGLSLMKSR-SFTFCK--N----GLVIDG-------E--TTPLVTDIVIFATGYKSDEKLKNIFKSTY 409 (523)
Q Consensus 346 ~~~~~~~~~~~~g~v~v~~~~-i~~~~~--~----~v~l~d-------G--~~~~~~D~VI~ATG~~~~~~l~~~~~~~~ 409 (523)
.+.+++.+|+++.+. +.++.+ + +|++.+ | ++ +++|.||+|+|++|+..+.....
T Consensus 323 ------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~-i~~D~Vv~a~G~~P~~~l~~~~~--- 392 (965)
T 2gag_A 323 ------AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQR-FEADVLAVAGGFNPVVHLHSQRQ--- 392 (965)
T ss_dssp ------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEE-EECSEEEEECCEEECCHHHHHTT---
T ss_pred ------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEE-EEcCEEEECCCcCcChHHHHhCC---
Confidence 122334456666664 666654 2 466664 5 45 99999999999999976533211
Q ss_pred hhhhhcCCCcccccccc--cCCCCCeEEecccCCCCchhhHHHHHHHHHHHHcC
Q 009897 410 FQKQITGSSAPLYREGI--HPQIPQLAILGYADSPSILRTTEMRSKCLAHFLAG 461 (523)
Q Consensus 410 l~~~~~~~~~~ly~~~~--~~~~p~l~~iG~~~~~~~~~~ae~Qa~~~a~~l~g 461 (523)
..+.. ..+.+.+ .++.|+||++|.+.....+..+..|++.+|..+.+
T Consensus 393 --g~i~v---d~~~~~~v~~ts~p~IyAaGD~a~~~~l~~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 393 --GKLDW---DTTIHAFVPADAVANQHLAGAMTGRLDTASALSTGAATGAAAAT 441 (965)
T ss_dssp --CCEEE---ETTTTEEEECSCCTTEEECGGGGTCCSHHHHHHHHHHHHHHHHH
T ss_pred --CcEEE---cCcccccccCCCCCCEEEEEecCCchhHHHHHHHHHHHHHHHHH
Confidence 00110 1111211 26789999999887665556888999988887754
No 88
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.88 E-value=7.1e-23 Score=213.63 Aligned_cols=164 Identities=19% Similarity=0.199 Sum_probs=115.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC--CceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENG--FKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKV 106 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g--~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (523)
..++|+|||||++|+.+|..|++.| .+|+|||+.+.+||.|.... .+.++...++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~-----------------------~p~~~~~~~~ 61 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGV-----------------------APDHPEVKNV 61 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTS-----------------------CTTCGGGGGH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeeccc-----------------------CCCCccHHHH
Confidence 3479999999999999999999988 99999999999999886511 0122334567
Q ss_pred HHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEe
Q 009897 107 MEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILC 186 (523)
Q Consensus 107 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlA 186 (523)
..++.++++++++ .+++++.|. . .|++.+. .+.||+||+|
T Consensus 62 ~~~~~~~~~~~gv--~~~~~~~v~-----~-------------------------~V~~~~~--------~~~~d~lVlA 101 (460)
T 1cjc_A 62 INTFTQTARSDRC--AFYGNVEVG-----R-------------------------DVTVQEL--------QDAYHAVVLS 101 (460)
T ss_dssp HHHHHHHHTSTTE--EEEBSCCBT-----T-------------------------TBCHHHH--------HHHSSEEEEC
T ss_pred HHHHHHHHHhCCc--EEEeeeEEe-----e-------------------------EEEeccc--------eEEcCEEEEe
Confidence 8888888887777 666665541 1 1222222 4689999999
Q ss_pred eeecCCCCCCCCCCCCCCCCCCCccEEecCCC----------CchhhhcCCCEEEEEcCCCCHHHHHHHHHH--------
Q 009897 187 IGRYSDLPNTPDFPMNKGPEVFDGKVLHSMND----------DLAAELINGKRVTVIGFQKSAVDVAAEVAN-------- 248 (523)
Q Consensus 187 tG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~----------~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~-------- 248 (523)
||+. .|+.|++| |.+ ..+ +++..++ ......+.+++|+|||+|.+|+|+|..|++
T Consensus 102 tGs~--~~~~~~ip---G~~-~~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~t 174 (460)
T 1cjc_A 102 YGAE--DHQALDIP---GEE-LPG-VFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKT 174 (460)
T ss_dssp CCCC--EECCCCCT---TTT-STT-EEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTS
T ss_pred cCcC--CCCCCCCC---CCC-CCc-EEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccc
Confidence 9965 24677788 664 222 4443322 111112368999999999999999999994
Q ss_pred ------------hcCCccCEEEEEeece
Q 009897 249 ------------RNGVRYPCTLLFKTVH 264 (523)
Q Consensus 249 ------------~~~~~~~Vt~~~r~~~ 264 (523)
.+. ++||++.|++.
T Consensus 175 di~~~a~~~l~~~g~--~~V~lv~r~~~ 200 (460)
T 1cjc_A 175 DITEAALGALRQSRV--KTVWIVGRRGP 200 (460)
T ss_dssp CCCHHHHHHHHTCCC--CEEEEECSSCG
T ss_pred cccHHHHHHHhhCCC--cEEEEEEcCCh
Confidence 222 35999999875
No 89
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.87 E-value=3.4e-23 Score=214.95 Aligned_cols=288 Identities=15% Similarity=0.131 Sum_probs=170.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHH--CCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLE--NGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKV 106 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (523)
|.+||+|||||++|+++|..|++ .|++|+|||+++..++.-.. +... ......+++
T Consensus 1 M~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~--~~~~--------------------~g~~~~~~~ 58 (430)
T 3h28_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAF--PHLA--------------------MGWRKFEDI 58 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGH--HHHH--------------------HTCSCGGGS
T ss_pred CCCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCc--chhc--------------------cCccCHHHH
Confidence 45799999999999999999999 78999999998766532111 0000 000111222
Q ss_pred HHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEe
Q 009897 107 MEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILC 186 (523)
Q Consensus 107 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlA 186 (523)
..++.+++++.++ .+.. .+|+.++... ..|++.++. ++.||+||+|
T Consensus 59 ~~~~~~~~~~~gv--~~~~-~~v~~id~~~------------------------~~v~~~~g~-------~i~~d~liiA 104 (430)
T 3h28_A 59 SVPLAPLLPKFNI--EFIN-EKAESIDPDA------------------------NTVTTQSGK-------KIEYDYLVIA 104 (430)
T ss_dssp EEESTTTGGGGTE--EEEC-SCEEEEETTT------------------------TEEEETTCC-------EEECSEEEEC
T ss_pred HHHHHHHHHhcCC--EEEE-EEEEEEECCC------------------------CEEEECCCc-------EEECCEEEEc
Confidence 2223333445565 4554 5888888653 367766654 7999999999
Q ss_pred eeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchh-------hhcCCCEEEEEcCCCCH------HHHHHHHHH----h
Q 009897 187 IGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAA-------ELINGKRVTVIGFQKSA------VDVAAEVAN----R 249 (523)
Q Consensus 187 tG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~-------~~~~~k~V~VvG~G~sg------~d~a~~l~~----~ 249 (523)
||.. |..| |+.. .+...+.....+.. ....+++++|||+|.+| +|+|..++. .
T Consensus 105 tG~~---~~~p------g~~~-~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~ 174 (430)
T 3h28_A 105 TGPK---LVFG------AEGQ-EENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKR 174 (430)
T ss_dssp CCCE---EECC------SBTH-HHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCcc---cccC------CCCC-cCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHc
Confidence 9954 5554 3221 11111111111110 11125678899998665 898866654 2
Q ss_pred cCC-ccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCC
Q 009897 250 NGV-RYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYN 328 (523)
Q Consensus 250 ~~~-~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (523)
+.. ..+|+++.+.+. +.+... .+
T Consensus 175 g~~~~~~V~~v~~~~~-~~~~~l-~~------------------------------------------------------ 198 (430)
T 3h28_A 175 GIRYKVPMTFITSEPY-LGHFGV-GG------------------------------------------------------ 198 (430)
T ss_dssp TCGGGCCEEEECSSSS-TTCTTT-TC------------------------------------------------------
T ss_pred CCccceEEEEecCCcc-cccccc-Cc------------------------------------------------------
Confidence 211 125888877543 100000 00
Q ss_pred CCCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEecCcEEEcC----CceeeeccEEEEecCCCCCccccc
Q 009897 329 MIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCKNGLVIDG----ETTPLVTDIVIFATGYKSDEKLKN 403 (523)
Q Consensus 329 l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~~~v~l~d----G~~~~~~D~VI~ATG~~~~~~l~~ 403 (523)
.+.....+.+.+++.+|+++.+. +++++++++++++ |++ +++|.||+|+|++++..+.+
T Consensus 199 ---------------~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~~~g~~-i~~D~vv~a~G~~~~~~l~~ 262 (430)
T 3h28_A 199 ---------------IGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHE-VPAKFTMFMPSFQGPEVVAS 262 (430)
T ss_dssp ---------------STTHHHHHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEE-EECSEEEEECEEECCHHHHT
T ss_pred ---------------chHHHHHHHHHHHHCCCEEEeCCEEEEEeCCeEEEEecCCCceE-EeeeEEEECCCCccchhHhh
Confidence 00011223355666788998876 8899998999987 777 99999999999998754433
Q ss_pred c-ccchhhhh-hhcCCCcccccccccCCCCCeEEecccCCC-------------CchhhHHHHHHHHHHHH
Q 009897 404 I-FKSTYFQK-QITGSSAPLYREGIHPQIPQLAILGYADSP-------------SILRTTEMRSKCLAHFL 459 (523)
Q Consensus 404 ~-~~~~~l~~-~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~-------------~~~~~ae~Qa~~~a~~l 459 (523)
. .+...-.. .+. .......+++||||++|.+... .....+..|++.+|..|
T Consensus 263 ~~~gl~~~~G~~i~-----Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni 328 (430)
T 3h28_A 263 AGDKVANPANKMVI-----VNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNI 328 (430)
T ss_dssp TCTTTBCTTTCCBC-----CCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHH
T ss_pred ccccCcCCCCCEEe-----cCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHH
Confidence 2 11100011 111 1112333589999999987642 23567888888877754
No 90
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.84 E-value=2.6e-21 Score=220.18 Aligned_cols=165 Identities=19% Similarity=0.233 Sum_probs=113.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
.+||+||||||+|++||..|++.|+ +|+|||+.+.+||.+.+..|.. ....++.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~------------------------~~~~~~~~ 242 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQF------------------------RLPYDVVN 242 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTT------------------------TSCHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcc------------------------cCCHHHHH
Confidence 4799999999999999999999999 7999999999999876433211 11135666
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
+..++.+++++ .+++++.|.. +.|++.++. .+.||+||+|||
T Consensus 243 ~~~~~~~~~gv--~~~~~~~v~~-----------------------------~~v~~~~~~-------~~~~d~vvlAtG 284 (1025)
T 1gte_A 243 FEIELMKDLGV--KIICGKSLSE-----------------------------NEITLNTLK-------EEGYKAAFIGIG 284 (1025)
T ss_dssp HHHHHHHTTTC--EEEESCCBST-----------------------------TSBCHHHHH-------HTTCCEEEECCC
T ss_pred HHHHHHHHCCc--EEEcccEecc-----------------------------ceEEhhhcC-------ccCCCEEEEecC
Confidence 77777788887 6777765510 123333332 467999999999
Q ss_pred ecCCCCCCCCC-CCCCCCCCCCccEEecCCCCc--------------hhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCc
Q 009897 189 RYSDLPNTPDF-PMNKGPEVFDGKVLHSMNDDL--------------AAELINGKRVTVIGFQKSAVDVAAEVANRNGVR 253 (523)
Q Consensus 189 ~~s~~p~~p~~-p~~~g~~~~~g~~~h~~~~~~--------------~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~ 253 (523)
+. .|+.+++ + |++...+ ++++.++.. ......+++|+|||+|.+|+|+|..+++.+.
T Consensus 285 a~--~p~~l~~~~---G~~~~~g-v~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~-- 356 (1025)
T 1gte_A 285 LP--EPKTDDIFQ---GLTQDQG-FYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGA-- 356 (1025)
T ss_dssp CC--EECCCGGGT---TCCTTTT-EEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTC--
T ss_pred CC--CCCCCCCCC---CCCCCCC-EEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCC--
Confidence 63 3665543 4 4432222 343332211 0001236799999999999999999999874
Q ss_pred cCEEEEEeece
Q 009897 254 YPCTLLFKTVH 264 (523)
Q Consensus 254 ~~Vt~~~r~~~ 264 (523)
++||++.|++.
T Consensus 357 ~~Vtvv~r~~~ 367 (1025)
T 1gte_A 357 RRVFLVFRKGF 367 (1025)
T ss_dssp SEEEEECSSCG
T ss_pred CEEEEEEecCh
Confidence 35999999764
No 91
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.82 E-value=5.3e-20 Score=193.93 Aligned_cols=258 Identities=17% Similarity=0.147 Sum_probs=164.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEYL 110 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 110 (523)
+||+|||||++|+++|.+|++. ++|+|||+.+.+||.|..... .+.. ++ . ...+ ++
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~-----------~~~g--~~-----~--~~~~---~~ 164 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGI-----------KQEG--FN-----K--DSRK---VV 164 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCS-----------EETT--TT-----E--EHHH---HH
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeecccc-----------ccCC--CC-----C--CHHH---HH
Confidence 6999999999999999999999 999999999999998875211 0000 00 0 2233 33
Q ss_pred HHHHHHh--CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 111 QAYAAHF--NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 111 ~~~~~~~--~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
..+.+.+ ++ .++++++|.+++... ..+.+...+. ++...+.||+||+|||
T Consensus 165 ~~l~~~l~~~v--~~~~~~~v~~i~~~~----------------------~~~~~~~~~~----~~~~~~~~d~lvlAtG 216 (493)
T 1y56_A 165 EELVGKLNENT--KIYLETSALGVFDKG----------------------EYFLVPVVRG----DKLIEILAKRVVLATG 216 (493)
T ss_dssp HHHHHTCCTTE--EEETTEEECCCEECS----------------------SSEEEEEEET----TEEEEEEESCEEECCC
T ss_pred HHHHHHHhcCC--EEEcCCEEEEEEcCC----------------------cEEEEEEecC----CeEEEEECCEEEECCC
Confidence 3334433 44 567788998888754 3455544322 1234689999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCccEEecCCCCchh---hhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeecee
Q 009897 189 RYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAA---ELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHW 265 (523)
Q Consensus 189 ~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~---~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~ 265 (523)
+. |..|++| |.+. .+ +++..++.... ....+++++|||+|.+|+| ..+.+.+ |.+.....
T Consensus 217 a~---~~~~~~~---g~~~-~g-v~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle--~~l~~~G-----V~v~~~~~-- 279 (493)
T 1y56_A 217 AI---DSTMLFE---NNDM-PG-VFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI--QELERWG-----IDYVHIPN-- 279 (493)
T ss_dssp EE---ECCCCCT---TTTS-TT-EEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH--HHHHHHT-----CEEEECSS--
T ss_pred CC---ccCCCCC---CCCC-CC-EEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH--HHHHhCC-----cEEEeCCe--
Confidence 65 6777777 6542 22 33332221110 1235799999999999999 3343333 33332211
Q ss_pred EecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCccee
Q 009897 266 MVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFT 345 (523)
Q Consensus 266 ~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~ 345 (523)
T Consensus 280 -------------------------------------------------------------------------------- 279 (493)
T 1y56_A 280 -------------------------------------------------------------------------------- 279 (493)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCcchhhhccCCCEEEEecCceEEecC----cEEEcCCceeeeccEEEEecCCCCCccccccccchh-h--hhhhcCCC
Q 009897 346 VLPRNFYDRVQGGGLSLMKSRSFTFCKN----GLVIDGETTPLVTDIVIFATGYKSDEKLKNIFKSTY-F--QKQITGSS 418 (523)
Q Consensus 346 ~~~~~~~~~~~~g~v~v~~~~i~~~~~~----~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~~~~~~-l--~~~~~~~~ 418 (523)
+.++.++ .+++++|++ +++|.||+|+|++|+..+.+.++... + ...+.
T Consensus 280 ---------------------v~~i~~~~~v~~v~~~~g~~-i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~--- 334 (493)
T 1y56_A 280 ---------------------VKRVEGNEKVERVIDMNNHE-YKVDALIFADGRRPDINPITQAGGKLRFRRGYYSP--- 334 (493)
T ss_dssp ---------------------EEEEECSSSCCEEEETTCCE-EECSEEEECCCEEECCHHHHHTTCCEEEETTEEEE---
T ss_pred ---------------------eEEEecCCceEEEEeCCCeE-EEeCEEEECCCcCcCchHHHhcCCCccccCCceee---
Confidence 1122111 255678888 99999999999999976544332210 0 11111
Q ss_pred cccccccccCCCCCeEEecccCCCCchhhHHHHHHHHHHHHcCCCCC
Q 009897 419 APLYREGIHPQIPQLAILGYADSPSILRTTEMRSKCLAHFLAGNSNL 465 (523)
Q Consensus 419 ~~ly~~~~~~~~p~l~~iG~~~~~~~~~~ae~Qa~~~a~~l~g~~~l 465 (523)
.....+. +.|+||++|..........+..|++.+|..+.+.+.+
T Consensus 335 --~vd~~~~-s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~lg~ 378 (493)
T 1y56_A 335 --VLDEYHR-IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEFGY 378 (493)
T ss_dssp --CCCTTSE-EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred --ccccccC-cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHcCC
Confidence 0111122 6799999999887767788999999999988776543
No 92
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.82 E-value=1.4e-21 Score=202.68 Aligned_cols=101 Identities=10% Similarity=0.099 Sum_probs=66.9
Q ss_pred hhccCCCEEEEecC-ceEEecCcEEEcC--C--ceeeeccEEEEecCCCCCccccccccchhh-h--hhhcCCCcccccc
Q 009897 353 DRVQGGGLSLMKSR-SFTFCKNGLVIDG--E--TTPLVTDIVIFATGYKSDEKLKNIFKSTYF-Q--KQITGSSAPLYRE 424 (523)
Q Consensus 353 ~~~~~g~v~v~~~~-i~~~~~~~v~l~d--G--~~~~~~D~VI~ATG~~~~~~l~~~~~~~~l-~--~~~~~~~~~ly~~ 424 (523)
+.+++.+|+++.+. +++++++++++.+ | ++ +++|.||+|+|.+++..+.+ ...... + ..+.. . ..
T Consensus 208 ~~l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~-i~~d~vi~~~G~~~~~~~~~-~~~~l~~~~~g~i~v---d--~~ 280 (430)
T 3hyw_A 208 DLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHE-VPAKFTMFMPSFQGPEVVAS-AGDKVANPANKMVIV---N--RC 280 (430)
T ss_dssp HHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEE-EECSEEEEECEEECCHHHHT-TCTTTBCTTTCCBCC---C--TT
T ss_pred HHHHhCCeEEEeCceEEEEeCCceEEEeeCCCceE-eecceEEEeccCCCchHHHh-cccccccCCceEEEe---c--cc
Confidence 44566678998886 8899999988874 2 35 89999999999998743322 111100 0 01111 1 12
Q ss_pred cccCCCCCeEEecccCCC-------------CchhhHHHHHHHHHHHHc
Q 009897 425 GIHPQIPQLAILGYADSP-------------SILRTTEMRSKCLAHFLA 460 (523)
Q Consensus 425 ~~~~~~p~l~~iG~~~~~-------------~~~~~ae~Qa~~~a~~l~ 460 (523)
+..+++||||++|.+... .+...|..||+.+|++|.
T Consensus 281 lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~ 329 (430)
T 3hyw_A 281 FQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp SBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHH
Confidence 234789999999987542 134579999999888764
No 93
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.80 E-value=6.5e-20 Score=188.44 Aligned_cols=293 Identities=11% Similarity=0.047 Sum_probs=163.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCC--CceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENG--FKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g--~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
|+|+|||||++|+++|.+|++.+ .+|+|||+++..... |.... ... ...+.+++..
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~-----p~~~~-v~~----------------g~~~~~~~~~ 60 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC-----YMSNE-VIG----------------GDRELASLRV 60 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS-----TTHHH-HHH----------------TSSCGGGGEE
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc-----cCHHH-Hhc----------------CCCCHHHHhh
Confidence 78999999999999999999865 589999997643110 00000 000 0000011111
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
-++.+ ...++ .+. ..+|+.|++.. ..|++.++. ++.||+||+|||
T Consensus 61 ~~~~~-~~~gv--~~i-~~~v~~id~~~------------------------~~v~~~~g~-------~i~yd~LviAtG 105 (401)
T 3vrd_B 61 GYDGL-RAHGI--QVV-HDSALGIDPDK------------------------KLVKTAGGA-------EFAYDRCVVAPG 105 (401)
T ss_dssp CSHHH-HHTTC--EEE-CSCEEEEETTT------------------------TEEEETTSC-------EEECSEEEECCC
T ss_pred CHHHH-HHCCC--EEE-EeEEEEEEccC------------------------cEEEecccc-------eeecceeeeccC
Confidence 11222 23455 443 45888988754 467777765 899999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCc-cEEecCCCCch-------hhhcCCCEEEEEcCCC-------CHHHHHHHH----HHh
Q 009897 189 RYSDLPNTPDFPMNKGPEVFDG-KVLHSMNDDLA-------AELINGKRVTVIGFQK-------SAVDVAAEV----ANR 249 (523)
Q Consensus 189 ~~s~~p~~p~~p~~~g~~~~~g-~~~h~~~~~~~-------~~~~~~k~V~VvG~G~-------sg~d~a~~l----~~~ 249 (523)
+. ++.|.+| |.+...+ ...|+....+. .+.+...+.+|++.|. .+.+++.++ ...
T Consensus 106 ~~---~~~~~i~---G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~ 179 (401)
T 3vrd_B 106 ID---LLYDKIE---GYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAH 179 (401)
T ss_dssp EE---ECGGGSB---TCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHH
T ss_pred Cc---cccCCcc---CchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhc
Confidence 65 6777777 6554322 23333322211 0122334444444433 234444444 444
Q ss_pred cCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHHHHHHHHHHHHHhcCCcccCCC
Q 009897 250 NGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLWLSSKVVESCLKWTFPLKKYNM 329 (523)
Q Consensus 250 ~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 329 (523)
+.. .+|+++.+.+..... ......+...
T Consensus 180 ~~~-~~v~i~~~~~~~~~~---------------------------------------~~~~~~~~~~------------ 207 (401)
T 3vrd_B 180 KSK-SKVIILDNSQTFSKQ---------------------------------------AQFTKGWERL------------ 207 (401)
T ss_dssp CTT-CEEEEECSSSSCTTH---------------------------------------HHHHHHHHHH------------
T ss_pred CCC-CEEEEEccccccccc---------------------------------------ccccHHHHHH------------
Confidence 432 458888765541100 0000111111
Q ss_pred CCCCcccccccCcceeecCcchhhhccCCCEEEEecC-ceEEec----CcEEEcCCceeeeccEEEEecCCCCCcccccc
Q 009897 330 IPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSR-SFTFCK----NGLVIDGETTPLVTDIVIFATGYKSDEKLKNI 404 (523)
Q Consensus 330 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~-i~~~~~----~~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~ 404 (523)
+...++..+|+++.+. +..++. ..+.+.+|++ +++|.|++|+|.+++..+.+
T Consensus 208 ---------------------~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~-i~~D~vi~~~g~~~~~~~~~- 264 (401)
T 3vrd_B 208 ---------------------YGFGTENALIEWHPGPDAAVVKTDTEAMTVETSFGET-FKAAVINLIPPQRAGKIAQS- 264 (401)
T ss_dssp ---------------------SCTTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCE-EECSEEEECCCEEECHHHHH-
T ss_pred ---------------------HHHHHHhcCcEEEeCceEEEEEecccceEEEcCCCcE-EEeeEEEEecCcCCchhHhh-
Confidence 1134556678888775 555542 2388899998 99999999999998642211
Q ss_pred ccchhhhhhhcCCCccccccc-ccCCCCCeEEecccCCC----CchhhHHHHHHHHHHHH----cCCCCCC
Q 009897 405 FKSTYFQKQITGSSAPLYREG-IHPQIPQLAILGYADSP----SILRTTEMRSKCLAHFL----AGNSNLP 466 (523)
Q Consensus 405 ~~~~~l~~~~~~~~~~ly~~~-~~~~~p~l~~iG~~~~~----~~~~~ae~Qa~~~a~~l----~g~~~lp 466 (523)
.+...-...+ ..-.++ .++++||||++|.+... .+.+.+..||+.+|++| .|+.+.|
T Consensus 265 ~gl~~~~G~i-----~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G~~~~~ 330 (401)
T 3vrd_B 265 ASLTNDSGWC-----PVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKGEEPGT 330 (401)
T ss_dssp TTCCCTTSSB-----CBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred ccccccCCCE-----EECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 1110001111 111232 35789999999987542 24578899999888765 5654433
No 94
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.39 E-value=1.3e-13 Score=141.10 Aligned_cols=134 Identities=20% Similarity=0.346 Sum_probs=89.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--------ccCccc----c-cCCcCce----ee-----
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--------TIESTK----L-QTPKSFY----QF----- 87 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--------~~~~~~----~-~~~~~~~----~~----- 87 (523)
.+||+|||||++|+++|..|++.|.+|+|+|+.+.+|+.|.. ...... + ..+.... .|
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 389999999999999999999999999999999888665432 100000 0 0000000 00
Q ss_pred ------CCCCCC-CCCCCCCC--ChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCC
Q 009897 88 ------SDFAWP-NSVTETFP--DHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSS 158 (523)
Q Consensus 88 ------~~~~~~-~~~~~~~~--~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (523)
.+.++. ......|| ...++.+++.+.+++.++ .++++++|+++...+ + +..
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv--~i~~~~~v~~i~~~~--~----------------g~~ 143 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGA--KILLRSEVSQVERIQ--N----------------DEK 143 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTC--EEECSCCEEEEEECC--S----------------CSS
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCC--EEEeCCEEEEEEccc--C----------------cCC
Confidence 011111 00112223 678889999999999998 899999999998752 0 001
Q ss_pred CCeEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 159 GKWNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 159 ~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
+.|.|++.++ ++.+|+||+|||..+
T Consensus 144 ~~~~v~~~~g--------~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 144 VRFVLQVNST--------QWQCKNLIVATGGLS 168 (401)
T ss_dssp CCEEEEETTE--------EEEESEEEECCCCSS
T ss_pred CeEEEEECCC--------EEECCEEEECCCCcc
Confidence 4577765433 689999999999883
No 95
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.24 E-value=3.8e-11 Score=123.16 Aligned_cols=130 Identities=15% Similarity=0.314 Sum_probs=88.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccccc------------Cc-ccccCCcCce----ee-----
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTI------------ES-TKLQTPKSFY----QF----- 87 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~------------~~-~~~~~~~~~~----~~----- 87 (523)
.+||+|||||++|+++|..|++.|.+|+|+|+.+.+|+.+...- +. .....+.... .|
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 48999999999999999999999999999999998876552100 00 0000000000 00
Q ss_pred ------CCCCCCC-CCCCCC--CChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCC
Q 009897 88 ------SDFAWPN-SVTETF--PDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSS 158 (523)
Q Consensus 88 ------~~~~~~~-~~~~~~--~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (523)
.+.++.. .....| ....++.+++.+.+++.++ .++++++|+++...+
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv--~i~~~~~V~~i~~~~---------------------- 162 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGV--QLRLETSIGEVERTA---------------------- 162 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTC--EEECSCCEEEEEEET----------------------
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCC--EEEECCEEEEEEEeC----------------------
Confidence 0011100 001111 2456888999999999998 899999999998764
Q ss_pred CCeEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 159 GKWNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 159 ~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
+.|.|++.++ ++.+|+||+|+|..|
T Consensus 163 ~~~~V~~~~g--------~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 163 SGFRVTTSAG--------TVDAASLVVASGGKS 187 (417)
T ss_dssp TEEEEEETTE--------EEEESEEEECCCCSS
T ss_pred CEEEEEECCc--------EEEeeEEEECCCCcc
Confidence 4577776544 789999999999884
No 96
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.24 E-value=1.9e-11 Score=122.32 Aligned_cols=129 Identities=17% Similarity=0.276 Sum_probs=88.8
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCceEEEccCCCCCcccccc----cCcccccCCcCceeeCCC-------------
Q 009897 31 RKIAIIGAGVSGLLACKYTLE---NGFKPIVFEARSGIGGVWSQT----IESTKLQTPKSFYQFSDF------------- 90 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~---~g~~v~v~e~~~~~GG~w~~~----~~~~~~~~~~~~~~~~~~------------- 90 (523)
+||+|||||++|+++|..|++ .|++|+|||+++.+||.|... ++....+.....+.....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 589999999999999999999 999999999999999987752 122222222211111100
Q ss_pred ------CCCC--------CCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCC
Q 009897 91 ------AWPN--------SVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFS 156 (523)
Q Consensus 91 ------~~~~--------~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~ 156 (523)
+|.. .....+.....+..+++.++++.+. .|+++++|++|+..+
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~--~i~~~~~V~~i~~~~-------------------- 139 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGA--EVYFRHRVTQINLRD-------------------- 139 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTC--EEESSCCEEEEEECS--------------------
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCC--EEEeCCEEEEEEEcC--------------------
Confidence 1110 0011122233455667777777777 899999999999864
Q ss_pred CCCCeEEEEeecccCCcceeEEEeCEEEEeeeec
Q 009897 157 SSGKWNVTVQEARNVSSATEAYQVDFVILCIGRY 190 (523)
Q Consensus 157 ~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~ 190 (523)
++|+|++.++. ++.||.||+|+...
T Consensus 140 --~~~~v~~~~g~-------~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 140 --DKWEVSKQTGS-------PEQFDLIVLTMPVP 164 (342)
T ss_dssp --SSEEEEESSSC-------CEEESEEEECSCHH
T ss_pred --CEEEEEECCCC-------EEEcCEEEECCCHH
Confidence 56999887664 58999999999854
No 97
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.20 E-value=1.2e-10 Score=115.99 Aligned_cols=130 Identities=22% Similarity=0.329 Sum_probs=82.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc-ccCcccccCCc-------------------------
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ-TIESTKLQTPK------------------------- 82 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~-~~~~~~~~~~~------------------------- 82 (523)
|.+||+|||||++|+++|..|++.|++|+|||+.+.+||.+.. ...+...+...
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAE 80 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEE
T ss_pred CCceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeee
Confidence 4579999999999999999999999999999999999987764 11111110000
Q ss_pred ---CceeeCCCCCC--CCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCC
Q 009897 83 ---SFYQFSDFAWP--NSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSS 157 (523)
Q Consensus 83 ---~~~~~~~~~~~--~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (523)
....+.+..+. ......+.....+....+.+++ ++ .|+++++|++++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~--~i~~~~~v~~i~~~~--------------------- 135 (336)
T 1yvv_A 81 WTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DM--PVSFSCRITEVFRGE--------------------- 135 (336)
T ss_dssp ECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TC--CEECSCCEEEEEECS---------------------
T ss_pred ccccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cC--cEEecCEEEEEEEeC---------------------
Confidence 00000000000 0001111111223334444444 66 799999999999864
Q ss_pred CCCeEEEEeecccCCcceeEE-EeCEEEEeeeecC
Q 009897 158 SGKWNVTVQEARNVSSATEAY-QVDFVILCIGRYS 191 (523)
Q Consensus 158 ~~~~~v~~~~~~~~~~~~~~~-~~d~vVlAtG~~s 191 (523)
++|.|++.++. .+ .+|+||+|+|..+
T Consensus 136 -~~~~v~~~~g~-------~~~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 136 -EHWNLLDAEGQ-------NHGPFSHVIIATPAPQ 162 (336)
T ss_dssp -SCEEEEETTSC-------EEEEESEEEECSCHHH
T ss_pred -CEEEEEeCCCc-------CccccCEEEEcCCHHH
Confidence 56998876654 44 5999999999874
No 98
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.19 E-value=9.2e-11 Score=105.85 Aligned_cols=108 Identities=18% Similarity=0.334 Sum_probs=80.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEYL 110 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 110 (523)
+||+|||||++|+.+|..|.+.|.+|+|+|+.+..-... .....++.+| ......++.+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~------------~~~~~~~~~~-------~~~~~~~~~~~l 62 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV------------SRVPNYPGLL-------DEPSGEELLRRL 62 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC------------SCCCCSTTCT-------TCCCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc------------hhhhccCCCc-------CCCCHHHHHHHH
Confidence 689999999999999999999999999999976321100 0000111111 124568899999
Q ss_pred HHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeeec
Q 009897 111 QAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRY 190 (523)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~ 190 (523)
.+.++++++ .++++ +|++++... +.|.|++.++ ++.+|.||+|+|..
T Consensus 63 ~~~~~~~gv--~v~~~-~v~~i~~~~----------------------~~~~v~~~~g--------~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 63 EAHARRYGA--EVRPG-VVKGVRDMG----------------------GVFEVETEEG--------VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHTTC--EEEEC-CCCEEEECS----------------------SSEEEECSSC--------EEEEEEEEECCTTC
T ss_pred HHHHHHcCC--EEEeC-EEEEEEEcC----------------------CEEEEEECCC--------EEEECEEEECCCCC
Confidence 999999998 89999 999998754 4577776543 68999999999965
No 99
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.18 E-value=7.3e-11 Score=111.31 Aligned_cols=123 Identities=14% Similarity=0.081 Sum_probs=81.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCce-eeCCCCCCCCCCCCCCChhHH
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFY-QFSDFAWPNSVTETFPDHNKV 106 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 106 (523)
|+.+||+|||||++|+++|..|++.|.+|+|+|+.....|.|. .|...-.....++ .+.+ ..-+.+.++
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~--~~~~~~~~~~~~~~~~~d--------~~g~~~~~~ 70 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPF--LPPKPPFPPGSLLERAYD--------PKDERVWAF 70 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS--SCCCSCCCTTCHHHHHCC--------TTCCCHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCccc--CccccccchhhHHhhhcc--------CCCCCHHHH
Confidence 3568999999999999999999999999999999844434322 2211000000000 0000 011256688
Q ss_pred HHHHHHHHHHh-CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEE
Q 009897 107 MEYLQAYAAHF-NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVIL 185 (523)
Q Consensus 107 ~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVl 185 (523)
.+++.+.++++ ++ .++ +++|+++.... +..+.|.+.++. ++.+|+||+
T Consensus 71 ~~~l~~~~~~~~gv--~i~-~~~v~~i~~~~---------------------~~v~~v~~~~g~-------~i~a~~VV~ 119 (232)
T 2cul_A 71 HARAKYLLEGLRPL--HLF-QATATGLLLEG---------------------NRVVGVRTWEGP-------PARGEKVVL 119 (232)
T ss_dssp HHHHHHHHHTCTTE--EEE-ECCEEEEEEET---------------------TEEEEEEETTSC-------CEECSEEEE
T ss_pred HHHHHHHHHcCCCc--EEE-EeEEEEEEEeC---------------------CEEEEEEECCCC-------EEECCEEEE
Confidence 89999988887 76 555 67999998754 122456665553 799999999
Q ss_pred eeeecC
Q 009897 186 CIGRYS 191 (523)
Q Consensus 186 AtG~~s 191 (523)
|+|.++
T Consensus 120 A~G~~s 125 (232)
T 2cul_A 120 AVGSFL 125 (232)
T ss_dssp CCTTCS
T ss_pred CCCCCh
Confidence 999873
No 100
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.18 E-value=4.9e-11 Score=121.57 Aligned_cols=134 Identities=18% Similarity=0.215 Sum_probs=89.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc-------------ccCc----------ccccCCcCc-
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ-------------TIES----------TKLQTPKSF- 84 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~-------------~~~~----------~~~~~~~~~- 84 (523)
+.+||+|||||++|+++|..|++.|++|+|+|+.+.+|+.... ..+. .....+...
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCE
Confidence 3479999999999999999999999999999998877653322 0011 000000000
Q ss_pred -eeeCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeE-
Q 009897 85 -YQFSDFAWPNSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWN- 162 (523)
Q Consensus 85 -~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 162 (523)
..+........ ......+..+.++|.+.+++.|+ .++++++|+++...+ +.+.
T Consensus 83 ~~~~~~~~~~~~-~~~~~~~~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~~~----------------------~~v~g 137 (397)
T 3cgv_A 83 PIILQSEKAGNE-VGYVLERDKFDKHLAALAAKAGA--DVWVKSPALGVIKEN----------------------GKVAG 137 (397)
T ss_dssp CEEEC-----CC-CEEEECHHHHHHHHHHHHHHHTC--EEESSCCEEEEEEET----------------------TEEEE
T ss_pred EEEEeccccCCc-eeEEEeHHHHHHHHHHHHHhCCC--EEEECCEEEEEEEeC----------------------CEEEE
Confidence 11110000000 12234677888999999999888 899999999998764 4565
Q ss_pred EEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 163 VTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 163 v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
|++.+.. +..++.+|.||.|+|..|
T Consensus 138 v~~~~~~----~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 138 AKIRHNN----EIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEEEETT----EEEEEEEEEEEECCCTTC
T ss_pred EEEEECC----eEEEEEcCEEEECCCcch
Confidence 7765321 123799999999999874
No 101
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.16 E-value=1.2e-10 Score=124.30 Aligned_cols=134 Identities=16% Similarity=0.171 Sum_probs=87.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCc-------------------ccccccC-cccccC---CcC--
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGG-------------------VWSQTIE-STKLQT---PKS-- 83 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG-------------------~w~~~~~-~~~~~~---~~~-- 83 (523)
|.+||+|||||++|+++|..|++.|++|+|||+.+.... .|..... +..... ...
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 568999999999999999999999999999999876541 1111000 000000 000
Q ss_pred -ceeeCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeE
Q 009897 84 -FYQFSDFAWPNSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWN 162 (523)
Q Consensus 84 -~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (523)
.+.+...+.... .........+.+.|.+.+++.++ .|+++++|++++.+. +.+.
T Consensus 128 ~~~~~~~~~~~~~-~~~~i~~~~l~~~L~~~a~~~gv--~i~~~~~v~~l~~~~----------------------~~v~ 182 (570)
T 3fmw_A 128 QGLDFGLVDTRHP-YTGLVPQSRTEALLAEHAREAGA--EIPRGHEVTRLRQDA----------------------EAVE 182 (570)
T ss_dssp TCCBGGGSCCSCC-SBBCCCHHHHHHHHHHHHHHHTE--ECCBSCEEEECCBCS----------------------SCEE
T ss_pred ccccccccCCCCC-eeEEeCHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEEcC----------------------CeEE
Confidence 111111111100 12235778899999999998888 899999999998764 4588
Q ss_pred EEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 163 VTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 163 v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
|++.+.+ + .+++.+|+||.|+|..|
T Consensus 183 v~~~~~~---G-~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 183 VTVAGPS---G-PYPVRARYGVGCDGGRS 207 (570)
T ss_dssp EEEEETT---E-EEEEEESEEEECSCSSC
T ss_pred EEEEeCC---C-cEEEEeCEEEEcCCCCc
Confidence 8874321 1 13799999999999885
No 102
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.15 E-value=2e-10 Score=118.08 Aligned_cols=136 Identities=20% Similarity=0.198 Sum_probs=88.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCC----CCccccc-cc--------------------CcccccCCcC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG----IGGVWSQ-TI--------------------ESTKLQTPKS 83 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~----~GG~w~~-~~--------------------~~~~~~~~~~ 83 (523)
+.+||+|||||++|+++|..|++.|++|+|+|+.+. .|..... .. .+........
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 83 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKE 83 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCe
Confidence 347999999999999999999999999999999863 3322211 00 0000000000
Q ss_pred cee--eCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCe
Q 009897 84 FYQ--FSDFAWPNSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKW 161 (523)
Q Consensus 84 ~~~--~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (523)
... +...............+..+.+.|.+.+++.|+ .++++++|+++...+ +.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv--~i~~~~~v~~i~~~~----------------------~~~ 139 (421)
T 3nix_A 84 IADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGV--DVEYEVGVTDIKFFG----------------------TDS 139 (421)
T ss_dssp EEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTC--EEECSEEEEEEEEET----------------------TEE
T ss_pred eEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEeC----------------------CEE
Confidence 111 110000000012235678899999999999898 899999999998864 345
Q ss_pred EEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 162 NVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 162 ~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
.+.+...+ ++..++.+|.||+|+|..|
T Consensus 140 ~v~v~~~~---g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 140 VTTIEDIN---GNKREIEARFIIDASGYGR 166 (421)
T ss_dssp EEEEEETT---SCEEEEEEEEEEECCGGGC
T ss_pred EEEEEcCC---CCEEEEEcCEEEECCCCch
Confidence 55554432 2334699999999999874
No 103
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.14 E-value=1.5e-10 Score=118.37 Aligned_cols=130 Identities=22% Similarity=0.314 Sum_probs=84.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCC-----CcccccccC-cccc-------------cCCcCceeeC
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGI-----GGVWSQTIE-STKL-------------QTPKSFYQFS 88 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~-----GG~w~~~~~-~~~~-------------~~~~~~~~~~ 88 (523)
++.+||+|||||++|+++|..|++.|++|+|||+.+.+ |+.|....+ +... ..+... .+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~-~~~ 102 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGV-NIA 102 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCE-EEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccce-EEE
Confidence 45589999999999999999999999999999998653 333321110 0000 000000 000
Q ss_pred --------CC--CCCCCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCC
Q 009897 89 --------DF--AWPNSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSS 158 (523)
Q Consensus 89 --------~~--~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (523)
.. +...........+..+.++|.+.+.. . .++++++|++++...
T Consensus 103 ~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~~---------------------- 156 (398)
T 2xdo_A 103 DEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--D--TVIWDRKLVMLEPGK---------------------- 156 (398)
T ss_dssp CSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--T--SEEESCCEEEEEECS----------------------
T ss_pred CCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCC--C--EEEECCEEEEEEECC----------------------
Confidence 00 10000011223566777777665432 3 789999999999864
Q ss_pred CCeEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 159 GKWNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 159 ~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
+.|.|++.++. ++.+|.||.|+|.+|
T Consensus 157 ~~v~v~~~~g~-------~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 157 KKWTLTFENKP-------SETADLVILANGGMS 182 (398)
T ss_dssp SSEEEEETTSC-------CEEESEEEECSCTTC
T ss_pred CEEEEEECCCc-------EEecCEEEECCCcch
Confidence 46888887664 789999999999885
No 104
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.14 E-value=4.5e-11 Score=122.57 Aligned_cols=130 Identities=22% Similarity=0.229 Sum_probs=85.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcc---cc---c---------ccCccc-ccCCcCceeeCC---
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGV---WS---Q---------TIESTK-LQTPKSFYQFSD--- 89 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~---w~---~---------~~~~~~-~~~~~~~~~~~~--- 89 (523)
..+||+|||||++|+++|..|++.|++|+|||+.+.++.. .. . .++.+. ...+...+.+.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 4589999999999999999999999999999998765321 00 0 000000 000111111110
Q ss_pred ------CCCCC-----CCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCC
Q 009897 90 ------FAWPN-----SVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSS 158 (523)
Q Consensus 90 ------~~~~~-----~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (523)
++... ........+..+.++|.+.+.+ . .|+++++|++++...
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~~---------------------- 155 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--D--SVQFGKRVTRCEEDA---------------------- 155 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--G--GEEESCCEEEEEEET----------------------
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--C--EEEECCEEEEEEecC----------------------
Confidence 00000 0012234677888888888776 3 799999999999865
Q ss_pred CCeEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 159 GKWNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 159 ~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
+.+.|++.+++ ++.+|.||.|+|..|
T Consensus 156 ~~v~v~~~~g~-------~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 156 DGVTVWFTDGS-------SASGDLLIAADGSHS 181 (407)
T ss_dssp TEEEEEETTSC-------EEEESEEEECCCTTC
T ss_pred CcEEEEEcCCC-------EEeeCEEEECCCcCh
Confidence 56888887765 899999999999885
No 105
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.14 E-value=1.2e-10 Score=118.19 Aligned_cols=133 Identities=17% Similarity=0.244 Sum_probs=85.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccc-------cc----------------cCcccccCCcCce-
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWS-------QT----------------IESTKLQTPKSFY- 85 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~-------~~----------------~~~~~~~~~~~~~- 85 (523)
++||+||||||+|+++|..|++.|++|+|||+.+.+|.... .. ..+.++..+....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 48999999999999999999999999999999877653211 00 0011111111000
Q ss_pred -eeCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeE-E
Q 009897 86 -QFSDFAWPNSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWN-V 163 (523)
Q Consensus 86 -~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 163 (523)
.+.. ............+..+.++|.+.+.+.+. .++++++|+++.... +... +
T Consensus 84 ~~~~~-~~~~~~~~~~i~R~~~~~~L~~~a~~~G~--~~~~~~~v~~~~~~~----------------------~~~~~v 138 (397)
T 3oz2_A 84 IILQS-EKAGNEVGYVLERDKFDKHLAALAAKAGA--DVWVKSPALGVIKEN----------------------GKVAGA 138 (397)
T ss_dssp EEEEC-SSSSCCCEEEECHHHHHHHHHHHHHHHTC--EEESSCCEEEEEEET----------------------TEEEEE
T ss_pred eeccc-cccCCceeEEEEHHHHHHHHHHHHHhcCc--EEeeeeeeeeeeecc----------------------ceeeee
Confidence 0000 00000011124678899999999999998 899999999988764 2222 2
Q ss_pred EEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 164 TVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
..... ++..++.+|.||.|.|..|
T Consensus 139 ~~~~~----~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 139 KIRHN----NEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEEET----TEEEEEEEEEEEECCCTTC
T ss_pred eeccc----ccceEEEEeEEEeCCcccc
Confidence 22221 2344789999999999875
No 106
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.14 E-value=1.4e-10 Score=122.57 Aligned_cols=133 Identities=21% Similarity=0.379 Sum_probs=86.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCC-------ccccc--ccCccccc-----------------CCc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIG-------GVWSQ--TIESTKLQ-----------------TPK 82 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~G-------G~w~~--~~~~~~~~-----------------~~~ 82 (523)
+.+||+|||||++|+++|..|++.|++|+|||+.+.++ +.|.. ..+..... ...
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~ 185 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD 185 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEecc
Confidence 45899999999999999999999999999999987662 33332 00100000 000
Q ss_pred Cce-------eeCCCCCCCCC-CCCCC-----ChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccC
Q 009897 83 SFY-------QFSDFAWPNSV-TETFP-----DHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWG 149 (523)
Q Consensus 83 ~~~-------~~~~~~~~~~~-~~~~~-----~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~ 149 (523)
..+ .|..+..+... ....+ ....+.+.+.+.+++.++ .++++++|+++....
T Consensus 186 ~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv--~I~~~t~V~~I~~~~------------- 250 (549)
T 3nlc_A 186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGG--EIRFSTRVDDLHMED------------- 250 (549)
T ss_dssp TTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTC--EEESSCCEEEEEESS-------------
T ss_pred ccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEEeC-------------
Confidence 000 00000000000 00011 136677888888888888 899999999998764
Q ss_pred CCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 150 GTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 150 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
...+.|++.+++ ++.+|.||+|+|..+
T Consensus 251 --------~~v~gV~l~~G~-------~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 251 --------GQITGVTLSNGE-------EIKSRHVVLAVGHSA 277 (549)
T ss_dssp --------SBEEEEEETTSC-------EEECSCEEECCCTTC
T ss_pred --------CEEEEEEECCCC-------EEECCEEEECCCCCh
Confidence 233557777665 799999999999873
No 107
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.13 E-value=1.2e-12 Score=130.24 Aligned_cols=150 Identities=12% Similarity=0.091 Sum_probs=94.6
Q ss_pred CCcEEEECCChHHHHHHHHHHH--CCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLE--NGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVM 107 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (523)
++||+||||||+||+||.+|++ .|++|+|||+.+.+||.... .+.. ++...+.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~--~~~~-----------------------~~~~~l~ 119 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL--GGQL-----------------------FSAMVMR 119 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC--CSTT-----------------------CCCEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe--CCcc-----------------------CCHHHHH
Confidence 4799999999999999999975 59999999999999997653 1111 0111111
Q ss_pred HHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEee
Q 009897 108 EYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCI 187 (523)
Q Consensus 108 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAt 187 (523)
+.+..+.+++++ .+..+.. . ....+.+++++
T Consensus 120 ~~~~~~~~e~Gv--~~~~~~~----------------------------------------~-------~~~~~~~~~~~ 150 (326)
T 3fpz_A 120 KPAHLFLQELEI--PYEDEGD----------------------------------------Y-------VVVKHAALFIS 150 (326)
T ss_dssp TTTHHHHHHTTC--CCEECSS----------------------------------------E-------EEESCHHHHHH
T ss_pred HHHHHHHHHcCC--EEEECCc----------------------------------------c-------eecceeEEEEc
Confidence 112334455665 3332110 0 23344445556
Q ss_pred eecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeec
Q 009897 188 GRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTV 263 (523)
Q Consensus 188 G~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~ 263 (523)
+.. +..+.++ |.+.+.+.........+. ....+++++|||+|.++++.|..+...+. ++++..+..
T Consensus 151 ~~~---~~~~~~~---g~~~~~~~~~~~~~~~~~-~~~~~~~v~viggg~~av~~a~~~~~~~~---~v~i~~~~~ 216 (326)
T 3fpz_A 151 TVL---SKVLQLP---NVKLFNATCVEDLVTRPP-TEKGEVTVAGVVTNWTLVTQAHGTQCAMD---PNVIELAGY 216 (326)
T ss_dssp HHH---HHHHTST---TEEEETTEEEEEEEEESS-CSSSSCEEEEEEEEEHHHHTCTTSSSCCC---CEEEEESCB
T ss_pred chh---hhccccc---cceeecccccceeeccCC-cccCCCEEEEEccCceeeehhhhhhhccC---cEEEEeecc
Confidence 643 4555566 766666554443332222 34568999999999999999887777664 388876653
No 108
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.12 E-value=6.8e-11 Score=122.82 Aligned_cols=134 Identities=19% Similarity=0.300 Sum_probs=88.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccccc------C------cccccC---CcCc----eee
Q 009897 27 PKMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTI------E------STKLQT---PKSF----YQF 87 (523)
Q Consensus 27 ~~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~------~------~~~~~~---~~~~----~~~ 87 (523)
..|++||+|||||++|+++|..|++.|.+|+|+|+.+.+|+...... . .+.-.. +... ..+
T Consensus 23 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (447)
T 2i0z_A 23 NAMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIF 102 (447)
T ss_dssp --CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHS
T ss_pred ccCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhc
Confidence 34668999999999999999999999999999999888775322100 0 000000 0000 000
Q ss_pred -----------CCCCCCCC-CCCCCC---ChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCC
Q 009897 88 -----------SDFAWPNS-VTETFP---DHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTG 152 (523)
Q Consensus 88 -----------~~~~~~~~-~~~~~~---~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~ 152 (523)
.+.++... ....+| ....+.+.|.+.+++.++ .++++++|+++...+
T Consensus 103 ~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV--~i~~~~~V~~i~~~~---------------- 164 (447)
T 2i0z_A 103 NNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGV--KIRTNTPVETIEYEN---------------- 164 (447)
T ss_dssp CHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTC--EEECSCCEEEEEEET----------------
T ss_pred CHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCC--EEEeCcEEEEEEecC----------------
Confidence 01111000 001122 457888889988998888 899999999998754
Q ss_pred CCCCCCCC-eEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 153 KPFSSSGK-WNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 153 ~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
+. |.|++.++. ++.+|.||+|+|..+
T Consensus 165 ------~~v~~V~~~~G~-------~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 165 ------GQTKAVILQTGE-------VLETNHVVIAVGGKS 191 (447)
T ss_dssp ------TEEEEEEETTCC-------EEECSCEEECCCCSS
T ss_pred ------CcEEEEEECCCC-------EEECCEEEECCCCCc
Confidence 33 778776553 699999999999884
No 109
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.12 E-value=2.5e-10 Score=122.11 Aligned_cols=138 Identities=18% Similarity=0.162 Sum_probs=89.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcc------------------ccc----cc---Ccccc--c
Q 009897 27 PKMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGV------------------WSQ----TI---ESTKL--Q 79 (523)
Q Consensus 27 ~~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~------------------w~~----~~---~~~~~--~ 79 (523)
.|+.+||+|||||++|+++|..|++.|++|+|+|+.+..+.. |.. .+ .+... .
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 99 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWG 99 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEec
Confidence 344589999999999999999999999999999997543211 100 00 00000 0
Q ss_pred CCcC--ceeeCCCCCCC-CC-CCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCC
Q 009897 80 TPKS--FYQFSDFAWPN-SV-TETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPF 155 (523)
Q Consensus 80 ~~~~--~~~~~~~~~~~-~~-~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~ 155 (523)
.... .+.+....... .. ......+..+.++|.+.+++.|+ .++++++|+++....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~V~~v~~~~------------------- 158 (591)
T 3i3l_A 100 QDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGI--TVHEETPVTDVDLSD------------------- 158 (591)
T ss_dssp SSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTC--EEETTCCEEEEECCS-------------------
T ss_pred CCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEEcC-------------------
Confidence 0000 11111110000 00 11234678899999999999888 899999999998753
Q ss_pred CCCCCeEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 156 SSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 156 ~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
...+.|++.++ ++..++.+|.||.|+|..|
T Consensus 159 --g~~~~V~~~~~----G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 159 --PDRVVLTVRRG----GESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp --TTCEEEEEEET----TEEEEEEESEEEECCGGGC
T ss_pred --CCEEEEEEecC----CceEEEEcCEEEECCCCcc
Confidence 24688888732 1223799999999999885
No 110
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.11 E-value=1.2e-10 Score=118.16 Aligned_cols=129 Identities=17% Similarity=0.220 Sum_probs=85.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc--ccC---------cc-----cccCCcCceeeCC--
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ--TIE---------ST-----KLQTPKSFYQFSD-- 89 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~--~~~---------~~-----~~~~~~~~~~~~~-- 89 (523)
|..+||+|||||++|+++|..|++.|++|+|+|+.+.+++.-.. ..+ ++ ....+...+.+.+
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 88 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHN 88 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCC
Confidence 34589999999999999999999999999999998776531000 000 00 0000111111110
Q ss_pred -----CCCCCCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEE
Q 009897 90 -----FAWPNSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVT 164 (523)
Q Consensus 90 -----~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 164 (523)
++.+ .......++..+.++|.+.+.+.++ .++++++|++++. + + .|+
T Consensus 89 ~~~~~~~~~-~~~~~~~~r~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~-~----------------------~--~v~ 140 (379)
T 3alj_A 89 KSVSKETFN-GLPWRIMTRSHLHDALVNRARALGV--DISVNSEAVAADP-V----------------------G--RLT 140 (379)
T ss_dssp EEEEEECGG-GCCEEEEEHHHHHHHHHHHHHHTTC--EEESSCCEEEEET-T----------------------T--EEE
T ss_pred ceeeeccCC-CCceEEECHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEe-C----------------------C--EEE
Confidence 1110 0011234668889999999998888 8999999999976 3 3 677
Q ss_pred EeecccCCcceeEEEeCEEEEeeeecC
Q 009897 165 VQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 165 ~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
+.++. ++.+|.||.|+|..|
T Consensus 141 ~~~g~-------~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 141 LQTGE-------VLEADLIVGADGVGS 160 (379)
T ss_dssp ETTSC-------EEECSEEEECCCTTC
T ss_pred ECCCC-------EEEcCEEEECCCccH
Confidence 76654 799999999999874
No 111
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.11 E-value=4e-10 Score=115.11 Aligned_cols=131 Identities=15% Similarity=0.153 Sum_probs=83.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCC----Cccccc------ccC--c---ccccCCcCceeeCCC-C
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGI----GGVWSQ------TIE--S---TKLQTPKSFYQFSDF-A 91 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~----GG~w~~------~~~--~---~~~~~~~~~~~~~~~-~ 91 (523)
++.+||+|||||++|+++|..|++.|++|+|||+.+.. |+.+.. ... + .....+...+.+.+. .
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALT 82 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCC
Confidence 34589999999999999999999999999999998654 221110 000 0 011111111111110 0
Q ss_pred ---CCC-CCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEee
Q 009897 92 ---WPN-SVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQE 167 (523)
Q Consensus 92 ---~~~-~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 167 (523)
... ...........+.++|.+.+ -++ .++++++|++++... +.+.|++.+
T Consensus 83 g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~--~i~~~~~v~~i~~~~----------------------~~v~v~~~~ 136 (397)
T 2vou_A 83 GERVGSVPADWRFTSYDSIYGGLYELF--GPE--RYHTSKCLVGLSQDS----------------------ETVQMRFSD 136 (397)
T ss_dssp CCEEEEEECCCCEEEHHHHHHHHHHHH--CST--TEETTCCEEEEEECS----------------------SCEEEEETT
T ss_pred CCccccccCcccccCHHHHHHHHHHhC--CCc--EEEcCCEEEEEEecC----------------------CEEEEEECC
Confidence 000 00011234466777776654 255 799999999999864 468888877
Q ss_pred cccCCcceeEEEeCEEEEeeeecC
Q 009897 168 ARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 168 ~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
+. ++.+|.||.|+|.+|
T Consensus 137 g~-------~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 137 GT-------KAEANWVIGADGGAS 153 (397)
T ss_dssp SC-------EEEESEEEECCCTTC
T ss_pred CC-------EEECCEEEECCCcch
Confidence 65 799999999999885
No 112
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.11 E-value=3.8e-10 Score=118.69 Aligned_cols=139 Identities=14% Similarity=0.171 Sum_probs=92.1
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccc------c---------ccCcccccCCcCceeeCC
Q 009897 25 SGPKMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWS------Q---------TIESTKLQTPKSFYQFSD 89 (523)
Q Consensus 25 ~~~~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~------~---------~~~~~~~~~~~~~~~~~~ 89 (523)
+..++.+||+||||||+||++|..|++.|++|+|||+.+.++..-. . ..+.+.-..+.....|..
T Consensus 6 ~~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~ 85 (500)
T 2qa1_A 6 HHHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGG 85 (500)
T ss_dssp --CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETT
T ss_pred CCccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccc
Confidence 3445679999999999999999999999999999999876542111 0 011110001111122211
Q ss_pred CCC-----CCCC-CCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEE
Q 009897 90 FAW-----PNSV-TETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNV 163 (523)
Q Consensus 90 ~~~-----~~~~-~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 163 (523)
..+ .... .....++..+.++|.+.+++.++ .++++++|++++.++ +.++|
T Consensus 86 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv--~v~~~~~v~~i~~~~----------------------~~v~v 141 (500)
T 2qa1_A 86 LPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGA--DIRRGHEVLSLTDDG----------------------AGVTV 141 (500)
T ss_dssp EEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTC--EEEETCEEEEEEEET----------------------TEEEE
T ss_pred eecccccCCCCCCceeecCHHHHHHHHHHHHHHCCC--EEECCcEEEEEEEcC----------------------CeEEE
Confidence 110 0000 01223567889999999999887 899999999998864 45788
Q ss_pred EEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 164 TVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 164 ~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
++.+++ + .+++++|+||.|.|.+|
T Consensus 142 ~~~~~~---g-~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 142 EVRGPE---G-KHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EEEETT---E-EEEEEESEEEECCCTTC
T ss_pred EEEcCC---C-CEEEEeCEEEECCCcch
Confidence 877653 2 34799999999999985
No 113
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.09 E-value=1.3e-10 Score=104.85 Aligned_cols=160 Identities=14% Similarity=0.021 Sum_probs=95.7
Q ss_pred EEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHHH
Q 009897 229 RVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLLW 308 (523)
Q Consensus 229 ~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (523)
+|+|||+|.+|+++|..|++.+. +|+++.+.+..+ +...... ..|.
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~---~v~lie~~~~~~-~~~~~~~-------------~~~~----------------- 48 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGL---KVLVLDGGRSKV-KGVSRVP-------------NYPG----------------- 48 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC---CEEEEECSCCTT-TTCSCCC-------------CSTT-----------------
T ss_pred eEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCcc-cCchhhh-------------ccCC-----------------
Confidence 69999999999999999999875 499999876421 1100000 0000
Q ss_pred HHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecCceEEecC--c--EEEcCCceee
Q 009897 309 LSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSRSFTFCKN--G--LVIDGETTPL 384 (523)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~i~~~~~~--~--v~l~dG~~~~ 384 (523)
+ |. ......+.+.+.+.+++.+|+++.+.+.+++.+ + |.+++| + +
T Consensus 49 --------------------~-~~--------~~~~~~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~-i 97 (180)
T 2ywl_A 49 --------------------L-LD--------EPSGEELLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG-V-E 97 (180)
T ss_dssp --------------------C-TT--------CCCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC-E-E
T ss_pred --------------------C-cC--------CCCHHHHHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC-E-E
Confidence 0 00 000001122233444445577776676666542 2 566677 6 9
Q ss_pred eccEEEEecCCCCCccccccccchhhhhhhcCCCcccccccccCCCCCeEEecccCCCC--chhhHHHHHHHHHHHHcC
Q 009897 385 VTDIVIFATGYKSDEKLKNIFKSTYFQKQITGSSAPLYREGIHPQIPQLAILGYADSPS--ILRTTEMRSKCLAHFLAG 461 (523)
Q Consensus 385 ~~D~VI~ATG~~~~~~l~~~~~~~~l~~~~~~~~~~ly~~~~~~~~p~l~~iG~~~~~~--~~~~ae~Qa~~~a~~l~g 461 (523)
++|.||+|||.+++. .+.++.+..+..+.. ...+.++.|+||++|.+.... ....+..|++.+|..+.+
T Consensus 98 ~ad~vI~A~G~~~~~--~~~~g~~~~~g~i~v------d~~~~t~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 98 KAERLLLCTHKDPTL--PSLLGLTRRGAYIDT------DEGGRTSYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp EEEEEEECCTTCCHH--HHHHTCCEETTEECC------CTTCBCSSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred EECEEEECCCCCCCc--cccCCCCccCceEEe------CCCCCcCCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHH
Confidence 999999999999853 121222211111111 122446889999999877643 457788899988887754
No 114
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.08 E-value=1.7e-10 Score=117.96 Aligned_cols=131 Identities=13% Similarity=0.096 Sum_probs=86.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCC---ccccc------------ccCcc----------cccCCc--
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIG---GVWSQ------------TIEST----------KLQTPK-- 82 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~G---G~w~~------------~~~~~----------~~~~~~-- 82 (523)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+. ..... .++.+ ....+.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 3799999999999999999999999999999986551 10000 00000 000000
Q ss_pred CceeeCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCe
Q 009897 83 SFYQFSDFAWPNSVTETFPDHNKVMEYLQAYAAHF-NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKW 161 (523)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (523)
....+...............+..+.+.|.+.+++. ++ .++++++|++++... +++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv--~i~~~~~v~~i~~~~----------------------~~v 141 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATV--EMLFETRIEAVQRDE----------------------RHA 141 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTE--EEECSCCEEEEEECT----------------------TSC
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCc--EEEcCCEEEEEEEcC----------------------Cce
Confidence 00111100000000112356788999999988887 77 799999999998864 457
Q ss_pred --EEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 162 --NVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 162 --~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
.|++.+++ ++.+|.||.|+|..|
T Consensus 142 ~g~v~~~~g~-------~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 142 IDQVRLNDGR-------VLRPRVVVGADGIAS 166 (399)
T ss_dssp EEEEEETTSC-------EEEEEEEEECCCTTC
T ss_pred EEEEEECCCC-------EEECCEEEECCCCCh
Confidence 78876664 799999999999875
No 115
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.08 E-value=3.5e-10 Score=120.22 Aligned_cols=139 Identities=17% Similarity=0.240 Sum_probs=90.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcc-------------------ccc----ccC--cc------c
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGV-------------------WSQ----TIE--ST------K 77 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~-------------------w~~----~~~--~~------~ 77 (523)
+.+||+|||||++||++|..|++.|++|+|||+.+.++.. |.. ..+ .. .
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 83 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRL 83 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEE
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeE
Confidence 4589999999999999999999999999999998765321 100 000 00 0
Q ss_pred ccC--CcCceee-CCCCC-----C--CCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccc
Q 009897 78 LQT--PKSFYQF-SDFAW-----P--NSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDL 147 (523)
Q Consensus 78 ~~~--~~~~~~~-~~~~~-----~--~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~ 147 (523)
... ......+ ..++. . ........++..+.++|.+.+++.++ .++++++|++++... +.
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv--~i~~~~~v~~i~~~~--~~------- 152 (535)
T 3ihg_A 84 AESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGG--AIRFGTRLLSFRQHD--DD------- 152 (535)
T ss_dssp ESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTC--EEESSCEEEEEEEEC--GG-------
T ss_pred EeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEECC--CC-------
Confidence 000 0000000 00000 0 00012345788999999999999888 899999999999865 00
Q ss_pred cCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 148 WGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 148 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
....+++++.++. + ..++.+|+||.|+|..|
T Consensus 153 ---------~~~~v~v~~~~~~---~-~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 153 ---------AGAGVTARLAGPD---G-EYDLRAGYLVGADGNRS 183 (535)
T ss_dssp ---------GCSEEEEEEEETT---E-EEEEEEEEEEECCCTTC
T ss_pred ---------ccccEEEEEEcCC---C-eEEEEeCEEEECCCCcc
Confidence 0016788877753 1 34899999999999885
No 116
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.07 E-value=2.3e-10 Score=116.68 Aligned_cols=135 Identities=17% Similarity=0.167 Sum_probs=85.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCC------C--cccccc---------cCcccc-cCCcCceeeCC-
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGI------G--GVWSQT---------IESTKL-QTPKSFYQFSD- 89 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~------G--G~w~~~---------~~~~~~-~~~~~~~~~~~- 89 (523)
|++||+|||||++|+++|..|++.|++|+|+|+.+.. + +.+... ++.+.- ..+...+.+.+
T Consensus 1 m~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 80 (394)
T 1k0i_A 1 MKTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFA 80 (394)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEET
T ss_pred CCccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEEC
Confidence 5689999999999999999999999999999987642 1 111110 000000 00000011100
Q ss_pred -----CCCC---CCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCe
Q 009897 90 -----FAWP---NSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKW 161 (523)
Q Consensus 90 -----~~~~---~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (523)
+.+. .........+.++.+.|.+.+.+.++ .++++++|+++...+ ++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~--~i~~~~~v~~i~~~~---------------------~~~~ 137 (394)
T 1k0i_A 81 GQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGA--TTVYQAAEVRLHDLQ---------------------GERP 137 (394)
T ss_dssp TEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTC--EEESSCEEEEEECTT---------------------SSSC
T ss_pred CceEEeccccccCCCceEEechHHHHHHHHHHHHhcCC--eEEeceeEEEEEEec---------------------CCce
Confidence 0000 00011123557788888888888787 899999999998753 2357
Q ss_pred EEEE-eecccCCcceeEEEeCEEEEeeeecC
Q 009897 162 NVTV-QEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 162 ~v~~-~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
.|++ .++ +..++.+|.||.|+|.+|
T Consensus 138 ~v~~~~~g-----~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 138 YVTFERDG-----ERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp EEEEEETT-----EEEEEECSEEEECCCTTC
T ss_pred EEEEecCC-----cEEEEEeCEEEECCCCCc
Confidence 7877 443 223689999999999885
No 117
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.07 E-value=8.5e-10 Score=116.01 Aligned_cols=138 Identities=14% Similarity=0.129 Sum_probs=91.7
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc---------------ccCcccccCCcCceeeCCC
Q 009897 26 GPKMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ---------------TIESTKLQTPKSFYQFSDF 90 (523)
Q Consensus 26 ~~~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~---------------~~~~~~~~~~~~~~~~~~~ 90 (523)
...+.+||+||||||+||++|..|++.|++|+|||+.+.++..-.. ..+.+.-..+.....+...
T Consensus 8 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 87 (499)
T 2qa2_A 8 HHRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGR 87 (499)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTE
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecce
Confidence 3446689999999999999999999999999999998765421110 0111100011111122111
Q ss_pred CC-----CCCC-CCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEE
Q 009897 91 AW-----PNSV-TETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVT 164 (523)
Q Consensus 91 ~~-----~~~~-~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 164 (523)
.+ .... .....++..+.+.|.+.+++.++ .++++++|++++.+. +.++|+
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv--~v~~~~~v~~i~~~~----------------------~~v~v~ 143 (499)
T 2qa2_A 88 PVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGA--ELLRGHTVRALTDEG----------------------DHVVVE 143 (499)
T ss_dssp EEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTC--EEEESCEEEEEEECS----------------------SCEEEE
T ss_pred ecccccCCCCCCceEecCHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEeC----------------------CEEEEE
Confidence 10 0000 01223578889999999998887 899999999999864 458888
Q ss_pred EeecccCCcceeEEEeCEEEEeeeecC
Q 009897 165 VQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 165 ~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
+.+++ + .+++.+|+||.|.|.+|
T Consensus 144 ~~~~~---g-~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 144 VEGPD---G-PRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp EECSS---C-EEEEEEEEEEECCCTTC
T ss_pred EEcCC---C-cEEEEeCEEEEccCccc
Confidence 87653 2 34799999999999986
No 118
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.05 E-value=3e-10 Score=120.93 Aligned_cols=169 Identities=15% Similarity=0.137 Sum_probs=99.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC-CCCcccccccCccccc-----------CCc--------CceeeCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS-GIGGVWSQTIESTKLQ-----------TPK--------SFYQFSD 89 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~-~~GG~w~~~~~~~~~~-----------~~~--------~~~~~~~ 89 (523)
.+||+|||||++|++||..|++.|.+|+|+|+.. .+|.... .|..... ... ....|..
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~C--nps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~ 105 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSC--NPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRI 105 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSS--SSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccc--cccccchhhHHHHHHHHHhccHHHHHhhhcccchhh
Confidence 4899999999999999999999999999999974 3432111 1110000 000 0011110
Q ss_pred CCCCCC---C-CCCCCChhHHHHHHHHHHHH-hCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEE
Q 009897 90 FAWPNS---V-TETFPDHNKVMEYLQAYAAH-FNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVT 164 (523)
Q Consensus 90 ~~~~~~---~-~~~~~~~~~~~~yl~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 164 (523)
...... + .....++..+.+.+.+.+++ .++ .+ ++++|+++...+ +..+.|.
T Consensus 106 l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV--~I-~~~~V~~L~~e~---------------------g~V~GV~ 161 (651)
T 3ces_A 106 LNASKGPAVRATRAQADRVLYRQAVRTALENQPNL--MI-FQQAVEDLIVEN---------------------DRVVGAV 161 (651)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EECCEEEEEESS---------------------SBEEEEE
T ss_pred hhcccCcccccchhhCCHHHHHHHHHHHHHhCCCC--EE-EEEEEEEEEecC---------------------CEEEEEE
Confidence 000000 0 00112446778888888887 476 56 678999998754 1234566
Q ss_pred EeecccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHH
Q 009897 165 VQEARNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAA 244 (523)
Q Consensus 165 ~~~~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~ 244 (523)
+.++. .+.+|.||+|||.+ +..+.++ |...+. +.+ +| |.+|.+++.
T Consensus 162 t~dG~-------~I~Ad~VVLATGt~---s~~~~i~---G~~~~~-----------------~gr---iG-g~~a~eLA~ 207 (651)
T 3ces_A 162 TQMGL-------KFRAKAVVLTVGTF---LDGKIHI---GLDNYS-----------------GGR---AG-DPPSIPLSR 207 (651)
T ss_dssp ETTSE-------EEEEEEEEECCSTT---TCCEEEC---C----------------------------------CCHHHH
T ss_pred ECCCC-------EEECCEEEEcCCCC---ccCcccc---CcccCC-----------------CCC---cc-chhhhHHHH
Confidence 65553 79999999999976 3444455 544321 223 56 788999999
Q ss_pred HHHHhcCCccCEEEEEe
Q 009897 245 EVANRNGVRYPCTLLFK 261 (523)
Q Consensus 245 ~l~~~~~~~~~Vt~~~r 261 (523)
.|.+.+.. |+.+..
T Consensus 208 ~L~~lG~~---v~~~~t 221 (651)
T 3ces_A 208 RLRELPLR---VGRLKT 221 (651)
T ss_dssp HHHTTTCC---EEEECC
T ss_pred HHHhcCCe---EEEecC
Confidence 99988754 888753
No 119
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.05 E-value=1.2e-09 Score=117.12 Aligned_cols=140 Identities=15% Similarity=0.125 Sum_probs=89.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC------CCceEEEccCCCCCccccc---c--------cCccc-----cc--C----
Q 009897 29 MERKIAIIGAGVSGLLACKYTLEN------GFKPIVFEARSGIGGVWSQ---T--------IESTK-----LQ--T---- 80 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~------g~~v~v~e~~~~~GG~w~~---~--------~~~~~-----~~--~---- 80 (523)
|++||+|||||++||++|..|++. |++|+|+|+.+.+|+.... . .+... +. .
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~ 113 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDR 113 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhh
Confidence 558999999999999999999998 9999999999887764211 0 01000 00 0
Q ss_pred -----CcCceeeCCCCC--CCCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCC
Q 009897 81 -----PKSFYQFSDFAW--PNSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGK 153 (523)
Q Consensus 81 -----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~ 153 (523)
......+...|. .........++..+.++|.+.+++.++ .|+++++|+++..++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~v~~l~~~~----------------- 174 (584)
T 2gmh_A 114 FGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGV--EVYPGYAAAEILFHE----------------- 174 (584)
T ss_dssp EEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTC--EEETTCCEEEEEECT-----------------
T ss_pred eeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCC--EEEcCCEEEEEEEcC-----------------
Confidence 000111111111 000012234677899999999999888 899999999998764
Q ss_pred CCCCCCCe-EEEEeec-ccCCcc-------eeEEEeCEEEEeeeecC
Q 009897 154 PFSSSGKW-NVTVQEA-RNVSSA-------TEAYQVDFVILCIGRYS 191 (523)
Q Consensus 154 ~~~~~~~~-~v~~~~~-~~~~~~-------~~~~~~d~vVlAtG~~s 191 (523)
++.. .|.+.+. .+.+++ ..++.+|+||+|+|.+|
T Consensus 175 ----~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 175 ----DGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp ----TSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred ----CCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 2333 3655430 000111 13799999999999875
No 120
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.04 E-value=3.3e-10 Score=119.07 Aligned_cols=138 Identities=17% Similarity=0.156 Sum_probs=89.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc-ccCcc-cccCCcCce-eeCCCCCCCCCCCCCCChh
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ-TIEST-KLQTPKSFY-QFSDFAWPNSVTETFPDHN 104 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~-~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 104 (523)
.+.+||+|||||++|+++|..|++.|++|+|+|+.+.+|+.... ..+.. ......... ....+... .....+..
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~---~~~~~~~~ 166 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTG---TLDHISIR 166 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCT---TCCEEEHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccccccccc---ccccCCHH
Confidence 45689999999999999999999999999999999887754211 11100 000000000 00011111 11123457
Q ss_pred HHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEE
Q 009897 105 KVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVI 184 (523)
Q Consensus 105 ~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vV 184 (523)
++.++|.+.+++.++ .++++++|+++.... + ..+.|.|++.+.. +++..++.+|+||
T Consensus 167 ~l~~~L~~~~~~~gv--~v~~~~~v~~i~~~~--~-----------------~~~~~~v~~~~~~--~g~~~~i~ad~VV 223 (497)
T 2bry_A 167 QLQLLLLKVALLLGV--EIHWGVKFTGLQPPP--R-----------------KGSGWRAQLQPNP--PAQLASYEFDVLI 223 (497)
T ss_dssp HHHHHHHHHHHHTTC--EEEESCEEEEEECCC--S-----------------TTCCBEEEEESCC--CHHHHTCCBSEEE
T ss_pred HHHHHHHHHHHhCCC--EEEeCCEEEEEEEec--C-----------------CCCEEEEEEEECC--CCCEEEEEcCEEE
Confidence 889999999998888 899999999998742 0 0235888874320 0112268999999
Q ss_pred EeeeecC
Q 009897 185 LCIGRYS 191 (523)
Q Consensus 185 lAtG~~s 191 (523)
+|+|..|
T Consensus 224 ~A~G~~S 230 (497)
T 2bry_A 224 SAAGGKF 230 (497)
T ss_dssp ECCCTTC
T ss_pred ECCCCCc
Confidence 9999874
No 121
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.03 E-value=8.6e-10 Score=111.35 Aligned_cols=37 Identities=27% Similarity=0.416 Sum_probs=33.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGI 65 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~ 65 (523)
|.+||+|||||++|+++|..|+++|.+|+|+|+....
T Consensus 1 m~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~ 37 (372)
T 2uzz_A 1 MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPP 37 (372)
T ss_dssp -CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4689999999999999999999999999999997654
No 122
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.01 E-value=1.1e-09 Score=112.34 Aligned_cols=135 Identities=16% Similarity=0.132 Sum_probs=86.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCc-eEEEccCCCCCccccc--ccC---------cc----c-ccCCcCceeeCCC--
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFK-PIVFEARSGIGGVWSQ--TIE---------ST----K-LQTPKSFYQFSDF-- 90 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~-v~v~e~~~~~GG~w~~--~~~---------~~----~-~~~~~~~~~~~~~-- 90 (523)
.+||+|||||++|+++|..|++.|++ |+|||+.+.++..... ..+ ++ . ...+...+.+.+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 47999999999999999999999999 9999998765432111 000 00 0 0001111111110
Q ss_pred ------CCC----CCCCCCCCChhHHHHHHHHHHHH-hC-CCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCC
Q 009897 91 ------AWP----NSVTETFPDHNKVMEYLQAYAAH-FN-LFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSS 158 (523)
Q Consensus 91 ------~~~----~~~~~~~~~~~~~~~yl~~~~~~-~~-l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (523)
+.. .........+..+.++|.+.+.+ .+ . .++++++|++++. .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~--~v~~~~~v~~i~~-~---------------------- 138 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQ--AVRTGLGVERIEE-R---------------------- 138 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTT--SEEESEEEEEEEE-E----------------------
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCc--EEEECCEEEEEec-C----------------------
Confidence 000 00001224567888999888876 45 4 6999999999987 5
Q ss_pred CCeEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 159 GKWNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 159 ~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
+++.|++.+.. +++..++.+|.||.|+|..|
T Consensus 139 ~~v~v~~~~~~--~g~~~~~~ad~vV~AdG~~S 169 (410)
T 3c96_A 139 DGRVLIGARDG--HGKPQALGADVLVGADGIHS 169 (410)
T ss_dssp TTEEEEEEEET--TSCEEEEEESEEEECCCTTC
T ss_pred CccEEEEecCC--CCCceEEecCEEEECCCccc
Confidence 35888877621 11223789999999999885
No 123
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.01 E-value=1.8e-09 Score=114.11 Aligned_cols=136 Identities=12% Similarity=0.131 Sum_probs=86.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCC----CCCccccc-cc------Cccc-----ccCCc-C--------
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS----GIGGVWSQ-TI------ESTK-----LQTPK-S-------- 83 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~----~~GG~w~~-~~------~~~~-----~~~~~-~-------- 83 (523)
+++||+|||||++|+++|..|++.|++|+|||+.+ ..|..+.. .. -++. ...+. .
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~ 85 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGK 85 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecC
Confidence 34799999999999999999999999999999986 33332211 00 0000 00000 0
Q ss_pred -----ceeeCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCC
Q 009897 84 -----FYQFSDFAWPNSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSS 158 (523)
Q Consensus 84 -----~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (523)
.+.+...+...........+..+.++|.+.+++.++ .++++++|+++....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~~~~V~~v~~~~---------------------- 141 (512)
T 3e1t_A 86 EPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGV--DVRERHEVIDVLFEG---------------------- 141 (512)
T ss_dssp CSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTC--EEESSCEEEEEEEET----------------------
T ss_pred CccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEEC----------------------
Confidence 011111111100012235678899999999999888 899999999999854
Q ss_pred CCe-EEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 159 GKW-NVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 159 ~~~-~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
+.. .|++...+ ++..++.+|.||.|+|..|
T Consensus 142 ~~v~gv~~~~~d---G~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 142 ERAVGVRYRNTE---GVELMAHARFIVDASGNRT 172 (512)
T ss_dssp TEEEEEEEECSS---SCEEEEEEEEEEECCCTTC
T ss_pred CEEEEEEEEeCC---CCEEEEEcCEEEECCCcch
Confidence 222 24444321 2234799999999999875
No 124
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.01 E-value=3.1e-09 Score=116.09 Aligned_cols=131 Identities=15% Similarity=0.179 Sum_probs=87.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCc--cccc---ccCcccccC------------------------
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGG--VWSQ---TIESTKLQT------------------------ 80 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG--~w~~---~~~~~~~~~------------------------ 80 (523)
.+||+|||||++|+++|..|+++|.+|+|+|+.+.+|+ .+.. .++......
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVK 351 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCCC
Confidence 38999999999999999999999999999999766653 2222 111110000
Q ss_pred ----CcCceeeC---------------CCCC-----------------CCCC------CCCCCChhHHHHHHHHHHHHhC
Q 009897 81 ----PKSFYQFS---------------DFAW-----------------PNSV------TETFPDHNKVMEYLQAYAAHFN 118 (523)
Q Consensus 81 ----~~~~~~~~---------------~~~~-----------------~~~~------~~~~~~~~~~~~yl~~~~~~~~ 118 (523)
....+.+. +++. +... .........+.+.+.+.+++.|
T Consensus 352 ~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~~~G 431 (676)
T 3ps9_A 352 FDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQG 431 (676)
T ss_dssp CCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHHHTT
T ss_pred cCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHHhCC
Confidence 00000000 0110 0000 0112234677788888888889
Q ss_pred CCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 119 LFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 119 l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
+ .++++++|+++...+ ++|.|++.++. ++.+|.||+|+|..+
T Consensus 432 v--~i~~~t~V~~l~~~~----------------------~~v~V~t~~G~-------~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 432 L--QIYYQYQLQNFSRKD----------------------DCWLLNFAGDQ-------QATHSVVVLANGHQI 473 (676)
T ss_dssp C--EEEESCCEEEEEEET----------------------TEEEEEETTSC-------EEEESEEEECCGGGG
T ss_pred C--EEEeCCeeeEEEEeC----------------------CeEEEEECCCC-------EEECCEEEECCCcch
Confidence 8 899999999999865 45888776654 799999999999984
No 125
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.01 E-value=2.7e-09 Score=114.24 Aligned_cols=137 Identities=18% Similarity=0.224 Sum_probs=89.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccc-----------------------------c
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKL-----------------------------Q 79 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~-----------------------------~ 79 (523)
.++||+|||||++||++|..|++.|.+|+|||+.+.+||.....-.++.. .
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 35899999999999999999999999999999999888764431111100 0
Q ss_pred CCcC-------------ceeeCCCCCCC-----C--CCC------CCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEE
Q 009897 80 TPKS-------------FYQFSDFAWPN-----S--VTE------TFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSID 133 (523)
Q Consensus 80 ~~~~-------------~~~~~~~~~~~-----~--~~~------~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~ 133 (523)
.+.. .+.-.+.++.. . ... ....+..+.+.|.+.+++.++ .|+++++|+++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv--~i~~~~~v~~l~ 282 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNI--DLRMNTRGIEVL 282 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC--EEESSEEEEEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCC--EEEeCCEeeEeE
Confidence 0000 00000111110 0 000 112357888999999999998 899999999998
Q ss_pred eCCCCCcccccccccCCCCCCCCCCCC-eEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 134 RLVPSDEDEHSWDLWGGTGKPFSSSGK-WNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
.++ +++ +-|.+.+. +++..++.+|.||+|||.++
T Consensus 283 ~~~---------------------~g~v~Gv~~~~~---~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 283 KDD---------------------KGTVKGILVKGM---YKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp ECT---------------------TSCEEEEEEEET---TTEEEEEECSEEEECCCCCT
T ss_pred EcC---------------------CCeEEEEEEEeC---CCcEEEEECCeEEEeCCCcc
Confidence 753 122 33555431 12344789999999999874
No 126
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.00 E-value=2.5e-09 Score=113.86 Aligned_cols=132 Identities=14% Similarity=0.196 Sum_probs=86.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc------c---------c-----Ccccc---------cC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ------T---------I-----ESTKL---------QT 80 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~------~---------~-----~~~~~---------~~ 80 (523)
.+||+||||||+||++|..|++.|++|+|||+.+.++..... . . .+... ..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 479999999999999999999999999999998776432211 0 0 00000 00
Q ss_pred C--cCceeeCCCCCC--------CCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCC
Q 009897 81 P--KSFYQFSDFAWP--------NSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGG 150 (523)
Q Consensus 81 ~--~~~~~~~~~~~~--------~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~ 150 (523)
. .....+. ++.. ........++..+.++|.+.+++. ++++++|++++.++
T Consensus 106 ~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-----v~~~~~v~~~~~~~-------------- 165 (549)
T 2r0c_A 106 VGGHEVYRIP-LGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-----LRTRSRLDSFEQRD-------------- 165 (549)
T ss_dssp BTSCEEEEEC-CCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-----EECSEEEEEEEECS--------------
T ss_pred CCCceeEeec-ccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-----cccCcEEEEEEEeC--------------
Confidence 0 0011111 1100 000112245677888888888765 89999999998864
Q ss_pred CCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 151 TGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 151 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
+.++|++.+.. +++..++.+|+||.|+|.+|
T Consensus 166 --------~~v~v~~~~~~--~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 166 --------DHVRATITDLR--TGATRAVHARYLVACDGASS 196 (549)
T ss_dssp --------SCEEEEEEETT--TCCEEEEEEEEEEECCCTTC
T ss_pred --------CEEEEEEEECC--CCCEEEEEeCEEEECCCCCc
Confidence 45888887632 12234799999999999985
No 127
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.98 E-value=1.8e-09 Score=109.30 Aligned_cols=38 Identities=21% Similarity=0.331 Sum_probs=34.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIG 66 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~G 66 (523)
+++||+|||||++|+++|..|++.|.+|+|+|+....+
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~ 53 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGG 53 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCc
Confidence 45899999999999999999999999999999976443
No 128
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.96 E-value=2.5e-09 Score=107.47 Aligned_cols=62 Identities=16% Similarity=0.128 Sum_probs=49.2
Q ss_pred ChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeC
Q 009897 102 DHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVD 181 (523)
Q Consensus 102 ~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d 181 (523)
....+.+.|.+.+++.|. .++++++|+++.... ++.|.|++.+++ ..++.+|
T Consensus 148 ~~~~~~~~l~~~~~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~g~-----~~~~~a~ 199 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGA--QLVFHTPLIAGRVRP---------------------EGGFELDFGGAE-----PMTLSCR 199 (369)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEECSCCEEEEEECT---------------------TSSEEEEECTTS-----CEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCC--EEECCCEEEEEEEcC---------------------CceEEEEECCCc-----eeEEEeC
Confidence 346778888888888888 899999999999864 244888776552 2379999
Q ss_pred EEEEeeeecC
Q 009897 182 FVILCIGRYS 191 (523)
Q Consensus 182 ~vVlAtG~~s 191 (523)
.||+|+|.++
T Consensus 200 ~VV~A~G~~s 209 (369)
T 3dme_A 200 VLINAAGLHA 209 (369)
T ss_dssp EEEECCGGGH
T ss_pred EEEECCCcch
Confidence 9999999874
No 129
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.96 E-value=3.3e-09 Score=103.09 Aligned_cols=139 Identities=14% Similarity=0.157 Sum_probs=82.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-CCceEEEccCCCCCcc-ccc--ccCcccccCCc-CceeeCCCCCCCCCCCCC--C
Q 009897 29 MERKIAIIGAGVSGLLACKYTLEN-GFKPIVFEARSGIGGV-WSQ--TIESTKLQTPK-SFYQFSDFAWPNSVTETF--P 101 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~-g~~v~v~e~~~~~GG~-w~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~ 101 (523)
..+||+|||||++|+++|..|++. |.+|+|+|+.+.+||. |.. ....+.+..+. ..+.-.+.++... ...+ .
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~-~~~~~~~ 116 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQ-DTYVVVK 116 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEEC-SSEEEES
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccC-CCEEEec
Confidence 347999999999999999999997 9999999999888763 332 11111110000 0000001222110 0011 1
Q ss_pred ChhHHHHHHHHHHHH-hCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeec-------ccCCc
Q 009897 102 DHNKVMEYLQAYAAH-FNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEA-------RNVSS 173 (523)
Q Consensus 102 ~~~~~~~yl~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~ 173 (523)
...++...+.+.+.+ .++ .++++++|+++.... .....|.+... ....+
T Consensus 117 ~~~~~~~~l~~~~~~~~gv--~i~~~~~V~~i~~~~---------------------~~v~gv~~~~~~~~~~~~~g~~g 173 (284)
T 1rp0_A 117 HAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKG---------------------NRVGGVVTNWALVAQNHHTQSCM 173 (284)
T ss_dssp CHHHHHHHHHHHHHTSTTE--EEEETEEEEEEEEET---------------------TEEEEEEEEEHHHHTCTTTSSCC
T ss_pred CHHHHHHHHHHHHHhcCCC--EEEcCcEEEEEEecC---------------------CeEEEEEEeccccccccCccccC
Confidence 445666666665554 577 789999999998754 11123444310 00012
Q ss_pred ceeEEEeCEEEEeeeecC
Q 009897 174 ATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 174 ~~~~~~~d~vVlAtG~~s 191 (523)
+..++.+|.||+|+|..|
T Consensus 174 ~~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 174 DPNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp CCEEEEEEEEEECCCSSS
T ss_pred ceEEEECCEEEECCCCch
Confidence 234799999999999763
No 130
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.95 E-value=3.8e-09 Score=112.93 Aligned_cols=138 Identities=13% Similarity=0.147 Sum_probs=88.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccc-----------------------------
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKL----------------------------- 78 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~----------------------------- 78 (523)
..++||+|||||++||++|..|++.|.+|+|||+.+.+||.....-.++..
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 345799999999999999999999999999999998887743321000000
Q ss_pred cCCcC-------------ceeeCCCCC-----------CCCC--CCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEE
Q 009897 79 QTPKS-------------FYQFSDFAW-----------PNSV--TETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSI 132 (523)
Q Consensus 79 ~~~~~-------------~~~~~~~~~-----------~~~~--~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v 132 (523)
..+.. .+.-.+.++ +... .....++..+.+.|.+.+++.++ .|+++++|+++
T Consensus 199 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv--~i~~~~~v~~l 276 (566)
T 1qo8_A 199 NDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGI--DTRLNSRVVKL 276 (566)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTC--CEECSEEEEEE
T ss_pred CCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCC--EEEeCCEEEEE
Confidence 00000 000001111 1000 01113467888999999999998 89999999999
Q ss_pred EeCCCCCcccccccccCCCCCCCCCCCC-eEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 133 DRLVPSDEDEHSWDLWGGTGKPFSSSGK-WNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
..++ +++ +.|.+.+. +++..++.+|.||+|||.++
T Consensus 277 ~~~~---------------------~g~v~Gv~~~~~---~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 277 VVND---------------------DHSVVGAVVHGK---HTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp EECT---------------------TSBEEEEEEEET---TTEEEEEEEEEEEECCCCCT
T ss_pred EECC---------------------CCcEEEEEEEeC---CCcEEEEEcCEEEEecCCcc
Confidence 8753 122 33555432 12344689999999999885
No 131
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.95 E-value=5.2e-09 Score=108.20 Aligned_cols=58 Identities=10% Similarity=0.171 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHHHHhCCCCceEecc---EEEEEEeCCCCCcccccccccCCCCCCCCCCCCeE-EEEeecccCCcceeEE
Q 009897 103 HNKVMEYLQAYAAHFNLFPSIKFDT---KVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWN-VTVQEARNVSSATEAY 178 (523)
Q Consensus 103 ~~~~~~yl~~~~~~~~l~~~i~~~~---~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~ 178 (523)
...+.+.|.+.+++.|+ .+++++ +|+++.... +++. |++.++. ++
T Consensus 160 ~~~~~~~L~~~a~~~Gv--~i~~~t~~~~V~~i~~~~----------------------~~v~gV~t~~G~-------~i 208 (438)
T 3dje_A 160 ARNALVAAAREAQRMGV--KFVTGTPQGRVVTLIFEN----------------------NDVKGAVTADGK-------IW 208 (438)
T ss_dssp HHHHHHHHHHHHHHTTC--EEEESTTTTCEEEEEEET----------------------TEEEEEEETTTE-------EE
T ss_pred HHHHHHHHHHHHHhcCC--EEEeCCcCceEEEEEecC----------------------CeEEEEEECCCC-------EE
Confidence 45788888888988898 899999 999998754 4576 7776664 79
Q ss_pred EeCEEEEeeeecC
Q 009897 179 QVDFVILCIGRYS 191 (523)
Q Consensus 179 ~~d~vVlAtG~~s 191 (523)
.+|.||+|+|.++
T Consensus 209 ~Ad~VV~AtG~~s 221 (438)
T 3dje_A 209 RAERTFLCAGASA 221 (438)
T ss_dssp ECSEEEECCGGGG
T ss_pred ECCEEEECCCCCh
Confidence 9999999999984
No 132
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.94 E-value=1.3e-09 Score=113.34 Aligned_cols=134 Identities=14% Similarity=0.053 Sum_probs=85.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCC--Cccccc------ccCcccccCCc---------CceeeCCC--
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGI--GGVWSQ------TIESTKLQTPK---------SFYQFSDF-- 90 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~--GG~w~~------~~~~~~~~~~~---------~~~~~~~~-- 90 (523)
.+||+|||||++|+++|..|++.|++|+|+|+.+.. |..+.. .+..+.+..+. ....+...
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 479999999999999999999999999999998753 222211 01111000000 00001000
Q ss_pred ---CCCCCCCCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeE-EEEe
Q 009897 91 ---AWPNSVTETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWN-VTVQ 166 (523)
Q Consensus 91 ---~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~ 166 (523)
+++. .....++..+.+.|.+.+.+.++ .++++++|+++.... +... |++.
T Consensus 86 ~~~~~~~--~~~~i~r~~l~~~L~~~a~~~gv--~i~~~~~v~~i~~~~----------------------~~v~gv~~~ 139 (453)
T 3atr_A 86 TVWTVNG--EGFELNAPLYNQRVLKEAQDRGV--EIWDLTTAMKPIFED----------------------GYVKGAVLF 139 (453)
T ss_dssp CEEEEEE--EEEEECHHHHHHHHHHHHHHTTC--EEESSEEEEEEEEET----------------------TEEEEEEEE
T ss_pred eEEeECC--CcEEEcHHHHHHHHHHHHHHcCC--EEEeCcEEEEEEEEC----------------------CEEEEEEEE
Confidence 0000 01224667889999999988888 899999999998754 3333 5555
Q ss_pred ecccCCcceeEEEeCEEEEeeeecC
Q 009897 167 EARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 167 ~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
+.. +++..++.+|.||.|+|..|
T Consensus 140 ~~~--~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 140 NRR--TNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp ETT--TTEEEEEECSEEEECCGGGC
T ss_pred EcC--CCceEEEEcCEEEECcCCch
Confidence 321 12234789999999999885
No 133
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.92 E-value=8.9e-09 Score=104.29 Aligned_cols=58 Identities=10% Similarity=0.075 Sum_probs=46.6
Q ss_pred ChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeE-EEEeecccCCcceeEEEe
Q 009897 102 DHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWN-VTVQEARNVSSATEAYQV 180 (523)
Q Consensus 102 ~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~ 180 (523)
....+.+.+.+.+++.++ .+.++++|+++.... +.|. |++.++ ++.+
T Consensus 147 ~~~~l~~~l~~~~~~~Gv--~i~~~~~v~~i~~~~----------------------~~v~gv~~~~g--------~i~a 194 (382)
T 1y56_B 147 DPFEATTAFAVKAKEYGA--KLLEYTEVKGFLIEN----------------------NEIKGVKTNKG--------IIKT 194 (382)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEECSCCEEEEEESS----------------------SBEEEEEETTE--------EEEC
T ss_pred CHHHHHHHHHHHHHHCCC--EEECCceEEEEEEEC----------------------CEEEEEEECCc--------EEEC
Confidence 456778888888888888 899999999999764 4566 665433 6899
Q ss_pred CEEEEeeeecC
Q 009897 181 DFVILCIGRYS 191 (523)
Q Consensus 181 d~vVlAtG~~s 191 (523)
|.||+|+|..+
T Consensus 195 ~~VV~A~G~~s 205 (382)
T 1y56_B 195 GIVVNATNAWA 205 (382)
T ss_dssp SEEEECCGGGH
T ss_pred CEEEECcchhH
Confidence 99999999874
No 134
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.92 E-value=5.6e-09 Score=106.59 Aligned_cols=39 Identities=26% Similarity=0.408 Sum_probs=35.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHH-CC-CceEEEccCCCCC
Q 009897 27 PKMERKIAIIGAGVSGLLACKYTLE-NG-FKPIVFEARSGIG 66 (523)
Q Consensus 27 ~~~~~~v~IIGaG~aGl~aA~~l~~-~g-~~v~v~e~~~~~G 66 (523)
+++++||+|||||++|+++|..|++ +| .+|+|+|+.. +|
T Consensus 18 ~~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~-~~ 58 (405)
T 2gag_B 18 PKKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW-LA 58 (405)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS-TT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC-CC
Confidence 3456899999999999999999999 99 9999999987 44
No 135
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.92 E-value=2.2e-09 Score=108.55 Aligned_cols=58 Identities=14% Similarity=0.280 Sum_probs=46.9
Q ss_pred ChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeC
Q 009897 102 DHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVD 181 (523)
Q Consensus 102 ~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d 181 (523)
....+.+.|.+.+++.|. .++++++|+++.... +.|.|++.++ ++.+|
T Consensus 152 ~~~~~~~~l~~~a~~~Gv--~i~~~~~V~~i~~~~----------------------~~~~V~t~~g--------~i~a~ 199 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQG--QVLCNHEALEIRRVD----------------------GAWEVRCDAG--------SYRAA 199 (381)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEESSCCCCEEEEET----------------------TEEEEECSSE--------EEEES
T ss_pred CHHHHHHHHHHHHHHCCC--EEEcCCEEEEEEEeC----------------------CeEEEEeCCC--------EEEcC
Confidence 346777788888888888 899999999999864 4577776544 78999
Q ss_pred EEEEeeeecC
Q 009897 182 FVILCIGRYS 191 (523)
Q Consensus 182 ~vVlAtG~~s 191 (523)
+||+|+|.++
T Consensus 200 ~VV~A~G~~s 209 (381)
T 3nyc_A 200 VLVNAAGAWC 209 (381)
T ss_dssp EEEECCGGGH
T ss_pred EEEECCChhH
Confidence 9999999874
No 136
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.91 E-value=6.1e-10 Score=118.19 Aligned_cols=169 Identities=17% Similarity=0.158 Sum_probs=104.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC-CCCcccccccCccccc-----------CC--------cCceeeCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS-GIGGVWSQTIESTKLQ-----------TP--------KSFYQFSD 89 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~-~~GG~w~~~~~~~~~~-----------~~--------~~~~~~~~ 89 (523)
.+||+|||||++|++||..|++.|.+|+|+|+.. .+|+.- +.|..... .. .....|..
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~--Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~ 104 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMS--CNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKM 104 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCC--SCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcC--ccccccccchHHHHHHHHHhhhHHHHHhhhcccceee
Confidence 4899999999999999999999999999999974 444311 11110000 00 00011110
Q ss_pred CCCCCC---C-CCCCCChhHHHHHHHHHHHHh-CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEE
Q 009897 90 FAWPNS---V-TETFPDHNKVMEYLQAYAAHF-NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVT 164 (523)
Q Consensus 90 ~~~~~~---~-~~~~~~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 164 (523)
...... + ......+..+.+++.+.++++ ++ .+ ++++|+++..++ +..+.|.
T Consensus 105 l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GV--eI-~~~~Vt~L~~e~---------------------g~V~GV~ 160 (637)
T 2zxi_A 105 LNTRKGKAVQSPRAQADKKRYREYMKKVCENQENL--YI-KQEEVVDIIVKN---------------------NQVVGVR 160 (637)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EESCEEEEEESS---------------------SBEEEEE
T ss_pred cccccCccccchhhhCCHHHHHHHHHHHHHhCCCC--EE-EEeEEEEEEecC---------------------CEEEEEE
Confidence 000000 0 001124567888888888874 66 56 678999988754 1224566
Q ss_pred EeecccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHH
Q 009897 165 VQEARNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAA 244 (523)
Q Consensus 165 ~~~~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~ 244 (523)
+.++. .+.+|.||+|||.+ ++.+.++ |...+. +.+ + |+.++.+++.
T Consensus 161 t~dG~-------~i~AdaVVLATG~~---s~~~~~~---G~~~~~-----------------~Gr---~-G~~~A~~la~ 206 (637)
T 2zxi_A 161 TNLGV-------EYKTKAVVVTTGTF---LNGVIYI---GDKMIP-----------------GGR---L-GEPRSEGLSD 206 (637)
T ss_dssp ETTSC-------EEECSEEEECCTTC---BTCEEEE---TTEEEE-----------------CSB---T-TBCCBCTHHH
T ss_pred ECCCc-------EEEeCEEEEccCCC---ccCceec---cceecC-----------------CCC---C-CchhHHHHHH
Confidence 66554 79999999999976 4444455 543221 122 2 3678899999
Q ss_pred HHHHhcCCccCEEEEEe
Q 009897 245 EVANRNGVRYPCTLLFK 261 (523)
Q Consensus 245 ~l~~~~~~~~~Vt~~~r 261 (523)
.|.+.+.. ++.+.+
T Consensus 207 ~L~~lG~~---v~~l~t 220 (637)
T 2zxi_A 207 FYRRFDFP---LIRFKT 220 (637)
T ss_dssp HHHHTTCC---CEEEEE
T ss_pred HHHhcCCc---eEEecC
Confidence 99998754 666654
No 137
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.90 E-value=6.6e-09 Score=105.42 Aligned_cols=38 Identities=21% Similarity=0.304 Sum_probs=34.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIG 66 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~G 66 (523)
|.+||+|||||++|+++|..|+++|.+|+|+|+....+
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 56899999999999999999999999999999976544
No 138
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.86 E-value=1e-08 Score=104.65 Aligned_cols=35 Identities=29% Similarity=0.477 Sum_probs=32.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGI 65 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~ 65 (523)
.+|+||||||+||++|..|++.|++|+|||+.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 47999999999999999999999999999997654
No 139
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.85 E-value=2e-08 Score=109.85 Aligned_cols=132 Identities=15% Similarity=0.166 Sum_probs=85.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCc--cccc---ccCcccc--------------------------
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGG--VWSQ---TIESTKL-------------------------- 78 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG--~w~~---~~~~~~~-------------------------- 78 (523)
.+||+|||||++|+++|..|+++|.+|+|+|+.+.+|+ .+.. .++....
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~ 343 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLLEQ 343 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhhhh
Confidence 48999999999999999999999999999999766653 2221 1111000
Q ss_pred --cC---CcCceeeC---------------CCCC-----------------CCCC------CCCCCChhHHHHHHHHHHH
Q 009897 79 --QT---PKSFYQFS---------------DFAW-----------------PNSV------TETFPDHNKVMEYLQAYAA 115 (523)
Q Consensus 79 --~~---~~~~~~~~---------------~~~~-----------------~~~~------~~~~~~~~~~~~yl~~~~~ 115 (523)
.. ....+.+. +++. +... .........+.+.+.+.++
T Consensus 344 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~ 423 (689)
T 3pvc_A 344 GIAFDHQWCGVSQLAFDDKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTHALMMLAQ 423 (689)
T ss_dssp TCCCCEECCCEEEECCSHHHHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHH
T ss_pred ccccccccCceEEeccCHHHHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHHHHHHHHH
Confidence 00 00000000 0110 0000 0111234577778888888
Q ss_pred HhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 116 HFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 116 ~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
+.|+ .|+++++|+++...+ ++|.|.+.++. .++.+|.||+|+|..+
T Consensus 424 ~~Gv--~i~~~t~V~~l~~~~----------------------~~v~V~t~~G~------~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 424 QNGM--TCHYQHELQRLKRID----------------------SQWQLTFGQSQ------AAKHHATVILATGHRL 469 (689)
T ss_dssp HTTC--EEEESCCEEEEEECS----------------------SSEEEEEC-CC------CCEEESEEEECCGGGT
T ss_pred hCCC--EEEeCCeEeEEEEeC----------------------CeEEEEeCCCc------EEEECCEEEECCCcch
Confidence 8888 899999999999865 45888776541 1488999999999984
No 140
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.83 E-value=1.8e-08 Score=103.84 Aligned_cols=40 Identities=28% Similarity=0.424 Sum_probs=37.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccc
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWS 70 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~ 70 (523)
+||+|||||++|++||..|++.|.+|+|+|+++.+||...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeec
Confidence 6999999999999999999999999999999999998765
No 141
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.82 E-value=2.8e-09 Score=101.76 Aligned_cols=43 Identities=37% Similarity=0.573 Sum_probs=40.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
|++||+||||||+||+||..|++.|++|+|||+++.+||.+..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~ 43 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSS 43 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccc
Confidence 6789999999999999999999999999999999999998764
No 142
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.79 E-value=4.5e-08 Score=104.63 Aligned_cols=137 Identities=19% Similarity=0.188 Sum_probs=87.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccc------------cCCcCc-------------
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKL------------QTPKSF------------- 84 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~------------~~~~~~------------- 84 (523)
.+||+|||+|++||++|..|++.|.+|+|+|+.+.+||.....-.++.. ..+..+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 4799999999999999999999999999999999888764331111100 000000
Q ss_pred -----------------eeeCCCCCC-----CC--CC------CCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEe
Q 009897 85 -----------------YQFSDFAWP-----NS--VT------ETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDR 134 (523)
Q Consensus 85 -----------------~~~~~~~~~-----~~--~~------~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~ 134 (523)
+.-.+.++. .. .. .....+..+.+.|.+.+++.++ .++++++|+++..
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv--~i~~~t~v~~l~~ 283 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGT--DIRLNSRVVRILE 283 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC--EEESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCC--eEEecCEEEEEEE
Confidence 000011111 00 00 0112366888999999999998 8999999999976
Q ss_pred CCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeeecC
Q 009897 135 LVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~s 191 (523)
++ ....+.|.+.+. +++..++.+|.||+|||.++
T Consensus 284 ~~--------------------~g~v~GV~~~~~---~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 284 DA--------------------SGKVTGVLVKGE---YTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp C----------------------CCEEEEEEEET---TTEEEEEECSEEEECCCCCT
T ss_pred CC--------------------CCeEEEEEEEeC---CCcEEEEEcCEEEEeCCCCc
Confidence 42 012234555531 12344689999999999874
No 143
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.79 E-value=5.9e-09 Score=111.00 Aligned_cols=172 Identities=19% Similarity=0.239 Sum_probs=101.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCC-CCCccccc-c---------------cCcccc-cCCcCceeeCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS-GIGGVWSQ-T---------------IESTKL-QTPKSFYQFSDF 90 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~-~~GG~w~~-~---------------~~~~~~-~~~~~~~~~~~~ 90 (523)
..+||+|||||++|++||..|++.|.+|+|+|+.. .+|+.+.. . .++... ........|...
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 45899999999999999999999999999999975 45554321 0 011000 000000111100
Q ss_pred CC---CCCC-CCCCCChhHHHHHHHHHHHHh-CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeE-EE
Q 009897 91 AW---PNSV-TETFPDHNKVMEYLQAYAAHF-NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWN-VT 164 (523)
Q Consensus 91 ~~---~~~~-~~~~~~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~ 164 (523)
.. +... ......+..+.+++.+.++++ ++ .+ ++.+|+.+.... +... |.
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV--~I-~~~~V~~L~~d~----------------------g~V~GV~ 154 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNI--DL-LQDTVIGVSANS----------------------GKFSSVT 154 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EECCEEEEEEET----------------------TEEEEEE
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCC--EE-EeeEEEEEEecC----------------------CEEEEEE
Confidence 00 0000 001234567888888888875 66 55 566898887653 3333 66
Q ss_pred EeecccCCcceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcCCCCHHHHHH
Q 009897 165 VQEARNVSSATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGFQKSAVDVAA 244 (523)
Q Consensus 165 ~~~~~~~~~~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~ 244 (523)
+.++. .+.+|.||+|||.++ +.+.++ |...+ .+.+++ |+.++.+++.
T Consensus 155 t~~G~-------~i~Ad~VVLATG~~s---~~~i~~---G~~~~-----------------~~g~~v---G~~~a~~la~ 201 (641)
T 3cp8_A 155 VRSGR-------AIQAKAAILACGTFL---NGLIHI---GMDHF-----------------PGGRST---AEPPVEGLTE 201 (641)
T ss_dssp ETTSC-------EEEEEEEEECCTTCB---TCEEEE---TTEEE-----------------ECSSST---TSCCBCSHHH
T ss_pred ECCCc-------EEEeCEEEECcCCCC---Ccccee---eeeee-----------------cccccc---CCchhhhhHH
Confidence 65554 799999999999763 322222 22211 011221 3677889998
Q ss_pred HHHHhcCCccCEEEEEe
Q 009897 245 EVANRNGVRYPCTLLFK 261 (523)
Q Consensus 245 ~l~~~~~~~~~Vt~~~r 261 (523)
.|...+.. |+.+..
T Consensus 202 ~L~~~G~k---v~~l~t 215 (641)
T 3cp8_A 202 SLASLGFS---FGRLKT 215 (641)
T ss_dssp HHHHTTCC---EEEEEE
T ss_pred HHHhCCce---EEeecC
Confidence 89887654 766643
No 144
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.77 E-value=2.6e-08 Score=106.21 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=35.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGV 68 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~ 68 (523)
..+||+|||||++|+++|..|+++|++|+|+|+.+..+|+
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~Gt 56 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGT 56 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSG
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCc
Confidence 3589999999999999999999999999999998655554
No 145
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.77 E-value=2.7e-08 Score=101.33 Aligned_cols=36 Identities=22% Similarity=0.406 Sum_probs=33.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGI 65 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~ 65 (523)
.+||+|||||++|+++|..|+++|.+|+|+|+....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 379999999999999999999999999999997654
No 146
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.75 E-value=4.5e-08 Score=102.95 Aligned_cols=63 Identities=14% Similarity=0.177 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCE
Q 009897 103 HNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDF 182 (523)
Q Consensus 103 ~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~ 182 (523)
...+...+.+.+.+.|. .+.++++|+++...+ +.|.|++.+.. +++..++.+|.
T Consensus 148 ~~~l~~~l~~~a~~~Gv--~i~~~~~V~~l~~~~----------------------~~~~V~~~d~~--~G~~~~i~A~~ 201 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGG--EVLTRTRATSARREN----------------------GLWIVEAEDID--TGKKYSWQARG 201 (501)
T ss_dssp HHHHHHHHHHHHHHTTC--EEECSEEEEEEEEET----------------------TEEEEEEEETT--TCCEEEEEESC
T ss_pred HHHHHHHHHHHHHHcCC--EEEcCcEEEEEEEeC----------------------CEEEEEEEECC--CCCEEEEECCE
Confidence 45677778888888888 899999999998753 45888876422 12334789999
Q ss_pred EEEeeeecC
Q 009897 183 VILCIGRYS 191 (523)
Q Consensus 183 vVlAtG~~s 191 (523)
||+|+|.++
T Consensus 202 VV~AtG~~s 210 (501)
T 2qcu_A 202 LVNATGPWV 210 (501)
T ss_dssp EEECCGGGH
T ss_pred EEECCChhH
Confidence 999999874
No 147
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.75 E-value=4.4e-08 Score=106.10 Aligned_cols=144 Identities=13% Similarity=0.153 Sum_probs=88.7
Q ss_pred CCcEEEECCChHHHHHHHHHHH-CCCceEEEccCCCCCccccc---------cc----------------CcccccC---
Q 009897 30 ERKIAIIGAGVSGLLACKYTLE-NGFKPIVFEARSGIGGVWSQ---------TI----------------ESTKLQT--- 80 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~-~g~~v~v~e~~~~~GG~w~~---------~~----------------~~~~~~~--- 80 (523)
.+||+||||||+||++|..|++ .|++|+|||+.+..+..... .. .......
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 111 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDP 111 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECT
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCC
Confidence 3799999999999999999999 99999999998765422110 00 0000000
Q ss_pred --CcCceeeCCCCCC-CC--C-CCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCC
Q 009897 81 --PKSFYQFSDFAWP-NS--V-TETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKP 154 (523)
Q Consensus 81 --~~~~~~~~~~~~~-~~--~-~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~ 154 (523)
.........++.. .. . .....++..+.++|.+.+++++..-.|+++++|++++.+. +.
T Consensus 112 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~--~~-------------- 175 (639)
T 2dkh_A 112 GQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDH--GA-------------- 175 (639)
T ss_dssp TSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECT--TC--------------
T ss_pred CCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECC--CC--------------
Confidence 0001100001100 00 0 1123467789999999999886422689999999998764 00
Q ss_pred CCCCCCeEEEEeecc-cCCcceeEEEeCEEEEeeeecC
Q 009897 155 FSSSGKWNVTVQEAR-NVSSATEAYQVDFVILCIGRYS 191 (523)
Q Consensus 155 ~~~~~~~~v~~~~~~-~~~~~~~~~~~d~vVlAtG~~s 191 (523)
....+.|++.+.. ..+++.+++.+|+||.|+|.+|
T Consensus 176 --~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 176 --ADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp --SSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred --CcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 0125778776410 0012234799999999999986
No 148
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.74 E-value=9.3e-08 Score=100.81 Aligned_cols=40 Identities=30% Similarity=0.523 Sum_probs=37.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGV 68 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~ 68 (523)
.++||+|||||++||+||..|++.|.+|+|+|+.+.+||.
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~ 79 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGA 79 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 3489999999999999999999999999999999988764
No 149
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.72 E-value=2.2e-08 Score=102.93 Aligned_cols=41 Identities=37% Similarity=0.665 Sum_probs=37.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
+||+|||||++||++|..|++.|.+|+|+|+++.+||....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~ 41 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTN 41 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEE
Confidence 48999999999999999999999999999999999986543
No 150
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.72 E-value=1.1e-08 Score=106.39 Aligned_cols=41 Identities=29% Similarity=0.502 Sum_probs=37.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC------CceEEEccCCCCCccc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENG------FKPIVFEARSGIGGVW 69 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g------~~v~v~e~~~~~GG~w 69 (523)
|.+||+|||||++||+||..|.+.| ++|+|+|+++.+||..
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceE
Confidence 3579999999999999999999999 9999999999998853
No 151
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.67 E-value=3.9e-08 Score=101.03 Aligned_cols=40 Identities=35% Similarity=0.529 Sum_probs=37.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccc
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWS 70 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~ 70 (523)
+||+|||||++||+||..|+++|.+|+|+|+++.+||...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFT 40 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCcee
Confidence 4899999999999999999999999999999999988654
No 152
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.67 E-value=4e-08 Score=96.90 Aligned_cols=105 Identities=18% Similarity=0.222 Sum_probs=63.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC--CCceEEEccCCCCCc-cccc--ccCcccccCCc-CceeeCCCCCCCC-CCCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSGIGG-VWSQ--TIESTKLQTPK-SFYQFSDFAWPNS-VTETFP 101 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~~GG-~w~~--~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~ 101 (523)
+.+||+|||||++|+++|..|+++ |++|+|+|+...+|| .|.. .+....+..+. ..+.-.+.++... ......
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~ 157 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVK 157 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEES
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEe
Confidence 348999999999999999999997 999999999988774 4532 11111111000 0000001111110 000011
Q ss_pred ChhHHHHHHHHHHHHh-CCCCceEeccEEEEEEeC
Q 009897 102 DHNKVMEYLQAYAAHF-NLFPSIKFDTKVTSIDRL 135 (523)
Q Consensus 102 ~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~ 135 (523)
...++.+.|.+.+... ++ .++++++|+++...
T Consensus 158 ~~~d~~~~L~~~a~~~~gV--~i~~~~~V~dLi~~ 190 (344)
T 3jsk_A 158 HAALFTSTVLSKVLQRPNV--KLFNATTVEDLITR 190 (344)
T ss_dssp CHHHHHHHHHHHHHTCTTE--EEEETEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhCCCC--EEEeCCEEEEEEec
Confidence 2455666676666663 66 78889999988764
No 153
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.66 E-value=3.6e-08 Score=92.71 Aligned_cols=112 Identities=13% Similarity=0.058 Sum_probs=64.3
Q ss_pred chhhhccC-CCEEEEecCceEEec--C---cEEEcCCceeeeccEEEEecCCCCCcccccc-----------ccchhhhh
Q 009897 350 NFYDRVQG-GGLSLMKSRSFTFCK--N---GLVIDGETTPLVTDIVIFATGYKSDEKLKNI-----------FKSTYFQK 412 (523)
Q Consensus 350 ~~~~~~~~-g~v~v~~~~i~~~~~--~---~v~l~dG~~~~~~D~VI~ATG~~~~~~l~~~-----------~~~~~l~~ 412 (523)
.+.+.+++ ++++++...++++.. + +|++.+|++ +++|.||+|||.........- .+...+..
T Consensus 73 ~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~-i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~ 151 (232)
T 2cul_A 73 RAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPP-ARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLE 151 (232)
T ss_dssp HHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCC-EECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHH
T ss_pred HHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCE-EECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCH
Confidence 34455555 378887666776653 2 367788887 999999999999654321000 00000000
Q ss_pred hh-----------------cCCCc------cc------ccccccCCCCCeEEecccCCCCchhhHHHHHHHHHHHHcCC
Q 009897 413 QI-----------------TGSSA------PL------YREGIHPQIPQLAILGYADSPSILRTTEMRSKCLAHFLAGN 462 (523)
Q Consensus 413 ~~-----------------~~~~~------~l------y~~~~~~~~p~l~~iG~~~~~~~~~~ae~Qa~~~a~~l~g~ 462 (523)
.+ .+.|. .+ ...+-.+++|+||++|.+.....+..+..|++.+|..|...
T Consensus 152 ~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a~~g~~~~~~~~g~~~a~~i~~~ 230 (232)
T 2cul_A 152 DLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCVREGDYARMSEEGKRLAEHLLHE 230 (232)
T ss_dssp HHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecccCccHHHHHHHHHHHHHHHHhh
Confidence 00 00100 00 00111247899999998873335677889999999987543
No 154
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.65 E-value=1.1e-07 Score=106.21 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=33.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~~~ 64 (523)
.+||+|||||++|+++|++|+++|. +|+|+|+...
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 4799999999999999999999998 9999999875
No 155
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.65 E-value=8.4e-08 Score=100.02 Aligned_cols=36 Identities=36% Similarity=0.407 Sum_probs=32.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcc
Q 009897 32 KIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGV 68 (523)
Q Consensus 32 ~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~ 68 (523)
||+|||||++|+++|..|++.|.+|+|+|+. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCch
Confidence 7999999999999999999999999999998 55554
No 156
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.63 E-value=1e-07 Score=103.50 Aligned_cols=105 Identities=15% Similarity=0.170 Sum_probs=65.6
Q ss_pred CCcEEEECCChHHHHHHHHHHH-----CCCceEEEccCCCCCc------ccccc-------------------cCccccc
Q 009897 30 ERKIAIIGAGVSGLLACKYTLE-----NGFKPIVFEARSGIGG------VWSQT-------------------IESTKLQ 79 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~-----~g~~v~v~e~~~~~GG------~w~~~-------------------~~~~~~~ 79 (523)
.+||+||||||+||++|..|++ .|++|+|||+.+.... .+... ...+...
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 4799999999999999999999 9999999998765321 11100 0000000
Q ss_pred CCc---Cce---eeCCCCCCC-CCCCCCCChhHHHHHHHHHHHHhC---CCCceEeccEEEEEEeCC
Q 009897 80 TPK---SFY---QFSDFAWPN-SVTETFPDHNKVMEYLQAYAAHFN---LFPSIKFDTKVTSIDRLV 136 (523)
Q Consensus 80 ~~~---~~~---~~~~~~~~~-~~~~~~~~~~~~~~yl~~~~~~~~---l~~~i~~~~~V~~v~~~~ 136 (523)
.+. ... .+.+..... .......++..+.++|.+.+++++ + .++++++|++++.+.
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v--~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRI--KVERPLIPEKMEIDS 152 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSS--CEECSEEEEEEEECG
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCce--EEEeCCEEEEEEecC
Confidence 000 000 011100000 001122567888999999999887 6 799999999998753
No 157
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.63 E-value=5.6e-08 Score=103.21 Aligned_cols=59 Identities=24% Similarity=0.366 Sum_probs=46.1
Q ss_pred ChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCC-CeEEEEeecccCCcceeEEEe
Q 009897 102 DHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSG-KWNVTVQEARNVSSATEAYQV 180 (523)
Q Consensus 102 ~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~ 180 (523)
.+..+.++|.+.+++.|+ .++++ +|+++.... ++ .+.|++.++. ++.+
T Consensus 163 ~~~~l~~~L~~~a~~~gv--~~~~~-~v~~i~~~~---------------------~g~~~~v~~~~g~-------~i~a 211 (538)
T 2aqj_A 163 DAHLVADFLKRWAVERGV--NRVVD-EVVDVRLNN---------------------RGYISNLLTKEGR-------TLEA 211 (538)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEEEC-CEEEEEECT---------------------TSCEEEEEETTSC-------EECC
T ss_pred eHHHHHHHHHHHHHHCCC--EEEEe-eEeEEEEcC---------------------CCcEEEEEECCCc-------EEEe
Confidence 457888999999998888 78888 899998754 12 2456665543 7899
Q ss_pred CEEEEeeeecC
Q 009897 181 DFVILCIGRYS 191 (523)
Q Consensus 181 d~vVlAtG~~s 191 (523)
|.||+|+|..|
T Consensus 212 d~vV~A~G~~s 222 (538)
T 2aqj_A 212 DLFIDCSGMRG 222 (538)
T ss_dssp SEEEECCGGGC
T ss_pred CEEEECCCCch
Confidence 99999999885
No 158
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.63 E-value=9.2e-09 Score=104.33 Aligned_cols=101 Identities=14% Similarity=0.068 Sum_probs=62.3
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCceEEEccCCCC---CcccccccC--------ccc----c---cCCcCceee--C
Q 009897 31 RKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSGI---GGVWSQTIE--------STK----L---QTPKSFYQF--S 88 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~~---GG~w~~~~~--------~~~----~---~~~~~~~~~--~ 88 (523)
+||+|||||++|+++|..|++. |++|+|+|+.+.+ |........ ++. + ..+...+.+ .
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 4899999999999999999998 9999999998766 322111000 000 0 000000111 0
Q ss_pred CCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEE
Q 009897 89 DFAWPNSVTE--TFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSID 133 (523)
Q Consensus 89 ~~~~~~~~~~--~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~ 133 (523)
+..+...... ....+.++.++|.+.+++.++ .++++++|++++
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv--~i~~~~~v~~i~ 125 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGI--AIRFESPLLEHG 125 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTC--EEETTCCCCSGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCC--EEEeCCEeccch
Confidence 1001000001 124678899999999998888 789998886543
No 159
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.62 E-value=7.3e-08 Score=94.52 Aligned_cols=103 Identities=19% Similarity=0.280 Sum_probs=63.6
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCceEEEccCCCCC-ccccc--ccCcccccCCc-CceeeCCCCCCCC-CCCCCCCh
Q 009897 31 RKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSGIG-GVWSQ--TIESTKLQTPK-SFYQFSDFAWPNS-VTETFPDH 103 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~~G-G~w~~--~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~ 103 (523)
+||+|||||++|+++|..|++. |.+|+|+|+.+.+| |.|.. .+....+.... ..+.-.+.++... ........
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 5999999999999999999998 99999999998887 45542 11111111000 0000011111110 00001134
Q ss_pred hHHHHHHHHHHHHh-CCCCceEeccEEEEEEeC
Q 009897 104 NKVMEYLQAYAAHF-NLFPSIKFDTKVTSIDRL 135 (523)
Q Consensus 104 ~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~ 135 (523)
.++...|.+.+... ++ .+..+++|+++...
T Consensus 146 ~~~~~~L~~~a~~~~GV--~i~~~~~V~~Ll~~ 176 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNV--KLFNATCVEDLVTR 176 (326)
T ss_dssp HHHHHHHHHHHHTSTTE--EEETTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCc--EEEecceeeeeeec
Confidence 56667777766664 66 77889999999875
No 160
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.60 E-value=2.6e-07 Score=98.90 Aligned_cols=38 Identities=21% Similarity=0.186 Sum_probs=34.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIG 66 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~G 66 (523)
.++||+|||||++|++||..|++.|.+|+|+|+....+
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~ 43 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTR 43 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 34799999999999999999999999999999987654
No 161
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.60 E-value=4.3e-08 Score=100.27 Aligned_cols=35 Identities=26% Similarity=0.288 Sum_probs=32.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCceEEEccCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~ 64 (523)
.+||+|||||++|+++|..|+++ |++|+|||+...
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 37999999999999999999999 999999999753
No 162
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.59 E-value=1.7e-07 Score=99.21 Aligned_cols=60 Identities=17% Similarity=0.175 Sum_probs=45.8
Q ss_pred CChhHHHHHHHHHHHH-hCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCC-CeEEEEeecccCCcceeEE
Q 009897 101 PDHNKVMEYLQAYAAH-FNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSG-KWNVTVQEARNVSSATEAY 178 (523)
Q Consensus 101 ~~~~~~~~yl~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~ 178 (523)
..+..+.++|.+.+++ .++ .++++ +|+++.... ++ ...|++.++. ++
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv--~i~~~-~v~~i~~~~---------------------~g~~~~v~~~~g~-------~i 220 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGV--THIRD-HVSQIINNQ---------------------HGDIEKLITKQNG-------EI 220 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCC--EEEEC-CEEEEEECT---------------------TSCEEEEEESSSC-------EE
T ss_pred EcHHHHHHHHHHHHHhcCCC--EEEEe-EEEEEEecC---------------------CCcEEEEEECCCC-------EE
Confidence 3567888999999998 888 78888 699998753 12 2345555443 69
Q ss_pred EeCEEEEeeeecC
Q 009897 179 QVDFVILCIGRYS 191 (523)
Q Consensus 179 ~~d~vVlAtG~~s 191 (523)
.+|.||.|+|..|
T Consensus 221 ~ad~vV~AdG~~S 233 (526)
T 2pyx_A 221 SGQLFIDCTGAKS 233 (526)
T ss_dssp ECSEEEECSGGGC
T ss_pred EcCEEEECCCcch
Confidence 9999999999885
No 163
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.59 E-value=6.9e-08 Score=101.85 Aligned_cols=60 Identities=22% Similarity=0.281 Sum_probs=47.2
Q ss_pred CChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCC-CeEEEEeecccCCcceeEEE
Q 009897 101 PDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSG-KWNVTVQEARNVSSATEAYQ 179 (523)
Q Consensus 101 ~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~ 179 (523)
..+..+.++|.+.+++.|+ .++++ +|+++.... ++ .+.|++.++. ++.
T Consensus 170 ~~~~~l~~~L~~~a~~~gv--~~~~~-~v~~i~~~~---------------------~~~~~~v~~~~g~-------~~~ 218 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGV--RHVVD-DVQHVGQDE---------------------RGWISGVHTKQHG-------EIS 218 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTC--EEEEC-CEEEEEECT---------------------TSCEEEEEESSSC-------EEE
T ss_pred EcHHHHHHHHHHHHHHCCC--EEEEC-eEeEEEEcC---------------------CCCEEEEEECCCC-------EEE
Confidence 3567888999999998888 88899 999998753 12 2556665553 799
Q ss_pred eCEEEEeeeecC
Q 009897 180 VDFVILCIGRYS 191 (523)
Q Consensus 180 ~d~vVlAtG~~s 191 (523)
+|.||.|+|..|
T Consensus 219 ad~vV~A~G~~S 230 (511)
T 2weu_A 219 GDLFVDCTGFRG 230 (511)
T ss_dssp CSEEEECCGGGC
T ss_pred cCEEEECCCcch
Confidence 999999999885
No 164
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.59 E-value=2.4e-07 Score=96.16 Aligned_cols=97 Identities=22% Similarity=0.257 Sum_probs=78.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||||++|+.+|..|++.|.+|+++|+.+.+. + ....++.+.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l--------------------------~-------~~~~~~~~~ 213 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL--------------------------P-------TMDLEVSRA 213 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------T-------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc--------------------------c-------ccCHHHHHH
Confidence 4789999999999999999999999999999976441 0 012567788
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|++++... +.+.|++.++. ++.+|.||+|+|.
T Consensus 214 l~~~l~~~Gv--~i~~~~~V~~i~~~~----------------------~~v~v~~~~g~-------~i~~D~vv~A~G~ 262 (455)
T 2yqu_A 214 AERVFKKQGL--TIRTGVRVTAVVPEA----------------------KGARVELEGGE-------VLEADRVLVAVGR 262 (455)
T ss_dssp HHHHHHHHTC--EEECSCCEEEEEEET----------------------TEEEEEETTSC-------EEEESEEEECSCE
T ss_pred HHHHHHHCCC--EEEECCEEEEEEEeC----------------------CEEEEEECCCe-------EEEcCEEEECcCC
Confidence 8888888898 899999999998754 34666665543 7999999999997
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 263 ~ 263 (455)
T 2yqu_A 263 R 263 (455)
T ss_dssp E
T ss_pred C
Confidence 6
No 165
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.58 E-value=1.4e-07 Score=97.66 Aligned_cols=47 Identities=23% Similarity=0.150 Sum_probs=34.0
Q ss_pred ceeeccCCCCCCCcEEEECCChHHHHHHHHHHHCC-CceEEEccCCCC
Q 009897 19 CFTVFSSGPKMERKIAIIGAGVSGLLACKYTLENG-FKPIVFEARSGI 65 (523)
Q Consensus 19 ~~~~~~~~~~~~~~v~IIGaG~aGl~aA~~l~~~g-~~v~v~e~~~~~ 65 (523)
|...+...+|..+||+|||||++|+++|..|+++| .+|+|+|+...+
T Consensus 12 ~~~~~~~~~m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 12 SGLVPRGSHMPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAP 59 (448)
T ss_dssp ---------CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSST
T ss_pred cccccCcccCCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCC
Confidence 33344444556689999999999999999999999 999999994443
No 166
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.58 E-value=2.8e-07 Score=98.05 Aligned_cols=60 Identities=22% Similarity=0.352 Sum_probs=47.3
Q ss_pred CChhHHHHHHHHHHHHh-CCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCC-CeEEEEeecccCCcceeEE
Q 009897 101 PDHNKVMEYLQAYAAHF-NLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSG-KWNVTVQEARNVSSATEAY 178 (523)
Q Consensus 101 ~~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~ 178 (523)
..+..+.++|.+.+++. |+ .++++ +|+++.... ++ .+.|++.++. ++
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv--~i~~~-~V~~i~~~~---------------------~g~~~~v~~~~G~-------~i 239 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGV--RHVED-RVEHVQRDA---------------------NGNIESVRTATGR-------VF 239 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCC--EEEEC-CEEEEEECT---------------------TSCEEEEEETTSC-------EE
T ss_pred EcHHHHHHHHHHHHHhcCCc--EEEEC-eEeEEEEcC---------------------CCCEEEEEECCCC-------EE
Confidence 46678999999999998 88 89999 999998753 12 2456655543 79
Q ss_pred EeCEEEEeeeecC
Q 009897 179 QVDFVILCIGRYS 191 (523)
Q Consensus 179 ~~d~vVlAtG~~s 191 (523)
.+|.||+|+|..|
T Consensus 240 ~ad~vI~A~G~~S 252 (550)
T 2e4g_A 240 DADLFVDCSGFRG 252 (550)
T ss_dssp ECSEEEECCGGGC
T ss_pred ECCEEEECCCCch
Confidence 9999999999875
No 167
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.56 E-value=3.3e-07 Score=92.94 Aligned_cols=98 Identities=14% Similarity=0.226 Sum_probs=79.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++|+.+.+.. .+ ...++.++
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------------------------~~-~~~~~~~~ 192 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP-------------------------------GL-LHPAAAKA 192 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------TT-SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh-------------------------------cc-cCHHHHHH
Confidence 47899999999999999999999999999999764410 00 12567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... +.+.|++.++. ++.+|.||+|+|.
T Consensus 193 l~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~g~-------~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 193 VQAGLEGLGV--RFHLGPVLASLKKAG----------------------EGLEAHLSDGE-------VIPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHHTTTC--EEEESCCEEEEEEET----------------------TEEEEEETTSC-------EEEESEEEECSCE
T ss_pred HHHHHHHcCC--EEEeCCEEEEEEecC----------------------CEEEEEECCCC-------EEECCEEEECcCC
Confidence 8888888888 899999999998754 34677776654 7999999999997
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 242 ~ 242 (384)
T 2v3a_A 242 R 242 (384)
T ss_dssp E
T ss_pred C
Confidence 6
No 168
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.55 E-value=2.9e-07 Score=98.76 Aligned_cols=37 Identities=24% Similarity=0.286 Sum_probs=33.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--CceEEEccCCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENG--FKPIVFEARSGIG 66 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g--~~v~v~e~~~~~G 66 (523)
.+||+|||||++|+++|..|++.| .+|+|+|+....+
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~ 43 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMR 43 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCC
Confidence 479999999999999999999999 9999999976543
No 169
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.54 E-value=3e-07 Score=98.65 Aligned_cols=37 Identities=27% Similarity=0.261 Sum_probs=33.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIG 66 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~G 66 (523)
++||+|||||++||+||..|++.|.+|+|+|+....+
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~ 54 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTR 54 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 4799999999999999999999999999999976544
No 170
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.54 E-value=3.7e-07 Score=94.59 Aligned_cols=102 Identities=20% Similarity=0.237 Sum_probs=81.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||||+.|+.+|..|.+.|.+|+++|+.+.+. .. -..++.++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 213 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-------------------------------PS--FDPMISET 213 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-------------------------------hh--hhHHHHHH
Confidence 4789999999999999999999999999999976441 10 12467788
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... ++...|++.+++ ++.+|.||+|+|.
T Consensus 214 l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~g~-------~i~~D~vv~a~G~ 263 (450)
T 1ges_A 214 LVEVMNAEGP--QLHTNAIPKAVVKNT---------------------DGSLTLELEDGR-------SETVDCLIWAIGR 263 (450)
T ss_dssp HHHHHHHHSC--EEECSCCEEEEEECT---------------------TSCEEEEETTSC-------EEEESEEEECSCE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEEEeC---------------------CcEEEEEECCCc-------EEEcCEEEECCCC
Confidence 8888888899 899999999998753 234677776654 7999999999996
Q ss_pred cCCCCCCC
Q 009897 190 YSDLPNTP 197 (523)
Q Consensus 190 ~s~~p~~p 197 (523)
. |+..
T Consensus 264 ~---p~~~ 268 (450)
T 1ges_A 264 E---PAND 268 (450)
T ss_dssp E---ESCT
T ss_pred C---cCCC
Confidence 5 5553
No 171
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.53 E-value=1.2e-07 Score=95.17 Aligned_cols=93 Identities=19% Similarity=0.282 Sum_probs=59.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccC-CCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR-SGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVM 107 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~-~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (523)
..+||+|||||++||+||..|.+.|++|+|+|++ +.+||.|.... ... ..+.. +....+.+... ...+ ....
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~-~~~-~~~~~-~~~~~~~~e~G-~~~~---~~~~ 115 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFH-AKK-GEPSP-FADPAQYAEAG-AMRL---PSFH 115 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEEC-CCT-TSCCS-SSSTTCCEESS-CCCE---ETTC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeec-ccc-ccccc-ccCCCcEEecC-ceee---cchH
Confidence 3489999999999999999999999999999999 99999887522 100 00000 00000111000 0011 1235
Q ss_pred HHHHHHHHHhCCCCceEeccE
Q 009897 108 EYLQAYAAHFNLFPSIKFDTK 128 (523)
Q Consensus 108 ~yl~~~~~~~~l~~~i~~~~~ 128 (523)
.++.++++++++...+.++..
T Consensus 116 ~~~~~~~~~lGl~~~~~~~~~ 136 (376)
T 2e1m_A 116 PLTLALIDKLGLKRRLFFNVD 136 (376)
T ss_dssp HHHHHHHHHTTCCEEEECSSC
T ss_pred HHHHHHHHHcCCCcceeeccc
Confidence 678888999998655555543
No 172
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.53 E-value=1.4e-06 Score=91.56 Aligned_cols=102 Identities=23% Similarity=0.371 Sum_probs=81.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~ 222 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-------------------------------RK--FDESVINV 222 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC-------------------------------cc--cchhhHHH
Confidence 4789999999999999999999999999999976541 10 12567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeE-EEeCEEEEeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEA-YQVDFVILCIG 188 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~d~vVlAtG 188 (523)
+.+..++.++ .++++++|.+++... ++...|++.+++ + +.+|.||+|+|
T Consensus 223 l~~~l~~~gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~g~-------~~~~~D~vi~a~G 272 (500)
T 1onf_A 223 LENDMKKNNI--NIVTFADVVEIKKVS---------------------DKNLSIHLSDGR-------IYEHFDHVIYCVG 272 (500)
T ss_dssp HHHHHHHTTC--EEECSCCEEEEEESS---------------------TTCEEEEETTSC-------EEEEESEEEECCC
T ss_pred HHHHHHhCCC--EEEECCEEEEEEEcC---------------------CceEEEEECCCc-------EEEECCEEEECCC
Confidence 8888889999 899999999998753 234677776554 5 89999999999
Q ss_pred ecCCCCCCC
Q 009897 189 RYSDLPNTP 197 (523)
Q Consensus 189 ~~s~~p~~p 197 (523)
.. |+..
T Consensus 273 ~~---p~~~ 278 (500)
T 1onf_A 273 RS---PDTE 278 (500)
T ss_dssp BC---CTTT
T ss_pred CC---cCCC
Confidence 54 6653
No 173
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.52 E-value=2.1e-07 Score=97.15 Aligned_cols=42 Identities=24% Similarity=0.512 Sum_probs=37.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWS 70 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~ 70 (523)
..+||+|||||++||+||..|++.|++|+|+|+++.+||...
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~ 56 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVG 56 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceee
Confidence 348999999999999999999999999999999999998543
No 174
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.52 E-value=4.9e-07 Score=94.44 Aligned_cols=108 Identities=24% Similarity=0.377 Sum_probs=81.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||||+.|+.+|..|++.|.+|+++|+.+.+.. .-..++.++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 229 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA---------------------------------SMDGEVAKA 229 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS---------------------------------SSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc---------------------------------ccCHHHHHH
Confidence 47999999999999999999999999999999765421 012577888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... ..+.+.|++.+.. +++..++.+|.||+|+|.
T Consensus 230 l~~~l~~~gv--~i~~~~~v~~i~~~~--------------------~~~~~~v~~~~~~--~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 230 TQKFLKKQGL--DFKLSTKVISAKRND--------------------DKNVVEIVVEDTK--TNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp HHHHHHHTTC--EEECSEEEEEEEEET--------------------TTTEEEEEEEETT--TTEEEEEEESEEEECSCE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEEEec--------------------CCCeEEEEEEEcC--CCCceEEECCEEEECCCC
Confidence 8888899999 899999999998721 0134667665311 011237899999999996
Q ss_pred cCCCCCCC
Q 009897 190 YSDLPNTP 197 (523)
Q Consensus 190 ~s~~p~~p 197 (523)
. |+..
T Consensus 286 ~---p~~~ 290 (478)
T 1v59_A 286 R---PYIA 290 (478)
T ss_dssp E---ECCT
T ss_pred C---cCCC
Confidence 5 5554
No 175
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.50 E-value=5.7e-07 Score=93.36 Aligned_cols=104 Identities=17% Similarity=0.253 Sum_probs=80.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|++.|.+|+++|+.+.+. .. ...++.++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 216 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL-------------------------------SG--FEKQMAAI 216 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4899999999999999999999999999999976541 00 12567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... +...|++.... +..++.+|.||+|+|.
T Consensus 217 l~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~g----~~~~~~~D~vv~a~G~ 268 (455)
T 1ebd_A 217 IKKRLKKKGV--EVVTNALAKGAEERE----------------------DGVTVTYEANG----ETKTIDADYVLVTVGR 268 (455)
T ss_dssp HHHHHHHTTC--EEEESEEEEEEEEET----------------------TEEEEEEEETT----EEEEEEESEEEECSCE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEEEeC----------------------CeEEEEEEeCC----ceeEEEcCEEEECcCC
Confidence 8888888998 899999999998753 34556654210 1127899999999996
Q ss_pred cCCCCCCC
Q 009897 190 YSDLPNTP 197 (523)
Q Consensus 190 ~s~~p~~p 197 (523)
. |+.+
T Consensus 269 ~---p~~~ 273 (455)
T 1ebd_A 269 R---PNTD 273 (455)
T ss_dssp E---ESCS
T ss_pred C---cccC
Confidence 5 5543
No 176
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.50 E-value=2e-07 Score=98.85 Aligned_cols=38 Identities=24% Similarity=0.315 Sum_probs=34.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGG 67 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG 67 (523)
.++||+|||||++||++|..|++ |.+|+|+|+....+|
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 35899999999999999999999 999999999887654
No 177
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.49 E-value=6.1e-07 Score=93.34 Aligned_cols=106 Identities=20% Similarity=0.272 Sum_probs=81.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+.+. . ...+++.++
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 215 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL-------------------------------P--QGDPETAAL 215 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4789999999999999999999999999999976541 0 012577888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... +...|++.+.. +++..++.+|.||+|+|.
T Consensus 216 l~~~l~~~gV--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~~--~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 216 LRRALEKEGI--RVRTKTKAVGYEKKK----------------------DGLHVRLEPAE--GGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp HHHHHHHTTC--EEECSEEEEEEEEET----------------------TEEEEEEEETT--CCSCEEEEESEEEECSCE
T ss_pred HHHHHHhcCC--EEEcCCEEEEEEEeC----------------------CEEEEEEeecC--CCceeEEEcCEEEECCCc
Confidence 8888888998 899999999998754 34667665210 012236899999999996
Q ss_pred cCCCCCCC
Q 009897 190 YSDLPNTP 197 (523)
Q Consensus 190 ~s~~p~~p 197 (523)
. |+.+
T Consensus 270 ~---p~~~ 274 (464)
T 2eq6_A 270 K---PRTE 274 (464)
T ss_dssp E---ESCT
T ss_pred c---cCCC
Confidence 5 5554
No 178
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.48 E-value=8.5e-07 Score=95.88 Aligned_cols=36 Identities=28% Similarity=0.343 Sum_probs=33.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGI 65 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~ 65 (523)
++||+|||||++||+||.+|++.|.+|+|+|+....
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 479999999999999999999999999999998754
No 179
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.47 E-value=1e-06 Score=93.95 Aligned_cols=38 Identities=26% Similarity=0.371 Sum_probs=34.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCc
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGG 67 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG 67 (523)
.+||+|||||++|+++|..|+++|++|+|+|+.+..+|
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 48999999999999999999999999999999764444
No 180
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.47 E-value=3.9e-07 Score=94.74 Aligned_cols=175 Identities=15% Similarity=0.066 Sum_probs=89.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCC-------CC--CC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPN-------SV--TE 98 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~ 98 (523)
.++|+|||+|.+|+.+|..|.+. +.+|+++++++.+-..-...+ ......|...-.|..++... .. ..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~-~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~ 305 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPF-VNEVFAPKFTDLIYSREHAERERLLREYHNTNY 305 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHH-HHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCcc-chhccChhHHHHHhcCCHHHHHHHHHHhhccCC
Confidence 47899999999999999999998 889999999765411000000 00000000000000000000 00 00
Q ss_pred CCCChhHHHHHH-----HHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCc
Q 009897 99 TFPDHNKVMEYL-----QAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSS 173 (523)
Q Consensus 99 ~~~~~~~~~~yl-----~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 173 (523)
.-...+.+.+.. +.+....++ .++++++|++++... +.|.|++.+.. ++
T Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~v--~i~~~~~v~~v~~~~----------------------~~~~v~~~~~~--~g 359 (463)
T 3s5w_A 306 SVVDTDLIERIYGVFYRQKVSGIPRH--AFRCMTTVERATATA----------------------QGIELALRDAG--SG 359 (463)
T ss_dssp SCBCHHHHHHHHHHHHHHHHHCCCCS--EEETTEEEEEEEEET----------------------TEEEEEEEETT--TC
T ss_pred CcCCHHHHHHHHHHHHHHHhcCCCCe--EEEeCCEEEEEEecC----------------------CEEEEEEEEcC--CC
Confidence 001111111111 111111355 788999999998754 56889887543 23
Q ss_pred ceeEEEeCEEEEeeeecCCCCCCCCCCCCCCCCCCCccEEecCCCCchhhhcCCCEEEEEcC
Q 009897 174 ATEAYQVDFVILCIGRYSDLPNTPDFPMNKGPEVFDGKVLHSMNDDLAAELINGKRVTVIGF 235 (523)
Q Consensus 174 ~~~~~~~d~vVlAtG~~s~~p~~p~~p~~~g~~~~~g~~~h~~~~~~~~~~~~~k~V~VvG~ 235 (523)
+.+++.+|.||+|||..+ .|..+-+. ++....|.+....++..........+|-++|.
T Consensus 360 ~~~~~~~D~Vv~AtG~~p-~~~~~~l~---~l~~~~g~i~v~~~~~~~~~~~~~~~Ifa~G~ 417 (463)
T 3s5w_A 360 ELSVETYDAVILATGYER-QLHRQLLE---PLAEYLGDHEIGRDYRLQTDERCKVAIYAQGF 417 (463)
T ss_dssp CEEEEEESEEEECCCEEC-CC-CTTTG---GGGGGBC--CCCTTSBCCBCTTBCSEEEESSC
T ss_pred CeEEEECCEEEEeeCCCC-CCccchhH---HHHHHhCCcccCcccccccCCCCCCeEEEcCC
Confidence 445699999999999762 21133333 33222244555555442211112457888885
No 181
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.46 E-value=7.5e-08 Score=101.45 Aligned_cols=46 Identities=28% Similarity=0.447 Sum_probs=41.2
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHH-CCCceEEEccCCCCCcccc
Q 009897 25 SGPKMERKIAIIGAGVSGLLACKYTLE-NGFKPIVFEARSGIGGVWS 70 (523)
Q Consensus 25 ~~~~~~~~v~IIGaG~aGl~aA~~l~~-~g~~v~v~e~~~~~GG~w~ 70 (523)
+.|.|++||+|||||++||+||+.|++ .|++|+|+|+++.+||...
T Consensus 5 s~p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 5 THPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp -CCSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGC
T ss_pred CCCCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCee
Confidence 456678999999999999999999987 5999999999999999765
No 182
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.46 E-value=4.6e-07 Score=93.80 Aligned_cols=103 Identities=21% Similarity=0.283 Sum_probs=79.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|++|+.+|..|++.|.+|+++|+.+.+.. .+ ...++.++
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~-~~~~~~~~ 196 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG-------------------------------VY-LDKEFTDV 196 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------TT-CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc-------------------------------cc-CCHHHHHH
Confidence 47999999999999999999999999999999764411 00 12577888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... ..+.|.+ ++. ++.+|.||+|+|.
T Consensus 197 l~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~v~~v~~-~~~-------~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 197 LTEEMEANNI--TIATGETVERYEGDG----------------------RVQKVVT-DKN-------AYDADLVVVAVGV 244 (447)
T ss_dssp HHHHHHTTTE--EEEESCCEEEEECSS----------------------BCCEEEE-SSC-------EEECSEEEECSCE
T ss_pred HHHHHHhCCC--EEEcCCEEEEEEccC----------------------cEEEEEE-CCC-------EEECCEEEECcCC
Confidence 8888888888 899999999998642 2234554 333 7899999999996
Q ss_pred cCCCCCCCCC
Q 009897 190 YSDLPNTPDF 199 (523)
Q Consensus 190 ~s~~p~~p~~ 199 (523)
. |+.+.+
T Consensus 245 ~---p~~~~~ 251 (447)
T 1nhp_A 245 R---PNTAWL 251 (447)
T ss_dssp E---ESCGGG
T ss_pred C---CChHHH
Confidence 5 555433
No 183
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.45 E-value=9.5e-07 Score=90.49 Aligned_cols=102 Identities=21% Similarity=0.253 Sum_probs=81.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. . .....++.++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l-------------------------------~-~~~~~~~~~~ 199 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL-------------------------------A-RVAGEALSEF 199 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-------------------------------T-TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh-------------------------------h-hhcCHHHHHH
Confidence 5789999999999999999999999999999976441 0 0123678889
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.|+ .++++++|.++.... .....|++.+++ ++.+|.||+|+|.
T Consensus 200 l~~~l~~~GV--~i~~~~~v~~i~~~~---------------------~~v~~v~l~dG~-------~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 200 YQAEHRAHGV--DLRTGAAMDCIEGDG---------------------TKVTGVRMQDGS-------VIPADIVIVGIGI 249 (415)
T ss_dssp HHHHHHHTTC--EEEETCCEEEEEESS---------------------SBEEEEEESSSC-------EEECSEEEECSCC
T ss_pred HHHHHHhCCC--EEEECCEEEEEEecC---------------------CcEEEEEeCCCC-------EEEcCEEEECCCC
Confidence 9999999999 899999999998753 122357777665 8999999999995
Q ss_pred cCCCCCC
Q 009897 190 YSDLPNT 196 (523)
Q Consensus 190 ~s~~p~~ 196 (523)
. |+.
T Consensus 250 ~---p~~ 253 (415)
T 3lxd_A 250 V---PCV 253 (415)
T ss_dssp E---ESC
T ss_pred c---cCh
Confidence 4 554
No 184
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.43 E-value=9.1e-07 Score=97.24 Aligned_cols=39 Identities=41% Similarity=0.639 Sum_probs=36.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGG 67 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG 67 (523)
..+||+|||||++|+++|..|++.|++|+|+|+.+.+||
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 348999999999999999999999999999999998888
No 185
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.42 E-value=8.8e-07 Score=90.61 Aligned_cols=98 Identities=15% Similarity=0.281 Sum_probs=79.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... .-..++.++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~--------------------------------~~~~~~~~~ 190 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR--------------------------------VLGRRIGAW 190 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH--------------------------------HHCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh--------------------------------hcCHHHHHH
Confidence 478999999999999999999999999999997644100 012567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... ....|++.+++ ++.+|.||+|+|.
T Consensus 191 l~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~~~~v~~~dg~-------~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 191 LRGLLTELGV--QVELGTGVVGFSGEG----------------------QLEQVMASDGR-------SFVADSALICVGA 239 (410)
T ss_dssp HHHHHHHHTC--EEECSCCEEEEECSS----------------------SCCEEEETTSC-------EEECSEEEECSCE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEeccC----------------------cEEEEEECCCC-------EEEcCEEEEeeCC
Confidence 8888899999 899999999998643 34567777765 8999999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 240 ~ 240 (410)
T 3ef6_A 240 E 240 (410)
T ss_dssp E
T ss_pred e
Confidence 5
No 186
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.40 E-value=1.4e-06 Score=88.97 Aligned_cols=99 Identities=16% Similarity=0.275 Sum_probs=79.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + . ....++.++
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~--------------------------~----~--~~~~~~~~~ 189 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM--------------------------A----R--VVTPEISSY 189 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT--------------------------T----T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch--------------------------h----h--ccCHHHHHH
Confidence 3789999999999999999999999999999876441 0 0 123678888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.++.... .....|++.+++ ++.+|.||+|+|.
T Consensus 190 l~~~l~~~GV--~i~~~~~v~~i~~~~---------------------~~v~~V~~~dG~-------~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 190 FHDRHSGAGI--RMHYGVRATEIAAEG---------------------DRVTGVVLSDGN-------TLPCDLVVVGVGV 239 (404)
T ss_dssp HHHHHHHTTC--EEECSCCEEEEEEET---------------------TEEEEEEETTSC-------EEECSEEEECCCE
T ss_pred HHHHHHhCCc--EEEECCEEEEEEecC---------------------CcEEEEEeCCCC-------EEEcCEEEECcCC
Confidence 9999999999 899999999998753 122356666665 8999999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 240 ~ 240 (404)
T 3fg2_P 240 I 240 (404)
T ss_dssp E
T ss_pred c
Confidence 5
No 187
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.39 E-value=1.2e-06 Score=91.91 Aligned_cols=102 Identities=14% Similarity=0.157 Sum_probs=81.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLEN---GFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKV 106 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~---g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (523)
.++|+|||+|+.|+.+|..|.+. |.+|+++++.+.+. +. -..++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~ 233 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-------------------------------RG--FDSEL 233 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-------------------------------TT--SCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-------------------------------cc--cCHHH
Confidence 47899999999999999999998 99999999976541 00 12567
Q ss_pred HHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEe
Q 009897 107 MEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILC 186 (523)
Q Consensus 107 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlA 186 (523)
.+.+.+..++.++ .++++++|.+++... ++...|++.+++ ++.+|.||+|
T Consensus 234 ~~~l~~~l~~~GV--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~G~-------~i~~D~vv~a 283 (490)
T 1fec_A 234 RKQLTEQLRANGI--NVRTHENPAKVTKNA---------------------DGTRHVVFESGA-------EADYDVVMLA 283 (490)
T ss_dssp HHHHHHHHHHTTE--EEEETCCEEEEEECT---------------------TSCEEEEETTSC-------EEEESEEEEC
T ss_pred HHHHHHHHHhCCC--EEEeCCEEEEEEEcC---------------------CCEEEEEECCCc-------EEEcCEEEEc
Confidence 8888888888898 899999999998753 234677776654 7999999999
Q ss_pred eeecCCCCCCC
Q 009897 187 IGRYSDLPNTP 197 (523)
Q Consensus 187 tG~~s~~p~~p 197 (523)
+|.. |+..
T Consensus 284 ~G~~---p~~~ 291 (490)
T 1fec_A 284 IGRV---PRSQ 291 (490)
T ss_dssp SCEE---ESCT
T ss_pred cCCC---cCcc
Confidence 9965 5543
No 188
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.39 E-value=1.7e-06 Score=89.94 Aligned_cols=103 Identities=22% Similarity=0.235 Sum_probs=80.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 217 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-------------------------------PN--EDADVSKE 217 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4799999999999999999999999999999976541 10 12567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEe-ecccCCcceeEEEeCEEEEeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQ-EARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~d~vVlAtG 188 (523)
+.+..++.++ .++++++|.+++... +...|++. ++ +..++.+|.||+|+|
T Consensus 218 l~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~g-----~~~~~~~D~vv~a~G 268 (464)
T 2a8x_A 218 IEKQFKKLGV--TILTATKVESIADGG----------------------SQVTVTVTKDG-----VAQELKAEKVLQAIG 268 (464)
T ss_dssp HHHHHHHHTC--EEECSCEEEEEEECS----------------------SCEEEEEESSS-----CEEEEEESEEEECSC
T ss_pred HHHHHHHcCC--EEEeCcEEEEEEEcC----------------------CeEEEEEEcCC-----ceEEEEcCEEEECCC
Confidence 8888889999 899999999998753 34556654 33 123789999999999
Q ss_pred ecCCCCCCC
Q 009897 189 RYSDLPNTP 197 (523)
Q Consensus 189 ~~s~~p~~p 197 (523)
.. |+..
T Consensus 269 ~~---p~~~ 274 (464)
T 2a8x_A 269 FA---PNVE 274 (464)
T ss_dssp EE---ECCS
T ss_pred CC---ccCC
Confidence 65 5543
No 189
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.39 E-value=1.8e-06 Score=89.94 Aligned_cols=99 Identities=19% Similarity=0.193 Sum_probs=78.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. -..++.++
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~ 220 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA-------------------------------PT--LDEDVTNA 220 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc-------------------------------cc--CCHHHHHH
Confidence 4789999999999999999999999999999976541 00 12567788
Q ss_pred HHHHH-HHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEe--ecccCCcceeEEEeCEEEEe
Q 009897 110 LQAYA-AHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQ--EARNVSSATEAYQVDFVILC 186 (523)
Q Consensus 110 l~~~~-~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~d~vVlA 186 (523)
+.+.. ++.++ .++++++|.+++... +...|++. ++ +..++.+|.||+|
T Consensus 221 l~~~l~~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~~g-----~~~~i~~D~vv~a 271 (468)
T 2qae_A 221 LVGALAKNEKM--KFMTSTKVVGGTNNG----------------------DSVSLEVEGKNG-----KRETVTCEALLVS 271 (468)
T ss_dssp HHHHHHHHTCC--EEECSCEEEEEEECS----------------------SSEEEEEECC--------EEEEEESEEEEC
T ss_pred HHHHHhhcCCc--EEEeCCEEEEEEEcC----------------------CeEEEEEEcCCC-----ceEEEECCEEEEC
Confidence 88888 88898 899999999998754 34667665 33 1237899999999
Q ss_pred eeec
Q 009897 187 IGRY 190 (523)
Q Consensus 187 tG~~ 190 (523)
+|..
T Consensus 272 ~G~~ 275 (468)
T 2qae_A 272 VGRR 275 (468)
T ss_dssp SCEE
T ss_pred CCcc
Confidence 9965
No 190
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.38 E-value=1.3e-06 Score=89.15 Aligned_cols=94 Identities=20% Similarity=0.373 Sum_probs=76.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ....++.++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------~--~~~~~~~~~ 192 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS------------------------------R--AAPATLADF 192 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc------------------------------c--ccCHHHHHH
Confidence 47899999999999999999999999999999764410 0 012567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++ . + .|++.++. ++.+|.||+|+|.
T Consensus 193 l~~~l~~~GV--~i~~~~~v~~i~--~----------------------~--~v~~~~g~-------~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 193 VARYHAAQGV--DLRFERSVTGSV--D----------------------G--VVLLDDGT-------RIAADMVVVGIGV 237 (408)
T ss_dssp HHHHHHHTTC--EEEESCCEEEEE--T----------------------T--EEEETTSC-------EEECSEEEECSCE
T ss_pred HHHHHHHcCc--EEEeCCEEEEEE--C----------------------C--EEEECCCC-------EEEcCEEEECcCC
Confidence 8888899999 899999999988 4 2 56666554 7999999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 238 ~ 238 (408)
T 2gqw_A 238 L 238 (408)
T ss_dssp E
T ss_pred C
Confidence 5
No 191
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.38 E-value=1.4e-06 Score=91.45 Aligned_cols=102 Identities=19% Similarity=0.216 Sum_probs=81.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLEN---GFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKV 106 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~---g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (523)
.++|+|||+|+.|+.+|..|.+. |.+|+++++.+.+. .. -..++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~ 237 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-------------------------------RG--FDETI 237 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-------------------------------TT--SCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-------------------------------cc--cCHHH
Confidence 47899999999999999999998 99999999976541 00 12567
Q ss_pred HHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEe
Q 009897 107 MEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILC 186 (523)
Q Consensus 107 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlA 186 (523)
.+.+.+..++.++ .++++++|.+++... ++...|++.+++ ++.+|.||+|
T Consensus 238 ~~~l~~~l~~~GV--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~G~-------~i~~D~vv~a 287 (495)
T 2wpf_A 238 REEVTKQLTANGI--EIMTNENPAKVSLNT---------------------DGSKHVTFESGK-------TLDVDVVMMA 287 (495)
T ss_dssp HHHHHHHHHHTTC--EEEESCCEEEEEECT---------------------TSCEEEEETTSC-------EEEESEEEEC
T ss_pred HHHHHHHHHhCCC--EEEeCCEEEEEEEcC---------------------CceEEEEECCCc-------EEEcCEEEEC
Confidence 7888888888999 899999999998753 234677776654 7999999999
Q ss_pred eeecCCCCCCC
Q 009897 187 IGRYSDLPNTP 197 (523)
Q Consensus 187 tG~~s~~p~~p 197 (523)
+|.. |+..
T Consensus 288 ~G~~---p~~~ 295 (495)
T 2wpf_A 288 IGRI---PRTN 295 (495)
T ss_dssp SCEE---ECCG
T ss_pred CCCc---cccc
Confidence 9965 5553
No 192
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.38 E-value=2e-06 Score=88.58 Aligned_cols=99 Identities=16% Similarity=0.257 Sum_probs=78.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. ....++.++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 196 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL-------------------------------ER-VTAPPVSAF 196 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT-------------------------------TT-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc-------------------------------cc-hhhHHHHHH
Confidence 4789999999999999999999999999999865431 00 012567788
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEe--CCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDR--LVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCI 187 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAt 187 (523)
+.+..++.|+ .++++++|.+++. .+ .....|++.++. ++.+|.||+|+
T Consensus 197 l~~~l~~~GV--~i~~~~~v~~i~~~~~~---------------------~~v~~v~~~~G~-------~i~~D~Vv~a~ 246 (431)
T 1q1r_A 197 YEHLHREAGV--DIRTGTQVCGFEMSTDQ---------------------QKVTAVLCEDGT-------RLPADLVIAGI 246 (431)
T ss_dssp HHHHHHHHTC--EEECSCCEEEEEECTTT---------------------CCEEEEEETTSC-------EEECSEEEECC
T ss_pred HHHHHHhCCe--EEEeCCEEEEEEeccCC---------------------CcEEEEEeCCCC-------EEEcCEEEECC
Confidence 8888888999 8999999999986 32 122357766654 78999999999
Q ss_pred eec
Q 009897 188 GRY 190 (523)
Q Consensus 188 G~~ 190 (523)
|..
T Consensus 247 G~~ 249 (431)
T 1q1r_A 247 GLI 249 (431)
T ss_dssp CEE
T ss_pred CCC
Confidence 965
No 193
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.37 E-value=1.4e-06 Score=90.94 Aligned_cols=102 Identities=15% Similarity=0.208 Sum_probs=80.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. -.+++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~ 231 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-------------------------------RK--FDECIQNT 231 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc-------------------------------cc--cCHHHHHH
Confidence 4789999999999999999999999999999976541 11 12567788
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCC-CeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSG-KWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
+.+..++.++ .++++++|.+++... ++ ...|++.+++ .++.+|.||+|+|
T Consensus 232 l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~~v~~~~G~------~~i~~D~vv~a~G 282 (479)
T 2hqm_A 232 ITDHYVKEGI--NVHKLSKIVKVEKNV---------------------ETDKLKIHMNDSK------SIDDVDELIWTIG 282 (479)
T ss_dssp HHHHHHHHTC--EEECSCCEEEEEECC----------------------CCCEEEEETTSC------EEEEESEEEECSC
T ss_pred HHHHHHhCCe--EEEeCCEEEEEEEcC---------------------CCcEEEEEECCCc------EEEEcCEEEECCC
Confidence 8888888899 899999999998753 12 3566665551 2799999999999
Q ss_pred ecCCCCCC
Q 009897 189 RYSDLPNT 196 (523)
Q Consensus 189 ~~s~~p~~ 196 (523)
.. |+.
T Consensus 283 ~~---p~~ 287 (479)
T 2hqm_A 283 RK---SHL 287 (479)
T ss_dssp EE---ECC
T ss_pred CC---Ccc
Confidence 65 554
No 194
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.37 E-value=2.3e-06 Score=89.60 Aligned_cols=106 Identities=23% Similarity=0.259 Sum_probs=82.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. -..++.+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~ 244 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL-------------------------------GG--MDGEVAKQ 244 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------SS--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc-------------------------------cc--CCHHHHHH
Confidence 4789999999999999999999999999999876541 11 12567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... +...|++.+.. +++..++.+|.||+|+|.
T Consensus 245 l~~~l~~~gV--~v~~~~~v~~i~~~~----------------------~~~~v~~~~~~--~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 245 LQRMLTKQGI--DFKLGAKVTGAVKSG----------------------DGAKVTFEPVK--GGEATTLDAEVVLIATGR 298 (491)
T ss_dssp HHHHHHHTTC--EEECSEEEEEEEEET----------------------TEEEEEEEETT--SCCCEEEEESEEEECCCC
T ss_pred HHHHHHhCCC--EEEECCeEEEEEEeC----------------------CEEEEEEEecC--CCceEEEEcCEEEEeeCC
Confidence 8888888898 899999999998754 45667776522 122347899999999995
Q ss_pred cCCCCCCC
Q 009897 190 YSDLPNTP 197 (523)
Q Consensus 190 ~s~~p~~p 197 (523)
. |+..
T Consensus 299 ~---p~~~ 303 (491)
T 3urh_A 299 K---PSTD 303 (491)
T ss_dssp E---ECCT
T ss_pred c---cCCC
Confidence 4 5554
No 195
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.37 E-value=6.4e-07 Score=93.04 Aligned_cols=101 Identities=18% Similarity=0.226 Sum_probs=77.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||||++|+.+|..|++.|.+|+|+|+.+.+. +. ...++.++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 217 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL-------------------------------PT--YDSELTAP 217 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4789999999999999999999999999999976541 00 12567788
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++. . + ..++..++ +..++.+|.||+|+|.
T Consensus 218 l~~~l~~~gv--~i~~~~~v~~i~~-~----------------------~-v~v~~~~G-----~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 218 VAESLKKLGI--ALHLGHSVEGYEN-G----------------------C-LLANDGKG-----GQLRLEADRVLVAVGR 266 (458)
T ss_dssp HHHHHHHHTC--EEETTCEEEEEET-T----------------------E-EEEECSSS-----CCCEECCSCEEECCCE
T ss_pred HHHHHHHCCC--EEEECCEEEEEEe-C----------------------C-EEEEECCC-----ceEEEECCEEEECcCC
Confidence 8888888899 8999999999886 4 2 33331122 1237899999999996
Q ss_pred cCCCCCCC
Q 009897 190 YSDLPNTP 197 (523)
Q Consensus 190 ~s~~p~~p 197 (523)
. |+.+
T Consensus 267 ~---p~~~ 271 (458)
T 1lvl_A 267 R---PRTK 271 (458)
T ss_dssp E---ECCS
T ss_pred C---cCCC
Confidence 5 5554
No 196
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.37 E-value=1.6e-06 Score=90.45 Aligned_cols=104 Identities=26% Similarity=0.384 Sum_probs=78.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++|+.+.+.. .. -.+++.++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------~~--~~~~~~~~ 225 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG------------------------------VG--IDMEISKN 225 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC------------------------------SS--CCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC------------------------------cc--cCHHHHHH
Confidence 47899999999999999999999999999999765410 01 12567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... ++...|++.+.. .+...++.+|.||+|+|.
T Consensus 226 l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~~~--~~~~~~i~~D~vv~a~G~ 280 (474)
T 1zmd_A 226 FQRILQKQGF--KFKLNTKVTGATKKS---------------------DGKIDVSIEAAS--GGKAEVITCDVLLVCIGR 280 (474)
T ss_dssp HHHHHHHTTC--EEECSEEEEEEEECT---------------------TSCEEEEEEETT--SCCCEEEEESEEEECSCE
T ss_pred HHHHHHHCCC--EEEeCceEEEEEEcC---------------------CceEEEEEEecC--CCCceEEEcCEEEECcCC
Confidence 8888999999 899999999998754 122666653211 011127899999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 281 ~ 281 (474)
T 1zmd_A 281 R 281 (474)
T ss_dssp E
T ss_pred C
Confidence 5
No 197
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.37 E-value=2.3e-06 Score=88.72 Aligned_cols=101 Identities=18% Similarity=0.252 Sum_probs=79.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ... -..++.+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~~-~d~~~~~~ 194 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL-------------------------------PKY-FDKEMVAE 194 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TTT-CCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc-------------------------------ccc-CCHHHHHH
Confidence 3789999999999999999999999999999976441 000 12677888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++..+ ++..|.+.++ ++.+|.||+|+|.
T Consensus 195 l~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~~v~v~~~~g--------~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 195 VQKSLEKQAV--IFHFEETVLGIEETA----------------------NGIVLETSEQ--------EISCDSGIFALNL 242 (452)
T ss_dssp HHHHHHTTTE--EEEETCCEEEEEECS----------------------SCEEEEESSC--------EEEESEEEECSCC
T ss_pred HHHHHHHcCC--EEEeCCEEEEEEccC----------------------CeEEEEECCC--------EEEeCEEEECcCC
Confidence 8888888888 899999999998643 3455655332 7899999999995
Q ss_pred cCCCCCCC
Q 009897 190 YSDLPNTP 197 (523)
Q Consensus 190 ~s~~p~~p 197 (523)
. |+..
T Consensus 243 ~---p~~~ 247 (452)
T 3oc4_A 243 H---PQLA 247 (452)
T ss_dssp B---CCCS
T ss_pred C---CChH
Confidence 4 6654
No 198
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.36 E-value=1.9e-06 Score=90.48 Aligned_cols=97 Identities=16% Similarity=0.208 Sum_probs=78.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. -..++.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~ 228 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL-------------------------------PY--EDADAALV 228 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS-------------------------------CC--SSHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4789999999999999999999999999999976541 11 12567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.|+ .++++++|.+++... ++..|++.++. ++.+|.||+|+|.
T Consensus 229 l~~~l~~~GV--~i~~~~~V~~i~~~~----------------------~~v~v~~~~g~-------~i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 229 LEESFAERGV--RLFKNARAASVTRTG----------------------AGVLVTMTDGR-------TVEGSHALMTIGS 277 (499)
T ss_dssp HHHHHHHTTC--EEETTCCEEEEEECS----------------------SSEEEEETTSC-------EEEESEEEECCCE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEEEeC----------------------CEEEEEECCCc-------EEEcCEEEECCCC
Confidence 8888999999 899999999998754 34566654443 7999999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 278 ~ 278 (499)
T 1xdi_A 278 V 278 (499)
T ss_dssp E
T ss_pred C
Confidence 5
No 199
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.35 E-value=1.5e-06 Score=90.35 Aligned_cols=102 Identities=21% Similarity=0.219 Sum_probs=79.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+. .. -..++.++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 212 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL-------------------------------FQ--FDPLLSAT 212 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4789999999999999999999999999999876441 11 12467778
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... ++..|++.+++ . ++.+|.||+|+|.
T Consensus 213 l~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~G~-----~-~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 213 LAENMHAQGI--ETHLEFAVAALERDA----------------------QGTTLVAQDGT-----R-LEGFDSVIWAVGR 262 (463)
T ss_dssp HHHHHHHTTC--EEESSCCEEEEEEET----------------------TEEEEEETTCC-----E-EEEESEEEECSCE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEEEeC----------------------CeEEEEEeCCc-----E-EEEcCEEEECCCC
Confidence 8888888898 899999999998754 23667665442 1 5899999999996
Q ss_pred cCCCCCCC
Q 009897 190 YSDLPNTP 197 (523)
Q Consensus 190 ~s~~p~~p 197 (523)
. |+..
T Consensus 263 ~---p~~~ 267 (463)
T 2r9z_A 263 A---PNTR 267 (463)
T ss_dssp E---ESCT
T ss_pred C---cCCC
Confidence 5 5543
No 200
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.34 E-value=8.8e-07 Score=92.61 Aligned_cols=104 Identities=24% Similarity=0.251 Sum_probs=79.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||||+.|+.+|..|.+.|.+|+|+|+.+.+. .. -..++.++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 231 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM-------------------------------QG--ADRDLVKV 231 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-------------------------------cc--cCHHHHHH
Confidence 4799999999999999999999999999999976541 00 12567788
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... +...|++.+.. +.+ .++.+|.||+|+|.
T Consensus 232 l~~~l~~~gV--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~~-~~g--~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 232 WQKQNEYRFD--NIMVNTKTVAVEPKE----------------------DGVYVTFEGAN-APK--EPQRYDAVLVAAGR 284 (482)
T ss_dssp HHHHHGGGEE--EEECSCEEEEEEEET----------------------TEEEEEEESSS-CCS--SCEEESCEEECCCE
T ss_pred HHHHHHhcCC--EEEECCEEEEEEEcC----------------------CeEEEEEeccC-CCc--eEEEcCEEEECcCC
Confidence 8888888888 899999999998753 34567766510 001 16789999999996
Q ss_pred cCCCCCC
Q 009897 190 YSDLPNT 196 (523)
Q Consensus 190 ~s~~p~~ 196 (523)
. |+.
T Consensus 285 ~---p~~ 288 (482)
T 1ojt_A 285 A---PNG 288 (482)
T ss_dssp E---ECG
T ss_pred C---cCC
Confidence 5 554
No 201
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.34 E-value=1.5e-06 Score=90.61 Aligned_cols=102 Identities=24% Similarity=0.261 Sum_probs=79.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. . ....++.++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~--~~~~~~~~~ 223 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV-------------------------------P--TMDAEIRKQ 223 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------c--cccHHHHHH
Confidence 4789999999999999999999999999999976541 0 012577888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... +...|++.+.. +++..++.+|.||+|+|.
T Consensus 224 l~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~~--~g~~~~~~~D~vv~a~G~ 277 (470)
T 1dxl_A 224 FQRSLEKQGM--KFKLKTKVVGVDTSG----------------------DGVKLTVEPSA--GGEQTIIEADVVLVSAGR 277 (470)
T ss_dssp HHHHHHHSSC--CEECSEEEEEEECSS----------------------SSEEEEEEESS--SCCCEEEEESEEECCCCE
T ss_pred HHHHHHHcCC--EEEeCCEEEEEEEcC----------------------CeEEEEEEecC--CCcceEEECCEEEECCCC
Confidence 8888999999 899999999998653 34666665311 111237899999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 278 ~ 278 (470)
T 1dxl_A 278 T 278 (470)
T ss_dssp E
T ss_pred C
Confidence 5
No 202
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.33 E-value=2.1e-06 Score=89.39 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=77.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ...++.+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~ 221 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-------------------------------R---EDPAIGEA 221 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T---SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-------------------------------C---CCHHHHHH
Confidence 4789999999999999999999999999999976441 1 12567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... +.+.|.+. +. ++.+|.||+|+|.
T Consensus 222 l~~~l~~~Gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~-~~-------~i~aD~Vv~a~G~ 269 (467)
T 1zk7_A 222 VTAAFRAEGI--EVLEHTQASQVAHMD----------------------GEFVLTTT-HG-------ELRADKLLVATGR 269 (467)
T ss_dssp HHHHHHHTTC--EEETTCCEEEEEEET----------------------TEEEEEET-TE-------EEEESEEEECSCE
T ss_pred HHHHHHhCCC--EEEcCCEEEEEEEeC----------------------CEEEEEEC-Cc-------EEEcCEEEECCCC
Confidence 8888888898 899999999998753 34666654 22 7899999999997
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 270 ~ 270 (467)
T 1zk7_A 270 T 270 (467)
T ss_dssp E
T ss_pred C
Confidence 5
No 203
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.33 E-value=2.2e-06 Score=90.45 Aligned_cols=102 Identities=15% Similarity=0.133 Sum_probs=82.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
..++++|||||+.|+..|..+.+.|.+|+|++++..+ +. ..+++.+
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L--------------------------------~~--~D~ei~~ 267 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL--------------------------------RG--FDQQCAV 267 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS--------------------------------TT--SCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc--------------------------------cc--cchhHHH
Confidence 4589999999999999999999999999999874322 01 1267888
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
.++...++.++ .+++++.|..+.... +...|.+.++. ++.+|.|++|+|
T Consensus 268 ~l~~~l~~~gi--~~~~~~~v~~~~~~~----------------------~~~~v~~~~~~-------~~~~D~vLvAvG 316 (542)
T 4b1b_A 268 KVKLYMEEQGV--MFKNGILPKKLTKMD----------------------DKILVEFSDKT-------SELYDTVLYAIG 316 (542)
T ss_dssp HHHHHHHHTTC--EEEETCCEEEEEEET----------------------TEEEEEETTSC-------EEEESEEEECSC
T ss_pred HHHHHHHhhcc--eeecceEEEEEEecC----------------------CeEEEEEcCCC-------eEEEEEEEEccc
Confidence 89999999999 899999999998865 45667666654 788999999999
Q ss_pred ecCCCCCCCC
Q 009897 189 RYSDLPNTPD 198 (523)
Q Consensus 189 ~~s~~p~~p~ 198 (523)
. .|++-.
T Consensus 317 R---~Pnt~~ 323 (542)
T 4b1b_A 317 R---KGDIDG 323 (542)
T ss_dssp E---EESCGG
T ss_pred c---cCCccc
Confidence 5 477653
No 204
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.33 E-value=2.8e-06 Score=88.47 Aligned_cols=98 Identities=21% Similarity=0.265 Sum_probs=80.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHC-CCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLEN-GFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~-g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
.++|+|||+|+.|+.+|..|.+. |.+|+++++.+.+. .. ....++.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~ 206 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM-------------------------------PG-FTSKSLSQ 206 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS-------------------------------TT-TSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc-------------------------------cc-ccCHHHHH
Confidence 47899999999999999999999 99999999876441 00 01257888
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
.+.+..++.++ .++++++|.+++..+ +...|.+.+++ ++.+|.||+|+|
T Consensus 207 ~l~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~~v~v~~~~g~-------~i~aD~Vv~a~G 255 (472)
T 3iwa_A 207 MLRHDLEKNDV--VVHTGEKVVRLEGEN----------------------GKVARVITDKR-------TLDADLVILAAG 255 (472)
T ss_dssp HHHHHHHHTTC--EEECSCCEEEEEESS----------------------SBEEEEEESSC-------EEECSEEEECSC
T ss_pred HHHHHHHhcCC--EEEeCCEEEEEEccC----------------------CeEEEEEeCCC-------EEEcCEEEECCC
Confidence 88888999999 899999999998743 45667777665 899999999999
Q ss_pred ec
Q 009897 189 RY 190 (523)
Q Consensus 189 ~~ 190 (523)
..
T Consensus 256 ~~ 257 (472)
T 3iwa_A 256 VS 257 (472)
T ss_dssp EE
T ss_pred CC
Confidence 65
No 205
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.32 E-value=3e-06 Score=88.76 Aligned_cols=105 Identities=17% Similarity=0.220 Sum_probs=79.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
..++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. ...++.+
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~ 219 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA-------------------------------NL--QDEEMKR 219 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT-------------------------------TC--CCHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-------------------------------cc--CCHHHHH
Confidence 35899999999999999999999999999999976541 00 1256777
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
.+.+..++. + .++++++|..++... +...|++.+. +++..++.+|.||+|+|
T Consensus 220 ~l~~~l~~~-V--~i~~~~~v~~i~~~~----------------------~~v~v~~~~~---~G~~~~i~~D~Vi~a~G 271 (492)
T 3ic9_A 220 YAEKTFNEE-F--YFDAKARVISTIEKE----------------------DAVEVIYFDK---SGQKTTESFQYVLAATG 271 (492)
T ss_dssp HHHHHHHTT-S--EEETTCEEEEEEECS----------------------SSEEEEEECT---TCCEEEEEESEEEECSC
T ss_pred HHHHHHhhC-c--EEEECCEEEEEEEcC----------------------CEEEEEEEeC---CCceEEEECCEEEEeeC
Confidence 777777665 6 889999999998754 4466666521 12223799999999999
Q ss_pred ecCCCCCCC
Q 009897 189 RYSDLPNTP 197 (523)
Q Consensus 189 ~~s~~p~~p 197 (523)
.. |+..
T Consensus 272 ~~---p~~~ 277 (492)
T 3ic9_A 272 RK---ANVD 277 (492)
T ss_dssp CE---ESCS
T ss_pred Cc---cCCC
Confidence 54 6654
No 206
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.31 E-value=2.4e-06 Score=89.53 Aligned_cols=101 Identities=18% Similarity=0.299 Sum_probs=78.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. .. .-..++.++
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 241 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCL-------------------------------AG-YYDRDLTDL 241 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-------------------------------TT-TSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchh-------------------------------hh-HHHHHHHHH
Confidence 4789999999999999999999999999999976441 00 012577888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++.+. ....|.+ ++. ++.+|.||+|+|.
T Consensus 242 l~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~v~~v~~-~g~-------~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 242 MAKNMEEHGI--QLAFGETVKEVAGNG----------------------KVEKIIT-DKN-------EYDVDMVILAVGF 289 (490)
T ss_dssp HHHHHHTTTC--EEEETCCEEEEECSS----------------------SCCEEEE-SSC-------EEECSEEEECCCE
T ss_pred HHHHHHhCCe--EEEeCCEEEEEEcCC----------------------cEEEEEE-CCc-------EEECCEEEECCCC
Confidence 8888888898 899999999998532 1223444 333 7999999999996
Q ss_pred cCCCCCCC
Q 009897 190 YSDLPNTP 197 (523)
Q Consensus 190 ~s~~p~~p 197 (523)
. |+.+
T Consensus 290 ~---p~~~ 294 (490)
T 2bc0_A 290 R---PNTT 294 (490)
T ss_dssp E---ECCG
T ss_pred C---cChH
Confidence 5 5554
No 207
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.31 E-value=2.9e-06 Score=88.74 Aligned_cols=97 Identities=20% Similarity=0.268 Sum_probs=80.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. ...++.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~~--~~~~~~~~ 237 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL-------------------------------RN--FDYDLRQL 237 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc-------------------------------cc--cCHHHHHH
Confidence 4799999999999999999999999999999876441 11 12567788
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+.+++.++ .++++++|.+++... +++.|++.++. ++.+|.||+|+|.
T Consensus 238 l~~~l~~~Gv--~i~~~~~V~~i~~~~----------------------~~v~v~~~~g~-------~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 238 LNDAMVAKGI--SIIYEATVSQVQSTE----------------------NCYNVVLTNGQ-------TICADRVMLATGR 286 (484)
T ss_dssp HHHHHHHHTC--EEESSCCEEEEEECS----------------------SSEEEEETTSC-------EEEESEEEECCCE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEEeeC----------------------CEEEEEECCCc-------EEEcCEEEEeeCC
Confidence 8888888899 899999999998764 45778777664 7999999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 287 ~ 287 (484)
T 3o0h_A 287 V 287 (484)
T ss_dssp E
T ss_pred C
Confidence 5
No 208
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.30 E-value=1.3e-06 Score=91.37 Aligned_cols=96 Identities=23% Similarity=0.308 Sum_probs=75.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.++
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 232 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT---------------------------------IYDGDMAEY 232 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS---------------------------------SSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh---------------------------------cCCHHHHHH
Confidence 47899999999999999999999999999998754411 012567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... +.+.+.+. +. ++.+|.||+|+|.
T Consensus 233 l~~~l~~~Gv--~i~~~~~v~~i~~~~----------------------~v~~v~~~-~~-------~i~~D~vi~a~G~ 280 (480)
T 3cgb_A 233 IYKEADKHHI--EILTNENVKAFKGNE----------------------RVEAVETD-KG-------TYKADLVLVSVGV 280 (480)
T ss_dssp HHHHHHHTTC--EEECSCCEEEEEESS----------------------BEEEEEET-TE-------EEECSEEEECSCE
T ss_pred HHHHHHHcCc--EEEcCCEEEEEEcCC----------------------cEEEEEEC-CC-------EEEcCEEEECcCC
Confidence 8888899999 899999999998642 22334442 22 7899999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 281 ~ 281 (480)
T 3cgb_A 281 K 281 (480)
T ss_dssp E
T ss_pred C
Confidence 5
No 209
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.30 E-value=3.7e-06 Score=87.68 Aligned_cols=104 Identities=25% Similarity=0.270 Sum_probs=82.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. . ....++.+.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 226 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL-------------------------------P--AVDEQVAKE 226 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC-------------------------------c--ccCHHHHHH
Confidence 4789999999999999999999999999999976541 1 012567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... +...|++.++. + ...+.+|.||+|+|.
T Consensus 227 l~~~l~~~Gv--~v~~~~~v~~i~~~~----------------------~~~~v~~~~~~---g-~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 227 AQKILTKQGL--KILLGARVTGTEVKN----------------------KQVTVKFVDAE---G-EKSQAFDKLIVAVGR 278 (476)
T ss_dssp HHHHHHHTTE--EEEETCEEEEEEECS----------------------SCEEEEEESSS---E-EEEEEESEEEECSCE
T ss_pred HHHHHHhCCC--EEEECCEEEEEEEcC----------------------CEEEEEEEeCC---C-cEEEECCEEEEeeCC
Confidence 8888888898 899999999998754 45667776542 1 237899999999996
Q ss_pred cCCCCCCC
Q 009897 190 YSDLPNTP 197 (523)
Q Consensus 190 ~s~~p~~p 197 (523)
. |+..
T Consensus 279 ~---p~~~ 283 (476)
T 3lad_A 279 R---PVTT 283 (476)
T ss_dssp E---ECCT
T ss_pred c---ccCC
Confidence 5 5554
No 210
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.28 E-value=2.9e-06 Score=87.86 Aligned_cols=101 Identities=19% Similarity=0.302 Sum_probs=77.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. .. .-..++.++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 196 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL-------------------------------YK-YFDKEFTDI 196 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT-------------------------------TT-TSCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh-------------------------------hh-hhhhhHHHH
Confidence 3789999999999999999999999999999876441 00 012567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeE-EEEeecccCCcceeEEEeCEEEEeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWN-VTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
+.+..++.++ .++++++|.+++..+ ++.. |.+ ++. ++.+|.||+|+|
T Consensus 197 l~~~l~~~Gv--~i~~~~~v~~i~~~~----------------------~~v~~v~~-~g~-------~i~~D~vv~a~G 244 (452)
T 2cdu_A 197 LAKDYEAHGV--NLVLGSKVAAFEEVD----------------------DEIITKTL-DGK-------EIKSDIAILCIG 244 (452)
T ss_dssp HHHHHHHTTC--EEEESSCEEEEEEET----------------------TEEEEEET-TSC-------EEEESEEEECCC
T ss_pred HHHHHHHCCC--EEEcCCeeEEEEcCC----------------------CeEEEEEe-CCC-------EEECCEEEECcC
Confidence 8888999999 899999999998633 2232 332 333 789999999999
Q ss_pred ecCCCCCCC
Q 009897 189 RYSDLPNTP 197 (523)
Q Consensus 189 ~~s~~p~~p 197 (523)
.. |+..
T Consensus 245 ~~---p~~~ 250 (452)
T 2cdu_A 245 FR---PNTE 250 (452)
T ss_dssp EE---ECCG
T ss_pred CC---CCHH
Confidence 65 5543
No 211
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.28 E-value=4e-06 Score=89.45 Aligned_cols=114 Identities=15% Similarity=0.261 Sum_probs=79.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEYL 110 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 110 (523)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. . ....++.+++
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~l 198 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM-------------------------------T--PVDREMAGFA 198 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC-------------------------------T--TSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc-------------------------------h--hcCHHHHHHH
Confidence 689999999999999999999999999999976441 1 1125778888
Q ss_pred HHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCC-CCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 111 QAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTG-KPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
.+..++.++ .++++++|.+++...... ......+.. .....++...+.+.+++ ++.+|.||+|+|.
T Consensus 199 ~~~l~~~GV--~i~~~~~v~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~g~-------~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 199 HQAIRDQGV--DLRLGTALSEVSYQVQTH----VASDAAGEDTAHQHIKGHLSLTLSNGE-------LLETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHTTC--EEEETCCEEEEEEECCCC----CCCGGGTCCCTTCCTTCEEEEEETTSC-------EEEESEEEECSCE
T ss_pred HHHHHHCCC--EEEeCCeEEEEecccccc----ccccccccccccccCCCcEEEEEcCCC-------EEEcCEEEECcCC
Confidence 888889999 899999999998731000 000000000 00001244566665554 7999999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 266 ~ 266 (565)
T 3ntd_A 266 R 266 (565)
T ss_dssp E
T ss_pred c
Confidence 5
No 212
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.26 E-value=7.3e-06 Score=85.63 Aligned_cols=106 Identities=20% Similarity=0.240 Sum_probs=82.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.. + ... -..++.++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~-------------------------------l~~--~d~~~~~~ 232 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI-V-------------------------------LRG--FDQQMAEL 232 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC-S-------------------------------STT--SCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC-C-------------------------------Ccc--cCHHHHHH
Confidence 4789999999999999999999999999998842 2 001 12577888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... ++...|++.++. +++..++.+|.||+|+|.
T Consensus 233 l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~~~--~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 233 VAASMEERGI--PFLRKTVPLSVEKQD---------------------DGKLLVKYKNVE--TGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHTTC--CEEETEEEEEEEECT---------------------TSCEEEEEEETT--TCCEEEEEESEEEECSCE
T ss_pred HHHHHHhCCC--EEEeCCEEEEEEEcC---------------------CCcEEEEEecCC--CCceeEEEcCEEEECccc
Confidence 8888899999 899999999998754 244667777653 233447899999999996
Q ss_pred cCCCCCCC
Q 009897 190 YSDLPNTP 197 (523)
Q Consensus 190 ~s~~p~~p 197 (523)
. |+..
T Consensus 288 ~---p~~~ 292 (483)
T 3dgh_A 288 K---GLVD 292 (483)
T ss_dssp E---ECCG
T ss_pred c---cCcC
Confidence 5 5543
No 213
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.26 E-value=4.5e-07 Score=95.21 Aligned_cols=41 Identities=27% Similarity=0.390 Sum_probs=32.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
|+|+|||||++||+||..|+++|++|+|+|+++.+||....
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t 42 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYV 42 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEE
Confidence 78999999999999999999999999999999999996543
No 214
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.25 E-value=1.7e-06 Score=87.01 Aligned_cols=90 Identities=13% Similarity=0.160 Sum_probs=73.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEYL 110 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 110 (523)
++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. . -.+++.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~l 189 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL-------------------------------G---LDEELSNMI 189 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT-------------------------------T---CCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec-------------------------------c---CCHHHHHHH
Confidence 789999999999999999999999999999976541 1 125778888
Q ss_pred HHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeeec
Q 009897 111 QAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRY 190 (523)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~ 190 (523)
.+..++.++ .++++++|.+++.. .|++.++ ++.+|.||+|+|..
T Consensus 190 ~~~l~~~gV--~i~~~~~v~~i~~~--------------------------~v~~~~g--------~i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 190 KDMLEETGV--KFFLNSELLEANEE--------------------------GVLTNSG--------FIEGKVKICAIGIV 233 (367)
T ss_dssp HHHHHHTTE--EEECSCCEEEECSS--------------------------EEEETTE--------EEECSCEEEECCEE
T ss_pred HHHHHHCCC--EEEcCCEEEEEEee--------------------------EEEECCC--------EEEcCEEEECcCCC
Confidence 888899898 89999999888621 2555433 38999999999965
No 215
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.24 E-value=2.2e-06 Score=88.23 Aligned_cols=107 Identities=15% Similarity=0.066 Sum_probs=73.2
Q ss_pred CCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchH
Q 009897 227 GKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPL 306 (523)
Q Consensus 227 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (523)
.|+|+|||+|..|+.+|..|.+.+.. .+||++.+++.+......
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~-~~VtlI~~~~~~~~~p~l----------------------------------- 45 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPD-LKITLISDRPYFGFTPAF----------------------------------- 45 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTT-CEEEEECSSSEEECGGGH-----------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcC-CeEEEEcCCCCCccCccH-----------------------------------
Confidence 37999999999999999999987754 679999998764321100
Q ss_pred HHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecCceEEecC--cEEEcCCceee
Q 009897 307 LWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSRSFTFCKN--GLVIDGETTPL 384 (523)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~i~~~~~~--~v~l~dG~~~~ 384 (523)
.+.. ... +.++ .+...+.+.+++.+|+++.+.+++++.+ .|++++|++ +
T Consensus 46 ~~v~--------~g~-------~~~~-------------~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~-i 96 (430)
T 3hyw_A 46 PHLA--------MGW-------RKFE-------------DISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKK-I 96 (430)
T ss_dssp HHHH--------HTC-------SCGG-------------GSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCE-E
T ss_pred HHHh--------cCC-------CCHH-------------HhhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCE-E
Confidence 0000 000 0000 0111222445566899999999999854 599999998 9
Q ss_pred eccEEEEecCCCCC
Q 009897 385 VTDIVIFATGYKSD 398 (523)
Q Consensus 385 ~~D~VI~ATG~~~~ 398 (523)
++|.+|+|||-++.
T Consensus 97 ~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 97 EYDYLVIATGPKLV 110 (430)
T ss_dssp ECSEEEECCCCEEE
T ss_pred ECCEEEEeCCCCcc
Confidence 99999999998754
No 216
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.24 E-value=4.9e-06 Score=87.83 Aligned_cols=101 Identities=15% Similarity=0.258 Sum_probs=79.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEYL 110 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 110 (523)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. ...++.+++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 261 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-------------------------------LI--KDNETRAYV 261 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------TC--CSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc-------------------------------cc--ccHHHHHHH
Confidence 899999999999999999999999999999976441 11 126778888
Q ss_pred HHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCC---eEEEEeecccCCcceeEEEeCEEEEee
Q 009897 111 QAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGK---WNVTVQEARNVSSATEAYQVDFVILCI 187 (523)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~d~vVlAt 187 (523)
.+..++.|+ .++++++|.+++... ++. +.|++.+++ .++.+|.||+|+
T Consensus 262 ~~~l~~~GV--~i~~~~~V~~i~~~~---------------------~~~v~~~~v~~~~G~------~~i~aD~Vv~A~ 312 (523)
T 1mo9_A 262 LDRMKEQGM--EIISGSNVTRIEEDA---------------------NGRVQAVVAMTPNGE------MRIETDFVFLGL 312 (523)
T ss_dssp HHHHHHTTC--EEESSCEEEEEEECT---------------------TSBEEEEEEEETTEE------EEEECSCEEECC
T ss_pred HHHHHhCCc--EEEECCEEEEEEEcC---------------------CCceEEEEEEECCCc------EEEEcCEEEECc
Confidence 888999999 899999999998753 122 556664431 268999999999
Q ss_pred eecCCCCCC
Q 009897 188 GRYSDLPNT 196 (523)
Q Consensus 188 G~~s~~p~~ 196 (523)
|.. |+.
T Consensus 313 G~~---p~~ 318 (523)
T 1mo9_A 313 GEQ---PRS 318 (523)
T ss_dssp CCE---ECC
T ss_pred CCc---cCC
Confidence 955 554
No 217
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.23 E-value=9.2e-06 Score=84.96 Aligned_cols=106 Identities=17% Similarity=0.210 Sum_probs=81.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|++.|.+|+++++...+ .. -..++.++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l--------------------------------~~--~d~~~~~~ 230 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL--------------------------------RG--FDQQMSSL 230 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc--------------------------------cc--CCHHHHHH
Confidence 478999999999999999999999999999985311 00 12578888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .+++++.|.++.... ++...|++.+.. +++..++.+|.||+|+|.
T Consensus 231 l~~~l~~~gv--~~~~~~~v~~i~~~~---------------------~~~~~v~~~~~~--~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 231 VTEHMESHGT--QFLKGCVPSHIKKLP---------------------TNQLQVTWEDHA--SGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp HHHHHHHTTC--EEEETEEEEEEEECT---------------------TSCEEEEEEETT--TTEEEEEEESEEEECSCE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEEEcC---------------------CCcEEEEEEeCC--CCeeEEEECCEEEEcccC
Confidence 8888899999 899999999998753 245667776532 123345889999999996
Q ss_pred cCCCCCCC
Q 009897 190 YSDLPNTP 197 (523)
Q Consensus 190 ~s~~p~~p 197 (523)
. |+..
T Consensus 286 ~---p~~~ 290 (488)
T 3dgz_A 286 V---PETR 290 (488)
T ss_dssp E---ESCG
T ss_pred C---cccC
Confidence 5 5554
No 218
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.23 E-value=7.3e-06 Score=85.48 Aligned_cols=108 Identities=16% Similarity=0.174 Sum_probs=81.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
..++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. . ....++.+
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~ 232 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-------------------------------R--SFDSMIST 232 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHH
T ss_pred cCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-------------------------------c--ccCHHHHH
Confidence 34899999999999999999999999999999876541 0 01256788
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCC-CeEEEEeecccCCcce--eEEEeCEEEE
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSG-KWNVTVQEARNVSSAT--EAYQVDFVIL 185 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~--~~~~~d~vVl 185 (523)
++.+..++.++ .++++++|.+++... ++ ...|.+.+.. +++. .++.+|.||+
T Consensus 233 ~~~~~l~~~gv--~i~~~~~v~~i~~~~---------------------~~~~~~v~~~~~~--~g~~~g~~~~~D~vi~ 287 (478)
T 3dk9_A 233 NCTEELENAGV--EVLKFSQVKEVKKTL---------------------SGLEVSMVTAVPG--RLPVMTMIPDVDCLLW 287 (478)
T ss_dssp HHHHHHHHTTC--EEETTEEEEEEEECS---------------------SSEEEEEEECCTT--SCCEEEEEEEESEEEE
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEEcC---------------------CCcEEEEEEccCC--CCcccceEEEcCEEEE
Confidence 88888888898 899999999998754 12 2455555421 1111 3789999999
Q ss_pred eeeecCCCCCCC
Q 009897 186 CIGRYSDLPNTP 197 (523)
Q Consensus 186 AtG~~s~~p~~p 197 (523)
|+|.. |+..
T Consensus 288 a~G~~---p~~~ 296 (478)
T 3dk9_A 288 AIGRV---PNTK 296 (478)
T ss_dssp CSCEE---ESCT
T ss_pred eeccc---cCCC
Confidence 99965 5554
No 219
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.22 E-value=2.4e-06 Score=88.06 Aligned_cols=96 Identities=17% Similarity=0.330 Sum_probs=76.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEYL 110 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 110 (523)
++|+|||||+.|+.+|..+.+.|.+|+++|+.+.+. .. ..+++.+.+
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll-------------------------------~~--~d~~~~~~~ 194 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN-------------------------------KL--MDADMNQPI 194 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS-------------------------------TT--SCGGGGHHH
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccc-------------------------------cc--ccchhHHHH
Confidence 689999999999999999999999999999976541 11 124566778
Q ss_pred HHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeeec
Q 009897 111 QAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRY 190 (523)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~ 190 (523)
.+..++.++ .++++++|.+++.. .|++.+++ ++.+|.||+|+|..
T Consensus 195 ~~~l~~~gV--~i~~~~~v~~~~~~--------------------------~v~~~~g~-------~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 195 LDELDKREI--PYRLNEEINAINGN--------------------------EITFKSGK-------VEHYDMIIEGVGTH 239 (437)
T ss_dssp HHHHHHTTC--CEEESCCEEEEETT--------------------------EEEETTSC-------EEECSEEEECCCEE
T ss_pred HHHhhccce--EEEeccEEEEecCC--------------------------eeeecCCe-------EEeeeeEEEEecee
Confidence 888888899 89999999887642 36666665 89999999999965
Q ss_pred CCCCCCC
Q 009897 191 SDLPNTP 197 (523)
Q Consensus 191 s~~p~~p 197 (523)
|+..
T Consensus 240 ---Pn~~ 243 (437)
T 4eqs_A 240 ---PNSK 243 (437)
T ss_dssp ---ESCG
T ss_pred ---cCcH
Confidence 6543
No 220
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.21 E-value=7.4e-06 Score=80.32 Aligned_cols=102 Identities=18% Similarity=0.270 Sum_probs=75.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|++|+.+|..|.+.|.+|+++++.+.+ .....+.+.
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-----------------------------------~~~~~~~~~ 189 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF-----------------------------------RAEKILIKR 189 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC-----------------------------------CCCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc-----------------------------------ccCHHHHHH
Confidence 478999999999999999999999999999986532 112456667
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+.+++.++ .++++++|.++.... .....|++.+..+ .++..++.+|.||+|+|.
T Consensus 190 l~~~l~~~gv--~i~~~~~v~~i~~~~---------------------~~v~~v~~~~~~~-~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 190 LMDKVENGNI--ILHTNRTLEEVTGDQ---------------------MGVTGVRLRDTQN-SDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHTSSE--EEECSCEEEEEEECS---------------------SSEEEEEEECCTT-CCCCEEEECSEEEECSCE
T ss_pred HHHhcccCCe--EEEcCceeEEEEcCC---------------------CceEEEEEEeccC-CCceEEEEcCEEEEEeCC
Confidence 7777777788 889999999998753 1223466654210 012237899999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 246 ~ 246 (320)
T 1trb_A 246 S 246 (320)
T ss_dssp E
T ss_pred C
Confidence 5
No 221
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.21 E-value=6.8e-07 Score=94.32 Aligned_cols=43 Identities=40% Similarity=0.636 Sum_probs=39.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-CceEEEccCCCCCccccc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENG-FKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g-~~v~v~e~~~~~GG~w~~ 71 (523)
+.+||+|||||++||+||..|.+.| ++|+|+|+++.+||.+..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t 50 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQT 50 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceee
Confidence 4579999999999999999999999 999999999999998754
No 222
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.20 E-value=5.7e-06 Score=86.65 Aligned_cols=98 Identities=17% Similarity=0.218 Sum_probs=76.4
Q ss_pred CCcEEEECCChHHHHHHHHHHH----CCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLE----NGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNK 105 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~----~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (523)
.++|+|||||+.|+.+|..|.+ .|.+|+++++.+.+. ...++ .+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~------------------------------~~~l~--~~ 227 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM------------------------------GKILP--EY 227 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT------------------------------TTTSC--HH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc------------------------------cccCC--HH
Confidence 3789999999999999999987 478999998864320 01112 56
Q ss_pred HHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEE
Q 009897 106 VMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVIL 185 (523)
Q Consensus 106 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVl 185 (523)
+.+++.+..++.++ .++++++|.+++... +...|++.+++ ++.+|.||+
T Consensus 228 ~~~~~~~~l~~~GV--~v~~~~~V~~i~~~~----------------------~~~~v~l~dG~-------~i~aD~Vv~ 276 (493)
T 1m6i_A 228 LSNWTMEKVRREGV--KVMPNAIVQSVGVSS----------------------GKLLIKLKDGR-------KVETDHIVA 276 (493)
T ss_dssp HHHHHHHHHHTTTC--EEECSCCEEEEEEET----------------------TEEEEEETTSC-------EEEESEEEE
T ss_pred HHHHHHHHHHhcCC--EEEeCCEEEEEEecC----------------------CeEEEEECCCC-------EEECCEEEE
Confidence 77888888888898 899999999998643 34567766664 899999999
Q ss_pred eeeec
Q 009897 186 CIGRY 190 (523)
Q Consensus 186 AtG~~ 190 (523)
|+|..
T Consensus 277 a~G~~ 281 (493)
T 1m6i_A 277 AVGLE 281 (493)
T ss_dssp CCCEE
T ss_pred CCCCC
Confidence 99975
No 223
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.19 E-value=1.2e-06 Score=89.34 Aligned_cols=42 Identities=24% Similarity=0.367 Sum_probs=40.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHC-CCceEEEccCCCCCccccc
Q 009897 30 ERKIAIIGAGVSGLLACKYTLEN-GFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~-g~~v~v~e~~~~~GG~w~~ 71 (523)
.+||+|||||++||++|..|.+. |.+|+|+|+++.+||.+..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 48999999999999999999998 9999999999999999876
No 224
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.19 E-value=1.5e-06 Score=89.13 Aligned_cols=43 Identities=35% Similarity=0.547 Sum_probs=40.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-CceEEEccCCCCCccccc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENG-FKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g-~~v~v~e~~~~~GG~w~~ 71 (523)
+.+||+|||||++||+||..|++.| .+|+|+|+++.+||.+..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t 48 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHS 48 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccc
Confidence 4579999999999999999999999 899999999999998765
No 225
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.17 E-value=1.7e-05 Score=85.82 Aligned_cols=36 Identities=33% Similarity=0.407 Sum_probs=32.6
Q ss_pred CCCcEEEECCChHHHHHHHHHH---H-CCCceEEEccCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTL---E-NGFKPIVFEARSG 64 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~---~-~g~~v~v~e~~~~ 64 (523)
+++||+|||||++||+||..|+ + .|.+|+|+|+...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 3489999999999999999999 6 8999999999764
No 226
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.17 E-value=7.6e-06 Score=84.99 Aligned_cols=97 Identities=19% Similarity=0.190 Sum_probs=77.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. -..++.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-------------------------------~~--~~~~~~~~ 216 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-------------------------------SR--FDQDMRRG 216 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4789999999999999999999999999999976441 00 12567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEE-EeecccCCcceeEEEeCEEEEeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVT-VQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
+.+..++.++ .++++++|.+++... ++...|+ +.++ ++.+|.||+|+|
T Consensus 217 l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~~g--------~i~aD~Vv~a~G 265 (463)
T 4dna_A 217 LHAAMEEKGI--RILCEDIIQSVSADA---------------------DGRRVATTMKHG--------EIVADQVMLALG 265 (463)
T ss_dssp HHHHHHHTTC--EEECSCCEEEEEECT---------------------TSCEEEEESSSC--------EEEESEEEECSC
T ss_pred HHHHHHHCCC--EEECCCEEEEEEEcC---------------------CCEEEEEEcCCC--------eEEeCEEEEeeC
Confidence 8888899999 899999999998764 2335565 4433 389999999999
Q ss_pred ec
Q 009897 189 RY 190 (523)
Q Consensus 189 ~~ 190 (523)
..
T Consensus 266 ~~ 267 (463)
T 4dna_A 266 RM 267 (463)
T ss_dssp EE
T ss_pred cc
Confidence 65
No 227
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.16 E-value=3.6e-06 Score=90.91 Aligned_cols=35 Identities=14% Similarity=0.135 Sum_probs=32.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHC------CCceEEEccCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLEN------GFKPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~------g~~v~v~e~~~~ 64 (523)
++||+|||||++||+||.+|++. |.+|+|+|+...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 48999999999999999999997 999999999654
No 228
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.15 E-value=1.2e-06 Score=91.26 Aligned_cols=43 Identities=28% Similarity=0.466 Sum_probs=39.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC--ceEEEccCCCCCccccc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGF--KPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~--~v~v~e~~~~~GG~w~~ 71 (523)
|.+||+|||||++||+||++|++.|. +|+|+|+++.+||....
T Consensus 1 m~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t 45 (477)
T 3nks_A 1 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRS 45 (477)
T ss_dssp -CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCE
T ss_pred CCceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEE
Confidence 35799999999999999999999999 99999999999997754
No 229
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.15 E-value=2e-06 Score=89.19 Aligned_cols=43 Identities=14% Similarity=0.314 Sum_probs=40.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
..+||+|||||++||+||..|++.|++|+|+|+++.+||.+..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 3489999999999999999999999999999999999998775
No 230
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.14 E-value=1.9e-06 Score=87.20 Aligned_cols=43 Identities=23% Similarity=0.372 Sum_probs=40.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
..+||+|||||++|+++|..|++.|.+|+|+|+++.+||.|..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 4589999999999999999999999999999999999999886
No 231
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.12 E-value=6.9e-06 Score=88.03 Aligned_cols=95 Identities=19% Similarity=0.329 Sum_probs=77.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. ...++.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 233 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM-------------------------------PP--IDYEMAAY 233 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------------------------cc--CCHHHHHH
Confidence 3789999999999999999999999999999876441 11 12567888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... + .|++.++. ++.+|.||+|+|.
T Consensus 234 l~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~--~v~~~~g~-------~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 234 VHEHMKNHDV--ELVFEDGVDALEENG----------------------A--VVRLKSGS-------VIQTDMLILAIGV 280 (588)
T ss_dssp HHHHHHHTTC--EEECSCCEEEEEGGG----------------------T--EEEETTSC-------EEECSEEEECSCE
T ss_pred HHHHHHHcCC--EEEECCeEEEEecCC----------------------C--EEEECCCC-------EEEcCEEEEccCC
Confidence 8888888898 899999999998643 1 36666554 7999999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 281 ~ 281 (588)
T 3ics_A 281 Q 281 (588)
T ss_dssp E
T ss_pred C
Confidence 5
No 232
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.11 E-value=1.1e-05 Score=79.54 Aligned_cols=100 Identities=15% Similarity=0.149 Sum_probs=75.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|.+|+.+|..|.+.|.+|+++++.+.+ ....+..+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~-----------------------------------~~~~~~~~~ 196 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF-----------------------------------RAHEASVKE 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC-----------------------------------CSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCcc-----------------------------------CccHHHHHH
Confidence 478999999999999999999999999999986533 112455667
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... +...|++.... +++..++.+|.||+|+|.
T Consensus 197 l~~~l~~~gv--~v~~~~~v~~i~~~~----------------------~~~~v~~~~~~--~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 197 LMKAHEEGRL--EVLTPYELRRVEGDE----------------------RVRWAVVFHNQ--TQEELALEVDAVLILAGY 250 (335)
T ss_dssp HHHHHHTTSS--EEETTEEEEEEEESS----------------------SEEEEEEEETT--TCCEEEEECSEEEECCCE
T ss_pred HHhccccCCe--EEecCCcceeEccCC----------------------CeeEEEEEECC--CCceEEEecCEEEEeecC
Confidence 7777777788 899999999998742 22356665321 112247899999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 251 ~ 251 (335)
T 2zbw_A 251 I 251 (335)
T ss_dssp E
T ss_pred C
Confidence 5
No 233
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.10 E-value=3.3e-06 Score=88.25 Aligned_cols=49 Identities=31% Similarity=0.336 Sum_probs=42.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-CceEEEccCCCCCccccc--ccCccc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENG-FKPIVFEARSGIGGVWSQ--TIESTK 77 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g-~~v~v~e~~~~~GG~w~~--~~~~~~ 77 (523)
+.+||+|||||++||++|..|.+.| .+|+|+|+++.+||.|.. .+++..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~ 59 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFT 59 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcE
Confidence 4589999999999999999999998 799999999999999986 344443
No 234
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.09 E-value=2.4e-06 Score=86.52 Aligned_cols=42 Identities=33% Similarity=0.527 Sum_probs=39.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
.++|+|||||++|+++|..|.+.|.+|+|+|+++.+||.|..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 479999999999999999999999999999999999999875
No 235
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.08 E-value=5.9e-06 Score=84.06 Aligned_cols=109 Identities=15% Similarity=0.152 Sum_probs=72.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhch
Q 009897 226 NGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSP 305 (523)
Q Consensus 226 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 305 (523)
.||||+|||+|..|+-+|..|.+.+.. .+||++.+++.+...... ...
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~-~~Vtlie~~~~~~~~p~~------------------------~~v------- 48 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPS-IEVTLIEPNETYYTCYMS------------------------NEV------- 48 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTT-SEEEEECSCSSEECSTTH------------------------HHH-------
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcC-CeEEEEeCCCCCCCccCH------------------------HHH-------
Confidence 489999999999999999999887653 569999887653321110 000
Q ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecCceEEecC--cEEEcCCcee
Q 009897 306 LLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSRSFTFCKN--GLVIDGETTP 383 (523)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~i~~~~~~--~v~l~dG~~~ 383 (523)
...... ++ . +... ++.+...+|+++.+.++.++.+ .|++.+|.+
T Consensus 49 ------------~~g~~~-------~~-~------------~~~~-~~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~- 94 (401)
T 3vrd_B 49 ------------IGGDRE-------LA-S------------LRVG-YDGLRAHGIQVVHDSALGIDPDKKLVKTAGGAE- 94 (401)
T ss_dssp ------------HHTSSC-------GG-G------------GEEC-SHHHHHTTCEEECSCEEEEETTTTEEEETTSCE-
T ss_pred ------------hcCCCC-------HH-H------------HhhC-HHHHHHCCCEEEEeEEEEEEccCcEEEecccce-
Confidence 000000 00 0 0000 1223345688888888888864 488899998
Q ss_pred eeccEEEEecCCCCCcc
Q 009897 384 LVTDIVIFATGYKSDEK 400 (523)
Q Consensus 384 ~~~D~VI~ATG~~~~~~ 400 (523)
+++|.+|+|||.+++.+
T Consensus 95 i~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 95 FAYDRCVVAPGIDLLYD 111 (401)
T ss_dssp EECSEEEECCCEEECGG
T ss_pred eecceeeeccCCccccC
Confidence 99999999999987653
No 236
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.07 E-value=9.1e-06 Score=81.41 Aligned_cols=103 Identities=16% Similarity=0.181 Sum_probs=71.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEYL 110 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 110 (523)
++|+|||+|++|+.+|..|.+.|.+|+++++.+.+... . + .....-...+.+++
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~------~----------------~----d~~~~~~~~~~~~l 220 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP------D----------------A----DPSVRLSPYTRQRL 220 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CTTSCCHHHHHHH
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC------C----------------C----CCCccCCHHHHHHH
Confidence 68999999999999999999999999999987644100 0 0 01111124566777
Q ss_pred HHHHHHhC-CCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEE-EeCEEEEeee
Q 009897 111 QAYAAHFN-LFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAY-QVDFVILCIG 188 (523)
Q Consensus 111 ~~~~~~~~-l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~vVlAtG 188 (523)
.+..++.+ + .++++++|.+++... +...|++.+++ .+ .+|.||+|+|
T Consensus 221 ~~~l~~~g~v--~~~~~~~v~~i~~~~----------------------~~~~v~~~~g~-------~~~~~d~vi~a~G 269 (369)
T 3d1c_A 221 GNVIKQGARI--EMNVHYTVKDIDFNN----------------------GQYHISFDSGQ-------SVHTPHEPILATG 269 (369)
T ss_dssp HHHHHTTCCE--EEECSCCEEEEEEET----------------------TEEEEEESSSC-------CEEESSCCEECCC
T ss_pred HHHHhhCCcE--EEecCcEEEEEEecC----------------------CceEEEecCCe-------EeccCCceEEeec
Confidence 77777775 7 788899999997643 34667776654 44 4699999999
Q ss_pred ec
Q 009897 189 RY 190 (523)
Q Consensus 189 ~~ 190 (523)
..
T Consensus 270 ~~ 271 (369)
T 3d1c_A 270 FD 271 (369)
T ss_dssp BC
T ss_pred cC
Confidence 54
No 237
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.07 E-value=1.9e-06 Score=89.19 Aligned_cols=42 Identities=40% Similarity=0.567 Sum_probs=39.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
.+||+|||||++||+||..|++.|++|+|+|+++.+||.+..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 46 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWT 46 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceec
Confidence 479999999999999999999999999999999999998764
No 238
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.06 E-value=2.8e-05 Score=81.89 Aligned_cols=109 Identities=16% Similarity=0.195 Sum_probs=78.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++. .+. ..+ .+++.++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l-------------------------------~~~--d~~~~~~ 255 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILL-------------------------------RGF--DQDMANK 255 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS-------------------------------TTS--CHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccc-------------------------------ccC--CHHHHHH
Confidence 468999999999999999999999999999984 220 111 2678888
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|..+...... ..+...|++.... .++...+.+|.||+|+|.
T Consensus 256 ~~~~l~~~GV--~v~~~~~v~~v~~~~~~------------------~~~~~~v~~~~~~--g~~~~~~~~D~vi~a~G~ 313 (519)
T 3qfa_A 256 IGEHMEEHGI--KFIRQFVPIKVEQIEAG------------------TPGRLRVVAQSTN--SEEIIEGEYNTVMLAIGR 313 (519)
T ss_dssp HHHHHHHTTC--EEEESEEEEEEEEEECC------------------TTCEEEEEEEESS--SSCEEEEEESEEEECSCE
T ss_pred HHHHHHHCCC--EEEeCCeEEEEEEccCC------------------CCceEEEEEEECC--CcEEEEEECCEEEEecCC
Confidence 8888888899 89999888888764300 0134555554322 112346789999999996
Q ss_pred cCCCCCCC
Q 009897 190 YSDLPNTP 197 (523)
Q Consensus 190 ~s~~p~~p 197 (523)
. |+..
T Consensus 314 ~---p~~~ 318 (519)
T 3qfa_A 314 D---ACTR 318 (519)
T ss_dssp E---ESCS
T ss_pred c---ccCC
Confidence 5 5554
No 239
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.06 E-value=3.3e-06 Score=88.34 Aligned_cols=43 Identities=28% Similarity=0.420 Sum_probs=39.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
..+||+|||||++||+||..|.+.|++|+|||+++.+||.+..
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~ 52 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWT 52 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceee
Confidence 4579999999999999999999999999999999999997543
No 240
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.05 E-value=3.1e-06 Score=89.33 Aligned_cols=42 Identities=31% Similarity=0.618 Sum_probs=39.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
.+||+|||||++||+||..|++.|++|+|+|+++.+||....
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t 45 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYT 45 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceee
Confidence 479999999999999999999999999999999999997654
No 241
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.03 E-value=1.3e-05 Score=82.82 Aligned_cols=95 Identities=17% Similarity=0.262 Sum_probs=71.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEYL 110 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 110 (523)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. .-..++.+.+
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~l 196 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVL-------------------------------RR-SFDKEVTDIL 196 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-------------------------------TT-TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc-------------------------------hh-hcCHHHHHHH
Confidence 689999999999999999999999999999976441 10 0125677777
Q ss_pred HHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeeec
Q 009897 111 QAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRY 190 (523)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~ 190 (523)
.+..++. + .+++++.|.+++... .......++. ++.+|.||+|+|..
T Consensus 197 ~~~l~~~-v--~i~~~~~v~~i~~~~-----------------------~v~~v~~~g~-------~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 197 EEKLKKH-V--NLRLQEITMKIEGEE-----------------------RVEKVVTDAG-------EYKAELVILATGIK 243 (449)
T ss_dssp HHHHTTT-S--EEEESCCEEEEECSS-----------------------SCCEEEETTE-------EEECSEEEECSCEE
T ss_pred HHHHHhC-c--EEEeCCeEEEEeccC-----------------------cEEEEEeCCC-------EEECCEEEEeeCCc
Confidence 7777766 6 888999999987542 1222233333 78999999999965
No 242
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.02 E-value=4.2e-06 Score=87.14 Aligned_cols=44 Identities=25% Similarity=0.472 Sum_probs=40.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC--CceEEEccCCCCCccccc
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENG--FKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g--~~v~v~e~~~~~GG~w~~ 71 (523)
|+.+||+|||||++||++|..|.+.| .+|+|+|+++.+||.+..
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~ 47 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVAT 47 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCE
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEE
Confidence 34589999999999999999999999 999999999999997664
No 243
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.97 E-value=2.5e-05 Score=76.99 Aligned_cols=98 Identities=12% Similarity=0.163 Sum_probs=70.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|++|+.+|..|.+.|.+|+++++.+.+ ...+. +
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~-----------------------------------~~~~~---~ 214 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL-----------------------------------RASTI---M 214 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC-----------------------------------CSCHH---H
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc-----------------------------------CCCHH---H
Confidence 378999999999999999999999999999986543 01122 2
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
++...+..++ .++++++|.+++... .+...|++.+.. +++..++.+|.||+|+|.
T Consensus 215 ~~~l~~~~gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~~~--~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 215 QKRAEKNEKI--EILYNTVALEAKGDG---------------------KLLNALRIKNTK--KNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp HHHHHHCTTE--EEECSEEEEEEEESS---------------------SSEEEEEEEETT--TTEEEEEECSEEEECSCE
T ss_pred HHHHHhcCCe--EEeecceeEEEEccc---------------------CcEEEEEEEECC--CCceEEEEeCEEEEEeCC
Confidence 2222333477 788999999998764 123447776632 122347899999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 270 ~ 270 (338)
T 3itj_A 270 T 270 (338)
T ss_dssp E
T ss_pred C
Confidence 5
No 244
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.96 E-value=1.7e-05 Score=79.24 Aligned_cols=100 Identities=17% Similarity=0.200 Sum_probs=72.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|++|+.+|..|.+.|.+|+++++.+.+. ....+.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~~~~ 207 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ-----------------------------------GHGKTAHE 207 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS-----------------------------------SCSHHHHS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC-----------------------------------CCHHHHHH
Confidence 3789999999999999999999999999999865330 11234556
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+.+..++.++ .++++++|.+++... .....|.+... +++...+.+|.||+|+|.
T Consensus 208 l~~~~~~~gv--~i~~~~~v~~i~~~~---------------------~~v~~v~~~~~---~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 208 VERARANGTI--DVYLETEVASIEESN---------------------GVLTRVHLRSS---DGSKWTVEADRLLILIGF 261 (360)
T ss_dssp SHHHHHHTSE--EEESSEEEEEEEEET---------------------TEEEEEEEEET---TCCEEEEECSEEEECCCB
T ss_pred HHHHhhcCce--EEEcCcCHHHhccCC---------------------CceEEEEEEec---CCCeEEEeCCEEEECCCC
Confidence 6666677777 789999999998753 11124555411 122347899999999995
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 262 ~ 262 (360)
T 3ab1_A 262 K 262 (360)
T ss_dssp C
T ss_pred C
Confidence 4
No 245
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.96 E-value=4.9e-05 Score=74.03 Aligned_cols=95 Identities=18% Similarity=0.182 Sum_probs=68.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEYL 110 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 110 (523)
++|+|||+|++|+.+|..|.+.|.+|+++++.+.+. ..+ .+
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~----~~ 185 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-----------------------------------ADQ----VL 185 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-----------------------------------SCH----HH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-----------------------------------ccH----HH
Confidence 689999999999999999999999999999865330 002 22
Q ss_pred HHHHHH-hCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCe-EEEEeecccCCcceeEEEeCEEEEeee
Q 009897 111 QAYAAH-FNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKW-NVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 111 ~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
.+..++ .++ .++++++|.++..+. ++. .|.+.+.. +++..++.+|.||+|+|
T Consensus 186 ~~~l~~~~gv--~v~~~~~v~~i~~~~----------------------~~v~~v~~~~~~--~g~~~~i~~D~vi~a~G 239 (310)
T 1fl2_A 186 QDKLRSLKNV--DIILNAQTTEVKGDG----------------------SKVVGLEYRDRV--SGDIHNIELAGIFVQIG 239 (310)
T ss_dssp HHHHHTCTTE--EEESSEEEEEEEESS----------------------SSEEEEEEEETT--TCCEEEEECSEEEECSC
T ss_pred HHHHhhCCCe--EEecCCceEEEEcCC----------------------CcEEEEEEEECC--CCcEEEEEcCEEEEeeC
Confidence 233333 466 788899999998653 222 46666532 22334789999999999
Q ss_pred ec
Q 009897 189 RY 190 (523)
Q Consensus 189 ~~ 190 (523)
..
T Consensus 240 ~~ 241 (310)
T 1fl2_A 240 LL 241 (310)
T ss_dssp EE
T ss_pred Cc
Confidence 65
No 246
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.95 E-value=3.1e-05 Score=81.16 Aligned_cols=100 Identities=16% Similarity=0.205 Sum_probs=73.8
Q ss_pred CcEEEECCChHHHHHHHHHHHC--------------CCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLEN--------------GFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSV 96 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~--------------g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (523)
..++|||||+.|+.+|..|.+. ..+|+++|..+.+.
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------ 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------ 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS------------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc------------------------------
Confidence 3699999999999999988753 36899999977651
Q ss_pred CCCCCChhHHHHHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCccee
Q 009897 97 TETFPDHNKVMEYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATE 176 (523)
Q Consensus 97 ~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 176 (523)
+.+ .+++.+++++..++.|+ .++++++|.+++.+. ..+.....+ +....+
T Consensus 268 -~~~--~~~~~~~~~~~L~~~GV--~v~~~~~v~~v~~~~------------------------~~~~~~~~d-g~~~~~ 317 (502)
T 4g6h_A 268 -NMF--EKKLSSYAQSHLENTSI--KVHLRTAVAKVEEKQ------------------------LLAKTKHED-GKITEE 317 (502)
T ss_dssp -TTS--CHHHHHHHHHHHHHTTC--EEETTEEEEEECSSE------------------------EEEEEECTT-SCEEEE
T ss_pred -cCC--CHHHHHHHHHHHHhcce--eeecCceEEEEeCCc------------------------eEEEEEecC-ccccee
Confidence 112 26788999999999999 899999999987543 223222111 111224
Q ss_pred EEEeCEEEEeeeec
Q 009897 177 AYQVDFVILCIGRY 190 (523)
Q Consensus 177 ~~~~d~vVlAtG~~ 190 (523)
++.+|.||.|+|..
T Consensus 318 ~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 318 TIPYGTLIWATGNK 331 (502)
T ss_dssp EEECSEEEECCCEE
T ss_pred eeccCEEEEccCCc
Confidence 78999999999976
No 247
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.94 E-value=5.9e-06 Score=86.75 Aligned_cols=42 Identities=40% Similarity=0.600 Sum_probs=39.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
.+||+|||||++||++|..|.+.|++|+|+|+++.+||.+..
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 54 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRS 54 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceee
Confidence 479999999999999999999999999999999999998765
No 248
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.93 E-value=6.1e-06 Score=82.96 Aligned_cols=41 Identities=27% Similarity=0.337 Sum_probs=38.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
+||+|||||++|+++|..|.+.|.+|+|+|+++.+||.+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 58999999999999999999999999999999999998765
No 249
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.93 E-value=1.9e-05 Score=77.60 Aligned_cols=97 Identities=16% Similarity=0.212 Sum_probs=67.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|++|+.+|..|.+.|.+|+++++.+.+. ....+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~--- 193 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR-----------------------------------ANKVA--- 193 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC-----------------------------------cchHH---
Confidence 3789999999999999999999999999999865330 01222
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
.+...++.++ .++++++|.++..+. ....|.+.+.. +++..++.+|.||+|+|.
T Consensus 194 ~~~l~~~~gv--~i~~~~~v~~i~~~~----------------------~v~~v~~~~~~--~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 194 QARAFANPKM--KFIWDTAVEEIQGAD----------------------SVSGVKLRNLK--TGEVSELATDGVFIFIGH 247 (325)
T ss_dssp HHHHHTCTTE--EEECSEEEEEEEESS----------------------SEEEEEEEETT--TCCEEEEECSEEEECSCE
T ss_pred HHHHHhcCCc--eEecCCceEEEccCC----------------------cEEEEEEEECC--CCcEEEEEcCEEEEccCC
Confidence 2222233466 788899999998642 22356665321 122347899999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 248 ~ 248 (325)
T 2q7v_A 248 V 248 (325)
T ss_dssp E
T ss_pred C
Confidence 5
No 250
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.92 E-value=3.7e-05 Score=79.11 Aligned_cols=109 Identities=15% Similarity=0.125 Sum_probs=71.6
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHH
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLL 307 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (523)
++|+|||+|.+|+.+|..|++....+.+||++.+.+.+...... .
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~-----------------------------------~ 49 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSN-----------------------------------P 49 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGH-----------------------------------H
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCc-----------------------------------c
Confidence 68999999999999999999821112459999988753221110 0
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecCceEEecC--cEEEcCCceeee
Q 009897 308 WLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSRSFTFCKN--GLVIDGETTPLV 385 (523)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~i~~~~~~--~v~l~dG~~~~~ 385 (523)
+... ... ....+...+.+.++..+|+++.+.+..++.+ .|.+++|++ +.
T Consensus 50 ~~~~--------g~~--------------------~~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~-i~ 100 (437)
T 3sx6_A 50 WVGV--------GWK--------------------ERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNT-VH 100 (437)
T ss_dssp HHHH--------TSS--------------------CHHHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCE-EE
T ss_pred cccc--------Ccc--------------------CHHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCE-EE
Confidence 0000 000 0001122334555566788888788888764 488889988 99
Q ss_pred ccEEEEecCCCCCcc
Q 009897 386 TDIVIFATGYKSDEK 400 (523)
Q Consensus 386 ~D~VI~ATG~~~~~~ 400 (523)
+|.||+|||.++..+
T Consensus 101 ~d~lviAtG~~~~~~ 115 (437)
T 3sx6_A 101 YDYLMIATGPKLAFE 115 (437)
T ss_dssp CSEEEECCCCEECGG
T ss_pred CCEEEECCCCCcCcc
Confidence 999999999987643
No 251
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.90 E-value=5.5e-06 Score=85.20 Aligned_cols=36 Identities=28% Similarity=0.546 Sum_probs=32.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.|.+||+||||||+|+++|..|++.|++|+|||+.+
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 366899999999999999999999999999999876
No 252
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.90 E-value=3.4e-05 Score=80.17 Aligned_cols=105 Identities=23% Similarity=0.375 Sum_probs=74.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHH
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVME 108 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (523)
..++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ..+ ..+++.+
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~~-~d~~~~~ 218 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL-------------------------------ITL-EDQDIVN 218 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TTS-CCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC-------------------------------CCC-CCHHHHH
Confidence 34789999999999999999999999999999976441 001 0245555
Q ss_pred HHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeee
Q 009897 109 YLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIG 188 (523)
Q Consensus 109 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG 188 (523)
.+++..+ + .++++++|.+++... ++...|++.+. +++..++.+|.||+|+|
T Consensus 219 ~l~~~l~---v--~i~~~~~v~~i~~~~---------------------~~~v~v~~~~~---~G~~~~i~~D~vi~a~G 269 (466)
T 3l8k_A 219 TLLSILK---L--NIKFNSPVTEVKKIK---------------------DDEYEVIYSTK---DGSKKSIFTNSVVLAAG 269 (466)
T ss_dssp HHHHHHC---C--CEECSCCEEEEEEEE---------------------TTEEEEEECCT---TSCCEEEEESCEEECCC
T ss_pred HHHhcCE---E--EEEECCEEEEEEEcC---------------------CCcEEEEEEec---CCceEEEEcCEEEECcC
Confidence 5554433 5 788999999998742 13455666521 11234789999999999
Q ss_pred ecCCCCCCC
Q 009897 189 RYSDLPNTP 197 (523)
Q Consensus 189 ~~s~~p~~p 197 (523)
.. |+..
T Consensus 270 ~~---p~~~ 275 (466)
T 3l8k_A 270 RR---PVIP 275 (466)
T ss_dssp EE---ECCC
T ss_pred CC---cccc
Confidence 65 5544
No 253
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.90 E-value=6.4e-05 Score=73.64 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=68.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+ ...+.+.+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~-----------------------------------~~~~~l~~- 198 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKY-----------------------------------MCENAYVQ- 198 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSC-----------------------------------CSCHHHHH-
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCcc-----------------------------------CCCHHHHH-
Confidence 378999999999999999999999999999986432 01122333
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
.+.+.++ .++++++|.++.... .....|.+.+.. +++..++.+|.||+|+|.
T Consensus 199 ---~l~~~gv--~i~~~~~v~~i~~~~---------------------~~v~~v~~~~~~--~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 199 ---EIKKRNI--PYIMNAQVTEIVGDG---------------------KKVTGVKYKDRT--TGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp ---HHHHTTC--CEECSEEEEEEEESS---------------------SSEEEEEEEETT--TCCEEEECCSEEEECCCE
T ss_pred ---HHhcCCc--EEEcCCeEEEEecCC---------------------ceEEEEEEEEcC--CCceEEEecCEEEEeeCC
Confidence 3346688 899999999998753 112345555321 122346899999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 251 ~ 251 (319)
T 3cty_A 251 I 251 (319)
T ss_dssp E
T ss_pred c
Confidence 5
No 254
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.89 E-value=2.2e-05 Score=76.55 Aligned_cols=98 Identities=13% Similarity=0.172 Sum_probs=67.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ..+.+.
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~-- 185 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-----------------------------------CAPITL-- 185 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-----------------------------------SCHHHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-----------------------------------CCHHHH--
Confidence 4789999999999999999999999999999865330 012222
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+...++.++ .+.++++|.++.... ++...|.+.+.. +++..++.+|.||+|+|.
T Consensus 186 -~~l~~~~gv--~v~~~~~v~~i~~~~---------------------~~v~~v~~~~~~--~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 186 -EHAKNNDKI--EFLTPYVVEEIKGDA---------------------SGVSSLSIKNTA--TNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp -HHHHTCTTE--EEETTEEEEEEEEET---------------------TEEEEEEEEETT--TCCEEEEECSEEEECSCE
T ss_pred -HHHhhCCCe--EEEeCCEEEEEECCC---------------------CcEeEEEEEecC--CCceEEEecCEEEEEecC
Confidence 222223566 778899999998753 122246665321 122347899999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 240 ~ 240 (311)
T 2q0l_A 240 D 240 (311)
T ss_dssp E
T ss_pred c
Confidence 5
No 255
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.88 E-value=6.5e-06 Score=86.28 Aligned_cols=42 Identities=31% Similarity=0.460 Sum_probs=39.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
.+||+|||||++||++|..|.+.|++|+|+|+++.+||.+..
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~ 74 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRT 74 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceee
Confidence 479999999999999999999999999999999999997653
No 256
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.88 E-value=2.7e-05 Score=76.73 Aligned_cols=100 Identities=14% Similarity=0.207 Sum_probs=68.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|..|+.+|..|.+.|.+|+++++++.+. ..+.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~--- 200 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR-----------------------------------ASKIM--- 200 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC-----------------------------------ccHHH---
Confidence 4789999999999999999999999999999865330 01111
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
.++..++.++ .+.++++|.++.... + ......|.+.+.. +++..++.+|.||+|+|.
T Consensus 201 ~~~~~~~~gv--~i~~~~~v~~i~~~~--~-----------------~~~v~~v~~~~~~--~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 201 QQRALSNPKI--DVIWNSSVVEAYGDG--E-----------------RDVLGGLKVKNVV--TGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp HHHHHTCTTE--EEECSEEEEEEEESS--S-----------------SSSEEEEEEEETT--TCCEEEEECSEEEECSCE
T ss_pred HHHHHhCCCe--eEecCCceEEEeCCC--C-----------------ccceeeEEEEecC--CCceEEEecCEEEEEeCC
Confidence 1233345566 788899999998753 0 0011236665421 122347899999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 258 ~ 258 (333)
T 1vdc_A 258 E 258 (333)
T ss_dssp E
T ss_pred c
Confidence 5
No 257
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.85 E-value=3.9e-05 Score=74.94 Aligned_cols=97 Identities=20% Similarity=0.221 Sum_probs=70.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ..+ .+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~-----------------------------------~~~---~~ 195 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-----------------------------------AQP---IY 195 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC-----------------------------------SCH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC-----------------------------------cCH---HH
Confidence 3789999999999999999999999999999865430 112 23
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+++..++.++ .+.++++|.++.... ....|++.+.. +++...+.+|.||+|+|.
T Consensus 196 ~~~~~~~~gv--~~~~~~~v~~i~~~~----------------------~~~~v~~~~~~--~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 196 VETVKKKPNV--EFVLNSVVKEIKGDK----------------------VVKQVVVENLK--TGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp HHHHHTCTTE--EEECSEEEEEEEESS----------------------SEEEEEEEETT--TCCEEEEECSEEEECCCE
T ss_pred HHHHHhCCCc--EEEeCCEEEEEeccC----------------------ceeEEEEEECC--CCceEEEEcCEEEEEECC
Confidence 3444444566 788899999998753 33457776522 123347899999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 250 ~ 250 (323)
T 3f8d_A 250 D 250 (323)
T ss_dssp E
T ss_pred C
Confidence 5
No 258
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.84 E-value=1.8e-05 Score=82.81 Aligned_cols=41 Identities=37% Similarity=0.568 Sum_probs=38.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
+||+|||||++||+||..|.+.|++|+|+|+++.+||....
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t 80 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWS 80 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCccee
Confidence 68999999999999999999999999999999999997654
No 259
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.83 E-value=0.00015 Score=77.68 Aligned_cols=104 Identities=16% Similarity=0.126 Sum_probs=73.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||||+.|+.+|..|++.|.+|+++++. .+. +. -.+++.++
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l-------------------------------~~--~d~~~~~~ 331 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILL-------------------------------RG--FDQQMAEK 331 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS-------------------------------TT--SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCc-------------------------------Cc--CCHHHHHH
Confidence 368999999999999999999999999999985 220 11 12567778
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeC-----CCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEE
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRL-----VPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVI 184 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vV 184 (523)
+.+..++.++ .+++++.+..+... .. + ..+...++..... ++...+.+|.||
T Consensus 332 ~~~~l~~~gv--~i~~~~~v~~v~~~~~~~~~~-~-----------------~~~~~~v~~~~~~---g~~~~~~~D~vi 388 (598)
T 2x8g_A 332 VGDYMENHGV--KFAKLCVPDEIKQLKVVDTEN-N-----------------KPGLLLVKGHYTD---GKKFEEEFETVI 388 (598)
T ss_dssp HHHHHHHTTC--EEEETEEEEEEEEEECCBTTT-T-----------------BCCEEEEEEEETT---SCEEEEEESEEE
T ss_pred HHHHHHhCCC--EEEECCeEEEEEecccccccc-C-----------------CCceEEEEEEeCC---CcEEeccCCEEE
Confidence 8888888898 89999888888653 10 0 0133445432211 122245699999
Q ss_pred Eeeeec
Q 009897 185 LCIGRY 190 (523)
Q Consensus 185 lAtG~~ 190 (523)
+|+|..
T Consensus 389 ~a~G~~ 394 (598)
T 2x8g_A 389 FAVGRE 394 (598)
T ss_dssp ECSCEE
T ss_pred EEeCCc
Confidence 999965
No 260
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.83 E-value=2.2e-05 Score=77.68 Aligned_cols=97 Identities=15% Similarity=0.214 Sum_probs=67.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++++.+. . .+.+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~----------------------------------~-~~~~~-- 197 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR----------------------------------A-SKIML-- 197 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS----------------------------------S-CTTHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC----------------------------------c-cHHHH--
Confidence 4789999999999999999999999999999865330 0 01111
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
++..++.++ .+.++++|.+++... +...|.+.+.. +++..++.+|.||+|+|.
T Consensus 198 -~~~~~~~gV--~v~~~~~v~~i~~~~----------------------~~~~v~~~~~~--~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 198 -DRARNNDKI--RFLTNHTVVAVDGDT----------------------TVTGLRVRDTN--TGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp -HHHHHCTTE--EEECSEEEEEEECSS----------------------SCCEEEEEEET--TSCCEEECCSCEEECSCE
T ss_pred -HHHhccCCc--EEEeCceeEEEecCC----------------------cEeEEEEEEcC--CCceEEeecCEEEEccCC
Confidence 123345677 788899999998643 22345555321 122237899999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 251 ~ 251 (335)
T 2a87_A 251 E 251 (335)
T ss_dssp E
T ss_pred c
Confidence 5
No 261
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.82 E-value=1.6e-05 Score=81.70 Aligned_cols=42 Identities=21% Similarity=0.319 Sum_probs=39.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
.+||+|||||++|+++|..|.+.|.+|+|+|+++.+||.+..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 489999999999999999999999999999999999998875
No 262
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.81 E-value=1.1e-05 Score=81.67 Aligned_cols=66 Identities=15% Similarity=0.130 Sum_probs=52.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|++.|.+|+++|+.+.+. .. .-.+++.++
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l-------------------------------~~-~~~~~~~~~ 193 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL-------------------------------ER-QLDRDGGLF 193 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC-------------------------------TT-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc-------------------------------hh-hcCHHHHHH
Confidence 3789999999999999999999999999999976541 00 012567788
Q ss_pred HHHHHHHhCCCCceEeccEE
Q 009897 110 LQAYAAHFNLFPSIKFDTKV 129 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V 129 (523)
+.+..++.++ .++++++|
T Consensus 194 ~~~~l~~~gV--~~~~~~~v 211 (385)
T 3klj_A 194 LKDKLDRLGI--KIYTNSNF 211 (385)
T ss_dssp HHHHHHTTTC--EEECSCCG
T ss_pred HHHHHHhCCC--EEEeCCEE
Confidence 8888888887 67777655
No 263
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.80 E-value=9.6e-05 Score=72.50 Aligned_cols=96 Identities=14% Similarity=0.108 Sum_probs=71.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+ ...+...
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~-----------------------------------~~~~~~~-- 196 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKF-----------------------------------RAHEHSV-- 196 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSC-----------------------------------SSCHHHH--
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcC-----------------------------------CccHHHH--
Confidence 378999999999999999999999999999986533 1111111
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+..++.++ .++++++|.++.... +...|++.+.. +++..++.+|.||+|+|.
T Consensus 197 --~~l~~~gv--~~~~~~~v~~i~~~~----------------------~~~~v~~~~~~--~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 197 --ENLHASKV--NVLTPFVPAELIGED----------------------KIEQLVLEEVK--GDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp --HHHHHSSC--EEETTEEEEEEECSS----------------------SCCEEEEEETT--SCCEEEEECSEEEECCCE
T ss_pred --HHHhcCCe--EEEeCceeeEEecCC----------------------ceEEEEEEecC--CCceEEEECCEEEEeecc
Confidence 22456777 788999999998754 34567777643 223347899999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 249 ~ 249 (332)
T 3lzw_A 249 V 249 (332)
T ss_dssp E
T ss_pred C
Confidence 5
No 264
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.76 E-value=3.9e-05 Score=78.78 Aligned_cols=108 Identities=15% Similarity=0.052 Sum_probs=71.4
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhchHH
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLSPLL 307 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (523)
++|+|||+|..|+.+|..|++.+. +.+||++.+.+........ .
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~~~~~~~-----------------------------------~ 46 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFTPAF-----------------------------------P 46 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECGGGH-----------------------------------H
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCCCcCCCc-----------------------------------c
Confidence 689999999999999999999432 2569999998753211100 0
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecCceEEecC--cEEEcCCceeee
Q 009897 308 WLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSRSFTFCKN--GLVIDGETTPLV 385 (523)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~i~~~~~~--~v~l~dG~~~~~ 385 (523)
+. ...... + ..+...+.+.++..+|+++.+.+..++.+ .|.+++|++ +.
T Consensus 47 ~~--------~~g~~~-------~-------------~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~-i~ 97 (430)
T 3h28_A 47 HL--------AMGWRK-------F-------------EDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKK-IE 97 (430)
T ss_dssp HH--------HHTCSC-------G-------------GGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCE-EE
T ss_pred hh--------ccCccC-------H-------------HHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcE-EE
Confidence 00 000000 0 00112233445556788888888888765 488889988 99
Q ss_pred ccEEEEecCCCCCcc
Q 009897 386 TDIVIFATGYKSDEK 400 (523)
Q Consensus 386 ~D~VI~ATG~~~~~~ 400 (523)
+|.||+|||.+++.+
T Consensus 98 ~d~liiAtG~~~~~p 112 (430)
T 3h28_A 98 YDYLVIATGPKLVFG 112 (430)
T ss_dssp CSEEEECCCCEEECC
T ss_pred CCEEEEcCCcccccC
Confidence 999999999987643
No 265
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.75 E-value=2.6e-05 Score=81.16 Aligned_cols=50 Identities=28% Similarity=0.535 Sum_probs=42.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccCCCCCccccc-ccCccccc
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEARSGIGGVWSQ-TIESTKLQ 79 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~~~~GG~w~~-~~~~~~~~ 79 (523)
.+||+|||||++||++|..|.+.|+ +|+|+|+++.+||.+.. ..++..++
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d 55 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVE 55 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEe
Confidence 4799999999999999999999999 89999999999999876 33444333
No 266
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.73 E-value=8.3e-05 Score=75.72 Aligned_cols=107 Identities=11% Similarity=0.060 Sum_probs=70.5
Q ss_pred CEEEEEcCCCCHHHHHHHHHH---hcCCccCEEEEEeeceeEecCccCCCcchhhHHHHHHHhcCCCchhHHHHHhhhhc
Q 009897 228 KRVTVIGFQKSAVDVAAEVAN---RNGVRYPCTLLFKTVHWMVPDYFLWSTFRSLNRWTELIIHNPGEGFFSWLLALSLS 304 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~---~~~~~~~Vt~~~r~~~~~~p~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 304 (523)
++|+|||+|.+|+.+|..|++ .+ .+|+++.+.+.+.......
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g---~~V~vie~~~~~~~~~~~~-------------------------------- 46 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSK---ADVKVINKSRFSYFRPALP-------------------------------- 46 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGG---SEEEEEESSSEEEECCSSC--------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCC---CeEEEEeCCCCceeccchh--------------------------------
Confidence 589999999999999999998 44 4599999987532211100
Q ss_pred hHHHHHHHHHHHHHHhcCCcccCCCCCCCcccccccCcceeecCcchhhhccCCCEEEEecCceEEecC--cEEEcCCc-
Q 009897 305 PLLWLSSKVVESCLKWTFPLKKYNMIPGHSFLNQISSCMFTVLPRNFYDRVQGGGLSLMKSRSFTFCKN--GLVIDGET- 381 (523)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~i~~~~~~--~v~l~dG~- 381 (523)
....+... ...+...+.+.+++.+++++.+.+..++.+ .|.+.+|+
T Consensus 47 -------------------~~~~~~~~------------~~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~ 95 (409)
T 3h8l_A 47 -------------------HVAIGVRD------------VDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDG 95 (409)
T ss_dssp -------------------CCCSSCCC------------CCCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTS
T ss_pred -------------------hcccCCcC------------HHHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCc
Confidence 00000000 011223344556666788888888888755 58887765
Q ss_pred --eeeeccEEEEecCCCCCcc
Q 009897 382 --TPLVTDIVIFATGYKSDEK 400 (523)
Q Consensus 382 --~~~~~D~VI~ATG~~~~~~ 400 (523)
..+++|.||+|||.++..+
T Consensus 96 ~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 96 SMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp CEEEEECSEEEECCCCEECGG
T ss_pred ccceeeCCEEEECCCCCcCcc
Confidence 1378999999999987653
No 267
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.73 E-value=2.3e-05 Score=80.96 Aligned_cols=42 Identities=19% Similarity=0.296 Sum_probs=39.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
.+||+|||+|++|+++|..|++.|.+|+++|+++.+||.+..
T Consensus 20 ~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s 61 (475)
T 3p1w_A 20 HYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETAS 61 (475)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccc
Confidence 389999999999999999999999999999999999998775
No 268
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.71 E-value=5e-05 Score=73.27 Aligned_cols=33 Identities=15% Similarity=0.088 Sum_probs=29.1
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeec
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTV 263 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~ 263 (523)
.+|+|||+|.+|+.+|..|++.+. +|+++.+.+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~ 35 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARK---NILLVDAGE 35 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC---CEEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCC
Confidence 479999999999999999999875 499999754
No 269
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.71 E-value=6.5e-05 Score=73.15 Aligned_cols=97 Identities=13% Similarity=0.150 Sum_probs=69.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+ .... .+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~-----------------------------------~~~~---~~ 188 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF-----------------------------------RAAP---ST 188 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC-----------------------------------BSCH---HH
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC-----------------------------------CCCH---HH
Confidence 378999999999999999999999999999986533 0011 23
Q ss_pred HHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeee
Q 009897 110 LQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGR 189 (523)
Q Consensus 110 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~ 189 (523)
+++..++.++ .++++++|.++.... .....|++... +++..++.+|.||+|+|.
T Consensus 189 ~~~~~~~~gv--~~~~~~~v~~i~~~~---------------------~~~~~v~~~~~---~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 189 VEKVKKNEKI--ELITSASVDEVYGDK---------------------MGVAGVKVKLK---DGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HHHHHHCTTE--EEECSCEEEEEEEET---------------------TEEEEEEEECT---TSCEEEECCSCEEECSCE
T ss_pred HHHHHhcCCe--EEEeCcEEEEEEcCC---------------------CcEEEEEEEcC---CCCeEEeecCeEEEEEcC
Confidence 3444456677 788899999998753 12233555511 123347899999999996
Q ss_pred c
Q 009897 190 Y 190 (523)
Q Consensus 190 ~ 190 (523)
.
T Consensus 243 ~ 243 (315)
T 3r9u_A 243 N 243 (315)
T ss_dssp E
T ss_pred C
Confidence 5
No 270
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.69 E-value=3.3e-05 Score=77.31 Aligned_cols=34 Identities=18% Similarity=0.472 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.+||+|||||++|+++|++|+++|.+|+|+|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 4799999999999999999999999999999865
No 271
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.68 E-value=0.00013 Score=76.92 Aligned_cols=96 Identities=19% Similarity=0.199 Sum_probs=68.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHH
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEY 109 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 109 (523)
.++|+|||+|.+|+.+|..|++.|.+|+++++.+.+. .. ++
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~----------------------------------~~-----~~ 395 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------------------------AD-----QV 395 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC----------------------------------SC-----HH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC----------------------------------cC-----HH
Confidence 3789999999999999999999999999999865330 00 22
Q ss_pred HHHHHHH-hCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCe-EEEEeecccCCcceeEEEeCEEEEee
Q 009897 110 LQAYAAH-FNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKW-NVTVQEARNVSSATEAYQVDFVILCI 187 (523)
Q Consensus 110 l~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~d~vVlAt 187 (523)
+.+..++ .++ .+++++.|+++..+. ++. .|.+.+.. +++..++.+|.||+|+
T Consensus 396 l~~~l~~~~gV--~v~~~~~v~~i~~~~----------------------~~v~~v~~~~~~--~g~~~~i~~D~vi~a~ 449 (521)
T 1hyu_A 396 LQDKVRSLKNV--DIILNAQTTEVKGDG----------------------SKVVGLEYRDRV--SGDIHSVALAGIFVQI 449 (521)
T ss_dssp HHHHHTTCTTE--EEECSEEEEEEEECS----------------------SSEEEEEEEETT--TCCEEEEECSEEEECC
T ss_pred HHHHHhcCCCc--EEEeCCEEEEEEcCC----------------------CcEEEEEEEeCC--CCceEEEEcCEEEECc
Confidence 3333333 356 788899999998653 223 46666532 2334578999999999
Q ss_pred eec
Q 009897 188 GRY 190 (523)
Q Consensus 188 G~~ 190 (523)
|..
T Consensus 450 G~~ 452 (521)
T 1hyu_A 450 GLL 452 (521)
T ss_dssp CEE
T ss_pred CCC
Confidence 965
No 272
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.66 E-value=0.00011 Score=71.74 Aligned_cols=33 Identities=18% Similarity=0.349 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|+|||+|..|+.+|..|.+.|.+|+|+++..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 789999999999999999999999999999853
No 273
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.66 E-value=3.6e-05 Score=83.58 Aligned_cols=43 Identities=37% Similarity=0.555 Sum_probs=39.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
..++|+|||||++||++|..|.+.|++|+|+|+.+.+||.+..
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~ 148 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 148 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCE
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 3489999999999999999999999999999999999998664
No 274
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.63 E-value=4.4e-05 Score=84.58 Aligned_cols=43 Identities=37% Similarity=0.555 Sum_probs=39.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
..++|+|||||++||++|..|.+.|++|+|||+.+.+||.+..
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 319 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 319 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceee
Confidence 3589999999999999999999999999999999999997653
No 275
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.62 E-value=0.00015 Score=79.01 Aligned_cols=99 Identities=12% Similarity=0.117 Sum_probs=71.4
Q ss_pred CCcEEEEC--CChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHH
Q 009897 30 ERKIAIIG--AGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVM 107 (523)
Q Consensus 30 ~~~v~IIG--aG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (523)
.++|+||| +|..|+.+|..|.+.|.+|+++++.+.+.... ......
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~--------------------------------~~~~~~ 570 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT--------------------------------NNTFEV 570 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG--------------------------------GGGTCH
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc--------------------------------ccchhH
Confidence 36799999 99999999999999999999999876542110 002234
Q ss_pred HHHHHHHHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEee
Q 009897 108 EYLQAYAAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCI 187 (523)
Q Consensus 108 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAt 187 (523)
..+.+..++.++ .++.+++|++++... -.+..... ++.+++.+|.||+|+
T Consensus 571 ~~l~~~l~~~GV--~i~~~~~V~~i~~~~------------------------~~v~~~~~----~~~~~i~aD~VV~A~ 620 (690)
T 3k30_A 571 NRIQRRLIENGV--ARVTDHAVVAVGAGG------------------------VTVRDTYA----SIERELECDAVVMVT 620 (690)
T ss_dssp HHHHHHHHHTTC--EEEESEEEEEEETTE------------------------EEEEETTT----CCEEEEECSEEEEES
T ss_pred HHHHHHHHHCCC--EEEcCcEEEEEECCe------------------------EEEEEccC----CeEEEEECCEEEECC
Confidence 566677778888 899999999998532 23332111 112378999999999
Q ss_pred eec
Q 009897 188 GRY 190 (523)
Q Consensus 188 G~~ 190 (523)
|..
T Consensus 621 G~~ 623 (690)
T 3k30_A 621 ARL 623 (690)
T ss_dssp CEE
T ss_pred CCC
Confidence 965
No 276
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.61 E-value=0.00017 Score=74.83 Aligned_cols=36 Identities=14% Similarity=0.187 Sum_probs=32.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGI 65 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~ 65 (523)
.++|+|||+|.+|+-+|..|.+.|.+|+++++++.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 488999999999999999999999999999987543
No 277
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.50 E-value=6.7e-05 Score=80.66 Aligned_cols=40 Identities=20% Similarity=0.346 Sum_probs=37.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccc
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVW 69 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w 69 (523)
.+||+|||||++|+++|..|++.|++|+|+|+.+..||.+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 4799999999999999999999999999999998888755
No 278
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.50 E-value=2.4e-05 Score=84.41 Aligned_cols=36 Identities=25% Similarity=0.367 Sum_probs=34.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--------CceEEEccCC-CC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENG--------FKPIVFEARS-GI 65 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g--------~~v~v~e~~~-~~ 65 (523)
.++|+|||||++||++|+.|.+.| ++|+|||+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 478999999999999999999988 9999999998 88
No 279
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.50 E-value=4.4e-05 Score=75.94 Aligned_cols=34 Identities=29% Similarity=0.390 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCC------CceEEEccCCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENG------FKPIVFEARSG 64 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g------~~v~v~e~~~~ 64 (523)
+||+|||||++|+++|.+|+++| .+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 48999999999999999999998 89999999763
No 280
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.45 E-value=0.00023 Score=73.35 Aligned_cols=34 Identities=6% Similarity=-0.098 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCc-eEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFK-PIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~-v~v~e~~~ 63 (523)
.++|+|||+|.+|+-+|..|.+.+.+ |+++++++
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 47899999999999999999999998 99999864
No 281
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.41 E-value=0.00016 Score=71.63 Aligned_cols=33 Identities=21% Similarity=0.219 Sum_probs=29.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.++|+|||+|.+|+.+|..|.+.+ +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 379999999999999999999998 699998863
No 282
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.35 E-value=0.00018 Score=71.62 Aligned_cols=36 Identities=28% Similarity=0.386 Sum_probs=33.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIG 66 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~G 66 (523)
+||+|||||++|+.||..|++.|.+|+|+|+++..+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC
Confidence 689999999999999999999999999999977543
No 283
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.31 E-value=0.00047 Score=77.96 Aligned_cols=98 Identities=18% Similarity=0.143 Sum_probs=70.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHHHHH
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVMEYL 110 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 110 (523)
++|+|||+|+.|+.+|..|.+.|.+|+|+|+.+.+ . ..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~-----------------------------------~--~~----- 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSI-----------------------------------S--AA----- 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSC-----------------------------------C--HH-----
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCcc-----------------------------------c--hh-----
Confidence 78999999999999999999999999999986533 0 01
Q ss_pred HHHHHHhCCCCceEeccEEEEEEeC-CCCCcccccccccCCCCCCCCCCCCeEEEEee--cccCCcceeEEEeCEEEEee
Q 009897 111 QAYAAHFNLFPSIKFDTKVTSIDRL-VPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQE--ARNVSSATEAYQVDFVILCI 187 (523)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~V~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~d~vVlAt 187 (523)
.+.+++.++ .+++++.|.++... . +....|++.+ ....+++..++.+|.||+|+
T Consensus 323 ~~~l~~~GV--~v~~~~~v~~i~~~~~---------------------~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~ 379 (965)
T 2gag_A 323 AAQAVADGV--QVISGSVVVDTEADEN---------------------GELSAIVVAELDEARELGGTQRFEADVLAVAG 379 (965)
T ss_dssp HHHHHHTTC--CEEETEEEEEEEECTT---------------------SCEEEEEEEEECTTCCEEEEEEEECSEEEEEC
T ss_pred HHHHHhCCe--EEEeCCEeEEEeccCC---------------------CCEEEEEEEeccccCCCCceEEEEcCEEEECC
Confidence 234567788 89999999999874 2 1223455554 10000122479999999999
Q ss_pred eecCCCCCC
Q 009897 188 GRYSDLPNT 196 (523)
Q Consensus 188 G~~s~~p~~ 196 (523)
|.. |+.
T Consensus 380 G~~---P~~ 385 (965)
T 2gag_A 380 GFN---PVV 385 (965)
T ss_dssp CEE---ECC
T ss_pred CcC---cCh
Confidence 964 554
No 284
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.30 E-value=0.00071 Score=71.42 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=33.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
.++|+|||+|.+|+.+|..|++.+.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 48999999999999999999999999999999875
No 285
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.22 E-value=0.0015 Score=67.37 Aligned_cols=36 Identities=19% Similarity=0.404 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--------------------CC-ceEEEccCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLEN--------------------GF-KPIVFEARSGI 65 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~--------------------g~-~v~v~e~~~~~ 65 (523)
.++|+|||+|..|+.+|..|.+. |. +|+|++++..+
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 47899999999999999999874 55 89999987644
No 286
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.20 E-value=0.0006 Score=66.22 Aligned_cols=31 Identities=13% Similarity=0.189 Sum_probs=27.1
Q ss_pred EEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEee
Q 009897 229 RVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKT 262 (523)
Q Consensus 229 ~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~ 262 (523)
.|+|||+|+.|+..|..+++.+. +|+++.+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~---~v~lie~~ 38 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARK---QIALFDNN 38 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC---CEEEEECS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC---CEEEEeCC
Confidence 59999999999999999998764 49999875
No 287
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.19 E-value=0.0011 Score=64.38 Aligned_cols=36 Identities=17% Similarity=0.299 Sum_probs=32.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGI 65 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~ 65 (523)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 378999999999999999999999999999987543
No 288
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.15 E-value=0.00067 Score=73.71 Aligned_cols=29 Identities=31% Similarity=0.391 Sum_probs=25.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEE
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIV 58 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v 58 (523)
.++|+|||||+.|+.+|..|.+.|.+|++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 47999999999999999999999877654
No 289
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.13 E-value=0.0032 Score=65.01 Aligned_cols=35 Identities=17% Similarity=0.211 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHH--------------------HCCC-ceEEEccCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTL--------------------ENGF-KPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~--------------------~~g~-~v~v~e~~~~ 64 (523)
.++|+|||+|..|+.+|..|+ +.|. +|+|++++..
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 479999999999999999999 5687 6999998753
No 290
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.07 E-value=0.00061 Score=74.67 Aligned_cols=70 Identities=7% Similarity=0.067 Sum_probs=52.2
Q ss_pred CCcEEEEC--CChHHHHHHHHHHHCCCceEEEccCCCCCcccccccCcccccCCcCceeeCCCCCCCCCCCCCCChhHHH
Q 009897 30 ERKIAIIG--AGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQTIESTKLQTPKSFYQFSDFAWPNSVTETFPDHNKVM 107 (523)
Q Consensus 30 ~~~v~IIG--aG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (523)
.++|+||| +|..|+.+|..|++.|.+|+++++.+ +...- .++. . .
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~-----------------------------~~~~--~-~ 574 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYM-----------------------------HFTL--E-Y 574 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHH-----------------------------HHTT--C-H
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccc-----------------------------cccc--c-H
Confidence 47899999 99999999999999999999999875 42100 0000 0 2
Q ss_pred HHHHHHHHHhCCCCceEeccEEEEEEe
Q 009897 108 EYLQAYAAHFNLFPSIKFDTKVTSIDR 134 (523)
Q Consensus 108 ~yl~~~~~~~~l~~~i~~~~~V~~v~~ 134 (523)
.++.+..++.++ .++++++|.+++.
T Consensus 575 ~~~~~~l~~~GV--~i~~~~~v~~i~~ 599 (729)
T 1o94_A 575 PNMMRRLHELHV--EELGDHFCSRIEP 599 (729)
T ss_dssp HHHHHHHHHTTC--EEECSEEEEEEET
T ss_pred HHHHHHHHhCCC--EEEcCcEEEEEEC
Confidence 345555667788 8999999998874
No 291
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.05 E-value=0.00082 Score=69.35 Aligned_cols=35 Identities=11% Similarity=0.313 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCc-eEEEccCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFK-PIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~-v~v~e~~~ 63 (523)
..++|+|||||..|+-+|..+.+.|.+ |+++++++
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 348999999999999999999999984 99999865
No 292
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.00 E-value=0.00081 Score=67.50 Aligned_cols=50 Identities=16% Similarity=0.215 Sum_probs=37.4
Q ss_pred CcchhhhccCCCEEEEecC-ceEEecC-cEEEcCCceeeeccEEEEecCCCCC
Q 009897 348 PRNFYDRVQGGGLSLMKSR-SFTFCKN-GLVIDGETTPLVTDIVIFATGYKSD 398 (523)
Q Consensus 348 ~~~~~~~~~~g~v~v~~~~-i~~~~~~-~v~l~dG~~~~~~D~VI~ATG~~~~ 398 (523)
...+.+.+.+.+++++.+. +.+++.+ .|++.||++ +.+|.||.|+|....
T Consensus 110 ~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~-~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 110 HDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEV-LEADLIVGADGVGSK 161 (379)
T ss_dssp HHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCE-EECSEEEECCCTTCH
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCE-EEcCEEEECCCccHH
Confidence 3445566666678888775 7776543 577889988 999999999998763
No 293
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=96.99 E-value=0.0012 Score=68.83 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 226 NGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 226 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
...+|+|||+|.+|+.+|..|++.+. +|+++.+.+.
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~---~V~liEk~~~ 126 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGA---RVVLVEKRIK 126 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCC---eEEEEEeccc
Confidence 36799999999999999999999875 4999998764
No 294
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.91 E-value=0.00089 Score=71.36 Aligned_cols=43 Identities=21% Similarity=0.451 Sum_probs=41.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCCccccc
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIGGVWSQ 71 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~GG~w~~ 71 (523)
|.+||+|||+|..|...|..|.+.|.+|+++|++++.||.|+.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 5799999999999999999999999999999999999999985
No 295
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.87 E-value=0.0016 Score=68.75 Aligned_cols=35 Identities=20% Similarity=0.432 Sum_probs=32.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
.++|+|||+|++|+.+|..|++.+.+|+||++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 48999999999999999999999999999999875
No 296
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.81 E-value=0.00085 Score=70.98 Aligned_cols=36 Identities=28% Similarity=0.401 Sum_probs=33.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
..+|++|||+|++|+.+|.+|.+.|.+|+|+|+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 458999999999999999999999999999999764
No 297
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.75 E-value=0.0065 Score=69.10 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=31.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-ceEEEccCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGF-KPIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~~ 63 (523)
..++|+|||||..|+.+|..+++.|. +|+|+++.+
T Consensus 331 ~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 331 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 34699999999999999999999997 899999864
No 298
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.72 E-value=0.00096 Score=70.17 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHHH-CCCceEEEccCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLE-NGFKPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~-~g~~v~v~e~~~~ 64 (523)
++|+||||+|++|+.+|.+|.+ .+++|+|+|+...
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 5999999999999999999998 6789999998764
No 299
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.69 E-value=0.005 Score=65.02 Aligned_cols=35 Identities=23% Similarity=0.467 Sum_probs=32.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
.++|+|||+|.+|+.+|..|++.+.+|++|++++.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 48999999999999999999999999999999875
No 300
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=96.64 E-value=0.0029 Score=63.86 Aligned_cols=51 Identities=16% Similarity=0.232 Sum_probs=37.1
Q ss_pred cCcchhhhccCC-CEEEEecC-ceEEec--C----cEEEcCCceeeeccEEEEecCCCCC
Q 009897 347 LPRNFYDRVQGG-GLSLMKSR-SFTFCK--N----GLVIDGETTPLVTDIVIFATGYKSD 398 (523)
Q Consensus 347 ~~~~~~~~~~~g-~v~v~~~~-i~~~~~--~----~v~l~dG~~~~~~D~VI~ATG~~~~ 398 (523)
+...+.+.+++. +++++.+. +.+++. + .|++.+|++ +++|.||.|+|....
T Consensus 109 l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~-~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 109 LRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRV-LRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCE-EEEEEEEECCCTTCH
T ss_pred HHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCE-EECCEEEECCCCChH
Confidence 334556666665 79988775 777653 2 466778887 999999999998653
No 301
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.58 E-value=0.00099 Score=70.26 Aligned_cols=35 Identities=29% Similarity=0.307 Sum_probs=32.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGI 65 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~ 65 (523)
++|++|||||++|+.+|.+|.+ |.+|+|+|+....
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 4899999999999999999999 9999999998665
No 302
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.58 E-value=0.0055 Score=64.43 Aligned_cols=49 Identities=12% Similarity=0.140 Sum_probs=37.5
Q ss_pred cchhhhccCCCEEEEecC-ceEEec--C---cEEEcCCceeeeccEEEEecCCCCC
Q 009897 349 RNFYDRVQGGGLSLMKSR-SFTFCK--N---GLVIDGETTPLVTDIVIFATGYKSD 398 (523)
Q Consensus 349 ~~~~~~~~~g~v~v~~~~-i~~~~~--~---~v~l~dG~~~~~~D~VI~ATG~~~~ 398 (523)
..+.+.+++.+++++.+. ++++.. + +|.+.+|++ +.+|.||+|+|..+.
T Consensus 224 ~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~-i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 224 EKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE-IKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCE-EECSCEEECCCTTCH
T ss_pred HHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCE-EECCEEEECCCCChh
Confidence 345666666788988875 776643 2 277889988 999999999999874
No 303
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=96.53 E-value=0.003 Score=60.66 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=29.4
Q ss_pred CEEEEEcCCCCHHHHHHHHHHh-cCCccCEEEEEeece
Q 009897 228 KRVTVIGFQKSAVDVAAEVANR-NGVRYPCTLLFKTVH 264 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~-~~~~~~Vt~~~r~~~ 264 (523)
..|+|||+|.+|+.+|..+++. +. +|+++.+.+.
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~---~V~viEk~~~ 74 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNV---QVAIIEQSVS 74 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTS---CEEEEESSSS
T ss_pred cCEEEECccHHHHHHHHHHHHcCCC---eEEEEECCCC
Confidence 4799999999999999999985 54 4999998753
No 304
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.50 E-value=0.0019 Score=67.56 Aligned_cols=38 Identities=16% Similarity=0.161 Sum_probs=34.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGIG 66 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~G 66 (523)
..+|++|||+|++|+.+|..|.+.|.+|+|+|+....+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 35899999999999999999999999999999987553
No 305
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.49 E-value=0.0033 Score=67.03 Aligned_cols=48 Identities=10% Similarity=0.148 Sum_probs=35.7
Q ss_pred cchhhhccC-CCEEEEecCceEEe--cC---cEEEcCCceeeeccEEEEecCCCC
Q 009897 349 RNFYDRVQG-GGLSLMKSRSFTFC--KN---GLVIDGETTPLVTDIVIFATGYKS 397 (523)
Q Consensus 349 ~~~~~~~~~-g~v~v~~~~i~~~~--~~---~v~l~dG~~~~~~D~VI~ATG~~~ 397 (523)
..+.+.+++ .+|++....+..+. ++ +|++.+|.+ +.+|.||+|||-.+
T Consensus 128 ~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~-I~Ad~VVLATGt~s 181 (651)
T 3ces_A 128 QAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLK-FRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEE-EEEEEEEECCSTTT
T ss_pred HHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCE-EECCEEEEcCCCCc
Confidence 345566666 68988777777773 33 367778877 99999999999753
No 306
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.48 E-value=0.00068 Score=69.10 Aligned_cols=35 Identities=17% Similarity=0.189 Sum_probs=30.0
Q ss_pred CCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 227 GKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 227 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
..+|+|||+|.+|+-+|..+++.+.+ |+++.+.+.
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~---V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRR---VLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 35799999999999999999998754 999998754
No 307
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.37 E-value=0.002 Score=68.35 Aligned_cols=36 Identities=25% Similarity=0.342 Sum_probs=32.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-CceEEEccCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENG-FKPIVFEARSG 64 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g-~~v~v~e~~~~ 64 (523)
.++|++|||||.||+.+|.+|.+.+ .+|+|+|+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 3489999999999999999999987 79999999765
No 308
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.29 E-value=0.0059 Score=51.77 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=33.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 27 PKMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 27 ~~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
..+..+|+|||+|..|...|..|.+.|++|+++|+++
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3466889999999999999999999999999999853
No 309
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.29 E-value=0.01 Score=57.96 Aligned_cols=33 Identities=15% Similarity=0.203 Sum_probs=29.3
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeec
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTV 263 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~ 263 (523)
.+|+|||+|.+|+-+|..|++.+. +|+++.+.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~---~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGH---QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCC---cEEEEECCC
Confidence 469999999999999999999875 499999875
No 310
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.26 E-value=0.0037 Score=65.34 Aligned_cols=36 Identities=19% Similarity=0.270 Sum_probs=33.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
..+|++|||+|++|+.+|..|.+.|.+|+|+|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 358999999999999999999999999999998754
No 311
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.25 E-value=0.0026 Score=64.20 Aligned_cols=35 Identities=14% Similarity=0.176 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 227 GKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 227 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
..+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~---~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGV---DVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCC---CEEEEecCCC
Confidence 4689999999999999999999875 4999998765
No 312
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.24 E-value=0.0037 Score=66.64 Aligned_cols=38 Identities=24% Similarity=0.208 Sum_probs=33.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHH-CCCceEEEccCCCC
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLE-NGFKPIVFEARSGI 65 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~-~g~~v~v~e~~~~~ 65 (523)
+..+|++|||+|++|+.+|..|.+ .|.+|+|+|+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 345899999999999999999999 79999999987643
No 313
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.18 E-value=0.012 Score=61.40 Aligned_cols=35 Identities=17% Similarity=0.188 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCceEEEccCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~~ 64 (523)
.|+|+|||+|.+|..++..|++. +.+|+++-|++.
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 37899999999999999999875 678999988753
No 314
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.17 E-value=0.0026 Score=67.31 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=33.0
Q ss_pred CCcEEEECCChHHHHHHHHHHH-CCCceEEEccCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLE-NGFKPIVFEARSGI 65 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~-~g~~v~v~e~~~~~ 65 (523)
++|++|||||.+|+.+|.+|.+ .+.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4799999999999999999999 68999999998755
No 315
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.16 E-value=0.0063 Score=64.64 Aligned_cols=48 Identities=15% Similarity=0.150 Sum_probs=35.5
Q ss_pred CcchhhhccC-CCEEEEecCceEEe--cC---cEEEcCCceeeeccEEEEecCCC
Q 009897 348 PRNFYDRVQG-GGLSLMKSRSFTFC--KN---GLVIDGETTPLVTDIVIFATGYK 396 (523)
Q Consensus 348 ~~~~~~~~~~-g~v~v~~~~i~~~~--~~---~v~l~dG~~~~~~D~VI~ATG~~ 396 (523)
...+.+.+++ .+|++....+..+. ++ +|++.+|.+ +.+|.||+|||-.
T Consensus 126 ~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~-i~AdaVVLATG~~ 179 (637)
T 2zxi_A 126 REYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVE-YKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCE-EECSEEEECCTTC
T ss_pred HHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcE-EEeCEEEEccCCC
Confidence 3445566666 68988777777764 33 377888987 9999999999964
No 316
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.09 E-value=0.004 Score=65.77 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=33.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-CCceEEEccCCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLEN-GFKPIVFEARSGI 65 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~-g~~v~v~e~~~~~ 65 (523)
+.+|++|||+|++|+.+|.+|.+. |.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 458999999999999999999998 8999999998654
No 317
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.09 E-value=0.0034 Score=66.57 Aligned_cols=35 Identities=29% Similarity=0.394 Sum_probs=32.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-CCceEEEccCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLEN-GFKPIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~-g~~v~v~e~~~ 63 (523)
.++|++|||||.+|+.+|.+|.+. +.+|+|+|+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 458999999999999999999985 78999999977
No 318
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.07 E-value=0.0067 Score=61.31 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 226 NGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 226 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
+.-+|+|||+|.+|+-+|..|++.+.. |+++.|.+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~---V~v~E~~~~ 57 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGID---CDVYEAVKE 57 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCC
Confidence 356899999999999999999998754 999999764
No 319
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.03 E-value=0.015 Score=57.13 Aligned_cols=33 Identities=15% Similarity=0.037 Sum_probs=28.2
Q ss_pred CEEEEEcCCCCHHHHHHHHHH---hcCCccCEEEEEeec
Q 009897 228 KRVTVIGFQKSAVDVAAEVAN---RNGVRYPCTLLFKTV 263 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~---~~~~~~~Vt~~~r~~ 263 (523)
++|+|||+|.+|+-+|..|++ .+ .+|+++.+.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G---~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGP---LYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CC---EEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCC---ceEEEEECCC
Confidence 379999999999999999998 54 3599998864
No 320
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.02 E-value=0.0071 Score=64.39 Aligned_cols=33 Identities=24% Similarity=0.327 Sum_probs=29.4
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeec
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTV 263 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~ 263 (523)
-.|+|||+|..|+.+|..+++.+.. |+++.+.+
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~k---VlLIEk~~ 54 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLH---CLLITSDL 54 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCG
T ss_pred CCEEEECccHHHHHHHHHHHHCCCc---EEEEEecc
Confidence 4799999999999999999998754 99999864
No 321
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=95.98 E-value=0.0074 Score=60.64 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=29.4
Q ss_pred EEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 229 RVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 229 ~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
+|+|||+|.+|.-+|..|++.+.+ |+++.|.+.
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~---v~v~E~~~~ 36 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGID---NVILERQTP 36 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCC---EEEECSSCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 699999999999999999998754 999998753
No 322
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=95.88 E-value=0.0048 Score=62.60 Aligned_cols=33 Identities=21% Similarity=0.106 Sum_probs=29.2
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeec
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTV 263 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~ 263 (523)
.+|+|||+|.+|+-+|..|++.+. +|+++.+.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~---~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGF---KVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCC
Confidence 479999999999999999999875 499999874
No 323
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=95.83 E-value=0.002 Score=66.20 Aligned_cols=48 Identities=21% Similarity=0.293 Sum_probs=36.2
Q ss_pred cchhhhccCCCEEEEecC-ceEEe--cC---cEEEcCCceeeeccEEEEecCCCC
Q 009897 349 RNFYDRVQGGGLSLMKSR-SFTFC--KN---GLVIDGETTPLVTDIVIFATGYKS 397 (523)
Q Consensus 349 ~~~~~~~~~g~v~v~~~~-i~~~~--~~---~v~l~dG~~~~~~D~VI~ATG~~~ 397 (523)
+.+.+.+++.+|+++.+. +.++. ++ +|.+.+|++ +.+|.||+|||-..
T Consensus 138 ~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~-i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 138 DALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEV-LETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCE-EECSCEEECCCCSS
T ss_pred HHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCE-EECCEEEECCCCCc
Confidence 456666777788988775 66664 33 267788887 99999999999876
No 324
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.80 E-value=0.0035 Score=63.45 Aligned_cols=34 Identities=18% Similarity=0.145 Sum_probs=29.6
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
-+|+|||+|.+|+-+|..+++.+.+ |+++.+.+.
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~---V~vlEk~~~ 38 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKS---VTVFDNGKK 38 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCC---EEEEeCCCC
Confidence 3699999999999999999998754 999998753
No 325
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=95.79 E-value=0.017 Score=58.10 Aligned_cols=35 Identities=14% Similarity=0.142 Sum_probs=30.6
Q ss_pred CCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 227 GKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 227 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
..+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~---~v~v~E~~~~ 60 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGI---DVSVYERDND 60 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC---EEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCC
Confidence 4689999999999999999999875 4999998754
No 326
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.68 E-value=0.011 Score=51.01 Aligned_cols=35 Identities=23% Similarity=0.391 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
...+|+|||+|..|..+|..|.+.|.+|+++|+++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34789999999999999999999999999999864
No 327
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.68 E-value=0.014 Score=50.17 Aligned_cols=34 Identities=9% Similarity=0.075 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
...+|+|+|+|..|...|..|.+.|++|+++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 4578999999999999999999999999999985
No 328
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.68 E-value=0.024 Score=56.87 Aligned_cols=33 Identities=15% Similarity=0.114 Sum_probs=29.7
Q ss_pred EEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 229 RVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 229 ~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
+|+|||+|.+|.=+|..|++.+.. |+++.|.+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~---v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIK---VTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCC---EEEEecCCC
Confidence 799999999999999999998754 999998764
No 329
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.59 E-value=0.011 Score=47.99 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=31.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-CceEEEccC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENG-FKPIVFEAR 62 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g-~~v~v~e~~ 62 (523)
|.++|+|+|+|..|..++..|.+.| ++|++++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 3468999999999999999999999 899999985
No 330
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=95.58 E-value=0.031 Score=59.23 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=29.9
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
-.|+|||+|.+|+-+|..+++.+.. |+++.+.+.
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~---V~vlEk~~~ 155 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGAN---VILVDKAPF 155 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 3799999999999999999998754 999998764
No 331
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.53 E-value=0.025 Score=59.57 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=32.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
.++|+|||+|.+|+..|..|++.+.+|+++++.+.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 48999999999999999999999999999998764
No 332
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=95.51 E-value=0.014 Score=62.11 Aligned_cols=35 Identities=11% Similarity=0.134 Sum_probs=30.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeec
Q 009897 226 NGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTV 263 (523)
Q Consensus 226 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~ 263 (523)
...+|+|||||.+|+-+|..|++.+. +|+++.+.+
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~---~V~LiEr~~ 56 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGH---DVTIYERSA 56 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCC---CEEEEcCCC
Confidence 35689999999999999999999865 499999874
No 333
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=95.46 E-value=0.037 Score=58.66 Aligned_cols=34 Identities=18% Similarity=0.171 Sum_probs=29.9
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
..|+|||+|.+|+-+|..+++.+.. |+++.+.+.
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~---V~vlEk~~~ 160 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAK---VILIEKEPV 160 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 4799999999999999999998754 999998764
No 334
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=95.38 E-value=0.0079 Score=61.86 Aligned_cols=34 Identities=18% Similarity=0.069 Sum_probs=29.4
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
-+|+|||+|.+|+-+|..|++.+. +|+++.+.+.
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~---~V~vlE~~~~ 40 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGL---KILLVDSKPW 40 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSC---CEEEECSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCC
Confidence 369999999999999999998765 4999998754
No 335
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.35 E-value=0.018 Score=48.53 Aligned_cols=32 Identities=16% Similarity=0.239 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
++|+|+|+|..|...|..|.+.|++|+++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 58999999999999999999999999999985
No 336
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.34 E-value=0.013 Score=53.84 Aligned_cols=35 Identities=17% Similarity=0.166 Sum_probs=30.7
Q ss_pred hcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEe
Q 009897 224 LINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFK 261 (523)
Q Consensus 224 ~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r 261 (523)
.+++++|+|||+|.+|.-.+..|.+.+.. |+++.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~---VtVvap 62 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAA---ITVVAP 62 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCC---EEEECS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCE---EEEECC
Confidence 35799999999999999999999998765 998865
No 337
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.07 E-value=0.021 Score=47.71 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
++|+|||+|..|...|..|.+.|.+|+++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 47999999999999999999999999999984
No 338
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=94.99 E-value=0.01 Score=62.87 Aligned_cols=34 Identities=24% Similarity=0.165 Sum_probs=29.6
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
-.|+|||+|.+|.-+|..|++.+.. |+++.|.+.
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~---V~VlEr~~~ 83 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVG---ALVLEKLVE 83 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCC---EEEEBSCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEcCCCC
Confidence 4699999999999999999998754 999998764
No 339
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=94.80 E-value=0.014 Score=60.97 Aligned_cols=33 Identities=27% Similarity=0.184 Sum_probs=29.2
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeec
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTV 263 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~ 263 (523)
.+|+|||+|.+|+-+|..|++.+. +|+++.+.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~---~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGH---RVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC---CEEEEccCC
Confidence 479999999999999999998764 499999875
No 340
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.69 E-value=0.07 Score=57.91 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=29.8
Q ss_pred CCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeec
Q 009897 227 GKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTV 263 (523)
Q Consensus 227 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~ 263 (523)
..+|+|||+|.+|+-+|..|++.+. +|+++.+.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~---~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGA---VVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTC---CEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCC---cEEEEeCCC
Confidence 3579999999999999999999875 499999853
No 341
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.68 E-value=0.033 Score=46.72 Aligned_cols=32 Identities=22% Similarity=0.291 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
++|+|+|+|..|...|..|.+.|.+|+++|++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999999985
No 342
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=94.63 E-value=0.017 Score=57.90 Aligned_cols=33 Identities=18% Similarity=0.059 Sum_probs=29.4
Q ss_pred EEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 229 RVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 229 ~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
.|+|||+|.+|.-+|..|++.+. +|+++.|.+.
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~---~V~l~E~~~~ 38 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGL---KTLMIEKRPE 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCC
Confidence 69999999999999999999875 4999998763
No 343
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=94.52 E-value=0.029 Score=56.68 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=30.1
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccC-EEEEEeece
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYP-CTLLFKTVH 264 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~-Vt~~~r~~~ 264 (523)
.+|+|||+|.+|+-+|..|++.+ .+ |+++.|.+.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G---~~~v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAG---IGKVTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCC---CCeEEEEECCCC
Confidence 57999999999999999999975 57 999999764
No 344
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.42 E-value=0.18 Score=54.58 Aligned_cols=34 Identities=15% Similarity=0.132 Sum_probs=29.9
Q ss_pred CCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeec
Q 009897 227 GKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTV 263 (523)
Q Consensus 227 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~ 263 (523)
..+|+|||+|.+|+-+|..|++.+. +|+++.+.+
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~---~V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGW---QVTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCC
Confidence 3689999999999999999999875 499999853
No 345
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.29 E-value=0.044 Score=48.47 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHC-CCceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLEN-GFKPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~-g~~v~v~e~~ 62 (523)
..+|+|||+|..|..+|..|.+. |++|+++|++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 46899999999999999999999 9999999985
No 346
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=94.29 E-value=0.11 Score=55.04 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=30.0
Q ss_pred CCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 227 GKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 227 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
..+|+|||+|.+|+.+|..+++.+. +|+++.+.+.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~---~v~~~e~~~~ 160 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGA---KVILLEKEPI 160 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSC---CEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---cEEEEecCCC
Confidence 4579999999999999999998765 4999998754
No 347
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.17 E-value=0.047 Score=52.67 Aligned_cols=33 Identities=15% Similarity=0.420 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|+|||+|.-|...|..|++.|++|+++|++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 679999999999999999999999999999853
No 348
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=94.14 E-value=0.11 Score=54.04 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=29.3
Q ss_pred EEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 229 RVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 229 ~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
.|+|||+|.+|+-.|..+++.+.+ |+++.+.+.
T Consensus 43 DVvVVGaG~AGl~AA~~aa~~G~~---V~vlEk~~~ 75 (510)
T 4at0_A 43 DVVVAGYGIAGVAASIEAARAGAD---VLVLERTSG 75 (510)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 699999999999999999998754 999998754
No 349
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.10 E-value=0.043 Score=53.45 Aligned_cols=34 Identities=24% Similarity=0.288 Sum_probs=30.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
|+++|+|||+|.-|.+.|..|.+.|.+|++++|+
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4468999999999999999999999999999984
No 350
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.07 E-value=0.049 Score=52.04 Aligned_cols=33 Identities=21% Similarity=0.417 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|+|||+|.-|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 689999999999999999999999999999853
No 351
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=93.92 E-value=0.056 Score=56.22 Aligned_cols=35 Identities=17% Similarity=0.121 Sum_probs=30.7
Q ss_pred CCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 227 GKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 227 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
..+|+|||+|.+|.-+|..|++.+.. |+++.|.+.
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~ 46 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVD---VMVLEQLPQ 46 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCC
Confidence 45799999999999999999998754 999999764
No 352
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=93.92 E-value=0.069 Score=56.02 Aligned_cols=34 Identities=15% Similarity=0.077 Sum_probs=30.1
Q ss_pred CEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 228 KRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
..|+|||+|.+|+-+|..|++.+.. |+++.|.+.
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~---v~viEr~~~ 39 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVR---VLVVERRPG 39 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 4799999999999999999998754 999998764
No 353
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.80 E-value=0.048 Score=52.95 Aligned_cols=34 Identities=32% Similarity=0.385 Sum_probs=29.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
|+++|+|||+|.-|.+.|..|.+.|.+|++++++
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 4468999999999999999999999999999984
No 354
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.79 E-value=0.055 Score=49.56 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=31.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
..++|+|||||..|...|..|++.|.+|+|+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3489999999999999999999999999999863
No 355
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=93.48 E-value=0.057 Score=56.16 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=30.6
Q ss_pred CCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 227 GKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 227 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
...|+|||+|.+|.-+|..|++.+.. |+++.|.+.
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~ 45 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVE---VVVLERLVE 45 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 34799999999999999999998754 999999764
No 356
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.47 E-value=0.061 Score=55.03 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=32.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
.++|+|||+|.-|+..|..|++.|++|+++|+++.
T Consensus 2 ~mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 2 SLDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 35899999999999999999999999999998753
No 357
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.43 E-value=0.068 Score=54.80 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.++|+|||.|.+|+++|..|+++|++|+++|.+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4789999999999999999999999999999864
No 358
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.38 E-value=0.064 Score=48.97 Aligned_cols=32 Identities=16% Similarity=0.356 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 32 KIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 32 ~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
+|+|||+|..|...|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999853
No 359
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.33 E-value=0.07 Score=53.39 Aligned_cols=33 Identities=33% Similarity=0.391 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.+|+|||+|..|+.+|+.|...|.+|+++|++.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 689999999999999999999999999999864
No 360
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.23 E-value=0.063 Score=51.59 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=30.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
|.++|+|||+|.-|.+.|..|.+.|.+|++++|+.
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 44689999999999999999999999999999863
No 361
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.20 E-value=0.057 Score=55.17 Aligned_cols=35 Identities=31% Similarity=0.635 Sum_probs=32.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGI 65 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~ 65 (523)
++|+|||.|.+|+++|..|.++|++|+++|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 68999999999999999999999999999986644
No 362
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.11 E-value=0.068 Score=50.74 Aligned_cols=35 Identities=14% Similarity=0.223 Sum_probs=31.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
|.++|+|+|||..|...+..|+++|++|+++.|+.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 44789999999999999999999999999998853
No 363
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.90 E-value=0.086 Score=50.86 Aligned_cols=32 Identities=28% Similarity=0.277 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
.+|+|||+|.-|...|..|.+.|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 47999999999999999999999999999985
No 364
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.85 E-value=0.19 Score=52.08 Aligned_cols=46 Identities=17% Similarity=0.197 Sum_probs=33.9
Q ss_pred HHHhCCCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEEEEeeeec
Q 009897 114 AAHFNLFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFVILCIGRY 190 (523)
Q Consensus 114 ~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~vVlAtG~~ 190 (523)
+++.|+ .+++++.|.++.... +...|.+.++. ++.+|.||+|+|..
T Consensus 267 l~~~GV--~v~~~~~v~~i~~~~----------------------~v~~v~~~~g~-------~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 267 LERWGI--DYVHIPNVKRVEGNE----------------------KVERVIDMNNH-------EYKVDALIFADGRR 312 (493)
T ss_dssp HHHHTC--EEEECSSEEEEECSS----------------------SCCEEEETTCC-------EEECSEEEECCCEE
T ss_pred HHhCCc--EEEeCCeeEEEecCC----------------------ceEEEEeCCCe-------EEEeCEEEECCCcC
Confidence 456677 788999999987543 23445555544 89999999999965
No 365
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.81 E-value=0.061 Score=50.94 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
.++|+|||+|..|...|..|++.|.+|+|+++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 478999999999999999999999999999974
No 366
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.79 E-value=0.11 Score=51.02 Aligned_cols=32 Identities=25% Similarity=0.217 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
++|+|||+|.-|.+.|..|.+.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 58999999999999999999999999999873
No 367
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.59 E-value=0.12 Score=49.95 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.+|.|||+|.-|...|..|.+.|++|++++++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999998853
No 368
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.57 E-value=0.079 Score=52.52 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.+|+|||+|..|+.+|+.|...|.+|+++|++.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 789999999999999999999999999999864
No 369
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.48 E-value=0.12 Score=50.15 Aligned_cols=34 Identities=18% Similarity=0.399 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
..+|+|||||.-|...|..++..|++|+++|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999999999999999854
No 370
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.40 E-value=0.13 Score=50.86 Aligned_cols=34 Identities=29% Similarity=0.331 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
..+|+|||+|.-|.+.|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3689999999999999999999999999999853
No 371
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.35 E-value=0.11 Score=50.77 Aligned_cols=36 Identities=31% Similarity=0.470 Sum_probs=31.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 27 PKMERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 27 ~~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
+.|+.+|.|||+|.-|.+.|..|.+.|++|++++++
T Consensus 11 ~~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 11 HHMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 347789999999999999999999999999999885
No 372
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=92.32 E-value=0.083 Score=50.85 Aligned_cols=36 Identities=31% Similarity=0.533 Sum_probs=29.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
|+++|.+||-|.-|...|.+|++.|++|+++|++..
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 667899999999999999999999999999998654
No 373
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.31 E-value=0.079 Score=52.59 Aligned_cols=36 Identities=14% Similarity=0.130 Sum_probs=31.9
Q ss_pred CCCC-cEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 28 KMER-KIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 28 ~~~~-~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
+|.. +|+|||+|.-|.+.|..|.+.|++|++++++.
T Consensus 12 ~m~M~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 12 LLYLNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred hhccCeEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4444 89999999999999999999999999999864
No 374
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.27 E-value=0.14 Score=46.63 Aligned_cols=35 Identities=23% Similarity=0.291 Sum_probs=30.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
++.++|+|||+|..|...|..|.+.|++|++++++
T Consensus 26 ~~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 26 DEAPKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34468999999999999999999999999999885
No 375
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.17 E-value=0.16 Score=48.20 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.++|+|+|+|..|...+..|+++|++|+++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3689999999999999999999999999999864
No 376
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.16 E-value=0.055 Score=45.79 Aligned_cols=33 Identities=21% Similarity=0.237 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
.++|+|||+|..|...|..|.+.|++|++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 578999999999999999999999999999885
No 377
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.12 E-value=0.12 Score=49.88 Aligned_cols=33 Identities=39% Similarity=0.467 Sum_probs=29.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
|..+|+|||+|.-|.+.|..|. .|.+|++++++
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 4468999999999999999999 99999999985
No 378
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.11 E-value=0.14 Score=47.72 Aligned_cols=36 Identities=19% Similarity=0.195 Sum_probs=31.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
...++|.|||+|.-|.+.|..|++.|++|++++++.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 345889999999999999999999999999999864
No 379
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.10 E-value=0.13 Score=49.51 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=31.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
+.++|.|||.|.-|...|..|++.|++|+++++++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34689999999999999999999999999999853
No 380
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.09 E-value=0.15 Score=49.83 Aligned_cols=35 Identities=29% Similarity=0.401 Sum_probs=31.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-ceEEEccCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGF-KPIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~~ 63 (523)
|..+|+|||||..|...|..|+..|+ +|+++|.+.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 44689999999999999999999998 999999853
No 381
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.06 E-value=0.15 Score=46.11 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=31.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
++|.|||+|.-|.+.|..|.+.|++|++++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 5799999999999999999999999999998754
No 382
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.06 E-value=0.071 Score=49.37 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=28.8
Q ss_pred EEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeec
Q 009897 229 RVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTV 263 (523)
Q Consensus 229 ~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~ 263 (523)
.|+|||+|++|.-+|..|++.+.. |+++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~---V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC---EEEEECCC
Confidence 499999999999999999998754 99999865
No 383
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.03 E-value=0.14 Score=48.65 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 32 KIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 32 ~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
+|+|||+|.-|...|..|.+.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 69999999999999999999999999999864
No 384
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.98 E-value=0.12 Score=49.68 Aligned_cols=35 Identities=23% Similarity=0.185 Sum_probs=32.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
.++|.|||.|.-|...|..|++.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 385
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.95 E-value=0.15 Score=49.61 Aligned_cols=33 Identities=18% Similarity=0.411 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999999999999999999999999999864
No 386
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=91.91 E-value=0.11 Score=55.09 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=29.3
Q ss_pred CEEEEEcCCCCHHHHHHHHHHh------cCCccCEEEEEeece
Q 009897 228 KRVTVIGFQKSAVDVAAEVANR------NGVRYPCTLLFKTVH 264 (523)
Q Consensus 228 k~V~VvG~G~sg~d~a~~l~~~------~~~~~~Vt~~~r~~~ 264 (523)
-.|+|||+|.+|.-+|..|++. +. +|+++.|.+.
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~---~V~vlEk~~~ 75 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDL---RVCLVEKAAH 75 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCC---CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCC---cEEEEeCCCC
Confidence 3699999999999999999997 54 4999998753
No 387
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.90 E-value=0.15 Score=49.89 Aligned_cols=33 Identities=18% Similarity=0.352 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-ceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGF-KPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~~ 63 (523)
.+|+|||||..|.+.|..|+..|+ +|+++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 479999999999999999999998 999999853
No 388
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.90 E-value=0.13 Score=51.86 Aligned_cols=34 Identities=35% Similarity=0.466 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
..+|+|||+|..|+.+|..+...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4789999999999999999999999999999864
No 389
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.89 E-value=0.14 Score=50.48 Aligned_cols=32 Identities=19% Similarity=0.372 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
++|+|||+|..|...|..|.+.|++|++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 58999999999999999999999999999885
No 390
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.70 E-value=0.17 Score=48.98 Aligned_cols=33 Identities=27% Similarity=0.482 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|.|||.|.-|...|..|++.|++|++++++.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 689999999999999999999999999999864
No 391
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.63 E-value=0.16 Score=50.81 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
..+|+|||+|..|+.++..+...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999999999999999999999999999854
No 392
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.62 E-value=0.12 Score=51.11 Aligned_cols=36 Identities=28% Similarity=0.308 Sum_probs=32.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCC-ceEEEccC
Q 009897 27 PKMERKIAIIGAGVSGLLACKYTLENGF-KPIVFEAR 62 (523)
Q Consensus 27 ~~~~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~ 62 (523)
+..+.+|+|+|||.+|+.+|+.|...|. +|+++|++
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 3345799999999999999999999999 89999986
No 393
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=91.60 E-value=0.21 Score=45.32 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=30.9
Q ss_pred CCCcEEEECC-ChHHHHHHHHHH-HCCCceEEEccCC
Q 009897 29 MERKIAIIGA-GVSGLLACKYTL-ENGFKPIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIGa-G~aGl~aA~~l~-~~g~~v~v~e~~~ 63 (523)
|.+.|+|+|| |..|...++.|+ +.|++|+++.|+.
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 4467999995 999999999999 8999999999853
No 394
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=91.55 E-value=0.28 Score=51.42 Aligned_cols=31 Identities=23% Similarity=0.290 Sum_probs=27.5
Q ss_pred EEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeec
Q 009897 229 RVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTV 263 (523)
Q Consensus 229 ~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~ 263 (523)
.|+|||+|.+|+-+|..+++ +. +|+++.+.+
T Consensus 10 DVvVVG~G~AGl~aAl~la~-G~---~V~vlEk~~ 40 (540)
T 1chu_A 10 DVLIIGSGAAGLSLALRLAD-QH---QVIVLSKGP 40 (540)
T ss_dssp SEEEECCSHHHHHHHHHHTT-TS---CEEEECSSC
T ss_pred CEEEECccHHHHHHHHHHhc-CC---cEEEEECCC
Confidence 69999999999999999998 64 499999865
No 395
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.53 E-value=0.15 Score=52.47 Aligned_cols=33 Identities=21% Similarity=0.417 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.+|+|||+|.-|+..|..|++.|++|+++|++.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 689999999999999999999999999999864
No 396
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.50 E-value=0.17 Score=49.96 Aligned_cols=34 Identities=18% Similarity=0.439 Sum_probs=31.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
|+|+|||||..|..+++.+++.|++++++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 7899999999999999999999999999997654
No 397
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.38 E-value=0.15 Score=50.50 Aligned_cols=36 Identities=22% Similarity=0.413 Sum_probs=32.3
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCC-ceEEEccC
Q 009897 27 PKMERKIAIIGAGVSGLLACKYTLENGF-KPIVFEAR 62 (523)
Q Consensus 27 ~~~~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~ 62 (523)
...+.+|+|+|||.+|..+|+.|...|. +|+++|+.
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3345899999999999999999999998 79999986
No 398
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.32 E-value=0.15 Score=49.51 Aligned_cols=35 Identities=20% Similarity=0.147 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC-CceEEEccCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENG-FKPIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g-~~v~v~e~~~ 63 (523)
|.++|.|||.|.-|...|..|++.| ++|++++++.
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4578999999999999999999999 9999999864
No 399
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.28 E-value=0.11 Score=47.53 Aligned_cols=33 Identities=24% Similarity=0.248 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEE-EccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIV-FEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v-~e~~~ 63 (523)
++|.|||+|.-|.+.|..|.+.|++|++ ++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5899999999999999999999999998 77753
No 400
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.26 E-value=0.23 Score=50.68 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|+|||+|.-|...|..|++.|++|+++|+++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 789999999999999999999999999999864
No 401
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.13 E-value=0.18 Score=49.95 Aligned_cols=32 Identities=31% Similarity=0.518 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
++|+|||+|..|+.++..|+..|.+|++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 78999999999999999999999999999985
No 402
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.08 E-value=0.22 Score=47.02 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
.++|+|||+|-+|.++|..|.+.|.+|+|+.|+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999999999999999999999885
No 403
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.06 E-value=0.21 Score=48.30 Aligned_cols=33 Identities=24% Similarity=0.479 Sum_probs=29.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~ 62 (523)
..+|+|||||..|...|..|+..|+ +++++|.+
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 3689999999999999999999996 89999874
No 404
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.03 E-value=0.24 Score=47.95 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=32.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCC--ceEEEccCC
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGF--KPIVFEARS 63 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~--~v~v~e~~~ 63 (523)
+|.++|.|||+|.-|.+.|..|++.|+ +|+++|+++
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 344789999999999999999999999 899999864
No 405
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.99 E-value=0.17 Score=47.27 Aligned_cols=33 Identities=21% Similarity=0.417 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-ceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGF-KPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~~ 63 (523)
.+|+|||+|-.|..+|+.|.+.|+ +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 689999999999999999999998 799999853
No 406
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.97 E-value=0.2 Score=51.52 Aligned_cols=34 Identities=29% Similarity=0.485 Sum_probs=32.0
Q ss_pred CcEEEECCChHHHHHHHHHHHC-CC-ceEEEccCCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLEN-GF-KPIVFEARSG 64 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~-g~-~v~v~e~~~~ 64 (523)
++|+|||+|.-|+..|..|++. |+ +|+++|++..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 5899999999999999999999 99 9999999765
No 407
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.90 E-value=0.2 Score=51.08 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=33.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSGI 65 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~~ 65 (523)
+.+++|||.|.-|+..|..|++.|++|+++|+++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 368999999999999999999999999999998654
No 408
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.85 E-value=0.2 Score=51.38 Aligned_cols=34 Identities=12% Similarity=0.033 Sum_probs=30.1
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEe
Q 009897 225 INGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFK 261 (523)
Q Consensus 225 ~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r 261 (523)
+++++|+|||+|.+|...+..|.+.+.. |+++..
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~---V~vi~~ 43 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGAR---LTVNAL 43 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBE---EEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCE---EEEEcC
Confidence 5689999999999999999999998764 988865
No 409
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=90.84 E-value=0.24 Score=44.01 Aligned_cols=33 Identities=36% Similarity=0.589 Sum_probs=30.6
Q ss_pred CcEEEECC-ChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGA-GVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGa-G~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|+|+|| |..|...++.|+++|.+|+++.|+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999999 9999999999999999999999854
No 410
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.81 E-value=0.25 Score=45.88 Aligned_cols=33 Identities=18% Similarity=0.355 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC----ceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF----KPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~----~v~v~e~~ 62 (523)
.++|.|||+|.-|.+.|..|.+.|+ +|++++++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 4689999999999999999999998 99999985
No 411
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.79 E-value=0.18 Score=52.10 Aligned_cols=35 Identities=20% Similarity=0.323 Sum_probs=31.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC--CCceEEEccCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLEN--GFKPIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~ 63 (523)
|..+|+|||+|..|+..|..|++. |++|+++|++.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 345899999999999999999998 78999999864
No 412
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.77 E-value=0.32 Score=46.87 Aligned_cols=34 Identities=21% Similarity=0.456 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.++|.|||.|.-|...|..|++.|++|++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999853
No 413
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.75 E-value=0.21 Score=47.67 Aligned_cols=33 Identities=21% Similarity=0.424 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|.|||.|.-|...|..|.+.|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 479999999999999999999999999999864
No 414
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.72 E-value=0.22 Score=48.31 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--ceEEEccC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGF--KPIVFEAR 62 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~--~v~v~e~~ 62 (523)
.+|+|||+|..|...|..|.+.|+ +|+++|++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 589999999999999999999998 99999984
No 415
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.69 E-value=0.22 Score=45.74 Aligned_cols=34 Identities=15% Similarity=0.290 Sum_probs=31.0
Q ss_pred CCCcEEEECC-ChHHHHHHHHHHHCCCceEEEccC
Q 009897 29 MERKIAIIGA-GVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 29 ~~~~v~IIGa-G~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
+.++|+|.|| |..|...+..|+++|++|+++.|+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECC
Confidence 4588999998 999999999999999999999985
No 416
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=90.67 E-value=0.22 Score=48.59 Aligned_cols=33 Identities=27% Similarity=0.323 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHH-HHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLL-ACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~-aA~~l~~~g~~v~v~e~~~ 63 (523)
++|.|||.|.+|++ +|..|.++|++|++.|+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 68999999999996 7888889999999999853
No 417
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=90.62 E-value=0.25 Score=51.14 Aligned_cols=36 Identities=19% Similarity=0.344 Sum_probs=33.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.|+.+|.|||.|.-|...|..|++.|++|++++++.
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 477899999999999999999999999999999865
No 418
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=90.59 E-value=0.32 Score=46.66 Aligned_cols=35 Identities=26% Similarity=0.416 Sum_probs=31.8
Q ss_pred CCCcEEEEC-CChHHHHHHHHHHHCCCceEEEccCC
Q 009897 29 MERKIAIIG-AGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIG-aG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
|.++|.||| +|.-|.+.|..|.+.|++|++++++.
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 446899999 99999999999999999999999864
No 419
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=90.53 E-value=0.21 Score=50.24 Aligned_cols=38 Identities=18% Similarity=0.352 Sum_probs=30.8
Q ss_pred ccCCCCC-CCcEEEECCChHHHHHHHHHHHCCCceEEEc
Q 009897 23 FSSGPKM-ERKIAIIGAGVSGLLACKYTLENGFKPIVFE 60 (523)
Q Consensus 23 ~~~~~~~-~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e 60 (523)
....+|| .++|+|||+|..|...+..+.+.|+++++++
T Consensus 16 ~~~~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 16 YFQGHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp -----CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred eEeccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 3344555 4799999999999999999999999999999
No 420
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.49 E-value=0.23 Score=48.26 Aligned_cols=34 Identities=29% Similarity=0.509 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.++|.|||.|.-|...|..|++.|++|++++++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3689999999999999999999999999999853
No 421
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.34 E-value=0.23 Score=47.48 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.++|.|||+|.-|-..|..|+ .|++|+++|+++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 478999999999999999999 999999999864
No 422
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.33 E-value=0.21 Score=47.84 Aligned_cols=34 Identities=29% Similarity=0.497 Sum_probs=30.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
|..+|+|||+|..|...|..|.+.|++|++++++
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ccceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3358999999999999999999999999999885
No 423
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.20 E-value=0.25 Score=48.82 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|.|||.|.-|...|..|++.|++|++++++.
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999864
No 424
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=90.17 E-value=0.32 Score=48.41 Aligned_cols=35 Identities=26% Similarity=0.484 Sum_probs=32.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
.++|+|||+|..|..++..+.+.|++|+++|..+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 47899999999999999999999999999997653
No 425
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=90.14 E-value=0.26 Score=49.88 Aligned_cols=34 Identities=12% Similarity=0.300 Sum_probs=31.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
.+|+|||.|..||.+|..|++.|++|+.+|-+..
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 6899999999999999999999999999997643
No 426
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=90.03 E-value=0.32 Score=46.27 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=30.8
Q ss_pred CcEEEECC-ChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGA-GVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGa-G~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|.|||+ |.-|...|..|.+.|++|++++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 58999999 9999999999999999999999864
No 427
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.01 E-value=0.3 Score=50.15 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|.|||+|.-|...|..|++.|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 689999999999999999999999999999853
No 428
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.00 E-value=0.27 Score=46.47 Aligned_cols=33 Identities=18% Similarity=0.076 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
.++|+|+|+|-.|.++|..|++.|.+|+|++|+
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 478999999999999999999999999999874
No 429
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.92 E-value=0.26 Score=48.88 Aligned_cols=32 Identities=25% Similarity=0.450 Sum_probs=30.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
++|+|||+|..|+.+|..|+..|.+|+++|++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 78999999999999999999999999999985
No 430
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.91 E-value=0.26 Score=47.80 Aligned_cols=33 Identities=27% Similarity=0.425 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-ceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGF-KPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~~ 63 (523)
.+|+|||+|..|...|..|++.|+ +|+++|++.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 589999999999999999999998 999999853
No 431
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=89.87 E-value=0.33 Score=46.63 Aligned_cols=36 Identities=19% Similarity=0.285 Sum_probs=32.3
Q ss_pred CCCcEEEECC-ChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 29 MERKIAIIGA-GVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 29 ~~~~v~IIGa-G~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
|.++|+|.|| |..|...+..|+++|++|+++++...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 4578999999 99999999999999999999998654
No 432
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.84 E-value=0.27 Score=48.97 Aligned_cols=33 Identities=24% Similarity=0.396 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
.++|+|||+|..|..+|..++..|.+|+++|++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 478999999999999999999999999999985
No 433
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=89.82 E-value=0.31 Score=47.70 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=30.9
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGA-GVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGa-G~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.++|+|+|| |..|...+..|++.|++|+++.|+.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 468999999 9999999999999999999999854
No 434
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=89.82 E-value=0.35 Score=45.92 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC---ceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF---KPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~---~v~v~e~~~ 63 (523)
.++|.|||+|--|.+.|..|.+.|+ +|++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4689999999999999999999998 899999853
No 435
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=89.76 E-value=0.36 Score=49.82 Aligned_cols=55 Identities=20% Similarity=0.129 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHhC-CCCceEeccEEEEEEeCCCCCcccccccccCCCCCCCCCCCCeEEEEeecccCCcceeEEEeCEE
Q 009897 105 KVMEYLQAYAAHFN-LFPSIKFDTKVTSIDRLVPSDEDEHSWDLWGGTGKPFSSSGKWNVTVQEARNVSSATEAYQVDFV 183 (523)
Q Consensus 105 ~~~~yl~~~~~~~~-l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~v 183 (523)
.+.+.+.+.+...+ + .|+++++|++|+... +.+.|++.++. ++.||+|
T Consensus 256 ~l~~~l~~~l~~~g~~--~i~~~~~V~~i~~~~----------------------~~v~v~~~~g~-------~~~ad~v 304 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRL--GYVFGCPVRSVVNER----------------------DAARVTARDGR-------EFVAKRV 304 (495)
T ss_dssp HHHHHHHHHHHTTTCE--EEESSCCEEEEEECS----------------------SSEEEEETTCC-------EEEEEEE
T ss_pred HHHHHHHHHhhhcCce--EEEeCCEEEEEEEcC----------------------CEEEEEECCCC-------EEEcCEE
Confidence 34444444444433 4 589999999999754 45888776654 7899999
Q ss_pred EEeeeec
Q 009897 184 ILCIGRY 190 (523)
Q Consensus 184 VlAtG~~ 190 (523)
|+|+|..
T Consensus 305 I~a~~~~ 311 (495)
T 2vvm_A 305 VCTIPLN 311 (495)
T ss_dssp EECCCGG
T ss_pred EECCCHH
Confidence 9999965
No 436
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=89.70 E-value=0.27 Score=47.17 Aligned_cols=33 Identities=18% Similarity=0.122 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~ 62 (523)
.++|+|||+|..|.++|..|++.|. +|+|++|+
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4789999999999999999999998 89999885
No 437
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.62 E-value=0.22 Score=47.46 Aligned_cols=33 Identities=18% Similarity=0.359 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|.|||.|.-|...|..|++.|++|+++++++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 479999999999999999999999999999864
No 438
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=89.56 E-value=0.25 Score=50.33 Aligned_cols=32 Identities=25% Similarity=0.394 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 32 KIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 32 ~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
+|+|||+|..|+..|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999864
No 439
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.47 E-value=0.24 Score=49.20 Aligned_cols=34 Identities=21% Similarity=0.106 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCC-------CceEEEccCCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENG-------FKPIVFEARSG 64 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g-------~~v~v~e~~~~ 64 (523)
++|+|||+|.-|.+.|..|++.| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 57999999999999999999999 99999998654
No 440
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.43 E-value=0.36 Score=46.86 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~~ 63 (523)
..+|+|||+|..|.+.|..|+..|+ +++++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4689999999999999999999998 999999853
No 441
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=89.43 E-value=0.68 Score=47.25 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=31.2
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeec
Q 009897 225 INGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTV 263 (523)
Q Consensus 225 ~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~ 263 (523)
+.+|+|+|||.|.+|+-+|..|.+.+.. |+.+.+++
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~~---V~~~D~~~ 42 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGAI---VTVNDGKP 42 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTCE---EEEEESSC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCE---EEEEeCCc
Confidence 5689999999999999999999998754 99987753
No 442
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=89.40 E-value=0.34 Score=48.06 Aligned_cols=36 Identities=22% Similarity=0.331 Sum_probs=31.4
Q ss_pred CCCCcEEEECC-ChHHHHHHHHHHHCCCceEEEccCC
Q 009897 28 KMERKIAIIGA-GVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 28 ~~~~~v~IIGa-G~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.|.++|+|.|| |..|...+..|++.|++|++++++.
T Consensus 26 ~M~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~ 62 (381)
T 1n7h_A 26 EPRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRS 62 (381)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred hhCCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCC
Confidence 35578999998 9999999999999999999999864
No 443
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=89.37 E-value=0.3 Score=48.21 Aligned_cols=41 Identities=22% Similarity=0.380 Sum_probs=31.8
Q ss_pred ccCCCCCCCcEEEECC-ChHHHHHHHHHHHC-CCceEEEccCC
Q 009897 23 FSSGPKMERKIAIIGA-GVSGLLACKYTLEN-GFKPIVFEARS 63 (523)
Q Consensus 23 ~~~~~~~~~~v~IIGa-G~aGl~aA~~l~~~-g~~v~v~e~~~ 63 (523)
..+..|+.++|+|+|| |..|...+..|+++ |++|++++++.
T Consensus 17 ~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 17 QGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp ------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCC
T ss_pred cCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCCh
Confidence 3333455689999995 99999999999998 99999999865
No 444
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=89.29 E-value=0.35 Score=47.39 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=29.8
Q ss_pred CcEEEECC-ChHHHHHHHHHHHCC-CceEEEccCC
Q 009897 31 RKIAIIGA-GVSGLLACKYTLENG-FKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGa-G~aGl~aA~~l~~~g-~~v~v~e~~~ 63 (523)
++|+|.|| |..|...+..|++.| .+|+++++..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~ 81 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLK 81 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 68999999 999999999999999 8999998854
No 445
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.27 E-value=0.33 Score=46.04 Aligned_cols=34 Identities=18% Similarity=0.025 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~~ 63 (523)
.++++|||+|-+|.++|..|.+.|. +|+|+.|+.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3789999999999999999999998 899999863
No 446
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.22 E-value=0.34 Score=45.27 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCC----CceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENG----FKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g----~~v~v~e~~~ 63 (523)
.+|.|||+|.-|.+.|..|.+.| .+|++++++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 57999999999999999999999 6899998854
No 447
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.20 E-value=0.37 Score=48.61 Aligned_cols=33 Identities=24% Similarity=0.440 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.+|+|||.|..|..+|..|.+.|++|+++|+++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 469999999999999999999999999999864
No 448
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=89.20 E-value=0.27 Score=47.54 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=30.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-ceEEEccC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGF-KPIVFEAR 62 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~ 62 (523)
++|.|||.|.-|...|..|++.|+ +|++++++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 689999999999999999999999 99999985
No 449
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.18 E-value=0.39 Score=46.69 Aligned_cols=33 Identities=18% Similarity=0.479 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-ceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGF-KPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~~ 63 (523)
.+|+|||||..|...|..|+..|+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 489999999999999999999998 899999753
No 450
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=89.15 E-value=0.51 Score=46.79 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=31.2
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGA-GVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGa-G~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.++|+|.|| |..|...+..|+++|++|+++++..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 63 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKK 63 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCC
Confidence 368999999 9999999999999999999999864
No 451
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.08 E-value=0.33 Score=49.99 Aligned_cols=36 Identities=17% Similarity=0.307 Sum_probs=31.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 28 KMERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 28 ~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
|..++|.|||+|.-|...|..|++.|++|++++++.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 445789999999999999999999999999999863
No 452
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.08 E-value=0.34 Score=46.63 Aligned_cols=31 Identities=19% Similarity=0.367 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHCCC--ceEEEccC
Q 009897 32 KIAIIGAGVSGLLACKYTLENGF--KPIVFEAR 62 (523)
Q Consensus 32 ~v~IIGaG~aGl~aA~~l~~~g~--~v~v~e~~ 62 (523)
+|+|||||..|...|..|+..|+ +|+++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 79999999999999999999998 89999974
No 453
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=88.98 E-value=0.43 Score=46.30 Aligned_cols=34 Identities=24% Similarity=0.442 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~~ 63 (523)
..+|+|||+|..|.+.|..|+..++ +++++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 3689999999999999999999888 899999753
No 454
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=88.89 E-value=0.31 Score=49.92 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
.++|+|||+|..|...+..|++.|.+|+|+++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 478999999999999999999999999999974
No 455
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.84 E-value=0.37 Score=46.73 Aligned_cols=32 Identities=34% Similarity=0.463 Sum_probs=29.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
.++|+|||+|.-|.+.|..|.+.|.+|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 368999999999999999999999999999 64
No 456
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=88.79 E-value=0.24 Score=47.80 Aligned_cols=31 Identities=23% Similarity=0.168 Sum_probs=29.0
Q ss_pred CcEEEECCChHHHHHHHHHHHC-----C-CceEEEcc
Q 009897 31 RKIAIIGAGVSGLLACKYTLEN-----G-FKPIVFEA 61 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~-----g-~~v~v~e~ 61 (523)
.+|+|||+|.-|...|..|.+. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999998 9 99999987
No 457
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=88.77 E-value=0.37 Score=46.25 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=31.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
..++|+|||+|..|..+|+.|...|.+|+++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 3488999999999999999999999999999984
No 458
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=88.73 E-value=0.37 Score=43.38 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=29.7
Q ss_pred cEEEEC-CChHHHHHHHHHHHCCCceEEEccCC
Q 009897 32 KIAIIG-AGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 32 ~v~IIG-aG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
+|+||| +|..|...|..|.+.|++|++++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999853
No 459
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=88.69 E-value=0.44 Score=46.09 Aligned_cols=32 Identities=19% Similarity=0.441 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-ceEEEccC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGF-KPIVFEAR 62 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~ 62 (523)
++|+|||+|..|...|..|+..|+ +++++|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 689999999999999999999999 99999985
No 460
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=88.67 E-value=0.38 Score=46.01 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=31.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
..++|+|||+|..|..+|+.|...|.+|+++++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 3478999999999999999999999999999984
No 461
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.64 E-value=0.33 Score=46.59 Aligned_cols=33 Identities=30% Similarity=0.445 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|.|||+|.-|...|..|.+.|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 579999999999999999999999999999853
No 462
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=88.64 E-value=0.26 Score=45.35 Aligned_cols=37 Identities=14% Similarity=0.236 Sum_probs=31.4
Q ss_pred CCCCCcEEEEC-CChHHHHHHHHHHHCC-CceEEEccCC
Q 009897 27 PKMERKIAIIG-AGVSGLLACKYTLENG-FKPIVFEARS 63 (523)
Q Consensus 27 ~~~~~~v~IIG-aG~aGl~aA~~l~~~g-~~v~v~e~~~ 63 (523)
+||.++|+|.| +|..|...+..|+++| ++|+++.|+.
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 34568899999 5999999999999999 8999999864
No 463
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=88.63 E-value=0.28 Score=50.05 Aligned_cols=37 Identities=27% Similarity=0.185 Sum_probs=32.8
Q ss_pred CCCCCCCcEEEECCChHHHHHHHHHHHCCCceEEEcc
Q 009897 25 SGPKMERKIAIIGAGVSGLLACKYTLENGFKPIVFEA 61 (523)
Q Consensus 25 ~~~~~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~ 61 (523)
++.||.++|+|+|+|..|+..+..+.+.|+++++++.
T Consensus 1 ~n~m~~~kiLI~g~g~~a~~i~~aa~~~G~~~v~v~~ 37 (446)
T 3ouz_A 1 SNAMEIKSILIANRGEIALRALRTIKEMGKKAICVYS 37 (446)
T ss_dssp -CTTCCCEEEECCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCccccceEEEECCCHHHHHHHHHHHHcCCEEEEEEc
Confidence 4667889999999999999999999999999998853
No 464
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.61 E-value=0.43 Score=42.93 Aligned_cols=32 Identities=28% Similarity=0.354 Sum_probs=29.5
Q ss_pred cEEEECC-ChHHHHHHHHHHHCCCceEEEccCC
Q 009897 32 KIAIIGA-GVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 32 ~v~IIGa-G~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
+|+|+|| |..|...+..|+++|++|+++.|+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999996 9999999999999999999999853
No 465
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=88.57 E-value=0.34 Score=49.01 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
.+|+|||+|.-|+..|..|++ |++|+++|+++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 489999999999999999998 999999998653
No 466
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=88.56 E-value=0.28 Score=46.37 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
.++|+|||+|-.|.++|..|++.|.+|+|++|+
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 478999999999999999999999999999885
No 467
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.46 E-value=0.19 Score=51.61 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|+|+|+|-.|...|+.|.+.|++|+|+|+++
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 479999999999999999999999999999875
No 468
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.34 E-value=0.22 Score=48.95 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCC-------CceEEEccCCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENG-------FKPIVFEARSG 64 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g-------~~v~v~e~~~~ 64 (523)
++|+|||+|.-|.+.|..|++.| ++|+++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 58999999999999999999998 89999998653
No 469
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=88.34 E-value=0.48 Score=45.58 Aligned_cols=35 Identities=34% Similarity=0.439 Sum_probs=31.3
Q ss_pred CCCcEEEECC-ChHHHHHHHHHHHCCCceEEEccCC
Q 009897 29 MERKIAIIGA-GVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIGa-G~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
|.++|+|+|| |..|...+..|++.|++|+++.|+.
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCC
Confidence 4468999997 9999999999999999999998853
No 470
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=88.18 E-value=0.33 Score=48.79 Aligned_cols=31 Identities=23% Similarity=0.212 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 32 KIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 32 ~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
+|+|||+|..|+..|..|++ |++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999864
No 471
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.16 E-value=0.41 Score=46.39 Aligned_cols=34 Identities=15% Similarity=0.292 Sum_probs=29.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC--ceEEEccC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGF--KPIVFEAR 62 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~--~v~v~e~~ 62 (523)
+..+|+|||||..|.+.|..|+..++ ++.++|..
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999998885 79999864
No 472
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=88.11 E-value=0.6 Score=46.54 Aligned_cols=34 Identities=29% Similarity=0.462 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.++|+|||+|..|..++..+.+.|++|+++|..+
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 4789999999999999999999999999998754
No 473
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.08 E-value=0.49 Score=48.68 Aligned_cols=33 Identities=18% Similarity=0.480 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
++|.|||+|.-|...|..|++.|++|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 589999999999999999999999999999864
No 474
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=88.06 E-value=0.35 Score=46.98 Aligned_cols=30 Identities=23% Similarity=0.386 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCCceEEEcc
Q 009897 32 KIAIIGAGVSGLLACKYTLENGFKPIVFEA 61 (523)
Q Consensus 32 ~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~ 61 (523)
+|+|||+|.-|...|..|.+.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 475
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=88.04 E-value=0.57 Score=45.81 Aligned_cols=35 Identities=14% Similarity=0.233 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 29 MERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
+..+|.|||.|.-|-+.|..|.+.|++|+++|+++
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34679999999999999999999999999999864
No 476
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=87.99 E-value=0.46 Score=45.52 Aligned_cols=34 Identities=29% Similarity=0.494 Sum_probs=30.7
Q ss_pred CCCcEEEECC-ChHHHHHHHHHHHCCCceEEEccC
Q 009897 29 MERKIAIIGA-GVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 29 ~~~~v~IIGa-G~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
|.++|+|.|| |..|...+..|+++|.+|+++.++
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4478999995 999999999999999999999986
No 477
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=87.91 E-value=0.41 Score=45.95 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=29.3
Q ss_pred CCCcEEEECC-ChHHHHHHHHHHHCCCceEEEccCC
Q 009897 29 MERKIAIIGA-GVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 29 ~~~~v~IIGa-G~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
|.++|+|.|| |..|...+..|+++|++|++++++.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR 36 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCC
Confidence 3568999998 9999999999999999999998753
No 478
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.88 E-value=0.21 Score=45.96 Aligned_cols=33 Identities=18% Similarity=0.140 Sum_probs=29.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
..+|+|||+|..|...|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4689999999999999999999999 99999853
No 479
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.87 E-value=0.48 Score=45.71 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHC--CCceEEEccCC
Q 009897 32 KIAIIGAGVSGLLACKYTLEN--GFKPIVFEARS 63 (523)
Q Consensus 32 ~v~IIGaG~aGl~aA~~l~~~--g~~v~v~e~~~ 63 (523)
+|+|||+|..|...|..|++. |.+|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999985 68999999853
No 480
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=87.86 E-value=0.52 Score=45.92 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=30.8
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 30 ERKIAIIGA-GVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGa-G~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
.++|+|.|| |..|...+..|+++|++|+++++...
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 478999999 99999999999999999999998653
No 481
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=87.82 E-value=0.4 Score=40.89 Aligned_cols=39 Identities=10% Similarity=0.090 Sum_probs=32.0
Q ss_pred hhcCCCEEEEEcCCCCHHHHHHHHHHhcCCccCEEEEEeece
Q 009897 223 ELINGKRVTVIGFQKSAVDVAAEVANRNGVRYPCTLLFKTVH 264 (523)
Q Consensus 223 ~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~Vt~~~r~~~ 264 (523)
+...+++|+|+|+|..|..++..|...+. +|+++.|++.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~---~V~vid~~~~ 53 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH---SVVVVDKNEY 53 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCGG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC---eEEEEECCHH
Confidence 44568899999999999999999998764 4999988754
No 482
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=87.82 E-value=0.4 Score=45.43 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=30.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
.++|+|||+|-.|.++|..|.+.|.+|++++++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 368999999999999999999999999999885
No 483
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=87.76 E-value=0.39 Score=48.18 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
.++|+|||.|..|..+|..|+..|.+|+++|++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999999999999999999999999999975
No 484
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=87.74 E-value=0.65 Score=46.91 Aligned_cols=35 Identities=17% Similarity=0.409 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARSG 64 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~~ 64 (523)
.++|+|||+|..|...+..+.+.|++|+++|..+.
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 47899999999999999999999999999987543
No 485
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=87.71 E-value=0.51 Score=45.93 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~ 62 (523)
..+|+|||+|-.|..+|+.|...|+ +++|+|..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 3789999999999999999999998 69999875
No 486
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.65 E-value=0.55 Score=48.25 Aligned_cols=33 Identities=27% Similarity=0.332 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
.+|.|||.|.-|...|..|++.|++|++++++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999875
No 487
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=87.65 E-value=0.55 Score=43.84 Aligned_cols=31 Identities=19% Similarity=0.245 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHHCCC-ceEEEccC
Q 009897 32 KIAIIGAGVSGLLACKYTLENGF-KPIVFEAR 62 (523)
Q Consensus 32 ~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~ 62 (523)
+|+|||+|-+|.+++..|.+.|. +|+|++|+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 89999999999999999999998 89999985
No 488
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=87.62 E-value=0.48 Score=45.17 Aligned_cols=32 Identities=22% Similarity=0.461 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 32 KIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 32 ~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
+|.|||+|.-|...|..|.+.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998853
No 489
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=87.55 E-value=0.5 Score=45.64 Aligned_cols=33 Identities=24% Similarity=0.454 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~ 62 (523)
.++++|+|+|-+|.++|..|++.|. +|+|+.|+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 4789999999999999999999998 79999885
No 490
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.53 E-value=0.55 Score=48.25 Aligned_cols=34 Identities=12% Similarity=0.315 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCceEEEccCC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGFKPIVFEARS 63 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~~ 63 (523)
..+|.|||+|.-|...|..|.+.|++|++++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3689999999999999999999999999999853
No 491
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=87.51 E-value=0.54 Score=45.56 Aligned_cols=32 Identities=28% Similarity=0.305 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--ceEEEccC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGF--KPIVFEAR 62 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~--~v~v~e~~ 62 (523)
.+|+|||+|..|.+.|..|+..++ +++++|..
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 589999999999999999999987 89999975
No 492
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.50 E-value=0.51 Score=44.54 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHCCCceEEEccC
Q 009897 32 KIAIIGAGVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 32 ~v~IIGaG~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
+|.|||+|.-|.+.|..|.+.|++|++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 6999999999999999999999999999875
No 493
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=87.49 E-value=0.3 Score=49.02 Aligned_cols=30 Identities=17% Similarity=0.275 Sum_probs=28.0
Q ss_pred CcEEEECCChHHHHHHHHHHH-CCCceEEEc
Q 009897 31 RKIAIIGAGVSGLLACKYTLE-NGFKPIVFE 60 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~-~g~~v~v~e 60 (523)
.+|+|||+|.-|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 479999999999999999988 599999998
No 494
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.47 E-value=0.54 Score=42.45 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=29.2
Q ss_pred cEEEECC-ChHHHHHHHHHHHCCCceEEEccC
Q 009897 32 KIAIIGA-GVSGLLACKYTLENGFKPIVFEAR 62 (523)
Q Consensus 32 ~v~IIGa-G~aGl~aA~~l~~~g~~v~v~e~~ 62 (523)
+|+|+|| |..|...+..|+++|.+|+++.|+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 5999998 999999999999999999999885
No 495
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=87.46 E-value=0.54 Score=44.41 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~ 62 (523)
.++++|||+|-+|.++|..|.+.|. +|+|+.|+
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4789999999999999999999997 89999884
No 496
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=87.43 E-value=0.46 Score=45.11 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~ 62 (523)
.++++|||+|-+|.+++..|.+.|. +|+|+.|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4789999999999999999999998 89999885
No 497
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=87.42 E-value=0.53 Score=44.79 Aligned_cols=33 Identities=21% Similarity=0.214 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~ 62 (523)
.++++|+|+|-+|.+++..|.+.|. +|+|++|+
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 4789999999999999999999999 69999884
No 498
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=87.26 E-value=0.5 Score=44.10 Aligned_cols=33 Identities=24% Similarity=0.382 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-ceEEEccC
Q 009897 30 ERKIAIIGAGVSGLLACKYTLENGF-KPIVFEAR 62 (523)
Q Consensus 30 ~~~v~IIGaG~aGl~aA~~l~~~g~-~v~v~e~~ 62 (523)
..+|+|||+|-.|..+|+.|.+.|+ +++|+|.+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3689999999999999999999998 79999875
No 499
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.24 E-value=0.54 Score=44.44 Aligned_cols=32 Identities=25% Similarity=0.399 Sum_probs=29.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--ceEEEccC
Q 009897 31 RKIAIIGAGVSGLLACKYTLENGF--KPIVFEAR 62 (523)
Q Consensus 31 ~~v~IIGaG~aGl~aA~~l~~~g~--~v~v~e~~ 62 (523)
++|.|||+|.-|.+.|..|.+.|+ +|++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 479999999999999999999998 89999875
No 500
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=87.23 E-value=0.61 Score=44.36 Aligned_cols=35 Identities=17% Similarity=0.340 Sum_probs=31.6
Q ss_pred cEEEECC-ChHHHHHHHHHHHCCCceEEEccCCCCC
Q 009897 32 KIAIIGA-GVSGLLACKYTLENGFKPIVFEARSGIG 66 (523)
Q Consensus 32 ~v~IIGa-G~aGl~aA~~l~~~g~~v~v~e~~~~~G 66 (523)
+|+|.|| |..|-..+..|.++|++|+++.|++..+
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~ 37 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG 37 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC
Confidence 6999998 9999999999999999999999876543
Done!