BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009899
(523 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 210/491 (42%), Gaps = 39/491 (7%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ G K P WP+IGH+ L + PHLAL ++ +YG + IRIG P +V+S
Sbjct: 3 KKTSSKGLKNPPGPWGWPLIGHMLTLG--KNPHLALSRMSQQYGDVLQIRIGSTPVVVLS 60
Query: 88 SWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNA-YWREMRKITAXXXXXXX 146
+ ++ + D RP L L+ N + FSP + W R++
Sbjct: 61 GLDTIRQALVRQGDDFKGRPDLYTFTLIS-NGQSMSFSPDSGPVWAARRRLAQNGLKSFS 119
Query: 147 XXXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLN---------LNVIL 197
+ ++ + +K+ L E+ G N NVI
Sbjct: 120 IASDPASSTSCYLEEHV-------SKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVIC 172
Query: 198 MMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKK 257
+ G+RY +++ E+ NF + G D +P L +L A K
Sbjct: 173 AICFGRRY-----DHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSL-NAFKD 226
Query: 258 TAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLL------SVLEGEGVDLSDFDVDTVI 311
++ S +++ ++EH + E G D+ D L+ + E V LSD + ++
Sbjct: 227 LNEKFYSFMQKMVKEHYKTFEKGHIRDI--TDSLIEHCQEKQLDENANVQLSDEKIINIV 284
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ + DT T ++W+L K+++ELD+V+G+ R SD L Y
Sbjct: 285 ----LDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPY 340
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEF 431
++A I ET R P T D ++ +++PKG + +N W++ D ++W +P EF
Sbjct: 341 MEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEF 400
Query: 432 KPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSXXXXXXXXXXXDISTPGEA 491
PERFLT +D K +++ FG G+R C G + A + S P
Sbjct: 401 LPERFLTPDGAID-KVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGV 459
Query: 492 WVDMTGTAGLT 502
VDMT GLT
Sbjct: 460 KVDMTPIYGLT 470
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 190/470 (40%), Gaps = 13/470 (2%)
Query: 35 KKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKE 94
K PPE G WP++GH+ L + PHLAL ++ +YG + IRIG P LV+S + ++
Sbjct: 16 KSPPEPWG-WPLLGHVLTLG--KNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQ 72
Query: 95 LFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITAXXXXXXXXXXXXKHI 154
+ D RP L L+ + + W R++
Sbjct: 73 ALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASS 132
Query: 155 RATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVI-LMMIAGKRYFGARAEND 213
+ ++ + + K + E L+ F N V+ + + G FG
Sbjct: 133 SSCYLEEHVSKEAKALISRLQE----LMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPES 188
Query: 214 ETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEH 273
E+ F D P L +L ++ K + +++ ++EH
Sbjct: 189 SDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQR-FKAFNQRFLWFLQKTVQEH 247
Query: 274 RRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGAT-DTTTVNLTW 332
+ + + D I L +G S + + I GA DT T ++W
Sbjct: 248 YQDFDKNSVRD---ITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISW 304
Query: 333 ALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGAR 392
+L K++KELD+V+G+ER SD +L YL+A I ET R P
Sbjct: 305 SLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPH 364
Query: 393 QFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFEL 452
T D T+ +++PK + +N W++ DP +W DP EF+PERFLTA K ++
Sbjct: 365 STTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKM 424
Query: 453 LPFGGGRRACPGISFALQMSXXXXXXXXXXXDISTPGEAWVDMTGTAGLT 502
+ FG G+R C G A + S P VD+T GLT
Sbjct: 425 MLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLT 474
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 198/449 (44%), Gaps = 32/449 (7%)
Query: 33 TGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMA 92
TG K P++ P++G L L H L KYGP++S+R+G ++V ++A
Sbjct: 5 TGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLA 64
Query: 93 KELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITAXXXXXXXXXXXXK 152
KE+ K D S RP++ + +N F+ A+W+ R++
Sbjct: 65 KEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATF---------- 114
Query: 153 HIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMM--IAGKRYFGARA 210
A DG+ +++ KI ++ + +L D++ V + + + F
Sbjct: 115 ---ALFKDGD-QKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSY 170
Query: 211 ENDETE---VRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIE 267
+N + E ++ Y I + + D +P+L EK +K K + L+
Sbjct: 171 KNGDPELNVIQNYNEGIIDNLSKDSLV---DLVPWLKIFPNKTLEK-LKSHVKIRNDLLN 226
Query: 268 EWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKA-----TTMTIIVGA 322
+ +E ++ K S + ++ +D L+ + D D+ + + TT+ I GA
Sbjct: 227 KILENYKEKFRSDSITNM--LDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGA 284
Query: 323 -TDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLR 381
+TTT + W L+ K+ +E+D VG R SD +L+ L+A I+E LR
Sbjct: 285 GVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLR 344
Query: 382 LYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHK 441
L P P+ + D ++ E+ V KGT +++NLW L + + W P +F PERFL
Sbjct: 345 LRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNP-A 403
Query: 442 DVDVKGQHFELLPFGGGRRACPGISFALQ 470
+ LPFG G R+C G A Q
Sbjct: 404 GTQLISPSVSYLPFGAGPRSCIGEILARQ 432
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 185/446 (41%), Gaps = 25/446 (5%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK P A WP+IG+ + Q HL+ LA +YG +F IR+G P +V++
Sbjct: 3 KKTSSKGKPPGPFA--WPLIGNAAAVG--QAAHLSFARLARRYGDVFQIRLGSCPIVVLN 58
Query: 88 SWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKIT-AXXXXXXX 146
+ + + RP +++ + F Y+ +W+ R+ +
Sbjct: 59 GERAIHQALVQQGSAFADRPSFASFRVVSGGRS-MAFGHYSEHWKVQRRAAHSMMRNFFT 117
Query: 147 XXXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYF 206
+ + V E +E+ + + +D L+ + NV+ + F
Sbjct: 118 RQPRSRQVLEGHVLSEARELVALLVR--GSADGAFLDPRPLTVVAVANVMSAVC-----F 170
Query: 207 GARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLD--IGGYEKAMKKTAKELDS 264
G R +D+ E R + F G + D +P+L + + + ++ + +
Sbjct: 171 GCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSN 230
Query: 265 LIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSD-----FDVDTVIKATTMTII 319
I + H GA D +D + E + S D++ V T+T I
Sbjct: 231 FILDKFLRHCESLRPGA-APRDMMDAFILSAEKKAAGDSHGGGARLDLENV--PATITDI 287
Query: 320 VGAT-DTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKE 378
GA+ DT + L W L +V+ ELD VVG++RL C D L Y+ A + E
Sbjct: 288 FGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYE 347
Query: 379 TLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLT 438
+R P+ T + +V YH+PK T + +N W + DP W +P F P RFL
Sbjct: 348 AMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLD 407
Query: 439 AHKDVDVKGQHFELLPFGGGRRACPG 464
++ K ++ F G+R C G
Sbjct: 408 KDGLIN-KDLTSRVMIFSVGKRRCIG 432
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/482 (23%), Positives = 207/482 (42%), Gaps = 47/482 (9%)
Query: 48 GHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRP 107
G LHLL P LP + L +L K GP++ +R+G+ +V++S +E + VD + RP
Sbjct: 36 GFLHLLQ-PNLP-IHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRP 93
Query: 108 KLTVGKLLGHNYANFGFSPYNAYWREMRKITAXXXXXXXXXXXXKHIRATEVDGEIKEIY 167
++ KL+ + Y+ W+ +K+T + ++ + ++
Sbjct: 94 QIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTR---------SSMEPWVDQLT 144
Query: 168 KIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNF 227
+ + ++ + ++K F L ++I + G + ++T V + +++
Sbjct: 145 QEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNK--------EDTLVHAFHDCVQDL 196
Query: 228 FLLGGVFLVR--DALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDL 285
+ ++ D +PFL + G + +K+ + D ++E+ + H+ +G D+
Sbjct: 197 MKTWDHWSIQILDMVPFLRFFPNPGLWR-LKQAIENRDHMVEKQLRRHKESMVAGQWRDM 255
Query: 286 DFIDVLLS------VLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXX 339
D +L V EG G L + + + + +G T+TT L+WA++
Sbjct: 256 --TDYMLQGVGRQRVEEGPGQLLEGH-----VHMSVVDLFIGGTETTASTLSWAVAFLLH 308
Query: 340 XXXXXXKVKKELDSVVG---KERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTE 396
++++ELD +G + D +L L A I E LRL P PLA + T
Sbjct: 309 HPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTR 368
Query: 397 DCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFG 456
++ Y +P+G ++ NL D VW P EF+P+RFL G + L FG
Sbjct: 369 PSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEP-------GANPSALAFG 421
Query: 457 GGRRACPGISFA-LQMSXXXXXXXXXXXDISTPGEAWVDMTGTAGL-TNIRATPLEILLK 514
G R C G S A L++ + P A + N++ P ++ L+
Sbjct: 422 CGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQPFQVRLQ 481
Query: 515 PR 516
PR
Sbjct: 482 PR 483
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 198/447 (44%), Gaps = 35/447 (7%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK PP +P+IG++ + + +L ++ YGP+F++ +G+ P +V+
Sbjct: 3 KKTSSKGKLPP-GPTPFPIIGNILQIDAKDISK-SLTKFSECYGPVFTVYLGMKPTVVLH 60
Query: 88 SWEMAKELFTKHDVDISSRPKL----TVGKLLGHNYANFGFSPYNAYWREMRKITAXXXX 143
+E KE + + R + V K LG ++N W+EMR+ +
Sbjct: 61 GYEAVKEALVDLGEEFAGRGSVPILEKVSKGLGIAFSN------AKTWKEMRRFSLMTLR 114
Query: 144 XXXXXXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGK 203
+ ++ I+E + ++ +++ + G NVI +I
Sbjct: 115 NFG-------MGKRSIEDRIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHN 167
Query: 204 RYFGARAENDETEVRRYRAAIRNFFLLGGVFL-VRDALPFLGWLD-IGGYEKAMKKTAKE 261
R+ DE ++ + N LLG +L V + P L LD G K + K A
Sbjct: 168 RF----DYKDEEFLKLMESLHENVELLGTPWLQVYNNFPAL--LDYFPGIHKTLLKNADY 221
Query: 262 LDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVG 321
+ + I E ++EH++ + N DFID L +E E + +F +++++ A + +
Sbjct: 222 IKNFIMEKVKEHQKLLD--VNNPRDFIDCFLIKMEQE--NNLEFTLESLVIAVS-DLFGA 276
Query: 322 ATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLR 381
T+TT+ L ++L +V++E++ V+G+ R C D ++ Y AVI E R
Sbjct: 277 GTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQR 336
Query: 382 LYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHK 441
P T D Y +PKGT ++ +L + D + + +P F P FL
Sbjct: 337 FIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESG 396
Query: 442 DVDVKGQHFELLPFGGGRRACPGISFA 468
+ K +F +PF G+R C G A
Sbjct: 397 NFK-KSDYF--MPFSAGKRMCVGEGLA 420
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 190/447 (42%), Gaps = 32/447 (7%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK PP P+IG++ + + + + YGP+F++ G++P +V
Sbjct: 3 KKTSSKGKLPP-GPTPLPIIGNMLQIDVKDICK-SFTNFSKVYGPVFTVYFGMNPIVVFH 60
Query: 88 SWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITAXXXXXXXX 147
+E KE + + S R + + + S W+E+R+ +
Sbjct: 61 GYEAVKEALIDNGEEFSGRGNSPISQRITKGLG--IISSNGKRWKEIRRFSLTTLRNFGM 118
Query: 148 XXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFG 207
R E + E ++ K + D + G NVI ++ KR F
Sbjct: 119 GKRSIEDRVQEEAHCLVE--ELRKTKASPCDPTFI-----LGCAPCNVICSVVFQKR-FD 170
Query: 208 ARAENDETEVRRYRAAIRNFFLLGGVFL-VRDALPFLGWLDIGGYEKAMKKTAKELDSLI 266
+ +N T ++R+ NF +L ++ V + P L G + K +K A L
Sbjct: 171 YKDQNFLTLMKRFN---ENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVA-----LT 222
Query: 267 EEWIEEHRRKKESGANLDL----DFIDVLLSVLEGEGVDL-SDFDVDTVIKATTMTIIVG 321
+I E + KE A+LD+ DFID L +E E + S+F+++ ++ T + V
Sbjct: 223 RSYIRE--KVKEHQASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLV-GTVADLFVA 279
Query: 322 ATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLR 381
T+TT+ L + L KV++E+D V+G+ R C D + Y AV+ E R
Sbjct: 280 GTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQR 339
Query: 382 LYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHK 441
P T D Y +PKGT ++ L + D + + +P F P FL +
Sbjct: 340 YSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNG 399
Query: 442 DVDVKGQHFELLPFGGGRRACPGISFA 468
+ K +F +PF G+R C G A
Sbjct: 400 NFK-KSDYF--MPFSAGKRICAGEGLA 423
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 184/459 (40%), Gaps = 33/459 (7%)
Query: 52 LLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKL-- 109
L A +LPH+ + + YG +FS+ +G +V++ +++ KE + RP L
Sbjct: 29 LAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88
Query: 110 -----TVGKLLGHNYANFGFSPYNAYWREMRKITAXXXXXXXXXXXXKHIRATEVDGEIK 164
+G LL S Y W + R++ + +I
Sbjct: 89 FMKMTKMGGLLN--------SRYGRGWVDHRRLAVNSFRYFGYG-------QKSFESKIL 133
Query: 165 EIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAI 224
E K + + K+ + N+ ++I G+R+ + D + +
Sbjct: 134 EETKFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERF--TYEDTDFQHMIELFSEN 191
Query: 225 RNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLD 284
VFL +A P++G L G +++ + A D + IE+ ++ L
Sbjct: 192 VELAASASVFLY-NAFPWIGILPFGKHQQLFRNAAVVYD-FLSRLIEKASVNRK--PQLP 247
Query: 285 LDFIDVLLSVL-EGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXX 343
F+D L + +G+ S F + +I + II G T+TTT L WA+
Sbjct: 248 QHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAG-TETTTNVLRWAILFMALYPNI 306
Query: 344 XXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEY 403
+V+KE+D ++G D K+ Y +AV+ E LR PL +ED V Y
Sbjct: 307 QGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGY 366
Query: 404 HVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACP 463
+PKGT ++ NL+ + D + W DP F PERFL + K L+PF GRR C
Sbjct: 367 SIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEA---LVPFSLGRRHCL 423
Query: 464 GISFALQMSXXXXXXXXXXXDISTPGEAWVDMTGTAGLT 502
G A + P E D+ G+T
Sbjct: 424 GEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMT 462
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 184/459 (40%), Gaps = 33/459 (7%)
Query: 52 LLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKL-- 109
L A +LPH+ + + YG +FS+ +G +V++ +++ KE + RP L
Sbjct: 29 LAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88
Query: 110 -----TVGKLLGHNYANFGFSPYNAYWREMRKITAXXXXXXXXXXXXKHIRATEVDGEIK 164
+G LL S Y W + R++ + +I
Sbjct: 89 FMKMTKMGGLLN--------SRYGRGWVDHRRLAVNSFRYFGYG-------QKSFESKIL 133
Query: 165 EIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAI 224
E K + + K+ + N+ ++I G+R+ + D + +
Sbjct: 134 EETKFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERF--TYEDTDFQHMIELFSEN 191
Query: 225 RNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLD 284
VFL +A P++G L G +++ + A D + IE+ ++ L
Sbjct: 192 VELAASASVFLY-NAFPWIGILPFGKHQQLFRNAAVVYD-FLSRLIEKASVNRK--PQLP 247
Query: 285 LDFIDVLLSVL-EGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXX 343
F+D L + +G+ S F + +I + II G T+TTT L WA+
Sbjct: 248 QHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAG-TETTTNVLRWAILFMALYPNI 306
Query: 344 XXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEY 403
+V+KE+D ++G D K+ Y +AV+ E LR PL +ED V Y
Sbjct: 307 QGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGY 366
Query: 404 HVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACP 463
+PKGT ++ NL+ + D + W DP F PERFL + K L+PF GRR C
Sbjct: 367 SIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKE---ALVPFSLGRRHCL 423
Query: 464 GISFALQMSXXXXXXXXXXXDISTPGEAWVDMTGTAGLT 502
G A + P E D+ G+T
Sbjct: 424 GEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMT 462
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 165/408 (40%), Gaps = 24/408 (5%)
Query: 66 LADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFG-- 123
L ++G +FS+++ P +V++ +E H D + RP + + ++LG + G
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98
Query: 124 FSPYNAYWREMRKITAXXXXXXXXXXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLE 183
+ Y WRE R+ + TE + + + + + +L +
Sbjct: 99 LARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDK 158
Query: 184 MKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFL--VRDALP 241
NVI + G+R+ E D+ R + FL V +A+P
Sbjct: 159 AVS-------NVIASLTCGRRF-----EYDDPRFLRLLDLAQEGLKEESGFLREVLNAVP 206
Query: 242 FLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLE-GEGV 300
L L I + + K + ++E + EHR + A D + L+ +E +G
Sbjct: 207 VL--LHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDP-AQPPRDLTEAFLAEMEKAKGN 263
Query: 301 DLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERL 360
S F+ D ++ + TT+ L W L +V++E+D V+G+ R
Sbjct: 264 PESSFN-DENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRR 322
Query: 361 LCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQT 420
D + Y AVI E R PL + D V + +PKGT L+ NL +
Sbjct: 323 PEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLK 382
Query: 421 DPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
D VW P F PE FL A VK + F LPF GRRAC G A
Sbjct: 383 DEAVWEKPFRFHPEHFLDAQGHF-VKPEAF--LPFSAGRRACLGEPLA 427
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 186/445 (41%), Gaps = 29/445 (6%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK PP P+IG+L L +P + LA ++GP+F++ +G +V+
Sbjct: 3 KKTSSKGKLPP-GPFPLPIIGNLFQLELKNIPK-SFTRLAQRFGPVFTLYVGSQRMVVMH 60
Query: 88 SWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNA-YWREMRKITAXXXXXXX 146
++ KE + + S R L H + + G N W+++R+ +
Sbjct: 61 GYKAVKEALLDYKDEFSGRGDLPAF----HAHRDRGIIFNNGPTWKDIRRFS---LTTLR 113
Query: 147 XXXXXKHIRATEVDGEIKEIYKIWTKKKNES-DQILLEMKKWFGDLNLNVILMMIAGKRY 205
K + + E + + K + + D L G NVI ++ K +
Sbjct: 114 NYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFL-----IGCAPCNVIADILFRKHF 168
Query: 206 FGARAENDETEVRRYRAAIRNFFLLGGVFL-VRDALP-FLGWLDIGGYEKAMKKTAKELD 263
NDE +R NF LL +L + + P FL +L G + K +K A E+
Sbjct: 169 ----DYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP-GSHRKVIKNVA-EVK 222
Query: 264 SLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGAT 323
+ E ++EH + + N D D LL +E E I T + T
Sbjct: 223 EYVSERVKEHHQSLD--PNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGT 280
Query: 324 DTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLY 383
+TT+ L + L K+ +E+D V+G R+ D +++ Y+ AV+ E R
Sbjct: 281 ETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFI 340
Query: 384 PAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDV 443
P + T D Y +PKGT +V L + D + + DP +FKPE FL +
Sbjct: 341 TLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKF 400
Query: 444 DVKGQHFELLPFGGGRRACPGISFA 468
+F+ PF G+R C G A
Sbjct: 401 KY-SDYFK--PFSTGKRVCAGEGLA 422
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 191/444 (43%), Gaps = 32/444 (7%)
Query: 31 SNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWE 90
S GK PP P+IG++ L G + +L L+ YGP+F++ G+ P +V+ +E
Sbjct: 7 SGRGKLPP-GPTPLPVIGNI-LQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYE 64
Query: 91 MAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFS---PYNAYWREMRKITAXXXXXXXX 147
KE + S R + + AN GF W+E+R+ +
Sbjct: 65 AVKEALIDLGEEFSGRGIFPLAE-----RANRGFGIVFSNGKKWKEIRRFSLMTLRNFG- 118
Query: 148 XXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFG 207
+ ++ ++E + ++ ++ + G NVI +I KR+
Sbjct: 119 ------MGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRF-- 170
Query: 208 ARAENDETEVRRYRAAIRNFFLLGG--VFLVRDALPFLGWLDIGGYEKAMKKTAKELDSL 265
D+ + N +L + + + P + + G + K +K A + S
Sbjct: 171 --DYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP-GTHNKLLKNVAF-MKSY 226
Query: 266 IEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDL-SDFDVDTVIKATTMTIIVGATD 324
I E ++EH+ + N DFID L +E E + S+F +++ ++ T + + T+
Sbjct: 227 ILEKVKEHQESMD--MNNPQDFIDCFLMKMEKEKHNQPSEFTIES-LENTAVDLFGAGTE 283
Query: 325 TTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYP 384
TT+ L +AL KV++E++ V+G+ R C D + Y AV+ E R
Sbjct: 284 TTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYID 343
Query: 385 AGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVD 444
P + T D Y +PKGT ++++L + D + + +P F P FL +
Sbjct: 344 LLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFK 403
Query: 445 VKGQHFELLPFGGGRRACPGISFA 468
K ++F +PF G+R C G + A
Sbjct: 404 -KSKYF--MPFSAGKRICVGEALA 424
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 193/446 (43%), Gaps = 31/446 (6%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ G+ P P+IG++ L G + +L L+ YGP+F++ G+ P +V+
Sbjct: 3 KKTSSKGRPP--GPTPLPVIGNI-LQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLH 59
Query: 88 SWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFS---PYNAYWREMRKITAXXXXX 144
+E KE + S R + + AN GF W+E+R+ +
Sbjct: 60 GYEAVKEALIDLGEEFSGRGIFPLAE-----RANRGFGIVFSNGKKWKEIRRFSLMTLRN 114
Query: 145 XXXXXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKR 204
+ ++ ++E + ++ ++ + G NVI +I KR
Sbjct: 115 FG-------MGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKR 167
Query: 205 YFGARAENDETEVRRYRAAIRNFFLLGGVFL-VRDALPFLGWLDIGGYEKAMKKTAKELD 263
+ D+ + N +L ++ V + P L G + K +K A +
Sbjct: 168 F----DYKDQQFLNLMEKLNENIEILSSPWIQVYNNFPALLDYFPGTHNKLLKNVAF-MK 222
Query: 264 SLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDL-SDFDVDTVIKATTMTIIVGA 322
S I E ++EH+ + N DFID L +E E + S+F +++ ++ T + +
Sbjct: 223 SYILEKVKEHQESMD--MNNPQDFIDCFLMKMEKEKHNQPSEFTIES-LENTAVDLFGAG 279
Query: 323 TDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRL 382
T+TT+ L +AL KV++E++ V+G+ R C D + Y AV+ E R
Sbjct: 280 TETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRY 339
Query: 383 YPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKD 442
P + T D Y +PKGT ++++L + D + + +P F P FL +
Sbjct: 340 IDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGN 399
Query: 443 VDVKGQHFELLPFGGGRRACPGISFA 468
K ++F +PF G+R C G + A
Sbjct: 400 FK-KSKYF--MPFSAGKRICVGEALA 422
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 163/408 (39%), Gaps = 24/408 (5%)
Query: 66 LADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFG-- 123
L ++G +FS+++ P +V++ +E H D + RP + + ++LG + G
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98
Query: 124 FSPYNAYWREMRKITAXXXXXXXXXXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLE 183
+ Y WRE R+ + TE + + + + + +L +
Sbjct: 99 LARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDK 158
Query: 184 MKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFL--VRDALP 241
NVI + G+R+ E D+ R + FL V +A+P
Sbjct: 159 AVS-------NVIASLTCGRRF-----EYDDPRFLRLLDLAQEGLKEESGFLREVLNAVP 206
Query: 242 FLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLE-GEGV 300
I + + K + ++E + EHR + A D + L+ +E +G
Sbjct: 207 VD--RHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDP-AQPPRDLTEAFLAEMEKAKGN 263
Query: 301 DLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERL 360
S F+ D ++ + TT+ L W L +V++E+D V+G+ R
Sbjct: 264 PESSFN-DENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRR 322
Query: 361 LCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQT 420
D + Y AVI E R PL + D V + +PKGT L+ NL +
Sbjct: 323 PEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLK 382
Query: 421 DPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
D VW P F PE FL A VK + F LPF GRRAC G A
Sbjct: 383 DEAVWEKPFRFHPEHFLDAQGHF-VKPEAF--LPFSAGRRACLGEPLA 427
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 188/451 (41%), Gaps = 40/451 (8%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK PP P++G+L + L L L +KYG +F++ +G P +V+
Sbjct: 3 KKTSSKGKLPP-GPSPLPVLGNLLQMDRKGLLRSFL-RLREKYGDVFTVYLGSRPVVVLC 60
Query: 88 SWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITAXXXXXXXX 147
+ +E S R K+ V + Y + WR +R+ +
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFG- 117
Query: 148 XXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFG 207
+ V+ I+E + ++ +S LL+ F + N+I ++ GKR+
Sbjct: 118 ------MGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF-- 169
Query: 208 ARAENDETEVR----RYRAAIRNFFLLGGVFLVRDALPFLGWLD-IGGYEKAMKKTAKEL 262
D +R +++ VF + F G+L G + + + +E+
Sbjct: 170 --DYKDPVFLRLLDLFFQSFSLISSFSSQVFEL-----FSGFLKYFPGTHRQIYRNLQEI 222
Query: 263 DSLIEEWIEEHRRKKESGANLD----LDFIDVLLSVLEGEGVD-LSDFDVDTVIKATTMT 317
++ I + +E+HR A LD DFIDV L +E + D S+F +I T ++
Sbjct: 223 NTFIGQSVEKHR------ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLI-LTVLS 275
Query: 318 IIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIK 377
+ T+TT+ L + +V+KE++ V+G R D K+ Y AVI
Sbjct: 276 LFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIH 335
Query: 378 ETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFL 437
E RL P T+D Y +PK T + L DPR + P F P FL
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
Query: 438 TAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
A+ + + + F +PF G+R C G A
Sbjct: 396 DANGALK-RNEGF--MPFSLGKRICAGEGIA 423
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 188/451 (41%), Gaps = 40/451 (8%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK PP P++G+L + L L L +KYG +F++ +G P +V+
Sbjct: 3 KKTSSKGKLPP-GPSPLPVLGNLLQMDRKGLLRSFL-RLREKYGDVFTVYLGSRPVVVLC 60
Query: 88 SWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITAXXXXXXXX 147
+ +E S R K+ V + Y + WR +R+ +
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFG- 117
Query: 148 XXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFG 207
+ V+ I+E + ++ +S LL+ F + N+I ++ GKR+
Sbjct: 118 ------MGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF-- 169
Query: 208 ARAENDETEVR----RYRAAIRNFFLLGGVFLVRDALPFLGWLD-IGGYEKAMKKTAKEL 262
D +R +++ VF + F G+L G + + + +E+
Sbjct: 170 --DYKDPVFLRLLDLFFQSFSLISSFSSQVFEL-----FSGFLKYFPGTHRQIYRNLQEI 222
Query: 263 DSLIEEWIEEHRRKKESGANLD----LDFIDVLLSVLEGEGVD-LSDFDVDTVIKATTMT 317
++ I + +E+HR A LD DFIDV L +E + D S+F +I T ++
Sbjct: 223 NTFIGQSVEKHR------ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLI-LTVLS 275
Query: 318 IIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIK 377
+ T+TT+ L + +V+KE++ V+G R D K+ Y AVI
Sbjct: 276 LFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIH 335
Query: 378 ETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFL 437
E RL P T+D Y +PK T + L DPR + P F P FL
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
Query: 438 TAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
A+ + + + F +PF G+R C G A
Sbjct: 396 DANGALK-RNEGF--MPFSLGKRICLGEGIA 423
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 188/451 (41%), Gaps = 40/451 (8%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK PP P++G+L + L L L +KYG +F++ +G P +V+
Sbjct: 3 KKTSSKGKLPP-GPSPLPVLGNLLQMDRKGLLRSFL-RLREKYGDVFTVYLGSRPVVVLC 60
Query: 88 SWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITAXXXXXXXX 147
+ +E S R K+ V + Y + WR +R+ +
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFG- 117
Query: 148 XXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFG 207
+ V+ I+E + ++ +S LL+ F + N+I ++ GKR+
Sbjct: 118 ------MGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF-- 169
Query: 208 ARAENDETEVR----RYRAAIRNFFLLGGVFLVRDALPFLGWLD-IGGYEKAMKKTAKEL 262
D +R +++ VF + F G+L G + + + +E+
Sbjct: 170 --DYKDPVFLRLLDLFFQSFSLISSFSSQVFEL-----FSGFLKYFPGTHRQIYRNLQEI 222
Query: 263 DSLIEEWIEEHRRKKESGANLD----LDFIDVLLSVLEGEGVD-LSDFDVDTVIKATTMT 317
++ I + +E+HR A LD DFIDV L +E + D S+F +I T ++
Sbjct: 223 NTFIGQSVEKHR------ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLI-LTVLS 275
Query: 318 IIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIK 377
+ T+TT+ L + +V+KE++ V+G R D K+ Y AVI
Sbjct: 276 LFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIH 335
Query: 378 ETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFL 437
E RL P T+D Y +PK T + L DPR + P F P FL
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
Query: 438 TAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
A+ + + + F +PF G+R C G A
Sbjct: 396 DANGALK-RNEGF--MPFSLGKRICLGEGIA 423
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 188/451 (41%), Gaps = 40/451 (8%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK PP P++G+L + L L L +KYG +F++ +G P +V+
Sbjct: 3 KKTSSKGKLPP-GPSPLPVLGNLLQMDRKGLLRSFL-RLREKYGDVFTVYLGSRPVVVLC 60
Query: 88 SWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITAXXXXXXXX 147
+ +E S R K+ V + Y + WR +R+ +
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFG- 117
Query: 148 XXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFG 207
+ V+ I+E + ++ +S LL+ F + N+I ++ GKR+
Sbjct: 118 ------MGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF-- 169
Query: 208 ARAENDETEVR----RYRAAIRNFFLLGGVFLVRDALPFLGWLD-IGGYEKAMKKTAKEL 262
D +R +++ VF + F G+L G + + + +E+
Sbjct: 170 --DYKDPVFLRLLDLFFQSFSLISSFSSQVFEL-----FSGFLKYFPGTHRQIYRNLQEI 222
Query: 263 DSLIEEWIEEHRRKKESGANLD----LDFIDVLLSVLEGEGVD-LSDFDVDTVIKATTMT 317
++ I + +E+HR A LD DFIDV L +E + D S+F +I T ++
Sbjct: 223 NTFIGQSVEKHR------ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLI-LTVLS 275
Query: 318 IIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIK 377
+ T+TT+ L + +V+KE++ V+G R D K+ Y AVI
Sbjct: 276 LFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIH 335
Query: 378 ETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFL 437
E RL P T+D Y +PK T + L DPR + P F P FL
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
Query: 438 TAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
A+ + + + F +PF G+R C G A
Sbjct: 396 DANGALK-RNEGF--MPFSLGKRICLGEGIA 423
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 190/452 (42%), Gaps = 42/452 (9%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK PP P++G+L + L L L +KYG +F++ +G P +V+
Sbjct: 3 KKTSSKGKLPP-GPSPLPVLGNLLQMDRKGLLRSFL-RLREKYGDVFTVYLGSRPVVVLC 60
Query: 88 SWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNA-YWREMRKITAXXXXXXX 146
+ +E S R K+ V + + +G N WR +R+ +
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPI---FQGYGVIFANGERWRALRRFSLATMRDFG 117
Query: 147 XXXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYF 206
+ V+ I+E + ++ +S LL+ F + N+I ++ GKR+
Sbjct: 118 -------MGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF- 169
Query: 207 GARAENDETEVR----RYRAAIRNFFLLGGVFLVRDALPFLGWL-DIGGYEKAMKKTAKE 261
D +R +++ VF + F G+L G + + + +E
Sbjct: 170 ---DYKDPVFLRLLDLFFQSFSLISSFSSQVFEL-----FSGFLKHFPGTHRQIYRNLQE 221
Query: 262 LDSLIEEWIEEHRRKKESGANLD----LDFIDVLLSVLEGEGVD-LSDFDVDTVIKATTM 316
+++ I + +E+HR A LD DFIDV L +E + D S+F +I T +
Sbjct: 222 INTFIGQSVEKHR------ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLI-LTVL 274
Query: 317 TIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVI 376
++ T+TT+ L + +V+KE++ V+G R D K+ Y AVI
Sbjct: 275 SLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVI 334
Query: 377 KETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERF 436
E RL P T+D Y +PK T + L DPR + P F P F
Sbjct: 335 HEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF 394
Query: 437 LTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
L A+ + + + F +PF G+R C G A
Sbjct: 395 LDANGALK-RNEGF--MPFSLGKRICLGEGIA 423
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 166/398 (41%), Gaps = 20/398 (5%)
Query: 68 DKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPY 127
+KYG +F++ +G P +++ E +E S R K+ + Y F+
Sbjct: 41 EKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVI-FANG 99
Query: 128 NAYWREMRKITAXXXXXXXXXXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKW 187
N W+ +R+ + + V+ I+E + ++ +S L++
Sbjct: 100 NR-WKVLRRFSVTTMRDFG-------MGKRSVEERIQEEAQCLIEELRKSKGALMDPTFL 151
Query: 188 FGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWL- 246
F + N+I ++ GKR+ D+ ++ + F L+ VF L F G+L
Sbjct: 152 FQSITANIICSIVFGKRF----HYQDQEFLKMLNLFYQTFSLISSVFGQLFEL-FSGFLK 206
Query: 247 DIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFD 306
G + + K +E+++ I +E+HR + A DL ID L +E E +
Sbjct: 207 HFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDL--IDTYLLHMEKEKSNAHSEF 264
Query: 307 VDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDI 366
+ T+++ T+TT+ L + +V +E++ V+G R D
Sbjct: 265 SHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDR 324
Query: 367 EKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWS 426
K+ Y +AVI E R P+ T+ + Y +PK T + L L DP +
Sbjct: 325 AKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFE 384
Query: 427 DPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPG 464
P F P+ FL A+ + K + F +PF G+R C G
Sbjct: 385 KPDAFNPDHFLDANGALK-KTEAF--IPFSLGKRICLG 419
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 187/443 (42%), Gaps = 30/443 (6%)
Query: 31 SNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWE 90
S GK PP P+IG++ + + +L L+ YGP+F++ G+ +V+ +E
Sbjct: 7 SGRGKLPP-GPTPLPVIGNILQIDIKDVSK-SLTNLSKIYGPVFTLYFGLERMVVLHGYE 64
Query: 91 MAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFS---PYNAYWREMRKITAXXXXXXXX 147
+ KE + S R + + AN GF W+E+R+ +
Sbjct: 65 VVKEALIDLGEEFSGRGHFPLAE-----RANRGFGIVFSNGKRWKEIRRFSLMTLRNFG- 118
Query: 148 XXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFG 207
+ ++ ++E + ++ ++ + G NVI +I KR+
Sbjct: 119 ------MGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQKRF-- 170
Query: 208 ARAENDETEVRRYRAAIRNFFLLGGVFL-VRDALPFLGWLDIGGYEKAMKKTAKELDSLI 266
D+ + N ++ ++ + + P + G + K +K A ++S I
Sbjct: 171 --DYKDQQFLNLMEKLNENIRIVSTPWIQICNNFPTIIDYFPGTHNKLLKNLAF-MESDI 227
Query: 267 EEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDL-SDFDVDTVIKATTMTIIVGATDT 325
E ++EH+ + N DFID L +E E + S+F ++ ++ T ++ T+T
Sbjct: 228 LEKVKEHQESMD--INNPRDFIDCFLIKMEKEKQNQQSEFTIENLV-ITAADLLGAGTET 284
Query: 326 TTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPA 385
T+ L +AL KV++E++ VVG+ R C D + Y AV+ E R
Sbjct: 285 TSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDL 344
Query: 386 GPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDV 445
P + T D Y +PKGT ++ +L + D + + +P F P FL +
Sbjct: 345 IPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFK- 403
Query: 446 KGQHFELLPFGGGRRACPGISFA 468
K +F +PF G+R C G A
Sbjct: 404 KSNYF--MPFSAGKRICVGEGLA 424
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 262 LDSLIEEWIEEHRRKKESGANLDLDFID-VLLSVLEGEGVDLSDFDVDTVIKATTMTIIV 320
L+ I + +E ++R + N DFID L+ + E E ++F + ++ TT+ + V
Sbjct: 222 LEDFIAKKVEHNQRTLD--PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLV-MTTLQLFV 278
Query: 321 GATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETL 380
G T+T + L + KV +E+D V+GK R D K+ Y++AVI E
Sbjct: 279 GGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQ 338
Query: 381 RLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAH 440
R P++ AR+ +D ++ +PKGT + L + DP +S+P +F P+ FL
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE- 397
Query: 441 KDVDVKGQHFE---LLPFGGGRRACPGISFA 468
KGQ + +PF G+R C G A
Sbjct: 398 -----KGQFKKSDAFVPFSIGKRNCFGEGLA 423
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK PP P IG+ L Q+ + +L ++++YGP+F+I +G +V+
Sbjct: 3 KKTSSKGKLPP-GPTPLPFIGNYLQLNTEQM-YNSLMKISERYGPVFTIHLGPRRVVVLC 60
Query: 88 SWEMAKELFTKHDVDISSR 106
+ +E + S R
Sbjct: 61 GHDAVREALVDQAEEFSGR 79
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 262 LDSLIEEWIEEHRRKKESGANLDLDFID-VLLSVLEGEGVDLSDFDVDTVIKATTMTIIV 320
L+ I + +E ++R + N DFID L+ + E E ++F + ++ TT+ + +
Sbjct: 222 LEDFIAKKVEHNQRTLD--PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLV-MTTLNLFI 278
Query: 321 GATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETL 380
G T+T + L + KV +E+D V+GK R D K+ Y++AVI E
Sbjct: 279 GGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQ 338
Query: 381 RLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAH 440
R P++ AR+ +D ++ +PKGT + L + DP +S+P +F P+ FL
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE- 397
Query: 441 KDVDVKGQHFE---LLPFGGGRRACPGISFA 468
KGQ + +PF G+R C G A
Sbjct: 398 -----KGQFKKSDAFVPFSIGKRNCFGEGLA 423
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK PP P IG+ L Q+ + +L ++++YGP+F+I +G +V+
Sbjct: 3 KKTSSKGKLPP-GPTPLPFIGNYLQLNTEQM-YNSLMKISERYGPVFTIHLGPRRVVVLC 60
Query: 88 SWEMAKELFTKHDVDISSR 106
+ +E + S R
Sbjct: 61 GHDAVREALVDQAEEFSGR 79
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 13/223 (5%)
Query: 250 GYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFID-VLLSVLEGEGVDLSDFDVD 308
G ++ + + L+ I + +E ++R + N DFID L+ + E E ++F +
Sbjct: 210 GPQQQAFQCLQGLEDFIAKKVEHNQRTLD--PNSPRDFIDSFLIRMQEEEKNPNTEFYLK 267
Query: 309 TVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEK 368
++ TT+ + +G T+T + L + KV +E+D V+GK R D K
Sbjct: 268 NLV-MTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK 326
Query: 369 LVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDP 428
+ Y++AVI E R P++ AR+ +D ++ +PKGT + L + DP +S+P
Sbjct: 327 MPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNP 386
Query: 429 LEFKPERFLTAHKDVDVKGQHFE---LLPFGGGRRACPGISFA 468
+F P+ FL KGQ + +PF G+R C G A
Sbjct: 387 QDFNPQHFLNE------KGQFKKSDAFVPFSIGKRNCFGEGLA 423
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK PP P IG+ L Q+ + +L ++++YGP+F+I +G +V+
Sbjct: 3 KKTSSKGKLPP-GPTPLPFIGNYLQLNTEQM-YNSLMKISERYGPVFTIHLGPRRVVVLC 60
Query: 88 SWEMAKELFTKHDVDISSR 106
+ +E + S R
Sbjct: 61 GHDAVREALVDQAEEFSGR 79
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 262 LDSLIEEWIEEHRRKKESGANLDLDFID-VLLSVLEGEGVDLSDFDVDTVIKATTMTIIV 320
L+ I + +E ++R + N DFID L+ + E E ++F + ++ TT+ + +
Sbjct: 222 LEDFIAKKVEHNQRTLD--PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLV-MTTLQLFI 278
Query: 321 GATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETL 380
G T+T + L + KV +E+D V+GK R D K+ Y++AVI E
Sbjct: 279 GGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQ 338
Query: 381 RLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAH 440
R P++ AR+ +D ++ +PKGT + L + DP +S+P +F P+ FL
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE- 397
Query: 441 KDVDVKGQHFE---LLPFGGGRRACPGISFA 468
KGQ + +PF G+R C G A
Sbjct: 398 -----KGQFKKSDAFVPFSIGKRNCFGEGLA 423
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK PP P IG+ L Q+ + +L ++++YGP+F+I +G +V+
Sbjct: 3 KKTSSKGKLPP-GPTPLPFIGNYLQLNTEQM-YNSLMKISERYGPVFTIHLGPRRVVVLC 60
Query: 88 SWEMAKELFTKHDVDISSR 106
+ +E + S R
Sbjct: 61 GHDAVREALVDQAEEFSGR 79
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 13/223 (5%)
Query: 250 GYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFID-VLLSVLEGEGVDLSDFDVD 308
G ++ K + L+ I + +E ++R + N DFID L+ + E E ++F +
Sbjct: 210 GPQQQAFKELQGLEDFIAKKVEHNQRTLD--PNSPRDFIDSFLIRMQEEEKNPNTEFYLK 267
Query: 309 TVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEK 368
++ TT+ + T+T + L + KV +E+D V+GK R D K
Sbjct: 268 NLV-MTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK 326
Query: 369 LVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDP 428
+ Y +AVI E R P+ A + +D ++ +PKGT + L + DPR +S+P
Sbjct: 327 MPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNP 386
Query: 429 LEFKPERFLTAHKDVDVKGQHFE---LLPFGGGRRACPGISFA 468
+F P+ FL D KGQ + +PF G+R C G A
Sbjct: 387 RDFNPQHFL------DKKGQFKKSDAFVPFSIGKRYCFGEGLA 423
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK PP P IG+ L Q+ + +L ++++YGP+F+I +G +V+
Sbjct: 3 KKTSSKGKLPP-GPTPLPFIGNYLQLNTEQM-YNSLMKISERYGPVFTIHLGPRRVVVLC 60
Query: 88 SWEMAKELFTKHDVDISSR 106
+ KE + S R
Sbjct: 61 GHDAVKEALVDQAEEFSGR 79
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 262 LDSLIEEWIEEHRRKKESGANLDLDFID-VLLSVLEGEGVDLSDFDVDTVIKATTMTIIV 320
L+ I + +E ++R + N DFID L+ + E E ++F + ++ TT+ +
Sbjct: 222 LEDFIAKKVEHNQRTLD--PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLV-MTTLNLFF 278
Query: 321 GATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETL 380
T+T + L + KV +E+D V+GK R D K+ Y++AVI E
Sbjct: 279 AGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQ 338
Query: 381 RLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAH 440
R P+ AR+ +D ++ +PKGT + L + DP +S+P +F P+ FL
Sbjct: 339 RFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE- 397
Query: 441 KDVDVKGQHFE---LLPFGGGRRACPGISFA 468
KGQ + +PF G+R C G A
Sbjct: 398 -----KGQFKKSDAFVPFSIGKRNCFGEGLA 423
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVS 87
+K S+ GK PP P IG+ L Q+ + +L ++++YGP+F+I +G +V+
Sbjct: 3 KKTSSKGKLPP-GPTPLPFIGNYLQLNTEQM-YNSLMKISERYGPVFTIHLGPRRVVVLC 60
Query: 88 SWEMAKELFTKHDVDISSR 106
+ +E + S R
Sbjct: 61 GHDAVREALVDQAEEFSGR 79
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 171/421 (40%), Gaps = 58/421 (13%)
Query: 69 KYGPLFSIRIGVHPALVVSSWEMAKELFTK--HDVDISSRPKLTVGKLLGHNYANFGFS- 125
KYG ++ G P L ++ +M K + K + V + RP VG + S
Sbjct: 47 KYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVG------FMKSAISI 100
Query: 126 PYNAYWREMRKITAXXXXXXXXXXXXKHIRATEVDGEIKEIYKIWTK---------KKNE 176
+ W+ +R + + T G++KE+ I + ++
Sbjct: 101 AEDEEWKRLRSL----------------LSPTFTSGKLKEMVPIIAQYGDVLVRNLRREA 144
Query: 177 SDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLV 236
+ +K FG +++VI G D V + +R F L FL
Sbjct: 145 ETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPF-VENTKKLLR-FDFLDPFFLS 202
Query: 237 RDALPFL----GWLDIGGYEKA----MKKTAKELDSLIEEWIEEHRRKKESGANLDLDFI 288
PFL L+I + + ++K+ K + E ++HR +DF+
Sbjct: 203 ITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHR----------VDFL 252
Query: 289 DVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVK 348
+++ + + D + A ++ I +TT+ L++ + K++
Sbjct: 253 QLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQ 312
Query: 349 KELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKG 408
+E+D+V+ + + ++ YL V+ ETLRL+P + R +D + +PKG
Sbjct: 313 EEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDVEINGMFIPKG 371
Query: 409 TRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
+++ + L DP+ W++P +F PERF +KD + PFG G R C G+ FA
Sbjct: 372 VVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD---NIDPYIYTPFGSGPRNCIGMRFA 428
Query: 469 L 469
L
Sbjct: 429 L 429
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 171/421 (40%), Gaps = 58/421 (13%)
Query: 69 KYGPLFSIRIGVHPALVVSSWEMAKELFTK--HDVDISSRPKLTVGKLLGHNYANFGFS- 125
KYG ++ G P L ++ +M K + K + V + RP VG + S
Sbjct: 45 KYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVG------FMKSAISI 98
Query: 126 PYNAYWREMRKITAXXXXXXXXXXXXKHIRATEVDGEIKEIYKIWTK---------KKNE 176
+ W+ +R + + T G++KE+ I + ++
Sbjct: 99 AEDEEWKRLRSL----------------LSPTFTSGKLKEMVPIIAQYGDVLVRNLRREA 142
Query: 177 SDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLV 236
+ +K FG +++VI G D V + +R F L FL
Sbjct: 143 ETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPF-VENTKKLLR-FDFLDPFFLS 200
Query: 237 RDALPFL----GWLDIGGYEKA----MKKTAKELDSLIEEWIEEHRRKKESGANLDLDFI 288
PFL L+I + + ++K+ K + E ++HR +DF+
Sbjct: 201 ITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHR----------VDFL 250
Query: 289 DVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVK 348
+++ + + D + A ++ I +TT+ L++ + K++
Sbjct: 251 QLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQ 310
Query: 349 KELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKG 408
+E+D+V+ + + ++ YL V+ ETLRL+P + R +D + +PKG
Sbjct: 311 EEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDVEINGMFIPKG 369
Query: 409 TRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
+++ + L DP+ W++P +F PERF +KD + PFG G R C G+ FA
Sbjct: 370 VVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD---NIDPYIYTPFGSGPRNCIGMRFA 426
Query: 469 L 469
L
Sbjct: 427 L 427
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 171/421 (40%), Gaps = 58/421 (13%)
Query: 69 KYGPLFSIRIGVHPALVVSSWEMAKELFTK--HDVDISSRPKLTVGKLLGHNYANFGFS- 125
KYG ++ G P L ++ +M K + K + V + RP VG + S
Sbjct: 46 KYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVG------FMKSAISI 99
Query: 126 PYNAYWREMRKITAXXXXXXXXXXXXKHIRATEVDGEIKEIYKIWTK---------KKNE 176
+ W+ +R + + T G++KE+ I + ++
Sbjct: 100 AEDEEWKRLRSL----------------LSPTFTSGKLKEMVPIIAQYGDVLVRNLRREA 143
Query: 177 SDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLV 236
+ +K FG +++VI G D V + +R F L FL
Sbjct: 144 ETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPF-VENTKKLLR-FDFLDPFFLS 201
Query: 237 RDALPFL----GWLDIGGYEKA----MKKTAKELDSLIEEWIEEHRRKKESGANLDLDFI 288
PFL L+I + + ++K+ K + E ++HR +DF+
Sbjct: 202 ITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHR----------VDFL 251
Query: 289 DVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVK 348
+++ + + D + A ++ I +TT+ L++ + K++
Sbjct: 252 QLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQ 311
Query: 349 KELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKG 408
+E+D+V+ + + ++ YL V+ ETLRL+P + R +D + +PKG
Sbjct: 312 EEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDVEINGMFIPKG 370
Query: 409 TRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
+++ + L DP+ W++P +F PERF +KD + PFG G R C G+ FA
Sbjct: 371 VVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD---NIDPYIYTPFGSGPRNCIGMRFA 427
Query: 469 L 469
L
Sbjct: 428 L 428
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 196/493 (39%), Gaps = 62/493 (12%)
Query: 44 WPMIGHLHLL---AGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELF---T 97
WP++G L + G + H L KYG +F +++G ++ + S + + L+ +
Sbjct: 32 WPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTES 91
Query: 98 KHDVDISSRPKLTVGKLLGHNYANFGFSPYNAY-WREMRKITAXXXXXXXXXXXXKHIRA 156
H + +P H +G W+ +R K +
Sbjct: 92 AHPQRLEIKP---WKAYRDHRNEAYGLMILEGQEWQRVRS--------AFQKKLMKPVEI 140
Query: 157 TEVDGEIKEIYKIWTKKKNE-SDQ------ILLEMKKWFGDLNLNVILMMIAGKRYFGAR 209
++D +I E+ + ++ +E D+ + E+ KW + I +++ KR FG
Sbjct: 141 MKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKW----SFESICLVLYEKR-FGLL 195
Query: 210 AENDETEVRRYRAAIRNFFLLGGVFLV-----RDALPFLGWLDIGGYEKAMKKTAKELDS 264
+ E E + AI+ G +V L W + A K +
Sbjct: 196 QKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVW---QAHTLAWDTIFKSVKP 252
Query: 265 LIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATD 324
I+ ++ R ++ GA D L + + + + + + A + + A +
Sbjct: 253 CIDNRLQ--RYSQQPGA-------DFLCDIYQQDHLSKKE------LYAAVTELQLAAVE 297
Query: 325 TTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYP 384
TT +L W L ++ +E+ SV+ + D+ + YL+A +KE++RL P
Sbjct: 298 TTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTP 357
Query: 385 AGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVD 444
+ P R + + EY +PKGT L LN L + + D +F+PER+L K ++
Sbjct: 358 SVPFT-TRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKIN 416
Query: 445 VKGQHFELLPFGGGRRACPGISFA-LQMSXXXXXXXXXXXDISTPGEAWVDMTGTAGLTN 503
F LPFG G+R C G A LQ+ ++T E V+M L
Sbjct: 417 P----FAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEP-VEMLHLGILVP 471
Query: 504 IRATPLEILLKPR 516
R P I +PR
Sbjct: 472 SRELP--IAFRPR 482
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 161/408 (39%), Gaps = 38/408 (9%)
Query: 67 ADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSP 126
A KYGP+ + + +++V+S E K+ + S+ + + G G
Sbjct: 20 AKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVS 79
Query: 127 YNAY--WREMRKITAXXXXXXXXXXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEM 184
Y W + R++ + + + +++ +I K + + ++
Sbjct: 80 ECNYERWHKQRRVIDLAFSRSSLVSLMETF-----NEKAEQLVEILEAKADGQTPVSMQ- 133
Query: 185 KKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLG 244
D+ L M I K FG + A++ +L G+ R+ L
Sbjct: 134 -----DM-LTYTAMDILAKAAFGMETSMLLGAQKPLSQAVK--LMLEGITASRNTLAKF- 184
Query: 245 WLDIGGYEKAMKKTAKELDSLIE---EWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVD 301
+ G K +++ + + L + +W++ R + G + D + +L EG D
Sbjct: 185 ---LPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDD 241
Query: 302 LSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLL 361
D +T + +T+ +L + + +++ E+D V+G +R L
Sbjct: 242 EGLLD-------NFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYL 294
Query: 362 CESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAE-YHVPKGTRLVLNLWKLQT 420
D+ +L YL V+KE+LRLYP P G + E+ T+ + VP T L+ + + +
Sbjct: 295 DFEDLGRLQYLSQVLKESLRLYP--PAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGR 352
Query: 421 DPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
+ DPL F P+RF F PF G R+C G FA
Sbjct: 353 MDTYFEDPLTFNPDRFGPG-----APKPRFTYFPFSLGHRSCIGQQFA 395
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 255
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 256 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 314
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 315 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 374
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RACPG FAL
Sbjct: 375 FRPERF----ENPSAIPQH-AFKPFGNGQRACPGQQFALH 409
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 22/223 (9%)
Query: 253 KAMKKTAKELDSLIEEWIEEHRRKKESGANLD--LDFIDVLLSVLEGEGVDLSDFDVDTV 310
K +K+ K+L IE I E RR+ + L+ +DF L+ + E G DL+ +V+
Sbjct: 242 KKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELI-LAEKRG-DLTRENVNQC 299
Query: 311 IKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLV 370
I + +++ A DT +V+L + L + KE+ +V+G ER + DI+KL
Sbjct: 300 I----LEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDDIQKLK 354
Query: 371 YLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLE 430
++ I E++R P L R+ ED + Y V KGT ++LN+ ++ LE
Sbjct: 355 VMENFIYESMRYQPVVDLV-MRKALEDDVIDGYPVKKGTNIILNIGRMHR--------LE 405
Query: 431 F--KPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQM 471
F KP F + +V ++F+ PFG G R C G A+ M
Sbjct: 406 FFPKPNEFTLENFAKNVPYRYFQ--PFGFGPRGCAGKYIAMVM 446
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 261 ELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIV 320
+L L++E I E R SG D D+L ++LE + D D + I + I+
Sbjct: 222 DLHLLVDEIIAERR---ASGQKPD----DLLTALLEAKD-DNGDPIGEQEIHDQVVAILT 273
Query: 321 GATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETL 380
++T + W L +++ E+++V G R + D+ KL + VI E +
Sbjct: 274 PGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG-RPVAFEDVRKLRHTGNVIVEAM 332
Query: 381 RLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAH 440
RL PA + R E + Y +P G ++ + + +Q DP+ + D LEF P+R+L
Sbjct: 333 RLRPAVWVLTRRAVAE-SELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLP-E 390
Query: 441 KDVDVKGQHFELLPFGGGRRACPGISFAL 469
+ +V + + PF G+R CP F++
Sbjct: 391 RAANVP--KYAMKPFSAGKRKCPSDHFSM 417
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 160/405 (39%), Gaps = 52/405 (12%)
Query: 68 DKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPY 127
++GP+F R+ + +S + LFTK + L+ LLG N +
Sbjct: 41 QQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLSTRILLGPNALA---TQM 97
Query: 128 NAYWREMRKITAXXXXXXXXXXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKW 187
R RKI ++DG ++ + W K +++++ W
Sbjct: 98 GEIHRSRRKILYQAFLPRTLDSYLP-----KMDGIVQGYLEQWGK----ANEVI-----W 143
Query: 188 FGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLD 247
+ L + +A + G + + + I+ F L +P L
Sbjct: 144 YP--QLRRMTFDVAATLFMGEKVSQNPQLFPWFETYIQGLFSL--------PIPLPNTL- 192
Query: 248 IGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV 307
G ++A EL+ +I + ++ + D + +LL+ + LS +
Sbjct: 193 FGKSQRARALLLAELEKII--------KARQQQPPSEEDALGILLAARDDNNQPLSLPE- 243
Query: 308 DTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIE 367
+K + ++ +T T L+ +V++E + + + L E+ ++
Sbjct: 244 ---LKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAET-LK 299
Query: 368 KLVYLQAVIKETLRLYPAGPLAGA-RQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWS 426
K+ YL V++E LRL P P+ G R+ +DC +H PKG + + + DP ++
Sbjct: 300 KMPYLDQVLQEVLRLIP--PVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYP 357
Query: 427 DPLEFKPERFLTAHKDVDVKGQH---FELLPFGGGRRACPGISFA 468
DP +F PERF D H F +PFGGG R C G FA
Sbjct: 358 DPEKFDPERFTP-----DGSATHNPPFAHVPFGGGLRECLGKEFA 397
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 267 EEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTT 326
E + ++ RRK E ++ +L +L+ E + L D +KA ++ G +TT
Sbjct: 244 EIFYQDLRRKTEFR-----NYPGILYCLLKSEKMLLED------VKANITEMLAGGVNTT 292
Query: 327 TVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY----LQAVIKETLRL 382
++ L W L V++ L V R E DI K++ L+A IKETLRL
Sbjct: 293 SMTLQWHL----YEMARSLNVQEMLREEVLNARRQAEGDISKMLQMVPLLKASIKETLRL 348
Query: 383 YPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKD 442
+P + R D + +Y +P T + + ++ + DP +S P +F P R+L+ KD
Sbjct: 349 HPIS-VTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKD 407
Query: 443 VDVKGQHFELLPFGGGRRACPGISFA-LQMS 472
+ HF L FG G R C G A L+M+
Sbjct: 408 L----IHFRNLGFGWGVRQCVGRRIAELEMT 434
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 311 IKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLV 370
IKA +M + G+ DTT L L +++E + + +L
Sbjct: 278 IKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELP 337
Query: 371 YLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLE 430
L+A +KETLRLYP G L R + D + YH+P GT + + L+ L + ++ P
Sbjct: 338 LLRAALKETLRLYPVG-LFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPER 396
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPG 464
+ P+R+L D+ G++F +PFG G R C G
Sbjct: 397 YNPQRWL----DIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACEGQQFALH 408
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 255
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 256 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 314
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 315 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 374
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 375 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 409
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLHGKDPETGEPLDDENI 255
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ LT+AL K +E V+ + + +++L Y
Sbjct: 256 RYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 314
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LR++P P + EY + KG L++ + +L D VW D + E
Sbjct: 315 VGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEE 374
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 375 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 409
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTV-AEYHVPKGTRLVLNLWKLQTDPRVWSDPL- 429
+ V+ E LRL+P P A + ED + EY + KG L++ + +L D +W D +
Sbjct: 314 VGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
EF+PERF ++ QH PFG G+RAC G FAL
Sbjct: 373 EFRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTV-AEYHVPKGTRLVLNLWKLQTDPRVWSDPL- 429
+ V+ E LRL+P P A + ED + EY + KG L++ + +L D +W D +
Sbjct: 314 VGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
EF+PERF ++ QH PFG G+RAC G FAL
Sbjct: 373 EFRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 205 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 257
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 258 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 316
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 317 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 376
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 377 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 411
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 255
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 256 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 314
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTV-AEYHVPKGTRLVLNLWKLQTDPRVWSDPL- 429
+ V+ E LRL+P P A + ED + EY + KG L++ + +L D +W D +
Sbjct: 315 VGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
EF+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 EFRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 409
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 205 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 257
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 258 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 316
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 317 VGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 376
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 377 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 411
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTV-AEYHVPKGTRLVLNLWKLQTDPRVWSDPL- 429
+ V+ E LRL+P P A + ED + EY + KG L++ + +L D +W D +
Sbjct: 314 VGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
EF+PERF ++ QH PFG G+RAC G FAL
Sbjct: 373 EFRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTQMLNGKDPETGEPLDDGNI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+T ++ +TT+ L++AL KV +E V+ + + +++L Y
Sbjct: 255 SYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG +++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGKQFALH 408
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 255
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T + + T+ L++AL K +E V+ + + +++L Y
Sbjct: 256 RYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 314
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P GP + EY + KG L++ + +L D +W D + E
Sbjct: 315 VGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 374
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 375 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 409
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T + + T+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P GP + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 255
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 256 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 314
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLE- 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D +E
Sbjct: 315 VGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 374
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 375 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 409
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ ++T+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 255
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ ++T+ L++AL K +E V+ + + +++L Y
Sbjct: 256 RYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 314
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 315 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 374
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 375 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 409
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTV-AEYHVPKGTRLVLNLWKLQTDPRVWSDPL- 429
+ V+ E LRL+P P A + ED + EY + KG L++ + +L D +W D +
Sbjct: 314 VGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
EF+PERF ++ QH P+G G+RAC G FAL
Sbjct: 373 EFRPERF----ENPSAIPQH-AFKPYGNGQRACIGQQFALH 408
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ ++T+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 203 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 255
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T + + T+ L++AL K +E V+ + + +++L Y
Sbjct: 256 RYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL-VDPVPSHKQVKQLKY 314
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D VW D + E
Sbjct: 315 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEE 374
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 375 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 409
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTV-AEYHVPKGTRLVLNLWKLQTDPRVWSDPL- 429
+ V+ E LRL+P P A + ED + EY + KG L++ + +L D +W D +
Sbjct: 314 VGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
EF+PERF ++ QH PFG G+RAC G FAL
Sbjct: 373 EFRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 205 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 257
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 258 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 316
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 317 VGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 376
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 377 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 411
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 16/221 (7%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ + T+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTV-AEYHVPKGTRLVLNLWKLQTDPRVWSDPL- 429
+ V+ E LRL+P P A + ED + EY + KG L++ + +L D +W D +
Sbjct: 314 VGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
EF+PERF ++ QH PFG G+RAC G FAL
Sbjct: 373 EFRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 180/439 (41%), Gaps = 47/439 (10%)
Query: 35 KKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKE 94
K PP P +GH +A + P L +KYGP+FS + + + A
Sbjct: 11 KSPPYIFSPIPFLGHA--IAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAAL 68
Query: 95 LFTKHDVDISSR---PKLTVGKLLGHNYANFGFSPYNAYWREMRKITAXXXXXXXXXXXX 151
LF + D+++ +LT + G A + N + E +K+
Sbjct: 69 LFNSKNEDLNAEDVYSRLTT-PVFGKGVA---YDVPNPVFLEQKKM---LKSGLNIAHFK 121
Query: 152 KHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAE 211
+H+ + ++ E KE ++ W ES + K F L+ +IL R++
Sbjct: 122 QHV--SIIEKETKEYFESW----GESGE-----KNVFEALSELIILTASHCLHGKEIRSQ 170
Query: 212 NDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIE 271
+E + Y L GG LP GWL + + + + +E+ + + I+
Sbjct: 171 LNEKVAQLYAD------LDGGFSHAAWLLP--GWLPLPSFRR-RDRAHREIKDIFYKAIQ 221
Query: 272 EHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLT 331
+ R+ +E +D D + LL +G L+D +V ++ + +++ T++
Sbjct: 222 KRRQSQE---KID-DILQTLLDATYKDGRPLTDDEVAGML----IGLLLAGQHTSSTTSA 273
Query: 332 WALSXXXXXXXXXXKVKKELDSVVGKERL--LCESDIEKLVYLQAVIKETLRLYPAGPLA 389
W K E +V G E L L ++ L L IKETLRL P +
Sbjct: 274 WMGFFLARDKTLQKKCYLEQKTVCG-ENLPPLTYDQLKDLNLLDRCIKETLRLRPPI-MI 331
Query: 390 GARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQH 449
R TVA Y +P G ++ ++ Q W + L+F P+R+L +D G+
Sbjct: 332 MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYL---QDNPASGEK 388
Query: 450 FELLPFGGGRRACPGISFA 468
F +PFG GR C G +FA
Sbjct: 389 FAYVPFGAGRHRCIGENFA 407
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 16/221 (7%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ + T+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTV-AEYHVPKGTRLVLNLWKLQTDPRVWSDPL- 429
+ V+ E LRL+P P A + ED + EY + KG L++ + +L D +W D +
Sbjct: 314 VGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
EF+PERF ++ QH PFG G+RAC G FAL
Sbjct: 373 EFRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 16/221 (7%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ + T+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTV-AEYHVPKGTRLVLNLWKLQTDPRVWSDPL- 429
+ V+ E LRL+P P A + ED + EY + KG L++ + +L D +W D +
Sbjct: 314 VGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
EF+PERF ++ QH PFG G+RAC G FAL
Sbjct: 373 EFRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ + T+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T + + T+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 408
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG L++ + +L D +W D + E
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH P+G G+RAC G FAL
Sbjct: 374 FRPERF----ENPSAIPQH-AFKPWGNGQRACIGQQFALH 408
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 286 DFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXX 345
D+ +L +L + D IKA ++ G DTT++ L W L
Sbjct: 257 DYRGILYRLLGDSKMSFED------IKANVTEMLAGGVDTTSMTLQWHL----YEMARNL 306
Query: 346 KVKKELDSVVGKERLLCESDIEKLVYL----QAVIKETLRLYPAGPLAGARQFTEDCTVA 401
KV+ L + V R + D+ ++ L +A IKETLRL+P + R D +
Sbjct: 307 KVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPIS-VTLQRYLVNDLVLR 365
Query: 402 EYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRA 461
+Y +P T + + ++ L +P + DP F P R+L+ K++ +F L FG G R
Sbjct: 366 DYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNI----TYFRNLGFGWGVRQ 421
Query: 462 CPGISFA-LQMS 472
C G A L+M+
Sbjct: 422 CLGRRIAELEMT 433
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 208 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLHGKDPETGEPLDDENI 260
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++ L K +E V+ + + +++L Y
Sbjct: 261 RYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 319
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL-E 430
+ V+ E LRL+P P + EY + KG +++ + +L D +W D + E
Sbjct: 320 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEE 379
Query: 431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
F+PERF ++ QH PFG G+RAC G FAL
Sbjct: 380 FRPERF----ENPSAIPQH-AFKPFGNGQRACIGQQFALH 414
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 286 DFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXX 345
D+ +L +L + D IKA ++ G DTT++ L W L
Sbjct: 254 DYRGILYRLLGDSKMSFED------IKANVTEMLAGGVDTTSMTLQWHL----YEMARNL 303
Query: 346 KVKKELDSVVGKERLLCESDIEKLV----YLQAVIKETLRLYPAGPLAGARQFTEDCTVA 401
KV+ L + V R + D+ ++ L+A IKETLRL+P + R D +
Sbjct: 304 KVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPIS-VTLQRYLVNDLVLR 362
Query: 402 EYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRA 461
+Y +P T + + ++ L +P + DP F P R+L+ K++ +F L FG G R
Sbjct: 363 DYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNI----TYFRNLGFGWGVRQ 418
Query: 462 CPGISFA-LQMS 472
C G A L+M+
Sbjct: 419 CLGRRIAELEMT 430
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 16/221 (7%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTV-AEYHVPKGTRLVLNLWKLQTDPRVWSDPL- 429
+ V+ E LRL+P P A + ED + EY + KG L++ + +L D +W D +
Sbjct: 314 VGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
EF+PERF ++ QH P G G+RAC G FAL
Sbjct: 373 EFRPERF----ENPSAIPQH-AFKPHGNGQRACIGQQFALH 408
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 16/221 (7%)
Query: 252 EKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVI 311
++ ++ K ++ L+++ I + +K SG D D+L +L G+ + + D I
Sbjct: 202 KRQFQEDIKVMNDLVDKIIAD---RKASGEQSD----DLLTHMLNGKDPETGEPLDDENI 254
Query: 312 KATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVY 371
+ +T ++ +TT+ L++AL K +E V+ + + +++L Y
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKY 313
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTV-AEYHVPKGTRLVLNLWKLQTDPRVWSDPL- 429
+ V+ E LRL+P P A + ED + EY + KG L++ + +L D +W D +
Sbjct: 314 VGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQ 470
EF+PERF ++ QH P G G+RAC G FAL
Sbjct: 373 EFRPERF----ENPSAIPQH-AFKPAGNGQRACIGQQFALH 408
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 373 QAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFK 432
+ ++E R YP GP GA +D KGT ++L+L+ DPR+W P EF+
Sbjct: 277 EMFVQEVRRYYPFGPFLGA-LVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFR 335
Query: 433 PERFLTAHKDVDVKGQHFELLPFGGGR----RACPGISFALQM 471
PERF +++ F+++P GGG CPG +++
Sbjct: 336 PERFAEREENL------FDMIPQGGGHAEKGHRCPGEGITIEV 372
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 34/245 (13%)
Query: 248 IGGYEKAMKKTAKEL-DSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFD 306
+ G M +TA + L E E+ +K+ES I L+S+ LS FD
Sbjct: 203 VAGLPIHMFRTAHNAREKLAESLRHENLQKRES--------ISELISLRMFLNDTLSTFD 254
Query: 307 VDTVIKATTMTIIVGATDTTTVNLT-WAL----SXXXXXXXXXXKVKKELD------SVV 355
+ KA T +++ A+ T+ T W+L +VK+ L+ S+
Sbjct: 255 --DLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLE 312
Query: 356 GKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTV----AEYHVPKGTRL 411
G L ++++ L L ++IKE+LRL A R ED T+ Y++ K +
Sbjct: 313 GNPICLSQAELNDLPVLDSIIKESLRLSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDII 370
Query: 412 VLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVK------GQHFELLPFGGGRRACPGI 465
L + DP ++ DPL FK +R+L + + +PFG G CPG
Sbjct: 371 ALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGR 430
Query: 466 SFALQ 470
FA+
Sbjct: 431 LFAIH 435
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 34/245 (13%)
Query: 248 IGGYEKAMKKTAKEL-DSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFD 306
+ G M +TA + L E E+ +K+ES I L+S+ LS FD
Sbjct: 203 VAGLPIHMFRTAHNAREKLAESLRHENLQKRES--------ISELISLRMFLNDTLSTFD 254
Query: 307 VDTVIKATTMTIIVGATDTTTVNLT-WAL----SXXXXXXXXXXKVKKELD------SVV 355
+ KA T +++ A+ T+ T W+L +VK+ L+ S+
Sbjct: 255 --DLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLE 312
Query: 356 GKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTV----AEYHVPKGTRL 411
G L ++++ L L ++IKE+LRL A R ED T+ Y++ K +
Sbjct: 313 GNPICLSQAELNDLPVLDSIIKESLRLSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDII 370
Query: 412 VLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVK------GQHFELLPFGGGRRACPGI 465
L + DP ++ DPL FK +R+L + + +PFG G CPG
Sbjct: 371 ALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGR 430
Query: 466 SFALQ 470
FA+
Sbjct: 431 LFAIH 435
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 366 IEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVW 425
+++ Y + ++E R YP GP AR ++D P+G ++VL+L+ D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVARA-SQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 426 SDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGR----RACPG 464
+DP EF+PERF +D F +P GGG CPG
Sbjct: 327 ADPQEFRPERFRAWDED------SFNFIPQGGGDHYLGHRCPG 363
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 284 DLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXX 343
D D +DVL++V G F D I ++++ T++ +W L
Sbjct: 222 DRDMLDVLIAVKAETGT--PRFSADE-ITGMFISMMFAGHHTSSGTASWTLIELMRHRDA 278
Query: 344 XXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTE-DCTVAE 402
V ELD + G R + + ++ L+ V+KETLRL+P PL + + + V
Sbjct: 279 YAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQG 336
Query: 403 YHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRAC 462
+ + +G + + P + DP +F P R+ ++ D+ + + +PFG GR C
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQE-DLLNR-WTWIPFGAGRHRC 394
Query: 463 PGISFAL 469
G +FA+
Sbjct: 395 VGAAFAI 401
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 284 DLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXX 343
D D +DVL++V G F D I ++++ T++ +W L
Sbjct: 222 DRDMLDVLIAVKAETGT--PRFSADE-ITGMFISMMFAGHHTSSGTASWTLIELMRHRDA 278
Query: 344 XXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTE-DCTVAE 402
V ELD + G R + + ++ L+ V+KETLRL+P PL + + + V
Sbjct: 279 YAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQG 336
Query: 403 YHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRAC 462
+ + +G + + P + DP +F P R+ ++ D+ + + +PFG GR C
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQE-DLLNR-WTWIPFGAGRHRC 394
Query: 463 PGISFAL 469
G +FA+
Sbjct: 395 VGAAFAI 401
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 284 DLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXX 343
D D +DVL++V G F D I ++++ T++ +W L
Sbjct: 222 DRDMLDVLIAVKAETGT--PRFSADE-ITGMFISMMFAGHHTSSGTASWTLIELMRHRDA 278
Query: 344 XXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTE-DCTVAE 402
V ELD + G R + + ++ L+ V+KETLRL+P PL + + + V
Sbjct: 279 YAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQG 336
Query: 403 YHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRAC 462
+ + +G + + P + DP +F P R+ ++ D+ + + +PFG GR C
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQE-DLLNR-WTWIPFGAGRHRC 394
Query: 463 PGISFAL 469
G +FA+
Sbjct: 395 VGAAFAI 401
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 284 DLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSXXXXXXXX 343
D D +DVL++V G F D I ++++ T++ +W L
Sbjct: 222 DRDMLDVLIAVKAETGT--PRFSADE-ITGMFISMMFAGHHTSSGTASWTLIELMRHRDA 278
Query: 344 XXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTE-DCTVAE 402
V ELD + G R + + ++ L+ V+KETLRL+P PL + + + V
Sbjct: 279 YAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP--PLIILMRVAKGEFEVQG 336
Query: 403 YHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRAC 462
+ + +G + + P + DP +F P R+ ++ D+ + + +PFG GR C
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQE-DLLNR-WTWIPFGAGRHRC 394
Query: 463 PGISFAL 469
G +FA+
Sbjct: 395 VGAAFAI 401
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 366 IEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVW 425
+++ Y + ++E R YP P AR ++D P+G ++VL+L+ D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARA-SQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 426 SDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGR----RACPG 464
+DP EF+PERF +D F +P GGG CPG
Sbjct: 319 ADPQEFRPERFRAWDED------SFNFIPQGGGDHYLGHRCPG 355
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 366 IEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVW 425
+++ Y + ++E R YP P AR ++D P+G ++VL+L+ D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARA-SQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 426 SDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGR----RACPG 464
+DP EF+PERF +D F +P GGG CPG
Sbjct: 319 ADPQEFRPERFRAWDED------SFNFIPQGGGDHYLGHRCPG 355
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 366 IEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVW 425
+++ Y + ++E R YP P AR ++D P+G ++VL+L+ D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARA-SQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 426 SDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGR----RACPG 464
+DP EF+PERF +D F +P GGG CPG
Sbjct: 319 ADPQEFRPERFRAWDED------SFNFIPQGGGDHYLGHRCPG 355
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 366 IEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVW 425
+++ Y + ++E R YP P AR ++D P+G ++VL+L+ D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARA-SQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 426 SDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGR----RACPG 464
+DP EF+PERF +D F +P GGG CPG
Sbjct: 327 ADPQEFRPERFRAWDED------SFNFIPQGGGDHYLGHRCPG 363
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 366 IEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVW 425
+++ Y + ++E R YP P AR ++D P+G ++VL+L+ D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARA-SQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 426 SDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGR----RACPG 464
+DP EF+PERF +D F +P GGG CPG
Sbjct: 327 ADPQEFRPERFRAWDED------SFNFIPQGGGDHYLGHRCPG 363
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 171/443 (38%), Gaps = 49/443 (11%)
Query: 34 GKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAK 93
GK PP G P +GH+ L + KYG +F++ I + VV
Sbjct: 2 GKLPPVVHGTTPFVGHIIQFGKDPLGFMLKAK--KKYGGIFTMNICGNRITVVGDVHQHS 59
Query: 94 ELFTKHDVDISSRPKLT-VGKLLGHNYANFGFSPYNAYWREMRKITAXXXXXXXXXXXXK 152
+ FT + +S R + + + G A Y A + MR+
Sbjct: 60 KFFTPRNEILSPREVYSFMVPVFGEGVA------YAAPYPRMREQLNFLAEELTVAKFQN 113
Query: 153 HIRATEVDGEIKEIYKI-WTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFGA--R 209
A + E+++ K W K + E + +L+ + + +++ A + FG R
Sbjct: 114 F--APSIQHEVRKFMKANWNKDEGEIN--ILD--------DCSAMIINTACQCLFGEDLR 161
Query: 210 AENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEW 269
D + + A + + + VFL P++ L + + A+ D L E
Sbjct: 162 KRLDARQFAQLLAKMESCLIPAAVFL-----PWILKLPLPQSYRCRDARAELQDILSEII 216
Query: 270 IEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVN 329
I + + + N D + LL + +G +S +V +I A + T+T+
Sbjct: 217 IAREKEEAQKDTNTS-DLLAGLLGAVYRDGTRMSQHEVCGMIVAA----MFAGQHTSTIT 271
Query: 330 LTWALSXXX--XXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGP 387
TW+L K+ +E+D + L ++ +E++ + + +E++R P P
Sbjct: 272 TTWSLLHLMDPRNKRHLAKLHQEIDEFPAQ--LNYDNVMEEMPFAEQCARESIRRDP--P 327
Query: 388 LAG-ARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVK 446
L R+ + V +Y VP+G + + D + +P E+ PER + K VD
Sbjct: 328 LVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPERNM---KLVDGA 384
Query: 447 GQHFELLPFGGGRRACPGISFAL 469
FG G C G F L
Sbjct: 385 -----FCGFGAGVHKCIGEKFGL 402
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 167/444 (37%), Gaps = 41/444 (9%)
Query: 29 KWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSS 88
K S GK PP P +GH+ L + K G +F+I IG +V
Sbjct: 1 KTSGKGKLPPVYPVTVPFLGHIVQFGKNPLEFMQRCKRDLKSG-VFTISIGGQRVTIVGD 59
Query: 89 WEMAKELFTKHDVDISSRPKLTV-GKLLGHNYANFGFSPYNAYWREMRKITAXXXXXXXX 147
F+ + +S R T+ + G A Y A + MR+
Sbjct: 60 PHEHSRFFSPRNEILSPREVYTIMTPVFGEGVA------YAAPYPRMREQLNFLAEELTI 113
Query: 148 XXXXKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFG 207
+ A + E+ K + E D+ ++ + + G + +N + G+
Sbjct: 114 AKFQNFVPAIQ-----HEVRKFMAENWKE-DEGVINLLEDCGAMIINTACQCLFGE---D 164
Query: 208 ARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIE 267
R + + + + + + VF+ P+L L + + + A EL ++
Sbjct: 165 LRKRLNARHFAQLLSKMESSLIPAAVFM-----PWLLRLPLPQSARCREARA-ELQKILG 218
Query: 268 EWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTT 327
E I +++ S N D + LL + +G +S +V +I A + T+T
Sbjct: 219 EIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAA----MFAGQHTST 274
Query: 328 VNLTWALSXXXXXXXXX--XKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPA 385
+ +W++ K+ KE+D + L ++ ++++ + + ++E++R P
Sbjct: 275 ITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQ--LNYDNVMDEMPFAERCVRESIRRDPP 332
Query: 386 GPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDV 445
L R + V Y VPKG + + D + +P + PER D V
Sbjct: 333 L-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER------DEKV 385
Query: 446 KGQHFELLPFGGGRRACPGISFAL 469
G + FG G C G FAL
Sbjct: 386 DGA---FIGFGAGVHKCIGQKFAL 406
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 352 DSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVA-----EYHVP 406
+ + G + L E + +V+ ETLRL A + R T+D + EYH+
Sbjct: 292 EEIQGGKHLRLEERQKNTPVFDSVLWETLRLTAAALIT--RDVTQDKKICLSNGQEYHLR 349
Query: 407 KGTRL-VLNLWKLQTDPRVWSDPLEFKPERFLTA----HKDVDVKGQH--FELLPFGGGR 459
+G RL V Q DP++ P F+ +RFL A KD G + +P+G
Sbjct: 350 RGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTED 409
Query: 460 RACPGISFALQ 470
CPG FA+
Sbjct: 410 NLCPGRHFAVH 420
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 256 KKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATT 315
++ EL ++ E I +++ S N D + LL + +G +S +V +I A
Sbjct: 201 REARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAA- 259
Query: 316 MTIIVGATDTTTVNLTWALSXXXXXXXXX--XKVKKELDSVVGKERLLCESDIEKLVYLQ 373
+ T+T+ +W++ K+ KE+D + L ++ ++++ + +
Sbjct: 260 ---MFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQ--LNYDNVMDEMPFAE 314
Query: 374 AVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKP 433
++E++R P L R + V Y VPKG + + D + +P + P
Sbjct: 315 RCVRESIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDP 373
Query: 434 ERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFAL 469
ER D V G + FG G C G FAL
Sbjct: 374 ER------DEKVDGA---FIGFGAGVHKCIGQKFAL 400
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 256 KKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATT 315
++ EL ++ E I +++ S N D + LL + +G +S +V +I A
Sbjct: 216 REARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAA- 274
Query: 316 MTIIVGATDTTTVNLTWALSXXXXXXXXX--XKVKKELDSVVGKERLLCESDIEKLVYLQ 373
+ T+T+ +W++ K+ KE+D + L ++ ++++ + +
Sbjct: 275 ---MFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQ--LNYDNVMDEMPFAE 329
Query: 374 AVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKP 433
++E++R P L R + V Y VPKG + + D + +P + P
Sbjct: 330 RCVRESIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDP 388
Query: 434 ERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFAL 469
ER D V G + FG G C G FAL
Sbjct: 389 ER------DEKVDGA---FIGFGAGVHKCIGQKFAL 415
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 22/196 (11%)
Query: 295 LEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLT-WALSXXXXXXXXXXKVKKELDS 353
LE + L + V ++A + + + AT W L V+ EL+S
Sbjct: 246 LESYLLHLEEMGVSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELES 305
Query: 354 V-------VGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVA----- 401
+ V + L + ++ L +V+ E+LRL A P R+ D +
Sbjct: 306 ILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-TAAPFI-TREVVVDLAMPMADGR 363
Query: 402 EYHVPKGTRLVL-NLWKLQTDPRVWSDPLEFKPERFL----TAHKDVDVKGQHFE--LLP 454
E+++ +G RL+L Q DP +++DP FK RFL + KD G+ + +P
Sbjct: 364 EFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMP 423
Query: 455 FGGGRRACPGISFALQ 470
+G G C G S+A+
Sbjct: 424 WGAGHNHCLGRSYAVN 439
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 22/196 (11%)
Query: 295 LEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLT-WALSXXXXXXXXXXKVKKELDS 353
LE + L + V ++A + + + AT W L V+ EL+S
Sbjct: 234 LESYLLHLEEMGVSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELES 293
Query: 354 V-------VGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVA----- 401
+ V + L + ++ L +V+ E+LRL A P R+ D +
Sbjct: 294 ILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-TAAPFI-TREVVVDLAMPMADGR 351
Query: 402 EYHVPKGTRLVL-NLWKLQTDPRVWSDPLEFKPERFL----TAHKDVDVKGQHFE--LLP 454
E+++ +G RL+L Q DP +++DP FK RFL + KD G+ + +P
Sbjct: 352 EFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMP 411
Query: 455 FGGGRRACPGISFALQ 470
+G G C G S+A+
Sbjct: 412 WGAGHNHCLGRSYAVN 427
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 76/195 (38%), Gaps = 39/195 (20%)
Query: 274 RRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWA 333
+RK E G +L D + +GV L D+++ T++ T++V +TT L A
Sbjct: 206 KRKVEPGDDLTSDIVRAF-----HDGV-LDDYELRTLVA----TVLVAGYETTNHQLALA 255
Query: 334 LSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQ 393
+ K+K E ++E LR P P+ R
Sbjct: 256 MYDFAQHPDQWMKIK------------------ENPELAPQAVEEVLRWSPTLPVTATRV 297
Query: 394 FTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELL 453
ED V +P GT + + DPRV++D +RF D+ VK + +
Sbjct: 298 AAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFAD-----ADRF-----DITVK-REAPSI 346
Query: 454 PFGGGRRACPGISFA 468
FGGG C G + A
Sbjct: 347 AFGGGPHFCLGTALA 361
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 76/195 (38%), Gaps = 39/195 (20%)
Query: 274 RRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWA 333
+RK E G +L D + +GV L D+++ T++ T++V +TT L A
Sbjct: 216 KRKVEPGDDLTSDIVRAF-----HDGV-LDDYELRTLVA----TVLVAGYETTNHQLALA 265
Query: 334 LSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQ 393
+ K+K E ++E LR P P+ R
Sbjct: 266 MYDFAQHPDQWMKIK------------------ENPELAPQAVEEVLRWSPTLPVTATRV 307
Query: 394 FTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELL 453
ED V +P GT + + DPRV++D +RF D+ VK + +
Sbjct: 308 AAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFAD-----ADRF-----DITVK-REAPSI 356
Query: 454 PFGGGRRACPGISFA 468
FGGG C G + A
Sbjct: 357 AFGGGPHFCLGTALA 371
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 374 AVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKP 433
AVI+ET+R P L +R +D T+ + VPKG ++L L DP + P F P
Sbjct: 291 AVIEETMRYDPPVQLV-SRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDP 349
Query: 434 ERFLTAHKDVDVKGQHFEL 452
+R H KG HF L
Sbjct: 350 DRAQIRHLGFG-KGAHFCL 367
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 376 IKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLE-FKPE 434
+E LRLYP + R+ + E +P+GT LVL+ + Q R++ E F+PE
Sbjct: 258 FQEALRLYPPAWIL-TRRLERPLLLGEDRLPQGTTLVLSPYVTQ---RLYFPEGEAFQPE 313
Query: 435 RFLTAHKDVDVKGQHFELLPFGGGRRACPGISFAL 469
RFL G++F PFG G+R C G FAL
Sbjct: 314 RFLAERGTPS--GRYF---PFGLGQRLCLGRDFAL 343
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 376 IKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPER 435
+E LRLYP + R+ + E +P GT LVL+ + Q + D F+PER
Sbjct: 258 FQEALRLYPPAWIL-TRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPER 314
Query: 436 FLTAHKDVDVKGQHFELLPFGGGRRACPGISFAL 469
FL G++F PFG G+R C G FAL
Sbjct: 315 FLEERGTPS--GRYF---PFGLGQRLCLGRDFAL 343
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 18/211 (8%)
Query: 261 ELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIV 320
EL ++ E I + ++ + + D + LLS + +G +S +V +I A +
Sbjct: 208 ELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA----MF 263
Query: 321 GATDTTTVNLTWALSXXX--XXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKE 378
T+++ TW++ ++KE++ + L + ++++ + + +E
Sbjct: 264 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ--LNYNNVMDEMPFAERCARE 321
Query: 379 TLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLT 438
++R P L R+ D V Y VPKG + + D + +P + PER
Sbjct: 322 SIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--- 377
Query: 439 AHKDVDVKGQHFELLPFGGGRRACPGISFAL 469
D V+G + FG G C G F L
Sbjct: 378 ---DEKVEGA---FIGFGAGVHKCIGQKFGL 402
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 18/211 (8%)
Query: 261 ELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIV 320
EL ++ E I + ++ + + D + LLS + +G +S +V +I A +
Sbjct: 207 ELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA----MF 262
Query: 321 GATDTTTVNLTWALSXXX--XXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKE 378
T+++ TW++ ++KE++ + L + ++++ + + +E
Sbjct: 263 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ--LNYNNVMDEMPFAERCARE 320
Query: 379 TLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLT 438
++R P L R+ D V Y VPKG + + D + +P + PER
Sbjct: 321 SIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--- 376
Query: 439 AHKDVDVKGQHFELLPFGGGRRACPGISFAL 469
D V+G + FG G C G F L
Sbjct: 377 ---DEKVEGA---FIGFGAGVHKCIGQKFGL 401
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 18/211 (8%)
Query: 261 ELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIV 320
EL ++ E I + ++ + + D + LLS + +G +S +V +I A +
Sbjct: 221 ELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA----MF 276
Query: 321 GATDTTTVNLTWALSXXX--XXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKE 378
T+++ TW++ ++KE++ + L + ++++ + + +E
Sbjct: 277 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ--LNYNNVMDEMPFAERCARE 334
Query: 379 TLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLT 438
++R P L R+ D V Y VPKG + + D + +P + PER
Sbjct: 335 SIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--- 390
Query: 439 AHKDVDVKGQHFELLPFGGGRRACPGISFAL 469
D V+G + FG G C G F L
Sbjct: 391 ---DEKVEGA---FIGFGAGVHKCIGQKFGL 415
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 18/211 (8%)
Query: 261 ELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIV 320
EL ++ E I + ++ + + D + LLS + +G +S +V +I A +
Sbjct: 208 ELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA----MF 263
Query: 321 GATDTTTVNLTWALSXXX--XXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKE 378
T+++ TW++ ++KE++ + L + ++++ + + +E
Sbjct: 264 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ--LNYNNVMDEMPFAERCARE 321
Query: 379 TLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLT 438
++R P L R+ D V Y VPKG + + D + +P + PER
Sbjct: 322 SIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--- 377
Query: 439 AHKDVDVKGQHFELLPFGGGRRACPGISFAL 469
D V+G + FG G C G F L
Sbjct: 378 ---DEKVEGA---FIGFGAGVHKCIGQKFGL 402
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 18/211 (8%)
Query: 261 ELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIV 320
EL ++ E I + ++ + + D + LLS + +G +S +V +I A +
Sbjct: 209 ELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA----MF 264
Query: 321 GATDTTTVNLTWALSXXX--XXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKE 378
T+++ TW++ ++KE++ + L + ++++ + + +E
Sbjct: 265 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ--LNYNNVMDEMPFAERCARE 322
Query: 379 TLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLT 438
++R P L R+ D V Y VPKG + + D + +P + PER
Sbjct: 323 SIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--- 378
Query: 439 AHKDVDVKGQHFELLPFGGGRRACPGISFAL 469
D V+G + FG G C G F L
Sbjct: 379 ---DEKVEGA---FIGFGAGVHKCIGQKFGL 403
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 18/211 (8%)
Query: 261 ELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIV 320
EL ++ E I + + + D + LLS + +G +S +V +I A +
Sbjct: 221 ELQKILSEIIIARKAAAVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA----MF 276
Query: 321 GATDTTTVNLTWALSXXX--XXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQAVIKE 378
T+++ TW++ ++KE++ + L + ++++ + + +E
Sbjct: 277 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ--LNYNNVMDEMPFAERCARE 334
Query: 379 TLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLT 438
++R P L R+ D V Y VPKG + + D + +P + PER
Sbjct: 335 SIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--- 390
Query: 439 AHKDVDVKGQHFELLPFGGGRRACPGISFAL 469
D V+G + FG G C G F L
Sbjct: 391 ---DEKVEGA---FIGFGAGVHKCIGQKFGL 415
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 366 IEKLVYLQAVIKETLRLYPAGPLAGAR---QFTEDCTVAEYHVPKGTRLVLNLWKLQTDP 422
IE++ ++V+ E+LR+ P P + FT + A + V KG L DP
Sbjct: 324 IEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDP 383
Query: 423 RVWSDPLEFKPERFL 437
+V+ P E+ P+RF+
Sbjct: 384 KVFDRPEEYVPDRFV 398
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 75/215 (34%), Gaps = 41/215 (19%)
Query: 254 AMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKA 313
A + L L+ + ++E R AN D I L++ + +GV D D +
Sbjct: 181 ATEAAGMRLGGLLYQLVQERR------ANPGDDLISALITTEDPDGV----VD-DMFLMN 229
Query: 314 TTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQ 373
T+++ A DTT + + ++++ S+VG
Sbjct: 230 AAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLRED-PSLVGN---------------- 272
Query: 374 AVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKP 433
++E LR G G R T D + + KG ++V ++ DP +P F
Sbjct: 273 -AVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDI 331
Query: 434 ERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
R H L FG G C G A
Sbjct: 332 TRRPAPH------------LAFGFGAHQCIGQQLA 354
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 75/215 (34%), Gaps = 41/215 (19%)
Query: 254 AMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKA 313
A + L L+ + ++E R AN D I L++ + +GV D D +
Sbjct: 181 ATEAAGMRLGGLLYQLVQERR------ANPGDDLISALITTEDPDGV----VD-DMFLMN 229
Query: 314 TTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQ 373
T+++ A DTT + + ++++ S+VG
Sbjct: 230 AAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLRED-PSLVGN---------------- 272
Query: 374 AVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKP 433
++E LR G G R T D + + KG ++V ++ DP +P F
Sbjct: 273 -AVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDI 331
Query: 434 ERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
R H L FG G C G A
Sbjct: 332 TRRPAPH------------LAFGFGAHQCIGQQLA 354
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 75/215 (34%), Gaps = 41/215 (19%)
Query: 254 AMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKA 313
A + L L+ + ++E R AN D I L++ + +GV D D +
Sbjct: 181 ATEAAGMRLGGLLYQLVQERR------ANPGDDLISALITTEDPDGV----VD-DMFLMN 229
Query: 314 TTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYLQ 373
T+++ A DTT + + ++++ S+VG
Sbjct: 230 AAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLRED-PSLVGN---------------- 272
Query: 374 AVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKP 433
++E LR G G R T D + + KG ++V ++ DP +P F
Sbjct: 273 -AVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDI 331
Query: 434 ERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
R H L FG G C G A
Sbjct: 332 TRRPAPH------------LAFGFGAHQCIGQQLA 354
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 13/94 (13%)
Query: 375 VIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPE 434
++E LR Y + AR +ED + + +G ++ L L DP ++++P F
Sbjct: 270 AVEECLR-YESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDIT 328
Query: 435 RFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
R H L FG G C G S A
Sbjct: 329 RSPNPH------------LSFGHGHHVCLGSSLA 350
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 13/97 (13%)
Query: 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEF 431
+ V++E LR + + + R T D T+ +P GT +V L DP + DP F
Sbjct: 287 VDTVVEEVLR-WTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTF 345
Query: 432 KPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
P R H + FG G C G + A
Sbjct: 346 LPGRKPNRH------------ITFGHGMHHCLGSALA 370
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 40/216 (18%)
Query: 253 KAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIK 312
K + + E +L+ ++E RR L+ D + +LL E +G LS ++ ++
Sbjct: 196 KTLVASVTEGLALLHGVLDERRRNP-----LENDVLTMLLQA-EADGSRLSTKELVALVG 249
Query: 313 ATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYL 372
A II TDTT + +A+ VK E L + +++++
Sbjct: 250 A----IIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG--------LMRNALDEVLRF 297
Query: 373 QAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFK 432
+ +++ G + ARQ E C + + KG + L + D V+S P F
Sbjct: 298 ENILR-------IGTVRFARQDLEYCGAS---IKKGEMVFLLIPSALRDGTVFSRPDVF- 346
Query: 433 PERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
DV+ L +G G CPG+S A
Sbjct: 347 -----------DVRRDTSASLAYGRGPHVCPGVSLA 371
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 12/93 (12%)
Query: 376 IKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPER 435
++E LR + +R TED + + G +++++ DP V+ DP ER
Sbjct: 282 VEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER 341
Query: 436 FLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
H L FG G C G + A
Sbjct: 342 GARHH------------LAFGFGPHQCLGQNLA 362
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 374 AVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKP 433
A+I E +R+ P L+ R TED + + G+ + + DP V+ DP F
Sbjct: 266 AIINEMVRMDPPQ-LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 324
Query: 434 ERFLTAHKDVDVKGQHFELLPFGGGRRACPG 464
R A ++ L FG G +C G
Sbjct: 325 TRPPAASRN----------LSFGLGPHSCAG 345
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 374 AVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKP 433
A+I E +R+ P L+ R TED + + G+ + + DP V+ DP F
Sbjct: 268 AIINEMVRMDPPQ-LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 326
Query: 434 ERFLTAHKDVDVKGQHFELLPFGGGRRACPG 464
R A ++ L FG G +C G
Sbjct: 327 TRPPAASRN----------LSFGLGPHSCAG 347
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 40/216 (18%)
Query: 253 KAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIK 312
K + + E +L+ ++E RR L+ D + +LL E +G LS ++ ++
Sbjct: 196 KTLVASVTEGLALLHGVLDERRRNP-----LENDVLTMLLQA-EADGSRLSTKELVALVG 249
Query: 313 ATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLVYL 372
A II TDTT + +A+ VK E L + +++++
Sbjct: 250 A----IIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG--------LMRNALDEVLRF 297
Query: 373 QAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFK 432
+++ G + ARQ E C + + KG + L + D V+S P F
Sbjct: 298 DNILR-------IGTVRFARQDLEYCGAS---IKKGEMVFLLIPSALRDGTVFSRPDVF- 346
Query: 433 PERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
DV+ L +G G CPG+S A
Sbjct: 347 -----------DVRRDTSASLAYGRGPHVCPGVSLA 371
>pdb|3B4R|A Chain A, Site-2 Protease From Methanocaldococcus Jannaschii
pdb|3B4R|B Chain B, Site-2 Protease From Methanocaldococcus Jannaschii
Length = 224
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 188 FGDLNLNVILMMIAGKRYFGARAENDETEV 217
FG L++N+IL++++ YFGA E+ EV
Sbjct: 184 FGLLSMNIILILVSLFVYFGAEQESRVVEV 213
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 392 RQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAH 440
R T D +A + +G ++++ L DPR W DP + R + H
Sbjct: 303 RTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKTSGH 351
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 32/159 (20%)
Query: 311 IKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLV 370
I A T T++ G DT T L ++ L + RLL + D E +
Sbjct: 240 ILAFTFTMVTGGNDTVTGMLGGSMPL--------------LHRRPDQRRLLLD-DPEGI- 283
Query: 371 YLQAVIKETLRLYPAGPLAG-ARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL 429
++E LRL P+ G AR T D T+ + +P G R++L D R
Sbjct: 284 --PDAVEELLRL--TSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDER------ 333
Query: 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
++ P+ ++DV +L F G C G + A
Sbjct: 334 QYGPDA-----AELDVTRCPRNILTFSHGAHHCLGAAAA 367
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 374 AVIKETLRLYPAGPL-AGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDP 428
A ++E +R P P+ A R ED + ++ +P+G+R+V L DP + DP
Sbjct: 289 AAVEELMRYDP--PVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDP 342
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 32/159 (20%)
Query: 311 IKATTMTIIVGATDTTTVNLTWALSXXXXXXXXXXKVKKELDSVVGKERLLCESDIEKLV 370
I A T T++ G DT T L ++ L + RLL + D E +
Sbjct: 239 ILAFTFTMVTGGNDTVTGMLGGSMPL--------------LHRRPDQRRLLLD-DPEGI- 282
Query: 371 YLQAVIKETLRLYPAGPLAG-ARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL 429
++E LRL P+ G AR T D T+ + +P G R++L D R
Sbjct: 283 --PDAVEELLRL--TSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDER------ 332
Query: 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
++ P+ ++DV +L F G C G + A
Sbjct: 333 QYGPDA-----AELDVTRCPRNILTFSHGAHHCLGAAAA 366
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 376 IKETLRLYPAGPLAG-ARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPE 434
++E LRL P+ G AR T D T+ + +P G R++L D R ++ P+
Sbjct: 286 VEELLRL--TSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDER------QYGPD 337
Query: 435 RFLTAHKDVDVKGQHFELLPFGGGRRACPGISFA 468
++DV +L F G C G + A
Sbjct: 338 A-----AELDVTRCPRNILTFSHGAHHCLGAAAA 366
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,330,783
Number of Sequences: 62578
Number of extensions: 619808
Number of successful extensions: 1638
Number of sequences better than 100.0: 130
Number of HSP's better than 100.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1370
Number of HSP's gapped (non-prelim): 159
length of query: 523
length of database: 14,973,337
effective HSP length: 103
effective length of query: 420
effective length of database: 8,527,803
effective search space: 3581677260
effective search space used: 3581677260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)