Query         009899
Match_columns 523
No_of_seqs    201 out of 1934
Neff          11.2
Searched_HMMs 46136
Date          Thu Mar 28 18:39:41 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009899.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009899hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 2.7E-88 5.8E-93  647.2  47.9  464   31-517    21-488 (489)
  2 PLN02971 tryptophan N-hydroxyl 100.0 7.5E-81 1.6E-85  621.2  48.7  477   33-522    54-539 (543)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 1.9E-80 4.1E-85  583.1  42.6  464   32-517    27-499 (499)
  4 PLN03234 cytochrome P450 83B1; 100.0 1.3E-79 2.7E-84  610.5  49.0  482   19-516    11-498 (499)
  5 PLN00110 flavonoid 3',5'-hydro 100.0 1.2E-79 2.5E-84  607.0  48.1  472   34-522    29-502 (504)
  6 PLN02687 flavonoid 3'-monooxyg 100.0 1.2E-79 2.7E-84  610.8  48.2  490   16-517    11-509 (517)
  7 PLN02183 ferulate 5-hydroxylas 100.0 7.5E-79 1.6E-83  605.1  48.6  477   21-518    21-513 (516)
  8 PLN03112 cytochrome P450 famil 100.0 1.2E-78 2.5E-83  605.3  49.8  490   20-522    16-513 (514)
  9 PLN02394 trans-cinnamate 4-mon 100.0 3.8E-78 8.2E-83  600.5  48.0  474   27-518    21-503 (503)
 10 PLN00168 Cytochrome P450; Prov 100.0 7.6E-77 1.7E-81  591.1  48.7  470   33-518    32-518 (519)
 11 PLN02966 cytochrome P450 83A1  100.0 7.2E-77 1.6E-81  589.5  47.1  468   31-516    24-499 (502)
 12 PTZ00404 cytochrome P450; Prov 100.0 4.2E-77 9.2E-82  589.8  45.3  457   32-516    25-482 (482)
 13 PLN02655 ent-kaurene oxidase   100.0 1.7E-75 3.7E-80  574.2  44.3  460   38-518     1-465 (466)
 14 PLN02290 cytokinin trans-hydro 100.0 1.1E-75 2.3E-80  584.3  42.3  456   34-518    40-516 (516)
 15 PLN03018 homomethionine N-hydr 100.0 1.3E-73 2.8E-78  564.5  51.2  469   36-517    40-524 (534)
 16 KOG0159 Cytochrome P450 CYP11/ 100.0 6.5E-75 1.4E-79  531.9  37.6  459   34-517    48-518 (519)
 17 PLN02500 cytochrome P450 90B1  100.0 8.6E-74 1.9E-78  566.3  42.4  439   32-515    34-488 (490)
 18 KOG0157 Cytochrome P450 CYP4/C 100.0 1.2E-73 2.6E-78  559.0  38.7  453   34-518    33-497 (497)
 19 PF00067 p450:  Cytochrome P450 100.0   6E-74 1.3E-78  570.6  33.8  456   38-513     1-463 (463)
 20 PLN02169 fatty acid (omega-1)- 100.0 9.7E-73 2.1E-77  556.6  40.7  452   36-516    31-499 (500)
 21 PLN02774 brassinosteroid-6-oxi 100.0 5.6E-72 1.2E-76  548.8  41.2  428   35-515    30-462 (463)
 22 PLN03195 fatty acid omega-hydr 100.0 6.7E-72 1.5E-76  556.4  40.9  452   37-517    31-516 (516)
 23 PLN02738 carotene beta-ring hy 100.0   1E-71 2.2E-76  556.4  41.0  444   48-518   143-596 (633)
 24 PLN02196 abscisic acid 8'-hydr 100.0 5.1E-71 1.1E-75  541.5  41.1  431   28-515    27-461 (463)
 25 PLN03141 3-epi-6-deoxocathaste 100.0   2E-70 4.3E-75  536.7  40.3  436   32-518     3-451 (452)
 26 PLN02987 Cytochrome P450, fami 100.0 1.7E-69 3.7E-74  528.3  43.4  447   22-517    16-469 (472)
 27 PLN02302 ent-kaurenoic acid ox 100.0 3.7E-69   8E-74  536.1  44.6  439   33-518    39-489 (490)
 28 PLN02936 epsilon-ring hydroxyl 100.0 2.1E-69 4.7E-74  533.2  40.2  453   35-518    11-483 (489)
 29 PLN02426 cytochrome P450, fami 100.0 7.3E-69 1.6E-73  528.0  41.8  441   44-518    49-501 (502)
 30 KOG0684 Cytochrome P450 [Secon 100.0 3.1E-68 6.7E-73  475.3  36.4  443   36-517    31-485 (486)
 31 PLN02648 allene oxide synthase 100.0 1.3E-59 2.9E-64  454.7  29.8  405   33-491    14-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 5.1E-54 1.1E-58  411.5  33.7  381   60-516    25-410 (411)
 33 PHA03049 IMV membrane protein;  75.8     8.4 0.00018   25.4   4.4   41    9-49      4-44  (68)
 34 PF08492 SRP72:  SRP72 RNA-bind  61.3     6.2 0.00013   25.8   1.6    9  432-440    44-52  (59)
 35 PF05961 Chordopox_A13L:  Chord  60.1      27 0.00059   23.3   4.3   31    9-39      4-34  (68)
 36 PHA02681 ORF089 virion membran  54.1      73  0.0016   22.2   6.8   18   14-31     10-27  (92)
 37 PF12508 DUF3714:  Protein of u  52.2     4.5 9.7E-05   34.4  -0.1   43  369-413    52-94  (200)
 38 PF05952 ComX:  Bacillus compet  50.8      15 0.00033   23.8   2.1   25  332-356     4-28  (57)
 39 KOG3506 40S ribosomal protein   38.9      14 0.00031   23.3   0.6   11  453-463    12-22  (56)
 40 PF12554 MOZART1:  Mitotic-spin  38.8      98  0.0021   19.3   4.5   42  311-352     7-48  (48)
 41 PF09201 SRX:  SRX;  InterPro:   37.9      30 0.00065   27.0   2.3   23  460-482    18-40  (148)
 42 PF15330 SIT:  SHP2-interacting  36.5      96  0.0021   23.4   4.8   12   43-54     45-56  (107)
 43 PF14129 DUF4296:  Domain of un  35.1 1.7E+02  0.0037   21.0   7.4   48  308-355    31-78  (87)
 44 PF15050 SCIMP:  SCIMP protein   34.0      64  0.0014   24.4   3.4   14   37-50     69-83  (133)
 45 KOG0114 Predicted RNA-binding   33.9   2E+02  0.0044   21.5   5.8   59   36-98     12-76  (124)
 46 PF05084 GRA6:  Granule antigen  32.5 1.2E+02  0.0026   24.3   4.9   39   11-49    155-193 (215)
 47 COG0851 MinE Septum formation   32.5      67  0.0015   23.0   3.2   18  340-357    35-52  (88)
 48 COG4459 NapE Periplasmic nitra  29.6      83  0.0018   20.2   2.9    8   36-43     54-61  (62)
 49 TIGR03779 Bac_Flav_CT_M Bacter  29.4      14  0.0003   35.3  -0.7   44  368-413   254-297 (410)
 50 PF11227 DUF3025:  Protein of u  26.7      34 0.00073   29.3   1.1   25  411-435   186-211 (212)
 51 PRK06789 flagellar motor switc  25.3      68  0.0015   22.3   2.2   40  375-414    21-62  (74)
 52 PF15300 INT_SG_DDX_CT_C:  INTS  24.6   1E+02  0.0023   20.7   2.9   14  369-382    40-53  (65)
 53 PF13625 Helicase_C_3:  Helicas  24.5 1.4E+02   0.003   23.4   4.3   41   57-99     74-114 (129)
 54 PF13893 RRM_5:  RNA recognitio  24.1 1.9E+02  0.0042   18.1   4.5   34   64-97      2-39  (56)
 55 PF14459 Prok-E2_C:  Prokaryoti  23.5      69  0.0015   23.7   2.0   19  448-466   103-121 (131)
 56 PF07849 DUF1641:  Protein of u  23.1 1.1E+02  0.0023   18.5   2.5   18  331-348    13-30  (42)
 57 KOG3653 Transforming growth fa  22.6 4.2E+02  0.0092   26.2   7.5   16   68-83    221-236 (534)
 58 PLN03134 glycine-rich RNA-bind  22.4 3.1E+02  0.0068   22.0   5.9   49   46-98     38-95  (144)
 59 PLN02196 abscisic acid 8'-hydr  22.2 1.4E+02  0.0031   29.6   4.9   32   14-45     10-41  (463)
 60 PF01102 Glycophorin_A:  Glycop  20.7 1.4E+02   0.003   23.2   3.4   11   21-31     82-92  (122)
 61 PF14483 Cut8_M:  Cut8 dimerisa  20.5 1.2E+02  0.0027   17.8   2.3   12  338-349    24-35  (38)
 62 PRK10597 DNA damage-inducible   20.2 2.7E+02  0.0059   19.8   4.4   39   60-98     23-69  (81)
 63 PLN02687 flavonoid 3'-monooxyg  20.2 1.3E+02  0.0028   30.4   4.2   22    1-22      1-22  (517)
 64 PF11138 DUF2911:  Protein of u  20.2 1.3E+02  0.0029   24.2   3.2   34  394-427    52-92  (145)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.7e-88  Score=647.25  Aligned_cols=464  Identities=42%  Similarity=0.701  Sum_probs=406.2

Q ss_pred             cCCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCC-c
Q 009899           31 SNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPK-L  109 (523)
Q Consensus        31 ~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~-~  109 (523)
                      .+.+.+.||||+++|++||++++.. ..+|..++++.++|||+|.+|+|..++|||+|++.++|++++++..|++||. .
T Consensus        21 ~~~~~~lPPGP~~lPiIGnl~~l~~-~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~   99 (489)
T KOG0156|consen   21 YRKRRNLPPGPPPLPIIGNLHQLGS-LPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPT   99 (489)
T ss_pred             ccCCCCCCcCCCCCCccccHHHcCC-CchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCch
Confidence            3334889999999999999999984 3489999999999999999999999999999999999999999999999998 3


Q ss_pred             cccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHH
Q 009899          110 TVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFG  189 (523)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~  189 (523)
                      .....+.+++.+++++.+|+.||.+||+....+++...+++....-.++++.+++.+.+.    ..  ++ ++|+.+.+.
T Consensus       100 ~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~----~~--~~-~vdl~~~l~  172 (489)
T KOG0156|consen  100 ATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKS----KK--GE-PVDLSELLD  172 (489)
T ss_pred             hhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhc----CC--Cc-eeeHHHHHH
Confidence            344667767778999989999999999999999999999998887788998888888761    11  34 899999999


Q ss_pred             HHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccccccccccc-cccccc-ccccHHHHHHHHHHHHHHHH
Q 009899          190 DLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALP-FLGWLD-IGGYEKAMKKTAKELDSLIE  267 (523)
Q Consensus       190 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~l~~~~~  267 (523)
                      .++.++|++++||.++ +.   ++++...++...+.+.....+...+.+++| ++.++. ..+..++.+.....+..+++
T Consensus       173 ~~~~nvI~~~~fG~rf-~~---~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~  248 (489)
T KOG0156|consen  173 LLVGNVICRMLFGRRF-EE---EDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLE  248 (489)
T ss_pred             HHHHHHHHHHHhCCcc-cc---CCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999 43   222323568899999888888888888899 566663 33466777777777999999


Q ss_pred             HHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHH
Q 009899          268 EWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEK  346 (523)
Q Consensus       268 ~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~  346 (523)
                      +.|+++++..+. + ...|+++.||+..+++.    ...+ ++++...+.++++||+|||++|+.|++.+|++||++|+|
T Consensus       249 ~~i~eh~~~~~~-~-~~~D~vD~lL~~~~~~~----~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K  322 (489)
T KOG0156|consen  249 RIIDEHREKIGD-E-EGRDFVDALLKLMKEEK----AEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKK  322 (489)
T ss_pred             HHHHHHHhhhcc-C-CCCcHHHHHHHhhcccc----cCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHH
Confidence            999999886521 2 33899999999876542    1116 899999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCC
Q 009899          347 VKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWS  426 (523)
Q Consensus       347 l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~  426 (523)
                      +++||++++|.++.++.+|+.+||||+|||+||+|+||++|+.++|.+++|+.|+||.|||||.|+++.|++|+||++|+
T Consensus       323 ~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~  402 (489)
T KOG0156|consen  323 LQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWE  402 (489)
T ss_pred             HHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCC
Confidence            99999999998888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccC
Q 009899          427 DPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRA  506 (523)
Q Consensus       427 ~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (523)
                      ||++|+||||++++   +.+.....++|||.|+|+|||..+|.+++.++++.|+++||++++++ .+++.+. +++...+
T Consensus       403 dP~eF~PERFl~~~---d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~~  477 (489)
T KOG0156|consen  403 DPEEFKPERFLDSN---DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKKK  477 (489)
T ss_pred             CccccChhhhcCCc---cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceecC
Confidence            99999999999974   12236788999999999999999999999999999999999999987 6788766 4777788


Q ss_pred             CCceEEeeccC
Q 009899          507 TPLEILLKPRL  517 (523)
Q Consensus       507 ~~~~v~~~~r~  517 (523)
                      +|+.+...+|.
T Consensus       478 ~pl~~~~~~r~  488 (489)
T KOG0156|consen  478 KPLKAVPVPRL  488 (489)
T ss_pred             CcceeeeecCC
Confidence            89999988885


No 2  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=7.5e-81  Score=621.21  Aligned_cols=477  Identities=27%  Similarity=0.464  Sum_probs=376.5

Q ss_pred             CCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhC-CeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 009899           33 TGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYG-PLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTV  111 (523)
Q Consensus        33 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG-~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~  111 (523)
                      ++.+.||||+++|++||++.+......+.++.++.++|| +||++++|++++|+|+||+++++|+.+++..|++++....
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            456789999999999999887531223678899999999 8999999999999999999999999998888888886544


Q ss_pred             cccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHH
Q 009899          112 GKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDL  191 (523)
Q Consensus       112 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~  191 (523)
                      ...++.+..++++..+|+.|+++|+++.+.+++....+.+.+.+.++++.+++.+.+.   ..+  ++ ++|+.+.+.++
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~--~~-~vd~~~~~~~~  207 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNM---VKN--SE-PVDLRFVTRHY  207 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh---ccC--CC-ceehHHHHHHH
Confidence            4444444334578888999999999998778888777788888888888888877654   233  45 79999999999


Q ss_pred             HHHHHHHHHhcccccCcccc--cchHHHHHHHHHHHHHhhccc---cccccccccccccccccccHHHHHHHHHHHHHHH
Q 009899          192 NLNVILMMIAGKRYFGARAE--NDETEVRRYRAAIRNFFLLGG---VFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLI  266 (523)
Q Consensus       192 ~~~~i~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~  266 (523)
                      +++++++++||.++ .....  .++. ..+....++..+....   ...+.+++|++.+++..+..+..++..+.+.+++
T Consensus       208 t~~vi~~~~fG~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~  285 (543)
T PLN02971        208 CGNAIKRLMFGTRT-FSEKTEPDGGP-TLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYH  285 (543)
T ss_pred             HHHHHHHHHhCCcc-cccccccccch-hHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHH
Confidence            99999999999987 32100  0111 0122222333222111   1123345666554422233455566677788888


Q ss_pred             HHHHHHHHhhhcCC-CCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHH
Q 009899          267 EEWIEEHRRKKESG-ANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRREL  344 (523)
Q Consensus       267 ~~~i~~~~~~~~~~-~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~  344 (523)
                      .+.|+++++..+.+ .....|+++.|++..+++    ....+ ++++.+++.++++||+|||+++++|++++|++|||+|
T Consensus       286 ~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~----~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq  361 (543)
T PLN02971        286 DPIIDERIKMWREGKRTQIEDFLDIFISIKDEA----GQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEIL  361 (543)
T ss_pred             HHHHHHHHHHHhccCCCCCcCHHHHHHhhhccc----CCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHH
Confidence            99988876543221 113469999999864332    11136 8899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCC
Q 009899          345 EKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRV  424 (523)
Q Consensus       345 ~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~  424 (523)
                      +|+++||+++++.++.++++++.+|||++|||+||||++|++|..++|.+.+|++++||.||||+.|++++|++||||++
T Consensus       362 ~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~  441 (543)
T PLN02971        362 HKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKV  441 (543)
T ss_pred             HHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhh
Confidence            99999999999877889999999999999999999999999998779999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCc-ccccCcCCCccc
Q 009899          425 WSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEA-WVDMTGTAGLTN  503 (523)
Q Consensus       425 ~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~~~~~~~  503 (523)
                      |+||++|+||||+++.++......+..|+|||+|+|.|+|++||++|+++++++|+++|+++++++. .+++.+..+ +.
T Consensus       442 ~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~  520 (543)
T PLN02971        442 WSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DM  520 (543)
T ss_pred             CCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cc
Confidence            9999999999999754221112245689999999999999999999999999999999999987753 466766666 55


Q ss_pred             ccCCCceEEeeccCCCCCC
Q 009899          504 IRATPLEILLKPRLPSSLY  522 (523)
Q Consensus       504 ~~~~~~~v~~~~r~~~~~~  522 (523)
                      ..++++.|.++||-+..+|
T Consensus       521 ~~~~~~~~~~~~~~~~~~~  539 (543)
T PLN02971        521 FLSKPLVMVGELRLSEDLY  539 (543)
T ss_pred             cccccceeeeeecCCcccc
Confidence            4568999999999777776


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.9e-80  Score=583.09  Aligned_cols=464  Identities=26%  Similarity=0.368  Sum_probs=359.8

Q ss_pred             CCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 009899           32 NTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTV  111 (523)
Q Consensus        32 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~  111 (523)
                      ++.++.+|||+++|++||+..+...+.+.....+...++|+++.++.+.+|.++|+|||++++|+.++.+.|.++.....
T Consensus        27 yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~  106 (499)
T KOG0158|consen   27 YWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIY  106 (499)
T ss_pred             hhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCc
Confidence            45567999999999999999887522224444444445599999999999999999999999999999888888541111


Q ss_pred             cccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHH
Q 009899          112 GKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDL  191 (523)
Q Consensus       112 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~  191 (523)
                      ...-..-....+++..|+.||++|..++ |.||..+++.+.+++.+.++++++.+...   ...  +. .+++.+.+.++
T Consensus       107 ~d~~~~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~---~~~--~~-~~~~~dl~~~y  179 (499)
T KOG0158|consen  107 GDPEDPLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRK---SEG--GQ-EGEIKDLCARY  179 (499)
T ss_pred             CCCCCcccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHh---hcc--cC-CccHHHHHHHH
Confidence            1111011113457778999999999998 99999999999999999999999999886   332  23 68899999999


Q ss_pred             HHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhc-cccc----cccccccccccccccccHHHHHHHHHHHHHHH
Q 009899          192 NLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLL-GGVF----LVRDALPFLGWLDIGGYEKAMKKTAKELDSLI  266 (523)
Q Consensus       192 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~  266 (523)
                      |.|+|++++||.+. ++.  .+..  ..+.......+.. ....    .....+|.+....  .......+..+.+.+.+
T Consensus       180 T~DVI~~~AfG~~~-~s~--~d~~--~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v  252 (499)
T KOG0158|consen  180 TTDVIGSCAFGLDA-NSL--RDPK--AEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLV  252 (499)
T ss_pred             HHHHHhHhhcccch-hhh--cCch--HHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHH
Confidence            99999999999998 664  2333  3444433333222 1111    1122233322210  11122233445556666


Q ss_pred             HHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCC-ch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHH
Q 009899          267 EEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDF-DV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRREL  344 (523)
Q Consensus       267 ~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~-~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~  344 (523)
                      .+.++.|..+    ...+.|+++.|++...++..+.... .+ .++|+++|+.|++||.||||++++.++|+||+|||+|
T Consensus       253 ~~~v~~R~~~----~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ  328 (499)
T KOG0158|consen  253 NSRVEQREKE----NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQ  328 (499)
T ss_pred             HHHHHHHHhc----CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHH
Confidence            6666666221    1277899999999876421111111 46 8999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeeccccccc-ceeeCCCCEEEEcccccccCCC
Q 009899          345 EKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVA-EYHVPKGTRLVLNLWKLQTDPR  423 (523)
Q Consensus       345 ~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~-g~~ip~g~~v~~~~~~~~~d~~  423 (523)
                      +|||+||+++..+.+.++++.+++|+||++||+||||+||++|. +.|.+++|.+++ ++.||||+.|.++.+++||||+
T Consensus       329 ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~  407 (499)
T KOG0158|consen  329 DKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPE  407 (499)
T ss_pred             HHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccCCcc
Confidence            99999999997655559999999999999999999999999998 599999999999 9999999999999999999999


Q ss_pred             CCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccc-cCcCCCcc
Q 009899          424 VWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVD-MTGTAGLT  502 (523)
Q Consensus       424 ~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~~~~~  502 (523)
                      +||||++|+||||.+++.+   ...+..|+|||.|||.|+|..||.+|+|+++++||++|+++..+...+. .....+.+
T Consensus       408 ~~p~Pe~F~PERF~~~~~~---~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~  484 (499)
T KOG0158|consen  408 YWPEPEKFKPERFEEENNK---SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPKGFT  484 (499)
T ss_pred             cCCCcccCCCccCCCCccc---ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCcccee
Confidence            9999999999999977632   3478899999999999999999999999999999999999988832222 11223777


Q ss_pred             cccCCCceEEeeccC
Q 009899          503 NIRATPLEILLKPRL  517 (523)
Q Consensus       503 ~~~~~~~~v~~~~r~  517 (523)
                      ..|++++.+++++|+
T Consensus       485 l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  485 LSPKGGIWLKLEPRD  499 (499)
T ss_pred             eecCCceEEEEEeCC
Confidence            889999999999985


No 4  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.3e-79  Score=610.46  Aligned_cols=482  Identities=31%  Similarity=0.563  Sum_probs=384.8

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHh
Q 009899           19 ATLVVFYYLQKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTK   98 (523)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~   98 (523)
                      ++.++++++++..+++.+.||||+++|++||++.+.. .+++.++.+++++||++|++++|+.++|+++|||++++|+.+
T Consensus        11 ~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~-~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~   89 (499)
T PLN03234         11 VAAAAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEK-FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKT   89 (499)
T ss_pred             HHHHHHHHHHHhcCCCCCCCcCCCCCCeeccHHhcCC-CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHh
Confidence            3445555556666677788999999999999988863 357789999999999999999999999999999999999998


Q ss_pred             cccccCCCCCccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccc
Q 009899           99 HDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESD  178 (523)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  178 (523)
                      +...|..++...........+..+.+...++.|+++|+.+..++|+++++..+.+.+.+.++++++.+.+.   ..+  +
T Consensus        90 ~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~---~~~--~  164 (499)
T PLN03234         90 QDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKA---ADQ--S  164 (499)
T ss_pred             CCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHh---ccC--C
Confidence            87778877754332222222223345567899999999865589999999999999999999999999764   333  4


Q ss_pred             cccchHHHHHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccccccccccccccccc-ccccHHHHHH
Q 009899          179 QILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLD-IGGYEKAMKK  257 (523)
Q Consensus       179 ~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~  257 (523)
                      + ++|+.+.+..+++|+++.++||.++ +..   +.+ ..++.+.+.+.....+...+...+|++..+. ..+..++..+
T Consensus       165 ~-~vd~~~~~~~~t~dvi~~~~fG~~~-~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~  238 (499)
T PLN03234        165 G-TVDLSELLLSFTNCVVCRQAFGKRY-NEY---GTE-MKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKK  238 (499)
T ss_pred             C-eEEHHHHHHHHHHHHHHHHHhCCcc-ccc---chh-HHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHH
Confidence            4 7999999999999999999999988 542   111 2455565555443333223334455443321 1233467778


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHH
Q 009899          258 TAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSL  336 (523)
Q Consensus       258 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~  336 (523)
                      +.+.+.+++.+.|+++++...... ...|+++.|++..++++   .+..+ ++++.+++.++++||+|||+++++|++++
T Consensus       239 ~~~~~~~~~~~~i~~~~~~~~~~~-~~~d~l~~l~~~~~~~~---~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~  314 (499)
T PLN03234        239 AFKELDTYLQELLDETLDPNRPKQ-ETESFIDLLMQIYKDQP---FSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTY  314 (499)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccCC-CcccHHHHHHHHhhccC---cCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHH
Confidence            889999999999988765432221 45699999987654321   12245 88999999999999999999999999999


Q ss_pred             HhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEccc
Q 009899          337 LLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLW  416 (523)
Q Consensus       337 L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~  416 (523)
                      |++||++|+|+++|++++.++.+.++++++++|||++|||+||+|++|++|..++|.+.+|++++||.|||||.|.++++
T Consensus       315 L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~  394 (499)
T PLN03234        315 LIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAW  394 (499)
T ss_pred             HHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehH
Confidence            99999999999999999998777789999999999999999999999999986689999999999999999999999999


Q ss_pred             ccccCCCCC-CCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCc---c
Q 009899          417 KLQTDPRVW-SDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEA---W  492 (523)
Q Consensus       417 ~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~---~  492 (523)
                      ++||||++| +||++|+||||+++.+.......+..++|||+|+|.|+|+++|++|+++++|.|+++|+|+++++.   .
T Consensus       395 ~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~  474 (499)
T PLN03234        395 AVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPED  474 (499)
T ss_pred             hhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCC
Confidence            999999999 899999999999764322223356789999999999999999999999999999999999998752   2


Q ss_pred             cccCcCCCcccccCCCceEEeecc
Q 009899          493 VDMTGTAGLTNIRATPLEILLKPR  516 (523)
Q Consensus       493 ~~~~~~~~~~~~~~~~~~v~~~~r  516 (523)
                      +.+....+++..+++++.+..++|
T Consensus       475 ~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        475 IKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CCcccccccccccCCCeEEEeecC
Confidence            445556788877888888887776


No 5  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.2e-79  Score=607.03  Aligned_cols=472  Identities=32%  Similarity=0.620  Sum_probs=382.8

Q ss_pred             CCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccc
Q 009899           34 GKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGK  113 (523)
Q Consensus        34 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~  113 (523)
                      ..+.||||+++|++|+++.+.  ..++.++.+++++||+||++++|+.++|+|+||+++++++.++...|++++......
T Consensus        29 ~~~~pPgp~~~Pl~G~l~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~  106 (504)
T PLN00110         29 SRKLPPGPRGWPLLGALPLLG--NMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGAT  106 (504)
T ss_pred             cCCCcccCCCCCeeechhhcC--CchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchh
Confidence            456899999999999988775  557889999999999999999999999999999999999998877788777543222


Q ss_pred             cccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHH
Q 009899          114 LLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNL  193 (523)
Q Consensus       114 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~  193 (523)
                      ....+..+++++.+|+.|+++|+.+.+++|+.++++.+.+.+.+.++.+++.+.+.   ..+  |+ ++|+.+++..+++
T Consensus       107 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~---~~~--g~-~~~~~~~~~~~~~  180 (504)
T PLN00110        107 HLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLEL---SQR--GE-PVVVPEMLTFSMA  180 (504)
T ss_pred             hhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHh---ccC--CC-cEeHHHHHHHHHH
Confidence            12222234567778999999999998678999999999999999999999998764   333  55 7999999999999


Q ss_pred             HHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009899          194 NVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEH  273 (523)
Q Consensus       194 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  273 (523)
                      |+|+.++||.++++..  ..+.  .++...+...........+...+|++.++......++..+..+.+.+++.+.++++
T Consensus       181 ~vi~~~~fg~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  256 (504)
T PLN00110        181 NMIGQVILSRRVFETK--GSES--NEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEH  256 (504)
T ss_pred             HHHHHHHhCCcccccC--chhH--HHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999863221  1122  45666666654433332233456665554322334556667778888888888887


Q ss_pred             HhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 009899          274 RRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELD  352 (523)
Q Consensus       274 ~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  352 (523)
                      ++...... ...|+++.|++....+    ++..+ ++++.++++++++||+|||+.+++|++++|++||++|+|+++|++
T Consensus       257 ~~~~~~~~-~~~d~l~~ll~~~~~~----~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~  331 (504)
T PLN00110        257 TASAHERK-GNPDFLDVVMANQENS----TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMD  331 (504)
T ss_pred             Hhhccccc-cCCChhhHHhhccccc----CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            65433211 3468999999754322    12346 889999999999999999999999999999999999999999999


Q ss_pred             HhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCC
Q 009899          353 SVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFK  432 (523)
Q Consensus       353 ~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~  432 (523)
                      ++++.++.++++++++|||++|||+||||++|+++...+|.+.+|++++||.||+||.|.++++++|+||++|+||++|+
T Consensus       332 ~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~  411 (504)
T PLN00110        332 QVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFR  411 (504)
T ss_pred             HHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCC
Confidence            99987777899999999999999999999999999867999999999999999999999999999999999999999999


Q ss_pred             CccccCCCCCC-CCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCCceE
Q 009899          433 PERFLTAHKDV-DVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATPLEI  511 (523)
Q Consensus       433 P~R~l~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  511 (523)
                      ||||+++.... +....+..++|||+|+|.|+|++||++|+++++++|+++|++++.++.++++....+++..|+.++.+
T Consensus       412 PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (504)
T PLN00110        412 PERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSA  491 (504)
T ss_pred             cccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCceE
Confidence            99999653211 11112457999999999999999999999999999999999998876544554556788888999999


Q ss_pred             EeeccCCCCCC
Q 009899          512 LLKPRLPSSLY  522 (523)
Q Consensus       512 ~~~~r~~~~~~  522 (523)
                      ++++|.+-|.|
T Consensus       492 ~~~~r~~~~~~  502 (504)
T PLN00110        492 MVTPRLHQSAY  502 (504)
T ss_pred             eeccCCCchhc
Confidence            99999888877


No 6  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.2e-79  Score=610.83  Aligned_cols=490  Identities=36%  Similarity=0.669  Sum_probs=386.4

Q ss_pred             HHHHHHHHHHHHHhhcCC---CCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHH
Q 009899           16 GACATLVVFYYLQKWSNT---GKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMA   92 (523)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~---~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~   92 (523)
                      ++++++++++++++..+.   ..+.||||.++|++||++.+.  .+++..+.+++++||++|++++|+.++++++||+++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~   88 (517)
T PLN02687         11 TVAVSVLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQLG--PKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVA   88 (517)
T ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCccCCCCCccccHHhcC--CchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHH
Confidence            333344444444433333   345789999999999998886  567899999999999999999999999999999999


Q ss_pred             HHHHHhcccccCCCCCccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhh
Q 009899           93 KELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTK  172 (523)
Q Consensus        93 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~  172 (523)
                      ++++.++...|.+++.......++..+.+++++.+|+.|+++|+++.+++|+.++++.+.+.+.+.++.+++.+...   
T Consensus        89 ~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~---  165 (517)
T PLN02687         89 AQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ---  165 (517)
T ss_pred             HHHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh---
Confidence            99999887778877654433333333335677778999999999997678999999999999999999999999763   


Q ss_pred             cccccccccchHHHHHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccH
Q 009899          173 KKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYE  252 (523)
Q Consensus       173 ~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~  252 (523)
                      . +  ++ ++|+.+++..+++|+++.++||.++.+.. ..+.  ...+.+.+..+............+|++.++......
T Consensus       166 ~-~--~~-~vd~~~~~~~~t~dvi~~~~fG~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~  238 (517)
T PLN02687        166 H-G--TA-PVNLGQLVNVCTTNALGRAMVGRRVFAGD-GDEK--AREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVV  238 (517)
T ss_pred             c-C--CC-ceeHHHHHHHHHHHHHHHHHhCccccccC-Ccch--HHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHH
Confidence            2 2  44 79999999999999999999999873221 1111  245666666655433322222456655554322234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHH
Q 009899          253 KAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLT  331 (523)
Q Consensus       253 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~  331 (523)
                      ++..+..+.+.+++.+.++++++..+.+.....|+++.|++...+++....+..+ ++++.+++.++++||+|||+.+++
T Consensus       239 ~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~  318 (517)
T PLN02687        239 GKMKRLHRRFDAMMNGIIEEHKAAGQTGSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVE  318 (517)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccccCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHH
Confidence            5666677888899999999887654322124569999999875432111122346 889999999999999999999999


Q ss_pred             HHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEE
Q 009899          332 WALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRL  411 (523)
Q Consensus       332 ~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v  411 (523)
                      |++++|++||++|+|+++|++++.+.++.++++++++||||+|||+||||++|+++..++|.+.+|++++||.||+||.|
T Consensus       319 ~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v  398 (517)
T PLN02687        319 WAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATL  398 (517)
T ss_pred             HHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEE
Confidence            99999999999999999999999887778899999999999999999999999999867999999999999999999999


Q ss_pred             EEcccccccCCCCCCCCCCCCCccccCCCCCC--CCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCC
Q 009899          412 VLNLWKLQTDPRVWSDPLEFKPERFLTAHKDV--DVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPG  489 (523)
Q Consensus       412 ~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~  489 (523)
                      .++.+++|+||++|+||++|+||||+++....  .....+..++|||+|+|.|+|++||++|+++++++|+++|++++.+
T Consensus       399 ~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~  478 (517)
T PLN02687        399 LVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELAD  478 (517)
T ss_pred             EEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCC
Confidence            99999999999999999999999999754211  1122456899999999999999999999999999999999999876


Q ss_pred             Ccc---cccCcCCCcccccCCCceEEeeccC
Q 009899          490 EAW---VDMTGTAGLTNIRATPLEILLKPRL  517 (523)
Q Consensus       490 ~~~---~~~~~~~~~~~~~~~~~~v~~~~r~  517 (523)
                      +..   +++....+++..+..++.++++||.
T Consensus       479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        479 GQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             CCCcccCCcccccceeeecCCCeEEeeccCC
Confidence            532   3333345566666778999999995


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=7.5e-79  Score=605.06  Aligned_cols=477  Identities=34%  Similarity=0.586  Sum_probs=372.5

Q ss_pred             HHHHHHHHhhcCCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcc
Q 009899           21 LVVFYYLQKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHD  100 (523)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~  100 (523)
                      ++++++++++.+++.+.||||+++|++|+++.+.  ...+..+.+++++||++|++++|+.++|+|+||+++++|+.++.
T Consensus        21 ~~~~~~~~~~~~~~~~~ppgp~~~Pl~G~l~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~   98 (516)
T PLN02183         21 LFLFLGLISRLRRRLPYPPGPKGLPIIGNMLMMD--QLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQD   98 (516)
T ss_pred             HHHHHHHHhhccCCCCCCcCCCCCCeeccHHhcC--CcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhh
Confidence            3334444555555678899999999999998775  44567899999999999999999999999999999999999887


Q ss_pred             cccCCCCCccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccc
Q 009899          101 VDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQI  180 (523)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  180 (523)
                      ..|+.++..........++.+++++.+|+.|+++|+++..++|+.++++.+.+. .++++.+++.+...     .  ++ 
T Consensus        99 ~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~-----~--~~-  169 (516)
T PLN02183         99 SVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN-----I--GK-  169 (516)
T ss_pred             hhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc-----C--CC-
Confidence            778777754332222222234567788999999999854589999999988886 46788888887542     2  45 


Q ss_pred             cchHHHHHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHH
Q 009899          181 LLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAK  260 (523)
Q Consensus       181 ~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~  260 (523)
                      ++|+.+++..+++|+++.++||.++ +.     ..  ..+.+.+..+............+|++.++......++..+..+
T Consensus       170 ~v~~~~~~~~~~~~vi~~~~fG~~~-~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  241 (516)
T PLN02183        170 PVNIGELIFTLTRNITYRAAFGSSS-NE-----GQ--DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARK  241 (516)
T ss_pred             cEeHHHHHHHHHHHHHHhHhhcCcc-cc-----hH--HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHH
Confidence            7999999999999999999999877 32     22  2455555544333333333445666554422223556667778


Q ss_pred             HHHHHHHHHHHHHHhhhcCC------CCCCccHHHHHHHHhhhcCC-----C-CCCCch-HHHHHHHHHHHHHhhhhchH
Q 009899          261 ELDSLIEEWIEEHRRKKESG------ANLDLDFIDVLLSVLEGEGV-----D-LSDFDV-DTVIKATTMTIIVGATDTTT  327 (523)
Q Consensus       261 ~l~~~~~~~i~~~~~~~~~~------~~~~~d~~~~ll~~~~~~~~-----~-~~~~~~-~~~i~~~~~~~~~Ag~~tt~  327 (523)
                      .+.+++.+.|++++++...+      .....|+++.|++...++..     + ..+..+ ++++.+++.++++||+|||+
T Consensus       242 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa  321 (516)
T PLN02183        242 SLDGFIDDIIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVA  321 (516)
T ss_pred             HHHHHHHHHHHHHHHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHH
Confidence            88888888888776532211      11346899999986543210     0 011246 88999999999999999999


Q ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCC
Q 009899          328 VNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPK  407 (523)
Q Consensus       328 ~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~  407 (523)
                      .+++|++++|++||++|+|+++|++++++.++.++++++++|||++|||+||||++|++|.. .|.+.+|++++||.|||
T Consensus       322 ~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPk  400 (516)
T PLN02183        322 SAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPK  400 (516)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECC
Confidence            99999999999999999999999999988666789999999999999999999999999986 79999999999999999


Q ss_pred             CCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceec
Q 009899          408 GTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDIST  487 (523)
Q Consensus       408 g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~  487 (523)
                      ||+|.++.+++||||++|+||++|+||||++++.. +....+..|+|||+|+|.|+|++||++|+++++|+|+++|++++
T Consensus       401 Gt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~-~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~  479 (516)
T PLN02183        401 RSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVP-DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWEL  479 (516)
T ss_pred             CCEEEEehhhhcCCccccCCccccCchhhCCCCCc-cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEc
Confidence            99999999999999999999999999999975421 11234568999999999999999999999999999999999998


Q ss_pred             CCCcc---cccCcCCCcccccCCCceEEeeccCC
Q 009899          488 PGEAW---VDMTGTAGLTNIRATPLEILLKPRLP  518 (523)
Q Consensus       488 ~~~~~---~~~~~~~~~~~~~~~~~~v~~~~r~~  518 (523)
                      .++..   .+.....+.+..+.+++.+.+++|-.
T Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  513 (516)
T PLN02183        480 PDGMKPSELDMNDVFGLTAPRATRLVAVPTYRLQ  513 (516)
T ss_pred             CCCCCCCCCChhhccccccccCCCcEEEeecCCC
Confidence            77632   33333445555556789999999944


No 8  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.2e-78  Score=605.28  Aligned_cols=490  Identities=33%  Similarity=0.620  Sum_probs=389.9

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhc
Q 009899           20 TLVVFYYLQKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKH   99 (523)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~   99 (523)
                      .++++.++.++.+++.+.||||+++|++||++.+.  ..++..+.+++++||++|++++|+.++++++||+++++|+.++
T Consensus        16 ~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~   93 (514)
T PLN03112         16 NVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLG--PLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQ   93 (514)
T ss_pred             HHHHHHHccccccCCCCCccCCCCCCeeeeHHhcC--CchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhC
Confidence            34445555666667778999999999999998876  6678899999999999999999999999999999999999888


Q ss_pred             ccccCCCCCccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhccccccc
Q 009899          100 DVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQ  179 (523)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  179 (523)
                      ...|++++..........+...+++..+|+.|+++|+.+.+++|+.++++.+.+.+.+.++.+++.+.+.   ...  ++
T Consensus        94 ~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~---~~~--~~  168 (514)
T PLN03112         94 DDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEA---AQT--GK  168 (514)
T ss_pred             CcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHh---hcc--CC
Confidence            7778877764332222222224456778999999999976578999999999999999999999988664   222  55


Q ss_pred             ccchHHHHHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHH
Q 009899          180 ILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTA  259 (523)
Q Consensus       180 ~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~  259 (523)
                       ++|+.+.++.+++++++.++||.++.+.. +...+....+...+..++.......+...+|++.++......++..+..
T Consensus       169 -~vd~~~~~~~~~~~vi~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  246 (514)
T PLN03112        169 -PVNLREVLGAFSMNNVTRMLLGKQYFGAE-SAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVE  246 (514)
T ss_pred             -eeeHHHHHHHHHHHHHHHHHcCCcccccc-ccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHH
Confidence             79999999999999999999999872221 1111112456666666554333323344566655543333456667778


Q ss_pred             HHHHHHHHHHHHHHHhhhcCC--CCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHH
Q 009899          260 KELDSLIEEWIEEHRRKKESG--ANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSL  336 (523)
Q Consensus       260 ~~l~~~~~~~i~~~~~~~~~~--~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~  336 (523)
                      +.+.+++.+.++++++..+..  .....|+++.|++...++    ....+ ++++.+++..+++||+|||+.+++|++++
T Consensus       247 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~----~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~  322 (514)
T PLN03112        247 KRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGEN----GKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAE  322 (514)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhccc----cccCCCHHHHHHHHHHHhccccccHHHHHHHHHHH
Confidence            888889999998877643221  113469999999865432    12245 88999999999999999999999999999


Q ss_pred             HhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEccc
Q 009899          337 LLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLW  416 (523)
Q Consensus       337 L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~  416 (523)
                      |++||++|+|+++||+++++.++.++++++++|||++|||+||+|++|++|...+|.+.+|++++||.|||||.|.++++
T Consensus       323 L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~  402 (514)
T PLN03112        323 VIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTH  402 (514)
T ss_pred             HHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehH
Confidence            99999999999999999998777789999999999999999999999999986689999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCccccCCCCCC-CC-CCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCc---
Q 009899          417 KLQTDPRVWSDPLEFKPERFLTAHKDV-DV-KGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEA---  491 (523)
Q Consensus       417 ~~~~d~~~~~~p~~F~P~R~l~~~~~~-~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~---  491 (523)
                      ++||||++|+||++|+||||+.+.+.. .. ...+..++|||+|+|.|+|++||++|++++++.|+++|+|++.++.   
T Consensus       403 ~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~  482 (514)
T PLN03112        403 GLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPE  482 (514)
T ss_pred             HhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcc
Confidence            999999999999999999987543211 11 1234689999999999999999999999999999999999987653   


Q ss_pred             ccccCcCCCcccccCCCceEEeeccCCCCCC
Q 009899          492 WVDMTGTAGLTNIRATPLEILLKPRLPSSLY  522 (523)
Q Consensus       492 ~~~~~~~~~~~~~~~~~~~v~~~~r~~~~~~  522 (523)
                      .+++....+++..+++++.++++||..--.|
T Consensus       483 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~  513 (514)
T PLN03112        483 DIDTQEVYGMTMPKAKPLRAVATPRLAPHLY  513 (514)
T ss_pred             cCCCccccCcccccCCCeEEEeecCCccccc
Confidence            2334445567777788999999999876666


No 9  
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.8e-78  Score=600.49  Aligned_cols=474  Identities=27%  Similarity=0.466  Sum_probs=362.1

Q ss_pred             HHhhcCCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCC
Q 009899           27 LQKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSR  106 (523)
Q Consensus        27 ~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~  106 (523)
                      ..+...++.+.||||+++|++|+++.+.. ...+..+.+++++||+||++++|++++|+|+||+.+++|+.++...|.++
T Consensus        21 ~~~~~~~~~~~pPgp~~~p~~g~l~~~~~-~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r   99 (503)
T PLN02394         21 VSKLRGKKLKLPPGPAAVPIFGNWLQVGD-DLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSR   99 (503)
T ss_pred             HHHHhcCcCCCCcCCCCCCeeeeHHhcCC-CchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCC
Confidence            44455677889999999999999988763 33578999999999999999999999999999999999998877777766


Q ss_pred             CCccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHH
Q 009899          107 PKLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKK  186 (523)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~  186 (523)
                      +.......+...+.+.+++.+|+.|+++||.+..++|+.++++.+.+.+.+.++.+++.+...   ... .++ .+|+.+
T Consensus       100 ~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~---~~~-~~~-~v~~~~  174 (503)
T PLN02394        100 TRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRAN---PEA-ATE-GVVIRR  174 (503)
T ss_pred             CCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHh---hhc-cCC-cEecHH
Confidence            654433333222334567778999999999987689999999999999999999999998764   211 133 689999


Q ss_pred             HHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccc--ccccccccccccccccccHHHHHHHHHHHHH
Q 009899          187 WFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGV--FLVRDALPFLGWLDIGGYEKAMKKTAKELDS  264 (523)
Q Consensus       187 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~  264 (523)
                      .++.+++|+++.++||.++ +..   ++..+..+.....+.......  ..+...+|++.+. .....+..........+
T Consensus       175 ~~~~~~~dvi~~~~fG~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  249 (503)
T PLN02394        175 RLQLMMYNIMYRMMFDRRF-ESE---DDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLA  249 (503)
T ss_pred             HHHHHHHHHHHHHHhCCCc-ccc---cchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHH
Confidence            9999999999999999998 542   222123333333322221111  1112334433221 01111222222222222


Q ss_pred             -HHHHHHHHHHhhhcC---CCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhc
Q 009899          265 -LIEEWIEEHRRKKES---GANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLN  339 (523)
Q Consensus       265 -~~~~~i~~~~~~~~~---~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~  339 (523)
                       +....++++++..+.   ......|+++.|++...++       .+ ++++..++.++++||+||||.+++|++++|++
T Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-------~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~  322 (503)
T PLN02394        250 LFKDYFVDERKKLMSAKGMDKEGLKCAIDHILEAQKKG-------EINEDNVLYIVENINVAAIETTLWSIEWGIAELVN  322 (503)
T ss_pred             HHHHHHHHHHHHHhhhccCCcchhhhHHHHHHhccccC-------CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHc
Confidence             333455555443211   1113468999999865332       35 77899999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccc
Q 009899          340 NRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQ  419 (523)
Q Consensus       340 ~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~  419 (523)
                      ||++|+||++||+++++.++.++++++++||||+|||+||||++|++|...+|.+.+|++++||.||+||.|.+++|++|
T Consensus       323 ~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~  402 (503)
T PLN02394        323 HPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLA  402 (503)
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHh
Confidence            99999999999999998766789999999999999999999999999988789999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCc-ccccCcC
Q 009899          420 TDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEA-WVDMTGT  498 (523)
Q Consensus       420 ~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~~  498 (523)
                      |||++|+||++|+||||++++++......+..++|||+|+|.|+|++||++|+++++|.|+++|++++.++. .+++...
T Consensus       403 rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  482 (503)
T PLN02394        403 NNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEK  482 (503)
T ss_pred             CCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccc
Confidence            999999999999999999754221112246689999999999999999999999999999999999987764 3555544


Q ss_pred             CC-cccccCCCceEEeeccCC
Q 009899          499 AG-LTNIRATPLEILLKPRLP  518 (523)
Q Consensus       499 ~~-~~~~~~~~~~v~~~~r~~  518 (523)
                      .+ +....+.++.|+++||+.
T Consensus       483 ~~~~~~~~~~~~~~~~~~r~~  503 (503)
T PLN02394        483 GGQFSLHIAKHSTVVFKPRSA  503 (503)
T ss_pred             cCceeeccCCCceEEeecCCC
Confidence            43 455467899999999974


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=7.6e-77  Score=591.12  Aligned_cols=470  Identities=25%  Similarity=0.417  Sum_probs=367.6

Q ss_pred             CCCCCCCCCCCCccccccccccC-CCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 009899           33 TGKKPPEAAGKWPMIGHLHLLAG-PQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTV  111 (523)
Q Consensus        33 ~~~~~~pgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~  111 (523)
                      +..+.||||+++|++||++.+.. ...++..+.+++++||++|++++|+.++|+|+||+++++++.++...|+.++....
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            34568999999999999986642 23467889999999999999999999999999999999999988888888876544


Q ss_pred             cccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHH
Q 009899          112 GKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDL  191 (523)
Q Consensus       112 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~  191 (523)
                      ....+.+...+.+..+|+.|+++||.+.+++|+.++++.+.+.+.+.++.+++.+.+.   ...  ++ .+|+.+.+..+
T Consensus       112 ~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~---~~~--~~-~v~~~~~~~~~  185 (519)
T PLN00168        112 SRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRRE---AED--AA-APRVVETFQYA  185 (519)
T ss_pred             hhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHh---cCC--CC-CcCHHHHHHHH
Confidence            3444432222333467999999998555589999999999999999999999999764   322  44 68999999999


Q ss_pred             HHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcc-ccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Q 009899          192 NLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLG-GVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWI  270 (523)
Q Consensus       192 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i  270 (523)
                      +.++++.++||.++ +.   ...   ..+........... ....+...+|.+.+.......++..+..+.+.+++.+.|
T Consensus       186 ~~~ii~~~~fG~~~-~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  258 (519)
T PLN00168        186 MFCLLVLMCFGERL-DE---PAV---RAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLI  258 (519)
T ss_pred             HHHHHHHHHcCCCc-Ch---hhH---HHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987 32   111   23333333322111 112223445644322111223455567888888999999


Q ss_pred             HHHHhhhcC----C--C----CCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhc
Q 009899          271 EEHRRKKES----G--A----NLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLN  339 (523)
Q Consensus       271 ~~~~~~~~~----~--~----~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~  339 (523)
                      +++++....    +  .    ....|+++.|++....+.   .+..+ ++++.+++.++++||+|||+.+++|++++|++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~---~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~  335 (519)
T PLN00168        259 DARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPED---GDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVK  335 (519)
T ss_pred             HHHHHHhhhccccCccccccccccccHHHHHHhhhcccc---ccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHh
Confidence            887654211    1  0    014589999997643220   12346 88999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHhhCCC-CCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEccccc
Q 009899          340 NRRELEKVKKELDSVVGKE-RLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKL  418 (523)
Q Consensus       340 ~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~  418 (523)
                      ||++|+|+++||+++++.+ +.++++++.+||||+|||+||+|++|+++..++|.+.+|++++||.|||||.|.++++++
T Consensus       336 ~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~  415 (519)
T PLN00168        336 NPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEM  415 (519)
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHH
Confidence            9999999999999998753 568999999999999999999999999998779999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCccccCCCCC--CC-CCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCccccc
Q 009899          419 QTDPRVWSDPLEFKPERFLTAHKD--VD-VKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDM  495 (523)
Q Consensus       419 ~~d~~~~~~p~~F~P~R~l~~~~~--~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~  495 (523)
                      ||||++|+||++|+||||+++...  .+ ....+..++|||.|+|.|+|++||++|++++++.|+++|+|++.++.+++.
T Consensus       416 ~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~  495 (519)
T PLN00168        416 GRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDF  495 (519)
T ss_pred             hcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCCh
Confidence            999999999999999999975321  11 112356899999999999999999999999999999999999877654444


Q ss_pred             CcCCCcccccCCCceEEeeccCC
Q 009899          496 TGTAGLTNIRATPLEILLKPRLP  518 (523)
Q Consensus       496 ~~~~~~~~~~~~~~~v~~~~r~~  518 (523)
                      ....+++..++++++|++++|+.
T Consensus       496 ~~~~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        496 AEKREFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             hhhceeEEeecCCcEEEEEeccC
Confidence            43345566778899999999975


No 11 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=7.2e-77  Score=589.46  Aligned_cols=468  Identities=28%  Similarity=0.531  Sum_probs=362.6

Q ss_pred             cCCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc
Q 009899           31 SNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT  110 (523)
Q Consensus        31 ~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~  110 (523)
                      ..+..+.||||+++|++||++.+.. .+++..+.+++++||++|++++|+.++|+|+||+++++|+.++...|.+++...
T Consensus        24 ~~~~~~~ppgp~~~p~~G~l~~l~~-~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~  102 (502)
T PLN02966         24 KTKRYKLPPGPSPLPVIGNLLQLQK-LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHR  102 (502)
T ss_pred             ccCCCCCCcCCCCCCeeccHHhcCC-CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCc
Confidence            3445578999999999999988853 467889999999999999999999999999999999999998776676665433


Q ss_pred             ccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHH
Q 009899          111 VGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGD  190 (523)
Q Consensus       111 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~  190 (523)
                      .......+.....+..+|+.|+++|+.+..++|+.+++..+.+.+.+.++++++.+.+.   ...  ++ ++|+.+++..
T Consensus       103 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~---~~~--~~-~vdl~~~~~~  176 (502)
T PLN02966        103 GHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKA---ADK--SE-VVDISELMLT  176 (502)
T ss_pred             cceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh---ccC--CC-ceeHHHHHHH
Confidence            22222233323445667999999999955589999999999999999999999999764   333  55 7999999999


Q ss_pred             HHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccccccccccccccccc-ccccHHHHHHHHHHHHHHHHHH
Q 009899          191 LNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLD-IGGYEKAMKKTAKELDSLIEEW  269 (523)
Q Consensus       191 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~l~~~~~~~  269 (523)
                      +++|+++.++||.++ +..   +++ ...+.+++...........+...+|++..+. .....+......+...+++.+.
T Consensus       177 ~t~dvi~~~~fG~~~-~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (502)
T PLN02966        177 FTNSVVCRQAFGKKY-NED---GEE-MKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEV  251 (502)
T ss_pred             HHHHHHHHHHhCCcc-Ccc---chH-HHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHH
Confidence            999999999999988 542   121 2455555555443333322334455432221 1112233344555666777777


Q ss_pred             HHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHH
Q 009899          270 IEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVK  348 (523)
Q Consensus       270 i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~  348 (523)
                      ++++........ ...|+++.|++..+++.   .+..+ ++++.++++++++||+|||+.+++|++++|++||++|+|++
T Consensus       252 i~~~~~~~~~~~-~~~~~l~~l~~~~~~~~---~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~  327 (502)
T PLN02966        252 VNETLDPKRVKP-ETESMIDLLMEIYKEQP---FASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQ  327 (502)
T ss_pred             HHHHHhcccccc-ccccHHHHHHHHHhccC---cCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHH
Confidence            766544321111 34689999998654321   12235 88999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCC--CCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCC-
Q 009899          349 KELDSVVGKE--RLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVW-  425 (523)
Q Consensus       349 ~Ei~~~~~~~--~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~-  425 (523)
                      +||+++.+.+  +.++++++++||||+|||+||||++|++|...+|.+.+|++++||.||+||.|.++++++||||++| 
T Consensus       328 ~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g  407 (502)
T PLN02966        328 AEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWG  407 (502)
T ss_pred             HHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCccccc
Confidence            9999998642  3578999999999999999999999999986689999999999999999999999999999999999 


Q ss_pred             CCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcc---cccCcCCCcc
Q 009899          426 SDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAW---VDMTGTAGLT  502 (523)
Q Consensus       426 ~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~---~~~~~~~~~~  502 (523)
                      +||++|+||||++++..  ....+..++|||+|+|.|+|++||++|+++++|.|+++|+|++.++..   +++....+++
T Consensus       408 ~dP~~F~PeRwl~~~~~--~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~  485 (502)
T PLN02966        408 PNPDEFRPERFLEKEVD--FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLA  485 (502)
T ss_pred             CChhhCChhhhcCCCCC--cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCee
Confidence            99999999999975421  123467899999999999999999999999999999999999877632   3334455666


Q ss_pred             cccCCCceEEeecc
Q 009899          503 NIRATPLEILLKPR  516 (523)
Q Consensus       503 ~~~~~~~~v~~~~r  516 (523)
                      ..++++++++.+|.
T Consensus       486 ~~~~~~~~~~~~~~  499 (502)
T PLN02966        486 MHKSQHLKLVPEKV  499 (502)
T ss_pred             eccCCCeEEEEEeC
Confidence            64555676665554


No 12 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=4.2e-77  Score=589.77  Aligned_cols=457  Identities=24%  Similarity=0.378  Sum_probs=359.9

Q ss_pred             CCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 009899           32 NTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTV  111 (523)
Q Consensus        32 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~  111 (523)
                      +.....+|||+++|++||++.+.  .+++..+.+++++||++|++++|+.++|+++||+++++|+.++...|..++....
T Consensus        25 ~~~~~~~pgp~~~p~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~  102 (482)
T PTZ00404         25 KIHKNELKGPIPIPILGNLHQLG--NLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPS  102 (482)
T ss_pred             hccCCCCCCCCCCCeeccHhhhc--ccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcce
Confidence            34467899999999999998886  5678999999999999999999999999999999999999887666766665432


Q ss_pred             cccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHH
Q 009899          112 GKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDL  191 (523)
Q Consensus       112 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~  191 (523)
                      ...... +.+ ++..+|+.|+++|+++. +.|+.++++.+.+.+.+.++.+++.+.+.   .+.  ++ .+|+..++..+
T Consensus       103 ~~~~~~-~~~-l~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~---~~~--~~-~vd~~~~~~~~  173 (482)
T PTZ00404        103 IKHGTF-YHG-IVTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKI---ESS--GE-TFEPRYYLTKF  173 (482)
T ss_pred             eeeecc-CCc-eeccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHH---Hhc--CC-ccCHHHHHHHH
Confidence            211111 223 45568999999999998 89999999999999999999999998764   322  54 79999999999


Q ss_pred             HHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Q 009899          192 NLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIE  271 (523)
Q Consensus       192 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~  271 (523)
                      ++|+++.++||.++ +...+........+...+..++...........++++.... ........+..+.+.+++.+.++
T Consensus       174 ~~dvi~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~  251 (482)
T PTZ00404        174 TMSAMFKYIFNEDI-SFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKEKYH  251 (482)
T ss_pred             HHHHHHHHHhcccc-ccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987 43211001112456666665554333222222222222110 11122334556677777777777


Q ss_pred             HHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHH
Q 009899          272 EHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKEL  351 (523)
Q Consensus       272 ~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  351 (523)
                      ++++..+..  ...|+++.|++...+.    ++.. .+++.+++.++++||+|||+.+++|++++|++||++|+||++|+
T Consensus       252 ~~~~~~~~~--~~~dll~~ll~~~~~~----~~~~-~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei  324 (482)
T PTZ00404        252 EHLKTIDPE--VPRDLLDLLIKEYGTN----TDDD-ILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEI  324 (482)
T ss_pred             HHHHccCCC--CcccHHHHHHHHhccC----Cccc-HHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence            665532221  4569999999864321    1111 34588899999999999999999999999999999999999999


Q ss_pred             HHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccc-cceeeCCCCEEEEcccccccCCCCCCCCCC
Q 009899          352 DSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTV-AEYHVPKGTRLVLNLWKLQTDPRVWSDPLE  430 (523)
Q Consensus       352 ~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~  430 (523)
                      +++++.++.++++++++|||++|||+||||++|++|..++|.+.+|+++ +||.||+||.|.++.+++||||++|+||++
T Consensus       325 ~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~  404 (482)
T PTZ00404        325 KSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQ  404 (482)
T ss_pred             HHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccc
Confidence            9999876678999999999999999999999999997669999999999 999999999999999999999999999999


Q ss_pred             CCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCCce
Q 009899          431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATPLE  510 (523)
Q Consensus       431 F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (523)
                      |+||||+++.       .+..++|||+|+|.|+|++||++|+++++++|+++|++++.++.++++....+++.. +.++.
T Consensus       405 F~PeRwl~~~-------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~  476 (482)
T PTZ00404        405 FDPSRFLNPD-------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFK  476 (482)
T ss_pred             cCccccCCCC-------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCce
Confidence            9999998643       356899999999999999999999999999999999999876654444445567776 57899


Q ss_pred             EEeecc
Q 009899          511 ILLKPR  516 (523)
Q Consensus       511 v~~~~r  516 (523)
                      |++++|
T Consensus       477 v~~~~R  482 (482)
T PTZ00404        477 VLLEKR  482 (482)
T ss_pred             eeeecC
Confidence            999987


No 13 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.7e-75  Score=574.17  Aligned_cols=460  Identities=25%  Similarity=0.445  Sum_probs=364.8

Q ss_pred             CCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccccccC
Q 009899           38 PEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGH  117 (523)
Q Consensus        38 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~~~~  117 (523)
                      ||||+++|++||++.+.. .+++..+.+|+++||++|++++|+.++|+|+||+++++|+.++...|++++.......++.
T Consensus         1 ppgp~~lP~iG~l~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~   79 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE-KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTR   79 (466)
T ss_pred             CcCCCCCCccccHHHcCC-CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhc
Confidence            789999999999988864 5578999999999999999999999999999999999999988878877764433332333


Q ss_pred             CCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHHHHHH
Q 009899          118 NYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVIL  197 (523)
Q Consensus       118 ~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~  197 (523)
                      ++..+.+..+|+.|+++|+.+.+++|+...++.+.+.+.+.++.+++.+.+.   ...++++ ++|+.+.++.+++|+++
T Consensus        80 ~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~-~vd~~~~~~~~t~dvi~  155 (466)
T PLN02655         80 DKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHAL---VKDDPHS-PVNFRDVFENELFGLSL  155 (466)
T ss_pred             CCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhh---ccccCCC-ceeHHHHHHHHHHHHHH
Confidence            2323444456999999999887789998888999999999999998888764   2221255 79999999999999999


Q ss_pred             HHHhcccccCcccccc-hHH---HHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009899          198 MMIAGKRYFGARAEND-ETE---VRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEH  273 (523)
Q Consensus       198 ~~~fG~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  273 (523)
                      .++||.++ +.....+ ...   ...+...+..++.......+...+|++.+++.....+...+....+.+++++.++++
T Consensus       156 ~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  234 (466)
T PLN02655        156 IQALGEDV-ESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQ  234 (466)
T ss_pred             HHHhcccc-ccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999987 4321011 000   022333444444333222334566766655332223333334445567888888877


Q ss_pred             HhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 009899          274 RRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELD  352 (523)
Q Consensus       274 ~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  352 (523)
                      +++...+. ...|+++.|++...         .+ ++++.+++.++++||+|||+.+++|++++|++||++|+++++||+
T Consensus       235 ~~~~~~~~-~~~d~l~~ll~~~~---------~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~  304 (466)
T PLN02655        235 KKRIARGE-ERDCYLDFLLSEAT---------HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIR  304 (466)
T ss_pred             HHhhcCCC-CcccHHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            76533332 34689999997531         34 788999999999999999999999999999999999999999999


Q ss_pred             HhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCC
Q 009899          353 SVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFK  432 (523)
Q Consensus       353 ~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~  432 (523)
                      ++.+.+. ++++++++|||++|||+||||++|+++...+|.+.+|++++||.|||||.|.++.+++||||++|+||++|+
T Consensus       305 ~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~  383 (466)
T PLN02655        305 EVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWD  383 (466)
T ss_pred             HHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccC
Confidence            9988644 899999999999999999999999999877899999999999999999999999999999999999999999


Q ss_pred             CccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCCceEE
Q 009899          433 PERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATPLEIL  512 (523)
Q Consensus       433 P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  512 (523)
                      ||||+++.+.   ......++|||+|+|.|+|++||..|+++++++||++|++++.++.. +.....+++..+++++.|+
T Consensus       384 PeR~~~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  459 (466)
T PLN02655        384 PERFLGEKYE---SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQKLHPLHAH  459 (466)
T ss_pred             ccccCCCCcc---cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEeecCCcEEE
Confidence            9999975421   11346899999999999999999999999999999999999876542 2234567778888999999


Q ss_pred             eeccCC
Q 009899          513 LKPRLP  518 (523)
Q Consensus       513 ~~~r~~  518 (523)
                      +++|+.
T Consensus       460 ~~~r~~  465 (466)
T PLN02655        460 LKPRGS  465 (466)
T ss_pred             EeecCC
Confidence            999974


No 14 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.1e-75  Score=584.28  Aligned_cols=456  Identities=23%  Similarity=0.333  Sum_probs=353.1

Q ss_pred             CCCCCCCCCCCccccccccccC-----------------CCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHH
Q 009899           34 GKKPPEAAGKWPMIGHLHLLAG-----------------PQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELF   96 (523)
Q Consensus        34 ~~~~~pgp~~~p~~G~~~~~~~-----------------~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il   96 (523)
                      ....||||+++|++||++.+..                 .......+.+|+++||++|++|+|+.++|+|+||+++++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            4567999999999999887641                 01223356889999999999999999999999999999999


Q ss_pred             HhcccccCCCCCccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccc
Q 009899           97 TKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNE  176 (523)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~  176 (523)
                      .++.. +..++...........+.+ ++..+|+.|+++|+++. +.|+.++++.+.+.+.++++.+++.+.+.   .+. 
T Consensus       120 ~~~~~-~~~r~~~~~~~~~~~~g~~-l~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~---~~~-  192 (516)
T PLN02290        120 TKYNT-VTGKSWLQQQGTKHFIGRG-LLMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKA---VES-  192 (516)
T ss_pred             hcCCC-CCCCcchhhhHHHHHhcCC-ccccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHH---Hhc-
Confidence            87633 4444432111111111223 35567999999999998 88999999999999999999999999764   222 


Q ss_pred             cccccchHHHHHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHH
Q 009899          177 SDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMK  256 (523)
Q Consensus       177 ~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~  256 (523)
                      +++ ++|+.++++.+++|+++.++||.++ +.   .  +   ++...+..+............+|++.+++ ....++.+
T Consensus       193 ~~~-~vd~~~~~~~~~~~vi~~~~fG~~~-~~---~--~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~  261 (516)
T PLN02290        193 GQT-EVEIGEYMTRLTADIISRTEFDSSY-EK---G--K---QIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIK  261 (516)
T ss_pred             CCc-eEEhHHHHHHHHHHHHHHHHcCCcc-cc---c--h---HHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHH
Confidence            134 7899999999999999999999987 32   1  1   11122222211111111111244443332 22345566


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCC--CCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHH
Q 009899          257 KTAKELDSLIEEWIEEHRRKKESG--ANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWA  333 (523)
Q Consensus       257 ~~~~~l~~~~~~~i~~~~~~~~~~--~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~  333 (523)
                      ...+.+.+++.+.|+++++..+.+  .....|+++.+++...+..  .++..+ ++++.+++.++++||+|||+++++|+
T Consensus       262 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~  339 (516)
T PLN02290        262 SLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKR--SNGFNLNLQLIMDECKTFFFAGHETTALLLTWT  339 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccC--CCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            677788899999998887643321  1134699999998644221  112235 77899999999999999999999999


Q ss_pred             HHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEE
Q 009899          334 LSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVL  413 (523)
Q Consensus       334 l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~  413 (523)
                      +++|++||++|+|+++|++++++.+ .++++++++||||+|||+||||++|+++. ++|.+.+|++++||.||+||.|.+
T Consensus       340 l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~  417 (516)
T PLN02290        340 LMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWI  417 (516)
T ss_pred             HHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEe
Confidence            9999999999999999999998864 78999999999999999999999999996 599999999999999999999999


Q ss_pred             cccccccCCCCC-CCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcc
Q 009899          414 NLWKLQTDPRVW-SDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAW  492 (523)
Q Consensus       414 ~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~  492 (523)
                      +.+++||||++| +||++|+||||++...     ..+..++|||.|+|.|+|++||++|++++++.|+++|++++.++..
T Consensus       418 ~~~~~~rdp~~~~~dP~~F~PeRfl~~~~-----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~  492 (516)
T PLN02290        418 PVLAIHHSEELWGKDANEFNPDRFAGRPF-----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR  492 (516)
T ss_pred             cHHHhcCChhhhCCChhhcCccccCCCCC-----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc
Confidence            999999999999 8999999999995421     1345799999999999999999999999999999999999877532


Q ss_pred             cccCcCCCcccccCCCceEEeeccCC
Q 009899          493 VDMTGTAGLTNIRATPLEILLKPRLP  518 (523)
Q Consensus       493 ~~~~~~~~~~~~~~~~~~v~~~~r~~  518 (523)
                        .....+++..|+.+++|++++|++
T Consensus       493 --~~~~~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        493 --HAPVVVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             --cCccceeeecCCCCCeEEEEeCCC
Confidence              122335778899999999999986


No 15 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.3e-73  Score=564.50  Aligned_cols=469  Identities=26%  Similarity=0.438  Sum_probs=354.0

Q ss_pred             CCCCCCCCCccccccccccCCCCc-hHHHHHHHHhh-CCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccc
Q 009899           36 KPPEAAGKWPMIGHLHLLAGPQLP-HLALGALADKY-GPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGK  113 (523)
Q Consensus        36 ~~~pgp~~~p~~G~~~~~~~~~~~-~~~~~~~~~ky-G~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~  113 (523)
                      +.||||+++|++||++.+.. ..+ ..+++++.++| |+||++++|++++|+|+||+.+++++.+++..|++++......
T Consensus        40 ~~PPgp~~~P~iGnl~~l~~-~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~  118 (534)
T PLN03018         40 QLPPGPPGWPILGNLPELIM-TRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME  118 (534)
T ss_pred             CCCcCCCCCCeeccHHHhcc-CCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence            47999999999999998752 222 23466666666 7999999999999999999999999998877788887654444


Q ss_pred             cccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHH
Q 009899          114 LLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNL  193 (523)
Q Consensus       114 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~  193 (523)
                      .++.++.++.+..+|+.|+++|+++.+.+++......+......+++.+++.+.+.   ...  ++ ++|+.+.+..+++
T Consensus       119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~--~~-~vd~~~~~~~~t~  192 (534)
T PLN03018        119 TIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSM---YQR--SE-TVDVRELSRVYGY  192 (534)
T ss_pred             hhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh---ccc--CC-ceeHHHHHHHHHH
Confidence            44443334666667999999999998555666656666667767788899988764   222  44 7999999999999


Q ss_pred             HHHHHHHhcccccCcccc---cchHHHHHHHHHHHHHhh---cccccccccccc-ccccccccccHHHHHHHHHHHHHHH
Q 009899          194 NVILMMIAGKRYFGARAE---NDETEVRRYRAAIRNFFL---LGGVFLVRDALP-FLGWLDIGGYEKAMKKTAKELDSLI  266 (523)
Q Consensus       194 ~~i~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~l~~~~  266 (523)
                      |+++.++||.++ +....   .+......+...+.....   ........+.+| ++.+........+.....+.+.+++
T Consensus       193 ~vi~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  271 (534)
T PLN03018        193 AVTMRMLFGRRH-VTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYN  271 (534)
T ss_pred             HHHHHHHhCCcc-ccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHH
Confidence            999999999987 43110   011100112212221111   111111112233 3332211122344555566788888


Q ss_pred             HHHHHHHHhhhc-C-CCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHH
Q 009899          267 EEWIEEHRRKKE-S-GANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRE  343 (523)
Q Consensus       267 ~~~i~~~~~~~~-~-~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~  343 (523)
                      .+.++++++... . +.....|+++.|++..+++    ....+ ++++.+++.++++||+|||+.+++|++++|++||++
T Consensus       272 ~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~----~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~  347 (534)
T PLN03018        272 NPIIDERVELWREKGGKAAVEDWLDTFITLKDQN----GKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEI  347 (534)
T ss_pred             HHHHHHHHHHhhhccCCCCcccHHHHHHHhhccc----CCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH
Confidence            888888765422 1 1113469999999865432    11135 889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCC
Q 009899          344 LEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPR  423 (523)
Q Consensus       344 ~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~  423 (523)
                      |+++++||+++++.++.++.+++.+|||++|||+||||++|++|...+|.+.+|++++||.||||+.|.++.+++|+||+
T Consensus       348 q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~  427 (534)
T PLN03018        348 LRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPK  427 (534)
T ss_pred             HHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcc
Confidence            99999999999987778899999999999999999999999999876799999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccccCCCCCCC---CCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCc-ccccCcCC
Q 009899          424 VWSDPLEFKPERFLTAHKDVD---VKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEA-WVDMTGTA  499 (523)
Q Consensus       424 ~~~~p~~F~P~R~l~~~~~~~---~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~~~  499 (523)
                      +|+||++|+||||++.++...   ....+..++|||+|+|.|+|++||++|+++++++|+++|++++.++. .++.....
T Consensus       428 ~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~  507 (534)
T PLN03018        428 IWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDD  507 (534)
T ss_pred             cCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCccccc
Confidence            999999999999997542110   11245689999999999999999999999999999999999987653 33443344


Q ss_pred             CcccccCCCceEEeeccC
Q 009899          500 GLTNIRATPLEILLKPRL  517 (523)
Q Consensus       500 ~~~~~~~~~~~v~~~~r~  517 (523)
                      +.+. .+.++.|+++||.
T Consensus       508 ~~~~-~p~~~~v~~~~R~  524 (534)
T PLN03018        508 ASLL-MAKPLLLSVEPRL  524 (534)
T ss_pred             ccee-cCCCeEEEEEecc
Confidence            5444 4579999999994


No 16 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.5e-75  Score=531.92  Aligned_cols=459  Identities=24%  Similarity=0.336  Sum_probs=381.0

Q ss_pred             CCCCCCCCCCCcccccccccc--CCCCchHHHHHHHHhhCCeEEEE-ecCeeEEEecCHHHHHHHHHhcccccCCCC-Cc
Q 009899           34 GKKPPEAAGKWPMIGHLHLLA--GPQLPHLALGALADKYGPLFSIR-IGVHPALVVSSWEMAKELFTKHDVDISSRP-KL  109 (523)
Q Consensus        34 ~~~~~pgp~~~p~~G~~~~~~--~~~~~~~~~~~~~~kyG~v~~i~-~~~~~~v~v~dp~~~~~il~~~~~~~~~~~-~~  109 (523)
                      +...+|||+++|++|.++.+.  +..+.|+.....+++||+||+.. +|+...|+|.||++++.++++.+. +..+| ..
T Consensus        48 ~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~  126 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLI  126 (519)
T ss_pred             ChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCccccc
Confidence            345689999999999988432  23567888899999999999999 899999999999999999998875 35554 11


Q ss_pred             c---ccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHH
Q 009899          110 T---VGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKK  186 (523)
Q Consensus       110 ~---~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~  186 (523)
                      .   ...- .+++..++++.+|++|++.|..+++.++++++++.|.+.+++.+++++..+....... +  +..+.|+.+
T Consensus       127 ~~w~~~rd-~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~-~--~~~~~D~~~  202 (519)
T KOG0159|consen  127 EPWVAYRD-FRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPE-R--GELVPDFAQ  202 (519)
T ss_pred             chhhhhHH-hhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhccc-c--cccchhHHH
Confidence            1   1111 1233345677889999999999999999999999999999999999999999873221 2  333899999


Q ss_pred             HHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccccccccccc-ccccccccccHHHHHHHHHHHHHH
Q 009899          187 WFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALP-FLGWLDIGGYEKAMKKTAKELDSL  265 (523)
Q Consensus       187 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~l~~~  265 (523)
                      .+.+++++.|+.++||.++ |.+.+..++....+.+++..++.......   +.| +++++ .++.++++.++.+.+.++
T Consensus       203 ~l~~wslEsi~~V~l~~rl-G~L~~~~~~~a~~fi~ai~~~F~~s~~l~---~~p~l~r~~-~t~~wk~~~~~~D~i~~~  277 (519)
T KOG0159|consen  203 ELYRWSLESICLVLLGTRL-GLLGESPPSEAQQFIDAIKKMFESSAQLM---LMPSLWRYF-PTKVWKDFVRAWDQIFDV  277 (519)
T ss_pred             HHHHHHHHHHHHHHHhccc-ccccCCCCHHHHHHHHHHHHHHHhHHHHH---hcchHHHhC-CChHHHHHHHHHHHHHHH
Confidence            9999999999999999999 88754343435788888888887655533   334 44554 456789999999999999


Q ss_pred             HHHHHHHHHhhhcCCCC---CCccHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHH
Q 009899          266 IEEWIEEHRRKKESGAN---LDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRR  342 (523)
Q Consensus       266 ~~~~i~~~~~~~~~~~~---~~~d~~~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~  342 (523)
                      ..+.|+...++.+....   +..+++..++...+-+         .+++...+++++.||.||||.++.|+||+|++||+
T Consensus       278 ~~~~Id~~l~~l~~~~~~~~~~~~~l~~~L~~~~l~---------~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~  348 (519)
T KOG0159|consen  278 GDKYIDNALEELEKQDSAGSEYTGSLLELLLRKELS---------RKDAKANVMDLLAAGVDTTSNTLLWALYELARNPE  348 (519)
T ss_pred             HHHHHHHHHHHHHhccccccchhHHHHHHHHHccCC---------HHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChH
Confidence            99999998877554321   2223333333322111         67788999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhCC-CCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccC
Q 009899          343 ELEKVKKELDSVVGK-ERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTD  421 (523)
Q Consensus       343 ~~~~l~~Ei~~~~~~-~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d  421 (523)
                      +|++|++|+.++... ++.++.+++.++|||+||||||+||||.+|.. .|...+|.+++||.|||||.|.++.+.+.+|
T Consensus       349 ~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~-~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~  427 (519)
T KOG0159|consen  349 VQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN-GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRN  427 (519)
T ss_pred             HHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc-ccccchhceeccceecCCCeEEEeehhhccC
Confidence            999999999999987 67889999999999999999999999999986 9999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCc
Q 009899          422 PRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGL  501 (523)
Q Consensus       422 ~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~  501 (523)
                      |++|++|++|+|||||+++.   ...+++.++|||.|+|+|+||.||++|+.++++.|+++|+++..++.++  .....+
T Consensus       428 ~~~F~~p~~F~PeRWL~~~~---~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv--~~~~~~  502 (519)
T KOG0159|consen  428 PAYFPDPEEFLPERWLKPST---KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPV--EYVYRF  502 (519)
T ss_pred             hhhCCCccccChhhhccccc---CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCc--cceeEE
Confidence            99999999999999998872   2358899999999999999999999999999999999999998886433  344566


Q ss_pred             ccccCCCceEEeeccC
Q 009899          502 TNIRATPLEILLKPRL  517 (523)
Q Consensus       502 ~~~~~~~~~v~~~~r~  517 (523)
                      ++.|..++.+++++|.
T Consensus       503 il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  503 ILVPNRPLRFKFRPRN  518 (519)
T ss_pred             EEcCCCCcceeeeeCC
Confidence            7889999999999986


No 17 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=8.6e-74  Score=566.30  Aligned_cols=439  Identities=17%  Similarity=0.230  Sum_probs=335.0

Q ss_pred             CCCCCCCCCCCCCccccccccccC---CCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCC
Q 009899           32 NTGKKPPEAAGKWPMIGHLHLLAG---PQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPK  108 (523)
Q Consensus        32 ~~~~~~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~  108 (523)
                      .++.+.||||+++|++||++.+..   .+.++.++.+++++||++|++++|++++|+|+||+++++|+.+++..|+.+..
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            344578999999999999875432   13566788999999999999999999999999999999999987766654322


Q ss_pred             ccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHH-cHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHH
Q 009899          109 LTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLEL-LKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKW  187 (523)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~  187 (523)
                      ......++  ..++ +..+|+.|+++|+++. +.|+..+++. +.+.+.+.+..+++.+..         ++ .+|+.+.
T Consensus       114 ~~~~~~~g--~~~~-~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~---------~~-~vd~~~~  179 (490)
T PLN02500        114 RSIGGILG--KWSM-LVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKE---------NS-TFSAQDE  179 (490)
T ss_pred             hHHHHHhC--cccc-cccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCC---------CC-CEEehHH
Confidence            22222233  1133 4457999999999997 8899888876 455666666655554421         33 6899999


Q ss_pred             HHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHH
Q 009899          188 FGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIE  267 (523)
Q Consensus       188 ~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~  267 (523)
                      ++.+++|++++++||.+. +.   .+.   ..+...+.+.......  ....+|.       ...++..++.+.+.+++.
T Consensus       180 ~~~~~~~vi~~~~fg~~~-~~---~~~---~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~~~~~~~  243 (490)
T PLN02500        180 AKKFTFNLMAKHIMSMDP-GE---EET---EQLKKEYVTFMKGVVS--APLNFPG-------TAYRKALKSRATILKFIE  243 (490)
T ss_pred             HHHHHHHHHHHHHhCCCC-Cc---hHH---HHHHHHHHHHHhhhhc--chhcCCC-------cccHHHHHHHHHHHHHHH
Confidence            999999999999999876 32   111   2333333332221100  0111221       112445567788888899


Q ss_pred             HHHHHHHhhhcCCC--CCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHH
Q 009899          268 EWIEEHRRKKESGA--NLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRREL  344 (523)
Q Consensus       268 ~~i~~~~~~~~~~~--~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~  344 (523)
                      +.+++++++.+.+.  ....|+++.+++..          .+ ++++.+++.++++||+|||+.+++|++++|++||++|
T Consensus       244 ~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~----------~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq  313 (490)
T PLN02500        244 RKMEERIEKLKEEDESVEEDDLLGWVLKHS----------NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAV  313 (490)
T ss_pred             HHHHHHHHhhhcccCCCCcchHHHHHHhcc----------CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHH
Confidence            99888776432211  13468999998731          23 7889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhC-----CCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccc
Q 009899          345 EKVKKELDSVVG-----KERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQ  419 (523)
Q Consensus       345 ~~l~~Ei~~~~~-----~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~  419 (523)
                      +|+++|++++.+     .++.++++|+.+|||++|||+||+|++|++|.. +|.+.+|++++||.|||||+|.++.|++|
T Consensus       314 ~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~h  392 (490)
T PLN02500        314 QELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVH  392 (490)
T ss_pred             HHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcc
Confidence            999999998863     234579999999999999999999999999985 89999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCccccCCCCCCCC----CCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCccccc
Q 009899          420 TDPRVWSDPLEFKPERFLTAHKDVDV----KGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDM  495 (523)
Q Consensus       420 ~d~~~~~~p~~F~P~R~l~~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~  495 (523)
                      |||++|+||++|+||||+++++..+.    ...+..++|||+|+|.|+|++||++|+++++++|+++|+|++.++... .
T Consensus       393 rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~-~  471 (490)
T PLN02500        393 LDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA-F  471 (490)
T ss_pred             cCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc-e
Confidence            99999999999999999975421110    124578999999999999999999999999999999999998775431 1


Q ss_pred             CcCCCcccccCCCceEEeec
Q 009899          496 TGTAGLTNIRATPLEILLKP  515 (523)
Q Consensus       496 ~~~~~~~~~~~~~~~v~~~~  515 (523)
                       .. ..+ .++++++|++++
T Consensus       472 -~~-~~~-~~~~~l~~~~~~  488 (490)
T PLN02500        472 -AF-PFV-DFPKGLPIRVRR  488 (490)
T ss_pred             -ec-ccc-cCCCCceEEEEe
Confidence             12 223 345799999875


No 18 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.2e-73  Score=558.98  Aligned_cols=453  Identities=29%  Similarity=0.470  Sum_probs=357.6

Q ss_pred             CCCCCCCCCCCccccccccccCC-CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc--
Q 009899           34 GKKPPEAAGKWPMIGHLHLLAGP-QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT--  110 (523)
Q Consensus        34 ~~~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~--  110 (523)
                      +...||||.++|++|++..+... .....++.++..+||++|+.|+|+.+.++++||+.+++|+.++.....+.+.+.  
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            55689999999999999998752 356678899999999999999999999999999999999975544444443332  


Q ss_pred             ccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHH
Q 009899          111 VGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGD  190 (523)
Q Consensus       111 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~  190 (523)
                      +...+|.   |++++. |+.|+++||++. ++|+...++.+...+.+.+..++..+...   ..   ++ .+|+++.+++
T Consensus       113 ~~~~lG~---gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~---~~---~~-~vd~~~~~~~  180 (497)
T KOG0157|consen  113 LKPWLGD---GLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELA---AS---GE-EVDLQDLLKR  180 (497)
T ss_pred             HHHHhcC---ccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHh---hc---CC-eEcHHHHHHH
Confidence            3344443   444554 999999999998 89999999999999888888877777663   22   43 4999999999


Q ss_pred             HHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccccccccccc-ccccccccccHHHHHHHHHHHHHHHHHH
Q 009899          191 LNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALP-FLGWLDIGGYEKAMKKTAKELDSLIEEW  269 (523)
Q Consensus       191 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~l~~~~~~~  269 (523)
                      +++|+++.++||....+.   +... ..++..++.........   ....| +..++...+..++..++.+.+++++++.
T Consensus       181 ~tld~i~~~~~G~~~~~~---~~~~-~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~i  253 (497)
T KOG0157|consen  181 LTLDIICKTAMGPESLDA---EGPE-LFEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKILHDFLEKI  253 (497)
T ss_pred             HHHHHHHHHhcCCccccc---cCCc-ccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHH
Confidence            999999999999222111   1111 13566666644332222   23344 3333322236788899999999999999


Q ss_pred             HHHHHhhhcCCC----CCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHH
Q 009899          270 IEEHRRKKESGA----NLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRREL  344 (523)
Q Consensus       270 i~~~~~~~~~~~----~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~  344 (523)
                      |+++++....+.    ....|+++.+....+        ..+ ++++.+++.+|++||+||||++++|++++|+.||++|
T Consensus       254 I~~rr~~~~~~~~~~~~~~~d~L~~~~~~~~--------~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq  325 (497)
T KOG0157|consen  254 IRERREELEKEGSGEEKKRLDFLDTLLLEED--------KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQ  325 (497)
T ss_pred             HHHHHHHHHhcCCcccchhhhHHHHHHHhcc--------CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHH
Confidence            999997643321    134567775222111        244 7889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCC-CChhhhcCChhHHHHHHHHhcCCCCCccccceeeccccccc-ceeeCCCCEEEEcccccccCC
Q 009899          345 EKVKKELDSVVGKERL-LCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVA-EYHVPKGTRLVLNLWKLQTDP  422 (523)
Q Consensus       345 ~~l~~Ei~~~~~~~~~-~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~-g~~ip~g~~v~~~~~~~~~d~  422 (523)
                      +|+++|++++.+.+.. .+..+.++|+|+++||+|||||+||+|+. .|.+.+|++++ ||.||||+.|.++++++|||+
T Consensus       326 ~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~-~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~  404 (497)
T KOG0157|consen  326 EKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLV-ARKATKDVKLPGGYTIPKGTNVLISIYALHRDP  404 (497)
T ss_pred             HHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchh-hcccCCCeEcCCCcEeCCCCEEEEehHHhccCc
Confidence            9999999999974333 23333346999999999999999999986 99999999995 899999999999999999999


Q ss_pred             CCCC-CCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCc
Q 009899          423 RVWS-DPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGL  501 (523)
Q Consensus       423 ~~~~-~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~  501 (523)
                      ++|+ ||++||||||+++....  ..++++|+|||+|+|.|+|++||++|+|+++++|+++|++++..+..  ......+
T Consensus       405 ~~~~~dp~~F~PeRf~~~~~~~--~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~  480 (497)
T KOG0157|consen  405 RVWGEDPEEFDPERFLDGEEKA--KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPEL  480 (497)
T ss_pred             cccCCChhhcCccccCCCCCcC--CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEE
Confidence            9995 99999999999764211  33578999999999999999999999999999999999999888643  4456788


Q ss_pred             ccccCCCceEEeeccCC
Q 009899          502 TNIRATPLEILLKPRLP  518 (523)
Q Consensus       502 ~~~~~~~~~v~~~~r~~  518 (523)
                      +.+++.+++|+++||..
T Consensus       481 ~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  481 TLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             EEEecCCeEEEEEeCCC
Confidence            89999999999999963


No 19 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=6e-74  Score=570.61  Aligned_cols=456  Identities=30%  Similarity=0.493  Sum_probs=366.6

Q ss_pred             CCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcccccc--c
Q 009899           38 PEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKL--L  115 (523)
Q Consensus        38 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~--~  115 (523)
                      ||||+++|++||++.+...+++++.+.+++++||+||+++++++++++|+||+++++|+.++...++.++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            89999999999999987435678889999999999999999999999999999999999988766665543222221  0


Q ss_pred             cCCCcceeeCCCChhHHHHHHhHHHhcCCHH-HHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHHH
Q 009899          116 GHNYANFGFSPYNAYWREMRKITASELLSNR-RLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLN  194 (523)
Q Consensus       116 ~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~-~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~  194 (523)
                      ...+.+ ++..+|+.|+.+|+.+. +.|+.. .+ .+.+.+.+.++.+++.+...   ...  ++ .+|+.++++.+++|
T Consensus        81 ~~~~~~-l~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~---~~~--~~-~vd~~~~~~~~~~d  151 (463)
T PF00067_consen   81 PFGGKG-LFFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKK---AGS--SG-PVDLFDWLRRFALD  151 (463)
T ss_dssp             HHTTTS-STTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHT---TTS--ES-EEEHHHHHHHHHHH
T ss_pred             cccccc-ccccccccccccccccc-ccccccccc-cccccccccccccccccccc---ccc--cc-eeeeeccccccccc
Confidence            112223 45566899999999998 666666 66 89999999999999999886   333  33 69999999999999


Q ss_pred             HHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccc--ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009899          195 VILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGV--FLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEE  272 (523)
Q Consensus       195 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  272 (523)
                      +++.++||.++ +..   ++.....+.+.+..+......  ..+...+|++.++ +....+...++.+.+.+++.+.+++
T Consensus       152 ~i~~~~fG~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~  226 (463)
T PF00067_consen  152 VIGRVLFGKDF-GSL---DDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEE  226 (463)
T ss_dssp             HHHHHHHSSHH-HGT---THHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccee-eec---cccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccc
Confidence            99999999997 532   222123555556555443321  1223345655444 2345667777888999999999999


Q ss_pred             HHhhhcCCCCCCccHHHHHHHHh-hhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHH
Q 009899          273 HRRKKESGANLDLDFIDVLLSVL-EGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKE  350 (523)
Q Consensus       273 ~~~~~~~~~~~~~d~~~~ll~~~-~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  350 (523)
                      +++..+.......|+++.+++.. +.+    .+..+ ++++.++++.+++||+|||+.+++|++++|++||++|++|++|
T Consensus       227 ~~~~~~~~~~~~~d~l~~ll~~~~~~~----~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~E  302 (463)
T PF00067_consen  227 RREELDDGDESRRDLLDSLLQASSDSD----GPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREE  302 (463)
T ss_dssp             HHHSHHSSSSSCSSHHHHHHHHHHTTT----TTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            98876654336789999999987 332    11355 8899999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCC
Q 009899          351 LDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLE  430 (523)
Q Consensus       351 i~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~  430 (523)
                      |+++.+.++.++.+++.+||||+|||+||+|++|+++..++|.+++|++++||.||+||.|.++.+++|+||++|+||++
T Consensus       303 i~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~  382 (463)
T PF00067_consen  303 IDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDE  382 (463)
T ss_dssp             HHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999777788999999999999999999999999996679999999999999999999999999999999999999999


Q ss_pred             CCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCCce
Q 009899          431 FKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATPLE  510 (523)
Q Consensus       431 F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (523)
                      |+||||++.++  ........++|||.|+|.|+|++||++|++++++.||++|||++.++.+.........+..|++++.
T Consensus       383 F~P~R~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  460 (463)
T PF00067_consen  383 FDPERFLDERG--ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLK  460 (463)
T ss_dssp             --TTGGBTTTS--TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSE
T ss_pred             ccccccccccc--ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcE
Confidence            99999998864  1124678899999999999999999999999999999999999977654443333323455778888


Q ss_pred             EEe
Q 009899          511 ILL  513 (523)
Q Consensus       511 v~~  513 (523)
                      |.+
T Consensus       461 ~~~  463 (463)
T PF00067_consen  461 VKF  463 (463)
T ss_dssp             EEE
T ss_pred             EeC
Confidence            865


No 20 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=9.7e-73  Score=556.58  Aligned_cols=452  Identities=17%  Similarity=0.267  Sum_probs=336.9

Q ss_pred             CCCCCCCCCccccccccccCC-CCchHHHHHHHHhhCCeEE---EEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc-
Q 009899           36 KPPEAAGKWPMIGHLHLLAGP-QLPHLALGALADKYGPLFS---IRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT-  110 (523)
Q Consensus        36 ~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~kyG~v~~---i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~-  110 (523)
                      +..|||.++|++|++..+.+. ...++++.+..++||..++   .|+|+.++++|+||+++++|+.++...|.+++... 
T Consensus        31 ~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~  110 (500)
T PLN02169         31 HGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKK  110 (500)
T ss_pred             CCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHH
Confidence            368899999999999877631 1223344444445886665   67899999999999999999988766666554321 


Q ss_pred             ccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHH--cHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH
Q 009899          111 VGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLEL--LKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF  188 (523)
Q Consensus       111 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~  188 (523)
                      .....   +.+ ++..+|+.|+++||++. ++|+..++..  +.+.+.+.++.+++.+.+.   ..+  ++ .+|+.+.+
T Consensus       111 ~~~~~---g~g-l~~~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~--~~-~vd~~~~~  179 (500)
T PLN02169        111 IFDVL---GEG-ILTVDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNA---AHE--NI-IIDLQDVF  179 (500)
T ss_pred             HHHhh---cCc-ccccCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhc--CC-eEeHHHHH
Confidence            11222   223 45557999999999998 8999887754  2366667777888877654   223  55 79999999


Q ss_pred             HHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccccccccccccccc----ccccccHHHHHHHHHHHHH
Q 009899          189 GDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGW----LDIGGYEKAMKKTAKELDS  264 (523)
Q Consensus       189 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~----~~~~~~~~~~~~~~~~l~~  264 (523)
                      .++++|+|+.++||.+. +........  ..+..++........   .....|++.+    +...+..++..++.+.+.+
T Consensus       180 ~~~t~dvi~~~~fG~~~-~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (500)
T PLN02169        180 MRFMFDTSSILMTGYDP-MSLSIEMLE--VEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNR  253 (500)
T ss_pred             HHHHHHHHHhheeCCCc-cccCCCCCC--CHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHH
Confidence            99999999999999987 432111111  133333332221111   1112232111    1112345677888899999


Q ss_pred             HHHHHHHHHHhhhc-C--CCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcC
Q 009899          265 LIEEWIEEHRRKKE-S--GANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNN  340 (523)
Q Consensus       265 ~~~~~i~~~~~~~~-~--~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~  340 (523)
                      ++.+.|+++++... .  .+....|+++.+++....+. + .+..+ ++++.+++.++++||+|||+++++|++++|++|
T Consensus       254 ~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~-~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~  331 (500)
T PLN02169        254 MFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSKY-K-LLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKH  331 (500)
T ss_pred             HHHHHHHHHHHHhhccccccCCCcCHHHHHHhcccccc-c-cccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCC
Confidence            99999998876421 1  11124689999997642210 0 01134 778999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeeccccc-ccceeeCCCCEEEEcccccc
Q 009899          341 RRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCT-VAEYHVPKGTRLVLNLWKLQ  419 (523)
Q Consensus       341 p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~-i~g~~ip~g~~v~~~~~~~~  419 (523)
                      |++|+|+++||++++      +++++.+||||+|||+||||++|++|.. .|.+.+|.+ ++||.||||+.|.+++|++|
T Consensus       332 Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~-~r~~~~d~~~~~G~~IpkGt~v~i~~~~ih  404 (500)
T PLN02169        332 PQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFN-HKAPAKPDVLPSGHKVDAESKIVICIYALG  404 (500)
T ss_pred             HHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcC-ceecCCCCCccCCEEECCCCEEEEcHHHhh
Confidence            999999999999864      5789999999999999999999999987 677766655 59999999999999999999


Q ss_pred             cCCCCC-CCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcC
Q 009899          420 TDPRVW-SDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGT  498 (523)
Q Consensus       420 ~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~  498 (523)
                      |||++| +||++|+||||+++++.. ....+..|+|||+|+|.|+|++||++|+++++++|+++|+++++++..+  ...
T Consensus       405 rd~~~w~~dP~~F~PeRfl~~~~~~-~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~--~~~  481 (500)
T PLN02169        405 RMRSVWGEDALDFKPERWISDNGGL-RHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKI--EAI  481 (500)
T ss_pred             CCccccCCChhhcCccccCCCCCCc-cCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCc--ccc
Confidence            999999 899999999999754321 1123678999999999999999999999999999999999998765433  334


Q ss_pred             CCcccccCCCceEEeecc
Q 009899          499 AGLTNIRATPLEILLKPR  516 (523)
Q Consensus       499 ~~~~~~~~~~~~v~~~~r  516 (523)
                      .+++..|+++++|++++|
T Consensus       482 ~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        482 PSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             cceEEecCCCEEEEEEeC
Confidence            567888999999999987


No 21 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=5.6e-72  Score=548.81  Aligned_cols=428  Identities=20%  Similarity=0.277  Sum_probs=335.2

Q ss_pred             CCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcccccc
Q 009899           35 KKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKL  114 (523)
Q Consensus        35 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~  114 (523)
                      .+.||||+++|++||++.+.  +++..++.+++++||++|++++|++++++|+||+++++|+.++...|..+........
T Consensus        30 ~~~ppgp~~~P~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~  107 (463)
T PLN02774         30 KGLPPGTMGWPLFGETTEFL--KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDI  107 (463)
T ss_pred             CCCCCCCCCCCchhhHHHHH--HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHH
Confidence            35788999999999998876  5567899999999999999999999999999999999999877665533322222233


Q ss_pred             ccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHH-cHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHH
Q 009899          115 LGHNYANFGFSPYNAYWREMRKITASELLSNRRLEL-LKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNL  193 (523)
Q Consensus       115 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~  193 (523)
                      ++.   +.+++.+|+.|+++|+++. ++|++..++. +.+.+.+.++++++.+..         ++ ++|+.+.+..+++
T Consensus       108 lg~---~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~v~~~~~~~~~~~  173 (463)
T PLN02774        108 LGT---CNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDG---------LK-TIDIQEKTKEMAL  173 (463)
T ss_pred             hCc---cchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCC---------CC-CEEeeHHHHHHHH
Confidence            332   2234557999999999997 7899988875 677777777777665522         33 6899999999999


Q ss_pred             HHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009899          194 NVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEH  273 (523)
Q Consensus       194 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  273 (523)
                      ++++.++||.+. +.     ..  .++...+..+..  ...    .+|.  +++. ...++..++.+.+.+++.+.++++
T Consensus       174 ~~~~~~~~g~~~-~~-----~~--~~~~~~~~~~~~--~~~----~~~~--~lp~-~~~~~~~~~~~~~~~~~~~~i~~r  236 (463)
T PLN02774        174 LSALKQIAGTLS-KP-----IS--EEFKTEFFKLVL--GTL----SLPI--DLPG-TNYRSGVQARKNIVRMLRQLIQER  236 (463)
T ss_pred             HHHHHHHcCCCC-hH-----HH--HHHHHHHHHHhc--ccc----cCCc--CCCC-hhhhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999765 21     11  223333322211  110    1121  1111 123455667888899999999887


Q ss_pred             HhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 009899          274 RRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELD  352 (523)
Q Consensus       274 ~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  352 (523)
                      ++..  .  ..+|+++.|++...+      +..+ ++++.+++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus       237 ~~~~--~--~~~d~l~~ll~~~~~------~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~  306 (463)
T PLN02774        237 RASG--E--THTDMLGYLMRKEGN------RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHL  306 (463)
T ss_pred             HhcC--C--CcccHHHHHHhCccC------CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            6542  1  446999999873221      2235 889999999999999999999999999999999999999999999


Q ss_pred             HhhCC---CCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCC
Q 009899          353 SVVGK---ERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL  429 (523)
Q Consensus       353 ~~~~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~  429 (523)
                      ++.+.   ++.++++++.+|||++|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++.+++|+||++|+||+
T Consensus       307 ~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~  385 (463)
T PLN02774        307 AIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPM  385 (463)
T ss_pred             HHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChh
Confidence            98753   35688999999999999999999999999865 899999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCCc
Q 009899          430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATPL  509 (523)
Q Consensus       430 ~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (523)
                      +|+||||++++..     ....++|||+|+|.|+|++||++|++++++.|+++|++++.++.++  ...+  +..|++++
T Consensus       386 ~F~PeRfl~~~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~--~~~~--~~~p~~g~  456 (463)
T PLN02774        386 TFNPWRWLDKSLE-----SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKL--MKFP--RVEAPNGL  456 (463)
T ss_pred             ccCchhcCCCCcC-----CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcc--ccCC--CCCCCCCc
Confidence            9999999965311     1235999999999999999999999999999999999999776432  1222  33478999


Q ss_pred             eEEeec
Q 009899          510 EILLKP  515 (523)
Q Consensus       510 ~v~~~~  515 (523)
                      +|+++|
T Consensus       457 ~~~~~~  462 (463)
T PLN02774        457 HIRVSP  462 (463)
T ss_pred             eEEeee
Confidence            999984


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=6.7e-72  Score=556.42  Aligned_cols=452  Identities=19%  Similarity=0.254  Sum_probs=337.8

Q ss_pred             CCCCCCCCccccccccccCCCCchHHHHHHHHhh---CCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc-cc
Q 009899           37 PPEAAGKWPMIGHLHLLAGPQLPHLALGALADKY---GPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT-VG  112 (523)
Q Consensus        37 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~ky---G~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~-~~  112 (523)
                      .+|||+++|++||++.+.  .. +..+.+|.++|   |++|++++|+.+.++++||+.+++|+.++...|.+.+... ..
T Consensus        31 ~~pgp~~~p~~G~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  107 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQL--KN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYM  107 (516)
T ss_pred             ccCCCCCCCeecchHHHH--hc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHH
Confidence            479999999999987654  22 34566777777   8999999999999999999999999987644454443221 11


Q ss_pred             ccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHH-HHHHHHHHHHHHHHhhhcccccccccchHHHHHHHH
Q 009899          113 KLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIR-ATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDL  191 (523)
Q Consensus       113 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~  191 (523)
                      ....  +.+ +++.+|+.|+++|+++. +.|+.++++.+.+.+ .+.++.+++.+.+.   ...  ++ ++|+.+++..+
T Consensus       108 ~~~~--g~~-l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~---~~~--~~-~vd~~~~~~~~  177 (516)
T PLN03195        108 EVLL--GDG-IFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQA---SFA--NQ-VVDMQDLFMRM  177 (516)
T ss_pred             HHHh--cCe-eeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhc--CC-eEcHHHHHHHH
Confidence            1111  223 45568999999999997 889999999998875 66677777766553   222  45 79999999999


Q ss_pred             HHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccc--cccccccccHHHHHHHHHHHHHHHHHH
Q 009899          192 NLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPF--LGWLDIGGYEKAMKKTAKELDSLIEEW  269 (523)
Q Consensus       192 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~l~~~~~~~  269 (523)
                      ++|+++.++||.++ +........  ..+.+.++........   ....|+  +.........+...+..+.+.+++.+.
T Consensus       178 ~~dvi~~~~fG~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (516)
T PLN03195        178 TLDSICKVGFGVEI-GTLSPSLPE--NPFAQAFDTANIIVTL---RFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSV  251 (516)
T ss_pred             HHHHHHHHHhCCCc-cccccCCCc--cHHHHHHHHHHHHHHH---HHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence            99999999999988 542111111  1333333332211100   001121  111101112344456677788888888


Q ss_pred             HHHHHhhhcC----CCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHH
Q 009899          270 IEEHRRKKES----GANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRREL  344 (523)
Q Consensus       270 i~~~~~~~~~----~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~  344 (523)
                      +++++++...    .+....|+++.|++...++     +..+ ++++.++++++++||+|||+.+++|++++|++||++|
T Consensus       252 i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-----~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq  326 (516)
T PLN03195        252 IRRRKAEMDEARKSGKKVKHDILSRFIELGEDP-----DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVA  326 (516)
T ss_pred             HHHHHHHHhccccccccccccHHHHHHhccCCC-----CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHH
Confidence            8887654321    1113568999999754321     2245 8889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCC--------------------CCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccc-cce
Q 009899          345 EKVKKELDSVVGK--------------------ERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTV-AEY  403 (523)
Q Consensus       345 ~~l~~Ei~~~~~~--------------------~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i-~g~  403 (523)
                      +||++|++++.+.                    ++.++++++.+||||+|||+||||++|++|.. +|.+.+|.++ +||
T Consensus       327 ~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~  405 (516)
T PLN03195        327 EKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGT  405 (516)
T ss_pred             HHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCc
Confidence            9999999987642                    24578999999999999999999999999987 6767776555 999


Q ss_pred             eeCCCCEEEEcccccccCCCCC-CCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhh
Q 009899          404 HVPKGTRLVLNLWKLQTDPRVW-SDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHA  482 (523)
Q Consensus       404 ~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~  482 (523)
                      .|||||.|.++++++||||++| +||++|+||||+++..  .....+..|+|||+|+|.|+|++||++|++++++.|+++
T Consensus       406 ~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~--~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~  483 (516)
T PLN03195        406 KVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGV--FQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRF  483 (516)
T ss_pred             EECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCC--cCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999 9999999999996431  011245679999999999999999999999999999999


Q ss_pred             cceecCCCcccccCcCCCcccccCCCceEEeeccC
Q 009899          483 FDISTPGEAWVDMTGTAGLTNIRATPLEILLKPRL  517 (523)
Q Consensus       483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  517 (523)
                      |++++.++.+.  ......+..|+.++.|++++|.
T Consensus       484 f~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        484 FKFQLVPGHPV--KYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             ceeEecCCCcc--eeeeeeEEecCCCEEEEEEeCC
Confidence            99998765432  2233456678899999999984


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1e-71  Score=556.38  Aligned_cols=444  Identities=23%  Similarity=0.363  Sum_probs=337.6

Q ss_pred             cccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccccccCCCcceeeCCC
Q 009899           48 GHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPY  127 (523)
Q Consensus        48 G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (523)
                      ||+..+.+ +..+..+.++|++|||||++++|+.++++|+||+.+++||.++...|.+++.........  +.+ ++..+
T Consensus       143 G~l~~i~~-g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~--g~~-l~~~d  218 (633)
T PLN02738        143 GSISAVRG-EAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVM--GKG-LIPAD  218 (633)
T ss_pred             CcHHHhcC-chHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhcc--CCc-eecCC
Confidence            44444544 567889999999999999999999999999999999999997766666553322111111  223 34567


Q ss_pred             ChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHHHHHHHHHhcccccC
Q 009899          128 NAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFG  207 (523)
Q Consensus       128 g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~  207 (523)
                      |+.|+++|+.+. ++|+.++++.+++.+.+.++.+++.+.+.   ...  ++ ++|+...+..+++|+|+.++||.++ +
T Consensus       219 ge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~---~~~--g~-~vdl~~~~~~lt~DVI~~~~FG~~~-~  290 (633)
T PLN02738        219 GEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAA---ASD--GE-DVEMESLFSRLTLDIIGKAVFNYDF-D  290 (633)
T ss_pred             cHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHH---hcC--CC-cEeHHHHHHHHHHHHHHHHHhCCCc-c
Confidence            999999999998 89999999999999999999999999775   333  55 8999999999999999999999998 5


Q ss_pred             cccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcC--------
Q 009899          208 ARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKES--------  279 (523)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~--------  279 (523)
                      ...+ ++.....+...+...............+|++..+  ....++..+..+.+.+++.++++.+++..+.        
T Consensus       291 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~  367 (633)
T PLN02738        291 SLSN-DTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEE  367 (633)
T ss_pred             cccc-chHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhc
Confidence            4211 1121223333333221100000000112222222  1112444455555666666666544321110        


Q ss_pred             -CCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCC
Q 009899          280 -GANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGK  357 (523)
Q Consensus       280 -~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  357 (523)
                       ......|+++.|++..         ..+ ++++.++++.+++||+|||+.+|+|++++|++||++|+|||+|++++++ 
T Consensus       368 ~~~~~~~dil~~Ll~~~---------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-  437 (633)
T PLN02738        368 YMNERDPSILHFLLASG---------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-  437 (633)
T ss_pred             ccccccchHHHHHHHcC---------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-
Confidence             0113458999888642         124 7889999999999999999999999999999999999999999999988 


Q ss_pred             CCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCcccc
Q 009899          358 ERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFL  437 (523)
Q Consensus       358 ~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l  437 (523)
                      ++.++++++++||||+|||+|+|||+|++|.. +|.+.+|.+++||.||+||.|.++.+.+||||++|+||++|+||||+
T Consensus       438 ~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl  516 (633)
T PLN02738        438 DRFPTIEDMKKLKYTTRVINESLRLYPQPPVL-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWP  516 (633)
T ss_pred             CCCCCHHHHccCHHHHHHHHHHHhcCCCcccc-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCC
Confidence            46789999999999999999999999999985 79999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCCceEEeeccC
Q 009899          438 TAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATPLEILLKPRL  517 (523)
Q Consensus       438 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  517 (523)
                      ......+....+..++|||.|+|.|+|++||++|++++++.|+++|+|++.++.+ +.....+.+..++++++|++++|+
T Consensus       517 ~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~  595 (633)
T PLN02738        517 LDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRT  595 (633)
T ss_pred             CCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECC
Confidence            5421111223567899999999999999999999999999999999999877642 233334567778899999999995


Q ss_pred             C
Q 009899          518 P  518 (523)
Q Consensus       518 ~  518 (523)
                      .
T Consensus       596 ~  596 (633)
T PLN02738        596 K  596 (633)
T ss_pred             C
Confidence            4


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=5.1e-71  Score=541.47  Aligned_cols=431  Identities=22%  Similarity=0.296  Sum_probs=341.3

Q ss_pred             HhhcCCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCC
Q 009899           28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRP  107 (523)
Q Consensus        28 ~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~  107 (523)
                      .+....+.+.||||+++|++|+++.+.. ++++.++.+++++||++|+++++++++|+|+||+++++|+.++...|.  +
T Consensus        27 ~~~~~~~~~~Ppgp~~~P~iG~~~~~~~-~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~  103 (463)
T PLN02196         27 RRSSSTKLPLPPGTMGWPYVGETFQLYS-QDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--P  103 (463)
T ss_pred             ccCCCCCCCCCCCCCCCCccchHHHHHh-cCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--c
Confidence            4444556678899989999999887643 678899999999999999999999999999999999999988766553  2


Q ss_pred             CccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHH
Q 009899          108 KLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKW  187 (523)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~  187 (523)
                      ..........+. ..++..+|+.|+++|+++. +.|+.++++.+.+.+.+.++++++.+.          ++ .+|+.++
T Consensus       104 ~~~~~~~~~~g~-~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~----------~~-~v~~~~~  170 (463)
T PLN02196        104 TFPASKERMLGK-QAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE----------GT-QINTYQE  170 (463)
T ss_pred             cCchHHHHHcCc-ccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC----------CC-eEEeHHH
Confidence            221111111122 2345567999999999998 789999999999999999888877652          33 6899999


Q ss_pred             HHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHH
Q 009899          188 FGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIE  267 (523)
Q Consensus       188 ~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~  267 (523)
                      ++.+++++++.++||.+. ..    ..+   .+...+......      ...+|+.  + +....++..++.+.+.+++.
T Consensus       171 ~~~~~~~v~~~~~fG~~~-~~----~~~---~~~~~~~~~~~~------~~~~~~~--~-p~~~~~~~~~a~~~~~~~~~  233 (463)
T PLN02196        171 MKTYTFNVALLSIFGKDE-VL----YRE---DLKRCYYILEKG------YNSMPIN--L-PGTLFHKSMKARKELAQILA  233 (463)
T ss_pred             HHHHHHHHHHHHHcCCCC-ch----HHH---HHHHHHHHHhcc------hhccccc--C-CCccchHHHHHHHHHHHHHH
Confidence            999999999999999876 11    111   222222211110      0112321  1 11123456677888889999


Q ss_pred             HHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHH
Q 009899          268 EWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEK  346 (523)
Q Consensus       268 ~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~  346 (523)
                      +.++++++...    ...|+++.+++..         ..+ ++++.++++++++||+|||+.+++|++++|++||++|+|
T Consensus       234 ~~i~~~~~~~~----~~~d~l~~ll~~~---------~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~k  300 (463)
T PLN02196        234 KILSKRRQNGS----SHNDLLGSFMGDK---------EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEA  300 (463)
T ss_pred             HHHHHHhhcCC----CcccHHHHHHhcC---------CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHH
Confidence            98887765321    3468999888521         134 788999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhCC---CCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCC
Q 009899          347 VKKELDSVVGK---ERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPR  423 (523)
Q Consensus       347 l~~Ei~~~~~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~  423 (523)
                      +++|++++.+.   ++.++++++++|||++|||+||+|++|++++. .|.+.+|++++||.||||+.|.++.+++|+||+
T Consensus       301 l~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~  379 (463)
T PLN02196        301 VTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSAD  379 (463)
T ss_pred             HHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCch
Confidence            99999988753   45688999999999999999999999999986 799999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCccc
Q 009899          424 VWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTN  503 (523)
Q Consensus       424 ~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~  503 (523)
                      +|+||++|+||||+...       .+..++|||+|+|.|+|+++|++|++++++.|+++|++++++++ .++  ..+.+.
T Consensus       380 ~~~dP~~F~PeRfl~~~-------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~--~~~~~~  449 (463)
T PLN02196        380 IFSDPGKFDPSRFEVAP-------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NGI--QYGPFA  449 (463)
T ss_pred             hcCCcCccChhhhcCCC-------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-Cce--EEcccc
Confidence            99999999999998532       35679999999999999999999999999999999999987653 222  234455


Q ss_pred             ccCCCceEEeec
Q 009899          504 IRATPLEILLKP  515 (523)
Q Consensus       504 ~~~~~~~v~~~~  515 (523)
                      .|++++.|+++.
T Consensus       450 ~p~~~~~~~~~~  461 (463)
T PLN02196        450 LPQNGLPIALSR  461 (463)
T ss_pred             cCCCCceEEEec
Confidence            688999999873


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=2e-70  Score=536.70  Aligned_cols=436  Identities=20%  Similarity=0.266  Sum_probs=339.0

Q ss_pred             CCCCCCCCCCCCCccccccccccC---CCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCC
Q 009899           32 NTGKKPPEAAGKWPMIGHLHLLAG---PQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPK  108 (523)
Q Consensus        32 ~~~~~~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~  108 (523)
                      .++.+.||||.++|++||++.+..   ...++.++.+++++||+||++++|++++|+++||+++++++.+++..|+.+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            346678999999999999988742   14578899999999999999999999999999999999999988777765432


Q ss_pred             ccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHc-HHHHHHHHHHHHHHHHHHhhhcccccccccchHHHH
Q 009899          109 LTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELL-KHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKW  187 (523)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~  187 (523)
                      .....+++.   +.++..+|+.|+++|+++. +.|+..++..+ .+.+.+.++++++.+.       .  ++ .+|+.+.
T Consensus        83 ~~~~~l~g~---~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------~--~~-~~~~~~~  148 (452)
T PLN03141         83 KSLTELMGK---SSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR-------D--DP-PVLVQDE  148 (452)
T ss_pred             hhHHHHhCc---ccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc-------C--CC-CEEhHHH
Confidence            222233332   2345557999999999997 67877666542 4455555544444331       1  44 7899999


Q ss_pred             HHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHH
Q 009899          188 FGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIE  267 (523)
Q Consensus       188 ~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~  267 (523)
                      +..+++++++.++||.+. +.     +  ...+...+..+.....      .+|+.  ++.. ...+..++.+.+.+++.
T Consensus       149 ~~~~~~~vi~~~~~G~~~-~~-----~--~~~~~~~~~~~~~~~~------~~~~~--~p~~-~~~~~~~~~~~l~~~~~  211 (452)
T PLN03141        149 TKKIAFEVLVKALISLEP-GE-----E--MEFLKKEFQEFIKGLM------SLPIK--LPGT-RLYRSLQAKKRMVKLVK  211 (452)
T ss_pred             HHHHHHHHHHHHHcCCCc-hH-----H--HHHHHHHHHHHhhhHH------hCccC--CCch-HhHHHHHHHHHHHHHHH
Confidence            999999999999999765 21     1  1233334433322111      12211  1111 12344567888999999


Q ss_pred             HHHHHHHhhhcCCC----CCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHH
Q 009899          268 EWIEEHRRKKESGA----NLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRR  342 (523)
Q Consensus       268 ~~i~~~~~~~~~~~----~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~  342 (523)
                      +.|+++++..+.+.    ....|+++.+++...        ..+ ++++..+++++++||+|||+.+++|++++|++||+
T Consensus       212 ~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~--------~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~  283 (452)
T PLN03141        212 KIIEEKRRAMKNKEEDETGIPKDVVDVLLRDGS--------DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPV  283 (452)
T ss_pred             HHHHHHHHHHhccCccccCChhhHHHHHHhcCC--------CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChH
Confidence            99988876543211    024689999887431        134 78899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhC----CCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEccccc
Q 009899          343 ELEKVKKELDSVVG----KERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKL  418 (523)
Q Consensus       343 ~~~~l~~Ei~~~~~----~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~  418 (523)
                      +|+++++|++++.+    .+..++.+++.+|||++|||+|++|++|+++. ++|.+.+|++++||.||+|+.|+++.+++
T Consensus       284 v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~  362 (452)
T PLN03141        284 ALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSV  362 (452)
T ss_pred             HHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhc
Confidence            99999999988753    24457899999999999999999999999985 49999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcC
Q 009899          419 QTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGT  498 (523)
Q Consensus       419 ~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~  498 (523)
                      |+||++|+||++|+||||++++      ..+..++|||+|+|.|+|++||.+|+++++|.|+++|+++++++...   . 
T Consensus       363 ~~d~~~~~dP~~F~PeRfl~~~------~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~---~-  432 (452)
T PLN03141        363 HLDEENYDNPYQFNPWRWQEKD------MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV---N-  432 (452)
T ss_pred             cCCchhcCCccccCcccccCCC------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee---e-
Confidence            9999999999999999999753      13568999999999999999999999999999999999998765321   1 


Q ss_pred             CCcccccCCCceEEeeccCC
Q 009899          499 AGLTNIRATPLEILLKPRLP  518 (523)
Q Consensus       499 ~~~~~~~~~~~~v~~~~r~~  518 (523)
                       ..+..|+.++.|.+++|.-
T Consensus       433 -~~~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        433 -FPTVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             -cccccCCCCceEEEEeCCC
Confidence             2367888999999999964


No 26 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.7e-69  Score=528.32  Aligned_cols=447  Identities=18%  Similarity=0.239  Sum_probs=342.0

Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCCccccccccccC---CCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHh
Q 009899           22 VVFYYLQKWSNTGKKPPEAAGKWPMIGHLHLLAG---PQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTK   98 (523)
Q Consensus        22 ~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~   98 (523)
                      +..+++.+....+.+.||||.++|++||++.+..   ..+++.++.+++++||++|+++++++++++|+||+++++++.+
T Consensus        16 ~~~~~~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~   95 (472)
T PLN02987         16 IFFLLLRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQN   95 (472)
T ss_pred             HHHHHHHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhC
Confidence            3334444444555678999999999999987631   1457788999999999999999999999999999999999998


Q ss_pred             cccccCCCCCccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccc
Q 009899           99 HDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESD  178 (523)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  178 (523)
                      +...|.+++.......++  ..++.+ .+|+.|+++|+++. ++++.+.+..+.   ...+.+++....+.|       +
T Consensus        96 ~~~~f~~~~~~~~~~~lg--~~~l~~-~~g~~wr~~R~~~~-~f~~~~~~~~~~---~~~~~~~~~~~~~~~-------~  161 (472)
T PLN02987         96 EGKLFECSYPGSISNLLG--KHSLLL-MKGNLHKKMHSLTM-SFANSSIIKDHL---LLDIDRLIRFNLDSW-------S  161 (472)
T ss_pred             CCceEEecCcHHHHHHhC--cccccc-cCcHHHHHHHHHHH-HhcChHHHHHHH---HHHHHHHHHHHHHhh-------c
Confidence            877775543322333343  223444 47999999999976 555555544432   223344443333321       2


Q ss_pred             cccchHHHHHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHH
Q 009899          179 QILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKT  258 (523)
Q Consensus       179 ~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~  258 (523)
                      + ++++.+.++.++++++++++||.+. +.     ..  ..+...+.......    ....+|++.     ...++..++
T Consensus       162 ~-~v~~~~~~~~~t~~vi~~~~fg~~~-~~-----~~--~~~~~~~~~~~~~~----~~~~~p~l~-----~~~~~~~~~  223 (472)
T PLN02987        162 S-RVLLMEEAKKITFELTVKQLMSFDP-GE-----WT--ESLRKEYVLVIEGF----FSVPLPLFS-----TTYRRAIQA  223 (472)
T ss_pred             c-ceehHHHHHHHHHHHHHHHHcCCCC-hH-----HH--HHHHHHHHHHHhhh----hcCCCcCCC-----chHHHHHHH
Confidence            2 6899999999999999999999866 21     11  12222222221111    112234431     235667778


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHH
Q 009899          259 AKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLL  337 (523)
Q Consensus       259 ~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L  337 (523)
                      .+.+.+++.+.++++++....+.....|+++.|++...         .+ ++++.++++++++||+|||+.+++|++++|
T Consensus       224 ~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~---------~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L  294 (472)
T PLN02987        224 RTKVAEALTLVVMKRRKEEEEGAEKKKDMLAALLASDD---------GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFL  294 (472)
T ss_pred             HHHHHHHHHHHHHHHHhhhhccCcccccHHHHHHhcCC---------CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence            89999999999999876543322245699999996521         34 788999999999999999999999999999


Q ss_pred             hcCHHHHHHHHHHHHHhhC---CCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEc
Q 009899          338 LNNRRELEKVKKELDSVVG---KERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLN  414 (523)
Q Consensus       338 ~~~p~~~~~l~~Ei~~~~~---~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~  414 (523)
                      ++||++|+++++|++++.+   .++.++++++.+|||++||++||+|++|+++.. +|.+.+|++++||.||+|+.|.++
T Consensus       295 ~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~ip~Gt~v~~~  373 (472)
T PLN02987        295 TETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKGYTIPKGWKVFAS  373 (472)
T ss_pred             HhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECCEEECCCCEEEEe
Confidence            9999999999999998874   234578899999999999999999999999854 899999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccc
Q 009899          415 LWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVD  494 (523)
Q Consensus       415 ~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~  494 (523)
                      .+.+|+||++|+||++|+||||++.+..   ...+..++|||+|+|.|+|++||++|++++++.|+++|++++.++..+.
T Consensus       374 ~~~~~~d~~~~~~p~~F~PeRfl~~~~~---~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~  450 (472)
T PLN02987        374 FRAVHLDHEYFKDARTFNPWRWQSNSGT---TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLV  450 (472)
T ss_pred             hHHhhCCcccCCCccccCcccCCCCCCC---CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCcee
Confidence            9999999999999999999999975421   1234679999999999999999999999999999999999987765322


Q ss_pred             cCcCCCcccccCCCceEEeeccC
Q 009899          495 MTGTAGLTNIRATPLEILLKPRL  517 (523)
Q Consensus       495 ~~~~~~~~~~~~~~~~v~~~~r~  517 (523)
                      .    ..+..|.+++.+++++|.
T Consensus       451 ~----~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        451 F----FPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             e----cccccCCCCceEEEEecc
Confidence            2    337788899999999985


No 27 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=3.7e-69  Score=536.08  Aligned_cols=439  Identities=20%  Similarity=0.279  Sum_probs=341.8

Q ss_pred             CCCCCCCCCCCCccccccccccC---CCCchHHHHHHHHhhCC--eEEEEecCeeEEEecCHHHHHHHHHhcccccCCCC
Q 009899           33 TGKKPPEAAGKWPMIGHLHLLAG---PQLPHLALGALADKYGP--LFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRP  107 (523)
Q Consensus        33 ~~~~~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~--v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~  107 (523)
                      ...+.||||+++|++|+++.+..   ..+++.++.+++++||+  +|++++++.+.++++||+++++|+.+++ .|.++.
T Consensus        39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~~~  117 (490)
T PLN02302         39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEPGW  117 (490)
T ss_pred             CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccccCC
Confidence            34568999999999999887642   24678899999999997  7999999999999999999999998763 444332


Q ss_pred             CccccccccCCCcceeeCCCChhHHHHHHhHHHhcC-CHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHH
Q 009899          108 KLTVGKLLGHNYANFGFSPYNAYWREMRKITASELL-SNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKK  186 (523)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f-s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~  186 (523)
                      ........+.   ......+|+.|+++|+.+. +.| +.++++.+.+.+.+.++++++.+..      .  +  .+|+.+
T Consensus       118 ~~~~~~~~g~---~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~------~--~--~v~~~~  183 (490)
T PLN02302        118 PESTVELIGR---KSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK------M--G--EIEFLT  183 (490)
T ss_pred             chhHHHHhcc---ccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC------C--C--CEehHH
Confidence            2211122221   2234457999999999998 566 6788999999999999988887743      1  3  589999


Q ss_pred             HHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHH
Q 009899          187 WFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLI  266 (523)
Q Consensus       187 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~  266 (523)
                      ++..+++++++.++||.+. +.     ..  ..+...+.........  ....+|.       ...++..++.+.+.+++
T Consensus       184 ~~~~~~~~vi~~~~~G~~~-~~-----~~--~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~l~~~~  246 (490)
T PLN02302        184 ELRKLTFKIIMYIFLSSES-EL-----VM--EALEREYTTLNYGVRA--MAINLPG-------FAYHRALKARKKLVALF  246 (490)
T ss_pred             HHHHHHHHHHHHHHcCCCC-hH-----HH--HHHHHHHHHHHHHhhh--CCcCCCc-------hhhHHHHHHHHHHHHHH
Confidence            9999999999999999876 22     11  2222222221111000  0011121       11234445667788888


Q ss_pred             HHHHHHHHhhhcCC-CCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHH
Q 009899          267 EEWIEEHRRKKESG-ANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRREL  344 (523)
Q Consensus       267 ~~~i~~~~~~~~~~-~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~  344 (523)
                      .+.++++++....+ .....|+++.|++..+++     +..+ ++++.++++.+++||+|||+.+++|++++|++||++|
T Consensus       247 ~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-----~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~  321 (490)
T PLN02302        247 QSIVDERRNSRKQNISPRKKDMLDLLLDAEDEN-----GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVL  321 (490)
T ss_pred             HHHHHHHHHhhhccCCCCcCCHHHHHHhhhccC-----CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHH
Confidence            88888887553321 124579999999865433     2235 7889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCCC----CCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEccccccc
Q 009899          345 EKVKKELDSVVGKE----RLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQT  420 (523)
Q Consensus       345 ~~l~~Ei~~~~~~~----~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~  420 (523)
                      +|+++|++++++..    ..++++++++||||+|||+|++|++|++|.. +|.+.+|++++||.||+|+.|.++.+++||
T Consensus       322 ~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~r  400 (490)
T PLN02302        322 QKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHM  400 (490)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcC
Confidence            99999999987632    1378999999999999999999999999985 899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCC
Q 009899          421 DPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAG  500 (523)
Q Consensus       421 d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~  500 (523)
                      ||++|+||++|+||||++..      ..+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++. .+..  ..
T Consensus       401 d~~~~~dP~~F~PeR~~~~~------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~  471 (490)
T PLN02302        401 DPEVYPNPKEFDPSRWDNYT------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKVM--YL  471 (490)
T ss_pred             CcccCCCccccChhhcCCCC------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-Ccce--eC
Confidence            99999999999999999643      245679999999999999999999999999999999999987642 2222  22


Q ss_pred             cccccCCCceEEeeccCC
Q 009899          501 LTNIRATPLEILLKPRLP  518 (523)
Q Consensus       501 ~~~~~~~~~~v~~~~r~~  518 (523)
                      .+..|..++.+++++|++
T Consensus       472 ~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        472 PHPRPKDNCLARITKVAS  489 (490)
T ss_pred             CCCCCCCCceEEEEeccC
Confidence            236688999999999875


No 28 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=2.1e-69  Score=533.15  Aligned_cols=453  Identities=23%  Similarity=0.340  Sum_probs=349.1

Q ss_pred             CCCCCCCCCCccccccccccC---CCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 009899           35 KKPPEAAGKWPMIGHLHLLAG---PQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTV  111 (523)
Q Consensus        35 ~~~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~  111 (523)
                      .+.-.|-.|||++|..+.+..   .+..+..+.+++++||++|++++|+.++++++||+++++|+++.+..|.+++....
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~   90 (489)
T PLN02936         11 NRLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEV   90 (489)
T ss_pred             hccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhh
Confidence            346678889999999776532   36678999999999999999999999999999999999999876666765543222


Q ss_pred             cccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHH-HHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHH
Q 009899          112 GKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKH-IRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGD  190 (523)
Q Consensus       112 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~  190 (523)
                      .....  +.+ ++..+|+.|+++|+++. +.|+..++..+.+ .+.+.++.+++.+.+.   ...  ++ ++|+.++++.
T Consensus        91 ~~~~~--~~~-i~~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~---~~~--g~-~vd~~~~~~~  160 (489)
T PLN02936         91 SEFLF--GSG-FAIAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPV---ALS--GE-AVNMEAKFSQ  160 (489)
T ss_pred             hHHHh--cCc-cccCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHH---hcC--CC-ceeHHHHHHH
Confidence            11111  123 34467999999999998 8899888887654 7788899999998775   333  55 8999999999


Q ss_pred             HHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccccccccccccc-----ccccccccHHHHHHHHHHHHHH
Q 009899          191 LNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFL-----GWLDIGGYEKAMKKTAKELDSL  265 (523)
Q Consensus       191 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-----~~~~~~~~~~~~~~~~~~l~~~  265 (523)
                      +++|+++.++||.++ +.... +.    .+.+.+...+..... .....+|++     .++  ....++..++.+.+.++
T Consensus       161 ~~~dvi~~~~fG~~~-~~~~~-~~----~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~--~p~~~~~~~~~~~i~~~  231 (489)
T PLN02936        161 LTLDVIGLSVFNYNF-DSLTT-DS----PVIQAVYTALKEAET-RSTDLLPYWKVDFLCKI--SPRQIKAEKAVTVIRET  231 (489)
T ss_pred             HHHHHHHHHHcCCCc-ccccc-Cc----HHHHHHHHHHHHHHH-hhhccchHHhhHHHhcc--ChhhHHHHHHHHHHHHH
Confidence            999999999999998 54211 11    222222222211111 111123322     111  11244566777888888


Q ss_pred             HHHHHHHHHhhhcCC----------CCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHH
Q 009899          266 IEEWIEEHRRKKESG----------ANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWAL  334 (523)
Q Consensus       266 ~~~~i~~~~~~~~~~----------~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l  334 (523)
                      +.+.++++++..+..          .....|+++.|++..+         .+ ++++.++++++++||+|||+.+++|++
T Consensus       232 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~---------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l  302 (489)
T PLN02936        232 VEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE---------EVSSVQLRDDLLSMLVAGHETTGSVLTWTL  302 (489)
T ss_pred             HHHHHHHHHHHHhhcccccccccccccCchHHHHHHHhccc---------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            888887766432110          0134678888886431         23 788999999999999999999999999


Q ss_pred             HHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEc
Q 009899          335 SLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLN  414 (523)
Q Consensus       335 ~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~  414 (523)
                      ++|++||++|+++++|++++++. +.++++++++||||+|||+||||++|+++...+|.+.+|+.++||.||+|+.|+++
T Consensus       303 ~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~  381 (489)
T PLN02936        303 YLLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMIS  381 (489)
T ss_pred             HHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEec
Confidence            99999999999999999999874 45789999999999999999999999999886776677788899999999999999


Q ss_pred             ccccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccc
Q 009899          415 LWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVD  494 (523)
Q Consensus       415 ~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~  494 (523)
                      .+++||||++|+||++|+||||+.++........+..++|||.|+|.|+|++||++|++++++.|+++|+++++++.++.
T Consensus       382 ~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~  461 (489)
T PLN02936        382 VYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIV  461 (489)
T ss_pred             HHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccc
Confidence            99999999999999999999999654211112235689999999999999999999999999999999999988765332


Q ss_pred             cCcCCCcccccCCCceEEeeccCC
Q 009899          495 MTGTAGLTNIRATPLEILLKPRLP  518 (523)
Q Consensus       495 ~~~~~~~~~~~~~~~~v~~~~r~~  518 (523)
                      .  ..+++..++.++.|+++||..
T Consensus       462 ~--~~~~~~~~~~~~~v~~~~R~~  483 (489)
T PLN02936        462 M--TTGATIHTTNGLYMTVSRRRV  483 (489)
T ss_pred             e--ecceEEeeCCCeEEEEEeeeC
Confidence            2  345666688999999999964


No 29 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=7.3e-69  Score=528.03  Aligned_cols=441  Identities=20%  Similarity=0.270  Sum_probs=335.4

Q ss_pred             CccccccccccCCCCchHHHHHHHHhhC-CeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCc-c-ccccccCCCc
Q 009899           44 WPMIGHLHLLAGPQLPHLALGALADKYG-PLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKL-T-VGKLLGHNYA  120 (523)
Q Consensus        44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG-~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~-~-~~~~~~~~~~  120 (523)
                      .++.|++....  .+.+.++..+.++++ .+++++..+.  ++++||+.+++|+.++...|.+.... . +....+   .
T Consensus        49 ~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g---~  121 (502)
T PLN02426         49 AYLTASWAKDF--DNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG---R  121 (502)
T ss_pred             CCccHHHHHhc--ccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC---C
Confidence            56888877655  444667767888887 6788776554  89999999999998775556544322 1 112222   2


Q ss_pred             ceeeCCCChhHHHHHHhHHHhcCCHHHHHHcH--HHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHHHHHHH
Q 009899          121 NFGFSPYNAYWREMRKITASELLSNRRLELLK--HIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILM  198 (523)
Q Consensus       121 ~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~  198 (523)
                      + +++.+|+.|+++||++. +.|+.++++.+.  +.+.+.++.+++.+.+.   .+...+. ++|+.++++++++|+|+.
T Consensus       122 g-i~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~-~vd~~~~~~~~t~dvi~~  195 (502)
T PLN02426        122 G-IFNVDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSA---ADDGEGA-VLDLQDVFRRFSFDNICK  195 (502)
T ss_pred             c-eeecCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---hhcCCCc-eEcHHHHHHHHHHHHHHH
Confidence            3 46678999999999997 899998888763  67777777788777654   2221134 799999999999999999


Q ss_pred             HHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccc----cccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 009899          199 MIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLG----WLDIGGYEKAMKKTAKELDSLIEEWIEEHR  274 (523)
Q Consensus       199 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~----~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  274 (523)
                      ++||.++ +........  .++.++++........ ......|++.    +++ .+..++..++.+.+.+++.+.|++++
T Consensus       196 ~~fG~~~-~~l~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~I~~r~  270 (502)
T PLN02426        196 FSFGLDP-GCLELSLPI--SEFADAFDTASKLSAE-RAMAASPLLWKIKRLLN-IGSERKLKEAIKLVDELAAEVIRQRR  270 (502)
T ss_pred             HHhCCCC-cccCCCCCc--cHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcc-cchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998 653211111  2344444443221111 0011122221    111 12346677788889999999999887


Q ss_pred             hhhcCCCCCCccHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Q 009899          275 RKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSV  354 (523)
Q Consensus       275 ~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  354 (523)
                      +....   ...|+++.+++... +         ++++.+++.++++||+|||+.+++|++++|++||++|+||++|++++
T Consensus       271 ~~~~~---~~~dll~~ll~~~~-~---------~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~  337 (502)
T PLN02426        271 KLGFS---ASKDLLSRFMASIN-D---------DKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRV  337 (502)
T ss_pred             hcccC---CcchHHHHHHhcCC-C---------HHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence            64221   45699999997532 1         56789999999999999999999999999999999999999999998


Q ss_pred             hCCC-CCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccc-cceeeCCCCEEEEcccccccCCCCC-CCCCCC
Q 009899          355 VGKE-RLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTV-AEYHVPKGTRLVLNLWKLQTDPRVW-SDPLEF  431 (523)
Q Consensus       355 ~~~~-~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F  431 (523)
                      .+.+ ..++++++++||||+|||+||||++|++|.. .|.+.+|.++ +|+.||+||.|.++++++||||++| +||++|
T Consensus       338 ~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F  416 (502)
T PLN02426        338 MGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEF  416 (502)
T ss_pred             hCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhc
Confidence            8753 3689999999999999999999999999986 7999998777 8999999999999999999999999 999999


Q ss_pred             CCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCCceE
Q 009899          432 KPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATPLEI  511 (523)
Q Consensus       432 ~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  511 (523)
                      +||||+++.. . ....+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.........+++..|++++.|
T Consensus       417 ~PeRwl~~~~-~-~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v  494 (502)
T PLN02426        417 KPERWLKNGV-F-VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPV  494 (502)
T ss_pred             CccccCCCCC-c-CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEE
Confidence            9999997421 1 1124568999999999999999999999999999999999998654321223345678889999999


Q ss_pred             EeeccCC
Q 009899          512 LLKPRLP  518 (523)
Q Consensus       512 ~~~~r~~  518 (523)
                      ++++|..
T Consensus       495 ~~~~r~~  501 (502)
T PLN02426        495 RVRERVR  501 (502)
T ss_pred             EEEEccC
Confidence            9999964


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.1e-68  Score=475.32  Aligned_cols=443  Identities=21%  Similarity=0.319  Sum_probs=351.4

Q ss_pred             CCCCCCC-CCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCc--ccc
Q 009899           36 KPPEAAG-KWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKL--TVG  112 (523)
Q Consensus        36 ~~~pgp~-~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~--~~~  112 (523)
                      +.||.-. ++||+|++..++  +++.+++++..+|||+||++.++|+.+.++.||+....++..+...++.....  ...
T Consensus        31 ~~PPli~gwiP~lG~a~~fg--k~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~  108 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFG--KDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTT  108 (486)
T ss_pred             CCCcccccCcchhhHHHHhc--cCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhh
Confidence            4666665 589999999999  99999999999999999999999999999999999999998774444322221  122


Q ss_pred             ccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHH-HHHHhhhcccccccccchHHHHHHHH
Q 009899          113 KLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKE-IYKIWTKKKNESDQILLEMKKWFGDL  191 (523)
Q Consensus       113 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~vdl~~~~~~~  191 (523)
                      ..+|.   +++.........++.+++. ..+...+++++.+.|.+++++.+.. +.+      +  |. +..+..+...+
T Consensus       109 ~vFg~---~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~------s--~~-~d~l~~~~~~i  175 (486)
T KOG0684|consen  109 PVFGK---GVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE------S--GE-TDGLYTFCRLI  175 (486)
T ss_pred             hhcCC---CccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc------c--cc-hhHhhhhhHHH
Confidence            23332   3455555667777777777 6788899999999999999888777 222      2  55 67788888888


Q ss_pred             HHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Q 009899          192 NLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIE  271 (523)
Q Consensus       192 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~  271 (523)
                      .+.+.-.++||... ...   +++ +..+...+++-+.     .+...||.  +++.. ..++..++++.+.+.+...|.
T Consensus       176 i~tAs~~ll~~e~r-~~~---d~~-~a~l~~dLd~~F~-----~~d~~FP~--~LP~~-~~r~~~ra~~~i~k~f~~~i~  242 (486)
T KOG0684|consen  176 IFTASRLLLGGEVR-DQL---DAD-VAKLYHDLDQGFQ-----PFDFLFPY--NLPIP-LLRRRDRARKKISKIFSKIIL  242 (486)
T ss_pred             hhhhHHHhhhhhhh-hhh---cch-HHHHHHHHhcccc-----chHhhccc--CCCcc-hhhhHHHHHHHHHHHHHHHHH
Confidence            88888888888776 331   111 1233333333222     12234553  33222 345555889999999999999


Q ss_pred             HHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHH
Q 009899          272 EHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKE  350 (523)
Q Consensus       272 ~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  350 (523)
                      ++++..+.   ...|+++.+++ ..++     +..+ ++|+.+..+.+++||+.||+.|.+|++++|++|||+++.+++|
T Consensus       243 ~rr~s~s~---~~~dmlq~l~~-~y~d-----g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE  313 (486)
T KOG0684|consen  243 DRRASISK---WDNDMLQSLME-KYKD-----GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREE  313 (486)
T ss_pred             HHHhcccc---ccHHHHHHHHH-Hhhc-----CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHH
Confidence            88886543   45689999988 3332     2344 8899999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCC-CChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccc----eeeCCCCEEEEcccccccCCCCC
Q 009899          351 LDSVVGKERL-LCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAE----YHVPKGTRLVLNLWKLQTDPRVW  425 (523)
Q Consensus       351 i~~~~~~~~~-~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g----~~ip~g~~v~~~~~~~~~d~~~~  425 (523)
                      +++++|+... .+++++++||.|++||+|||||+||.+.. .|.+.+|.++.+    |.||+|..|+++++.+|+||++|
T Consensus       314 ~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~-~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif  392 (486)
T KOG0684|consen  314 QKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSL-MRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIF  392 (486)
T ss_pred             HHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhH-HHhhccceeeccCCcceecCCCCEEEeccccccCCcccc
Confidence            9999987655 99999999999999999999999998875 899999988866    99999999999999999999999


Q ss_pred             CCCCCCCCccccCCCCCCCCCC--CcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCccc
Q 009899          426 SDPLEFKPERFLTAHKDVDVKG--QHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTN  503 (523)
Q Consensus       426 ~~p~~F~P~R~l~~~~~~~~~~--~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~  503 (523)
                      +||+.|+|+||++++++.+.++  -.+.++|||+|+|.|||++||.+|+|.++..+|++||+++.+++ .+-.+...++.
T Consensus       393 ~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~-~P~~d~s~~v~  471 (486)
T KOG0684|consen  393 PDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGP-FPEVDYSRMVM  471 (486)
T ss_pred             CChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCC-CCCCCHHHhhc
Confidence            9999999999998775442223  34567999999999999999999999999999999999999973 23334455688


Q ss_pred             ccCCCceEEeeccC
Q 009899          504 IRATPLEILLKPRL  517 (523)
Q Consensus       504 ~~~~~~~v~~~~r~  517 (523)
                      .|..+++|+.+.|+
T Consensus       472 ~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  472 QPEGDVRIRYKRRP  485 (486)
T ss_pred             CCCCCceEEEeecC
Confidence            89999999999886


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.3e-59  Score=454.72  Aligned_cols=405  Identities=15%  Similarity=0.168  Sum_probs=292.2

Q ss_pred             CCCCCCCCCCCCccccccccccC---CCCchHHHHHHHHhhCC-eEEEEecCeeE-------EEecCHHHHHHHHHh---
Q 009899           33 TGKKPPEAAGKWPMIGHLHLLAG---PQLPHLALGALADKYGP-LFSIRIGVHPA-------LVVSSWEMAKELFTK---   98 (523)
Q Consensus        33 ~~~~~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~-v~~i~~~~~~~-------v~v~dp~~~~~il~~---   98 (523)
                      .+.+.|||+.++|++|++..+..   ..++..++.+.++|||+ ||+++++|.|+       |+++||++++.|+.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            35677999999999999986442   24557999999999999 99999988666       999999999999975   


Q ss_pred             -cccccCCCCCccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhccccc
Q 009899           99 -HDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNES  177 (523)
Q Consensus        99 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  177 (523)
                       ++..+........ .++|.+....++..+|+.|+++|+++. ++|+ ..++.+.+.+.+.++++++.|...   ...  
T Consensus        94 ~~~~~~~~~~~~~~-~l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~---~~~--  165 (480)
T PLN02648         94 DKRDVFTGTYMPST-AFTGGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAE---LAK--  165 (480)
T ss_pred             cccccceeeeccCc-cccCCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHH---Hhh--
Confidence             3333333222222 244422111456678999999999998 7888 577889999999999999999653   222  


Q ss_pred             ccccchHHHHHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHH---
Q 009899          178 DQILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKA---  254 (523)
Q Consensus       178 ~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~---  254 (523)
                      +. ++|+.+.++.+++|++++++||.+. +.     ......+...+..+...       ..+|..... .....++   
T Consensus       166 ~~-~vdv~~~~~~lt~~vi~~~lfG~~~-~~-----~~l~~~~~~~~~~~~~~-------~~~p~~~~~-l~~~~~~~i~  230 (480)
T PLN02648        166 KG-KAEFNDPLDQMAFNFLCKALTGKDP-SE-----TALGSDGPALIQKWLAL-------QLAPLASTG-LPHVLEELLL  230 (480)
T ss_pred             CC-CccccchHHHHHHHHHHHHHcCCCc-ch-----hhhccchhHHHHHHHHH-------HhhHHHHcC-chHHHHHHhh
Confidence            44 6999999999999999999999876 32     11001122222221110       001110000 0000000   


Q ss_pred             ---------HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHH-HHHhhh
Q 009899          255 ---------MKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMT-IIVGAT  323 (523)
Q Consensus       255 ---------~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~-~~~Ag~  323 (523)
                               .....+.+.+++++                  .++.+++..++.       .+ ++++.++++. +.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~ll~~~~~~-------~l~~~ei~~~~l~~~~~~t~  285 (480)
T PLN02648        231 HTFPLPFFLVKSDYDKLYDFFRA------------------SATEALDLAEKF-------GISREEALHNLLFVLGFNAF  285 (480)
T ss_pred             cccCCchhhhhccHHHHHHHHHH------------------HHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHhh
Confidence                     00011111111111                  122334332222       25 7778887765 446778


Q ss_pred             hchHHHHHHHHHHHhcCHH-HHHHHHHHHHHhhCC-CCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeeccccccc
Q 009899          324 DTTTVNLTWALSLLLNNRR-ELEKVKKELDSVVGK-ERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVA  401 (523)
Q Consensus       324 ~tt~~~l~~~l~~L~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~  401 (523)
                      +||+++++|++++|++||+ +|++|++|++++.+. ++.++++++++|||+++||+||||++|+++.. .|.+.+|++++
T Consensus       286 ~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~d~~l~  364 (480)
T PLN02648        286 GGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRAREDFVIE  364 (480)
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc-cceecCCEEEe
Confidence            8888899999999999995 999999999999863 45689999999999999999999999999976 78899999995


Q ss_pred             ----ceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccc---------cCCCCCCCccHHHH
Q 009899          402 ----EYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLP---------FGGGRRACPGISFA  468 (523)
Q Consensus       402 ----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~---------Fg~G~r~C~G~~~A  468 (523)
                          ||.||+|+.|+++.+.+|+||++|+||++|+|+||+++++.     ....+++         ||+|+|.|+|++||
T Consensus       365 ~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~-----~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A  439 (480)
T PLN02648        365 SHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE-----KLLKYVFWSNGRETESPTVGNKQCAGKDFV  439 (480)
T ss_pred             cCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc-----ccccccccCCCcccCCCCCCCccCccHHHH
Confidence                89999999999999999999999999999999999865321     1122333         47788999999999


Q ss_pred             HHHHHHHHHHHHhhcc-eecCCCc
Q 009899          469 LQMSHLALAAFLHAFD-ISTPGEA  491 (523)
Q Consensus       469 ~~~~~~~~~~ll~~~~-~~~~~~~  491 (523)
                      ++|++++++.|+++|+ +++.++.
T Consensus       440 ~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        440 VLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             HHHHHHHHHHHHHHhCEEeecCCc
Confidence            9999999999999998 9987653


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=5.1e-54  Score=411.46  Aligned_cols=381  Identities=27%  Similarity=0.349  Sum_probs=301.4

Q ss_pred             hHHHHHHHHhhCCeEEEEecCee--EEEecCHHHHHHHHHhcccccCCCCCccccc--cccCCCcceeeCCCChhHHHHH
Q 009899           60 HLALGALADKYGPLFSIRIGVHP--ALVVSSWEMAKELFTKHDVDISSRPKLTVGK--LLGHNYANFGFSPYNAYWREMR  135 (523)
Q Consensus        60 ~~~~~~~~~kyG~v~~i~~~~~~--~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~R  135 (523)
                      ......+.+.||.++.++..+..  .++++++++++++++++. .+++........  .....+.+.+...+|+.|+++|
T Consensus        25 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~R  103 (411)
T COG2124          25 RFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLR  103 (411)
T ss_pred             hhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHH
Confidence            34555678888988888776654  899999999999998874 222222111110  0111122225667899999999


Q ss_pred             HhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHHHHHHHHHhcccccCcccccchH
Q 009899          136 KITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDET  215 (523)
Q Consensus       136 ~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~  215 (523)
                      |+++ +.|+++.++.+.+.+.+.++++++.+ ..        ++ .+++.+.+..+++++|+ .+||.+.      ++..
T Consensus       104 kl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~~--------~~-~~~v~~~a~~l~~~vi~-~l~Gv~~------~~~~  165 (411)
T COG2124         104 KLLA-PAFTPRALRGYRPLIREIADRLLDDL-WQ--------GG-ADLVLDFAAELTLRVIA-ELLGVPL------EDRP  165 (411)
T ss_pred             HHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-cc--------CC-chhHHHHhhhhhHHHHH-HHhCCCH------HHHH
Confidence            9998 89999999999999999999999988 43        33 78999999999999999 9999887      3332


Q ss_pred             HHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHh
Q 009899          216 EVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVL  295 (523)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~  295 (523)
                         .+...........        .|...   ......+..++.+.+.+++.++|++++..      ...|+++.|+...
T Consensus       166 ---~~~~~~~~~~~~~--------~~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~~------~~~dlls~l~~a~  225 (411)
T COG2124         166 ---QLLRWSDALLLRL--------DPDLG---PEEPWRRARAARRELDAYLRALIAERRAA------PRDDLLSLLLSAE  225 (411)
T ss_pred             ---HHHHHHHHHHhcc--------CcccC---CcccHHHHHHHHHHHHHHHHHHHHHhccC------CcccHHHHHHHHh
Confidence               3333333322210        01111   11235677788999999999999999832      6679999999987


Q ss_pred             hhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHH
Q 009899          296 EGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQA  374 (523)
Q Consensus       296 ~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a  374 (523)
                      +++     +..+ ++|+.++++++++||+|||+.+|+|+++.|++||++++++++|.+.                ||+.+
T Consensus       226 ~~~-----~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~  284 (411)
T COG2124         226 DDG-----GGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEA  284 (411)
T ss_pred             hCC-----CCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHH
Confidence            765     2256 9999999999999999999999999999999999999999999874                79999


Q ss_pred             HHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccc
Q 009899          375 VIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLP  454 (523)
Q Consensus       375 ~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~  454 (523)
                      +|+|+||++||++. ..|.+.+|++++|+.||+|+.|.++++.+||||++|++|++|+|+||.            ..++|
T Consensus       285 ~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------------~~~l~  351 (411)
T COG2124         285 VVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------------NAHLP  351 (411)
T ss_pred             HHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------------CCCcC
Confidence            99999999999998 699999999999999999999999999999999999999999999996            34799


Q ss_pred             cCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCCceEEeecc
Q 009899          455 FGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATPLEILLKPR  516 (523)
Q Consensus       455 Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  516 (523)
                      ||+|+|.|+|.+||++|++++++.|+++|+.....+ ....  ....+..+..+..+.++.|
T Consensus       352 FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~~~~--~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         352 FGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-PPPL--VRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-CCCc--cccccccCCCcceeeeecC
Confidence            999999999999999999999999999999877665 1112  1223344556666666554


No 33 
>PHA03049 IMV membrane protein; Provisional
Probab=75.76  E-value=8.4  Score=25.40  Aligned_cols=41  Identities=15%  Similarity=0.259  Sum_probs=25.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCccccc
Q 009899            9 DTSIVVVGACATLVVFYYLQKWSNTGKKPPEAAGKWPMIGH   49 (523)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~   49 (523)
                      ...++++|+++..++++-++.+.......||-|...+..-+
T Consensus         4 d~~l~iICVaIi~lIvYgiYnkk~~~q~~~p~~e~ye~~e~   44 (68)
T PHA03049          4 DIILVIICVVIIGLIVYGIYNKKTTTSQNPPSQEKYEKMED   44 (68)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccCCCCCChhhccCchh
Confidence            34566777777777777777777666666655543444333


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=61.31  E-value=6.2  Score=25.79  Aligned_cols=9  Identities=44%  Similarity=0.899  Sum_probs=6.7

Q ss_pred             CCccccCCC
Q 009899          432 KPERFLTAH  440 (523)
Q Consensus       432 ~P~R~l~~~  440 (523)
                      ||||||.-.
T Consensus        44 DPERWLP~~   52 (59)
T PF08492_consen   44 DPERWLPKR   52 (59)
T ss_pred             CccccCchh
Confidence            788888654


No 35 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=60.14  E-value=27  Score=23.28  Aligned_cols=31  Identities=10%  Similarity=0.216  Sum_probs=18.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 009899            9 DTSIVVVGACATLVVFYYLQKWSNTGKKPPE   39 (523)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p   39 (523)
                      ...++++|+++..++.+.++.+.......+|
T Consensus         4 d~iLi~ICVaii~lIlY~iYnr~~~~q~~~~   34 (68)
T PF05961_consen    4 DFILIIICVAIIGLILYGIYNRKKTTQNTNP   34 (68)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccCCCCC
Confidence            3456666776667777766666544433333


No 36 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=54.08  E-value=73  Score=22.24  Aligned_cols=18  Identities=11%  Similarity=0.109  Sum_probs=7.8

Q ss_pred             HHHHHHHHHHHHHHHhhc
Q 009899           14 VVGACATLVVFYYLQKWS   31 (523)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~   31 (523)
                      ++++.+++++.+..+++.
T Consensus        10 ~V~V~IVclliya~YRR~   27 (92)
T PHA02681         10 VIVISIVCYIVIMMYRRS   27 (92)
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            444444444444444444


No 37 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=52.25  E-value=4.5  Score=34.38  Aligned_cols=43  Identities=23%  Similarity=0.278  Sum_probs=31.9

Q ss_pred             ChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEE
Q 009899          369 LVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVL  413 (523)
Q Consensus       369 lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~  413 (523)
                      -..+.|||.|+.-+..-...  .=+..+|+.++|..||+||.+.-
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~v--rlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSRV--RLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCEE--EEEEcCceEECCEEeCCCCEEEE
Confidence            34678899999887665432  12346789999999999998865


No 38 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=50.75  E-value=15  Score=23.75  Aligned_cols=25  Identities=32%  Similarity=0.432  Sum_probs=18.8

Q ss_pred             HHHHHHhcCHHHHHHHHHHHHHhhC
Q 009899          332 WALSLLLNNRRELEKVKKELDSVVG  356 (523)
Q Consensus       332 ~~l~~L~~~p~~~~~l~~Ei~~~~~  356 (523)
                      -++.||.+||++.++|.+.=.+.+|
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEec
Confidence            3577999999999999875444443


No 39 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=38.86  E-value=14  Score=23.33  Aligned_cols=11  Identities=45%  Similarity=0.987  Sum_probs=9.2

Q ss_pred             cccCCCCCCCc
Q 009899          453 LPFGGGRRACP  463 (523)
Q Consensus       453 ~~Fg~G~r~C~  463 (523)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            46999999985


No 40 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=38.79  E-value=98  Score=19.34  Aligned_cols=42  Identities=21%  Similarity=0.162  Sum_probs=29.7

Q ss_pred             HHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 009899          311 IKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELD  352 (523)
Q Consensus       311 i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  352 (523)
                      +..++..++-.|.|-.+-.+.--+...--||+....+-.|++
T Consensus         7 ~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    7 VLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            444556666667777777777777777778888887777763


No 41 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=37.91  E-value=30  Score=27.04  Aligned_cols=23  Identities=13%  Similarity=0.300  Sum_probs=16.8

Q ss_pred             CCCccHHHHHHHHHHHHHHHHhh
Q 009899          460 RACPGISFALQMSHLALAAFLHA  482 (523)
Q Consensus       460 r~C~G~~~A~~~~~~~~~~ll~~  482 (523)
                      -.|.|+.||+.++-.++.+|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            46999999999999999999864


No 42 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=36.54  E-value=96  Score=23.41  Aligned_cols=12  Identities=33%  Similarity=0.437  Sum_probs=9.3

Q ss_pred             CCcccccccccc
Q 009899           43 KWPMIGHLHLLA   54 (523)
Q Consensus        43 ~~p~~G~~~~~~   54 (523)
                      .-|+.||+....
T Consensus        45 ~~p~YgNL~~~q   56 (107)
T PF15330_consen   45 DDPCYGNLELQQ   56 (107)
T ss_pred             CCcccccccccc
Confidence            588899987664


No 43 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=35.10  E-value=1.7e+02  Score=20.99  Aligned_cols=48  Identities=10%  Similarity=0.052  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Q 009899          308 DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVV  355 (523)
Q Consensus       308 ~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  355 (523)
                      .+.........++-=+++++....-.+.+.++||+..+++.+.+..-+
T Consensus        31 ~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   31 SDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            344555667888999999999999999999999999999999887644


No 44 
>PF15050 SCIMP:  SCIMP protein
Probab=34.04  E-value=64  Score=24.45  Aligned_cols=14  Identities=14%  Similarity=-0.021  Sum_probs=7.3

Q ss_pred             CCCCCC-CCcccccc
Q 009899           37 PPEAAG-KWPMIGHL   50 (523)
Q Consensus        37 ~~pgp~-~~p~~G~~   50 (523)
                      .||.|+ +.++.|+.
T Consensus        69 LPpLPPRg~~s~~~~   83 (133)
T PF15050_consen   69 LPPLPPRGSPSPEDS   83 (133)
T ss_pred             CCCCCCCCCCCcccc
Confidence            344443 46666654


No 45 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=33.93  E-value=2e+02  Score=21.50  Aligned_cols=59  Identities=24%  Similarity=0.249  Sum_probs=40.9

Q ss_pred             CCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecC------eeEEEecCHHHHHHHHHh
Q 009899           36 KPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGV------HPALVVSSWEMAKELFTK   98 (523)
Q Consensus        36 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~------~~~v~v~dp~~~~~il~~   98 (523)
                      +.||-...+-++.|++.-.    ..+-+-++.-+||+|..|++|.      .-+||-.|-.+++.....
T Consensus        12 rlppevnriLyirNLp~~I----TseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   12 RLPPEVNRILYIRNLPFKI----TSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCChhhheeEEEecCCccc----cHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            3444444566666665332    2567778899999999999974      457888888888877654


No 46 
>PF05084 GRA6:  Granule antigen protein (GRA6);  InterPro: IPR008119  Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage [].  The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=32.47  E-value=1.2e+02  Score=24.33  Aligned_cols=39  Identities=15%  Similarity=0.382  Sum_probs=22.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCccccc
Q 009899           11 SIVVVGACATLVVFYYLQKWSNTGKKPPEAAGKWPMIGH   49 (523)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~   49 (523)
                      ..++|.+.+..++++++++..++..+.|.|-.+-|--|+
T Consensus       155 G~~VlA~~VA~L~~~F~RR~~rrsppepsgdgG~~~~G~  193 (215)
T PF05084_consen  155 GAVVLAVSVAMLTWFFLRRTGRRSPPEPSGDGGGNDAGN  193 (215)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCcccc
Confidence            445555556666677767666544444445455555554


No 47 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=32.46  E-value=67  Score=22.97  Aligned_cols=18  Identities=33%  Similarity=0.488  Sum_probs=15.2

Q ss_pred             CHHHHHHHHHHHHHhhCC
Q 009899          340 NRRELEKVKKELDSVVGK  357 (523)
Q Consensus       340 ~p~~~~~l~~Ei~~~~~~  357 (523)
                      .|++.+.+|+||-+++..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            389999999999988754


No 48 
>COG4459 NapE Periplasmic nitrate reductase system, NapE component [Energy production and conversion]
Probab=29.63  E-value=83  Score=20.21  Aligned_cols=8  Identities=13%  Similarity=0.015  Sum_probs=5.0

Q ss_pred             CCCCCCCC
Q 009899           36 KPPEAAGK   43 (523)
Q Consensus        36 ~~~pgp~~   43 (523)
                      -.||||++
T Consensus        54 fGPPGpp~   61 (62)
T COG4459          54 FGPPGPPG   61 (62)
T ss_pred             hCCCCCCC
Confidence            35777763


No 49 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=29.40  E-value=14  Score=35.35  Aligned_cols=44  Identities=20%  Similarity=0.265  Sum_probs=32.3

Q ss_pred             CChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEE
Q 009899          368 KLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVL  413 (523)
Q Consensus       368 ~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~  413 (523)
                      .-..+.|||.|+.-+.-....  .=+..+|+.++|..||+||.|.-
T Consensus       254 ~~n~I~A~V~~~qtv~~G~~v--rlRLle~~~v~~~~ipkgt~l~g  297 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGSAV--KLRLLEPIQAGDLVIPKGTVLYG  297 (410)
T ss_pred             CCCceEEEEcCceEEecCCEE--EEEEcCceeeCCEEecCCCEEEE
Confidence            345678899999887654421  12346789999999999998864


No 50 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=26.73  E-value=34  Score=29.29  Aligned_cols=25  Identities=32%  Similarity=0.583  Sum_probs=20.0

Q ss_pred             EEEccccc-ccCCCCCCCCCCCCCcc
Q 009899          411 LVLNLWKL-QTDPRVWSDPLEFKPER  435 (523)
Q Consensus       411 v~~~~~~~-~~d~~~~~~p~~F~P~R  435 (523)
                      +.++-|.- |.|+.+|.|...|+|-|
T Consensus       186 LGiPGW~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  186 LGIPGWWPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             cCCCCCCCCCCCcccccCccccCCCC
Confidence            34444555 89999999999999987


No 51 
>PRK06789 flagellar motor switch protein; Validated
Probab=25.31  E-value=68  Score=22.26  Aligned_cols=40  Identities=13%  Similarity=0.095  Sum_probs=31.6

Q ss_pred             HHHHHhcCCCCCccccceeeccc--ccccceeeCCCCEEEEc
Q 009899          375 VIKETLRLYPAGPLAGARQFTED--CTVAEYHVPKGTRLVLN  414 (523)
Q Consensus       375 ~i~EtlRl~p~~~~~~~R~~~~~--~~i~g~~ip~g~~v~~~  414 (523)
                      -++|-+.|.+..-..+-|.+.+.  ..++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            36788999988776666776664  55689999999999875


No 52 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=24.63  E-value=1e+02  Score=20.71  Aligned_cols=14  Identities=29%  Similarity=0.579  Sum_probs=11.9

Q ss_pred             ChhHHHHHHHHhcC
Q 009899          369 LVYLQAVIKETLRL  382 (523)
Q Consensus       369 lp~l~a~i~EtlRl  382 (523)
                      .-+++.+|+|++|.
T Consensus        40 ~~fv~~~IkEA~RF   53 (65)
T PF15300_consen   40 KQFVEMIIKEAARF   53 (65)
T ss_pred             HHHHHHHHHHHHHH
Confidence            35789999999996


No 53 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=24.52  E-value=1.4e+02  Score=23.35  Aligned_cols=41  Identities=20%  Similarity=0.139  Sum_probs=31.8

Q ss_pred             CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhc
Q 009899           57 QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKH   99 (523)
Q Consensus        57 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~   99 (523)
                      ++....+.+|.++||.+--.  .+...+...|++.++++...+
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            45567899999999987653  245677888999999998654


No 54 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=24.14  E-value=1.9e+02  Score=18.14  Aligned_cols=34  Identities=24%  Similarity=0.184  Sum_probs=24.7

Q ss_pred             HHHHHhhCCeEEEEecC----eeEEEecCHHHHHHHHH
Q 009899           64 GALADKYGPLFSIRIGV----HPALVVSSWEMAKELFT   97 (523)
Q Consensus        64 ~~~~~kyG~v~~i~~~~----~~~v~v~dp~~~~~il~   97 (523)
                      .++..+||+|-.+.+..    .-.|-..+++.++....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            46678999999888643    34666679999888775


No 55 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=23.50  E-value=69  Score=23.74  Aligned_cols=19  Identities=32%  Similarity=0.450  Sum_probs=15.5

Q ss_pred             CcccccccCCCCCCCccHH
Q 009899          448 QHFELLPFGGGRRACPGIS  466 (523)
Q Consensus       448 ~~~~~~~Fg~G~r~C~G~~  466 (523)
                      .-...+|||.|.-+|+|..
T Consensus       103 ~gss~~p~GaGaAaC~aAa  121 (131)
T PF14459_consen  103 CGSSNNPFGAGAAACFAAA  121 (131)
T ss_pred             cCcccCCcCccHHHHHHHH
Confidence            4456799999999999863


No 56 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=23.13  E-value=1.1e+02  Score=18.46  Aligned_cols=18  Identities=11%  Similarity=0.060  Sum_probs=14.1

Q ss_pred             HHHHHHHhcCHHHHHHHH
Q 009899          331 TWALSLLLNNRRELEKVK  348 (523)
Q Consensus       331 ~~~l~~L~~~p~~~~~l~  348 (523)
                      .|-+.-++++||+|.-|.
T Consensus        13 l~gl~~~l~DpdvqrgL~   30 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLG   30 (42)
T ss_pred             HHHHHHHHcCHHHHHHHH
Confidence            466777889999998765


No 57 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=22.63  E-value=4.2e+02  Score=26.23  Aligned_cols=16  Identities=6%  Similarity=0.349  Sum_probs=10.0

Q ss_pred             HhhCCeEEEEecCeeE
Q 009899           68 DKYGPLFSIRIGVHPA   83 (523)
Q Consensus        68 ~kyG~v~~i~~~~~~~   83 (523)
                      -+||.|++-.+-++.+
T Consensus       221 Grfg~V~KaqL~~~~V  236 (534)
T KOG3653|consen  221 GRFGCVWKAQLDNRLV  236 (534)
T ss_pred             CccceeehhhccCcee
Confidence            4677777766655543


No 58 
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=22.36  E-value=3.1e+02  Score=21.96  Aligned_cols=49  Identities=12%  Similarity=0.112  Sum_probs=36.0

Q ss_pred             cccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHh
Q 009899           46 MIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTK   98 (523)
Q Consensus        46 ~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~   98 (523)
                      ++|++..-.    ..+.+.++.++||+|..+.+.         +.-+|-..++++++.++..
T Consensus        38 fVgnL~~~~----te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~   95 (144)
T PLN03134         38 FIGGLSWGT----DDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE   95 (144)
T ss_pred             EEeCCCCCC----CHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence            455554332    367888999999999887663         3457888899999999864


No 59 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=22.17  E-value=1.4e+02  Score=29.59  Aligned_cols=32  Identities=6%  Similarity=0.072  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCc
Q 009899           14 VVGACATLVVFYYLQKWSNTGKKPPEAAGKWP   45 (523)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p   45 (523)
                      +++.++++++++++......+.+.+|+|++.+
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ppgp~   41 (463)
T PLN02196         10 LFAGALFLCLLRFLAGFRRSSSTKLPLPPGTM   41 (463)
T ss_pred             HHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC
Confidence            33333444455555555666788999998754


No 60 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=20.75  E-value=1.4e+02  Score=23.17  Aligned_cols=11  Identities=18%  Similarity=0.591  Sum_probs=4.4

Q ss_pred             HHHHHHHHhhc
Q 009899           21 LVVFYYLQKWS   31 (523)
Q Consensus        21 ~~~~~~~~~~~   31 (523)
                      ++++|+++|+.
T Consensus        82 lli~y~irR~~   92 (122)
T PF01102_consen   82 LLISYCIRRLR   92 (122)
T ss_dssp             HHHHHHHHHHS
T ss_pred             HHHHHHHHHHh
Confidence            33344444333


No 61 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=20.49  E-value=1.2e+02  Score=17.77  Aligned_cols=12  Identities=0%  Similarity=0.077  Sum_probs=9.0

Q ss_pred             hcCHHHHHHHHH
Q 009899          338 LNNRRELEKVKK  349 (523)
Q Consensus       338 ~~~p~~~~~l~~  349 (523)
                      -+|||+++.+++
T Consensus        24 ~~HPei~~~i~~   35 (38)
T PF14483_consen   24 ERHPEIQQEIRS   35 (38)
T ss_dssp             HHSTHHHHHHHT
T ss_pred             HhChhHHHHHHh
Confidence            389998887764


No 62 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=20.23  E-value=2.7e+02  Score=19.78  Aligned_cols=39  Identities=13%  Similarity=0.083  Sum_probs=29.2

Q ss_pred             hHHHHHHHHhhCCe---EEEEecCeeEEEecCH-----HHHHHHHHh
Q 009899           60 HLALGALADKYGPL---FSIRIGVHPALVVSSW-----EMAKELFTK   98 (523)
Q Consensus        60 ~~~~~~~~~kyG~v---~~i~~~~~~~v~v~dp-----~~~~~il~~   98 (523)
                      .+..++++++|.++   +++..+..+-+.|++.     +.+.++++.
T Consensus        23 ~EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLqE   69 (81)
T PRK10597         23 GELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQE   69 (81)
T ss_pred             HHHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHHH
Confidence            45677788899877   8999988888887544     666666653


No 63 
>PLN02687 flavonoid 3'-monooxygenase
Probab=20.20  E-value=1.3e+02  Score=30.44  Aligned_cols=22  Identities=27%  Similarity=0.320  Sum_probs=10.2

Q ss_pred             CccccchhhHHHHHHHHHHHHH
Q 009899            1 MNFLLPYLDTSIVVVGACATLV   22 (523)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~   22 (523)
                      |++.++.+..+..++.++.+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~   22 (517)
T PLN02687          1 MDLPLPLLLGTVAVSVLVWCLL   22 (517)
T ss_pred             CCCcchHHHHHHHHHHHHHHHH
Confidence            5666666544333333333333


No 64 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=20.18  E-value=1.3e+02  Score=24.17  Aligned_cols=34  Identities=21%  Similarity=0.435  Sum_probs=24.1

Q ss_pred             ecccccccceeeCCCCEEEEccc-------ccccCCCCCCC
Q 009899          394 FTEDCTVAEYHVPKGTRLVLNLW-------KLQTDPRVWSD  427 (523)
Q Consensus       394 ~~~~~~i~g~~ip~g~~v~~~~~-------~~~~d~~~~~~  427 (523)
                      ..+|+.++|..||+|+.-+..+.       .+|++...|..
T Consensus        52 f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~   92 (145)
T PF11138_consen   52 FSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA   92 (145)
T ss_pred             ECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc
Confidence            35789999999999998776543       23556566643


Done!