Query 009899
Match_columns 523
No_of_seqs 201 out of 1934
Neff 11.2
Searched_HMMs 29240
Date Mon Mar 25 15:28:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009899.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009899hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tbg_A Cytochrome P450 2D6; mo 100.0 8.8E-79 3E-83 605.8 41.9 465 31-518 5-477 (479)
2 3swz_A Steroid 17-alpha-hydrox 100.0 2.5E-78 8.4E-83 604.1 43.7 466 33-517 5-479 (494)
3 3pm0_A Cypib1, cytochrome P450 100.0 1.5E-78 5.2E-83 608.3 36.5 471 32-520 5-487 (507)
4 3nxu_A Cytochrome P450 3A4; al 100.0 2.3E-78 7.8E-83 603.4 34.4 457 34-519 12-477 (485)
5 3k9v_A 1,25-dihydroxyvitamin D 100.0 3.2E-77 1.1E-81 595.1 42.2 458 28-516 16-482 (482)
6 2hi4_A Cytochrome P450 1A2; CY 100.0 6.1E-77 2.1E-81 593.2 40.1 469 28-517 8-488 (495)
7 3e6i_A CYPIIE1, P450-J, cytoch 100.0 4.7E-76 1.6E-80 585.5 43.4 462 31-519 5-474 (476)
8 1po5_A Cytochrome P450 2B4; ox 100.0 8.8E-76 3E-80 582.2 43.8 459 34-518 8-474 (476)
9 3qz1_A Steroid 21-hydroxylase; 100.0 2.2E-77 7.5E-82 598.0 32.4 459 24-518 17-485 (496)
10 3czh_A Cytochrome P450 2R1; vi 100.0 3.3E-76 1.1E-80 585.4 40.3 462 33-518 9-477 (481)
11 3s79_A Cytochrome P450 19A1; o 100.0 1.9E-76 6.6E-81 592.3 38.7 452 30-521 39-500 (503)
12 2fdv_A Cytochrome P450 2A6; CY 100.0 5.7E-76 2E-80 583.6 41.5 460 33-518 7-474 (476)
13 1r9o_A Cytochrome P450 2C9; mo 100.0 2.2E-75 7.4E-80 579.9 40.3 459 34-518 9-475 (477)
14 3ld6_A Lanosterol 14-alpha dem 100.0 3.7E-76 1.3E-80 582.5 31.0 441 35-518 10-455 (461)
15 3n9y_A Cholesterol SIDE-chain 100.0 2.4E-74 8.3E-79 574.7 38.1 464 30-520 3-478 (487)
16 2ve3_A Putative cytochrome P45 100.0 7.6E-74 2.6E-78 562.5 37.3 440 28-517 4-444 (444)
17 2cib_A Cytochrome P450 51; hem 100.0 6.6E-73 2.3E-77 557.7 34.2 444 36-520 4-452 (455)
18 2ij2_A Cytochrome P450 BM3; mo 100.0 2.3E-72 7.9E-77 555.8 36.2 447 36-518 3-453 (470)
19 3gw9_A Sterol 14alpha-demethyl 100.0 1E-72 3.5E-77 557.6 32.4 439 36-517 3-450 (450)
20 3mdm_A Cholesterol 24-hydroxyl 100.0 3.1E-71 1.1E-75 547.3 41.1 428 57-518 10-443 (456)
21 3i3k_A Lanosterol 14-alpha dem 100.0 8E-71 2.7E-75 544.9 32.0 441 32-514 7-452 (461)
22 3dbg_A Putative cytochrome P45 100.0 3E-71 1E-75 548.3 26.8 437 35-518 22-463 (467)
23 3v8d_A Cholesterol 7-alpha-mon 100.0 7.3E-68 2.5E-72 527.8 24.3 451 33-518 10-487 (491)
24 3dax_A Cytochrome P450 7A1; ch 100.0 2.7E-67 9.3E-72 524.4 26.7 449 34-518 11-487 (491)
25 2cd8_A Cytochrome P450 monooxy 100.0 8.4E-66 2.9E-70 502.0 34.8 401 30-518 20-430 (436)
26 3b6h_A Prostacyclin synthase; 100.0 2.1E-65 7.1E-70 511.3 33.9 449 32-517 14-490 (498)
27 1izo_A P450bsbeta, cytochrome 100.0 6E-64 2.1E-68 488.1 37.1 401 44-518 8-417 (417)
28 3b98_A Prostaglandin I2 syntha 100.0 4.7E-65 1.6E-69 506.0 29.3 438 32-518 14-472 (475)
29 1ued_A P450 OXYC, P450 monooxy 100.0 7E-63 2.4E-67 477.6 35.0 384 35-513 9-406 (406)
30 3awm_A Fatty acid alpha-hydrox 100.0 1.9E-62 6.6E-67 477.2 36.4 401 38-516 4-413 (415)
31 1jfb_A Nitric-oxide reductase 100.0 7.2E-62 2.5E-66 471.4 38.6 373 37-490 2-382 (404)
32 1n97_A CYP175A1; electron tran 100.0 1.4E-63 4.7E-68 480.4 19.6 382 40-517 3-387 (389)
33 2zbx_A Cytochrome P450-SU1; be 100.0 1.3E-60 4.3E-65 462.7 39.5 391 36-514 5-407 (412)
34 3aba_A Cytochrome P450; oxidor 100.0 1E-60 3.6E-65 461.9 38.6 376 57-517 19-403 (403)
35 1cpt_A Cytochrome P450-TERP; o 100.0 1.2E-61 4E-66 472.7 31.9 405 35-516 5-428 (428)
36 2jjn_A Cytochrome P450 113A1; 100.0 2E-61 6.9E-66 468.5 31.6 402 23-520 6-410 (411)
37 3a4g_A Vitamin D hydroxylase; 100.0 2.1E-60 7.1E-65 460.3 37.1 376 57-519 20-404 (411)
38 3abb_A CYP105D6, cytochrome P4 100.0 3.4E-61 1.2E-65 466.4 30.6 374 57-517 24-408 (408)
39 3ejb_B Biotin biosynthesis cyt 100.0 1.9E-60 6.5E-65 461.4 35.3 380 57-519 13-399 (404)
40 2zwu_A Camphor 5-monooxygenase 100.0 7.4E-61 2.5E-65 463.7 30.2 397 30-519 5-413 (415)
41 4fb2_A P450CIN; heme, monooxyg 100.0 5.2E-61 1.8E-65 463.8 28.2 374 57-520 19-397 (398)
42 1gwi_A CYP154C1, cytochrome P4 100.0 9.1E-61 3.1E-65 463.2 29.7 378 57-518 17-411 (411)
43 1odo_A Putative cytochrome P45 100.0 4.9E-60 1.7E-64 458.3 34.4 379 57-515 15-407 (408)
44 1s1f_A Putative cytochrome P45 100.0 5.8E-60 2E-64 457.1 34.5 386 36-513 8-404 (406)
45 2y5n_A MYCG, P-450-like protei 100.0 2E-59 6.7E-64 454.0 37.9 373 57-513 37-417 (417)
46 2dkk_A Cytochrome P450; CYP158 100.0 5.2E-60 1.8E-64 457.2 33.6 373 57-517 27-411 (411)
47 3tyw_A Putative cytochrome P45 100.0 4E-59 1.4E-63 453.3 36.6 351 57-490 29-389 (417)
48 1q5d_A P450 epoxidase; cytochr 100.0 4.9E-60 1.7E-64 459.6 30.1 381 57-519 26-419 (419)
49 2uuq_A CYP130, cytochrome P450 100.0 1.4E-59 4.6E-64 455.1 29.8 385 46-516 11-413 (414)
50 2xbk_A PIMD protein; epoxidati 100.0 1.6E-58 5.6E-63 445.3 37.2 366 57-513 26-404 (404)
51 2xkr_A CYP142, putative cytoch 100.0 5.3E-59 1.8E-63 449.8 33.3 375 57-518 18-396 (398)
52 2z3t_A Cytochrome P450; monoxy 100.0 2E-59 6.8E-64 455.5 30.5 378 57-516 20-416 (425)
53 1z8o_A 6-deoxyerythronolide B 100.0 7.2E-59 2.5E-63 449.5 34.1 370 57-513 14-402 (404)
54 3buj_A CALO2; heme, iron, meta 100.0 4.8E-59 1.6E-63 450.0 32.7 374 57-517 13-397 (397)
55 3dsk_A Cytochrome P450 74A, ch 100.0 5.6E-61 1.9E-65 478.9 19.8 415 31-490 23-472 (495)
56 3ivy_A Cytochrome P450 CYP125; 100.0 1.1E-59 3.8E-64 458.8 28.1 395 35-519 17-431 (433)
57 2z36_A MOXA, cytochrome P450 t 100.0 2.4E-58 8E-63 446.2 37.0 390 35-515 6-409 (413)
58 3dan_A Cytochrome P450 74A2; A 100.0 1.8E-59 6E-64 465.7 27.4 406 31-491 4-455 (473)
59 3lxh_A Cytochrome P450; heme, 100.0 5.9E-59 2E-63 452.7 30.2 379 57-519 38-420 (421)
60 3tkt_A Cytochrome P450; aromat 100.0 7.3E-59 2.5E-63 455.0 30.5 384 59-515 47-449 (450)
61 3nc3_A Cytochrome P450 CYPX; c 100.0 2.5E-59 8.6E-64 456.7 27.0 385 57-515 53-440 (441)
62 3oo3_A OXY protein; cytochrome 100.0 5E-58 1.7E-62 441.3 35.4 366 57-513 12-384 (384)
63 2wm5_A CYP124, putative cytoch 100.0 3.6E-58 1.2E-62 447.7 33.9 376 58-513 45-434 (435)
64 3oft_A Cytochrome P450, CYP101 100.0 1E-58 3.4E-63 448.1 28.2 369 57-514 24-395 (396)
65 1n40_A P450 MT2, cytochrome P4 100.0 2.2E-58 7.4E-63 444.6 30.1 369 57-513 16-396 (396)
66 1lfk_A OXYB, P450 monooxygenas 100.0 1.2E-58 3.9E-63 447.2 28.2 363 63-512 19-397 (398)
67 3mgx_A Putative P450 monooxyge 100.0 1.3E-58 4.5E-63 447.6 27.5 371 57-516 37-415 (415)
68 3r9b_A Cytochrome P450 164A2; 100.0 5.6E-58 1.9E-62 446.2 30.2 379 57-517 29-418 (418)
69 3rwl_A Cytochrome P450 alkane 100.0 3E-57 1E-61 440.0 33.8 376 57-515 38-426 (426)
70 3p3o_A Cytochrome P450; monoox 100.0 3.1E-56 1.1E-60 432.2 27.9 374 57-515 33-415 (416)
71 2wiy_A XPLA-heme, cytochrome P 100.0 1.1E-55 3.6E-60 425.2 29.7 371 57-513 20-393 (394)
72 1io7_A Cytochrome P450 CYP119; 100.0 6.5E-56 2.2E-60 423.3 27.0 354 60-517 2-368 (368)
73 2rfb_A Cytochrome P450; heme, 100.0 7.1E-55 2.4E-59 411.9 24.2 319 68-491 2-325 (343)
74 3b4x_A 367AA long hypothetical 100.0 1.3E-54 4.6E-59 413.5 24.0 352 60-515 2-366 (367)
75 4dnj_A Putative cytochrome P45 100.0 1.2E-53 4.1E-58 412.8 28.1 385 42-515 18-411 (412)
76 4dxy_A Cytochrome P450, CYP101 100.0 4.2E-48 1.4E-52 373.0 31.0 373 57-513 37-413 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 2.8E-46 9.6E-51 351.6 1.4 333 37-512 35-380 (381)
78 3lqv_A PRE-mRNA branch site pr 58.2 47 0.0016 24.0 7.7 57 37-97 3-65 (115)
79 1s79_A Lupus LA protein; RRM, 58.2 36 0.0012 24.3 6.7 52 45-100 14-73 (103)
80 2diu_A KIAA0430 protein; struc 51.3 15 0.00052 25.9 3.5 63 45-108 12-76 (96)
81 2krb_A Eukaryotic translation 47.8 58 0.002 21.6 6.8 39 60-98 21-66 (81)
82 3d2w_A TAR DNA-binding protein 46.0 51 0.0017 22.6 5.7 53 39-95 8-64 (89)
83 1iqt_A AUF1, heterogeneous nuc 44.7 38 0.0013 22.0 4.8 41 60-100 13-62 (75)
84 2mss_A Protein (musashi1); RNA 42.4 54 0.0018 21.2 5.3 41 60-100 13-62 (75)
85 3beg_B Splicing factor, argini 38.2 1.1E+02 0.0038 22.0 7.4 59 44-106 18-79 (115)
86 2jwa_A Receptor tyrosine-prote 38.0 60 0.0021 19.0 4.1 6 25-30 33-38 (44)
87 2knc_A Integrin alpha-IIB; tra 37.8 53 0.0018 20.2 3.9 6 25-30 31-36 (54)
88 2wbr_A GW182, gawky, LD47780P; 37.1 1E+02 0.0035 21.3 6.5 50 44-97 9-61 (89)
89 4f25_A Polyadenylate-binding p 35.9 99 0.0034 22.3 6.3 50 45-98 8-64 (115)
90 1x4c_A Splicing factor, argini 34.2 1.2E+02 0.0042 21.4 7.3 51 44-98 17-69 (108)
91 2nlw_A Eukaryotic translation 31.1 1.4E+02 0.0047 21.0 7.1 53 44-98 17-80 (105)
92 1x4e_A RNA binding motif, sing 30.3 1.1E+02 0.0039 20.2 5.5 50 44-97 7-65 (85)
93 3s8s_A Histone-lysine N-methyl 30.2 1.4E+02 0.0047 21.4 6.1 51 44-98 8-67 (110)
94 2hvz_A Splicing factor, argini 30.2 1.4E+02 0.0047 20.7 6.3 47 60-106 14-65 (101)
95 1m46_B IQ4, IQ4 motif from MYO 29.8 43 0.0015 16.0 2.0 12 342-353 8-19 (26)
96 1p27_B RNA-binding protein 8A; 29.6 1.4E+02 0.0049 20.8 6.9 50 45-98 26-84 (106)
97 2la6_A RNA-binding protein FUS 29.4 1.4E+02 0.0048 20.6 7.1 55 39-97 10-81 (99)
98 4fxv_A ELAV-like protein 1; RN 29.0 1.5E+02 0.005 20.7 6.0 49 46-98 23-80 (99)
99 2dnh_A Bruno-like 5, RNA bindi 28.7 1.3E+02 0.0045 21.0 5.8 51 44-98 17-75 (105)
100 1sjq_A Polypyrimidine tract-bi 27.9 1.7E+02 0.0057 20.9 6.9 51 43-97 17-70 (105)
101 2cpf_A RNA binding motif prote 27.9 1.5E+02 0.005 20.3 6.0 51 44-98 7-69 (98)
102 1sjr_A Polypyrimidine tract-bi 27.7 2.1E+02 0.0073 22.5 7.1 49 46-98 50-103 (164)
103 2dnm_A SRP46 splicing factor; 27.7 1.2E+02 0.0042 21.1 5.5 56 44-103 15-80 (103)
104 2cqc_A Arginine/serine-rich sp 27.3 1.5E+02 0.005 20.1 6.9 56 39-98 12-76 (95)
105 2kvi_A Nuclear polyadenylated 27.2 1.5E+02 0.0052 20.3 6.8 51 44-98 12-64 (96)
106 2cqi_A Nucleolysin TIAR; RNA r 27.0 1.6E+02 0.0054 20.4 6.5 50 44-97 17-73 (103)
107 1whx_A Hypothetical protein ri 27.0 1.7E+02 0.0058 20.8 6.2 57 46-106 14-74 (111)
108 3s7r_A Heterogeneous nuclear r 26.7 1.4E+02 0.0048 19.8 5.5 52 44-99 13-73 (87)
109 2l8s_A Integrin alpha-1; trans 26.7 1.1E+02 0.0037 18.8 3.9 7 24-30 27-33 (54)
110 1oo0_B CG8781-PA, drosophila Y 26.6 1.7E+02 0.0058 20.6 6.6 50 45-98 29-87 (110)
111 2jwn_A Embryonic polyadenylate 26.4 1.2E+02 0.004 22.1 5.3 41 60-100 50-99 (124)
112 2ywk_A Putative RNA-binding pr 25.7 1.6E+02 0.0054 20.0 5.9 50 44-97 18-75 (95)
113 2dgx_A KIAA0430 protein; RRM d 25.4 1.7E+02 0.0057 20.1 6.5 50 44-97 11-70 (96)
114 1x4d_A Matrin 3; structural ge 25.3 1.8E+02 0.0061 20.6 5.8 55 39-97 12-70 (102)
115 2dnz_A Probable RNA-binding pr 25.0 1.6E+02 0.0056 19.9 7.6 58 44-105 7-74 (95)
116 2dgu_A Heterogeneous nuclear r 24.8 1.8E+02 0.0061 20.2 6.5 51 44-98 13-64 (103)
117 2dhg_A TRNA selenocysteine ass 24.6 1.8E+02 0.0061 20.2 7.5 56 39-98 6-70 (104)
118 2kxn_B Transformer-2 protein h 24.3 2.2E+02 0.0074 21.0 9.1 52 43-98 47-107 (129)
119 1whw_A Hypothetical protein ri 24.0 1.8E+02 0.0061 19.9 6.4 51 44-98 10-69 (99)
120 1x4g_A Nucleolysin TIAR; struc 23.6 1.9E+02 0.0067 20.3 6.8 51 44-98 27-80 (109)
121 3ex7_B RNA-binding protein 8A; 23.5 2.1E+02 0.0073 20.7 6.5 57 44-104 24-90 (126)
122 2cq4_A RNA binding motif prote 23.2 1.3E+02 0.0044 21.5 4.9 50 46-99 29-87 (114)
123 2a3j_A U1 small nuclear ribonu 22.9 1.7E+02 0.0058 21.7 5.6 55 44-98 31-91 (127)
124 2rs2_A Musashi-1, RNA-binding 22.7 1.9E+02 0.0063 20.5 5.6 52 44-99 27-87 (109)
125 1x5p_A Negative elongation fac 22.6 1.9E+02 0.0065 19.8 7.2 50 43-98 16-68 (97)
126 2dgv_A HnRNP M, heterogeneous 22.2 1.8E+02 0.0063 19.5 7.4 51 44-98 10-67 (92)
127 2ad9_A Polypyrimidine tract-bi 22.0 2.4E+02 0.0081 20.7 6.3 52 42-97 31-85 (119)
128 2bz2_A Negative elongation fac 21.9 1.8E+02 0.0062 21.2 5.5 49 44-98 41-92 (121)
129 2dgs_A DAZ-associated protein 21.9 2E+02 0.0068 19.7 7.8 57 44-104 12-77 (99)
130 3ucg_A Polyadenylate-binding p 21.5 1.9E+02 0.0064 19.2 5.8 41 60-100 20-69 (89)
131 2cq3_A RNA-binding protein 9; 21.4 2.1E+02 0.0071 19.8 7.5 52 43-98 16-74 (103)
132 1p1t_A Cleavage stimulation fa 21.4 2.1E+02 0.0071 19.8 5.8 49 46-98 12-69 (104)
133 2jvo_A Nucleolar protein 3; nu 21.4 2.1E+02 0.0071 20.2 5.7 49 46-98 35-84 (108)
134 2d9o_A DNAJ (HSP40) homolog, s 21.2 2.2E+02 0.0075 20.0 6.5 40 59-98 30-73 (100)
135 1u6f_A Tcubp1, RNA-binding pro 21.0 2.3E+02 0.0079 21.0 6.2 49 46-98 46-103 (139)
136 2e5h_A Zinc finger CCHC-type a 20.9 2E+02 0.0068 19.4 6.8 51 43-97 17-76 (94)
137 3zzy_A Polypyrimidine tract-bi 20.9 1.9E+02 0.0065 21.7 5.4 50 44-97 30-84 (130)
138 2cpi_A CCR4-NOT transcription 20.8 91 0.0031 22.3 3.6 56 44-103 17-88 (111)
139 3md1_A Nuclear and cytoplasmic 20.4 1.9E+02 0.0064 18.9 5.8 39 60-98 15-62 (83)
140 3bs9_A Nucleolysin TIA-1 isofo 20.3 1.9E+02 0.0067 19.0 5.7 50 45-98 9-67 (87)
141 2jrs_A RNA-binding protein 39; 20.2 2.4E+02 0.008 19.9 7.5 50 44-97 28-86 (108)
142 2fy1_A RNA-binding motif prote 20.1 1.9E+02 0.0066 20.7 5.3 56 45-104 10-74 (116)
No 1
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=8.8e-79 Score=605.80 Aligned_cols=465 Identities=24% Similarity=0.366 Sum_probs=357.8
Q ss_pred cCCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc
Q 009899 31 SNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT 110 (523)
Q Consensus 31 ~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~ 110 (523)
..+..+.||||+++|++||++.+.. ++++..+.+|+++|||||++++|+.++|+|+||+++++||.+++..|++++...
T Consensus 5 ~ss~~kLPPGP~~lP~iGn~~~~~~-~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~ 83 (479)
T 3tbg_A 5 TSSKGKLPPGPLPLPGLGNLLHVDF-QNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVP 83 (479)
T ss_dssp ----CCCCCCSCCBTTTBTGGGCCT-TSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCG
T ss_pred CCCCCCCCCCCCCcCcccchHhhcC-CCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchH
Confidence 3344478999999999999998865 677889999999999999999999999999999999999998888888888766
Q ss_pred ccccccCC--CcceeeCCCChhHHHHHHhHHHhcCCHHHHH--HcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHH
Q 009899 111 VGKLLGHN--YANFGFSPYNAYWREMRKITASELLSNRRLE--LLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKK 186 (523)
Q Consensus 111 ~~~~~~~~--~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~ 186 (523)
.....+.+ ..++++..+|+.|+++|+.+. +.|+...+. .++..+......+...+... . ++ .+|+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~--~~-~~~~~~ 154 (479)
T 3tbg_A 84 ITQILGFGPRSQGVFLARYGPAWREQRRFSV-STLRNLGLGKKSLEQWVTEEAACLCAAFANH-----S--GR-PFRPNG 154 (479)
T ss_dssp GGGGGTCBTTBCCSTTCCSSHHHHHHHHHHH-HHHHHTTSTTCHHHHHHHHHHHHHHHHHHTT-----T--TC-CBCTHH
T ss_pred HHHHhccCCCCCceeeCCCCHHHHHHHHHHH-HHhcchhhhHHHHHHHHHHHHHHHHHHHHhc-----c--CC-cccHHH
Confidence 55544432 234567778999999999988 566554443 23444444544444444332 1 44 799999
Q ss_pred HHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccc--cccccccccccccccccHHHHHHHHHHHHH
Q 009899 187 WFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVF--LVRDALPFLGWLDIGGYEKAMKKTAKELDS 264 (523)
Q Consensus 187 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~ 264 (523)
++..+++++++.++||..+ +.. +.. ...+.............. ......|++..+ .....+.....+...+
T Consensus 155 ~~~~~~~~~~~~~~fg~~~-~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 227 (479)
T 3tbg_A 155 LLDKAVSNVIASLTCGRRF-EYD---DPR-FLRLLDLAQEGLKEESGFLREVLNAVPVLLHI--PALAGKVLRFQKAFLT 227 (479)
T ss_dssp HHHHHHHHHHHHHHHSCCC-CTT---CHH-HHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS--HHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCcc-ccc---chh-hhhhhhhhhhhhhhhhhhhhhhhcccchhccc--hhhHHHHHHHHHHHHH
Confidence 9999999999999999998 542 222 123333333333222211 111223333322 2223444555666677
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHH
Q 009899 265 LIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRE 343 (523)
Q Consensus 265 ~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~ 343 (523)
.+.+.++...+..+... ...|.++.++........+ ....+ ++++.+++.++++||+|||+.+++|++++|++||++
T Consensus 228 ~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~-~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~ 305 (479)
T 3tbg_A 228 QLDELLTEHRMTWDPAQ-PPRDLTEAFLAEMEKAKGN-PESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDV 305 (479)
T ss_dssp HHHHHHHHHHHHCCTTS-CCCSHHHHHHHHHHHTTTC-TTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHhhhccc-ccchhhhhhhhhhhhcccC-CccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHH
Confidence 77777777666544332 5567777776654332111 23456 889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCC
Q 009899 344 LEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPR 423 (523)
Q Consensus 344 ~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~ 423 (523)
|+|||+|++.+++.++.++.+++.+||||+|||+||||++|++|...+|.+.+|++++||.||+||.|+++.+++|+||+
T Consensus 306 q~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~ 385 (479)
T 3tbg_A 306 QRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEA 385 (479)
T ss_dssp HHHHHHHHHHHTCSSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTT
T ss_pred HHHHHHHHHHHHhhccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChh
Confidence 99999999999988889999999999999999999999999999987778889999999999999999999999999999
Q ss_pred CCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcc-cccCcCCCcc
Q 009899 424 VWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAW-VDMTGTAGLT 502 (523)
Q Consensus 424 ~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~~~~~~ 502 (523)
+|+||++|+||||+++++. ...+..|+|||+|+|.|+|++||++|+++++|.||++|||+++++.+ +......+++
T Consensus 386 ~~~dP~~F~PeRfl~~~~~---~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~ 462 (479)
T 3tbg_A 386 VWEKPFRFHPEHFLDAQGH---FVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFL 462 (479)
T ss_dssp TSSSTTSCCGGGGBCTTCC---BCCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSS
T ss_pred hCCCccccCccccCCCCcc---cCCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceee
Confidence 9999999999999987632 23567899999999999999999999999999999999999988743 3344456677
Q ss_pred cccCCCceEEeeccCC
Q 009899 503 NIRATPLEILLKPRLP 518 (523)
Q Consensus 503 ~~~~~~~~v~~~~r~~ 518 (523)
..| ++++|+++||++
T Consensus 463 ~~P-~~~~v~~~pRs~ 477 (479)
T 3tbg_A 463 VSP-SPYELCAVPRHH 477 (479)
T ss_dssp EEE-CCCCBEEEEC--
T ss_pred ecC-CCeEEEEEECCC
Confidence 765 699999999986
No 2
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=2.5e-78 Score=604.06 Aligned_cols=466 Identities=26% Similarity=0.391 Sum_probs=374.6
Q ss_pred CCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcccc
Q 009899 33 TGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVG 112 (523)
Q Consensus 33 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~ 112 (523)
+..+.||||+++|++||++.+...+.++..+.+|+++||+||++++|+.++|+|+||+++++++.++...|++++.....
T Consensus 5 ~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~ 84 (494)
T 3swz_A 5 TGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATL 84 (494)
T ss_dssp -------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHH
T ss_pred CCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence 34568999999999999998864245688999999999999999999999999999999999999988889888876655
Q ss_pred ccccCCCcceeeCCCChhHHHHHHhHHHhcCCH--HHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHH
Q 009899 113 KLLGHNYANFGFSPYNAYWREMRKITASELLSN--RRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGD 190 (523)
Q Consensus 113 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~--~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~ 190 (523)
...+.++.++++..+|+.|+++|+++. +.|+. ..+..+++.+.++++.+++.+... . ++ ++|+..++..
T Consensus 85 ~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~--~~-~vd~~~~~~~ 155 (494)
T 3swz_A 85 DIASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLATH-----N--GQ-SIDISFPVFV 155 (494)
T ss_dssp HHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHHT-----T--TE-EECCHHHHHH
T ss_pred HHhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHHc-----C--CC-cccHHHHHHH
Confidence 555555556667777999999999998 66753 345678899999999998888653 2 44 8999999999
Q ss_pred HHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Q 009899 191 LNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWI 270 (523)
Q Consensus 191 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i 270 (523)
+++|+|+.++||.++ +. .++. ...+....+.+........+.+++|++.+++. ...+...+..+.+.+++.+.+
T Consensus 156 ~t~dvi~~~~fG~~~-~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~-~~~~~~~~~~~~~~~~~~~~i 229 (494)
T 3swz_A 156 AVTNVISLICFNTSY-KN---GDPE-LNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN-KTLEKLKSHVKIRNDLLNKIL 229 (494)
T ss_dssp HHHHHHHHHHHSCCC-CT---TCTH-HHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC-SHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcC-CC---CCHH-HHHHHHHHHHHHHhcccchHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988 44 2222 12333333333333333445667888877642 335667777788888888888
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHhhhcCCC-----CCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHH
Q 009899 271 EEHRRKKESGANLDLDFIDVLLSVLEGEGVD-----LSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRREL 344 (523)
Q Consensus 271 ~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~-----~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~ 344 (523)
+++++....+ ...|+++.|++...+.... ..+..+ ++++..++.++++||+|||+++++|++++|++||++|
T Consensus 230 ~~~~~~~~~~--~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q 307 (494)
T 3swz_A 230 ENYKEKFRSD--SITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVK 307 (494)
T ss_dssp HHHTTTCCTT--CCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHhhccc--chhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHH
Confidence 8877654333 4579999999875432110 112346 8899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCC
Q 009899 345 EKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRV 424 (523)
Q Consensus 345 ~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~ 424 (523)
+||++||+++++.++.++++++.+||||+|||+||||++|++|..++|.+++|++++||.||+||.|+++.+++|+||++
T Consensus 308 ~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~ 387 (494)
T 3swz_A 308 KKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKE 387 (494)
T ss_dssp HHHHHHHHHHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTT
T ss_pred HHHHHHHHHhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCccc
Confidence 99999999999988889999999999999999999999999998779999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcc-cccCcCCCccc
Q 009899 425 WSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAW-VDMTGTAGLTN 503 (523)
Q Consensus 425 ~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~~~~~~~ 503 (523)
|+||++|+||||+++++.. ....+..++|||.|+|.|+|++||++|++++++.|+++|+|+++++.. +......+++.
T Consensus 388 ~~dp~~F~PeRfl~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~ 466 (494)
T 3swz_A 388 WHQPDQFMPERFLNPAGTQ-LISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVF 466 (494)
T ss_dssp SSSTTSCCGGGGBCTTSSS-BCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSE
T ss_pred CCCcccCCcccccCCCCcc-ccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceee
Confidence 9999999999999865321 112456899999999999999999999999999999999999877533 33444455665
Q ss_pred ccCCCceEEeeccC
Q 009899 504 IRATPLEILLKPRL 517 (523)
Q Consensus 504 ~~~~~~~v~~~~r~ 517 (523)
. +.+++|+++||+
T Consensus 467 ~-p~~~~v~~~~R~ 479 (494)
T 3swz_A 467 L-IDSFKVKIKVRQ 479 (494)
T ss_dssp E-CCCCCEEEEECH
T ss_pred c-CCCcEEEEEEcC
Confidence 5 579999999994
No 3
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-78 Score=608.33 Aligned_cols=471 Identities=23% Similarity=0.372 Sum_probs=358.7
Q ss_pred CCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 009899 32 NTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTV 111 (523)
Q Consensus 32 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~ 111 (523)
+++.+.||||+++|++||++.+. ++++..+.+++++||+||++++|+.++++|+||+++++|+.++...|++++....
T Consensus 5 ~~~~~~pPgP~~~P~iG~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~ 82 (507)
T 3pm0_A 5 TSSKGKPPGPFAWPLIGNAAAVG--QAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFAS 82 (507)
T ss_dssp -------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHH
T ss_pred cCCCCCCcCCCCCCeeCchhhcC--ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchH
Confidence 34567899999999999999887 7789999999999999999999999999999999999999887777887776544
Q ss_pred cccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHH------HHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHH
Q 009899 112 GKLLGHNYANFGFSPYNAYWREMRKITASELLSNRR------LELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMK 185 (523)
Q Consensus 112 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~------l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~ 185 (523)
..... ++.+++++.+|+.|+++|+++. +.|+... .+.+++.+.+.++.+++.+... ..+ ++ ++|+.
T Consensus 83 ~~~~~-~g~~l~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~--~~-~vd~~ 154 (507)
T 3pm0_A 83 FRVVS-GGRSMAFGHYSEHWKVQRRAAH-SMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRG---SAD--GA-FLDPR 154 (507)
T ss_dssp HHHGG-GGTCSSSSCSSHHHHHHHHHHH-HHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHT---TGG--GC-CBCCH
T ss_pred HHhhc-CCCceEECCCChHHHHHHHHHH-HHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhh---ccc--CC-CcChH
Confidence 33332 2234556677999999999997 4443222 3448899999999999999874 333 55 89999
Q ss_pred HHHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccccccccccccccccccc--ccHHHHHHHHHHHH
Q 009899 186 KWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIG--GYEKAMKKTAKELD 263 (523)
Q Consensus 186 ~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~--~~~~~~~~~~~~l~ 263 (523)
+++..+++|+++.++||.++ +. .+.. ...+...+..+........+...+|++.+++.. ...++..+..+.+.
T Consensus 155 ~~~~~~~~dvi~~~~fG~~~-~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~ 229 (507)
T 3pm0_A 155 PLTVVAVANVMSAVCFGCRY-SH---DDPE-FRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFS 229 (507)
T ss_dssp HHHHHHHHHHHHHHHTSCCC-CT---TCHH-HHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccccC-CC---CCHH-HHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 99999999999999999998 54 2222 234444444444433333445667877766322 13566777788889
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCC---CCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhc
Q 009899 264 SLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDL---SDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLN 339 (523)
Q Consensus 264 ~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~---~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~ 339 (523)
+++.+.++++++..+.+. ...|+++.|++..+...... .+..+ ++++.+++..+++||+|||+.+++|++++|++
T Consensus 230 ~~~~~~i~~~~~~~~~~~-~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~ 308 (507)
T 3pm0_A 230 NFILDKFLRHCESLRPGA-APRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTR 308 (507)
T ss_dssp HHHHHHHHHHHHHCCTTC-CCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccc-CCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHh
Confidence 999999998887654422 56799999997644221000 11235 78899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccc
Q 009899 340 NRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQ 419 (523)
Q Consensus 340 ~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~ 419 (523)
||++|++|++||+++++.++.++++++.+||||+|||+||||++|++|..++|.+.+|++++||.||+|+.|.++.+++|
T Consensus 309 ~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~ 388 (507)
T 3pm0_A 309 YPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVN 388 (507)
T ss_dssp CHHHHHHHHHHHHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHh
Confidence 99999999999999998888899999999999999999999999999987799999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCC
Q 009899 420 TDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTA 499 (523)
Q Consensus 420 ~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 499 (523)
+||++|+||++|+||||+++++... ...+..++|||+|+|.|+|++||.+|++++++.|+++|+|++.++.++++....
T Consensus 389 ~d~~~~~dp~~F~PeRfl~~~~~~~-~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~ 467 (507)
T 3pm0_A 389 HDPLKWPNPENFDPARFLDKDGLIN-KDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSY 467 (507)
T ss_dssp SCTTTCSSSSSCCGGGGBCTTSCBC-HHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEEE
T ss_pred CCcccCCCcCccCCCcccCCCCccc-CCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCCC
Confidence 9999999999999999998653211 112357999999999999999999999999999999999999876545554455
Q ss_pred CcccccCCCceEEeeccCCCC
Q 009899 500 GLTNIRATPLEILLKPRLPSS 520 (523)
Q Consensus 500 ~~~~~~~~~~~v~~~~r~~~~ 520 (523)
+++..| ++++|++++|+...
T Consensus 468 ~~~~~p-~~~~v~~~~R~~~~ 487 (507)
T 3pm0_A 468 GLTIKP-KSFKVNVTLRESME 487 (507)
T ss_dssp SSSEEE-CSCCEEEEESSCCS
T ss_pred CccccC-CCcEEEEEEccccc
Confidence 666655 57899999997643
No 4
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=2.3e-78 Score=603.39 Aligned_cols=457 Identities=20% Similarity=0.328 Sum_probs=356.2
Q ss_pred CCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhc-ccccCCCCCcccc
Q 009899 34 GKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKH-DVDISSRPKLTVG 112 (523)
Q Consensus 34 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~-~~~~~~~~~~~~~ 112 (523)
+++.||||+++|++||++.+. +.++.++.+|+++||+||++++|+.++|+|+||+++++|+.++ ...|.+++.....
T Consensus 12 k~~~~PGP~~~PliGn~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~ 89 (485)
T 3nxu_A 12 KKLGIPGPTPLPFLGNILSYH--KGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPV 89 (485)
T ss_dssp HHHTCCCCCCBTTTBTGGGGG--GCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCC
T ss_pred hhCCCCCCCCcCeecCcHHhh--cChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccc
Confidence 345799999999999999987 6778899999999999999999999999999999999999876 4556666544332
Q ss_pred ccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHH
Q 009899 113 KLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLN 192 (523)
Q Consensus 113 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~ 192 (523)
...+ ..++..+|+.|+++|+++. +.|+.++++.+.+.+.+.++.+++.+.+. ... ++ ++|+.+++..++
T Consensus 90 ~~~~----~~l~~~~g~~w~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~---~~~--g~-~~d~~~~~~~~~ 158 (485)
T 3nxu_A 90 GFMK----SAISIAEDEEWKRLRSLLS-PTFTSGKLKEMVPIIAQYGDVLVRNLRRE---AET--GK-PVTLKDVFGAYS 158 (485)
T ss_dssp GGGG----GSTTTCCHHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHH---HHH--TC-CEEHHHHHHHHH
T ss_pred cccc----cCccccCCcHHHHHHhhcC-hhcCHHHHHHHHHHHHHHHHHHHHHHHHH---hcc--CC-cCcHHHHHHHHH
Confidence 2222 2245567999999999998 89999999999999999999999999764 323 55 899999999999
Q ss_pred HHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccc---ccccccccccccc----cccccHHHHHHHHHHHHHH
Q 009899 193 LNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGV---FLVRDALPFLGWL----DIGGYEKAMKKTAKELDSL 265 (523)
Q Consensus 193 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~P~l~~~----~~~~~~~~~~~~~~~l~~~ 265 (523)
+|+|+.++||.++ +...+.+ ..+...+......... ......+|++.++ ...... ....+.+.++
T Consensus 159 ~dvi~~~~fG~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~---~~~~~~~~~~ 230 (485)
T 3nxu_A 159 MDVITSTSFGVNI-DSLNNPQ----DPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFP---REVTNFLRKS 230 (485)
T ss_dssp HHHHHHHHHSCCC-CGGGCTT----CHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSC---HHHHHHHHHH
T ss_pred HHHHHHHHcCCcc-ccccCCC----cHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhch---HHHHHHHHHH
Confidence 9999999999998 5532122 2333333332221100 0111233433221 111111 1233444555
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHH
Q 009899 266 IEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRREL 344 (523)
Q Consensus 266 ~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~ 344 (523)
+++.++++.+.. .....|+++.|++...+.. ...+..+ ++++.+++..+++||+|||+.+++|++++|++||++|
T Consensus 231 ~~~~~~~~~~~~---~~~~~d~l~~ll~~~~~~~-~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~ 306 (485)
T 3nxu_A 231 VKRMKESRLEDT---QKHRVDFLQLMIDSQNSKE-TESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQ 306 (485)
T ss_dssp HHHHHHHHHHCC------CCCHHHHHHHHHC---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHhcc---CCCcccHHHHHHHhhhccc-cccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHH
Confidence 555555443221 1255799999998754321 1112346 8899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCC
Q 009899 345 EKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRV 424 (523)
Q Consensus 345 ~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~ 424 (523)
++|++|++++++.++.++++++.+||||+|||+||||++|+++. ++|.+++|++++||.||+||.|.++.+++||||++
T Consensus 307 ~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~ 385 (485)
T 3nxu_A 307 QKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMR-LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKY 385 (485)
T ss_dssp HHHHHHHHHHSTTTCCCCHHHHHHCHHHHHHHHHHHHHSCSCSC-EEEECCSCEEETTEEECTTCEEEECHHHHHTCTTT
T ss_pred HHHHHHHHHHhccCCCCCHHHHhcChHHHHHHHHHHhcCCCccC-cceeeCCCeeECCEEECCCCEEEEchHHhcCChhh
Confidence 99999999999888889999999999999999999999999997 59999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccc
Q 009899 425 WSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNI 504 (523)
Q Consensus 425 ~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 504 (523)
|+||++|+||||+++++. ...+..++|||.|+|.|+|++||++|++++++.|+++|+|++.++.+.++....+.+..
T Consensus 386 ~~dp~~F~PeR~l~~~~~---~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~ 462 (485)
T 3nxu_A 386 WTEPEKFLPERFSKKNKD---NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQ 462 (485)
T ss_dssp CSSTTSCCGGGGSHHHHT---TSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCC
T ss_pred cCCccCcCccccCCCccc---cCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeecc
Confidence 999999999999975421 12456799999999999999999999999999999999999887654444445566778
Q ss_pred cCCCceEEeeccCCC
Q 009899 505 RATPLEILLKPRLPS 519 (523)
Q Consensus 505 ~~~~~~v~~~~r~~~ 519 (523)
|+++++|++++|+..
T Consensus 463 p~~~~~~~~~~r~~~ 477 (485)
T 3nxu_A 463 PEKPVVLKVESRDGT 477 (485)
T ss_dssp BSSCCEEEEEEC---
T ss_pred CCCCeEEEEEEccCC
Confidence 889999999999653
No 5
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=3.2e-77 Score=595.05 Aligned_cols=458 Identities=21% Similarity=0.319 Sum_probs=368.2
Q ss_pred HhhcCCCCCCCCCCCCCccccccccccC---CCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccC
Q 009899 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAG---PQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDIS 104 (523)
Q Consensus 28 ~~~~~~~~~~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~ 104 (523)
++...++++.+|||+++|++||++.+.. .++++..+.+++++||+||++++|+.++|+|+||+++++|+.++ ..|.
T Consensus 16 ~~~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~ 94 (482)
T 3k9v_A 16 TDGETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHP 94 (482)
T ss_dssp ---CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSC
T ss_pred cccccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCC
Confidence 5566788999999999999999988742 14578899999999999999999999999999999999999875 4566
Q ss_pred CCCCccc---cccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhccccccccc
Q 009899 105 SRPKLTV---GKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQIL 181 (523)
Q Consensus 105 ~~~~~~~---~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 181 (523)
+++.... .......+.+ ++..+|+.|+++||.+.+.+++.+.++.+++.+.+.++.+++.+.+. ... +|+ +
T Consensus 95 ~r~~~~~~~~~~~~~~~~~~-l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~-~g~-~ 168 (482)
T 3k9v_A 95 QRLEIKPWKAYRDHRNEAYG-LMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDEL---CDE-RGR-I 168 (482)
T ss_dssp CCCCCHHHHHHHHHHTCCCC-TTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHH---CCT-TSC-C
T ss_pred CCCCchHHHHHHHhcCCCCC-ceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHH---Hhc-CCC-C
Confidence 6664321 1111112223 45567999999999998556689999999999999999999999875 321 155 7
Q ss_pred chHHHHHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccccccccccc--ccccccccccHHHHHHHH
Q 009899 182 LEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALP--FLGWLDIGGYEKAMKKTA 259 (523)
Q Consensus 182 vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P--~l~~~~~~~~~~~~~~~~ 259 (523)
+|+.+++..+++|+|+.++||.++ +...+........+...+..++...... ..+| ++.++ .....++..+..
T Consensus 169 vd~~~~~~~~t~dvi~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~~~~l-~~~~~~~~~~~~ 243 (482)
T 3k9v_A 169 PDLYSELNKWSFESICLVLYEKRF-GLLQKETEEEALTFITAIKTMMSTFGKM---MVTPVELHKRL-NTKVWQAHTLAW 243 (482)
T ss_dssp TTHHHHHHHHHHHHHHHHHHSCCC-CSSSTTSTTSSHHHHHHHHHHHTTGGGG---SSSCHHHHHHH-TCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHccccc-CCCCCCcchHHHHHHHHHHHHHHHHHHH---HhhhHHHHHhc-CCHHHHHHHHHH
Confidence 999999999999999999999998 5532111111245666666655433321 2233 22222 122345566667
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHh
Q 009899 260 KELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLL 338 (523)
Q Consensus 260 ~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~ 338 (523)
+.+.+++.+.+++++++.+.+ ...|++..++... .+ ++++.+++.++++||+|||+.+++|++++|+
T Consensus 244 ~~~~~~~~~~i~~r~~~~~~~--~~~d~l~~ll~~~----------~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~ 311 (482)
T 3k9v_A 244 DTIFKSVKPCIDNRLQRYSQQ--PGADFLCDIYQQD----------HLSKKELYAAVTELQLAAVETTANSLMWILYNLS 311 (482)
T ss_dssp HHHHHHHHHHHHHHHHHTTTC--TTSCHHHHHHHHT----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccC--CchHHHHHHHhcc----------CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 778888888888887654332 4468888887642 23 7889999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEccccc
Q 009899 339 NNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKL 418 (523)
Q Consensus 339 ~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~ 418 (523)
+||++|+||++||+++++.++.++++++.+||||+|||+||||++|++|. ++|.+++|++++||.||+||.|.++.+++
T Consensus 312 ~~P~~q~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~ 390 (482)
T 3k9v_A 312 RNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPF-TTRTLDKPTVLGEYALPKGTVLTLNTQVL 390 (482)
T ss_dssp TCHHHHHHHHHHHHHHSCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCE-EEEECSSCEEETTEEECTTCEEEEECSGG
T ss_pred hCHHHHHHHHHHHHHHhCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcC-cccccCCceeeCCEEECCCCEEEEccccc
Confidence 99999999999999999888889999999999999999999999999997 59999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcC
Q 009899 419 QTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGT 498 (523)
Q Consensus 419 ~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 498 (523)
|+||++|+||++|+||||++.++ ...+..++|||.|+|.|+|++||++|++++++.|+++|++++.++.++++ .
T Consensus 391 ~~d~~~~~~p~~F~PeRfl~~~~----~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~--~ 464 (482)
T 3k9v_A 391 GSSEDNFEDSHKFRPERWLQKEK----KINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEM--L 464 (482)
T ss_dssp GGCTTTCSSTTSCCGGGGTCTTS----CCCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCCCCE--E
T ss_pred cCCCccCCCcCccCccccCCCCC----CCCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCCccc--c
Confidence 99999999999999999997653 13567899999999999999999999999999999999999877654433 3
Q ss_pred CCcccccCCCceEEeecc
Q 009899 499 AGLTNIRATPLEILLKPR 516 (523)
Q Consensus 499 ~~~~~~~~~~~~v~~~~r 516 (523)
.+.+..|+.+++|++++|
T Consensus 465 ~~~~~~p~~~~~~~~~~R 482 (482)
T 3k9v_A 465 HLGILVPSRELPIAFRPR 482 (482)
T ss_dssp ESSSEEESSSCCEEEEEC
T ss_pred cceeecCCCCcceEEeeC
Confidence 456778899999999987
No 6
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.1e-77 Score=593.22 Aligned_cols=469 Identities=26% Similarity=0.386 Sum_probs=368.9
Q ss_pred HhhcCCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCC
Q 009899 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRP 107 (523)
Q Consensus 28 ~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~ 107 (523)
.++..++.+.+|||+++|++||++.+. ++++..+.+++++|||||++++|+.++++|+||+++++|+.++...|++++
T Consensus 8 ~~~~~~~lp~~PgP~~~p~~G~~~~~~--~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~ 85 (495)
T 2hi4_A 8 RPRVPKGLKSPPEPWGWPLLGHVLTLG--KNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRP 85 (495)
T ss_dssp --CCCTTCBCCCCCCCBTTTBTHHHHT--TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCC
T ss_pred cccCCCCCCCCCCCCCCcceeeHHhcC--ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCC
Confidence 333444555669999999999998886 667889999999999999999999999999999999999988766677666
Q ss_pred CccccccccCCCcceeeC-CCChhHHHHHHhHHHhcC---CHHHH---H---HcHHHHHHHHHHHHHHHHHHhhhccccc
Q 009899 108 KLTVGKLLGHNYANFGFS-PYNAYWREMRKITASELL---SNRRL---E---LLKHIRATEVDGEIKEIYKIWTKKKNES 177 (523)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~-~~g~~w~~~R~~~~~~~f---s~~~l---~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 177 (523)
......... ++.+++++ .+|+.|+++|+++. +.| +..+. . .+++.+.+.++.+++.+.+. ...
T Consensus 86 ~~~~~~~~~-~~~~l~~~~~~g~~w~~~Rr~~~-~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~-- 158 (495)
T 2hi4_A 86 DLYTSTLIT-DGQSLTFSTDSGPVWAARRRLAQ-NALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQEL---MAG-- 158 (495)
T ss_dssp CCHHHHTST-TSCCTTTSSCCSHHHHHHHHHHH-HHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHH---HHT--
T ss_pred CcHHHHHhc-CCCCEEEcCCCChHHHHHHHHHH-HHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHh---ccC--
Confidence 543222222 22344454 46999999999998 553 33222 1 68899999999999999774 222
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHH
Q 009899 178 DQILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKK 257 (523)
Q Consensus 178 ~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~ 257 (523)
++ ++|+.+++..+++|+|+.++||.++ +. .+.+ ...+.+.+..+............+|++.+++. ...++..+
T Consensus 159 ~~-~~d~~~~~~~~~~dvi~~~~fG~~~-~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~ 231 (495)
T 2hi4_A 159 PG-HFDPYNQVVVSVANVIGAMCFGQHF-PE---SSDE-MLSLVKNTHEFVETASSGNPLDFFPILRYLPN-PALQRFKA 231 (495)
T ss_dssp TS-CBCHHHHHHHHHHHHHHHHHHGGGS-CT---TCHH-HHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCC-HHHHHHHH
T ss_pred CC-ccchHHHHHHHHHHHHHHHHcCCCC-CC---CCHH-HHHHHHHHHHHHHhcccchHHHHhHHHHhcCc-hHHHHHHH
Confidence 44 7999999999999999999999988 43 2222 23444444555443333233456777765532 23456677
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHH
Q 009899 258 TAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSL 336 (523)
Q Consensus 258 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~ 336 (523)
+.+.+.+++.+.|+++++..+.+ ...|+++.|++...+.. ...+..+ ++++.+++.++++||+|||+.+++|++++
T Consensus 232 ~~~~~~~~~~~~i~~r~~~~~~~--~~~d~l~~ll~~~~~~~-~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~ 308 (495)
T 2hi4_A 232 FNQRFLWFLQKTVQEHYQDFDKN--SVRDITGALFKHSKKGP-RASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMY 308 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTT--CCCSHHHHHHHHHHHCC-EETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhccc--ccccHHHHHHHHhhhcc-CccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 78889999999999887653332 45799999997543210 0012245 78899999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEccc
Q 009899 337 LLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLW 416 (523)
Q Consensus 337 L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~ 416 (523)
|++||++|++|++||+++++.++.++++++.+||||+|||+||||++|++|..++|.+++|++++||.||+|+.|.++.+
T Consensus 309 L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~ 388 (495)
T 2hi4_A 309 LVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQW 388 (495)
T ss_dssp HHHCHHHHHHHHHHHHHHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHH
T ss_pred HhhCHHHHHHHHHHHHHhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChH
Confidence 99999999999999999998777899999999999999999999999999976799999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccC
Q 009899 417 KLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMT 496 (523)
Q Consensus 417 ~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 496 (523)
++||||++|+||++|+||||+++++.......+..++|||.|+|.|+|++||++|++++++.|+++|++++.++..+++.
T Consensus 389 ~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~ 468 (495)
T 2hi4_A 389 QVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLT 468 (495)
T ss_dssp HHHHCTTTCSSTTSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCC
T ss_pred HhhCCcccCCCcCccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCcc
Confidence 99999999999999999999975431000013567999999999999999999999999999999999998776444454
Q ss_pred cCCCcccccCCCc-eEEeeccC
Q 009899 497 GTAGLTNIRATPL-EILLKPRL 517 (523)
Q Consensus 497 ~~~~~~~~~~~~~-~v~~~~r~ 517 (523)
...+++..| .++ +|+++ |.
T Consensus 469 ~~~~~~~~p-~~~~~v~~~-R~ 488 (495)
T 2hi4_A 469 PIYGLTMKH-ARCEHVQAR-RF 488 (495)
T ss_dssp CBCSSSCBC-CCCCCBEEE-CC
T ss_pred ccCCceecC-CCcceEEEE-Ec
Confidence 455667665 567 99999 84
No 7
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=4.7e-76 Score=585.51 Aligned_cols=462 Identities=24% Similarity=0.352 Sum_probs=365.5
Q ss_pred cCCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc
Q 009899 31 SNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT 110 (523)
Q Consensus 31 ~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~ 110 (523)
.+++.+.||||+++|++||++.+.. .+++..+.+|+++||+||++++|+.++++|+||+++++|+.++...|++++...
T Consensus 5 ~~~~~~lpPgP~~~PliG~~~~~~~-~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~ 83 (476)
T 3e6i_A 5 TSSKGKLPPGPFPLPIIGNLFQLEL-KNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLP 83 (476)
T ss_dssp -----CCCCCCCCBTTTBTGGGCCT-TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCG
T ss_pred ccCCCCCCcCCCCcccccChhhhcc-ccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCc
Confidence 3445678999999999999998854 678899999999999999999999999999999999999998877787776544
Q ss_pred ccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHH--HHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH
Q 009899 111 VGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRL--ELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF 188 (523)
Q Consensus 111 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~ 188 (523)
.......+ + ++..+|+.|+++|+++. +.|+...+ ..+++.+.+.++.+++.+.+. . ++ ++|+..++
T Consensus 84 ~~~~~~~~--~-l~~~~g~~w~~~Rr~~~-~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~--~~-~~d~~~~~ 151 (476)
T 3e6i_A 84 AFHAHRDR--G-IIFNNGPTWKDIRRFSL-TTLRNYGMGKQGNESRIQREAHFLLEALRKT-----Q--GQ-PFDPTFLI 151 (476)
T ss_dssp GGGGGTTS--S-STTCCSTTHHHHHHHHH-HHHHHTC-CCSHHHHHHHHHHHHHHHHHHTT-----T--TS-CBCTHHHH
T ss_pred hhheecCC--C-EEecCCcHHHHHHHHHH-HHHHhcCCCchHHHHHHHHHHHHHHHHHHHh-----C--CC-CcChHHHH
Confidence 33322222 3 44557999999999876 44443222 345788888898888888552 1 44 79999999
Q ss_pred HHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccc--cccccccc-ccccccccccHHHHHHHHHHHHHH
Q 009899 189 GDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGV--FLVRDALP-FLGWLDIGGYEKAMKKTAKELDSL 265 (523)
Q Consensus 189 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P-~l~~~~~~~~~~~~~~~~~~l~~~ 265 (523)
..+++|+|+.++||.++ +. .+.+ ...+...+.+.+..... ..+...+| ++.+++ ...++..+..+.+.++
T Consensus 152 ~~~~~dvi~~~~fG~~~-~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp--~~~~~~~~~~~~~~~~ 224 (476)
T 3e6i_A 152 GCAPCNVIADILFRKHF-DY---NDEK-FLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP--GSHRKVIKNVAEVKEY 224 (476)
T ss_dssp THHHHHHHHHHHHSCCC-CT---TCHH-HHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC--SHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCC-CC---CCHH-HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHH
Confidence 99999999999999998 54 2222 24455555554433222 11223455 444442 2346677778889999
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHH
Q 009899 266 IEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRREL 344 (523)
Q Consensus 266 ~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~ 344 (523)
+.+.|+++++..+.+ ...|+++.|+....++..+ .+..+ ++++.+++..+++||+|||+.+++|++++|++||++|
T Consensus 225 ~~~~i~~~~~~~~~~--~~~d~~~~ll~~~~~~~~~-~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~ 301 (476)
T 3e6i_A 225 VSERVKEHHQSLDPN--CPRDLTDCLLVEMEKEKHS-AERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIE 301 (476)
T ss_dssp HHHHHHHHHHTCCTT--SCCSHHHHHHHHHHSSSSC-SSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHhhcCCCC--CCccHHHHHHHHHHhcccC-CCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHH
Confidence 999999888765443 4569999999876543111 22345 8899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCC
Q 009899 345 EKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRV 424 (523)
Q Consensus 345 ~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~ 424 (523)
++|++||+++++.++.++++++.+||||+|||+||||++|++|..++|.+++|++++||.||+|+.|.++.+++|+||++
T Consensus 302 ~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~ 381 (476)
T 3e6i_A 302 EKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQE 381 (476)
T ss_dssp HHHHHHHHHHTTTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTT
T ss_pred HHHHHHHHHhcCCCCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCccc
Confidence 99999999999877889999999999999999999999999997679999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCC-cccccCcC-CCcc
Q 009899 425 WSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGE-AWVDMTGT-AGLT 502 (523)
Q Consensus 425 ~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~-~~~~~~~~-~~~~ 502 (523)
|+||++|+||||+++++.. ..+..|+|||.|+|.|+|++||++|++++++.|+++|++++..+ .++++... .+++
T Consensus 382 ~~~p~~F~PeR~l~~~~~~---~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~ 458 (476)
T 3e6i_A 382 FPDPEKFKPEHFLNENGKF---KYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFG 458 (476)
T ss_dssp SSSTTSCCGGGGBCTTSSB---CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSS
T ss_pred CCCccccCchhhcCCCCCc---cCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccc
Confidence 9999999999999765321 24567999999999999999999999999999999999997543 33444443 5555
Q ss_pred cccCCCceEEeeccCCC
Q 009899 503 NIRATPLEILLKPRLPS 519 (523)
Q Consensus 503 ~~~~~~~~v~~~~r~~~ 519 (523)
.. +.+++|+++||++.
T Consensus 459 ~~-p~~~~~~~~~R~~~ 474 (476)
T 3e6i_A 459 CI-PPRYKLCVIPRSHH 474 (476)
T ss_dssp EE-CCCCCEEEEECC--
T ss_pred cC-CCCeEEEEEecccc
Confidence 54 47899999999864
No 8
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=8.8e-76 Score=582.25 Aligned_cols=459 Identities=24% Similarity=0.371 Sum_probs=364.4
Q ss_pred CCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccc
Q 009899 34 GKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGK 113 (523)
Q Consensus 34 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~ 113 (523)
..+.||||+++|++||++.+.. ++++..+.+++++||+||++++|+.+.++|+||+++++|+.++...|++++......
T Consensus 8 ~~~~pPgP~~~p~iG~~~~~~~-~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~ 86 (476)
T 1po5_A 8 KGKLPPGPSPLPVLGNLLQMDR-KGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVD 86 (476)
T ss_dssp -CCCCCCSCCBTTTBTGGGCCT-TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGC
T ss_pred CCCCCcCCCCCCccccHHhccC-CcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHH
Confidence 3457999999999999998843 677899999999999999999999999999999999999977666676655433222
Q ss_pred cccCCCcceeeCCCChhHHHHHHhHHHhcCCHH--HHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHH
Q 009899 114 LLGHNYANFGFSPYNAYWREMRKITASELLSNR--RLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDL 191 (523)
Q Consensus 114 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~ 191 (523)
.... +.++ +..+|+.|+++|+++. +.|+.. .++.+++.+.+.++.+++.+.+. . ++ ++|+.+++..+
T Consensus 87 ~~~~-~~~l-~~~~g~~w~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~--~~-~~d~~~~~~~~ 155 (476)
T 1po5_A 87 PIFQ-GYGV-IFANGERWRALRRFSL-ATMRDFGMGKRSVEERIQEEARCLVEELRKS-----K--GA-LLDNTLLFHSI 155 (476)
T ss_dssp SCCS-SCCC-CCSSHHHHHHHHHHHH-HHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT-----T--TC-CBCCHHHHHHH
T ss_pred hhcC-CCce-EecCCcHHHHHHHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHhc-----C--CC-ccCHHHHHHHH
Confidence 2211 2234 4457999999999887 677665 45678899999999999998653 1 44 79999999999
Q ss_pred HHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccc--cccccccc-cccccccccHHHHHHHHHHHHHHHHH
Q 009899 192 NLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVF--LVRDALPF-LGWLDIGGYEKAMKKTAKELDSLIEE 268 (523)
Q Consensus 192 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~~~~~~~~~~~~~~~~~l~~~~~~ 268 (523)
++|+|+.++||.++ +. .+.+ +..+.+.+...+...... .+...+|+ +.+++ ...++..+..+.+.+++.+
T Consensus 156 ~~~vi~~~~fG~~~-~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp--~~~~~~~~~~~~~~~~~~~ 228 (476)
T 1po5_A 156 TSNIICSIVFGKRF-DY---KDPV-FLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFP--GTHRQIYRNLQEINTFIGQ 228 (476)
T ss_dssp HHHHHHHHHHSSCC-CT---TCHH-HHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSS--CSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCC-CC---CCHH-HHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcC--cHHHHHHHHHHHHHHHHHH
Confidence 99999999999988 43 2222 344555555444221110 11224554 33332 2245667778889999999
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHH
Q 009899 269 WIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKV 347 (523)
Q Consensus 269 ~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l 347 (523)
.|+++++..+.+ ...|+++.|+....+.. ...+..+ ++++.+++.++++||+|||+.+++|++++|++||++|++|
T Consensus 229 ~i~~r~~~~~~~--~~~d~l~~ll~~~~~~~-~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l 305 (476)
T 1po5_A 229 SVEKHRATLDPS--NPRDFIDVYLLRMEKDK-SDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERV 305 (476)
T ss_dssp HHHHHHTTCCTT--SCCSHHHHHHHHHHHHT-CCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHhcCCC--CcccHHHHHHHHHHhhc-cCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHH
Confidence 999887653332 45699999997543321 1112346 8899999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCC
Q 009899 348 KKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSD 427 (523)
Q Consensus 348 ~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~ 427 (523)
++||+++++.++.++.+++.+||||+|||+||||++|+++..++|.+++|++++||.||+|+.|.++.+++||||++|+|
T Consensus 306 ~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~d 385 (476)
T 1po5_A 306 QKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFET 385 (476)
T ss_dssp HHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSS
T ss_pred HHHHHHHhCCCCCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCC
Confidence 99999999877789999999999999999999999999997679999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcc-cccCc-CCCccccc
Q 009899 428 PLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAW-VDMTG-TAGLTNIR 505 (523)
Q Consensus 428 p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~-~~~~~~~~ 505 (523)
|++|+||||+++++.. ..+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.+ ++... ..+++..|
T Consensus 386 p~~F~PeR~l~~~~~~---~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p 462 (476)
T 1po5_A 386 PNTFNPGHFLDANGAL---KRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP 462 (476)
T ss_dssp TTSCCGGGGBCTTSCB---CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCC
T ss_pred ccccCchhhCCCCCCc---cCCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecC
Confidence 9999999999754321 1356899999999999999999999999999999999999887642 33433 55677766
Q ss_pred CCCceEEeeccCC
Q 009899 506 ATPLEILLKPRLP 518 (523)
Q Consensus 506 ~~~~~v~~~~r~~ 518 (523)
.++.|++++|++
T Consensus 463 -~~~~v~~~~R~~ 474 (476)
T 1po5_A 463 -PSYQIRFLARHH 474 (476)
T ss_dssp -CCCCBEEEECC-
T ss_pred -cceEEEEEecCC
Confidence 799999999975
No 9
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=2.2e-77 Score=598.04 Aligned_cols=459 Identities=23% Similarity=0.390 Sum_probs=357.6
Q ss_pred HHHHHhhcCCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhccccc
Q 009899 24 FYYLQKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDI 103 (523)
Q Consensus 24 ~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~ 103 (523)
+++..++..++.+.||||++ ++.+.. ++++..+.+++++|||||++++|+.++++|+||+++++|+.++...|
T Consensus 17 ~~~~~~~~~~~~~lPPGP~~------l~~~~~-~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f 89 (496)
T 3qz1_A 17 HLLWGRWKLRNLHLPPLVPG------FLHLLQ-PNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDF 89 (496)
T ss_dssp ------------CCCCBCSC------SCTTSS-SCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTT
T ss_pred HHHHhhhhccCCCCCcCCcc------ccccCC-CcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhh
Confidence 33444455666789999986 344433 67899999999999999999999999999999999999999887778
Q ss_pred CCCCCccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccch
Q 009899 104 SSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLE 183 (523)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vd 183 (523)
++++..........+..++.+..+|+.|+++|+++. +.|+.+.++.+++.+.++++.+++.+.+. . ++ ++|
T Consensus 90 ~~r~~~~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l~~~-----~--~~-~vd 160 (496)
T 3qz1_A 90 AGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTR-SALLLGTRSSMEPWVDQLTQEFCERMRVQ-----A--GA-PVT 160 (496)
T ss_dssp CBCCCCTTTTTSCTTCCCSSSSCCSHHHHHHHHHHH-HHHHC--CCCHHHHHHHHHHHHHHHHHTT-----C--SC-CCH
T ss_pred CCCCCcchHHHhcCCCCceEECCCCHHHHHHHHHHH-HHHhhccHhhHHHHHHHHHHHHHHHHHhc-----C--CC-ccC
Confidence 777765443333323324555544999999999998 67776667789999999999999988652 2 44 899
Q ss_pred HHHHHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccc--ccccccccccccccccccHHHHHHHHHH
Q 009899 184 MKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGV--FLVRDALPFLGWLDIGGYEKAMKKTAKE 261 (523)
Q Consensus 184 l~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~ 261 (523)
+.+++..+++|+|+.++||. . .+.. ...+.+.+......... ..+...+|++.+++. ...++..+..+.
T Consensus 161 ~~~~~~~~~~dvi~~~~fG~-~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~-~~~~~~~~~~~~ 231 (496)
T 3qz1_A 161 IQKEFSLLTCSIICYLTFGN-K------EDTL-VHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN-PGLWRLKQAIEN 231 (496)
T ss_dssp HHHHHTHHHHHHTTTTSTTC-C------CHHH-HHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCC-C------CChH-HHHHHHHHHHHHHHhccchhHHHHhHHHHHhCCh-HHHHHHHHHHHH
Confidence 99999999999999999998 2 2222 24566666665544333 234456787776643 335677788889
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcC
Q 009899 262 LDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNN 340 (523)
Q Consensus 262 l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~ 340 (523)
+.+++.+.++++++..+.+ ...|+++.|++...+...+.....+ ++++.+++.++++||+|||+.+++|++++|++|
T Consensus 232 ~~~~~~~~i~~~~~~~~~~--~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~ 309 (496)
T 3qz1_A 232 RDHMVEKQLRRHKESMVAG--QWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHH 309 (496)
T ss_dssp HHHHHHHHHHHHHHSCCSS--CCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhccCC--CccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhC
Confidence 9999999999888765443 5578999999865432111111145 788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCC----CCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEccc
Q 009899 341 RRELEKVKKELDSVVGK----ERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLW 416 (523)
Q Consensus 341 p~~~~~l~~Ei~~~~~~----~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~ 416 (523)
|++|+||++|++++++. ++.+ ++++.+||||+|||+||||++|++|..++|.+++|++++||.||+||.|.++.+
T Consensus 310 P~~~~kl~~Ei~~~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~ 388 (496)
T 3qz1_A 310 PEIQRRLQEELDRELGPGASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQ 388 (496)
T ss_dssp HHHHHHHHHHHHHHHCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHH
T ss_pred HHHHHHHHHHHHHHhCCCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechH
Confidence 99999999999999976 4566 999999999999999999999999987799999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCc-cccc
Q 009899 417 KLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEA-WVDM 495 (523)
Q Consensus 417 ~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~-~~~~ 495 (523)
++||||++|+||++|+||||++++ ....++|||.|+|.|+|++||++|++++++.|+++|+++++++. .+++
T Consensus 389 ~~~~d~~~~~dp~~F~PeR~l~~~-------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~ 461 (496)
T 3qz1_A 389 GAHLDETVWEQPHEFRPDRFLEPG-------ANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSL 461 (496)
T ss_dssp HHTTCTTTSSSTTSCCCCCCC----------CCCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCS
T ss_pred HhhCChhhcCCcccCCcccccCCC-------CCcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCC
Confidence 999999999999999999999754 12278999999999999999999999999999999999988542 2334
Q ss_pred CcC--CCcccccCCCceEEeeccCC
Q 009899 496 TGT--AGLTNIRATPLEILLKPRLP 518 (523)
Q Consensus 496 ~~~--~~~~~~~~~~~~v~~~~r~~ 518 (523)
... .+++..| +++.|+++||+.
T Consensus 462 ~~~~~~~~~~~~-~~~~v~~~~R~~ 485 (496)
T 3qz1_A 462 QPDPYCGVNLKV-QPFQVRLQPRGV 485 (496)
T ss_dssp CCSCCCSSCCCC-CCCCCCCCCC--
T ss_pred CcccCcceEecC-CceEEEEEEecc
Confidence 333 4666665 599999999964
No 10
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=3.3e-76 Score=585.42 Aligned_cols=462 Identities=23% Similarity=0.357 Sum_probs=367.8
Q ss_pred CCCCCCCCCCCCccccccccccCCCC--chHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc
Q 009899 33 TGKKPPEAAGKWPMIGHLHLLAGPQL--PHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT 110 (523)
Q Consensus 33 ~~~~~~pgp~~~p~~G~~~~~~~~~~--~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~ 110 (523)
++.+.||||+++|++||++.+.. .. ++..+.+++++||+||++++|+.++++|+||+++++|+.++...|++++...
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~-~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~ 87 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAA-SSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP 87 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHH-CSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCH
T ss_pred CCCCCCCCCCCCcccccHhhcCc-ccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcH
Confidence 34568999999999999988763 22 7889999999999999999999999999999999999988766677776543
Q ss_pred ccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHH--HHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH
Q 009899 111 VGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRL--ELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF 188 (523)
Q Consensus 111 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~ 188 (523)
.......+ .++++..+|+.|+++|+++. +.|+...+ ..+++.+.+.++.+++.+.+. . ++ ++|+.+++
T Consensus 88 ~~~~~~~~-~~~~~~~~g~~w~~~R~~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~--~~-~~d~~~~~ 157 (481)
T 3czh_A 88 LFMKMTKM-GGLLNSRYGRGWVDHRRLAV-NSFRYFGYGQKSFESKILEETKFFNDAIETY-----K--GR-PFDFKQLI 157 (481)
T ss_dssp HHHHHHTT-CSSTTCCSSHHHHHHHHHHH-HHHHHTTTTSTTHHHHHHHHHHHHHHHHHTT-----T--TC-CBCCHHHH
T ss_pred HHHhhcCC-CCeEeCCCChHHHHHHHHHH-HHHHHhcCChHHHHHHHHHHHHHHHHHHHHc-----C--CC-CcCHHHHH
Confidence 22222211 23445568999999999998 67765433 568899999999999888652 1 44 79999999
Q ss_pred HHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccccc--ccccccccccccccccHHHHHHHHHHHHHHH
Q 009899 189 GDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFL--VRDALPFLGWLDIGGYEKAMKKTAKELDSLI 266 (523)
Q Consensus 189 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~ 266 (523)
..+++|+++.++||.++ +. .+.+ +..+.+.+.+.+....... +...+|++.+++. ...++..++.+.+.+++
T Consensus 158 ~~~~~~vi~~~~fG~~~-~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~ 231 (481)
T 3czh_A 158 TNAVSNITNLIIFGERF-TY---EDTD-FQHMIELFSENVELAASASVFLYNAFPWIGILPF-GKHQQLFRNAAVVYDFL 231 (481)
T ss_dssp HHHHHHHHHHHHHSSCC-CT---TCHH-HHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSS-SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCC-CC---CCHH-HHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCc-hHHHHHHHHHHHHHHHH
Confidence 99999999999999988 43 2222 2455555555544322211 3345677655432 23466677788899999
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHH
Q 009899 267 EEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELE 345 (523)
Q Consensus 267 ~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~ 345 (523)
.+.|+++++..+.+ ...|+++.|++...+.. ...+..+ ++++.+++.++++||+|||+.+++|++++|++||++|+
T Consensus 232 ~~~i~~r~~~~~~~--~~~d~l~~ll~~~~~~~-~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~ 308 (481)
T 3czh_A 232 SRLIEKASVNRKPQ--LPQHFVDAYLDEMDQGK-NDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQG 308 (481)
T ss_dssp HHHHHHHHTTCCTT--CCSSHHHHHHHHHHHTT-TCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHhcCCC--chHHHHHHHHHHHHhcc-cCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHH
Confidence 99999887653332 45699999998754321 0012346 88999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCC
Q 009899 346 KVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVW 425 (523)
Q Consensus 346 ~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~ 425 (523)
+|++|++++++.++.++++++++||||+|||+|+||++|+++..++|.+++|++++||.||+|+.|.++.+++||||++|
T Consensus 309 kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~ 388 (481)
T 3czh_A 309 QVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW 388 (481)
T ss_dssp HHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTC
T ss_pred HHHHHHHHhcCCCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccC
Confidence 99999999998778899999999999999999999999999976799999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCccccc
Q 009899 426 SDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIR 505 (523)
Q Consensus 426 ~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (523)
+||++|+||||+++++. ...+..++|||.|+|.|+|++||++|++++++.|+++|+++++++..+++....+++..
T Consensus 389 ~dP~~F~PeR~l~~~~~---~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~- 464 (481)
T 3czh_A 389 RDPEVFHPERFLDSSGY---FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQ- 464 (481)
T ss_dssp SSTTSCCGGGGBCTTSC---BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCC-
T ss_pred CCccccCCCceeCCCCC---CcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceec-
Confidence 99999999999975431 13567899999999999999999999999999999999999865433334334566665
Q ss_pred CCCceEEeeccCC
Q 009899 506 ATPLEILLKPRLP 518 (523)
Q Consensus 506 ~~~~~v~~~~r~~ 518 (523)
+.++.++++||++
T Consensus 465 p~~~~~~~~~~~~ 477 (481)
T 3czh_A 465 PQPYLICAERRHH 477 (481)
T ss_dssp CCCCCBEEEECC-
T ss_pred CCceEEEEEeccc
Confidence 5789999999975
No 11
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=1.9e-76 Score=592.27 Aligned_cols=452 Identities=22% Similarity=0.305 Sum_probs=357.7
Q ss_pred hcCCCCCCCCCCCCCccccccccccC--CCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCC
Q 009899 30 WSNTGKKPPEAAGKWPMIGHLHLLAG--PQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRP 107 (523)
Q Consensus 30 ~~~~~~~~~pgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~ 107 (523)
+.+++.+.||||+++|++||++.+.. ....+..+.+++++||+||++++|+.++|+|+||++++++++++ .|++++
T Consensus 39 ~~~~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~ 116 (503)
T 3s79_A 39 WNYEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRF 116 (503)
T ss_dssp ------CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCC
T ss_pred HHHhccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcc
Confidence 44456679999999999999988752 12345678899999999999999999999999999999999654 466665
Q ss_pred Cccc-cccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHH
Q 009899 108 KLTV-GKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKK 186 (523)
Q Consensus 108 ~~~~-~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~ 186 (523)
.... ....+..+.+++++.+|+.|+++|+++. +.|+..+++.+.+.+.+.++++++.+.+. .+. ++ .+|+.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~~l~~l~~~---~~~--~~-~vdl~~ 189 (503)
T 3s79_A 117 GSKLGLQCIGMHEKGIIFNNNPELWKTTRPFFM-KALSGPGLVRMVTVCAESLKTHLDRLEEV---TNE--SG-YVDVLT 189 (503)
T ss_dssp CCHHHHHHHTCTTSSSTTCCCHHHHHHHHHHHH-HHTSTHHHHHHHHHHHHHHHHHHTTGGGT---BCT--TS-CBCHHH
T ss_pred hhhhhhhhhccCCCceeeCCCccHHHHHHHhhh-HhhChHHHHHHHHHHHHHHHHHHHHHHHH---hcC--CC-eEcHHH
Confidence 4322 2223333445667778999999999998 89999999999999999999988877553 222 44 799999
Q ss_pred HHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHH
Q 009899 187 WFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLI 266 (523)
Q Consensus 187 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~ 266 (523)
++..+++|+++.++||.++ + +.+....+...++........ ...++.+.+ ..++..++.+.+.+++
T Consensus 190 ~~~~~~~~vi~~~~fG~~~-~-----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~~~~ 255 (503)
T 3s79_A 190 LLRRVMLDTSNTLFLRIPL-D-----ESAIVVKIQGYFDAWQALLIK---PDIFFKISW-----LYKKYEKSVKDLKDAI 255 (503)
T ss_dssp HHHHHHHHHHHHHHTCCCC-C-----HHHHHHHHHHHHHHHHHHTTC---CHHHHHSGG-----GTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCccc-C-----chhHHHHHHHHHHHHHHHhcC---cHHHhhcch-----hHHHHHHHHHHHHHHH
Confidence 9999999999999999987 2 222223333444333221111 111111112 2356677888899999
Q ss_pred HHHHHHHHhhhcCCC--CCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHH
Q 009899 267 EEWIEEHRRKKESGA--NLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRE 343 (523)
Q Consensus 267 ~~~i~~~~~~~~~~~--~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~ 343 (523)
.+.++++++..+.+. ....|+++.|++..+++ .+ ++++.+++.++++||+|||+++++|++++|++||++
T Consensus 256 ~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-------~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~ 328 (503)
T 3s79_A 256 EVLIAEKRRRISTEEKLEECMDFATELILAEKRG-------DLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNV 328 (503)
T ss_dssp HHHHHHHHHHHHTCTTTTTTCCHHHHHHHHHHTT-------SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHhhcccccchHHHHHHHHHHhcccC-------CCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHH
Confidence 999998887644321 13459999999875432 34 788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCC
Q 009899 344 LEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPR 423 (523)
Q Consensus 344 ~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~ 423 (523)
|+|+++||+++++ ++.++++++.+|||++|||+||+|++|++|.. .|.+++|++++||.|||||.|.++.+++|+| +
T Consensus 329 ~~kl~~Ei~~v~~-~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~ 405 (503)
T 3s79_A 329 EEAIIKEIQTVIG-ERDIKIDDIQKLKVMENFIYESMRYQPVVDLV-MRKALEDDVIDGYPVKKGTNIILNIGRMHRL-E 405 (503)
T ss_dssp HHHHHHHHHHHTT-TSCCCHHHHTTCHHHHHHHHHHHHHSCSSCCE-EEECSSCEEETTEEECTTCEEEECHHHHTTT-S
T ss_pred HHHHHHHHHHHhC-CCCCCHHHHhcCHHHHHHHHhhhccCCCcccc-cccccCCeeECCEEECCCCEEEeehHHhCCC-c
Confidence 9999999999998 67899999999999999999999999999986 7999999999999999999999999999999 9
Q ss_pred CCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCccc-ccCcCCCcc
Q 009899 424 VWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWV-DMTGTAGLT 502 (523)
Q Consensus 424 ~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~-~~~~~~~~~ 502 (523)
+|+||++|+||||++.. ....++|||+|+|.|+|++||.+|++++++.|+++|+++++++.+. +.....+++
T Consensus 406 ~~~dp~~F~PeRf~~~~-------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~ 478 (503)
T 3s79_A 406 FFPKPNEFTLENFAKNV-------PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLS 478 (503)
T ss_dssp SCSSTTSCCGGGGSSCC-------CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSS
T ss_pred cCCChhhCChhhcCCCC-------CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCcccccccccee
Confidence 99999999999998643 3457999999999999999999999999999999999998876432 344455777
Q ss_pred cccCCC---ceEEeeccCCCCC
Q 009899 503 NIRATP---LEILLKPRLPSSL 521 (523)
Q Consensus 503 ~~~~~~---~~v~~~~r~~~~~ 521 (523)
..|+.+ ++|+++||++...
T Consensus 479 ~~p~~~~~~~~v~~~~R~~~~~ 500 (503)
T 3s79_A 479 LHPDETKNMLEMIFTPRNSDRC 500 (503)
T ss_dssp EEECTTSCCCCEEEEECC----
T ss_pred ecCCCccceeeEEeccCCchhh
Confidence 777665 9999999987654
No 12
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=5.7e-76 Score=583.58 Aligned_cols=460 Identities=21% Similarity=0.336 Sum_probs=366.1
Q ss_pred CCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcccc
Q 009899 33 TGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVG 112 (523)
Q Consensus 33 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~ 112 (523)
++.+.||||+++|++||++.+.. .+++..+.+++++||+||++++|+.++++|+||+++++|+.++...|++++.....
T Consensus 7 ~~~~~pPgP~~~p~iG~~~~~~~-~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~ 85 (476)
T 2fdv_A 7 SKGKLPPGPTPLPFIGNYLQLNT-EQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATF 85 (476)
T ss_dssp -CCBCCCCCCCBTTTBTGGGCCT-TBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHH
T ss_pred ccCCCCCCCCCCcccccHhhcCC-cchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHH
Confidence 33457999999999999998843 67788999999999999999999999999999999999997766667665543322
Q ss_pred ccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHH--HHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHH
Q 009899 113 KLLGHNYANFGFSPYNAYWREMRKITASELLSNRRL--ELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGD 190 (523)
Q Consensus 113 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~ 190 (523)
..... +.++ +..+|+.|+++|+++. +.|+...+ +.+++.+.+.++.+++.+... . ++ ++|+.+++..
T Consensus 86 ~~~~~-~~~l-~~~~g~~~~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~--~~-~vd~~~~~~~ 154 (476)
T 2fdv_A 86 DWVFK-GYGV-VFSNGERAKQLRRFSI-ATLRDFGVGKRGIEERIQEEAGFLIDALRGT-----G--GA-NIDPTFFLSR 154 (476)
T ss_dssp HHHHT-TCSS-SSCCHHHHHHHHHHHH-HHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT-----T--TC-CBCCHHHHHH
T ss_pred hhhcC-CCCe-EecCchHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHhc-----C--CC-ccChHHHHHH
Confidence 21211 2234 4447999999999998 77876655 678999999999999998653 1 44 7999999999
Q ss_pred HHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccc--cccccccc-cccccccccHHHHHHHHHHHHHHHH
Q 009899 191 LNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVF--LVRDALPF-LGWLDIGGYEKAMKKTAKELDSLIE 267 (523)
Q Consensus 191 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~~~~~~~~~~~~~~~~~l~~~~~ 267 (523)
+++|+++.++||.++ +. .+.+ ...+...+...+...... .+...+|+ +.+++ ...++..++.+.+.+++.
T Consensus 155 ~~~~vi~~~~fG~~~-~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~--~~~~~~~~~~~~~~~~~~ 227 (476)
T 2fdv_A 155 TVSNVISSIVFGDRF-DY---KDKE-FLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP--GPQQQAFQLLQGLEDFIA 227 (476)
T ss_dssp HHHHHHHHHHHSSCC-CT---TCHH-HHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC--SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcC-CC---CCHH-HHHHHHHHHHHHHhhcccccchhhhhhhHHHhcC--cHHHHHHHHHHHHHHHHH
Confidence 999999999999988 53 2222 245555555544322110 12234564 33432 234566777888999999
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHH
Q 009899 268 EWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEK 346 (523)
Q Consensus 268 ~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~ 346 (523)
+.|+++++..+.+ ...|+++.|++...+.. ...+..+ ++++.+++.++++||+|||+.+++|++++|++||++|++
T Consensus 228 ~~i~~r~~~~~~~--~~~d~l~~ll~~~~~~~-~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~ 304 (476)
T 2fdv_A 228 KKVEHNQRTLDPN--SPRDFIDSFLIRMQEEE-KNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAK 304 (476)
T ss_dssp HHHHHHHTTCCTT--SCCSHHHHHHHHHHHTT-TCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHhcCCC--CCccHHHHHHHHHHhcc-cCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHH
Confidence 9999887653332 45799999998754321 0112345 889999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCC
Q 009899 347 VKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWS 426 (523)
Q Consensus 347 l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~ 426 (523)
|++||+++++.++.++.+++.+||||+|||+||||++|+++..++|.+++|++++||.||+|+.|.++.+++||||++|+
T Consensus 305 l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~ 384 (476)
T 2fdv_A 305 VHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFS 384 (476)
T ss_dssp HHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCS
T ss_pred HHHHHHHhhcCCCCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcC
Confidence 99999999987777899999999999999999999999999667999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcc-cccCc-CCCcccc
Q 009899 427 DPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAW-VDMTG-TAGLTNI 504 (523)
Q Consensus 427 ~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~-~~~~~~~ 504 (523)
||++|+||||+++++.. ..+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.+ +++.. ..+++..
T Consensus 385 dp~~F~PeR~l~~~~~~---~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~ 461 (476)
T 2fdv_A 385 NPQDFNPQHFLNEKGQF---KKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATI 461 (476)
T ss_dssp STTSCCGGGGBCTTSCB---CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEE
T ss_pred CccccCchhhCCCCCCC---CCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeec
Confidence 99999999999754321 2456899999999999999999999999999999999999887642 33433 4566776
Q ss_pred cCCCceEEeeccCC
Q 009899 505 RATPLEILLKPRLP 518 (523)
Q Consensus 505 ~~~~~~v~~~~r~~ 518 (523)
| .++.|+++||++
T Consensus 462 p-~~~~v~~~~R~~ 474 (476)
T 2fdv_A 462 P-RNYTMSFLPRHH 474 (476)
T ss_dssp C-CCCCEEEEEC--
T ss_pred C-CceEEEEEeccc
Confidence 6 799999999964
No 13
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=2.2e-75 Score=579.91 Aligned_cols=459 Identities=22% Similarity=0.346 Sum_probs=354.6
Q ss_pred CCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccc
Q 009899 34 GKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGK 113 (523)
Q Consensus 34 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~ 113 (523)
..+.||||+++|++||++.+.. .+++..+.+++++||+||++++|+.+.++|+||+++++|+.++...|++++......
T Consensus 9 ~~~~pPgP~~~p~iG~~~~~~~-~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~ 87 (477)
T 1r9o_A 9 RGKLPPGPTPLPVIGNILQIGI-KDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAE 87 (477)
T ss_dssp CCBCCCCSSSCC-----CCBCH-HHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCC
T ss_pred CCCCCCCCCCCceeccHhhcCC-CChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhh
Confidence 3457999999999999988732 567889999999999999999999899999999999999977666676655432222
Q ss_pred cccCCCcceeeCCCChhHHHHHHhHHHhcCCHH--HHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHH
Q 009899 114 LLGHNYANFGFSPYNAYWREMRKITASELLSNR--RLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDL 191 (523)
Q Consensus 114 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~ 191 (523)
.... +.++ +..+|+.|+++|+++. +.|+.. .++.+++.+.++++.+++.+.+. . ++ ++|+.+++..+
T Consensus 88 ~~~~-~~~l-~~~~g~~w~~~Rr~~~-~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~--~~-~vd~~~~~~~~ 156 (477)
T 1r9o_A 88 RANR-GFGI-VFSNGKKWKEIRRFSL-MTLRNFGMGKRSIEDRVQEEARCLVEELRKT-----K--AS-PCDPTFILGCA 156 (477)
T ss_dssp TTTC-TTSS-TTCCHHHHHHHHHHHH-HHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT-----T--TS-CBCTHHHHHHH
T ss_pred hccC-CCce-EecCChHHHHHHHHHH-HHHHHhCCChHHHHHHHHHHHHHHHHHHHhc-----C--CC-ccChHHHHHHH
Confidence 1111 2233 4457999999999887 667655 34567899999999999988652 1 34 79999999999
Q ss_pred HHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccc-c-ccccccccc-cccccccccHHHHHHHHHHHHHHHHH
Q 009899 192 NLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGG-V-FLVRDALPF-LGWLDIGGYEKAMKKTAKELDSLIEE 268 (523)
Q Consensus 192 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~P~-l~~~~~~~~~~~~~~~~~~l~~~~~~ 268 (523)
++|+|+.++||.++ +. .+.+ +..+...+...+.... . ..+...+|+ +.+++ ...++..++.+.+.+++.+
T Consensus 157 ~~~vi~~~~fG~~~-~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp--~~~~~~~~~~~~~~~~~~~ 229 (477)
T 1r9o_A 157 PCNVICSIIFHKRF-DY---KDQQ-FLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP--GTHNKLLKNVAFMKSYILE 229 (477)
T ss_dssp HHHHHHHHHHSCCC-CT---TCHH-HHHHHHHHHHHHHHHTCCBC-------CCCSCCT--TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCcC-CC---CCHH-HHHHHHHHHHHHHhhccchhHHHhhccHHHHhcc--hHHHHHHHHHHHHHHHHHH
Confidence 99999999999988 53 2222 2445444444432111 1 122334565 33332 2235667778889999999
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHH
Q 009899 269 WIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKV 347 (523)
Q Consensus 269 ~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l 347 (523)
.|+++++..+.+ ...|+++.|+....++. ...+..+ ++++.+++.++++||+|||+.+++|++++|++||++|++|
T Consensus 230 ~i~~r~~~~~~~--~~~d~l~~ll~~~~~~~-~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl 306 (477)
T 1r9o_A 230 KVKEHQESMDMN--NPQDFIDCFLMKMEKEK-HNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKV 306 (477)
T ss_dssp HHHHHHHTCCTT--CCCSHHHHHHHHHHHHT-TSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHhccCCC--CchHHHHHHHHHHHhhh-ccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHH
Confidence 999887653332 45699999997543211 0012345 8899999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCC
Q 009899 348 KKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSD 427 (523)
Q Consensus 348 ~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~ 427 (523)
++||+++++.++.++.+++++||||+|||+||||++|+++..++|.+++|++++||.||+|+.|.++.+++||||++|+|
T Consensus 307 ~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~d 386 (477)
T 1r9o_A 307 QEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPN 386 (477)
T ss_dssp HHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSS
T ss_pred HHHHHHhcCCCCCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCC
Confidence 99999999877789999999999999999999999999997679999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcc-cccCc-CCCccccc
Q 009899 428 PLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAW-VDMTG-TAGLTNIR 505 (523)
Q Consensus 428 p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~-~~~~~~~~ 505 (523)
|++|+||||+++++.. ..+..++|||.|+|.|+|++||++|++++++.|+++|++++.++.+ ++... ..+++..|
T Consensus 387 P~~F~PeR~l~~~~~~---~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p 463 (477)
T 1r9o_A 387 PEMFDPHHFLDEGGNF---KKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVP 463 (477)
T ss_dssp TTSCCGGGGBCTTSCB---CCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBC
T ss_pred ccccCccceECCCCCc---CccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecC
Confidence 9999999999754221 2456899999999999999999999999999999999999877642 23333 45667766
Q ss_pred CCCceEEeeccCC
Q 009899 506 ATPLEILLKPRLP 518 (523)
Q Consensus 506 ~~~~~v~~~~r~~ 518 (523)
.++.|++++|+.
T Consensus 464 -~~~~~~~~~R~~ 475 (477)
T 1r9o_A 464 -PFYQLCFIPIHH 475 (477)
T ss_dssp -CCCCEEEEECCC
T ss_pred -CCeEEEEEEecc
Confidence 799999999964
No 14
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=3.7e-76 Score=582.48 Aligned_cols=441 Identities=19% Similarity=0.252 Sum_probs=354.4
Q ss_pred CCCCCCCCC-CccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcccc-
Q 009899 35 KKPPEAAGK-WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVG- 112 (523)
Q Consensus 35 ~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~- 112 (523)
.+.||+|++ +|++||++.+. ++++.++.++++||||||++++++.++|+|+||+++++|+.++...++.++.....
T Consensus 10 ~~~PP~~~~~lP~iG~~~~~~--~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~ 87 (461)
T 3ld6_A 10 VKSPPYIFSPIPFLGHAIAFG--KSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLT 87 (461)
T ss_dssp CCCCCBCCCSSTTTBTHHHHH--HCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHH
T ss_pred CCCCCCCCCCcCeeeeHHHhh--hCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhh
Confidence 346777775 99999999998 78899999999999999999999999999999999999999887767655543221
Q ss_pred -ccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHH
Q 009899 113 -KLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDL 191 (523)
Q Consensus 113 -~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~ 191 (523)
...+ .+++++.+|+.|+++|+++. +.|+.+.++.+.+.+.+.++++++.+.+ +. .+|+.+.+..+
T Consensus 88 ~~~~g---~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~~~~~~~~---------~~-~~~~~~~~~~~ 153 (461)
T 3ld6_A 88 TPVFG---KGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWGE---------SG-EKNVFEALSEL 153 (461)
T ss_dssp HHHHC---TTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGCS---------EE-EEEHHHHHHHH
T ss_pred hccCC---CccccCCCcHHHHHHHHhcc-ccccHHHHhhhhHHHHHHHHHHHHHHhh---------cC-CccHHHHHHHH
Confidence 2222 24566778999999999998 8999999999999999988888776633 22 68999999999
Q ss_pred HHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Q 009899 192 NLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIE 271 (523)
Q Consensus 192 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 271 (523)
++++++.++||.++ +. ...+ .+...+..+...... ....+|.+.. . ....+..++.+.+.+++.+.|+
T Consensus 154 ~~~~i~~~~fG~~~-~~---~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~--~-~~~~~~~~~~~~l~~~~~~~i~ 221 (461)
T 3ld6_A 154 IILTASHCLHGKEI-RS---QLNE---KVAQLYADLDGGFSH--AAWLLPGWLP--L-PSFRRRDRAHREIKDIFYKAIQ 221 (461)
T ss_dssp HHHHHHHHHTCHHH-HH---TCCH---HHHHHHHHHHTTSSH--HHHHSCTTSC--C-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcch-hh---hhhh---hhhhhhhhhhhhhhh--HHHhhhhhcc--C-cHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987 43 2222 222223222221111 1112332211 1 2345566778888889998888
Q ss_pred HHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHH
Q 009899 272 EHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKE 350 (523)
Q Consensus 272 ~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E 350 (523)
+++...+ ...|+++.|++...++ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|
T Consensus 222 ~r~~~~~----~~~d~l~~ll~~~~~~-----~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~E 292 (461)
T 3ld6_A 222 KRRQSQE----KIDDILQTLLDATYKD-----GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLE 292 (461)
T ss_dssp HHTTCCC----CCCSHHHHHHTCBCTT-----SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHhcCC----CCcchhhhhHHhhhcc-----cCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHH
Confidence 7765422 5569999999875544 3356 8899999999999999999999999999999999999999999
Q ss_pred HHHhhCCC-CCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCC
Q 009899 351 LDSVVGKE-RLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL 429 (523)
Q Consensus 351 i~~~~~~~-~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~ 429 (523)
++++++.. ...+.+++++||||+|||+||||++|+++.. .|.+++|++++||.||+|+.|+++++++|+||++|+||+
T Consensus 293 i~~v~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~ 371 (461)
T 3ld6_A 293 QKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIM-MRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERL 371 (461)
T ss_dssp HHHHHCTTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCCE-EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTT
T ss_pred HHHHhcccccchhHHHHHHHhhhhheeeeccccCCchhcc-ccccccceeeCCcccCCCCeeeechHhhcCCccccCCcc
Confidence 99999764 4578899999999999999999999999975 899999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCCc
Q 009899 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATPL 509 (523)
Q Consensus 430 ~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (523)
+|+||||+++++. ...+..|+|||+|+|.|+|++||++|++++++.|+++|+|+++++..+.. ...+++. ++.++
T Consensus 372 ~F~PeRfl~~~~~---~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~-~~~~~~~-~p~~~ 446 (461)
T 3ld6_A 372 DFNPDRYLQDNPA---SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTV-NYTTMIH-TPENP 446 (461)
T ss_dssp SCCGGGGGSCCHH---HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCB-CCSSSSC-CBSSC
T ss_pred ccCccccCCCCcc---cCCCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcc-cccceEE-cCCce
Confidence 9999999986532 12456799999999999999999999999999999999999987643222 2344444 45678
Q ss_pred eEEeeccCC
Q 009899 510 EILLKPRLP 518 (523)
Q Consensus 510 ~v~~~~r~~ 518 (523)
.|++++|++
T Consensus 447 ~v~~~~Rss 455 (461)
T 3ld6_A 447 VIRYKRRST 455 (461)
T ss_dssp EEEEEECC-
T ss_pred EEEEEECCC
Confidence 999999975
No 15
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=2.4e-74 Score=574.66 Aligned_cols=464 Identities=20% Similarity=0.198 Sum_probs=358.2
Q ss_pred hcCCCCCCCCCCCCCccccccccccC---CCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCC
Q 009899 30 WSNTGKKPPEAAGKWPMIGHLHLLAG---PQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSR 106 (523)
Q Consensus 30 ~~~~~~~~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~ 106 (523)
+..+|++.+|||++.|+. +++.+.. ...++..+.+++++|||||++++|+.++|+|+||+++++|+.+++ .|+++
T Consensus 3 r~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r 80 (487)
T 3n9y_A 3 RSPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPER 80 (487)
T ss_dssp -CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCC
T ss_pred CCCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCC
Confidence 355778899999988875 6555531 135678899999999999999999999999999999999998764 57666
Q ss_pred CCcccc---ccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccch
Q 009899 107 PKLTVG---KLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLE 183 (523)
Q Consensus 107 ~~~~~~---~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vd 183 (523)
+..... ......+ ..++..+|+.|+++|+++.+.+|+.++++.+.+.+.+.++.+++.+......... +++ ++|
T Consensus 81 ~~~~~~~~~~~~~~~~-~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~-~~~-~vd 157 (487)
T 3n9y_A 81 FLIPPWVAYHQYYQRP-IGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGS-GNY-SGD 157 (487)
T ss_dssp CCCHHHHHHHHHTTCC-CCGGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTS-SSE-EEC
T ss_pred CCCcHHHHHHHHcccc-CCCccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhccccc-CCC-Ccc
Confidence 653321 1111122 2346678999999999998447999999999999999999999999875321111 134 799
Q ss_pred HHHHHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccc--cccccccccHHHHHHHHHH
Q 009899 184 MKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPF--LGWLDIGGYEKAMKKTAKE 261 (523)
Q Consensus 184 l~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~ 261 (523)
+.+++..+++|+|+.++||.++ +...+........+...+...+..... ...+|. +.++ .....++..+..+.
T Consensus 158 ~~~~~~~~t~dvi~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~l~~~~-~~~~~~~~~~~~~~ 232 (487)
T 3n9y_A 158 ISDDLFRFAFESITNVIFGERQ-GMLEEVVNPEAQRFIDAIYQMFHTSVP---MLNLPPDLFRLF-RTKTWKDHVAAWDV 232 (487)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCC-CTTSSSCCHHHHHHHHHHHHHHHHHGG---GTTSCHHHHHHH-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccc-cccCCCCChHHHHHHHHHHHHHHHHHH---HHhcCHHHHhhc-ccHHHHHHHHHHHH
Confidence 9999999999999999999998 654222222234555555554432221 222332 2222 11223444445555
Q ss_pred HHHHHHHHHHHHHhhhc---CCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHH
Q 009899 262 LDSLIEEWIEEHRRKKE---SGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLL 337 (523)
Q Consensus 262 l~~~~~~~i~~~~~~~~---~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L 337 (523)
+.+++.+.++++.++.. .......|+++.|++.. .+ ++++.+++..+++||+|||+.+++|++++|
T Consensus 233 ~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~----------~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L 302 (487)
T 3n9y_A 233 IFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGDS----------KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEM 302 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCSSCCCHHHHHHHSC----------SSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhcC----------CCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 56666666665543311 11124568999998631 24 788999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccc
Q 009899 338 LNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWK 417 (523)
Q Consensus 338 ~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~ 417 (523)
++||++|+||++|++++++.++.++++++.+||||+|||+||||++|+++. ++|.+++|++++||.||+||.|.++.++
T Consensus 303 ~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~ 381 (487)
T 3n9y_A 303 ARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVT-LQRYLVNDLVLRDYMIPAKTLVQVAIYA 381 (487)
T ss_dssp HHCHHHHHHHHHHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSE-EEEECSSCEEETTEEECTTCEEEEEHHH
T ss_pred HhChHHHHHHHHHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCcccc-cceeecCceeeCCEEECCCCEEEeCcHH
Confidence 999999999999999998766667799999999999999999999999985 5999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCc
Q 009899 418 LQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTG 497 (523)
Q Consensus 418 ~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 497 (523)
+||||++|+||++|+||||++.++ ...+..++|||.|+|.|+|++||++|++++++.|+++|+|++.++. ++..
T Consensus 382 ~~~d~~~~~dp~~F~PeR~l~~~~----~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~ 455 (487)
T 3n9y_A 382 LGREPTFFFDPENFDPTRWLSKDK----NITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLS--DVGT 455 (487)
T ss_dssp HHTCTTTSSSTTSCCGGGGTCSCT----TSSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCC--CCCE
T ss_pred hcCCcccCCCcccCChhhcCCCCC----CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCc--cccc
Confidence 999999999999999999997542 1246789999999999999999999999999999999999988764 3333
Q ss_pred CCCcccccCCCceEEeeccCCCC
Q 009899 498 TAGLTNIRATPLEILLKPRLPSS 520 (523)
Q Consensus 498 ~~~~~~~~~~~~~v~~~~r~~~~ 520 (523)
..+++..|++++.|+++||+...
T Consensus 456 ~~~~~~~p~~~~~~~~~~r~~~~ 478 (487)
T 3n9y_A 456 TFNLILMPEKPISFTFWPFNQEA 478 (487)
T ss_dssp EESSSEEESSCCCEEEEEC----
T ss_pred ceeeeecCCCCceeEEEECCcch
Confidence 45677888999999999997653
No 16
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=7.6e-74 Score=562.52 Aligned_cols=440 Identities=20% Similarity=0.258 Sum_probs=348.2
Q ss_pred HhhcCCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCC
Q 009899 28 QKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRP 107 (523)
Q Consensus 28 ~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~ 107 (523)
+.++.++.+.||||+++|++||++.+. .+++ .+.+++++||+||++++++.+.++|+||+++++|+.++...|+...
T Consensus 4 yp~~~~~~~~pPgp~~~P~iG~~~~~~--~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~ 80 (444)
T 2ve3_A 4 SPTNLNSLPIPPGDFGLPWLGETLNFL--NDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATW 80 (444)
T ss_dssp -----CCCCCCCCCCCBTTTBTHHHHH--HCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCccccHHHHh--cCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccch
Confidence 444556778999999999999998886 4456 7889999999999999888899999999999999987755454222
Q ss_pred CccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHH
Q 009899 108 KLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKW 187 (523)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~ 187 (523)
........+. .++ +..+|+.|+++|+++. +.|+.++++.+.+.+.+.++.+++.+.. ++ ++|+.++
T Consensus 81 ~~~~~~~~g~--~~l-~~~~g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~---------~~-~vd~~~~ 146 (444)
T 2ve3_A 81 PLSTRILLGP--NAL-ATQMGEIHRSRRKILY-QAFLPRTLDSYLPKMDGIVQGYLEQWGK---------AN-EVIWYPQ 146 (444)
T ss_dssp CHHHHHHHCT--TSG-GGCCHHHHHHHHHHHH-GGGCHHHHHTTHHHHHHHHHHHHHHHHH---------SS-EEEHHHH
T ss_pred hHHHHHHhCc--ccc-ccCCchHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhcC---------CC-cEeHHHH
Confidence 1112222222 133 4467999999999998 8999999999999999999999998843 44 7999999
Q ss_pred HHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHH
Q 009899 188 FGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIE 267 (523)
Q Consensus 188 ~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~ 267 (523)
+..+++++++.++|| .. .. .+. ++.+.+..+...... +...+|. ...++..++.+.+.+++.
T Consensus 147 ~~~~~~~vi~~~~fG-~~-~~---~~~----~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~~~~~~~ 208 (444)
T 2ve3_A 147 LRRMTFDVAATLFMG-EK-VS---QNP----QLFPWFETYIQGLFS--LPIPLPN-------TLFGKSQRARALLLAELE 208 (444)
T ss_dssp HHHHHHHHHHHHHTC-HH-HH---SCT----THHHHHHHHHHHHSS--CCCCSTT-------SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CC-cc---cHH----HHHHHHHHHHHHHhc--CCccCCC-------cHHHHHHHHHHHHHHHHH
Confidence 999999999999999 33 21 111 222222222211110 1111221 123455667788889999
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHH
Q 009899 268 EWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEK 346 (523)
Q Consensus 268 ~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~ 346 (523)
+.|+++++.. . ...|+++.|++...++ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++
T Consensus 209 ~~i~~r~~~~--~--~~~d~l~~ll~~~~~~-----~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~ 279 (444)
T 2ve3_A 209 KIIKARQQQP--P--SEEDALGILLAARDDN-----NQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRER 279 (444)
T ss_dssp HHHHHHHTSC--C--CCSSHHHHHHHCBCTT-----SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHhcCC--C--CccCHHHHHHhccccC-----CCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHH
Confidence 9998887641 1 4569999999864332 2345 889999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCC
Q 009899 347 VKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWS 426 (523)
Q Consensus 347 l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~ 426 (523)
|++|++++++.+ .++++++.+||||+|||+||||++|+++.. +|.+++|++++||.||+|+.|.++.+++||||++|+
T Consensus 280 l~~Ei~~~~~~~-~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~ 357 (444)
T 2ve3_A 280 VRQEQNKLQLSQ-ELTAETLKKMPYLDQVLQEVLRLIPPVGGG-FRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYP 357 (444)
T ss_dssp HHHHHHSSCCSS-CCCHHHHTTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSS
T ss_pred HHHHHHHhccCC-CCChhhhhcChHHHHHHHHHHhcCCCccCc-cceeCCCeeECCEEECCCCEEEechHHhcCChhhcC
Confidence 999999998754 789999999999999999999999999975 899999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccC
Q 009899 427 DPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRA 506 (523)
Q Consensus 427 ~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (523)
||++|+||||++++.. ....+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.++++ ..+.+..++
T Consensus 358 dP~~F~PeR~l~~~~~--~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~ 433 (444)
T 2ve3_A 358 DPEKFDPERFTPDGSA--THNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLEL--VVTPSPRPK 433 (444)
T ss_dssp STTSCCGGGSSTTSTT--TTSCTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCCCCE--EESSSEEET
T ss_pred CcCccCccccCCCCcc--cCCCCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCCcce--eccccccCC
Confidence 9999999999975421 122456799999999999999999999999999999999999876543333 234566788
Q ss_pred CCceEEeeccC
Q 009899 507 TPLEILLKPRL 517 (523)
Q Consensus 507 ~~~~v~~~~r~ 517 (523)
.+++|++++|+
T Consensus 434 ~~l~v~~~~r~ 444 (444)
T 2ve3_A 434 DNLRVKLHSLM 444 (444)
T ss_dssp TCCEEEEEEC-
T ss_pred CCceEEEEeCC
Confidence 99999999984
No 17
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=6.6e-73 Score=557.66 Aligned_cols=444 Identities=17% Similarity=0.251 Sum_probs=334.6
Q ss_pred CCCCC-CCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcccc-c
Q 009899 36 KPPEA-AGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVG-K 113 (523)
Q Consensus 36 ~~~pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~-~ 113 (523)
+.||| |+++|++||++.+. .+++..+.+++++||+||++++++.++++|+||+++++|+.++...|+.++..... .
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~--~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~ 81 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFR--TDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTP 81 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHT--TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHH
T ss_pred CCCCCCCCCCCCccCHHHHh--hChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHh
Confidence 46887 77899999999886 67889999999999999999999999999999999999998765556666543222 1
Q ss_pred cccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHH
Q 009899 114 LLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNL 193 (523)
Q Consensus 114 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~ 193 (523)
..+. ++ + .+|+.|+++|+++. +.|+.++++.+.+.+.+.++.+++.+.. ++ ++|+.+++..+++
T Consensus 82 ~~g~---~~-~-~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~~~~---------~~-~vd~~~~~~~~~~ 145 (455)
T 2cib_A 82 IFGE---GV-V-FDASPERRKEMLHN-AALRGEQMKGHAATIEDQVRRMIADWGE---------AG-EIDLLDFFAELTI 145 (455)
T ss_dssp HHC--------------------------CCHHHHHHHHHHHHHHHHHHHTTCCS---------EE-EEEHHHHHHHHHH
T ss_pred hcCC---cc-c-cCcHHHHHHHhhhc-cccCHHHHHHHHHHHHHHHHHHHHHhCC---------CC-cEeHHHHHHHHHH
Confidence 2221 22 2 36899999999997 8999999999999999999988876522 33 7999999999999
Q ss_pred HHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009899 194 NVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEH 273 (523)
Q Consensus 194 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 273 (523)
++++.++||.++ +.. .+ . .+...+..+..... .+...+|++. . ...++..++.+.+.+++.+.|+++
T Consensus 146 ~vi~~~~fG~~~-~~~--~~-~---~~~~~~~~~~~~~~--~~~~~~p~l~---~-~~~~~~~~~~~~~~~~~~~~i~~r 212 (455)
T 2cib_A 146 YTSSACLIGKKF-RDQ--LD-G---RFAKLYHELERGTD--PLAYVDPYLP---I-ESFRRRDEARNGLVALVADIMNGR 212 (455)
T ss_dssp HHHHHHHTCHHH-HTT--CC-H---HHHHHHHHHHTTCC--GGGGTCTTCS---C-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCc-chh--hh-H---HHHHHHHHHHhhhh--HHHHhcccCC---C-hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988 431 11 2 34444444332111 1122344322 1 123455667788889999999888
Q ss_pred HhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCc-h-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHH
Q 009899 274 RRKKESGANLDLDFIDVLLSVLEGEGVDLSDFD-V-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKEL 351 (523)
Q Consensus 274 ~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~-~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei 351 (523)
++...... ...|+++.|++...++ +.. + ++++.++++.+++||+|||+.+++|++++|++||++|++|++|+
T Consensus 213 ~~~~~~~~-~~~dll~~ll~~~~~~-----~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei 286 (455)
T 2cib_A 213 IANPPTDK-SDRDMLDVLIAVKAET-----GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDEL 286 (455)
T ss_dssp HHCC------CCCHHHHHHHCBCTT-----SSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HhcccCCC-CcccHHHHHHHhhhhc-----CCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 76533210 2349999999865332 223 6 88999999999999999999999999999999999999999999
Q ss_pred HHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCC
Q 009899 352 DSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEF 431 (523)
Q Consensus 352 ~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F 431 (523)
+++++.++.++++++.+||||+|||+|+||++|+++. ++|.+++|++++||.||+|+.|.++.+++||||++|+||++|
T Consensus 287 ~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F 365 (455)
T 2cib_A 287 DELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLII-LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDF 365 (455)
T ss_dssp HHHGGGCCCHHHHTTSCCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSC
T ss_pred HHHhCCCCCCCHHHHhcCHHHHHHHHHHHhcCCcccc-cceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCcccc
Confidence 9999866778899999999999999999999999986 599999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccC-cCCCcccccCCCce
Q 009899 432 KPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMT-GTAGLTNIRATPLE 510 (523)
Q Consensus 432 ~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 510 (523)
+||||++++... ...+..++|||+|+|.|+|++||++|++++++.|+++|++++..+ ..++. ...+.+..|+.+++
T Consensus 366 ~PeR~l~~~~~~--~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~~~~p~~~~~ 442 (455)
T 2cib_A 366 VPARYEQPRQED--LLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP-PESYRNDHSKMVVQLAQPAA 442 (455)
T ss_dssp CGGGGSTTTCHH--HHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSC-GGGCCEECSSSSCEECSCCE
T ss_pred CcccCCCCCccc--ccCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCC-ccccccccccccccCCCCce
Confidence 999999654210 012567999999999999999999999999999999999998742 22332 22445666777999
Q ss_pred EEeeccCCCC
Q 009899 511 ILLKPRLPSS 520 (523)
Q Consensus 511 v~~~~r~~~~ 520 (523)
|++++|....
T Consensus 443 v~~~~R~~~~ 452 (455)
T 2cib_A 443 VRYRRRTGVH 452 (455)
T ss_dssp EEEEEC----
T ss_pred EEEEECcccc
Confidence 9999997543
No 18
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=2.3e-72 Score=555.81 Aligned_cols=447 Identities=20% Similarity=0.278 Sum_probs=346.2
Q ss_pred CCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccccc
Q 009899 36 KPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLL 115 (523)
Q Consensus 36 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~~ 115 (523)
+.+|||+++|++||++.+.. ..++..+.+++++|||||++++++.+.++|+||+++++|+.++ .|.+.+........
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~-~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~~~~~~~~ 79 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNT-DKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLSQALKFVR 79 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCS-SCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCCHHHHHHH
T ss_pred CCCCCCCCCCccccHHHHhc-ccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCchhHHHHHH
Confidence 56899999999999998864 5678889999999999999999999999999999999999643 24322221111111
Q ss_pred cCCCcceeeC-CCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHHH
Q 009899 116 GHNYANFGFS-PYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLN 194 (523)
Q Consensus 116 ~~~~~~~~~~-~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~ 194 (523)
...+.++.+. .+|+.|+++|+++. +.|+.++++.+.+.+.+.++++++.+... .. ++ ++|+.+++..+++|
T Consensus 80 ~~~~~~l~~~~~~g~~w~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----~~--~~-~vd~~~~~~~~~~~ 151 (470)
T 2ij2_A 80 DFAGDGLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWERL----NA--DE-HIEVPEDMTRLTLD 151 (470)
T ss_dssp HHHTTSGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHTC----CT--TC-CEEHHHHHHHHHHH
T ss_pred HhcCCceEEcCCCchHHHHHHHHhc-cccCHHHHHHHHHHHHHHHHHHHHHHHhh----CC--CC-eEEHHHHHHHHHHH
Confidence 1111233343 47999999999998 89999999999999999999999887642 12 44 79999999999999
Q ss_pred HHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 009899 195 VILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHR 274 (523)
Q Consensus 195 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 274 (523)
+|+.++||.++ +.....+. ..+...+...+....... ...|++.+++ ....++..+..+.+.+++.+.|++++
T Consensus 152 vi~~~~fG~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~ 224 (470)
T 2ij2_A 152 TIGLCGFNYRF-NSFYRDQP---HPFITSMVRALDEAMNKL--QRANPDDPAY-DENKRQFQEDIKVMNDLVDKIIADRK 224 (470)
T ss_dssp HHHHHHHSCCC-CGGGCSSC---CHHHHHHHHHHHHHHHTC-----CTTSGGG-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcc-cccccCCC---CHHHHHHHHHHHHHHHHH--hhhhhHhhcc-chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987 54211111 123333333221111100 0113333331 22345566677788899999998877
Q ss_pred hhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 009899 275 RKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDS 353 (523)
Q Consensus 275 ~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~ 353 (523)
+... ...|+++.|++..+++ .+..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|+++
T Consensus 225 ~~~~----~~~dll~~ll~~~~~~----~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~ 296 (470)
T 2ij2_A 225 ASGE----QSDDLLTHMLNGKDPE----TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296 (470)
T ss_dssp HHCC----CCSSHHHHHHHCCCTT----TCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred hccc----CchhHHHHHHhccCcc----cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 6421 4569999999864322 12346 8899999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccc-eeeCCCCEEEEcccccccCCCCC-CCCCCC
Q 009899 354 VVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAE-YHVPKGTRLVLNLWKLQTDPRVW-SDPLEF 431 (523)
Q Consensus 354 ~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g-~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F 431 (523)
+++. +.++++++.+||||+|||+|+||++|+++.. +|.+.+|++++| |.||+|+.|.++.+++||||++| +||++|
T Consensus 297 ~~~~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F 374 (470)
T 2ij2_A 297 VLVD-PVPSYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374 (470)
T ss_dssp HCCS-SSCCHHHHHTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSC
T ss_pred HcCC-CCCCHHHHhCCHHHHHHHHHHHhcCCCcccc-ceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCcccc
Confidence 9885 4589999999999999999999999999974 899999999999 99999999999999999999999 999999
Q ss_pred CCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCCceE
Q 009899 432 KPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATPLEI 511 (523)
Q Consensus 432 ~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 511 (523)
+|||| +.. ....+..++|||.|+|.|+|++||++|++++++.|+++|+++ .+ +..++....+++..|+ +++|
T Consensus 375 ~PeR~-~~~----~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~-~~~~~~~~~~~~~~p~-~~~v 446 (470)
T 2ij2_A 375 RPERF-ENP----SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DH-TNYELDIKETLTLKPE-GFVV 446 (470)
T ss_dssp CGGGG-SSG----GGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CT-TCCCCCEEESSSEEET-TCEE
T ss_pred Ccccc-CCC----CcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eC-CCCccccccceEecCC-CeEE
Confidence 99999 221 112346789999999999999999999999999999999999 33 2223333345667776 9999
Q ss_pred EeeccCC
Q 009899 512 LLKPRLP 518 (523)
Q Consensus 512 ~~~~r~~ 518 (523)
++++|+.
T Consensus 447 ~~~~R~~ 453 (470)
T 2ij2_A 447 KAKSKKI 453 (470)
T ss_dssp EEEECCC
T ss_pred EEEEccC
Confidence 9999964
No 19
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00 E-value=1e-72 Score=557.56 Aligned_cols=439 Identities=18% Similarity=0.248 Sum_probs=357.9
Q ss_pred CCCCCCC-CCccccccccccCCCCchHHHHHHHHhhC-CeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcccc-
Q 009899 36 KPPEAAG-KWPMIGHLHLLAGPQLPHLALGALADKYG-PLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVG- 112 (523)
Q Consensus 36 ~~~pgp~-~~p~~G~~~~~~~~~~~~~~~~~~~~kyG-~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~- 112 (523)
+.||||+ ++|++||++.+. ++++.++.+++++|| +||++++++.++++|+||+++++++.++...++.++.....
T Consensus 3 ~~PPg~p~~~P~iG~~~~~~--~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~ 80 (450)
T 3gw9_A 3 KLPPVYPVTVPILGHIIQFG--KSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMV 80 (450)
T ss_dssp SCCCBCCCCSTTTBTHHHHH--HCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGH
T ss_pred CCCCCCCCCcchhccHHHHc--cCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHH
Confidence 5688865 499999999987 678899999999999 99999999999999999999999998877777766554332
Q ss_pred ccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHH-HHHHHhhhcccccccccchHHHHHHHH
Q 009899 113 KLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIK-EIYKIWTKKKNESDQILLEMKKWFGDL 191 (523)
Q Consensus 113 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~vdl~~~~~~~ 191 (523)
...+. ++.+..+|+.|+++|+++. +.|+.++++.+.+.+.++++.+++ .+.+ . ++ .+|+.+++..+
T Consensus 81 ~~~g~---~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~------~--~~-~vd~~~~~~~~ 147 (450)
T 3gw9_A 81 PVFGE---GVAYAAPYPRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFMAANWDK------D--EG-EINLLEDCSTM 147 (450)
T ss_dssp HHHCT---TSGGGSCHHHHHHHHHHHH-HTTSGGGCTTHHHHHHHHHHHHHHHHSCS------S--EE-EEEHHHHHHHH
T ss_pred HHhcC---CcccCCCcHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHhcc------C--CC-cccHHHHHHHH
Confidence 22332 3455567999999999998 899999999999999999998887 4321 1 44 79999999999
Q ss_pred HHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Q 009899 192 NLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIE 271 (523)
Q Consensus 192 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 271 (523)
++++++.++||.++ +.. .+. ..+.+.+..+.... ......+|++.+++. ...++..++.+.+.+++.+.++
T Consensus 148 ~~~~i~~~~fG~~~-~~~--~~~---~~~~~~~~~~~~~~--~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~ 218 (450)
T 3gw9_A 148 IINTACQCLFGEDL-RKR--LDA---RRFAQLLAKMESSL--IPAAVFLPILLKLPL-PQSARCHEARTELQKILSEIII 218 (450)
T ss_dssp HHHHHHHHHSCHHH-HHH--SCH---HHHHHHHHHHHHTC--CGGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcch-hhh--hhh---HHHHHHHHHHHhcc--ccchhcccchhccCC-chhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988 331 112 34555555443322 223346777766633 2345667788889999999999
Q ss_pred HHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHh--cCHHHHHHHH
Q 009899 272 EHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLL--NNRRELEKVK 348 (523)
Q Consensus 272 ~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~--~~p~~~~~l~ 348 (523)
++++..........|+++.|++...++ +..+ ++++.++++.+++||+|||+.+++|++++|+ +||++|++++
T Consensus 219 ~r~~~~~~~~~~~~d~l~~ll~~~~~~-----~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~ 293 (450)
T 3gw9_A 219 ARKEEEVNKDSSTSDLLSGLLSAVYRD-----GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALR 293 (450)
T ss_dssp HHHHHHHHTSCCCCSHHHHHHHCBCTT-----SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHH
T ss_pred HHHHhhcccCCccchHHHHHHHhhccC-----CCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHH
Confidence 887654222225679999999875433 2345 8889999999999999999999999999999 9999999999
Q ss_pred HHHHHhhCCCCCCChhhh-cCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCC
Q 009899 349 KELDSVVGKERLLCESDI-EKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSD 427 (523)
Q Consensus 349 ~Ei~~~~~~~~~~~~~~~-~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~ 427 (523)
+|++++ ++.++.+++ .+||||+|||+||||++|+++.. +|.+++|++++||.||+|+.|.++.+++|+||++|+|
T Consensus 294 ~Ei~~~---~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~d 369 (450)
T 3gw9_A 294 KEIEEF---PAQLNYNNVMDEMPFAERCARESIRRDPPLLML-MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPE 369 (450)
T ss_dssp HHHTTC---CSSCCHHHHHHHCHHHHHHHHHHHHHSCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSS
T ss_pred HHHHhc---cCCCChHHHHHhcHHHHHHHHHHHHhCCchhcc-ccccccccccCCEEECCCCEEEEChHHhhCChhhcCC
Confidence 999988 456789999 99999999999999999999974 8999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccC-
Q 009899 428 PLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRA- 506 (523)
Q Consensus 428 p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~- 506 (523)
|++|+|||+. ..+..++|||+|+|.|+|++||++|++++++.|+++|+|+++++...+. ...+++..|+
T Consensus 370 p~~F~PeR~~---------~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~-~~~~~~~~p~~ 439 (450)
T 3gw9_A 370 PRRWDPERDE---------KVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDP-DYHTMVVGPTA 439 (450)
T ss_dssp TTSCCTTCCC---------SSTTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCE-ETTSSSCEECG
T ss_pred ccccCCCcCc---------CCCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCC-ccccceecCCC
Confidence 9999999931 1246799999999999999999999999999999999999886533222 2234566676
Q ss_pred CCceEEeeccC
Q 009899 507 TPLEILLKPRL 517 (523)
Q Consensus 507 ~~~~v~~~~r~ 517 (523)
.++.|++++|.
T Consensus 440 ~~~~v~~~~R~ 450 (450)
T 3gw9_A 440 SQCRVKYIRRK 450 (450)
T ss_dssp GGCEEEEEECC
T ss_pred CceEeEeeecC
Confidence 79999999984
No 20
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00 E-value=3.1e-71 Score=547.30 Aligned_cols=428 Identities=19% Similarity=0.295 Sum_probs=341.4
Q ss_pred CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc--cccccc--CCCcceeeCCCChhHH
Q 009899 57 QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT--VGKLLG--HNYANFGFSPYNAYWR 132 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~g~~w~ 132 (523)
+.++..+.+|+++|||||++++|+.+.|+|+||+++++|+.++ .+.+++... .....+ ..+.++++..+|+.|+
T Consensus 10 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~ 87 (456)
T 3mdm_A 10 RVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERWH 87 (456)
T ss_dssp CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHH
T ss_pred chHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHHH
Confidence 5678889999999999999999999999999999999999743 243333211 111111 1122444556899999
Q ss_pred HHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHHHHHHHHHhcccccCccccc
Q 009899 133 EMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAEN 212 (523)
Q Consensus 133 ~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~ 212 (523)
++|+++. +.|+.++++.+.+.+.+.++.+++.+... .+. ++ ++|+.+++..+++|+++.++||.++ +...+.
T Consensus 88 ~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~---~~~--~~-~vd~~~~~~~~~~dvi~~~~fG~~~-~~~~~~ 159 (456)
T 3mdm_A 88 KQRRVID-LAFSRSSLVSLMETFNEKAEQLVEILEAK---ADG--QT-PVSMQDMLTYTAMDILAKAAFGMET-SMLLGA 159 (456)
T ss_dssp HHHHHHG-GGGSHHHHHTTHHHHHHHHHHHHHHHHHT---CSS--SS-CEEHHHHHHHHHHHHHHHHHHSCCC-CGGGTC
T ss_pred HHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHh---cCC--CC-eeeHHHHHHHHHHHHHHHHHcCCCh-hhhccc
Confidence 9999998 89999999999999999999999999774 333 55 8999999999999999999999998 553222
Q ss_pred chHHHHHHHHHHHHHhhccccccccccccccccccc-cccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 009899 213 DETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDI-GGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVL 291 (523)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~l 291 (523)
.. .+...+..+...... ...|++.+++. ....+...+..+.+.+++.+.++++++..+.+.....|+++.|
T Consensus 160 ~~----~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~l 231 (456)
T 3mdm_A 160 QK----PLSQAVKLMLEGITA----SRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQI 231 (456)
T ss_dssp CH----HHHHHHHHHHHHHHH----HHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHH
T ss_pred cc----HHHHHHHHHHHHHHH----HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHH
Confidence 22 233333332221111 01222223211 1123455566777888888888888776544433567999999
Q ss_pred HHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCCh
Q 009899 292 LSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLV 370 (523)
Q Consensus 292 l~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp 370 (523)
++.... .+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++++++.++.++++++.+||
T Consensus 232 l~~~~~--------~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lp 303 (456)
T 3mdm_A 232 LKAEEG--------AQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQ 303 (456)
T ss_dssp HHHTSS--------CSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCH
T ss_pred HHhcCC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCH
Confidence 986421 23 678999999999999999999999999999999999999999999999888889999999999
Q ss_pred hHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCcc
Q 009899 371 YLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHF 450 (523)
Q Consensus 371 ~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~ 450 (523)
||+|||+||||++|+++.. +|.+++|++++||.||+||.|.++.+++|+||++|+||++|+||||++... ..+.
T Consensus 304 yl~a~i~E~lRl~p~~~~~-~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~-----~~~~ 377 (456)
T 3mdm_A 304 YLSQVLKESLRLYPPAWGT-FRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP-----KPRF 377 (456)
T ss_dssp HHHHHHHHHHHHCCSSCCE-EEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSC-----CCSS
T ss_pred HHHHHHHHHHHhCCCcccc-ccccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCC-----CCCC
Confidence 9999999999999999965 899999999999999999999999999999999999999999999997541 2456
Q ss_pred cccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCCceEEeeccCC
Q 009899 451 ELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATPLEILLKPRLP 518 (523)
Q Consensus 451 ~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~ 518 (523)
.++|||.|+|.|+|++||++|++++++.|+++|+++++++..+++. .+.+..|+.+++|++++|+.
T Consensus 378 ~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~r~~ 443 (456)
T 3mdm_A 378 TYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQ--EQATLKPLDPVLCTLRPRGW 443 (456)
T ss_dssp SCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCCCCEE--ESSSEEESSCCEEEEEECCC
T ss_pred cccCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcceee--cceEEecCCCeEEEEEEcCC
Confidence 7999999999999999999999999999999999999876544433 34567889999999999964
No 21
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=8e-71 Score=544.94 Aligned_cols=441 Identities=19% Similarity=0.283 Sum_probs=349.3
Q ss_pred CCCCCCCCC-CCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc
Q 009899 32 NTGKKPPEA-AGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT 110 (523)
Q Consensus 32 ~~~~~~~pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~ 110 (523)
..+.+.||| |+++|++||++.+. ++++.++.+++++||+||++++++.+.++|++|+++++++.++...+...+...
T Consensus 7 ~~~~~~PPg~P~~lP~iG~l~~~~--~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~ 84 (461)
T 3i3k_A 7 PAGVKSPPYIFSPIPFLGHAIAFG--KSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYS 84 (461)
T ss_dssp ---CCCCCBCCCSSTTTBTHHHHH--HCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHH
T ss_pred CCCCCCCCCCCCCCCccccHHhhc--cCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHH
Confidence 345578999 88999999999987 778999999999999999999999999999999999999987765554332211
Q ss_pred --ccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH
Q 009899 111 --VGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF 188 (523)
Q Consensus 111 --~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~ 188 (523)
....++. ++.+..+|+.|+++|+++. +.|+.++++.+.+.+.++++.+++.+.+ +. .+|+.+.+
T Consensus 85 ~~~~~~~g~---g~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~ll~~l~~---------~~-~~dl~~~~ 150 (461)
T 3i3k_A 85 RLTTPVFGK---GVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWGE---------SG-EKNVFEAL 150 (461)
T ss_dssp HHHHHHHCT---TSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGCS---------EE-EEEHHHHH
T ss_pred HhhhhhcCC---eeeeCCCcHHHHHHHHHHh-hhhCHHHHHHHHHHHHHHHHHHHHHhhh---------cC-CcCHHHHH
Confidence 1112222 3456667999999999998 7899999999999999999888877632 22 58999999
Q ss_pred HHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHH
Q 009899 189 GDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEE 268 (523)
Q Consensus 189 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~ 268 (523)
..+++++++.++||.++ .. ...+ .+...+..+...... ....+|. +++. ...++..++.+.+.+++.+
T Consensus 151 ~~~~~~~~~~~~~G~~~-~~---~~~~---~~~~~~~~~~~~~~~--~~~~~P~--~l~~-~~~~~~~~~~~~~~~~~~~ 218 (461)
T 3i3k_A 151 SELIILTASHCLHGKEI-RS---QLNE---KVAQLYADLDGGFSH--AAWLLPG--WLPL-PSFRRRDRAHREIKDIFYK 218 (461)
T ss_dssp HHHHHHHHHHHHTCHHH-HH---TCCH---HHHHHHHHHHTTSSH--HHHHSCT--TSCC-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHhh-hh---HHHH---HHHHHHHHHHhcccc--chhhccc--ccCC-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887 32 1122 233333333221111 1112332 2211 2345666778888899999
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHH
Q 009899 269 WIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKV 347 (523)
Q Consensus 269 ~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l 347 (523)
.++++++..+ ...|+++.|++...++ +..+ ++++..+++.+++||+|||+.+++|++++|++||++|+++
T Consensus 219 ~i~~~~~~~~----~~~d~l~~ll~~~~~~-----~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l 289 (461)
T 3i3k_A 219 AIQKRRQSQE----KIDDILQTLLDATYKD-----GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKC 289 (461)
T ss_dssp HHHHHTTCCC----CCCSHHHHHHTCBCTT-----SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHhccc----ccccHHHHHHHhhhcc-----CCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 9888765422 4569999999765433 2345 8899999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCC-CCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCC
Q 009899 348 KKELDSVVGKER-LLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWS 426 (523)
Q Consensus 348 ~~Ei~~~~~~~~-~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~ 426 (523)
++|++++++.+. .++.+++.+|||++|||+||+|++|+++. ++|.+.+|++++||.||+|+.|+++.+++|+||++|+
T Consensus 290 ~~Ei~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~ 368 (461)
T 3i3k_A 290 YLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWV 368 (461)
T ss_dssp HHHHHHHHCTTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCT
T ss_pred HHHHHHHhcCCCCCCCHHHHhcChHHHHHHHHHHhcCCCccc-cccccCCCccCCCEEECCCCEEEEChHHhcCCcccCC
Confidence 999999998643 46899999999999999999999999976 5999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccC
Q 009899 427 DPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRA 506 (523)
Q Consensus 427 ~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (523)
||++|+||||++.++. ...+..++|||+|+|.|+|++||.+|++++++.|+++|+|+++++..+.+. ...++..|+
T Consensus 369 ~p~~F~P~Rfl~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~-~~~~~~~p~ 444 (461)
T 3i3k_A 369 ERLDFNPDRYLQDNPA---SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVN-YTTMIHTPE 444 (461)
T ss_dssp TTTCCCGGGGGSCCHH---HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBC-CSSSSCCBS
T ss_pred CcccCCCCCCCCCCCC---CCCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcc-cceeecCCC
Confidence 9999999999976421 124567999999999999999999999999999999999999876433332 345566788
Q ss_pred CCceEEee
Q 009899 507 TPLEILLK 514 (523)
Q Consensus 507 ~~~~v~~~ 514 (523)
+|+.|.-.
T Consensus 445 ~~~~~~~~ 452 (461)
T 3i3k_A 445 NPVIRYKR 452 (461)
T ss_dssp SCEEEEEE
T ss_pred CceEEeec
Confidence 87777654
No 22
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00 E-value=3e-71 Score=548.33 Aligned_cols=437 Identities=22% Similarity=0.325 Sum_probs=328.4
Q ss_pred CCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhccccc-CCCCCcccc-
Q 009899 35 KKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDI-SSRPKLTVG- 112 (523)
Q Consensus 35 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~-~~~~~~~~~- 112 (523)
..+||||+++|++||++.+. ++++.++.++++ |||||++++++.++++|+||+++++|+.++ .| .+.+.....
T Consensus 22 ~eppPgP~~~P~iG~~~~~~--~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~ 96 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLA--RDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLE 96 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHH--HCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-----------
T ss_pred CCCCCCCCCCCcccchHHhc--cCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHH
Confidence 56799999999999999988 778889999988 999999999999999999999999999876 34 333222211
Q ss_pred ccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHH
Q 009899 113 KLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLN 192 (523)
Q Consensus 113 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~ 192 (523)
...+ ..+ ++..+|+.|+++|+++. +.|+.++++.+.+.+.+.++.+++.+.. ++ ++|+...+..++
T Consensus 97 ~~~g--~~~-l~~~dg~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---------~~-~~d~~~~~~~~~ 162 (467)
T 3dbg_A 97 GLLG--KEG-VATANGPLHRRQRRTIQ-PAFRLDAIPAYGPIMEEEAHALTERWQP---------GK-TVDATSESFRVA 162 (467)
T ss_dssp ----------------------CGGGH-HHHSTTTSTTTHHHHHHHHHHHHHHSCT---------TS-CEEHHHHHHHHH
T ss_pred HhcC--CCC-cccCCcHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhcc---------CC-cCcHHHHHHHHH
Confidence 1222 122 45568999999999998 8999999999999999999999887732 44 799999999999
Q ss_pred HHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccc--cccccccccHHHHHHHHHHHHHHHHHHH
Q 009899 193 LNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPF--LGWLDIGGYEKAMKKTAKELDSLIEEWI 270 (523)
Q Consensus 193 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~l~~~~~~~i 270 (523)
+++++.++||.++ +. .. ...+...+..+...... ...+|+ +.+++ ....++..++.+.+.+++.+.+
T Consensus 163 ~~vi~~~~~g~~~-~~-----~~-~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i 231 (467)
T 3dbg_A 163 VRVAARCLLRGQY-MD-----ER-AERLCVALATVFRGMYR---RMVVPLGPLYRLP-LPANRRFNDALADLHLLVDEII 231 (467)
T ss_dssp HHHHHHHHSCSSC-CH-----HH-HHHHHHHHHHHHHC----------------------------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcc-cc-----hh-HHHHHHHHHHHHHHHHH---HhccchhhhhhCC-ChHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999987 32 11 24555555555433221 223332 22221 1223455666778888999998
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHH
Q 009899 271 EEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKK 349 (523)
Q Consensus 271 ~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~ 349 (523)
+++++... ...|+++.|++..+++ +..+ ++++.++++.+++||+|||+.+++|++++|++||++|++|++
T Consensus 232 ~~r~~~~~----~~~dll~~ll~~~~~~-----~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~ 302 (467)
T 3dbg_A 232 AERRASGQ----KPDDLLTALLEAKDDN-----GDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRD 302 (467)
T ss_dssp HHHTTCCS----SCCSHHHHHTTC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHhcCC----CchHHHHHHHhhccCC-----CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 88765421 4569999999765433 2245 889999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCC
Q 009899 350 ELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL 429 (523)
Q Consensus 350 Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~ 429 (523)
|++++.+. +.++++++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||+|+.|.++.+++|+||++|+||+
T Consensus 303 Ei~~~~~~-~~~~~~~l~~l~yl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~ 380 (467)
T 3dbg_A 303 EVEAVTGG-RPVAFEDVRKLRHTGNVIVEAMRLRPAVWV-LTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNL 380 (467)
T ss_dssp HHHHHHTT-SCCCHHHHTTCHHHHHHHHHHHHHSCSCCC-EEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTT
T ss_pred HHHHHhCC-CCCCHHHHhhCHHHHHHHHHHhhcCCCccc-cceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCcc
Confidence 99999875 678999999999999999999999999987 5999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCCc
Q 009899 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATPL 509 (523)
Q Consensus 430 ~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (523)
+|+||||++.++. ...+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.++. ...+++..| +++
T Consensus 381 ~F~PeRfl~~~~~---~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~p-~~l 454 (467)
T 3dbg_A 381 EFDPDRWLPERAA---NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDA--VRVGITLRP-HDL 454 (467)
T ss_dssp CCCGGGGSHHHHT---TSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCEEE--EEESSSEEE-EEC
T ss_pred ccCCccCCCCccc---cCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCCCc--cceeeEecC-CCC
Confidence 9999999975421 1245679999999999999999999999999999999999998765433 334667765 578
Q ss_pred eEEeeccCC
Q 009899 510 EILLKPRLP 518 (523)
Q Consensus 510 ~v~~~~r~~ 518 (523)
.++-..|++
T Consensus 455 ~~~~~~~~~ 463 (467)
T 3dbg_A 455 LVRPVARHH 463 (467)
T ss_dssp EEEEEECC-
T ss_pred ccchhhhhc
Confidence 887777754
No 23
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00 E-value=7.3e-68 Score=527.81 Aligned_cols=451 Identities=17% Similarity=0.186 Sum_probs=343.8
Q ss_pred CCCCCCCCCCC-CccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhccc-ccCCCCCcc
Q 009899 33 TGKKPPEAAGK-WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDV-DISSRPKLT 110 (523)
Q Consensus 33 ~~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~-~~~~~~~~~ 110 (523)
...+.||||++ +|++||++.+. ++++.++.+++++|||||++++++.++++|+||+++++|+.++.. .++.++...
T Consensus 10 ~~~~~PPgp~~~lPliG~~~~~~--~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~~ 87 (491)
T 3v8d_A 10 RQTGEPPLENGLIPYLGCALQFG--ANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFAL 87 (491)
T ss_dssp CCTTSCCEEEEEESSTTTTGGGT--CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHHH
T ss_pred cCCCCCCCCCCCcceeccHHHHh--cCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHHH
Confidence 34568999998 69999999997 889999999999999999999999999999999999999976542 233222222
Q ss_pred ccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHH
Q 009899 111 VGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGD 190 (523)
Q Consensus 111 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~ 190 (523)
....++.+ .....+|+.|+++|+.+. ++|++++++.+.+.+.+.++++++.+.... .+...+. .+++.+++..
T Consensus 88 ~~~~~g~~---~~~~~~g~~~~~~Rr~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~--~~~~~~~-~~~l~~~~~~ 160 (491)
T 3v8d_A 88 SAKAFGHR---SIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSN--SKTAAWV-TEGMYSFCYR 160 (491)
T ss_dssp HHHHHTCC---CCCGGGSSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHSCCSSCG--GGGCSCE-EEEHHHHHHH
T ss_pred HHHhcCCc---ccccccchhHHHHHHHHH-HHcCccchHHHHHHHHHHHHHHHHhhhhcc--cCCCCCc-ccCHHHHHHH
Confidence 33344433 223356999999999887 899999999999999999998887543321 1100133 6899999999
Q ss_pred HHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Q 009899 191 LNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWI 270 (523)
Q Consensus 191 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i 270 (523)
+++++++..+||.++ +.. ... ...+.+.++.+... ...+|.+.+..+....++..++.+.+.+++.+.+
T Consensus 161 ~~~~~~~~~~fG~~~-~~~--~~~--~~~~~~~~~~~~~~------~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~ 229 (491)
T 3v8d_A 161 VMFEAGYLTIFGRDL-TRR--DTQ--KAHILNNLDNFKQF------DKVFPALVAGLPIHMFRTAHNAREKLAESLRHEN 229 (491)
T ss_dssp HHHHHHHHHHHCBCC-SCG--GGH--HHHHHHHHHHHHHH------HHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHH
T ss_pred HHHHHHHHHHcCccc-ccc--chh--hhhhHHHHHHHHHH------HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987 321 111 13344444333221 1223322211122344666667777766666555
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHH
Q 009899 271 EEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKK 349 (523)
Q Consensus 271 ~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~ 349 (523)
.++++ ...|+++.++...++. ..+ ++++..+++.+++||++||+.+++|++++|++||++|++|++
T Consensus 230 ~~~~~-------~~~d~l~~l~~~~~~~------~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~ 296 (491)
T 3v8d_A 230 LQKRE-------SISELISLRMFLNDTL------STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATE 296 (491)
T ss_dssp HTTCB-------SCCHHHHHHHHHHHHH------BCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred Hhccc-------cccHHHHHHHHHhhcc------CCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 43321 4468999998876544 134 788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCC----------CCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccc----cceeeCCCCEEEEcc
Q 009899 350 ELDSVVGKE----------RLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTV----AEYHVPKGTRLVLNL 415 (523)
Q Consensus 350 Ei~~~~~~~----------~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i----~g~~ip~g~~v~~~~ 415 (523)
||+++++.+ ..++.+++.+||||+|||+|+||++|+ +. ++|.+++|+++ +||.||+|+.|.++.
T Consensus 297 Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~ 374 (491)
T 3v8d_A 297 EVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYP 374 (491)
T ss_dssp HHHHHHHHTTCCCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEECSSCEEEECTTCEEEECT
T ss_pred HHHHHhhccccccccccccccCCHHHHhcChHHHHHHHHHhhcCCC-Cc-cceeccCCeeEeecCCcEEeCCCCEEEecc
Confidence 999998643 357889999999999999999999984 43 58999999999 999999999999999
Q ss_pred cccccCCCCCCCCCCCCCccccCCCCCCCC------CCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCC
Q 009899 416 WKLQTDPRVWSDPLEFKPERFLTAHKDVDV------KGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPG 489 (523)
Q Consensus 416 ~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~ 489 (523)
+++|+||++|+||++|+|+||++.++.... ...+..|+|||+|+|.|+|++||.+|++++++.|+++|||++++
T Consensus 375 ~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~ 454 (491)
T 3v8d_A 375 QLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIE 454 (491)
T ss_dssp HHHHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC-
T ss_pred hhhcCCcccCCCccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCC
Confidence 999999999999999999999976532110 11457899999999999999999999999999999999999987
Q ss_pred Ccc--cc--cCcCCCcccccCCCceEEeeccCC
Q 009899 490 EAW--VD--MTGTAGLTNIRATPLEILLKPRLP 518 (523)
Q Consensus 490 ~~~--~~--~~~~~~~~~~~~~~~~v~~~~r~~ 518 (523)
+.+ ++ .......+..|+.++.|++|..++
T Consensus 455 ~~~~~~~~~~~~~~~~~~~p~~~i~v~~~~~~~ 487 (491)
T 3v8d_A 455 GQAKCPPLDQSRAGLGILPPLNDIEFKYKFKHH 487 (491)
T ss_dssp --CCCCCBCGGGTBEEECCBSSCCEEEEEECSC
T ss_pred CCCCCCCCCcccCcCcccCCCCCeEEEEEeccc
Confidence 632 22 222233456788899999987654
No 24
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00 E-value=2.7e-67 Score=524.39 Aligned_cols=449 Identities=18% Similarity=0.219 Sum_probs=322.4
Q ss_pred CCCCCCCCCC-CccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhccc-ccCCCCCccc
Q 009899 34 GKKPPEAAGK-WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDV-DISSRPKLTV 111 (523)
Q Consensus 34 ~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~-~~~~~~~~~~ 111 (523)
..+.||||++ +|++||++.+. .+++..+.+++++||+||++++|+.++++|+||+++++|+.++.. .+...+...+
T Consensus 11 ~~~~pPgp~~~~P~iG~~~~~~--~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~~~ 88 (491)
T 3dax_A 11 QTGEPPLENGLIPYLGCALQFG--ANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFATS 88 (491)
T ss_dssp CTTCCCEEEEEESCTTTTGGGT--CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHHHHH
T ss_pred CCCCCCcCCCcccchhhHHHHh--hCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHHHHH
Confidence 3467899887 89999999887 677899999999999999999999999999999999999976542 2221111111
Q ss_pred cccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhc-ccccccccchHHHHHHH
Q 009899 112 GKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKK-KNESDQILLEMKKWFGD 190 (523)
Q Consensus 112 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~vdl~~~~~~ 190 (523)
...++. +.....+|+.|+++|+.+. +.|+.+++..+.+.+.+.+.+.+...... . +..... .+++..++..
T Consensus 89 ~~~~g~---~~~~~~~g~~w~~~r~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~-~~~l~~~~~~ 160 (491)
T 3dax_A 89 AKAFGH---RSIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSS---NSKTAAWV-TEGMYSFCYR 160 (491)
T ss_dssp HHHHTC---CCCCGGGTSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHC-------------CCE-EEEHHHHHHH
T ss_pred HHHcCC---CcccccchhHHHHHHHHHH-HhcCcccHHHHHHHHHHHHHHHHHhhccC---CcCCCCce-eccHHHHHHH
Confidence 122332 2221446889999999887 68888888888887777777766554321 1 010123 6889999999
Q ss_pred HHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Q 009899 191 LNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWI 270 (523)
Q Consensus 191 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i 270 (523)
+++++++.++||.++ .. .+.. ...+...++.+.. +...+|++....+....++..+..+.+.+.+ +
T Consensus 161 ~i~~~~~~~~fG~~~-~~---~~~~-~~~~~~~~~~~~~------~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~---~ 226 (491)
T 3dax_A 161 VMFEAGYLTIFGRDL-TR---RDTQ-KAHILNNLDNFKQ------FDKVFPALVAGLPIHMFRTAHNAREKLAESL---R 226 (491)
T ss_dssp HHHHHHHHHHHCBCS-TT---GGGH-HHHHHHHHHHHHH------HHHHHHHHHTTCCGGGSHHHHHHHHHHHHHT---S
T ss_pred HHHHHhHHHHcCccc-cc---ccch-hhhhhHHHHHHHH------HHHHhHHHHHhCCHhhhhHHHHHHHHHHHHH---H
Confidence 999999999999877 33 1111 1112222222111 1123443322111122233444444433332 2
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHH
Q 009899 271 EEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKK 349 (523)
Q Consensus 271 ~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~ 349 (523)
+++.++.+ ...|+++.+++...+.+ .+ ++++.++++.+++||+|||+++++|++++|++||++|++|++
T Consensus 227 ~~~~~~~~----~~~d~l~~ll~~~~~~~------~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~ 296 (491)
T 3dax_A 227 HENLQKRE----SISELISLRMFLNDTLS------TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATE 296 (491)
T ss_dssp HHHHTTCB----SCCHHHHHHHHHHHHHB------CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHHhhccc----chhHHHHHHHHHHHhcC------CChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHH
Confidence 22222211 45699999987654431 23 677888999999999999999999999999999999999999
Q ss_pred HHHHhhCCCC----------CCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccc----cceeeCCCCEEEEcc
Q 009899 350 ELDSVVGKER----------LLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTV----AEYHVPKGTRLVLNL 415 (523)
Q Consensus 350 Ei~~~~~~~~----------~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i----~g~~ip~g~~v~~~~ 415 (523)
||+++++.++ .++++++.+||||+|||+||||++|+ +. ++|.+.+|+++ +||.||+||.|.+++
T Consensus 297 Ei~~v~~~~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~ 374 (491)
T 3dax_A 297 EVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYP 374 (491)
T ss_dssp HHHHHHHTTTCCCCSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEEETTEEEEECTTCEEEECT
T ss_pred HHHHHhhccccccccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-cc-ceeEecCCeEeecCCCcEEeCCCCEEEech
Confidence 9999987543 35899999999999999999999975 65 59999999998 789999999999999
Q ss_pred cccccCCCCCCCCCCCCCccccCCCCCCCC------CCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCC
Q 009899 416 WKLQTDPRVWSDPLEFKPERFLTAHKDVDV------KGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPG 489 (523)
Q Consensus 416 ~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~ 489 (523)
+++|+||++|+||++|+||||+++++.... ...+..|+|||+|+|.|+|++||++|++++++.||++|+|++.+
T Consensus 375 ~~~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~ 454 (491)
T 3dax_A 375 QLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIE 454 (491)
T ss_dssp HHHHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETT
T ss_pred HhhcCCcccCCCHHHcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEcc
Confidence 999999999999999999999975432110 11356899999999999999999999999999999999999876
Q ss_pred Ccc--cccCc-CCCc-ccccCCCceEEeeccCC
Q 009899 490 EAW--VDMTG-TAGL-TNIRATPLEILLKPRLP 518 (523)
Q Consensus 490 ~~~--~~~~~-~~~~-~~~~~~~~~v~~~~r~~ 518 (523)
+.. +++.. ..++ +..|+.++.|+++-.++
T Consensus 455 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~~~ 487 (491)
T 3dax_A 455 GQAKCPPLDQSRAGLGILPPLNDIEFKYKFKHH 487 (491)
T ss_dssp TTCCCCCBCGGGTBEEECCBSSCCEEEEEECCC
T ss_pred CCCCCCCCCcccccccccCCCCCceEEEEeccc
Confidence 532 23322 1243 45677788888876543
No 25
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00 E-value=8.4e-66 Score=502.04 Aligned_cols=401 Identities=18% Similarity=0.220 Sum_probs=309.1
Q ss_pred hcCCCCCCCCCCCCCccccccc-cccCCCCchHHHHHHHHhhCCeEEEEe-cCeeEEEecCHHHHHHHHHhcccccCCCC
Q 009899 30 WSNTGKKPPEAAGKWPMIGHLH-LLAGPQLPHLALGALADKYGPLFSIRI-GVHPALVVSSWEMAKELFTKHDVDISSRP 107 (523)
Q Consensus 30 ~~~~~~~~~pgp~~~p~~G~~~-~~~~~~~~~~~~~~~~~kyG~v~~i~~-~~~~~v~v~dp~~~~~il~~~~~~~~~~~ 107 (523)
+.++.++.||||+++|++|++. .+. .+++..+.++ ++|||||++++ ++.++++|+||+++++|+.++ .|++++
T Consensus 20 ~~~~~~~~~PGP~~~p~lG~~~~~~~--~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~ 94 (436)
T 2cd8_A 20 HMRRTQQGTTASPPVLDLGALGQDFA--ADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDW 94 (436)
T ss_dssp --------------CCBHHHHHHHHH--HCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCG
T ss_pred ccchhccCCCCCCccccCCCCCcccc--cChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccc
Confidence 3444567899999999999986 444 6678899999 89999999998 778899999999999999876 366554
Q ss_pred Ccccccc----ccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccch
Q 009899 108 KLTVGKL----LGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLE 183 (523)
Q Consensus 108 ~~~~~~~----~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vd 183 (523)
....... ... ..+ ++..+|+.|+++|+++. +.|+.++++.+.+.+.+.++.+++.+.+. . ++ ++|
T Consensus 95 ~~~~~~~~~~~~~~-~~~-l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-----~--~~-~vd 163 (436)
T 2cd8_A 95 RNSTTPLTEAEAAL-NHN-MLESDPPRHTRLRKLVA-REFTMRRVELLRPRVQEIVDGLVDAMLAA-----P--DG-RAD 163 (436)
T ss_dssp GGCSSCCCTTGGGT-CCS-GGGCCTTHHHHHHHHHG-GGSSHHHHHTTHHHHHHHHHHHHHHHHTC-----T--TS-CEE
T ss_pred cccccccccccccc-ccc-ccccCchHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc-----c--CC-Ccc
Confidence 3211111 111 223 44568999999999998 89999999999999999999999998631 1 33 799
Q ss_pred HHHHH-HHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHH
Q 009899 184 MKKWF-GDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKEL 262 (523)
Q Consensus 184 l~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l 262 (523)
+..++ ..+++++++. +||.+. .+. ..+...+..++... .| ++..++.+.+
T Consensus 164 ~~~~~~~~~~~~vi~~-~~G~~~------~~~---~~~~~~~~~~~~~~--------~~-----------~~~~~~~~~~ 214 (436)
T 2cd8_A 164 LMESLAWPLPITVISE-LLGVPE------PDR---AAFRVWTDAFVFPD--------DP-----------AQAQTAMAEM 214 (436)
T ss_dssp HHHHTTTHHHHHHHHH-HHTCCG------GGH---HHHHHHHHHHHSCS--------ST-----------THHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH-HhCCCH------HHH---HHHHHHHHHHhccC--------CH-----------HHHHHHHHHH
Confidence 99977 5799999997 689876 222 24555554443210 01 3455677788
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCH
Q 009899 263 DSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNR 341 (523)
Q Consensus 263 ~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p 341 (523)
.+++.+.|+++++. ...|+++.|++...++ +..+ ++++.+++..+++||+|||+.+++|++++|++||
T Consensus 215 ~~~~~~~i~~r~~~------~~~d~l~~ll~~~~~~-----~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P 283 (436)
T 2cd8_A 215 SGYLSRLIDSKRGQ------DGEDLLSALVRTSDED-----GSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHP 283 (436)
T ss_dssp HHHHHHHHHHHTTS------CCCSHHHHHHHHHHHC-----TTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHhcC------CCCCHHHHHHHhhhcc-----CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCH
Confidence 88999999887653 3458999999876542 2245 8899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccC
Q 009899 342 RELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTD 421 (523)
Q Consensus 342 ~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d 421 (523)
++|++|++|++ |++|||+|+||++|+++..++|.+++|++++||.||+|+.|.++.+++|||
T Consensus 284 ~~~~~l~~e~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rd 345 (436)
T 2cd8_A 284 DQLAALRADMT------------------LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRT 345 (436)
T ss_dssp HHHHHHHHCGG------------------GHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTC
T ss_pred HHHHHHhhChh------------------hHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCC
Confidence 99999999853 799999999999999996669999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCC-cccccCcCC
Q 009899 422 PRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGE-AWVDMTGTA 499 (523)
Q Consensus 422 ~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~-~~~~~~~~~ 499 (523)
|++|+||++|+||||- ..++|||.|+|.|+|++||++|++++++.|+++| ++++..+ .++.+ ..
T Consensus 346 p~~~~dP~~F~PeR~~------------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~--~~ 411 (436)
T 2cd8_A 346 PERFPDPHRFDIRRDT------------AGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVW--YP 411 (436)
T ss_dssp TTTSSSTTSCCTTSCC------------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCB--CC
T ss_pred cccCCCccccCCCCCC------------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCCcccee--cc
Confidence 9999999999999961 2489999999999999999999999999999999 6998643 22333 23
Q ss_pred CcccccCCCceEEeeccCC
Q 009899 500 GLTNIRATPLEILLKPRLP 518 (523)
Q Consensus 500 ~~~~~~~~~~~v~~~~r~~ 518 (523)
+.+..+..+++|+++||++
T Consensus 412 ~~~~~~~~~l~v~~~~r~~ 430 (436)
T 2cd8_A 412 NPMIRGLKALPIRWRRGRE 430 (436)
T ss_dssp CTTBCCBSCCEEC------
T ss_pred CcccCCcceeEEEEecCcc
Confidence 4455677899999999975
No 26
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00 E-value=2.1e-65 Score=511.28 Aligned_cols=449 Identities=17% Similarity=0.179 Sum_probs=316.7
Q ss_pred CCCCCCCCCCCC-CccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCc-
Q 009899 32 NTGKKPPEAAGK-WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKL- 109 (523)
Q Consensus 32 ~~~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~- 109 (523)
.+..+.||||++ +|++||++.+. .+++.++.+++++||+||++++|+.++++|+||+++++++.++...++.++..
T Consensus 14 ~~~~~~PPgp~~~~P~iG~~~~~~--~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~ 91 (498)
T 3b6h_A 14 TRRPGEPPLDLGSIPWLGYALDFG--KDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAI 91 (498)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHHH--HCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHH
T ss_pred ccCCCCCCCCCCCCcchhhHHHhc--cCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHH
Confidence 345568999988 89999999887 56789999999999999999999999999999999999997664312222221
Q ss_pred -cccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH
Q 009899 110 -TVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF 188 (523)
Q Consensus 110 -~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~ 188 (523)
.+...++. +. +..+|+.|+ +++. +.|+.++++.+.+.+.+.+...+...... ... ... .+++..++
T Consensus 92 ~~~~~~~g~---~~-~~~~~~~~r---r~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~~~---~~~-~~~-~~~l~~~~ 158 (498)
T 3b6h_A 92 FLMERIFDV---QL-PHYSPSDEK---ARMK-LTLLHRELQALTEAMYTNLHAVLLGDATE---AGS-GWH-EMGLLDFS 158 (498)
T ss_dssp HHHHHTSCC---CC-TTCCHHHHH---HHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHHH---HCS-SCE-EEEHHHHH
T ss_pred HHHHHHcCC---Cc-cccCHHHHH---HHHH-HhhchHhHHHHHHHHHHHHHHHHhhcccc---cCC-Ccc-eecHHHHH
Confidence 11122222 22 234566664 4444 57888888888777777776666654332 111 123 57899999
Q ss_pred HHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccccccccccccccc-ccccccHHHHHHHHHHHHHHHH
Q 009899 189 GDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGW-LDIGGYEKAMKKTAKELDSLIE 267 (523)
Q Consensus 189 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~~~~~~~~~~~~~~~~l~~~~~ 267 (523)
..+++++++.++||.++ +. .+..........+.++..... .+...+|++.+ +......++..++.+.+.+.
T Consensus 159 ~~vi~~~~~~~~fG~~~-~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~-- 230 (498)
T 3b6h_A 159 YSFLLRAGYLTLYGIEA-LP---RTHESQAQDRVHSADVFHTFR--QLDRLLPKLARGSLSVGDKDHMCSVKSRLWKL-- 230 (498)
T ss_dssp HHHHHHHHHHHHHCBSC-SS---CCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHhhcCccc-cc---ccccchhhHHHhhHHHHHHHH--HHHhhHHHHHHHhcCchhhHHHHHHHHHHHHH--
Confidence 99999999999999887 33 111100112222222221110 11223443221 11111122333333333322
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHH
Q 009899 268 EWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEK 346 (523)
Q Consensus 268 ~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~ 346 (523)
+++++.++. ....|+++.+++..+++ + .+ ++++. +++.+++||++||+.+++|++++|++||++|++
T Consensus 231 -~~~~~~~~~----~~~~d~l~~ll~~~~~~-----~-~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~k 298 (498)
T 3b6h_A 231 -LSPARLARR----AHRSKWLESYLLHLEEM-----G-VSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAA 298 (498)
T ss_dssp -TCHHHHTTC----BSCCHHHHHHHHHHHHT-----T-CCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHH
T ss_pred -HHHHHHhcc----ccHHHHHHHHHHHHHhC-----C-CCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHH
Confidence 222222221 14569999999876543 1 23 56666 888899999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCC-------CChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccc-----cceeeCCCCEEEEc
Q 009899 347 VKKELDSVVGKERL-------LCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTV-----AEYHVPKGTRLVLN 414 (523)
Q Consensus 347 l~~Ei~~~~~~~~~-------~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i-----~g~~ip~g~~v~~~ 414 (523)
|++|++++++.++. ++.+++.+||||+|||+||||++|+ +. ++|.+.+|+++ +||.||+|+.|.++
T Consensus 299 l~~Ei~~v~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~ 376 (498)
T 3b6h_A 299 VRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PF-ITREVVVDLAMPMADGREFNLRRGDRLLLF 376 (498)
T ss_dssp HHHHHHHHHHC----------CCTHHHHSCHHHHHHHHHHHHHHBC-BC-EEEEECSCEEEECTTSCEEEECTTCEEEEC
T ss_pred HHHHHHHHhcccCCCCCcccccCHHHHhcCHHHHHHHHHHHhccCC-Cc-ceeeecCCeeeecCCCCeEEeCCCCEEEeC
Confidence 99999999876442 5899999999999999999999985 54 59999999887 78999999999999
Q ss_pred ccc-cccCCCCCCCCCCCCCccccCCCCCCCC------CCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceec
Q 009899 415 LWK-LQTDPRVWSDPLEFKPERFLTAHKDVDV------KGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDIST 487 (523)
Q Consensus 415 ~~~-~~~d~~~~~~p~~F~P~R~l~~~~~~~~------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~ 487 (523)
+++ +|+||++|+||++|+||||++.++.... ...+..++|||+|+|.|+|++||++|++++++.|+++||+++
T Consensus 377 ~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~ 456 (498)
T 3b6h_A 377 PFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLEL 456 (498)
T ss_dssp TCCCCCTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred chHhhcCCccccCChhhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEe
Confidence 999 9999999999999999999975432110 113568999999999999999999999999999999999998
Q ss_pred CCCc--ccccCc-CCCc-ccccCCCceEEeeccC
Q 009899 488 PGEA--WVDMTG-TAGL-TNIRATPLEILLKPRL 517 (523)
Q Consensus 488 ~~~~--~~~~~~-~~~~-~~~~~~~~~v~~~~r~ 517 (523)
+++. .+++.. ..+. +..|+.+++|++++|-
T Consensus 457 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 490 (498)
T 3b6h_A 457 INADVEIPEFDLSRYGFGLMQPEHDVPVRYRIRP 490 (498)
T ss_dssp SSTTCCCCCBCGGGTBSSBCCBSSCCEEEEEECC
T ss_pred CCCCCCCCCCCccccccccCCCCCCccEEEEecc
Confidence 7653 122221 1233 4567778999888874
No 27
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00 E-value=6e-64 Score=488.09 Aligned_cols=401 Identities=17% Similarity=0.237 Sum_probs=316.0
Q ss_pred CccccccccccCCCCchHHHHHHHHhhC-CeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc--c-cccccCCC
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYG-PLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT--V-GKLLGHNY 119 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG-~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~--~-~~~~~~~~ 119 (523)
.|++||+..+. .+++.++.+++++|| |||++++++.+.++|++|++++.++. . ..|+..+... . ...++ .
T Consensus 8 ~P~lG~~~~~~--~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~g--~ 81 (417)
T 1izo_A 8 DKSLDNSLTLL--KEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQKSLFG--V 81 (417)
T ss_dssp CCCTTHHHHHH--HHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHTTTTC--T
T ss_pred CCccchHHHHh--hCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-c-cccccccccccchhhhhcc--c
Confidence 48999999987 778999999999998 99999998999999999999986543 3 2344332211 1 11222 1
Q ss_pred cceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHHHHHHHH
Q 009899 120 ANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMM 199 (523)
Q Consensus 120 ~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~ 199 (523)
+.++..+|+.|+++|+++. +.|++++++.+.+.+.+.++++++.+.+ ++ ++|+.+++..+++++++.+
T Consensus 82 -~~l~~~dg~~h~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~---------~~-~~dl~~~~~~~~~~vi~~~ 149 (417)
T 1izo_A 82 -NAIQGMDGSAHIHRKMLFL-SLMTPPHQKRLAELMTEEWKAAVTRWEK---------AD-EVVLFEEAKEILCRVACYW 149 (417)
T ss_dssp -TCGGGCCHHHHHHHHHHHH-HTSSHHHHHHHHHHHHHHHHHHHHHHTT---------SS-EEEHHHHHHHHHHHHHHHH
T ss_pred -cceeecCChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHhc---------CC-CeeHHHHHHHHHHHHHHHH
Confidence 2345668999999999998 8999999999999999999999988743 33 7999999999999999998
Q ss_pred HhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 009899 200 IAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKES 279 (523)
Q Consensus 200 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 279 (523)
||.++ +. .+ ...+...+..+...... ..| ...+..++.+.+.+++.+.|+++++....
T Consensus 150 -~G~~~-~~-----~~-~~~~~~~~~~~~~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~i~~r~~~~~~ 207 (417)
T 1izo_A 150 -AGVPL-KE-----TE-VKERADDFIDMVDAFGA-----VGP---------RHWKGRRARPRAEEWIEVMIEDARAGLLK 207 (417)
T ss_dssp -HTCCC-CT-----TT-HHHHHHHHHHHHHHTTC-----CSH---------HHHHHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred -cCCCC-Cc-----hH-HHHHHHHHHHHHhhccc-----CCc---------cchhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 69887 32 11 13444444333321110 011 12345567788899999999988875332
Q ss_pred CCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCC
Q 009899 280 GANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKE 358 (523)
Q Consensus 280 ~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~ 358 (523)
. ...|+++.|++..+++ +..+ ++++..++..+ +||++||+.+++|++++|++||++|++|++|
T Consensus 208 ~--~~~d~l~~ll~~~~~~-----g~~l~~~~~~~~~~~~-~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E-------- 271 (417)
T 1izo_A 208 T--TSGTALHEMAFHTQED-----GSQLDSRMAAIELINV-LRPIVAISYFLVFSALALHEHPKYKEWLRSG-------- 271 (417)
T ss_dssp C--CTTSHHHHHHHCBCTT-----SCBCCHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC--------
T ss_pred C--CcCCHHHHHHHhcccc-----CCCCCHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhhCHHHHHHHHhc--------
Confidence 2 4568999999764332 2234 66666666554 5999999999999999999999999999997
Q ss_pred CCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccC
Q 009899 359 RLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLT 438 (523)
Q Consensus 359 ~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~ 438 (523)
++||++|||+|+||++|+++. ++|.+++|++++|+.||+|+.|.++.+++||||++|+||++|+||||++
T Consensus 272 ---------~~~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~ 341 (417)
T 1izo_A 272 ---------NSREREMFVQEVRRYYPFGPF-LGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAE 341 (417)
T ss_dssp ---------CHHHHHHHHHHHHHHSCCCCE-EEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTT
T ss_pred ---------CCHHHHHHHHHHhhcCCcccc-cceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCC
Confidence 468999999999999999997 5999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCCCCcccccccCCC----CCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCCceEEee
Q 009899 439 AHKDVDVKGQHFELLPFGGG----RRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATPLEILLK 514 (523)
Q Consensus 439 ~~~~~~~~~~~~~~~~Fg~G----~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 514 (523)
.+ ..+..++|||+| +|.|+|++||++|++++++.|+++|++++++++ ..+. ...++..|+++++|+++
T Consensus 342 ~~------~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~-~~~~-~~~~~~~p~~~~~~~~~ 413 (417)
T 1izo_A 342 RE------ENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQS-LHYS-LARMPSLPESGFVMSGI 413 (417)
T ss_dssp CC------CCSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCC-CCCC-SSSSSCCCTTCCEEEEE
T ss_pred CC------CCCcceeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCC-cCcc-cccCCCCCCCCceEeee
Confidence 53 245679999999 599999999999999999999999999987642 2222 23466778899999999
Q ss_pred ccCC
Q 009899 515 PRLP 518 (523)
Q Consensus 515 ~r~~ 518 (523)
+|.+
T Consensus 414 ~r~~ 417 (417)
T 1izo_A 414 RRKS 417 (417)
T ss_dssp EEC-
T ss_pred eCCC
Confidence 9964
No 28
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00 E-value=4.7e-65 Score=506.02 Aligned_cols=438 Identities=18% Similarity=0.216 Sum_probs=304.6
Q ss_pred CCCCCCCCCCCC-CccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCc-
Q 009899 32 NTGKKPPEAAGK-WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKL- 109 (523)
Q Consensus 32 ~~~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~- 109 (523)
+.+.+.||||++ +|++||++.+. .+++.++.+++++|||||++++|+.++++|+||+++++|+.++.. ++..+..
T Consensus 14 ~~~~~~pPgp~~~~P~iG~~~~~~--~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~ 90 (475)
T 3b98_A 14 TRRRNEPPLDKGMIPWLGHALEFG--KDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQ 90 (475)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHHH--HCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHH
T ss_pred ccCCCCCCCCCCCcchHHhHHHHh--hCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHH
Confidence 345578999998 99999999887 678999999999999999999999999999999999999976542 3222111
Q ss_pred -cccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH
Q 009899 110 -TVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF 188 (523)
Q Consensus 110 -~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~ 188 (523)
.+...++. +. +..+|+.| |+++. +.|+.++++.+.+.+.+.+..+++.+... .+..... .+++..++
T Consensus 91 ~~~~~~~g~---~~-~~~~~~~~---R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~---~~~~~~~-~~~~~~~~ 158 (475)
T 3b98_A 91 VLMKRIFNM---IL-PSHNPESE---KKRAE-MHFQGASLTQLSNSMQNNLRLLMTPSEMG---LKTSEWK-KDGLFNLC 158 (475)
T ss_dssp HHHHHTTCC---CC-TTCCHHHH---HHHHH-HHTSHHHHHHHHHHHHHHHHHHSSTTTTT---CSSCSCE-EEEHHHHH
T ss_pred HHHHHHhCC---CC-CCCChHHH---HHHHH-HHcChhhHHHHHHHHHHHHHHHHhhcccc---cCCCCce-eehHHHHH
Confidence 11122221 22 23456655 55665 68999999999998888888877765332 1010122 57888888
Q ss_pred HHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhcccccccccccccccc-ccccccHHHHHHHHHHHHHHHH
Q 009899 189 GDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGW-LDIGGYEKAMKKTAKELDSLIE 267 (523)
Q Consensus 189 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~~~~~~~~~~~~~~~~l~~~~~ 267 (523)
..+++++++...||.+. .+...+..+...+..+ ...+|++.+ +......+...++.+.+.
T Consensus 159 ~~~~~~~~~~~~~g~~~------~~~~~~~~~~~~~~~~---------~~~~p~l~~~~~~~~~~~~~~~~~~~~~---- 219 (475)
T 3b98_A 159 YSLLFKTGYLTVFGAEN------NNSAALTQIYEEFRRF---------DKLLPKLARTTVNKEEKQIASAAREKLW---- 219 (475)
T ss_dssp HHHHHHHHHHHHHCCTT------SCHHHHHHHHHHHHHH---------HHHHHHHHTTCCCHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHhhhheeCCcc------ccchhcHHHHHHHHHH---------HhhhHHHHHHhcChhhhHHHHHHHHHHH----
Confidence 88888888777777542 2222122333222221 112332211 101111122222222222
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHH
Q 009899 268 EWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEK 346 (523)
Q Consensus 268 ~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~ 346 (523)
+.+.+... +.. ....|+++.+++...++ + .+ ++++. +++.+++||+|||+.+++|++++|++||++|++
T Consensus 220 ~~~~~~~~--~~~-~~~~d~l~~ll~~~~~~-----~-~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~ 289 (475)
T 3b98_A 220 KWLTPSGL--DRK-PREQSWLGSYVKQLQDE-----G-IDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRA 289 (475)
T ss_dssp HHHSCTTS--CCC-CCTTSHHHHHHHHHHHT-----T-CCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHh--hcc-ccccHHHHHHHHHHHHc-----C-CCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHH
Confidence 22211111 111 24579999999875543 1 34 66777 899999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccc-----cceeeCCCCEEEEcccc-ccc
Q 009899 347 VKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTV-----AEYHVPKGTRLVLNLWK-LQT 420 (523)
Q Consensus 347 l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i-----~g~~ip~g~~v~~~~~~-~~~ 420 (523)
|++|++. + ++.++.+++.+||||+|||+|+||++|+ +. ++|.+++|+++ +||.||+|+.|++++++ +||
T Consensus 290 l~~Ei~~--~-~~~~~~~~~~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~r 364 (475)
T 3b98_A 290 VREEIQG--G-KHLRLEERQKNTPVFDSVLWETLRLTAA-AL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQM 364 (475)
T ss_dssp HHHHHC---------------CCHHHHHHHHHHHHHHEE-EC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCT
T ss_pred HHHHHhc--C-CCCCCHHHHhcCHHHHHHHHHHHhcCCc-cc-eeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcC
Confidence 9999992 2 3346899999999999999999999986 65 59999999998 89999999999999999 999
Q ss_pred CCCCCCCCCCCCCccccCCCCCCC------CCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcc--
Q 009899 421 DPRVWSDPLEFKPERFLTAHKDVD------VKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAW-- 492 (523)
Q Consensus 421 d~~~~~~p~~F~P~R~l~~~~~~~------~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~-- 492 (523)
||++|+||++|+||||++.++..+ ....+..++|||+|+|.|+|++||++|++++++.|+++|+++++++.+
T Consensus 365 dp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~ 444 (475)
T 3b98_A 365 DPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATV 444 (475)
T ss_dssp CTTTSSSTTSCCTTTTBCTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCC
T ss_pred ChhhcCCcccCCcchhcCCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCC
Confidence 999999999999999997543211 011356899999999999999999999999999999999999877531
Q ss_pred cccCc--CCCcccccCCCceEEeeccCC
Q 009899 493 VDMTG--TAGLTNIRATPLEILLKPRLP 518 (523)
Q Consensus 493 ~~~~~--~~~~~~~~~~~~~v~~~~r~~ 518 (523)
+++.. ....+..|+.+++|++++|+.
T Consensus 445 ~~~~~~~~~~~~~~p~~~~~~~~~~R~~ 472 (475)
T 3b98_A 445 PLVDPSRYGFGILQPAGDLEIRYRIRFH 472 (475)
T ss_dssp CCBCGGGTBEEECCBSSCCEEEEEEC--
T ss_pred CCCCcccccccccCCCCCceEEEEeccc
Confidence 22221 222355677899999999964
No 29
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00 E-value=7e-63 Score=477.57 Aligned_cols=384 Identities=15% Similarity=0.215 Sum_probs=308.0
Q ss_pred CCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEE----e-cC-eeEEEecCHHHHHHHH-HhcccccCCCC
Q 009899 35 KKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIR----I-GV-HPALVVSSWEMAKELF-TKHDVDISSRP 107 (523)
Q Consensus 35 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~----~-~~-~~~v~v~dp~~~~~il-~~~~~~~~~~~ 107 (523)
.+.||||+++|+. +. .+++..+.++ ++|||||+++ + ++ .++++|+||+++++|+ .++ . +++++
T Consensus 9 ~~lppgp~~~p~~-----~~--~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~-~-~~~~~ 78 (406)
T 1ued_A 9 APLLREPANFQLR-----TN--CDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE-H-FTTRP 78 (406)
T ss_dssp CCEEECCTTTTCE-----ET--TEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS-S-EECCC
T ss_pred CCCcccCcccCCC-----CC--CCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc-c-ccccc
Confidence 4578999999987 33 6678899999 9999999999 6 78 8999999999999999 544 2 44444
Q ss_pred Ccccc--ccc-cC-CCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccch
Q 009899 108 KLTVG--KLL-GH-NYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLE 183 (523)
Q Consensus 108 ~~~~~--~~~-~~-~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vd 183 (523)
..... ... .. ...+ ++..+|+.|+++|+++. +.|+.++++.+.+.+.+.++++++.+... |+ ++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~-l~~~~g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------g~-~~d 147 (406)
T 1ued_A 79 QFTQSKSGAHVEAQFVGQ-ISTYDPPEHTRLRKMLT-PEFTVRRIRRMEPAIQSLIDDRLDLLEAE--------GP-SAD 147 (406)
T ss_dssp CC---------CGGGTTC-GGGCCTTHHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHHH--------CT-TEE
T ss_pred cccccccccccccccccc-cccCCCHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-Cee
Confidence 31111 111 00 1113 45568999999999998 89999999999999999999999999753 44 799
Q ss_pred HHHHHHH-HHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHH
Q 009899 184 MKKWFGD-LNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKEL 262 (523)
Q Consensus 184 l~~~~~~-~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l 262 (523)
+..++.. +++++++ .+||.+. .+. ..+...+..++.. . ...++..++.+.+
T Consensus 148 ~~~~~~~~~~~~vi~-~~~G~~~------~~~---~~~~~~~~~~~~~--------~----------~~~~~~~~~~~~~ 199 (406)
T 1ued_A 148 LQGLFADPVGAHALC-ELLGIPR------DDQ---REFVRRIRRNADL--------S----------RGLKARAADSAAF 199 (406)
T ss_dssp HHHHTHHHHHHHHHH-HHHTCCH------HHH---HHHHHHHHHCC---------------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHH-HHcCCCH------HHH---HHHHHHHHHHHhc--------c----------CCHHHHHHHHHHH
Confidence 9998875 9999999 5788765 222 2444444443220 0 0124566777888
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCH
Q 009899 263 DSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNR 341 (523)
Q Consensus 263 ~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p 341 (523)
.+++.+.|+++++. ...|+++.|++.. .. .+ ++++.+++..+++||+|||+.+++|++++|++||
T Consensus 200 ~~~~~~~i~~r~~~------~~~d~l~~ll~~~-~~-------~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P 265 (406)
T 1ued_A 200 NRYLDNLLARQRAD------PDDGLLGMIVRDH-GD-------NVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNP 265 (406)
T ss_dssp HHHHHHHHHHHHHS------CCSSHHHHHHHHH-GG-------GSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhC------CCCCHHHHHHHhc-CC-------CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCh
Confidence 89999999887753 3468999999864 21 34 7889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccC
Q 009899 342 RELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTD 421 (523)
Q Consensus 342 ~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d 421 (523)
++|++|++|++ |++|||+|+||++|+++..++|.+++|++++||.||+|+.|.++.+++|||
T Consensus 266 ~~~~~l~~e~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rd 327 (406)
T 1ued_A 266 GQIELLFESPE------------------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRD 327 (406)
T ss_dssp GGTTHHHHCHH------------------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTC
T ss_pred HHHHHHHhCHH------------------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCC
Confidence 99999999875 699999999999999997669999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCC
Q 009899 422 PRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAG 500 (523)
Q Consensus 422 ~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~ 500 (523)
|++|+||++|+||||- ..++|||.|+|.|+|++||++|++++++.|+++| ++++..+.+ ++....+
T Consensus 328 p~~~~dp~~F~PeR~~------------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~ 394 (406)
T 1ued_A 328 EALTPDPDVLDANRAA------------VSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIE-EVKYRSA 394 (406)
T ss_dssp TTTSSSTTSCCTTSCC------------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GCCBCCS
T ss_pred chhCCChhhcCCCCCC------------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCcc-ccccccc
Confidence 9999999999999981 2479999999999999999999999999999999 799875422 2333445
Q ss_pred cccccCCCceEEe
Q 009899 501 LTNIRATPLEILL 513 (523)
Q Consensus 501 ~~~~~~~~~~v~~ 513 (523)
.+.++ .+++|++
T Consensus 395 ~~~~~-~~lpv~~ 406 (406)
T 1ued_A 395 FVDCP-DQVPVTW 406 (406)
T ss_dssp SSCCB-SCCEEEC
T ss_pred ccccC-CeeeeeC
Confidence 56677 8888864
No 30
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00 E-value=1.9e-62 Score=477.17 Aligned_cols=401 Identities=16% Similarity=0.207 Sum_probs=314.3
Q ss_pred CCCCCCCccccccccccCCCCchHHHHHHHHhh-CCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc--c-cc
Q 009899 38 PEAAGKWPMIGHLHLLAGPQLPHLALGALADKY-GPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT--V-GK 113 (523)
Q Consensus 38 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~ky-G~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~--~-~~ 113 (523)
|||| |++||++.+. .+++.++.+++++| ||||++.+++.+.+++++|+.++ ++.++ ..|++.+... . ..
T Consensus 4 pPg~---P~iG~~~~~~--~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~ 76 (415)
T 3awm_A 4 TPHT---KGPDETLSLL--ADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKT 76 (415)
T ss_dssp --------CCCCHHHHH--HSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTT
T ss_pred CCCC---CccchHHHHH--hChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhh
Confidence 5665 8999999887 67899999999999 79999999888999999999987 66554 3454443221 1 11
Q ss_pred cccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHH
Q 009899 114 LLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNL 193 (523)
Q Consensus 114 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~ 193 (523)
.++ . ..++..+|+.|+++|+++. +.|++++++.+.+.+.+.++++++.+.+. + ++|+.+++..+++
T Consensus 77 ~~g--~-~~l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~~~~~--------~--~vdl~~~~~~~~~ 142 (415)
T 3awm_A 77 LLG--Q-GGVQGLDGETHRHRKQMFM-GLMTPERVRALAQLFEAEWRRAVPGWTRK--------G--EIVFYDELHEPLT 142 (415)
T ss_dssp TSC--S-SSGGGCCHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHHHHH--------S--EEEHHHHHHHHHH
T ss_pred ccC--C-cceeecCcHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHhhccC--------C--cEeHHHHHHHHHH
Confidence 222 1 2245668999999999997 89999999999999999999999998652 3 6999999999999
Q ss_pred HHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009899 194 NVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEH 273 (523)
Q Consensus 194 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 273 (523)
++++.+ ||.++ +. .+ +..+...+..+...... .. ....+..++.+.+.+++.+.|+++
T Consensus 143 ~vi~~~-~G~~~-~~-----~~-~~~~~~~~~~~~~~~~~-----~~---------~~~~~~~~~~~~~~~~~~~~i~~r 200 (415)
T 3awm_A 143 RAVCAW-AGVPL-PD-----DE-AGNRAGELRALFDAAGS-----AS---------PRHLWSRLARRRVDAWAKRIIEGI 200 (415)
T ss_dssp HHHHHH-HTCCC-CG-----GG-HHHHHHHHHHHHHSTTC-----SS---------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-cCCCC-Cc-----ch-HHHHHHHHHHHHHHhcc-----cC---------chHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 89887 32 11 13444444333321110 00 113445677888999999999988
Q ss_pred HhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 009899 274 RRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELD 352 (523)
Q Consensus 274 ~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~ 352 (523)
++..... ...|+++.|++..+++ +..+ ++++..++..+ +||++||+.+++|++++|++||++|++|++|
T Consensus 201 ~~~~~~~--~~~d~l~~ll~~~~~~-----g~~~~~~~~~~~~~~~-~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e-- 270 (415)
T 3awm_A 201 RAGSIGS--GSGTAAYAIAWHRDRH-----DDLLSPHVAAVELVNV-LRPTVAIAVYITFVAHALQTCSGIRAALVQQ-- 270 (415)
T ss_dssp HHTSSCC--CTTSHHHHHHHCBCTT-----SCBCCHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHSTTHHHHHHHC--
T ss_pred HHhhhcC--CCCCHHHHHHhhhhcc-----CCCCCHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHhChHHHHHHHHH--
Confidence 7653222 4568999999764332 2234 66676666655 5999999999999999999999999999996
Q ss_pred HhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCC
Q 009899 353 SVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFK 432 (523)
Q Consensus 353 ~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~ 432 (523)
+||++|||+|+||++|+++. ++|.+++|++++|+.||+|+.|.++.+++||||++|+||++|+
T Consensus 271 ----------------~~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~ 333 (415)
T 3awm_A 271 ----------------PDYAELFVQEVRRFYPFFPA-VVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFR 333 (415)
T ss_dssp ----------------TTHHHHHHHHHHHHSCCSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCC
T ss_pred ----------------HHHHHHHHHHHhhcCCCccc-cceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccC
Confidence 47999999999999999997 5999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCCCCCCcccccccCCC----CCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCC
Q 009899 433 PERFLTAHKDVDVKGQHFELLPFGGG----RRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATP 508 (523)
Q Consensus 433 P~R~l~~~~~~~~~~~~~~~~~Fg~G----~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (523)
|+||++.+ ..+..++|||+| +|.|+|++||++|++++++.|+++|+++++++. ..+. ...++..|+++
T Consensus 334 P~R~~~~~------~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~~~~-~~~~~~~p~~~ 405 (415)
T 3awm_A 334 PERFRAWD------EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQD-LSID-FARLPALPKSG 405 (415)
T ss_dssp GGGGGGCC------CCSSSCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCC-CCBC-TTSSSCCBTTC
T ss_pred hhhcCCCC------CCCCCccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCC-CCcC-cCCCccccCCC
Confidence 99998654 145679999999 599999999999999999999999999987642 2232 24567778899
Q ss_pred ceEEeecc
Q 009899 509 LEILLKPR 516 (523)
Q Consensus 509 ~~v~~~~r 516 (523)
++|++++.
T Consensus 406 ~~~~~~~~ 413 (415)
T 3awm_A 406 FVMRNVHI 413 (415)
T ss_dssp CEEEEEES
T ss_pred ceEEEEeC
Confidence 99999854
No 31
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00 E-value=7.2e-62 Score=471.42 Aligned_cols=373 Identities=14% Similarity=0.138 Sum_probs=296.2
Q ss_pred CCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEec-CeeEEEecCHHHHHHHHHhcc-cccCCCCCcccccc
Q 009899 37 PPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG-VHPALVVSSWEMAKELFTKHD-VDISSRPKLTVGKL 114 (523)
Q Consensus 37 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-~~~~v~v~dp~~~~~il~~~~-~~~~~~~~~~~~~~ 114 (523)
.||||+++|++|++.. +++..+.+++ +||||+++.++ +.+.++|++++.+++++.++. ..+..++.......
T Consensus 2 ~pPGp~~~P~~g~~~~-----~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~ 75 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP-----EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSA 75 (404)
T ss_dssp ----CCBSSCCCSSTT-----SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSH
T ss_pred CCCCCCCCCCCCCcCC-----CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccc
Confidence 4899999999999763 5677888886 69999999874 566778999999999998763 22333333221110
Q ss_pred ----ccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHH
Q 009899 115 ----LGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGD 190 (523)
Q Consensus 115 ----~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~ 190 (523)
...+.. .++..+|+.|+++|+++. +.|+.++++.+++.+.+.++++++.+.+. ..+ ++ ++|+...+..
T Consensus 76 ~~~~~~~~~~-~l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~---~~~--~~-~~d~~~~~~~ 147 (404)
T 1jfb_A 76 SGKQAAKAKP-TFVDMDPPEHMHQRSMVE-PTFTPEAVKNLQPYIQRTVDDLLEQMKQK---GCA--NG-PVDLVKEFAL 147 (404)
T ss_dssp HHHHHTTSCC-CGGGCCTTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHH---CST--TS-CEEHHHHTTT
T ss_pred cccchhcccC-cccccCchhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhc---CCC--CC-CccHHHHHHH
Confidence 111222 244567999999999997 89999999999999999999999999775 322 44 7999999999
Q ss_pred HHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Q 009899 191 LNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWI 270 (523)
Q Consensus 191 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i 270 (523)
.+.++++..+||.+. ++.+ +......... .+ . ...++..++.+.+.+++.+.|
T Consensus 148 ~~~~~i~~~~~G~~~------~~~~----~~~~~~~~~~-----------~~---~---~~~~~~~~~~~~~~~~~~~~i 200 (404)
T 1jfb_A 148 PVPSYIIYTLLGVPF------NDLE----YLTQQNAIRT-----------NG---S---STAREASAANQELLDYLAILV 200 (404)
T ss_dssp HHHHHHHHHHHTCCG------GGHH----HHHHHHHHHH-----------CT---T---SCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCH------HHHH----HHHHHHHHHh-----------cc---C---cchHHHHHHHHHHHHHHHHHH
Confidence 999999999999877 2222 2222211111 00 0 113455667788889999999
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHH
Q 009899 271 EEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKK 349 (523)
Q Consensus 271 ~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~ 349 (523)
+++++. ...|+++.|++...++ ..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++
T Consensus 201 ~~r~~~------~~~d~l~~ll~~~~~~------~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~ 268 (404)
T 1jfb_A 201 EQRLVE------PKDDIISKLCTEQVKP------GNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKA 268 (404)
T ss_dssp HHHHHS------CCSSHHHHHHHHTTTT------TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHHHhC------CCCcHHHHHHHhhccC------CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHh
Confidence 887754 3458999999754322 245 889999999999999999999999999999999999999998
Q ss_pred HHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCC
Q 009899 350 ELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPL 429 (523)
Q Consensus 350 Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~ 429 (523)
+ .+|++|||+|+||++|+++..++|.+++|++++||.||+|+.|.++.+++||||++|+||+
T Consensus 269 ~------------------~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~ 330 (404)
T 1jfb_A 269 N------------------PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPD 330 (404)
T ss_dssp C------------------GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTT
T ss_pred C------------------hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChh
Confidence 2 2699999999999999999666999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCC
Q 009899 430 EFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGE 490 (523)
Q Consensus 430 ~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~ 490 (523)
+|+||||+++. .++|||.|+|.|+|++||++|++++++.|+++| ++++..+
T Consensus 331 ~F~PeRf~~~~----------~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 382 (404)
T 1jfb_A 331 EFNMNRKWPPQ----------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP 382 (404)
T ss_dssp SCCTTCCCCSS----------CCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred hcCCCCCCCCC----------CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence 99999997532 389999999999999999999999999999999 7998654
No 32
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00 E-value=1.4e-63 Score=480.39 Aligned_cols=382 Identities=21% Similarity=0.244 Sum_probs=300.1
Q ss_pred CCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCC-Ccc-ccccccC
Q 009899 40 AAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRP-KLT-VGKLLGH 117 (523)
Q Consensus 40 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~-~~~-~~~~~~~ 117 (523)
++..+|++||++.+. .+++.++.+++++|||||+ ++++.++++|+||+++++|+.++ .|++++ ... .....+
T Consensus 3 ~~~~~p~iGnl~~~~--~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~g- 76 (389)
T 1n97_A 3 RLSLREAWPYLKDLQ--QDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLTG- 76 (389)
T ss_dssp ECCHHHHHHHHHHHH--HCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHHC-
T ss_pred ccccccccccHHHHh--hChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHhC-
Confidence 455689999999886 6688999999999999999 99999999999999999999876 566665 221 112222
Q ss_pred CCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHHHHHH
Q 009899 118 NYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVIL 197 (523)
Q Consensus 118 ~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~ 197 (523)
.+ ++..+|+.|+++|+++. +.|++++++.+++.+.+.++++++.+. ++ ++|+.+++..+++|+++
T Consensus 77 --~~-l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~----------~~-~~dl~~~~~~~~~~vi~ 141 (389)
T 1n97_A 77 --RG-LLTDWGESWKEARKALK-DPFLPKNVRGYREAMEEEARAFFGEWR----------GE-ERDLDHEMLALSLRLLG 141 (389)
T ss_dssp --SS-TTTCCHHHHHHHHHHHC-GGGSHHHHHTTHHHHHHHHHHHHHTCC----------SC-CEEHHHHHHHHHHHHHH
T ss_pred --Cc-cccCCcHHHHHHHHHhC-cccCHHHHHHHHHHHHHHHHHHHHHcc----------CC-cCcHHHHHHHHHHHHHH
Confidence 23 34557999999999997 899999999999999999998887763 22 79999999999999999
Q ss_pred HHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009899 198 MMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKK 277 (523)
Q Consensus 198 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~ 277 (523)
.++||.++ + + ++.+.+..+...... . .++++.+++ ....++..++.+.+.+++.+.++++
T Consensus 142 ~~~fG~~~-~-----~-----~~~~~~~~~~~~~~~-~---~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~i~~r---- 201 (389)
T 1n97_A 142 RALFGKPL-S-----P-----SLAEHALKALDRIMA-Q---TRSPLALLD-LAAEARFRKDRGALYREAEALIVHP---- 201 (389)
T ss_dssp HHHHSSCC-C-----H-----HHHHHHHHHHHHHHH-H---HHCGGGGGC-HHHHHHHHHHHHHHHHHHGGGTTST----
T ss_pred HHHcCCcc-h-----H-----HHHHHHHHHHHHHHH-H---HhhHHHhcC-CchhHHHHHHHHHHHHHHHHHHHHH----
Confidence 99999987 2 1 222333332221110 0 011112221 1122334444445555444443211
Q ss_pred cCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhC
Q 009899 278 ESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVG 356 (523)
Q Consensus 278 ~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~ 356 (523)
|+ . .+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++.+.
T Consensus 202 -------------ll-----~-------~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~- 255 (389)
T 1n97_A 202 -------------PL-----S-------HLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL- 255 (389)
T ss_dssp -------------TG-----G-------GSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH-
T ss_pred -------------hc-----c-------cCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-
Confidence 22 1 23 778999999999999999999999999999999999999999999763
Q ss_pred CCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccc
Q 009899 357 KERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERF 436 (523)
Q Consensus 357 ~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~ 436 (523)
|||+|+||++|+++.. +|.+++|++++||.||+|+.|.++.+++||| +|+||++|+||||
T Consensus 256 -----------------a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~ 315 (389)
T 1n97_A 256 -----------------AAFQEALRLYPPAWIL-TRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERF 315 (389)
T ss_dssp -----------------HHHHHHHHHSCSSCCE-EEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHH
T ss_pred -----------------HHHHHHHhcCCCcccc-ceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccC
Confidence 8999999999999985 9999999999999999999999999999999 9999999999999
Q ss_pred cCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcceecCCCcccccCcCCCcccccCCCceEEeecc
Q 009899 437 LTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFDISTPGEAWVDMTGTAGLTNIRATPLEILLKPR 516 (523)
Q Consensus 437 l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r 516 (523)
+++. ...+..++|||.|+|.|+|++||++|++++++.|+++|++++.++.++ ..+++..|+.+++|+++||
T Consensus 316 l~~~-----~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~----~~~~~~~p~~~~~v~~~~~ 386 (389)
T 1n97_A 316 LEER-----GTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRV----LAQVTLRPEGGLPARPREE 386 (389)
T ss_dssp HHSC-----CCCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCCE----EESSSEEETTCCEECCBC-
T ss_pred CCCC-----CCCCCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCcc----cceEEeeeCCCceEEEeec
Confidence 8652 124567999999999999999999999999999999999998765432 4566777888999999987
Q ss_pred C
Q 009899 517 L 517 (523)
Q Consensus 517 ~ 517 (523)
-
T Consensus 387 ~ 387 (389)
T 1n97_A 387 V 387 (389)
T ss_dssp -
T ss_pred c
Confidence 4
No 33
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00 E-value=1.3e-60 Score=462.69 Aligned_cols=391 Identities=16% Similarity=0.187 Sum_probs=306.9
Q ss_pred CCCCCCCCCccccccccccCCCCchHHHHHHHHhh-CCeEEEEe-cCeeEEEecCHHHHHHHHHhcccccCCCCCccccc
Q 009899 36 KPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKY-GPLFSIRI-GVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGK 113 (523)
Q Consensus 36 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~ky-G~v~~i~~-~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~ 113 (523)
..||+|+++|.+.....+. .+++..+.++ ++| ||||++++ ++.+.++|+||+++++|+.++. +++++......
T Consensus 5 ~~~~~~~~~P~~~~~~~~~--~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~ 79 (412)
T 2zbx_A 5 ATTPQTTDAPAFPSNRSCP--YQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFP 79 (412)
T ss_dssp ---CCCCSSCBSSCCCSST--TSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSC
T ss_pred CCCCCCCCCCCCCCCchhc--cChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCccccccc
Confidence 3567777777663333444 6788999999 788 99999997 8899999999999999998653 34443211111
Q ss_pred cc-----cC--CCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHH
Q 009899 114 LL-----GH--NYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKK 186 (523)
Q Consensus 114 ~~-----~~--~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~ 186 (523)
.. +. ...+ ++..+|+.|+++|+++. +.|+.++++.+++.+.+.++.+++.+... |+ ++|+..
T Consensus 80 ~~~~~~~~~~~~~~~-l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------g~-~~d~~~ 148 (412)
T 2zbx_A 80 ATSPRFEAVRESPQA-FIGLDPPEHGTRRRMTI-SEFTVKRIKGMRPEVEEVVHGFLDEMLAA--------GP-TADLVS 148 (412)
T ss_dssp CCSGGGC----CCCC-GGGCCTTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHH--------CS-CEEHHH
T ss_pred ccccccccccccccc-cccCCcHHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CccHHH
Confidence 00 00 1113 45568999999999998 78999999999999999999999999753 44 799999
Q ss_pred HHH-HHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHH
Q 009899 187 WFG-DLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSL 265 (523)
Q Consensus 187 ~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~ 265 (523)
.+. .+++++++. +||.+. .+. ..+...+..++.. + .. ++..++.+.+.++
T Consensus 149 ~~~~~~~~~vi~~-~~G~~~------~~~---~~~~~~~~~~~~~----------~--------~~-~~~~~~~~~~~~~ 199 (412)
T 2zbx_A 149 QFALPVPSMVICR-LLGVPY------ADH---EFFQDASKRLVQS----------T--------DA-QSALTARNDLAGY 199 (412)
T ss_dssp HTTTHHHHHHHHH-HHTCCG------GGH---HHHHHHHHHHHHC----------S--------SH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HcCCCH------HHH---HHHHHHHHHHhcc----------C--------cH-HHHHHHHHHHHHH
Confidence 886 489999996 789876 222 2444444443321 0 01 4556677888899
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHH
Q 009899 266 IEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRREL 344 (523)
Q Consensus 266 ~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~ 344 (523)
+.+.|+++++. ...|+++.|++...+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|
T Consensus 200 ~~~~i~~r~~~------~~~d~l~~ll~~~~~------~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~ 267 (412)
T 2zbx_A 200 LDGLITQFQTE------PGAGLVGALVADQLA------NGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQY 267 (412)
T ss_dssp HHHHHHHHHHS------CCSSHHHHHHHTTTT------TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHhC------CCCCHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
Confidence 99999887764 235899999986432 2245 8899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCC
Q 009899 345 EKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRV 424 (523)
Q Consensus 345 ~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~ 424 (523)
++|++|++ |++|||+|+||++|+++..++|.+++|++++||.||+|+.|.++.+++||||++
T Consensus 268 ~~l~~e~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~ 329 (412)
T 2zbx_A 268 AALRADRS------------------LVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTV 329 (412)
T ss_dssp HHHHHCGG------------------GHHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred HHHHhChH------------------hHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccc
Confidence 99999853 799999999999999996679999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCccc
Q 009899 425 WSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTN 503 (523)
Q Consensus 425 ~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~ 503 (523)
|+||++|+||||- ..++|||.|+|.|+|++||++|++++++.|+++| ++++..+.+ ++....+.+.
T Consensus 330 ~~dP~~F~PeR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~ 396 (412)
T 2zbx_A 330 YEDPDALDIHRSA------------RHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVE-QLVLRPGTTI 396 (412)
T ss_dssp SSSTTSCCTTSCC------------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GSCBCCTTSC
T ss_pred cCCccccCCCCCC------------CCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCcc-cceecccccc
Confidence 9999999999971 2479999999999999999999999999999999 799876422 2222334445
Q ss_pred ccCCCceEEee
Q 009899 504 IRATPLEILLK 514 (523)
Q Consensus 504 ~~~~~~~v~~~ 514 (523)
+....++|+..
T Consensus 397 ~g~~~lpv~~~ 407 (412)
T 2zbx_A 397 QGVNELPVTWH 407 (412)
T ss_dssp CCBSCCEEECC
T ss_pred CCcceeeeecc
Confidence 55566777654
No 34
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00 E-value=1e-60 Score=461.88 Aligned_cols=376 Identities=18% Similarity=0.254 Sum_probs=303.5
Q ss_pred CCchHHHHHHHHhhCCeEEEEe-cCeeEEEecCHHHHHHHHHhcccccCCCCC--c-cccccccC--CCcceeeCCCChh
Q 009899 57 QLPHLALGALADKYGPLFSIRI-GVHPALVVSSWEMAKELFTKHDVDISSRPK--L-TVGKLLGH--NYANFGFSPYNAY 130 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~-~~~~~v~v~dp~~~~~il~~~~~~~~~~~~--~-~~~~~~~~--~~~~~~~~~~g~~ 130 (523)
.+++..+.++ ++||||+++++ |+.+.++|+||+++++|+.++ .|++++. . ........ .+.+ ++..+|+.
T Consensus 19 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~ 94 (403)
T 3aba_A 19 FLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGS-LLWQDEPE 94 (403)
T ss_dssp TSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTC-CTTCCTTH
T ss_pred cChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccc-cccCCchh
Confidence 5678888999 89999999997 899999999999999999875 3555532 1 11100111 1223 45568999
Q ss_pred HHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhcccccCcc
Q 009899 131 WREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYFGAR 209 (523)
Q Consensus 131 w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~ 209 (523)
|+++|+++. +.|+.++++.+.+.+.+.++.+++.+.+. ++ ++|+...+ ..+++++++. +||.+.
T Consensus 95 h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------~~-~~d~~~~~~~~~~~~vi~~-~~G~~~---- 159 (403)
T 3aba_A 95 HTSDRKLLA-KEFTVRRMQALRPNIQRIVDEHLDAIEAR--------GG-PVDLVKTFANAVPSMVISD-LFGVPV---- 159 (403)
T ss_dssp HHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHHHHHH--------CS-CEEHHHHTTTHHHHHHHHH-HHTCCG----
T ss_pred HHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CccHHHHHHHHHHHHHHHH-HcCCCH----
Confidence 999999998 78999999999999999999999998742 44 78998766 5799999997 789876
Q ss_pred cccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHH
Q 009899 210 AENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFID 289 (523)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~ 289 (523)
.+. ..+......++... .+ .++..++.+.+.+++.+.|+++++. ...|+++
T Consensus 160 --~~~---~~~~~~~~~~~~~~--------~~----------p~~~~~~~~~~~~~~~~~i~~r~~~------~~~dll~ 210 (403)
T 3aba_A 160 --ERR---AEFQDIAEAMMRVD--------QD----------AAATEAAGMRLGGLLYQLVQERRAN------PGDDLIS 210 (403)
T ss_dssp --GGH---HHHHHHHHHHSBSS--------SC----------HHHHHHHHHHHHHHHHHHHHHHHHS------CCSSHHH
T ss_pred --HHH---HHHHHHHHHHHhcc--------Cc----------HHHHHHHHHHHHHHHHHHHHHHHhC------CCCCHHH
Confidence 222 24444444433210 00 1455667788889999999888764 2358999
Q ss_pred HHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcC
Q 009899 290 VLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEK 368 (523)
Q Consensus 290 ~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~ 368 (523)
.|++...+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 211 ~ll~~~~~------~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------- 268 (403)
T 3aba_A 211 ALITTEDP------DGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS---------------- 268 (403)
T ss_dssp HHHTSCCT------TCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG----------------
T ss_pred HHHhhccC------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH----------------
Confidence 99975321 2245 889999999999999999999999999999999999999999863
Q ss_pred ChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCC
Q 009899 369 LVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQ 448 (523)
Q Consensus 369 lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~ 448 (523)
|++|||+|+||++|+++..++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||.
T Consensus 269 --~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------- 335 (403)
T 3aba_A 269 --LVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP----------- 335 (403)
T ss_dssp --GHHHHHHHHHHHHCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC-----------
T ss_pred --HHHHHHHHHHhcCCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC-----------
Confidence 8999999999999999965699999999999999999999999999999999999999999999982
Q ss_pred cccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEeeccC
Q 009899 449 HFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLKPRL 517 (523)
Q Consensus 449 ~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 517 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++.. ++....+.+..+..+++|++++|+
T Consensus 336 -~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~-~~~~~~~~~~~~~~~lpv~~~~r~ 403 (403)
T 3aba_A 336 -APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVE-ELRFRHDMVFYGVHELPVTWHHHH 403 (403)
T ss_dssp -CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGG-GSCBCTTBSSCCBSCCEEECCCCC
T ss_pred -CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceecCCcc-ccccccCcccCCcceeEEEecCCC
Confidence 2479999999999999999999999999999999 589876421 222334556667899999999985
No 35
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00 E-value=1.2e-61 Score=472.74 Aligned_cols=405 Identities=17% Similarity=0.159 Sum_probs=309.5
Q ss_pred CCCCCCCCCCccccccccccC--C-CCchHHHHHHHHhhCCeEEEEe-cCeeEEEecCHHHHHHHHHhcccccCCCCC-c
Q 009899 35 KKPPEAAGKWPMIGHLHLLAG--P-QLPHLALGALADKYGPLFSIRI-GVHPALVVSSWEMAKELFTKHDVDISSRPK-L 109 (523)
Q Consensus 35 ~~~~pgp~~~p~~G~~~~~~~--~-~~~~~~~~~~~~kyG~v~~i~~-~~~~~v~v~dp~~~~~il~~~~~~~~~~~~-~ 109 (523)
.+.||| ++|++..... . .+++..+.++++ ||||++++. |+.++++|++|++++++++++ ..|++++. .
T Consensus 5 ~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~~ 77 (428)
T 1cpt_A 5 ATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGSE 77 (428)
T ss_dssp CCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSCS
T ss_pred cccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCccccc
Confidence 456777 8887654421 1 246778888876 799999998 678999999999999999765 45776665 3
Q ss_pred ccc-----c-c---ccC--CCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccc
Q 009899 110 TVG-----K-L---LGH--NYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESD 178 (523)
Q Consensus 110 ~~~-----~-~---~~~--~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 178 (523)
.+. . . .+. .....++..+|+.|+++|+++. +.|+.++++.+++.+.+.++.+++.+.+. +
T Consensus 78 ~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------~ 148 (428)
T 1cpt_A 78 ILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTL-NWFQPASIRKLEENIRRIAQASVQRLLDF--------D 148 (428)
T ss_dssp SCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHHH-TTSSHHHHGGGHHHHHHHHHHHHHHHHTS--------S
T ss_pred cCCcccccchhccccccccccccccccCChHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHHh--------C
Confidence 221 1 2 221 1112345567999999999997 89999999999999999999999988642 2
Q ss_pred cccchHHHH-HHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHH
Q 009899 179 QILLEMKKW-FGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKK 257 (523)
Q Consensus 179 ~~~vdl~~~-~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~ 257 (523)
+ ++|+... ...+++++|+.+ ||.+. .+. ..+......+...... ....+|++..+. ....++..+
T Consensus 149 ~-~~d~~~~~~~~~~~~vi~~~-fG~~~------~~~---~~~~~~~~~~~~~~~~--~~~~~P~l~~~~-~~~~~~~~~ 214 (428)
T 1cpt_A 149 G-ECDFMTDCALYYPLHVVMTA-LGVPE------DDE---PLMLKLTQDFFGVHEP--DEQAVAAPRQSA-DEAARRFHE 214 (428)
T ss_dssp S-EEEHHHHTTTTHHHHHHHHH-HTCCG------GGH---HHHHHHHHTTTCC-------------------CHHHHHHH
T ss_pred C-CeehHHHHHhhhHHHHHHHH-cCCCH------hHH---HHHHHHHHHHHhcccc--cccccccccccc-hhhHHHHHH
Confidence 4 7899855 467999999999 99876 222 2444444443322111 112344443321 122356667
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHH
Q 009899 258 TAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSL 336 (523)
Q Consensus 258 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~ 336 (523)
+.+.+.+++.+.|+++++. ...|+++.|++...+ +..+ ++++.+++..+++||+|||+.+++|++++
T Consensus 215 ~~~~~~~~~~~~i~~r~~~------~~~dll~~ll~~~~~------~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~ 282 (428)
T 1cpt_A 215 TIATFYDYFNGFTVDRRSC------PKDDVMSLLANSKLD------GNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIG 282 (428)
T ss_dssp HHHHHHHHHHHHHHHHTTS------CCSSHHHHHHHCBSS------SSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcC------CCCcHHHHHHhcccc------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888899999999887752 346899999976431 2245 88999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEccc
Q 009899 337 LLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLW 416 (523)
Q Consensus 337 L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~ 416 (523)
|++||++|++|++|++ |++|||+|+||++|+++. ++|.+++|++++||.||+|+.|.++.+
T Consensus 283 L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~ 343 (428)
T 1cpt_A 283 LSRNPEQLALAKSDPA------------------LIPRLVDEAVRWTAPVKS-FMRTALADTEVRGQNIKRGDRIMLSYP 343 (428)
T ss_dssp HHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHHCCBCC-CEEEESSCEEETTEEECTTCEEEECHH
T ss_pred HHhCHHHHHHHHHhHH------------------HHHHHHHHHHHhCCcccc-cceeeCCCeeECCEEECCCCEEEeCHH
Confidence 9999999999999975 899999999999999996 599999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcc-eecCCCccccc
Q 009899 417 KLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFD-ISTPGEAWVDM 495 (523)
Q Consensus 417 ~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~-~~~~~~~~~~~ 495 (523)
++||||++|+||++|+||||.. .++|||.|+|.|+|++||++|++++++.|+++|+ +++.++. .+
T Consensus 344 ~~~rdp~~~~dP~~F~PeR~~~------------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~ 409 (428)
T 1cpt_A 344 SANRDEEVFSNPDEFDITRFPN------------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGPP--RL 409 (428)
T ss_dssp HHTTCTTTCSSTTSCCTTCCSC------------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSCC--EE
T ss_pred HhCCChhhCCChhhcCCCCCCC------------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCCc--cc
Confidence 9999999999999999999941 2799999999999999999999999999999997 7876432 22
Q ss_pred CcCCCcccccCCCceEEeecc
Q 009899 496 TGTAGLTNIRATPLEILLKPR 516 (523)
Q Consensus 496 ~~~~~~~~~~~~~~~v~~~~r 516 (523)
. .+.+.....+++|+++||
T Consensus 410 ~--~~~~~~~~~~lpv~~~p~ 428 (428)
T 1cpt_A 410 V--ATNFVGGPKNVPIRFTKA 428 (428)
T ss_dssp C--CCSSBCSEEECEEEEEEC
T ss_pred c--cCccccCcceeeEEeeCC
Confidence 1 222334567899999886
No 36
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00 E-value=2e-61 Score=468.49 Aligned_cols=402 Identities=14% Similarity=0.124 Sum_probs=306.4
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccc
Q 009899 23 VFYYLQKWSNTGKKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVD 102 (523)
Q Consensus 23 ~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~ 102 (523)
+.+++++++.++++.+|||.. . .+++..+.++++ |||| +.++.+.++|+||+++++|+.++. .
T Consensus 6 ~~~~iyr~~~~pl~~~PGp~~----------~--~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~~-~ 68 (411)
T 2jjn_A 6 ETTCCARRTLTTIDEVPGMAD----------E--TALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDTA-T 68 (411)
T ss_dssp -----------CCCSCCCSSC----------H--HHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCTT-T
T ss_pred HhHHhhhcccCCCCCCCCccc----------c--cChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCcc-c
Confidence 344566777888999999982 1 456778888876 9998 567678999999999999998753 5
Q ss_pred cCCCCCccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccc
Q 009899 103 ISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILL 182 (523)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 182 (523)
|++++...+... .... ..++..+|+.|+++|+++. +.|+.++++.+.+.+.+.++.+++. . ++ ++
T Consensus 69 f~~~~~~~~~~~-~~~~-~~~~~~~g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~---~--------~~-~~ 133 (411)
T 2jjn_A 69 FSSDPTRVIEGA-SPTP-GMIHEIDPPEHRALRKVVS-SAFTPRTISDLEPRIRDVTRSLLAD---A--------GE-SF 133 (411)
T ss_dssp EESCGGGGSTTC-CCCT-TCGGGCCTTHHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHT---S--------CS-EE
T ss_pred ccCcccccCCcc-cccc-cccccCCchHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHhc---C--------CC-ce
Confidence 766654322111 1112 2345567999999999998 8999999999999999999988876 1 33 68
Q ss_pred hHHHH-HHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHH
Q 009899 183 EMKKW-FGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKE 261 (523)
Q Consensus 183 dl~~~-~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~ 261 (523)
|+... ...+++++++.+ ||.+. +.. + .+......+.... .|.+ + .....++..++.+.
T Consensus 134 d~~~~~~~~~~~~vi~~~-fG~~~-~~~-----~---~~~~~~~~~~~~~--------~~~~--~-~p~~~~~~~~~~~~ 192 (411)
T 2jjn_A 134 DLVDVLAFPLPVTIVAEL-LGLPP-MDH-----E---QFGDWSGALVDIQ--------MDDP--T-DPALAERIADVLNP 192 (411)
T ss_dssp EHHHHTTTHHHHHHHHHH-HTCCS-CCC-----S---TTCCHHHHHHHSC--------CSCT--T-CHHHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHHHH-cCCCH-HHH-----H---HHHHHHHHHHhcc--------Cccc--c-chHHHHHHHHHHHH
Confidence 99855 468999999998 99887 321 1 1222222222211 1110 0 01224556677888
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcC
Q 009899 262 LDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNN 340 (523)
Q Consensus 262 l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~ 340 (523)
+.+++.+.|+++++. ...|+++.|++...+ +..+ ++++.+++..+++||+|||+.+++|++++|++|
T Consensus 193 ~~~~~~~~i~~r~~~------~~~d~l~~ll~~~~~------~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~ 260 (411)
T 2jjn_A 193 LTAYLKARCAERRAD------PGDDLISRLVLAEVD------GRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEH 260 (411)
T ss_dssp HHHHHHHHHHHHHHS------CCSSHHHHHHHCCBT------TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhC------CCCCHHHHHHhcccC------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhC
Confidence 899999999888762 346899999976431 2245 889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEccccccc
Q 009899 341 RRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQT 420 (523)
Q Consensus 341 p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~ 420 (523)
|++|++|++|++ |++|||+|+||++|+++. ++|.+++|++++||.||+|+.|.++.+++||
T Consensus 261 P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~r 321 (411)
T 2jjn_A 261 PAHWDAAAEDPG------------------RIPAIVEEVLRYRPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANR 321 (411)
T ss_dssp THHHHHHHHCGG------------------GHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECSSCEEEEEHHHHHT
T ss_pred HHHHHHHHhCHH------------------hHHHHHHHHhhhCCCcCC-cceEECCCeEECCEEECCCCEEEechhhhCC
Confidence 999999999975 899999999999999996 6999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcc-eecCCCcccccCcCC
Q 009899 421 DPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFD-ISTPGEAWVDMTGTA 499 (523)
Q Consensus 421 d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~-~~~~~~~~~~~~~~~ 499 (523)
||++|+||++|+||||.. ...++|||.|+|.|+|++||++|++++++.|+++|+ +++.++. ++....
T Consensus 322 dp~~~~dP~~F~PeR~~~----------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~ 389 (411)
T 2jjn_A 322 DSDAHDDPDRFDPSRKSG----------GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDD--ERLRHF 389 (411)
T ss_dssp CTTTSSSTTSCCTTCCCS----------SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCSS--CCCCBC
T ss_pred ChhhcCCccccCCCCCCC----------CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCCC--ceeccc
Confidence 999999999999999842 124899999999999999999999999999999996 9987533 221123
Q ss_pred CcccccCCCceEEeeccCCCC
Q 009899 500 GLTNIRATPLEILLKPRLPSS 520 (523)
Q Consensus 500 ~~~~~~~~~~~v~~~~r~~~~ 520 (523)
+.+.....+++|+++||..-+
T Consensus 390 ~~~~~~~~~lpv~~~~~~r~~ 410 (411)
T 2jjn_A 390 EQIVLGTRHLPVLAGSSPRQS 410 (411)
T ss_dssp CSSSSSBSCCEEECSCCTTCC
T ss_pred cccccCcceeEEEecCCCCCC
Confidence 445556789999999886543
No 37
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00 E-value=2.1e-60 Score=460.34 Aligned_cols=376 Identities=17% Similarity=0.196 Sum_probs=303.5
Q ss_pred CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcccc-----ccccCCCcceeeCCCChhH
Q 009899 57 QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVG-----KLLGHNYANFGFSPYNAYW 131 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~w 131 (523)
.+++..+.++ ++|||||++++++.+.++|+||+++++|+.++. |++++..... ......+.+ ++..+|+.|
T Consensus 20 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~h 95 (411)
T 3a4g_A 20 QNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPM-MILMDPPDH 95 (411)
T ss_dssp TCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCC-GGGCCTTHH
T ss_pred cCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccc-cccCCchHH
Confidence 6788999999 899999999999999999999999999998763 6666532211 111112223 355689999
Q ss_pred HHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHH-HHHHHHHHHHHHHhcccccCccc
Q 009899 132 REMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKW-FGDLNLNVILMMIAGKRYFGARA 210 (523)
Q Consensus 132 ~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~-~~~~~~~~i~~~~fG~~~~~~~~ 210 (523)
+++|+++. +.|++++++.+.+.+.+.++.+++.+.. ++ ++|+... ...+++++++.+ ||.+.
T Consensus 96 ~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---------~~-~vd~~~~~~~~~~~~vi~~~-~G~~~----- 158 (411)
T 3a4g_A 96 TRLRKLVG-RSFTVRRMNELEPRITEIADGLLAGLPT---------DG-PVDLMREYAFQIPVQVICEL-LGVPA----- 158 (411)
T ss_dssp HHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHSCS---------SS-CEEHHHHTTTTHHHHHHHHH-HTCCG-----
T ss_pred HHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---------cC-CccHHHHHHHHhHHHHHHHH-hCCCH-----
Confidence 99999998 8999999999999999999999888743 23 6899754 568999999975 89876
Q ss_pred ccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHH
Q 009899 211 ENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDV 290 (523)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ 290 (523)
.+. ..+......++.. .| . ++..++.+.+.+++.+.|+++++. ...|+++.
T Consensus 159 -~~~---~~~~~~~~~~~~~---------~p------~----~~~~~~~~~~~~~~~~~i~~r~~~------~~~d~l~~ 209 (411)
T 3a4g_A 159 -EDR---DDFSAWSSVLVDD---------SP------A----DDKNAAMGKLHGYLSDLLERKRTE------PDDALLSS 209 (411)
T ss_dssp -GGH---HHHHHHHHHHTTS---------SC------T----TTHHHHHHHHHHHHHHHHHHHHHS------CCSSHHHH
T ss_pred -HHH---HHHHHHHHHHhcc---------CC------H----HHHHHHHHHHHHHHHHHHHHHHhC------CCCCHHHH
Confidence 222 2444444443321 12 0 234456777888899999888763 34589999
Q ss_pred HHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCC
Q 009899 291 LLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKL 369 (523)
Q Consensus 291 ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l 369 (523)
|++...++ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 210 ll~~~~~~-----~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~----------------- 267 (411)
T 3a4g_A 210 LLAVSDED-----GDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS----------------- 267 (411)
T ss_dssp HHHCCCTT-----CCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-----------------
T ss_pred HHHhhccC-----CCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH-----------------
Confidence 99764312 2245 889999999999999999999999999999999999999999863
Q ss_pred hhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCc
Q 009899 370 VYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQH 449 (523)
Q Consensus 370 p~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~ 449 (523)
|++|||+|+||++|+++..++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||.
T Consensus 268 -~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------ 334 (411)
T 3a4g_A 268 -LISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA------------ 334 (411)
T ss_dssp -GHHHHHHHHHHHTCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC------------
T ss_pred -HHHHHHHHHHHhcccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC------------
Confidence 8999999999999999966699999999999999999999999999999999999999999999983
Q ss_pred ccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCc-ccccCcCCCcccccCCCceEEeeccCCC
Q 009899 450 FELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEA-WVDMTGTAGLTNIRATPLEILLKPRLPS 519 (523)
Q Consensus 450 ~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~r~~~ 519 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++. ++.+ ..+.+..+..+++|++++|+..
T Consensus 335 ~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~--~~~~~~~~~~~lpv~~~~r~~~ 404 (411)
T 3a4g_A 335 SGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVY--RESTLVRGLSRMPVTMGPRSAL 404 (411)
T ss_dssp TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCB--CCCTTBCCBSCCEEECCCCCC-
T ss_pred CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCcEECCCcccccc--ccCccccCcceeEEEecCcchh
Confidence 2479999999999999999999999999999999 69987642 2333 3345566788999999999754
No 38
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00 E-value=3.4e-61 Score=466.40 Aligned_cols=374 Identities=14% Similarity=0.184 Sum_probs=298.0
Q ss_pred CCchHHHHHHHHhhCCeEEEEe-cCeeEEEecCHHHHHHHHHhcccccCCCCCccccc----cccC---CCcceeeCCCC
Q 009899 57 QLPHLALGALADKYGPLFSIRI-GVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGK----LLGH---NYANFGFSPYN 128 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~-~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~g 128 (523)
.+++..+.++ ++||||+++++ |+.++++|+||+++++|+.++. +++++...... .... ...+ ++..+|
T Consensus 24 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g 99 (408)
T 3abb_A 24 YQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFP-LIGVDD 99 (408)
T ss_dssp TSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCT-TTTCCT
T ss_pred cCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccccc-cccCCc
Confidence 6778999999 89999999998 8889999999999999998653 33333211110 1110 1112 455689
Q ss_pred hhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHH-HHHHHHHHHHHhcccccC
Q 009899 129 AYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFG-DLNLNVILMMIAGKRYFG 207 (523)
Q Consensus 129 ~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~ 207 (523)
+.|+++|+++. +.|+.++++.+++.+.+.++.+++.+... |+ ++|+...+. .+++++++. +||.+.
T Consensus 100 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------g~-~~d~~~~~~~~~~~~vi~~-~~G~~~-- 166 (408)
T 3abb_A 100 PVHARQRRMLI-PSFGVKRMNAIRPRLQSLVDRLLDDMLAK--------GP-GADLVSAFALPVPSVAICE-LLGVPY-- 166 (408)
T ss_dssp THHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHT--------CS-CEEHHHHTTTHHHHHHHHH-HHTCCG--
T ss_pred hHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CeehHHHHHHHHHHHHHHH-HhCCCH--
Confidence 99999999998 79999999999999999999999998752 44 799998876 589999997 789876
Q ss_pred cccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccH
Q 009899 208 ARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDF 287 (523)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~ 287 (523)
.+. ..+...+..++... .+ ++..++.+.+.+++.+.|+++++. ...|+
T Consensus 167 ----~~~---~~~~~~~~~~~~~~--------~~-----------~~~~~~~~~~~~~~~~~i~~r~~~------~~~d~ 214 (408)
T 3abb_A 167 ----GDH---DFFEECSRNFVGAA--------TS-----------AEADAAFGELYTYLHGLVGRKQAE------PEDGL 214 (408)
T ss_dssp ----GGH---HHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHHS------CCSSH
T ss_pred ----HHH---HHHHHHHHHHhccc--------ch-----------HHHHHHHHHHHHHHHHHHHHHHhC------CCCCH
Confidence 222 24444444432210 01 122245667778888888887753 23589
Q ss_pred HHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhh
Q 009899 288 IDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDI 366 (523)
Q Consensus 288 ~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 366 (523)
++.|++...+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 215 l~~ll~~~~~------~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-------------- 274 (408)
T 3abb_A 215 LDELIARQLE------EGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG-------------- 274 (408)
T ss_dssp HHHHHHHHHT------SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH--------------
T ss_pred HHHHHhcccC------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------------
Confidence 9999987542 2245 889999999999999999999999999999999999999998764
Q ss_pred cCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCC
Q 009899 367 EKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVK 446 (523)
Q Consensus 367 ~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~ 446 (523)
|++|||+|+||++|+++ .++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||-
T Consensus 275 ----~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~--------- 340 (408)
T 3abb_A 275 ----AVSGVVEELLRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNA--------- 340 (408)
T ss_dssp ----HHHHHHHHHHHHHCSSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCC---------
T ss_pred ----hHHHHHHHHHHhcCccc-ccceEeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCCC---------
Confidence 79999999999999999 5699999999999999999999999999999999999999999999971
Q ss_pred CCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEeeccC
Q 009899 447 GQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLKPRL 517 (523)
Q Consensus 447 ~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 517 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++..+.+ +.....+.+..+...++|++++|+
T Consensus 341 ---~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~lpv~~~~~~ 408 (408)
T 3abb_A 341 ---RHHVGFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVPLD-EVPIKAGHDAQGPIELPVVWHHHH 408 (408)
T ss_dssp ---TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GSCBCCTTSCCSBSCCEEECSCCC
T ss_pred ---CCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCccceecCCcc-ccccccCcccCCcceeEEEeCCCC
Confidence 2479999999999999999999999999999999 899875422 222233455667899999999885
No 39
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00 E-value=1.9e-60 Score=461.45 Aligned_cols=380 Identities=16% Similarity=0.171 Sum_probs=298.6
Q ss_pred CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccc----cccCCCcceeeCCCChhHH
Q 009899 57 QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGK----LLGHNYANFGFSPYNAYWR 132 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~w~ 132 (523)
.+++..+.++ ++||||++++.++.++++|+||+++++++.++ ..|++++...... .....+.+ ++..+|+.|+
T Consensus 13 ~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~h~ 89 (404)
T 3ejb_B 13 KNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQM-MLFQNQPDHR 89 (404)
T ss_dssp HCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTS-GGGCCTTHHH
T ss_pred cCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcc-hhhcCCchHH
Confidence 5678888888 58999999999999999999999999999877 4566665422110 00111112 4566899999
Q ss_pred HHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHH-HHHHHHHHHHHHHhcccccCcccc
Q 009899 133 EMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKW-FGDLNLNVILMMIAGKRYFGARAE 211 (523)
Q Consensus 133 ~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~-~~~~~~~~i~~~~fG~~~~~~~~~ 211 (523)
++|+++. +.|++++++.+++.+.+.++.+++.+.+ +. .+|+... ...++.++++.+ ||.+.
T Consensus 90 ~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---------~~-~~d~~~~~~~~~~~~vi~~~-~G~~~------ 151 (404)
T 3ejb_B 90 RLRTLAS-GAFTPRTTESYQPYIIETVHHLLDQVQG---------KK-KMEVISDFAFPLASFVIANI-IGVPE------ 151 (404)
T ss_dssp HHHHHHH-GGGSHHHHHTTHHHHHHHHHHHHHTTTT---------TS-EEEHHHHTHHHHHHHHHHHH-HTCCG------
T ss_pred HHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhhh---------cC-CcchHHHHHHHHHHHHHHHH-cCCCH------
Confidence 9999998 8999999999999999999999888753 33 6887655 456899999884 88776
Q ss_pred cchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 009899 212 NDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVL 291 (523)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~l 291 (523)
++.+ .+......+..... .|+. ....++..++.+.+.+++.+.++++++. ...|+++.|
T Consensus 152 ~~~~---~~~~~~~~~~~~~~-------~p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~d~l~~l 210 (404)
T 3ejb_B 152 EDRE---QLKEWAASLIQTID-------FTRS-----RKALTEGNIMAVQAMAYFKELIQKRKRH------PQQDMISML 210 (404)
T ss_dssp GGHH---HHHHHHHHHHGGGS-------TTCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHS------CCSSHHHHH
T ss_pred HHHH---HHHHHHHHHHHhcc-------CCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhC------CcchHHHHH
Confidence 3332 44444444332211 1211 1124566677888899999999888753 456899999
Q ss_pred HHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCCh
Q 009899 292 LSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLV 370 (523)
Q Consensus 292 l~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp 370 (523)
+ ...+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 211 l-~~~~------~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------ 265 (404)
T 3ejb_B 211 L-KGRE------KDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD------------------ 265 (404)
T ss_dssp H-HC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------
T ss_pred H-hccc------CCCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------
Confidence 9 3222 2245 889999999999999999999999999999999999999999975
Q ss_pred hHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCcc
Q 009899 371 YLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHF 450 (523)
Q Consensus 371 ~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~ 450 (523)
|++|||+|+||++|+++ ..+|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||- .
T Consensus 266 ~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~------------~ 332 (404)
T 3ejb_B 266 LIGTAVEECLRYESPTQ-MTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP------------N 332 (404)
T ss_dssp GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS------------C
T ss_pred HHHHHHHHHHHhCCccc-ccceEeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCC------------C
Confidence 79999999999999999 5699999999999999999999999999999999999999999999982 2
Q ss_pred cccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEeeccCCC
Q 009899 451 ELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLKPRLPS 519 (523)
Q Consensus 451 ~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~ 519 (523)
.++|||.|+|.|+|++||++|++++++.|+++| ++++.+++ +.+ ..+.+......++|+++||.+.
T Consensus 333 ~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-~~~--~~~~~~~~~~~lpv~~~~~~~~ 399 (404)
T 3ejb_B 333 PHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFE-WRY--RPLFGFRALEELPVTFEASWSH 399 (404)
T ss_dssp CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEEC--C-CCB--CSCSSBCCBSCCEEECC-----
T ss_pred CCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCcccccCCCC-cee--ccCcccCCcceeEEEEeccccC
Confidence 369999999999999999999999999999999 99997532 333 3445566778999999998654
No 40
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00 E-value=7.4e-61 Score=463.69 Aligned_cols=397 Identities=15% Similarity=0.152 Sum_probs=311.4
Q ss_pred hcCCCCCCCCCCCCCccc--cccccccC---CCCchHHHHHHHHhhC--CeEEEE-ecCeeEEEecCHHHHHHHHHhccc
Q 009899 30 WSNTGKKPPEAAGKWPMI--GHLHLLAG---PQLPHLALGALADKYG--PLFSIR-IGVHPALVVSSWEMAKELFTKHDV 101 (523)
Q Consensus 30 ~~~~~~~~~pgp~~~p~~--G~~~~~~~---~~~~~~~~~~~~~kyG--~v~~i~-~~~~~~v~v~dp~~~~~il~~~~~ 101 (523)
+...+.+.||||.+.|.. +.+-.+.. ..+++..+.+++ +|| |||+++ +| +.++|+||+++++|+.+. .
T Consensus 5 ~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g--~~vvv~~~~~v~~vl~~~-~ 80 (415)
T 2zwu_A 5 TIQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG--GHWIATRGQLIREAYEDY-R 80 (415)
T ss_dssp ------CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG--CEEEECSHHHHHHHHHCT-T
T ss_pred cccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC--CeEEEcCHHHHHHHHcCc-c
Confidence 345567789999998874 43321111 156788898995 799 999998 54 689999999999999754 4
Q ss_pred ccCCCC-CccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccc
Q 009899 102 DISSRP-KLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQI 180 (523)
Q Consensus 102 ~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 180 (523)
.|++++ ...... ... +.+.++..+|+.|+++|+++. +.|+.++++.+.+.+.+.++.+++.+... +
T Consensus 81 ~f~~~~~~~~~~~-~~~-~~~~l~~~~g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--------~-- 147 (415)
T 2zwu_A 81 HFSSECPFIPREA-GEA-YDFIPTSMDPPEQRQFRALAN-QVVGMPVVDKLENRIQELACSLIESLRPQ--------G-- 147 (415)
T ss_dssp TEETTSCSSSHHH-HHH-CCCTTTTCCTTTTHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHGGG--------T--
T ss_pred ccCCCcccCCCCc-ccc-ccccCccCCCcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------C--
Confidence 576665 222111 111 112034557999999999998 88999999999999999999999988542 3
Q ss_pred cchHHHHH-HHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHH
Q 009899 181 LLEMKKWF-GDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTA 259 (523)
Q Consensus 181 ~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~ 259 (523)
++|+...+ ..+++++++.+ ||.++ .+. ..+...+..++.. ..|. +..++.
T Consensus 148 ~~d~~~~~~~~~~~~vi~~~-~G~~~------~~~---~~~~~~~~~~~~~--------~~P~-----------~~~~~~ 198 (415)
T 2zwu_A 148 QCNFTEDYAEPFPIRIFMLL-AGLPE------EDI---PHLKYLTDQMTRP--------DGSM-----------TFAEAK 198 (415)
T ss_dssp EEEHHHHTTTHHHHHHHHHH-HTCCG------GGH---HHHHHHHHHHHSC--------CSSS-----------CHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHH-cCCCH------HHH---HHHHHHHHHHHhc--------cCHH-----------HHHHHH
Confidence 68999865 78999999999 99887 222 2455555544331 0121 344567
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHh
Q 009899 260 KELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLL 338 (523)
Q Consensus 260 ~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~ 338 (523)
+.+.+++.+.|+++++. ...|+++.|++...+ +..+ ++++.+++..+++||+|||+.+++|++++|+
T Consensus 199 ~~~~~~~~~~i~~r~~~------~~~dll~~ll~~~~~------~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~ 266 (415)
T 2zwu_A 199 EALYDYLIPIIEQRRQK------PGTDAISIVANGQVN------GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLA 266 (415)
T ss_dssp HHHHHHHHHHHHHHHHS------CCSSHHHHHHTCEET------TEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC------CCCCHHHHHHHhhhc------CCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Confidence 77888899999888763 346899999975321 2245 8899999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEccccc
Q 009899 339 NNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKL 418 (523)
Q Consensus 339 ~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~ 418 (523)
+||++|++|++|++ |++|||+|+||++|+++ .+ |.+++|++++||.||+|+.|.++.+++
T Consensus 267 ~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~-~~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~ 326 (415)
T 2zwu_A 267 KSPEHRQELIERPE------------------RIPAACEELLRRFSLVA-DG-RILTSDYEFHGVQLKKGDQILLPQMLS 326 (415)
T ss_dssp HCHHHHHHHHHCGG------------------GHHHHHHHHHHHTCCBC-CE-EEESSCEEETTEEECTTCEEECCHHHH
T ss_pred hCHHHHHHHHhCHH------------------HHHHHHHHHHhhcCCcC-Cc-eeeCCCEEECCEEECCCCEEEeCchhh
Confidence 99999999999964 89999999999999999 57 999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcc-eecCCCcccccCc
Q 009899 419 QTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFD-ISTPGEAWVDMTG 497 (523)
Q Consensus 419 ~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~-~~~~~~~~~~~~~ 497 (523)
||||++|+||++|+||||- ..++|||.|+|.|+|++||++|++++++.|+++|+ +++.++. .+.
T Consensus 327 ~rdp~~~~dP~~F~PeR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~- 391 (415)
T 2zwu_A 327 GLDERENACPMHVDFSRQK------------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGA--QIQ- 391 (415)
T ss_dssp HHCTTTSSSTTSCCTTCSS------------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTTC--CCC-
T ss_pred CCCchhCCCccccCCCCCC------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCCc--ccc-
Confidence 9999999999999999961 24799999999999999999999999999999998 9987643 231
Q ss_pred CCCcccccCCCceEEeeccCCC
Q 009899 498 TAGLTNIRATPLEILLKPRLPS 519 (523)
Q Consensus 498 ~~~~~~~~~~~~~v~~~~r~~~ 519 (523)
..+.+..+..+++|+++||+..
T Consensus 392 ~~~~~~~~~~~lpv~~~~r~~~ 413 (415)
T 2zwu_A 392 HKSGIVSGVQALPLVWDPATTK 413 (415)
T ss_dssp EECSSBCEESCCEEECCGGGCC
T ss_pred cCCccccCcceeEEEEecCCCC
Confidence 2344556678999999999764
No 41
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00 E-value=5.2e-61 Score=463.84 Aligned_cols=374 Identities=15% Similarity=0.165 Sum_probs=303.9
Q ss_pred CCchHHHHHHHHhh--CCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccccccCCCcceeeCCCChhHHHH
Q 009899 57 QLPHLALGALADKY--GPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREM 134 (523)
Q Consensus 57 ~~~~~~~~~~~~ky--G~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 134 (523)
.+++..+.+++++| |||++++.++ +.++|+||+++++|+++ ...|++++.......... +...++..+|+.|+++
T Consensus 19 ~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~ 95 (398)
T 4fb2_A 19 GTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQN-TKAFSNKGVTFPRYETGE-FELMMAGQDDPVHKKY 95 (398)
T ss_dssp SSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTC-CSSEEGGGCSSSCC-----CCCTTTTCCTTHHHHH
T ss_pred cChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhC-hhhccCCcccccCCCCcc-cccCcccCCchHHHHH
Confidence 67899999999999 9999999876 58999999999999954 345666654332111111 1123466789999999
Q ss_pred HHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhcccccCcccccc
Q 009899 135 RKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYFGARAEND 213 (523)
Q Consensus 135 R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~ 213 (523)
|+++. +.|+.++++.+.+.+.+.++.+++.+... + .+|+...+ ..+++++++. +||.+. ++
T Consensus 96 R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--------~--~~d~~~~~~~~~~~~vi~~-~~G~~~------~~ 157 (398)
T 4fb2_A 96 RQLVA-KPFSPEATDLFTEQLRQSTNDLIDARIEL--------G--EGDAATWLANEIPARLTAI-LLGLPP------ED 157 (398)
T ss_dssp HHHHH-TTTCHHHHHTTHHHHHHHHHHHHHTTTTT--------T--EEEHCCCCCTTHHHHHHHH-HTTSCG------GG
T ss_pred HHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhhc--------C--CccHHHHHHHHHHHHHHHH-HcCCCH------HH
Confidence 99998 89999999999999999999998877442 3 57765444 6899999998 688765 22
Q ss_pred hHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHH
Q 009899 214 ETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLS 293 (523)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~ 293 (523)
. ..+...+..++. + ....+..++.+.+.+++.+.++++++. ...|+++.|++
T Consensus 158 ~---~~~~~~~~~~~~-----------~--------~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~d~l~~ll~ 209 (398)
T 4fb2_A 158 G---DTYRRWVWAITH-----------V--------ENPEEGAEIFAELVAHARTLIAERRTN------PGNDIMSRVIM 209 (398)
T ss_dssp H---HHHHHHHHHHHH-----------C--------CCHHHHHHHHHHHHHHHHHHHHHHHHS------CCSSHHHHHHH
T ss_pred H---HHHHHHHHHHhc-----------C--------CCHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCHHHHHHH
Confidence 2 345555555433 1 012356677888899999999988763 44699999998
Q ss_pred HhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhH
Q 009899 294 VLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYL 372 (523)
Q Consensus 294 ~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l 372 (523)
...+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++ |+
T Consensus 210 ~~~~------~~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l 265 (398)
T 4fb2_A 210 SKID------GESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE------------------LI 265 (398)
T ss_dssp CCBT------TBCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GH
T ss_pred cccC------CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HH
Confidence 6442 2235 889999999999999999999999999999999999999999976 78
Q ss_pred HHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccc
Q 009899 373 QAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFEL 452 (523)
Q Consensus 373 ~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~ 452 (523)
+|||+|+||++|+++ ++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||. ..+
T Consensus 266 ~a~i~E~lRl~p~~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------------~~~ 331 (398)
T 4fb2_A 266 PNAVDELLRFYGPAM--VGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTP------------NRH 331 (398)
T ss_dssp HHHHHHHHHHHCCBC--EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCS------------CCC
T ss_pred HHHHHHHHHhCCCcC--CCeeeCCCEEECCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCCC------------CCC
Confidence 999999999999999 599999999999999999999999999999999999999999999982 247
Q ss_pred cccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEeeccCCCC
Q 009899 453 LPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLKPRLPSS 520 (523)
Q Consensus 453 ~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~~ 520 (523)
+|||.|+|.|+|++||.+|++++++.|+++| +++++++.++.+. .+.+ .....++|+++||.+.|
T Consensus 332 ~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~--~~~~-~~~~~lpv~~~~~~~~s 397 (398)
T 4fb2_A 332 LSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNKECEWL--MGQV-AGMLHVPIIFPKGKRLS 397 (398)
T ss_dssp CTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCEECTTSCCEEE--CSSB-CEEEECEEECCCCCCCC
T ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEECCCCCceec--cccc-cccceeEEEEcCCCCCC
Confidence 9999999999999999999999999999999 9999876543332 2333 34567999999998776
No 42
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=9.1e-61 Score=463.20 Aligned_cols=378 Identities=21% Similarity=0.246 Sum_probs=302.1
Q ss_pred CCchHHHHHHHHhhCCeEEEEe-cCeeEEEecCHHHHHHHHHhcccccCCCC-Ccccc---c------ccc-CC-Cccee
Q 009899 57 QLPHLALGALADKYGPLFSIRI-GVHPALVVSSWEMAKELFTKHDVDISSRP-KLTVG---K------LLG-HN-YANFG 123 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~-~~~~~v~v~dp~~~~~il~~~~~~~~~~~-~~~~~---~------~~~-~~-~~~~~ 123 (523)
.+++..+.++ ++||||+++++ ++.+.++|+||+++++|+.++. +++++ ..... . +.+ .. ..+ +
T Consensus 17 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l 92 (411)
T 1gwi_A 17 TDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRS-M 92 (411)
T ss_dssp SCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSS-G
T ss_pred CChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhccccc-c
Confidence 6678899999 99999999998 8999999999999999998753 33332 11100 0 000 01 122 4
Q ss_pred eCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHH-HHHHHHHHHHHhc
Q 009899 124 FSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFG-DLNLNVILMMIAG 202 (523)
Q Consensus 124 ~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG 202 (523)
+..+|+.|+++|+++. +.|+.++++.+.+.+.+.++++++.+.+ . ++ ++|+...+. .+++++++. +||
T Consensus 93 ~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~------~--~~-~~d~~~~~~~~~~~~vi~~-~~G 161 (411)
T 1gwi_A 93 LTVDGAEHRRLRTLVA-QALTVRRVEHMRGRITELTDRLLDELPA------D--GG-VVDLKAAFAYPLPMYVVAD-LMG 161 (411)
T ss_dssp GGCCHHHHHHHHHHHT-TTSCHHHHHTTHHHHHHHHHHHHHTSCC------S--CC-CEEHHHHTTTHHHHHHHHH-HHT
T ss_pred ccCCcHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHH------c--CC-CcchHHHHhhHHHHHHHHH-HhC
Confidence 5668999999999998 8999999999999999999999887742 1 44 799998886 599999996 689
Q ss_pred ccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 009899 203 KRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGAN 282 (523)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~ 282 (523)
.+. .+. ..+...+..++... ...++..++.+.+.+++.+.|+++++.
T Consensus 162 ~~~------~~~---~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~i~~r~~~------ 208 (411)
T 1gwi_A 162 IEE------ARL---PRLKVLFEKFFSTQ------------------TPPEEVVATLTELASIMTDTVAAKRAA------ 208 (411)
T ss_dssp CCG------GGH---HHHHHHHHHHHCTT------------------SCHHHHHHHHHHHHHHHHHHHHHHHHS------
T ss_pred CCH------HHH---HHHHHHHHHHhccC------------------CChHHHHHHHHHHHHHHHHHHHHHHhC------
Confidence 876 222 24555554443210 012455667788889999999887753
Q ss_pred CCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCC
Q 009899 283 LDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLL 361 (523)
Q Consensus 283 ~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~ 361 (523)
...|+++.|++...+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|+
T Consensus 209 ~~~d~l~~ll~~~~~------~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~---------- 272 (411)
T 1gwi_A 209 PGDDLTSALIQASEN------GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE---------- 272 (411)
T ss_dssp CCSSHHHHHHHCCBT------TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS----------
T ss_pred CCCCHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh----------
Confidence 346899999976432 2245 88999999999999999999999999999999999999999874
Q ss_pred ChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCC-CCCCCCCCccccCCC
Q 009899 362 CESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVW-SDPLEFKPERFLTAH 440 (523)
Q Consensus 362 ~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~ 440 (523)
+|++|||+|+||++|+++..++|.+++|++++||.||+|+.|.++.+++||||++| +||++|+||||.+
T Consensus 273 --------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~-- 342 (411)
T 1gwi_A 273 --------AEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG-- 342 (411)
T ss_dssp --------SCHHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS--
T ss_pred --------HHHHHHHHHHHHhCCcccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC--
Confidence 27999999999999999976799999999999999999999999999999999999 9999999999942
Q ss_pred CCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEeeccCC
Q 009899 441 KDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLKPRLP 518 (523)
Q Consensus 441 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~ 518 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++..+.. ++....+.+..+..+++|+++||++
T Consensus 343 ---------~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~lpv~~~~r~~ 411 (411)
T 1gwi_A 343 ---------NRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAA-ELRNKPVVTQNDLFELPVRLAHHHH 411 (411)
T ss_dssp ---------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GCCBCSCTTBCCBSCCEEESSCC--
T ss_pred ---------CCcccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCcc-cccccccccccCcceeEEEecCCCC
Confidence 3489999999999999999999999999999999 799875422 2233344556678999999999964
No 43
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=4.9e-60 Score=458.33 Aligned_cols=379 Identities=21% Similarity=0.273 Sum_probs=300.9
Q ss_pred CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCC--cccc-c------cccC-CCcceeeCC
Q 009899 57 QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPK--LTVG-K------LLGH-NYANFGFSP 126 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~--~~~~-~------~~~~-~~~~~~~~~ 126 (523)
.+++..+.++ ++||||+++++++.+.++|+||+++++|+.++. +++++. +... . ..+. ...+ ++..
T Consensus 15 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~ 90 (408)
T 1odo_A 15 ADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVEN-MFTA 90 (408)
T ss_dssp TTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCS-GGGC
T ss_pred CChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccc-cccc
Confidence 6788899999 999999999998899999999999999998653 333321 1100 0 0000 1112 4566
Q ss_pred CChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHH-HHHHHHHHHHHhcccc
Q 009899 127 YNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFG-DLNLNVILMMIAGKRY 205 (523)
Q Consensus 127 ~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~ 205 (523)
+|+.|+++|+++. +.|+.++++.+.+.+.+.++++++.+.+. .+ ++ ++|+...+. .+++++++. +||.+.
T Consensus 91 ~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----~~--~~-~~d~~~~~~~~~~~~vi~~-~~G~~~ 161 (408)
T 1odo_A 91 YGPNHRKLRRLVA-PAFSARRVDAMRPAVEAMVTGLVDRLAEL----PA--GE-PVDLRQELAYPLPIAVIGH-LMGVPQ 161 (408)
T ss_dssp CHHHHHHHHHTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHS----CT--TS-CEEHHHHTTTHHHHHHHHH-HHTCCH
T ss_pred CChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhh----cC--CC-CcchHHHHhhhhHHHHHHH-HhCCCH
Confidence 8999999999998 89999999999999999999999999752 11 44 799998886 599999996 788866
Q ss_pred cCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 009899 206 FGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDL 285 (523)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~ 285 (523)
.+. ..+...+..++... . ..++..++.+.+.+++.+.|+++++. ...
T Consensus 162 ------~~~---~~~~~~~~~~~~~~--------------~----~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~ 208 (408)
T 1odo_A 162 ------DRR---DGFRALVDGVFDTT--------------L----DQAEAQANTARLYEVLDQLIAAKRAT------PGD 208 (408)
T ss_dssp ------HHH---HHHHHHHHHHHCTT--------------C----CHHHHHHHHHHHHHHHHHHHHHHHHS------CCS
T ss_pred ------HHH---HHHHHHHHHHhccc--------------C----CHHHHHHHHHHHHHHHHHHHHHHhhC------CCC
Confidence 222 24555544443210 0 12455667788889999999887753 335
Q ss_pred cHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChh
Q 009899 286 DFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCES 364 (523)
Q Consensus 286 d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 364 (523)
|+++.|++...++ ..+..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|+
T Consensus 209 d~l~~ll~~~~~~---~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------- 272 (408)
T 1odo_A 209 DMTSLLIAARDDE---GDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE------------- 272 (408)
T ss_dssp SHHHHHHHHHCC--------CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS-------------
T ss_pred CHHHHHHHhcccc---cccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-------------
Confidence 8999999875431 012245 88999999999999999999999999999999999999999974
Q ss_pred hhcCChhHHHHHHHHhcCCCCCccccceeeccccccc-ceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCC
Q 009899 365 DIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVA-EYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDV 443 (523)
Q Consensus 365 ~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~ 443 (523)
+|++|||+|+||++|++|..++|.+++|++++ ||.||+|+.|.++.+++||||++|+||++|+||||
T Consensus 273 -----~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~------- 340 (408)
T 1odo_A 273 -----VTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT------- 340 (408)
T ss_dssp -----SCHHHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS-------
T ss_pred -----HHHHHHHHHHHhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC-------
Confidence 27999999999999999976799999999999 99999999999999999999999999999999994
Q ss_pred CCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEeec
Q 009899 444 DVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLKP 515 (523)
Q Consensus 444 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 515 (523)
+..++|||.|+|.|+|++||++|++++++.|+++| ++++..+.. ++....+.+.++..+++|+++|
T Consensus 341 -----~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~l~v~~~~ 407 (408)
T 1odo_A 341 -----VKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAE-ELPPVPSLISNGHQRLPVLLHA 407 (408)
T ss_dssp -----CCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTS-CCCBCSCSSBCCBSCCEEECC-
T ss_pred -----CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCCcc-ccccccCccccCcccceEEecC
Confidence 12589999999999999999999999999999999 799865321 2333345566778999999875
No 44
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00 E-value=5.8e-60 Score=457.14 Aligned_cols=386 Identities=16% Similarity=0.180 Sum_probs=302.5
Q ss_pred CCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEe-cCee-EEEecCHHHHHHHHHhcccccCCCCCccccc
Q 009899 36 KPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRI-GVHP-ALVVSSWEMAKELFTKHDVDISSRPKLTVGK 113 (523)
Q Consensus 36 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~-~~~~-~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~ 113 (523)
+.+|+|+++|+.++ .. .+++.++.+++ +|||||++++ ++.+ .++|+||+++++|+.++ .|++++......
T Consensus 8 ~~~~~~~~~p~~~~---~~--~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~ 79 (406)
T 1s1f_A 8 QAVPPVRDWPAVDL---PG--SDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVMDRQV 79 (406)
T ss_dssp CCSCCEEECCCCCC---CT--TCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTTTTTB
T ss_pred hhccCCCCCCCCcc---cc--cCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCCCCCc
Confidence 46777777888777 22 67788888885 7999999996 5666 99999999999999863 466554432111
Q ss_pred --c---ccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH
Q 009899 114 --L---LGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF 188 (523)
Q Consensus 114 --~---~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~ 188 (523)
. ....+.+ ++..+|+.|+++|+++. +.|+.++++.+.+.+.+.++.+++.+.+. ++ ++|+...+
T Consensus 80 ~~~~~~~~~~~~~-l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------~~-~~d~~~~~ 148 (406)
T 1s1f_A 80 TRLAPHFIPARGA-VGFLDPPDHTRLRRSVA-AAFTARGVERVRERSRGMLDELVDAMLRA--------GP-PADLTEAV 148 (406)
T ss_dssp CBSSSSCSSCTTS-GGGCCTTHHHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHHHH--------CS-SEEHHHHT
T ss_pred ccccccccccccc-cccCCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CccHHHHH
Confidence 0 1111223 34567999999999998 78999999999999999999999998742 33 78998766
Q ss_pred -HHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHH
Q 009899 189 -GDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIE 267 (523)
Q Consensus 189 -~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~ 267 (523)
..+++++++. +||.+. ++.+ .+......++... .| . ++..++.+.+.+++.
T Consensus 149 ~~~~~~~vi~~-~~G~~~------~~~~---~~~~~~~~~~~~~--------~~------~----~~~~~~~~~~~~~~~ 200 (406)
T 1s1f_A 149 LSPFPIAVICE-LMGVPA------TDRH---SMHTWTQLILSSS--------HG------A----EVSERAKNEMNAYFS 200 (406)
T ss_dssp TTHHHHHHHHH-HHTCCG------GGHH---HHHHHHHHHHHHH--------TT------C----CCCHHHHTHHHHHHH
T ss_pred hhHhHHHHHHH-HhCCCH------HHHH---HHHHHHHHHHhcc--------CC------H----HHHHHHHHHHHHHHH
Confidence 5799999998 599876 2222 3444444433211 01 0 122345666777888
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHH
Q 009899 268 EWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEK 346 (523)
Q Consensus 268 ~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~ 346 (523)
+.|+++++. ...|+++.|++...+ ..+ ++++.+++..+++|| |||+.+++|++++|++||++|++
T Consensus 201 ~~i~~r~~~------~~~d~l~~ll~~~~~-------~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~ 266 (406)
T 1s1f_A 201 DLIGLRSDS------AGEDVTSLLGAAVGR-------DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAER 266 (406)
T ss_dssp HHHHTSCCS------CCCSHHHHHHHHHHT-------TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHH
T ss_pred HHHHHHHhC------CCCCHHHHHHHhhcc-------cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHH
Confidence 888765542 345999999986432 134 889999999999999 99999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCc-cccceeecccccccceeeCCCCEEEEcccccccCCCCC
Q 009899 347 VKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGP-LAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVW 425 (523)
Q Consensus 347 l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~-~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~ 425 (523)
|++|++ |++|||+|+||++|+++ ..++|.+++|++++||.||+|+.|.++.+++||||++|
T Consensus 267 l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~ 328 (406)
T 1s1f_A 267 LRSEPE------------------IRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVF 328 (406)
T ss_dssp HHHCGG------------------GHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS
T ss_pred HHhCHH------------------HHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccC
Confidence 999974 79999999999999999 45699999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccc
Q 009899 426 SDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNI 504 (523)
Q Consensus 426 ~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~ 504 (523)
+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++.+ ++....+.+..
T Consensus 329 ~dP~~F~PeR~~------------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~-~~~~~~~~~~~ 395 (406)
T 1s1f_A 329 PDPDRIDFERSP------------NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPE-DVPFKKGALIR 395 (406)
T ss_dssp SSTTSCCTTC--------------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGG-GSCBCSSCSBC
T ss_pred CCcceeCCCCCC------------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCc-cceeccCcccC
Confidence 999999999995 1379999999999999999999999999999999 799987521 22223344556
Q ss_pred cCCCceEEe
Q 009899 505 RATPLEILL 513 (523)
Q Consensus 505 ~~~~~~v~~ 513 (523)
....++|++
T Consensus 396 ~~~~lpv~~ 404 (406)
T 1s1f_A 396 GPEALPVTW 404 (406)
T ss_dssp CBSCCEEEC
T ss_pred CcceeEEee
Confidence 678888876
No 45
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00 E-value=2e-59 Score=454.00 Aligned_cols=373 Identities=16% Similarity=0.201 Sum_probs=298.0
Q ss_pred CCchHHHHHHHHhhCCeEEEEe-cCeeEEEecCHHHHHHHHHhcccccCCCCCc-cccccccC--CCcceeeCCCChhHH
Q 009899 57 QLPHLALGALADKYGPLFSIRI-GVHPALVVSSWEMAKELFTKHDVDISSRPKL-TVGKLLGH--NYANFGFSPYNAYWR 132 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~-~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~g~~w~ 132 (523)
.+++..+.++ ++||||+++++ ++.+.++|+||+++++|+.++ .|++++.. .....+.. .+.+ ++..+|+.|+
T Consensus 37 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~-l~~~dg~~h~ 112 (417)
T 2y5n_A 37 LTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGG-LLSMDPPEHS 112 (417)
T ss_dssp CCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCS-GGGCCTTHHH
T ss_pred cCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCccccccc-CccCCchHHH
Confidence 6778999999 89999999997 889999999999999999865 25544332 11111111 1223 3556899999
Q ss_pred HHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhcccccCcccc
Q 009899 133 EMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYFGARAE 211 (523)
Q Consensus 133 ~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~ 211 (523)
++|+++. +.|+.++++.+.+.+.+.++++++.+... ++ ++|+...+ ..+++++++. +||.+.
T Consensus 113 ~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------~~-~vdl~~~~~~~~~~~vi~~-~~G~~~------ 175 (417)
T 2y5n_A 113 RLRRLVV-KAFTARRAESLRPRAREIAHELVDQMAAT--------GQ-PADLVAMFARQLPVRVICE-LLGVPS------ 175 (417)
T ss_dssp HHHHHHH-HHSCHHHHHHTHHHHHHHHHHHHHHHHHH--------CS-SEEHHHHTTTTHHHHHHHH-HHTCCG------
T ss_pred HHHHHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhC--------CC-CeeHHHHHHHHhHHHHHHH-HcCCCH------
Confidence 9999998 78999999999999999999999998753 43 58998776 4699999997 689876
Q ss_pred cchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHH
Q 009899 212 NDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVL 291 (523)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~l 291 (523)
.+. ..+......++.... . ..++..++.+.+.+++.+.|+++++. ...|+++.|
T Consensus 176 ~~~---~~~~~~~~~~~~~~~-------~----------~~~~~~~~~~~l~~~~~~~i~~r~~~------~~~dll~~l 229 (417)
T 2y5n_A 176 ADH---DRFTRWSGAFLSTAE-------V----------TAEEMQEAAEQAYAYMGDLIDRRRKE------PTDDLVSAL 229 (417)
T ss_dssp GGH---HHHHHHHHTTSTTCC-------C----------CHHHHHHHHHHHHHHHHHHHHHHHHS------CCSSHHHHH
T ss_pred HHH---HHHHHHHHHHhcccC-------C----------CHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCHHHHH
Confidence 222 244444433222100 0 12456677888899999999888763 345899999
Q ss_pred HHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCCh
Q 009899 292 LSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLV 370 (523)
Q Consensus 292 l~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp 370 (523)
++...+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 230 l~~~~~------~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------ 285 (417)
T 2y5n_A 230 VQARDQ------QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE------------------ 285 (417)
T ss_dssp HHCCBT------TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------
T ss_pred Hhhhcc------CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------
Confidence 976431 2245 889999999999999999999999999999999999999999863
Q ss_pred hHHHHHHHHhcCCCCCc-cccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCc
Q 009899 371 YLQAVIKETLRLYPAGP-LAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQH 449 (523)
Q Consensus 371 ~l~a~i~EtlRl~p~~~-~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~ 449 (523)
|++|||+|+||++|+++ ..++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||.
T Consensus 286 ~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------ 353 (417)
T 2y5n_A 286 LIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP------------ 353 (417)
T ss_dssp GHHHHHHHHHHHCCCBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS------------
T ss_pred HHHHHHHHHHHhcCCccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC------------
Confidence 79999999999999999 45699999999999999999999999999999999999999999999982
Q ss_pred ccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEe
Q 009899 450 FELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILL 513 (523)
Q Consensus 450 ~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 513 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++.+ ++....+.+.+....++|++
T Consensus 354 ~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~-~~~~~~~~~~~~~~~lpv~~ 417 (417)
T 2y5n_A 354 NQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPET-QLRWSEGMLLRGPLELPVVW 417 (417)
T ss_dssp CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GCCBCCCSSBCCBSCCEEEC
T ss_pred CCcCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCc-cceeccCcccCCcceeEEeC
Confidence 2479999999999999999999999999999999 599876422 22223444556677787763
No 46
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00 E-value=5.2e-60 Score=457.16 Aligned_cols=373 Identities=17% Similarity=0.167 Sum_probs=300.2
Q ss_pred CCchHHHHHHHHhhCCeEEEEecC--eeEEEecCHHHHHHHHHhcccccCCCCCcc-----ccccccCCCcceeeCCCCh
Q 009899 57 QLPHLALGALADKYGPLFSIRIGV--HPALVVSSWEMAKELFTKHDVDISSRPKLT-----VGKLLGHNYANFGFSPYNA 129 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~--~~~v~v~dp~~~~~il~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~ 129 (523)
++++..+.+++ +||||+++++++ .+.++|++|+++++|+.++ .|++.+... +....+..+.+ ++..+|+
T Consensus 27 ~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~-l~~~dg~ 102 (411)
T 2dkk_A 27 PEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGS-LAFADQP 102 (411)
T ss_dssp SCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTC-STTCCTT
T ss_pred ccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccc-cccCCch
Confidence 56778898887 899999999754 7799999999999999863 355443321 11111110223 4566899
Q ss_pred hHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHH-HHHHHHHHHHHhcccccCc
Q 009899 130 YWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFG-DLNLNVILMMIAGKRYFGA 208 (523)
Q Consensus 130 ~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~ 208 (523)
.|+++|+++. +.|++++++.+++.+.+.++++++.+... |+ ++|+...+. .+++++|+. +||.+.
T Consensus 103 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------g~-~~dl~~~~~~~~~~~vi~~-l~G~~~--- 168 (411)
T 2dkk_A 103 DHNRLRRAVA-GAFTVGATKRLRPRAQEILDGLVDGILAE--------GP-PADLVERVLEPFPIAVVSE-VMGVPA--- 168 (411)
T ss_dssp HHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHHH--------CS-CEEHHHHTTTHHHHHHHHH-HHTCCS---
T ss_pred HHHHHHHHhh-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CeehHHHHHHHHHHHHHHH-HhCCCH---
Confidence 9999999998 89999999999999999999999999764 54 799998775 699999998 599876
Q ss_pred ccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHH
Q 009899 209 RAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFI 288 (523)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~ 288 (523)
.+. ..+......+... .+ ..++..++.+.+.+++.+.|+++++. ...|++
T Consensus 169 ---~~~---~~~~~~~~~~~~~---------~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~------~~~dll 218 (411)
T 2dkk_A 169 ---ADR---ERVHSWTRQIIST---------SG---------GAEAAERAKRGLYGWITETVRARAGS------EGGDVY 218 (411)
T ss_dssp ---SHH---HHHHHHHGGGCSS---------CS---------CSHHHHHHHHHHHHHHHHHHHTTTTC------CSSCHH
T ss_pred ---HHH---HHHHHHHHHHHhc---------cc---------hHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCHH
Confidence 222 2444433332210 11 12455667788888888888876543 345899
Q ss_pred HHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhc
Q 009899 289 DVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIE 367 (523)
Q Consensus 289 ~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~ 367 (523)
+.|++. .++ ..+ ++++.+++..+++|| |||+.+++|++++|++||++|++|++|++
T Consensus 219 ~~ll~~-~~~------~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------- 275 (411)
T 2dkk_A 219 SMLGAA-VGR------GEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG--------------- 275 (411)
T ss_dssp HHHHHH-HHT------TSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT---------------
T ss_pred HHHHHh-cCC------CCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------
Confidence 999987 322 234 678999999999999 99999999999999999999999999974
Q ss_pred CChhHHHHHHHHhcCCCCCccc-cceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCC
Q 009899 368 KLVYLQAVIKETLRLYPAGPLA-GARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVK 446 (523)
Q Consensus 368 ~lp~l~a~i~EtlRl~p~~~~~-~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~ 446 (523)
|++|||+|+||++|+++.. ++|.+++|++++|+.||+|+.|.++.+++||||++|+||++|+||||.
T Consensus 276 ---~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~--------- 343 (411)
T 2dkk_A 276 ---ARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP--------- 343 (411)
T ss_dssp ---CCHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS---------
T ss_pred ---HHHHHHHHHHhhCCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC---------
Confidence 7999999999999999955 699999999999999999999999999999999999999999999995
Q ss_pred CCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCc-ccccCcCCCcccccCCCceEEeeccC
Q 009899 447 GQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEA-WVDMTGTAGLTNIRATPLEILLKPRL 517 (523)
Q Consensus 447 ~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~r~ 517 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++. ++.+. .+.+.....+++|++++|+
T Consensus 344 ---~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~--~~~~~~~~~~lpv~~~~R~ 411 (411)
T 2dkk_A 344 ---NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQVAWR--RKTMIRGPRTLPCTWHHHH 411 (411)
T ss_dssp ---CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGCCBC--CSSSBCCBSCCEEECCCCC
T ss_pred ---CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCCccccccc--cCcccCCcceeEEEeccCC
Confidence 2479999999999999999999999999999999 89987752 23332 3445667889999999985
No 47
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00 E-value=4e-59 Score=453.25 Aligned_cols=351 Identities=19% Similarity=0.203 Sum_probs=290.8
Q ss_pred CCchHHHHHHHHhhCCeEEEEec-CeeEEEecCHHHHHHHHHhcccccCCCCCccccccccC------CCcceeeCCCCh
Q 009899 57 QLPHLALGALADKYGPLFSIRIG-VHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGH------NYANFGFSPYNA 129 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~-~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~ 129 (523)
.+++..+.+++++ |||++++++ +.++++|+||+++++|+.++ .|++++.......... .....++..+|+
T Consensus 29 ~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 105 (417)
T 3tyw_A 29 FAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTDAP 105 (417)
T ss_dssp TSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCHH
T ss_pred cCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcCCc
Confidence 7788999999988 999999986 58999999999999999876 4655432111111100 111234566899
Q ss_pred hHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhcccccCc
Q 009899 130 YWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYFGA 208 (523)
Q Consensus 130 ~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~ 208 (523)
.|+++|+++. +.|+.++++.+.+.+.+.++.+++.+.+. |+ ++|+...+ ..++.++++.+ ||.+. +
T Consensus 106 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------g~-~~d~~~~~~~~~~~~vi~~~-~G~~~-~- 172 (417)
T 3tyw_A 106 EHTRYRRMLL-PAFTVRRVRAMRPAVQARVDEILDGMLAA--------GG-PVDLVSAYANAVSTSVICEL-LGIPR-H- 172 (417)
T ss_dssp HHHHHHHHHG-GGGCHHHHHHTHHHHHHHHHHHHHHHHHH--------CS-SEEHHHHTHHHHHHHHHHHH-HTCCT-T-
T ss_pred HHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHhh--------CC-CcchHHHHHHHHHHHHHHHH-hCCCH-H-
Confidence 9999999998 89999999999999999999999999764 55 79999988 58899999987 99887 2
Q ss_pred ccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHH
Q 009899 209 RAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFI 288 (523)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~ 288 (523)
+.+ .+......+.... + ..++..++.+.+.+++.+.++++++. ...|++
T Consensus 173 ----~~~---~~~~~~~~~~~~~---------~---------~~~~~~~~~~~l~~~~~~~i~~r~~~------~~~d~l 221 (417)
T 3tyw_A 173 ----DLE---FFRDVTRISGSRN---------S---------TAEQVSEALGGLFGLLGGLVAERREE------PRDDLI 221 (417)
T ss_dssp ----TTT---HHHHHHHHHHSSS---------S---------CTTHHHHHHHHHHHHHHHHHHHHHSS------CCSSHH
T ss_pred ----HHH---HHHHHHHHHhccc---------C---------CHHHHHHHHHHHHHHHHHHHHHHhhC------CCCCHH
Confidence 222 3333443332210 0 12345667788889999999888763 346999
Q ss_pred HHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhc
Q 009899 289 DVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIE 367 (523)
Q Consensus 289 ~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~ 367 (523)
+.|++...++ ..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 222 ~~ll~~~~~~------~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------- 280 (417)
T 3tyw_A 222 SKLVTDHLVP------GNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD--------------- 280 (417)
T ss_dssp HHHHHHTTTT------TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG---------------
T ss_pred HHHHHhcccC------CCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH---------------
Confidence 9999875443 135 889999999999999999999999999999999999999999975
Q ss_pred CChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCC
Q 009899 368 KLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKG 447 (523)
Q Consensus 368 ~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~ 447 (523)
|++|||+|+||++|+++..++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||.
T Consensus 281 ---~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------- 347 (417)
T 3tyw_A 281 ---LMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD---------- 347 (417)
T ss_dssp ---GHHHHHHHHHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC----------
T ss_pred ---HHHHHHHHHHHhccccccCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC----------
Confidence 7999999999999999986699999999999999999999999999999999999999999999993
Q ss_pred CcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCC
Q 009899 448 QHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGE 490 (523)
Q Consensus 448 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~ 490 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++..+
T Consensus 348 --~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~ 389 (417)
T 3tyw_A 348 --NHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGE 389 (417)
T ss_dssp --CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred --CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence 2479999999999999999999999999999999 9998754
No 48
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00 E-value=4.9e-60 Score=459.65 Aligned_cols=381 Identities=19% Similarity=0.211 Sum_probs=302.8
Q ss_pred CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCC-----cc-c--cccccCC-CcceeeCCC
Q 009899 57 QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPK-----LT-V--GKLLGHN-YANFGFSPY 127 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~-----~~-~--~~~~~~~-~~~~~~~~~ 127 (523)
.+++..+.++ ++||||++ + ++.+.++|+||+++++|+.++. |++++. .. . ....+.. + ..++..+
T Consensus 26 ~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~ 99 (419)
T 1q5d_A 26 EDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKK-YGLFGLP 99 (419)
T ss_dssp TCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHH-HSTTTSC
T ss_pred hChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcc-cccccCC
Confidence 6788899998 78999999 6 7778999999999999998764 776651 11 1 0111100 1 1234567
Q ss_pred ChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHH-HHHHHHHHHHHHHhccccc
Q 009899 128 NAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKW-FGDLNLNVILMMIAGKRYF 206 (523)
Q Consensus 128 g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~-~~~~~~~~i~~~~fG~~~~ 206 (523)
|+.|+++|+++. +.|+.++++.+++.+.+.++++++.+... + ++|+... +..+++++|+.+ ||.+.
T Consensus 100 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------~--~~d~~~~~~~~~~~~vi~~~-fG~~~- 166 (419)
T 1q5d_A 100 PEDHARVRKLVN-PSFTSRAIDLLRAEIQRTVDQLLDARSGQ--------E--EFDVVRDYAEGIPMRAISAL-LKVPA- 166 (419)
T ss_dssp HHHHHHHHHHHG-GGGSHHHHGGGHHHHHHHHHHHHHHHTTS--------S--CEETTTTTGGGSHHHHHHHH-TTCCG-
T ss_pred chHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHhc--------C--CCCHHHHHHHHHHHHHHHHH-hCCCH-
Confidence 999999999998 89999999999999999999999988541 3 6898754 489999999998 99877
Q ss_pred CcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCc-
Q 009899 207 GARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDL- 285 (523)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~- 285 (523)
.+.+ .+....+.+..... ...+|+.. ...++..++.+.+.+++.+.|+++++. ...
T Consensus 167 -----~~~~---~~~~~~~~~~~~~~----~~~~P~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~~ 223 (419)
T 1q5d_A 167 -----ECDE---KFRRFGSATARALG----VGLVPRVD-----EETKTLVASVTEGLALLHGVLDERRRN------PLEN 223 (419)
T ss_dssp -----GGHH---HHHHHHHHHHHHTT----TTTSSCCC-----SCHHHHHHHHHHHHHHHHHHHHHHHHS------CCSS
T ss_pred -----HHHH---HHHHHHHHHHHhcc----cccccCCh-----HHHHHHHHHHHHHHHHHHHHHHHHHhC------CCCC
Confidence 2222 34444444433211 11233221 123566778888999999999888763 234
Q ss_pred cHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChh
Q 009899 286 DFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCES 364 (523)
Q Consensus 286 d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 364 (523)
|+++.|++...+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 224 dll~~ll~~~~~------~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------ 285 (419)
T 1q5d_A 224 DVLTMLLQAEAD------GSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG------------ 285 (419)
T ss_dssp CHHHHHHHHHHS------STTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------
T ss_pred CHHHHHHhhhcc------CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------
Confidence 899999987432 2245 889999999999999999999999999999999999999999952
Q ss_pred hhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCC
Q 009899 365 DIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVD 444 (523)
Q Consensus 365 ~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~ 444 (523)
|++|||+|+||++|+++..++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+|||| +
T Consensus 286 ------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~--~----- 352 (419)
T 1q5d_A 286 ------LMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD--T----- 352 (419)
T ss_dssp ------GHHHHHHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC--C-----
T ss_pred ------HHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCC--C-----
Confidence 899999999999999996679999999999999999999999999999999999999999999994 1
Q ss_pred CCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEeeccCCC
Q 009899 445 VKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLKPRLPS 519 (523)
Q Consensus 445 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~ 519 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++. .+. .+.+..+..+++|+++||.+|
T Consensus 353 -----~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~--~~~~~~~~~~l~v~~~~r~~~ 419 (419)
T 1q5d_A 353 -----SASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETP--VFG--YHPAFRNIESLNVILKPSKAG 419 (419)
T ss_dssp -----TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC--EEC--CCSSBCCEEECEEESSCC---
T ss_pred -----CCCCCCCCCCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCCc--ccc--cccccCCCceeEEEEecCCCC
Confidence 2479999999999999999999999999999999 89987752 232 344566788999999999864
No 49
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00 E-value=1.4e-59 Score=455.07 Aligned_cols=385 Identities=20% Similarity=0.206 Sum_probs=300.1
Q ss_pred cccccccccC---CCCchHHHHHHHHhhCCeE-----EEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc--cc-cc
Q 009899 46 MIGHLHLLAG---PQLPHLALGALADKYGPLF-----SIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT--VG-KL 114 (523)
Q Consensus 46 ~~G~~~~~~~---~~~~~~~~~~~~~kyG~v~-----~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~--~~-~~ 114 (523)
..|+.+.+.. ..+++.++.+++ +||||+ ++++ .+.++|+||+++++|+.++ ..|++++... +. ..
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~ 86 (414)
T 2uuq_A 11 VMSHEFQLATAETWPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELE 86 (414)
T ss_dssp --CCSCCCCCTTTTTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHH
T ss_pred hhcCccCcCChhhccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCccc
Confidence 3444444432 256788888885 799999 8765 5789999999999999876 4577665432 11 01
Q ss_pred c-c-CCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHH-HHHHHH
Q 009899 115 L-G-HNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMK-KWFGDL 191 (523)
Q Consensus 115 ~-~-~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~-~~~~~~ 191 (523)
+ + ..+.++ +..+|+.|+++|+++. +.|++++++.+.+.+.+.++++++.+.+. + .+|+. +++..+
T Consensus 87 ~~~~~~~~~l-~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------~--~vdl~~~~~~~~ 154 (414)
T 2uuq_A 87 MIGLHDTPPM-VMQDPPVHTEFRKLVS-RGFTPRQVETVEPTVRKFVVERLEKLRAN--------G--GGDIVTELFKPL 154 (414)
T ss_dssp HHTCSSSCCG-GGCCTTHHHHHHHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHHT--------T--EEEHHHHTTTHH
T ss_pred cccccccccc-ccCCchhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhc--------C--CccHHHHHHHHh
Confidence 2 2 222234 4458999999999998 89999999999999999999999998662 3 58997 566899
Q ss_pred HHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccc-cccccccccccHHHHHHHHHHHHHHHHHHH
Q 009899 192 NLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDAL-PFLGWLDIGGYEKAMKKTAKELDSLIEEWI 270 (523)
Q Consensus 192 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i 270 (523)
++++++. +||.+. .+.+ .+....+.++.. ..+ |.. .+..++.+.+.+++.+.|
T Consensus 155 ~~~vi~~-~~G~~~------~~~~---~~~~~~~~~~~~-------~~~~p~~---------~~~~~~~~~~~~~~~~~i 208 (414)
T 2uuq_A 155 PSMVVAH-YLGVPE------EDWT---QFDGWTQAIVAA-------NAVDGAT---------TGALDAVGSMMAYFTGLI 208 (414)
T ss_dssp HHHHHHH-HTTCCG------GGHH---HHHHHHHHHHHH-------HHC--------------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HhCCCH------HHHH---HHHHHHHHHHhh-------cccCCch---------hHHHHHHHHHHHHHHHHH
Confidence 9999998 689877 2222 344444333321 011 210 123346677888888888
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHH
Q 009899 271 EEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKK 349 (523)
Q Consensus 271 ~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~ 349 (523)
+++++. ...|+++.|++...++ .+..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++
T Consensus 209 ~~r~~~------~~~dll~~ll~~~~~~----~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~ 278 (414)
T 2uuq_A 209 ERRRTE------PADDAISHLVAAGVGA----DGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLD 278 (414)
T ss_dssp HHHTTS------CCSSHHHHHHHTTTTC----TTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHhC------CCCCHHHHHHhccccc----CCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHh
Confidence 877653 3468999999864311 13356 889999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCC-CCC
Q 009899 350 ELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVW-SDP 428 (523)
Q Consensus 350 Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p 428 (523)
|++ |++|||+|+||++|+++ .++|.+++|++++||.||+|+.|.++.+++||||++| +||
T Consensus 279 E~~------------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP 339 (414)
T 2uuq_A 279 DPE------------------GIPDAVEELLRLTSPVQ-GLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDA 339 (414)
T ss_dssp CGG------------------GHHHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTT
T ss_pred CHH------------------HHHHHHHHHHHhCCCcC-CcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCc
Confidence 873 89999999999999999 5699999999999999999999999999999999999 999
Q ss_pred CCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCC
Q 009899 429 LEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRAT 507 (523)
Q Consensus 429 ~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 507 (523)
++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.+ .++.+ ..+.+..+..
T Consensus 340 ~~F~PeR~~------------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~-~~~~~--~~~~~~~~~~ 404 (414)
T 2uuq_A 340 AELDVTRCP------------RNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAE-SRIVW--SGGSYVRRPL 404 (414)
T ss_dssp TSCCTTCCC------------CSCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEECG-GGCEE--CCCSSBCCEE
T ss_pred hhcCCCCCC------------CCCcCCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECC-CCccc--cccccccCcc
Confidence 999999994 1379999999999999999999999999999999 699873 22333 2345566788
Q ss_pred CceEEeecc
Q 009899 508 PLEILLKPR 516 (523)
Q Consensus 508 ~~~v~~~~r 516 (523)
+++|+++||
T Consensus 405 ~lpv~~~~r 413 (414)
T 2uuq_A 405 SVPFRVTSS 413 (414)
T ss_dssp ECEEEEC--
T ss_pred eeEEEecCC
Confidence 999999987
No 50
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00 E-value=1.6e-58 Score=445.28 Aligned_cols=366 Identities=16% Similarity=0.184 Sum_probs=294.3
Q ss_pred CCchHHHHHHHHhhCCeEEEEe-cCeeEEEecCHHHHHHHHHhcccccCCCCCcc-ccccccCCCcce-eeCCCC-----
Q 009899 57 QLPHLALGALADKYGPLFSIRI-GVHPALVVSSWEMAKELFTKHDVDISSRPKLT-VGKLLGHNYANF-GFSPYN----- 128 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~-~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~g----- 128 (523)
.+++..+.++ ++||||+++++ ++.+.++|+||+++++|+.++. |++++... ....... +.+. ++..+|
T Consensus 26 ~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~-~~~~~l~~~~g~~~~~ 101 (404)
T 2xbk_A 26 LKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDER--IGRTHPDPPSAAQYVR-SPFLDLLISDADAESG 101 (404)
T ss_dssp TBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCTT--EESBCSSGGGSCCSSC-CHHHHTTCBCSCHHHH
T ss_pred cCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCCC--CCCCccccccCCcccc-cccccceeeCCCCCCC
Confidence 5678899999 89999999997 7899999999999999998752 55554322 1111111 2231 445679
Q ss_pred -hhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhccccc
Q 009899 129 -AYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYF 206 (523)
Q Consensus 129 -~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~ 206 (523)
+.|+++|+++. +.|++++++.+.+.+.+.++++++.+... |+ ++|+...+ ..+++++++. +||.+.
T Consensus 102 ~~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------g~-~~d~~~~~~~~~~~~vi~~-~~G~~~- 169 (404)
T 2xbk_A 102 RRQHAETRRLLT-PLFSARRVLEMQPKVEEAADTLLDAFIAQ--------GP-PGDLHGELTVPFALTVLCE-VIGVPP- 169 (404)
T ss_dssp HHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHT--------CS-SEEHHHHTHHHHHHHHHHH-HHTCCG-
T ss_pred CchHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CeeHHHHHHHHHHHHHHHH-HhCCCH-
Confidence 99999999998 88999999999999999999999998752 54 79998766 5799999997 789876
Q ss_pred CcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 009899 207 GARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLD 286 (523)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d 286 (523)
.+. ..+...+..++... .| .+..++.+.+.+++.+.|+++++. ...|
T Consensus 170 -----~~~---~~~~~~~~~~~~~~--------~~-----------p~~~~~~~~~~~~~~~~i~~r~~~------~~~d 216 (404)
T 2xbk_A 170 -----QRR---AELTTLLAGIAKLD--------DR-----------EGAVRAQDDLFGYVAGLVEHKRAE------PGPD 216 (404)
T ss_dssp -----GGH---HHHHHHHHHHTBSS--------CH-----------HHHHHHHHHHHHHHHHHHHHHHHS------CCSS
T ss_pred -----HHH---HHHHHHHHHHHhcc--------Cc-----------HHHHHHHHHHHHHHHHHHHHHHhC------CCCC
Confidence 222 24555544433210 00 145567778888999999887764 2358
Q ss_pred HHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhh
Q 009899 287 FIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESD 365 (523)
Q Consensus 287 ~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 365 (523)
+++.| + + + .+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 217 ll~~l-~----~-----~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------- 272 (404)
T 2xbk_A 217 IISRL-N----D-----G-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD------------- 272 (404)
T ss_dssp HHHHH-H----S-----S-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH-------------
T ss_pred HHHHh-h----c-----C-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------
Confidence 99888 2 2 2 44 889999999999999999999999999999999999999999975
Q ss_pred hcCChhHHHHHHHHhcCCCCCc-cccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCC
Q 009899 366 IEKLVYLQAVIKETLRLYPAGP-LAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVD 444 (523)
Q Consensus 366 ~~~lp~l~a~i~EtlRl~p~~~-~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~ 444 (523)
|++|||+|+||++|+++ ..++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||.
T Consensus 273 -----~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------- 340 (404)
T 2xbk_A 273 -----VMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP------- 340 (404)
T ss_dssp -----HHHHHHHHHHHHSCSSCCBCSCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS-------
T ss_pred -----HHHHHHHHHHHhCCCccccccceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC-------
Confidence 79999999999999999 45699999999999999999999999999999999999999999999993
Q ss_pred CCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEe
Q 009899 445 VKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILL 513 (523)
Q Consensus 445 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 513 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++.+ ++....+.+......++|++
T Consensus 341 -----~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~-~~~~~~~~~~~~~~~lpv~~ 404 (404)
T 2xbk_A 341 -----NPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPVE-QLRLKEGQLSGGFAELRVVW 404 (404)
T ss_dssp -----CCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GCCBCSSBTTCCBSCCEEEC
T ss_pred -----CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCCCC-cceeccCcccCCcceeeeeC
Confidence 2479999999999999999999999999999999 799876522 22223444556677887763
No 51
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.3e-59 Score=449.80 Aligned_cols=375 Identities=17% Similarity=0.158 Sum_probs=300.4
Q ss_pred CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccccccCCCcceeeCCCChhHHHHHH
Q 009899 57 QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRK 136 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 136 (523)
.+++..+.++++ |||||++. . +.++|+||+++++|+.++. .|++++... .... .+.+ ++..+|+.|+++|+
T Consensus 18 ~~p~~~~~~l~~-~Gpv~~~~--~-~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~--~~~~-l~~~~g~~h~~~R~ 88 (398)
T 2xkr_A 18 REARAAYRWMRA-NQPVFRDR--N-GLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQP--ALPM-MIDMDDPAHLLRRK 88 (398)
T ss_dssp TTHHHHHHHHHH-HCSEEECT--T-CCEEECSHHHHHHHHTCTT-TEESTTCSS-TTSC--CCSS-GGGCCTTHHHHHHH
T ss_pred cChhHHHHHHHh-cCCeeecC--C-CeEEEecHHHHHHHHhCcc-cccCccccC-Cccc--cccc-ccccCchHHHHHHH
Confidence 678889999987 99999763 3 7899999999999998754 566665432 1111 1223 44567999999999
Q ss_pred hHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHH-HHHHHHHHHHHHHHHhcccccCcccccchH
Q 009899 137 ITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMK-KWFGDLNLNVILMMIAGKRYFGARAENDET 215 (523)
Q Consensus 137 ~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~-~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~ 215 (523)
++. +.|++++++.+.+.+.+.++++++.+... + ++|+. +++..+++++|+.+ ||.+. .+.
T Consensus 89 ~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------~--~~d~~~~~~~~~~~~vi~~~-fG~~~------~~~- 149 (398)
T 2xkr_A 89 LVN-AGFTRKRVKDKEASIAALCDTLIDAVCER--------G--ECDFVRDLAAPLPMAVIGDM-LGVRP------EQR- 149 (398)
T ss_dssp HHG-GGSCHHHHHTTHHHHHHHHHHHHHTTTTT--------S--EEEHHHHTTTHHHHHHHHHH-HTCCG------GGH-
T ss_pred Hhh-hhhCHHHHHHHHHHHHHHHHHHHHhhhhc--------C--CccHHHHHHHHHHHHHHHHH-hCCCH------HHH-
Confidence 997 89999999999999999999998887431 3 68999 45568999999998 99887 222
Q ss_pred HHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHh
Q 009899 216 EVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVL 295 (523)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~ 295 (523)
..+......+.... .|.+ + +...++..++.+.+.+++.+.|+++++. ...|+++.|++..
T Consensus 150 --~~~~~~~~~~~~~~--------~~~~--~--p~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~dll~~ll~~~ 209 (398)
T 2xkr_A 150 --DMFLRWSDDLVTFL--------SSHV--S--QEDFQITMDAFAAYNDFTRATIAARRAD------PTDDLVSVLVSSE 209 (398)
T ss_dssp --HHHHHHHHHHHHHH--------TSCC--C--HHHHHHHHHHHHHHHHHHHHHHHHHHHS------CCSSHHHHHHHCC
T ss_pred --HHHHHHHHHHHhcc--------Cccc--c--hhhHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCHHHHHHHhh
Confidence 23444444443211 1111 1 1223556677788899999999888762 3468999999764
Q ss_pred hhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHH
Q 009899 296 EGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQA 374 (523)
Q Consensus 296 ~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a 374 (523)
.+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++ |++|
T Consensus 210 ~~------~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a 265 (398)
T 2xkr_A 210 VD------GERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS------------------LLPG 265 (398)
T ss_dssp BT------TBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHH
T ss_pred cc------CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHH
Confidence 32 2245 889999999999999999999999999999999999999999975 8999
Q ss_pred HHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccc
Q 009899 375 VIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLP 454 (523)
Q Consensus 375 ~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~ 454 (523)
||+|+||++|+++. ++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||.. .++|
T Consensus 266 ~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~------------~~l~ 332 (398)
T 2xkr_A 266 AIEEMLRWTAPVKN-MCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPN------------SHLA 332 (398)
T ss_dssp HHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSSC------------CCCT
T ss_pred HHHHHHhhcccccC-cceEECCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCCC------------CCCc
Confidence 99999999999997 6999999999999999999999999999999999999999999999841 2799
Q ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccC-cCCCcccccCCCceEEeeccCC
Q 009899 455 FGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMT-GTAGLTNIRATPLEILLKPRLP 518 (523)
Q Consensus 455 Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~r~~ 518 (523)
||.|+|.|+|++||++|++++++.|+++| ++++.++. ++. ...+.+.....+++|+++||..
T Consensus 333 FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~lpv~~~p~~r 396 (398)
T 2xkr_A 333 FGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVADD--SVLPLRPANFVSGLESMPVVFTPSPP 396 (398)
T ss_dssp TCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESCTT--CCCCBCCCSSBCCBSCCEEECCCCCC
T ss_pred CCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceECCCc--ceecccCcccccCccceeEEecCCCC
Confidence 99999999999999999999999999999 59987533 231 0233445567899999999865
No 52
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00 E-value=2e-59 Score=455.51 Aligned_cols=378 Identities=17% Similarity=0.178 Sum_probs=294.6
Q ss_pred CCchHHHHHHHHhhCCeEEEEec--CeeEEEecCHHHHHHHHHhcccccCCCCCc--------c--cc---c-cccCCCc
Q 009899 57 QLPHLALGALADKYGPLFSIRIG--VHPALVVSSWEMAKELFTKHDVDISSRPKL--------T--VG---K-LLGHNYA 120 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~--~~~~v~v~dp~~~~~il~~~~~~~~~~~~~--------~--~~---~-~~~~~~~ 120 (523)
.+++.++.+++ +||||+++++| +.++++|+||+.+++|+.++ .|++++.. . .. . ....++.
T Consensus 20 ~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (425)
T 2z3t_A 20 ADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVEN 96 (425)
T ss_dssp HCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHTT
T ss_pred cChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccccc
Confidence 56788888886 59999999987 67899999999999999875 47666531 0 00 0 0011112
Q ss_pred ceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHH
Q 009899 121 NFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMM 199 (523)
Q Consensus 121 ~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~ 199 (523)
++ +..+|+.|+++|+++. +.|+.++++.+.+.+.+.++++++.+... | ++|+...+ ..+++++++.+
T Consensus 97 ~l-~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------g--~~dl~~~~~~~~~~~vi~~~ 164 (425)
T 2z3t_A 97 WL-VFLDPPHHTELRSLLT-TEFSPSIVTGLRPRIAELASALLDRLRAQ--------R--RPDLVEGFAAPLPILVISAL 164 (425)
T ss_dssp CG-GGCCHHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTTS--------S--SCBHHHHTTTHHHHHHHHHH
T ss_pred cc-ccCCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------C--CccHHHHHHHHHHHHHHHHH
Confidence 33 4457999999999998 89999999999999999999999988541 4 68988754 78999999998
Q ss_pred HhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 009899 200 IAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKES 279 (523)
Q Consensus 200 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 279 (523)
||.+. .+.+ .+......+..... .+| + .....++..++.+.+.+++.+.|+++++.
T Consensus 165 -~G~~~------~~~~---~~~~~~~~~~~~~~------~~~----~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--- 220 (425)
T 2z3t_A 165 -LGIPE------EDHT---WLRANAVALQEAST------TRA----R-DGRGYARAEAASQEFTRYFRREVDRRGGD--- 220 (425)
T ss_dssp -HTCCG------GGHH---HHHHHHHHHHTTCT------TCC----C----HHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred -hCCCH------HHHH---HHHHHHHHHHhhcc------ccC----C-CHHHHHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence 99876 2222 44444444433211 112 1 01123556677778888888888776653
Q ss_pred CCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCC
Q 009899 280 GANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKE 358 (523)
Q Consensus 280 ~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~ 358 (523)
...|+++.|++...+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 221 ---~~~dll~~ll~~~~~------~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------ 285 (425)
T 2z3t_A 221 ---DRDDLLTLLVRARDT------GSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE------ 285 (425)
T ss_dssp ------CHHHHHHHHHHT------TCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG------
T ss_pred ---CCCCHHHHHHHhhcc------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH------
Confidence 346899999987543 1245 889999999999999999999999999999999999999999964
Q ss_pred CCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccC
Q 009899 359 RLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLT 438 (523)
Q Consensus 359 ~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~ 438 (523)
|++|||+|+||++|+++ .++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||.
T Consensus 286 ------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~- 351 (425)
T 2z3t_A 286 ------------STPAAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA- 351 (425)
T ss_dssp ------------GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS-
T ss_pred ------------hHHHHHHHHHHhCCccc-CcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC-
Confidence 89999999999999999 5699999999999999999999999999999999999999999999995
Q ss_pred CCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEeecc
Q 009899 439 AHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLKPR 516 (523)
Q Consensus 439 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r 516 (523)
..++|||.|+|.|+|++||++|++++++.|+++| +++ .++.+..+ ..+.+..+..+++|++++.
T Consensus 352 -----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~~~~--~~~~~~~~~~~lpv~~~~~ 416 (425)
T 2z3t_A 352 -----------ERQVGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAHEVEY--ADDMVFHGPTRLLLDLPDA 416 (425)
T ss_dssp -----------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEEEEE--CSCSSBCCEEEEEECCC--
T ss_pred -----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCcccc--ccccccCCcceeeEEecch
Confidence 2479999999999999999999999999999999 899 66532223 2344556778899988775
No 53
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00 E-value=7.2e-59 Score=449.51 Aligned_cols=370 Identities=18% Similarity=0.223 Sum_probs=298.0
Q ss_pred CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCc--c-----cc---cc-cc---CCCcce
Q 009899 57 QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKL--T-----VG---KL-LG---HNYANF 122 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~--~-----~~---~~-~~---~~~~~~ 122 (523)
.+++..+.++ ++||||+++++++.+.++|+||+++++|+.++ .|++++.. . +. .. .. ..+.+
T Consensus 14 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 89 (404)
T 1z8o_A 14 VDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN- 89 (404)
T ss_dssp SSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS-
T ss_pred cCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcccc-
Confidence 6788899999 99999999999999999999999999999876 46666542 1 10 11 00 01223
Q ss_pred eeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHh
Q 009899 123 GFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIA 201 (523)
Q Consensus 123 ~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~f 201 (523)
++..+|+.|+++|+++. +.|+.++++.+.+.+.+.++++++.+.. ++ ++|+...+ ..+++++++.+ |
T Consensus 90 l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---------~~-~~d~~~~~~~~~~~~vi~~~-~ 157 (404)
T 1z8o_A 90 MGTSDPPTHTRLRKLVS-QEFTVRRVEAMRPRVEQITAELLDEVGD---------SG-VVDIVDRFAHPLPIKVICEL-L 157 (404)
T ss_dssp GGGCCTTHHHHHHHHHH-TTSCHHHHHHTHHHHHHHHHHHHHTSCS---------SS-EEEHHHHTTTHHHHHHHHHH-T
T ss_pred cccCCCcHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhhhh---------cC-CcchHHHHhHHHHHHHHHHH-h
Confidence 34568999999999998 8999999999999999999998887632 33 79998765 68999999984 8
Q ss_pred cccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 009899 202 GKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGA 281 (523)
Q Consensus 202 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~ 281 (523)
|.+. + +.+ .+...++.++. . ..| . .++..++.+.+.+++.+.|+++++.
T Consensus 158 G~~~-~-----~~~---~~~~~~~~~~~-~-------~~p--------~-~~~~~~~~~~~~~~~~~~i~~r~~~----- 206 (404)
T 1z8o_A 158 GVDE-K-----YRG---EFGRWSSEILV-M-------DPE--------R-AEQRGQAAREVVNFILDLVERRRTE----- 206 (404)
T ss_dssp TCCG-G-----GTT---THHHHHHHHHC-C-------CGG--------G-HHHHHHHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCH-H-----HHH---HHHHHHHHHhc-c-------CCh--------h-HHHHHHHHHHHHHHHHHHHHHHHhC-----
Confidence 9876 2 222 33444444332 1 001 1 3556677888899999999888763
Q ss_pred CCCccHHHHHHHH-hhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCC
Q 009899 282 NLDLDFIDVLLSV-LEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKER 359 (523)
Q Consensus 282 ~~~~d~~~~ll~~-~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~ 359 (523)
...|+++.|++. .+ + +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 207 -~~~dll~~ll~~~~~-~-----~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------- 272 (404)
T 1z8o_A 207 -PGDDLLSALIRVQDD-D-----DGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS------- 272 (404)
T ss_dssp -CCSSHHHHHHHCEET-T-----TEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------
T ss_pred -CCCCHHHHHHhhhcc-c-----CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------
Confidence 345899999976 32 1 2245 889999999999999999999999999999999999999999863
Q ss_pred CCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCC
Q 009899 360 LLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTA 439 (523)
Q Consensus 360 ~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~ 439 (523)
|++|||+|+||++|+++ .++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||.
T Consensus 273 -----------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~-- 338 (404)
T 1z8o_A 273 -----------ALPNAVEEILRYIAPPE-TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT-- 338 (404)
T ss_dssp -----------GHHHHHHHHHHHTCSSC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC--
T ss_pred -----------hHHHHHHHHHHhcCCcc-CcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC--
Confidence 79999999999999999 5699999999999999999999999999999999999999999999983
Q ss_pred CCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCc-ccccCcCCCcccccCCCceEEe
Q 009899 440 HKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEA-WVDMTGTAGLTNIRATPLEILL 513 (523)
Q Consensus 440 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~ 513 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++. ++.+ ..+.+.++..+++|++
T Consensus 339 ----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~--~~~~~~~~~~~l~v~~ 402 (404)
T 1z8o_A 339 ----------RGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVW--RRSLLLRGIDHLPVRL 402 (404)
T ss_dssp ----------TTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCC--CCCSSSCCCSCCEEET
T ss_pred ----------CCccCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCCCccee--ccccccCCcceeEEEe
Confidence 2479999999999999999999999999999999 58987642 2333 3455666778888876
No 54
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00 E-value=4.8e-59 Score=449.97 Aligned_cols=374 Identities=17% Similarity=0.160 Sum_probs=297.3
Q ss_pred CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc-cc------ccccCCCcceeeCCCCh
Q 009899 57 QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT-VG------KLLGHNYANFGFSPYNA 129 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~g~ 129 (523)
.+++.++..+ ++||||++ + +.+.++|+||+++++|+.++ .|++++... +. ...+..+.+ ++..+|+
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~ 85 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGDE--RFARTGIRRFWTDLVGPGLLAEIVGDI-ILFQDEP 85 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTCT--TEESHHHHHHHHHHHCSSHHHHHHTTC-GGGCCTT
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcCC--CcccCcccccccccccccccccccccc-cccCCch
Confidence 4567788766 58999999 6 57899999999999999863 355443211 00 011100123 3455799
Q ss_pred hHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHH-HHHHHHHHHHHHHhcccccCc
Q 009899 130 YWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKW-FGDLNLNVILMMIAGKRYFGA 208 (523)
Q Consensus 130 ~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~-~~~~~~~~i~~~~fG~~~~~~ 208 (523)
.|+++|+++. +.|+.++++.+.+.+.+.++++++.+.. ++ ++|+... ...+++++++.+ ||.+.
T Consensus 86 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---------~~-~~dl~~~~~~~~~~~vi~~~-~G~~~--- 150 (397)
T 3buj_A 86 DHGRLRGVVG-PAFSPSALRRLEPVIAGTVDDLLRPALA---------RG-AMDVVDELAYPLALRAVLGL-LGLPA--- 150 (397)
T ss_dssp HHHHHHHHHG-GGSSTTTTGGGHHHHHHHHHHHHHHHHT---------TT-EEEHHHHTHHHHHHHHHHHH-HTCCG---
T ss_pred hHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHhh---------cC-CeehHHHHHHHhHHHHHHHH-hCCCH---
Confidence 9999999998 7999999999999999999999998854 22 6898754 578999999998 99877
Q ss_pred ccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHH
Q 009899 209 RAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFI 288 (523)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~ 288 (523)
.+. ..+......+...... . + .....++..++.+.+.+++.+.|+++++. ...|++
T Consensus 151 ---~~~---~~~~~~~~~~~~~~~~--------~---~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~dll 206 (397)
T 3buj_A 151 ---ADW---GAVGRWSRDVGRTLDR--------G---A-SAEDMRRGHAAIAEFADYVERALARRRRE------GGEDLL 206 (397)
T ss_dssp ---GGH---HHHHHHHHHHHGGGCS--------S---C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCSHH
T ss_pred ---HHH---HHHHHHHHHHHhhcCC--------C---C-ChHHHHHHHHHHHHHHHHHHHHHHHHHcC------CCCCHH
Confidence 222 2444444444332110 0 1 11123556677888899999999888764 245899
Q ss_pred HHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhc
Q 009899 289 DVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIE 367 (523)
Q Consensus 289 ~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~ 367 (523)
+.|++..++ +. + ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 207 ~~ll~~~~~------~~-ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------- 264 (397)
T 3buj_A 207 ALMLDAHDR------GL-MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD--------------- 264 (397)
T ss_dssp HHHHHHHHT------TS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG---------------
T ss_pred HHHHHhhhc------CC-CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH---------------
Confidence 999987532 12 5 889999999999999999999999999999999999999999963
Q ss_pred CChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCC
Q 009899 368 KLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKG 447 (523)
Q Consensus 368 ~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~ 447 (523)
|++|||+|+||++|+++ .++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||.
T Consensus 265 ---~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~---------- 330 (397)
T 3buj_A 265 ---LLAQAVEECLRYDPSVQ-SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP---------- 330 (397)
T ss_dssp ---GHHHHHHHHHHHSCSCC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC----------
T ss_pred ---HHHHHHHHHHhhcCccc-CcceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC----------
Confidence 89999999999999999 5699999999999999999999999999999999999999999999994
Q ss_pred CcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCC-cccccCcCCCcccccCCCceEEeeccC
Q 009899 448 QHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGE-AWVDMTGTAGLTNIRATPLEILLKPRL 517 (523)
Q Consensus 448 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r~ 517 (523)
..++|||.|+|.|+|++||++|++++++.| ++| ++++.++ .++.+ ..+.+..+..+++|+++||.
T Consensus 331 --~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~~~~~~~--~~~~~~~~~~~l~v~~~~rg 397 (397)
T 3buj_A 331 --VPSMSFGAGMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCASDALAY--QPRTMFRGLASLPIAFTPGG 397 (397)
T ss_dssp --CCCSTTCCGGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSCSTTCCB--CSCSSCCCBSCCEEECCTTC
T ss_pred --CCCCCCCCCCccCCCHHHHHHHHHHHHHHH-hcCCCceeCCCCccccc--ccccccCCCcceeEEecCCC
Confidence 236999999999999999999999999999 999 8998775 32333 23455667899999999984
No 55
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00 E-value=5.6e-61 Score=478.90 Aligned_cols=415 Identities=14% Similarity=0.116 Sum_probs=293.5
Q ss_pred cCCCCCCCCCCCCCccccccccccC---CCCchHHHHHHHHhhCC-eEEEEecCeeE-------EEecCHHHHHHHHHhc
Q 009899 31 SNTGKKPPEAAGKWPMIGHLHLLAG---PQLPHLALGALADKYGP-LFSIRIGVHPA-------LVVSSWEMAKELFTKH 99 (523)
Q Consensus 31 ~~~~~~~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~-v~~i~~~~~~~-------v~v~dp~~~~~il~~~ 99 (523)
...|.+.||||.++|++|+++.+.. .++++.++.++++|||+ ||++++++.++ +++++++..+.++...
T Consensus 23 ~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~ 102 (495)
T 3dsk_A 23 KDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVD 102 (495)
T ss_dssp -CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccc
Confidence 3457789999999999999987741 26788999999999999 99999988887 6677777766665432
Q ss_pred c----cccCCCCCccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhccc
Q 009899 100 D----VDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKN 175 (523)
Q Consensus 100 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 175 (523)
. ..+........ .+++.......+..+|+.|+++|+++. +.|+... +.+.+.+.+.++++++.|.+. ...
T Consensus 103 ~v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~-~~f~~~~-~~~~~~i~~~~~~ll~~~~~~---~~~ 176 (495)
T 3dsk_A 103 KVEKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLF-FLLKSSR-NRIFPEFQATYSELFDSLEKE---LSL 176 (495)
T ss_dssp TEECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHH-HHHHHTT-TTHHHHHHHHHHHHHHHHHHH---HHH
T ss_pred cccccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHH---hcc
Confidence 1 11211111112 344433333445568999999999998 6787654 889999999999999999764 222
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHH
Q 009899 176 ESDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAM 255 (523)
Q Consensus 176 ~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~ 255 (523)
+. ++|+.++++.+++++++.++||.+. +.. +.. ..+...++...... ..|.+... ..
T Consensus 177 --~~-~vdl~~~~~~~~~~~i~~~~~G~~~-~~~--~~~---~~~~~~~~~~~~~~-------~~p~~~~~-~p------ 233 (495)
T 3dsk_A 177 --KG-KADFGGSSDGTAFNFLARAFYGTNP-ADT--KLK---ADAPGLITKWVLFN-------LHPLLSIG-LP------ 233 (495)
T ss_dssp --HS-SEESHHHHHHHHHHHHHHHHHSCCG-GGS--TTT---TCHHHHHHHHHHHH-------HGGGCCCS-SC------
T ss_pred --CC-CccHHHHHHHHHHHHHHHHHcCCCc-chh--hhh---hhHHHHHHHHHHHh-------hhhHhHhc-cH------
Confidence 34 7999999999999999999999987 432 111 12222222222110 01111100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh--------cCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHH-Hhhhhc
Q 009899 256 KKTAKELDSLIEEWIEEHRRKK--------ESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTII-VGATDT 325 (523)
Q Consensus 256 ~~~~~~l~~~~~~~i~~~~~~~--------~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~Ag~~t 325 (523)
+++++.+.++++.. +...+.-.+.++.+++..++. .+ ++++..+++.++ +||++|
T Consensus 234 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-------~l~~~ei~~~~~~~l~~ag~~t 298 (495)
T 3dsk_A 234 --------RVIEEPLIHTFSLPPALVKSDYQRLYEFFLESAGEILVEADKL-------GISREEATHNLLFATCFNTWGG 298 (495)
T ss_dssp --------HHHHHHHHSSSCCCGGGGHHHHHHHHHHHHHHCHHHHHHHHHT-------TCCHHHHHHHHHHHHHTTHHHH
T ss_pred --------HHHHHHHHHhhcccchhhhhhHHHHHHHHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHHhhhh
Confidence 01111111110000 000000012334455544332 34 677877666555 999999
Q ss_pred hHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhCCC-CCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccc---
Q 009899 326 TTVNLTWALSLLLN-NRRELEKVKKELDSVVGKE-RLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTV--- 400 (523)
Q Consensus 326 t~~~l~~~l~~L~~-~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i--- 400 (523)
|+.+++|++++|+. ||++|++|++|++++++.+ +.++.+++++||||+|||+||||++|+++.. .|.+.+|+++
T Consensus 299 t~~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~r~a~~d~~l~~~ 377 (495)
T 3dsk_A 299 MKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQ-YGRAKKDLVIESH 377 (495)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEEECS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCcccc-ceeecCCeEeccC
Confidence 99999999999995 9999999999999988653 6789999999999999999999999999987 6789999999
Q ss_pred -cceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCC----CCCcccccccCCCCCCCccHHHHHHHHHHH
Q 009899 401 -AEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDV----KGQHFELLPFGGGRRACPGISFALQMSHLA 475 (523)
Q Consensus 401 -~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~ 475 (523)
+||.||||+.|+++.+++|+||++|+||++|+|+||+++++.... -+.-..+++||+|+|.|+|++||.+|++++
T Consensus 378 ~~g~~IpkG~~v~~~~~~~~~dp~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~ 457 (495)
T 3dsk_A 378 DAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLF 457 (495)
T ss_dssp SCEEEECTTCEEEEEHHHHHTCTTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHH
T ss_pred CCceEECCCCEEEeccHHhhCCcccCCCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHH
Confidence 599999999999999999999999999999999999975321000 001113455556669999999999999999
Q ss_pred HHHHHhhcceecCCC
Q 009899 476 LAAFLHAFDISTPGE 490 (523)
Q Consensus 476 ~~~ll~~~~~~~~~~ 490 (523)
++.|+++|++...++
T Consensus 458 l~~ll~~f~~~~~~~ 472 (495)
T 3dsk_A 458 VIEIFRRYDSFDIEV 472 (495)
T ss_dssp HHHHHHHEEEEEEEE
T ss_pred HHHHHHHCceEeCCC
Confidence 999999999876553
No 56
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00 E-value=1.1e-59 Score=458.78 Aligned_cols=395 Identities=15% Similarity=0.108 Sum_probs=302.6
Q ss_pred CCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEE--------ecCeeEEEecCHHHHHHHHHhcccccCCC
Q 009899 35 KKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIR--------IGVHPALVVSSWEMAKELFTKHDVDISSR 106 (523)
Q Consensus 35 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~--------~~~~~~v~v~dp~~~~~il~~~~~~~~~~ 106 (523)
...|++|.++++++...... .+++..+.++ ++||||+++. +|+.++++|++|+++++|++++ ..|+++
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~--~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~ 92 (433)
T 3ivy_A 17 VPSPNLPPGFDFTDPAIYAE--RLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSY 92 (433)
T ss_dssp ---CCCCTTCCTTCHHHHTT--CCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEEST
T ss_pred cCCCCCCCCCCCCCHHHhhc--CCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCC
Confidence 34567777777776654433 5688999999 7899999998 4557899999999999999765 456666
Q ss_pred CCccccc--------cccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccc
Q 009899 107 PKLTVGK--------LLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESD 178 (523)
Q Consensus 107 ~~~~~~~--------~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 178 (523)
+...... .....+ ..++..+|+.|+++|+++. +.|++++++.+.+.+.+.++.+++.+... +
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------~ 162 (433)
T 3ivy_A 93 ENGVIPRFKNDIAREDIEVQR-FVMLNMDAPHHTRLRKIIS-RGFTPRAVGRLHDELQERAQKIAAEAAAA--------G 162 (433)
T ss_dssp TTCSCCCCCTTCCHHHHHGGG-GSGGGCCTTHHHHHHHHHG-GGSCHHHHHTTHHHHHHHHHHHHHHHHHH--------C
T ss_pred ccccccccccccccccccccc-CCccccChHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhhC--------C
Confidence 5433221 111112 2345678999999999997 89999999999999999999999998753 3
Q ss_pred cccchHHHHH-HHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHH
Q 009899 179 QILLEMKKWF-GDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKK 257 (523)
Q Consensus 179 ~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~ 257 (523)
++|+...+ ..+++++++.+ ||.+. ++. ..+......+.. ...|.+.. .+..+
T Consensus 163 --~~d~~~~~~~~~~~~vi~~l-~G~~~------~~~---~~~~~~~~~~~~--------~~~p~~~~-------~~~~~ 215 (433)
T 3ivy_A 163 --SGDFVEQVSCELPLQAIAGL-LGVPQ------EDR---GKLFHWSNEMTG--------NEDPEYAH-------IDPKA 215 (433)
T ss_dssp --EEEHHHHTTSHHHHHHHHHH-HTCCH------HHH---HHHHHHHTTCSC--------CCCGGGTT-------CCHHH
T ss_pred --CeeHHHHHHHHHHHHHHHHH-cCCCH------HHH---HHHHHHHHHHhc--------cCCchhhh-------HHHHH
Confidence 68998887 99999999996 88654 221 234433332211 11221111 13446
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHH
Q 009899 258 TAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSL 336 (523)
Q Consensus 258 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~ 336 (523)
+.+.+.+++.+.++++++. ...|+++.|++...+ +..+ ++++.+++..+++||+|||+.+++|++++
T Consensus 216 ~~~~~~~~~~~~i~~r~~~------~~~dll~~ll~~~~~------~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~ 283 (433)
T 3ivy_A 216 SSAELIGYAMKMAEEKAKN------PADDIVTQLIQADID------GEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMA 283 (433)
T ss_dssp HHHHHHHHHHHHHHHC-------------CHHHHHSCC--------CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcC------CCCcHHHHHHhhhcC------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 6777888888888877643 345899999976432 2245 88999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEccc
Q 009899 337 LLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLW 416 (523)
Q Consensus 337 L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~ 416 (523)
|++||++|++|++|++ +|||+|+||++|+++. ++|.+++|++++||.||+|+.|.++.+
T Consensus 284 L~~~P~~~~~l~~E~~--------------------~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~ 342 (433)
T 3ivy_A 284 FAEHPDQWELYKKVRP--------------------ETAADEIVRWATPVTA-FQRTALRDYELSGVQIKKGQRVVMFYR 342 (433)
T ss_dssp HHHCHHHHHHHHHHCC--------------------TTHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHH
T ss_pred HHHCHHHHHHHHhCcc--------------------cchhHHHhhhCcchhc-eeeEECCCEEECCEEECCCCEEEEChh
Confidence 9999999999999985 5799999999999997 499999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccccC-CCCCCCccHHHHHHHHHHHHHHHHhhcc-eecCCCcccc
Q 009899 417 KLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFG-GGRRACPGISFALQMSHLALAAFLHAFD-ISTPGEAWVD 494 (523)
Q Consensus 417 ~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg-~G~r~C~G~~~A~~~~~~~~~~ll~~~~-~~~~~~~~~~ 494 (523)
++||||++|+||++|+|+||.. .++||| .|+|.|+|++||++|++++++.|+++|+ +++.+++.
T Consensus 343 ~~~rdp~~f~dp~~F~p~R~~~------------~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~-- 408 (433)
T 3ivy_A 343 SANFDEEVFQDPFTFNILRNPN------------PHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPE-- 408 (433)
T ss_dssp HHTTCTTTSSSTTSCCTTCCSC------------CCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCCE--
T ss_pred hhcCCchhCCCcCccCCCCCCC------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCCc--
Confidence 9999999999999999999932 479999 9999999999999999999999999999 99876532
Q ss_pred cCcCCCcccccCCCceEEeeccCCC
Q 009899 495 MTGTAGLTNIRATPLEILLKPRLPS 519 (523)
Q Consensus 495 ~~~~~~~~~~~~~~~~v~~~~r~~~ 519 (523)
.. .+........++|++++|.+.
T Consensus 409 ~~--~~~~~~g~~~lpv~~~~R~~~ 431 (433)
T 3ivy_A 409 RL--RSGWLNGIKHWQVDYTGRCPV 431 (433)
T ss_dssp EC--CCSSBCCEEECEEESCC----
T ss_pred ee--ccCcccCcceeEEEEeccccC
Confidence 11 222334456899999999764
No 57
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00 E-value=2.4e-58 Score=446.25 Aligned_cols=390 Identities=16% Similarity=0.187 Sum_probs=301.6
Q ss_pred CCCCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEe-cCeeEEEecCHHHHHHHHHhcccccCCCCCcccc-
Q 009899 35 KKPPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRI-GVHPALVVSSWEMAKELFTKHDVDISSRPKLTVG- 112 (523)
Q Consensus 35 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~-~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~- 112 (523)
....+||.. |+- ..+. .+++..+.+++ +||||+++++ |+.++++|+||+++++|+.++ .|++++.....
T Consensus 6 ~~~~~g~~~-~~~---~~~~--~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~ 76 (413)
T 2z36_A 6 ADELAGLEL-PVE---RGCP--FAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFP 76 (413)
T ss_dssp ----CCCEE-CCC---CCBT--TBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCC
T ss_pred HHHhccccC-CCC---cccc--cCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcc
Confidence 345566662 431 2344 67788999997 7899999998 889999999999999999874 36655432111
Q ss_pred ------cccc--CCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchH
Q 009899 113 ------KLLG--HNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEM 184 (523)
Q Consensus 113 ------~~~~--~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl 184 (523)
.... .++.+.++..+|+.|+++|+++. +.|++++++.+.+.+.+.++.+++.+.+ . . ++ ++|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~-~--~~-~~d~ 147 (413)
T 2z36_A 77 LFTLDAATLQQLRSQPPLMLGMDGAEHSAARRPVI-GEFTVKRLAALRPRIQDIVDHFIDDMLA----T-D--QR-PVDL 147 (413)
T ss_dssp CSSCCHHHHHHHTTSCCCGGGCCHHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTT----C-S--CS-SEEH
T ss_pred ccccccccccccccccccccccCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHH----h-c--CC-CccH
Confidence 1110 01223134567999999999998 7899999999999999999999998853 1 1 33 7898
Q ss_pred HHHHH-HHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHH
Q 009899 185 KKWFG-DLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELD 263 (523)
Q Consensus 185 ~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~ 263 (523)
...+. .+++++++.+ ||.+. .+. ..+......++.. .. .++..++.+.+.
T Consensus 148 ~~~~~~~~~~~vi~~~-~G~~~------~~~---~~~~~~~~~~~~~--------~~-----------~~~~~~~~~~~~ 198 (413)
T 2z36_A 148 VQALSLPVPSLVICEL-LGVPY------TDH---DFFQSRTTMMVSR--------TS-----------MEDRRRAFAELR 198 (413)
T ss_dssp HHHTTTHHHHHHHHHH-HTCCG------GGH---HHHHHHHHHTTCS--------SC-----------HHHHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHH-hCCCH------HHH---HHHHHHHHHHhcc--------cC-----------cHHHHHHHHHHH
Confidence 86664 6999999984 89876 222 2344433332110 00 045566778888
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHH
Q 009899 264 SLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRR 342 (523)
Q Consensus 264 ~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~ 342 (523)
+++.+.++++++. ...|+++.|++...++ ..+ ++++.+++..+++||+|||+.+++|++++|++||+
T Consensus 199 ~~~~~~i~~r~~~------~~~dll~~ll~~~~~~------~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~ 266 (413)
T 2z36_A 199 AYIDDLITRKESE------PGDDLFSRQIARQRQE------GTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPE 266 (413)
T ss_dssp HHHHHHHHHHHSS------CCSSHHHHHHHHHHHH------SCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHhC------CCCCHHHHHHHhhcCC------CCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHH
Confidence 8999999887753 3458999999864322 234 88899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCC
Q 009899 343 ELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDP 422 (523)
Q Consensus 343 ~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~ 422 (523)
+|++|++|++ |++|||+|+||++|+++..++|.+++|++++||.||+|+.|.++.+++||||
T Consensus 267 ~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp 328 (413)
T 2z36_A 267 QLTVVKANPG------------------RTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDP 328 (413)
T ss_dssp HHHHHHHCGG------------------GHHHHHHHHHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCT
T ss_pred HHHHHHhChH------------------HHHHHHHHHHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCCh
Confidence 9999999964 7999999999999999966699999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCC-cccccCcCCC
Q 009899 423 RVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGE-AWVDMTGTAG 500 (523)
Q Consensus 423 ~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~-~~~~~~~~~~ 500 (523)
++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++ .++.+. .+
T Consensus 329 ~~~~dP~~F~PeR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~--~~ 394 (413)
T 2z36_A 329 AVFKDPAVLDVERGA------------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPMEDVPFK--GD 394 (413)
T ss_dssp TTSSSTTSCCTTCCC------------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBC--TT
T ss_pred hhCCCccccCCCCCC------------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCCcccceec--cc
Confidence 999999999999983 1379999999999999999999999999999999 5898775 223333 33
Q ss_pred cccccCCCceEEeec
Q 009899 501 LTNIRATPLEILLKP 515 (523)
Q Consensus 501 ~~~~~~~~~~v~~~~ 515 (523)
.+.+....++|++.-
T Consensus 395 ~~~~g~~~lpv~~~~ 409 (413)
T 2z36_A 395 SVIYGVHELPVTWHH 409 (413)
T ss_dssp SSSCCBSCCEEECCC
T ss_pred ccccCcceeeEEeec
Confidence 344556777777653
No 58
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00 E-value=1.8e-59 Score=465.69 Aligned_cols=406 Identities=13% Similarity=0.116 Sum_probs=290.7
Q ss_pred cCCCCCCCCCCCCCccccccccccC---CC-CchHHHHHHHHhhCC-eEEEEecC-------eeEEEecCHHHHHHHHHh
Q 009899 31 SNTGKKPPEAAGKWPMIGHLHLLAG---PQ-LPHLALGALADKYGP-LFSIRIGV-------HPALVVSSWEMAKELFTK 98 (523)
Q Consensus 31 ~~~~~~~~pgp~~~p~~G~~~~~~~---~~-~~~~~~~~~~~kyG~-v~~i~~~~-------~~~v~v~dp~~~~~il~~ 98 (523)
...|.+.+|||.++|++|+++.+.. .. +++.++.++++|||+ ||++++++ ...+++++.+..+.++..
T Consensus 4 ~~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~ 83 (473)
T 3dan_A 4 SSKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDV 83 (473)
T ss_dssp GGSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCT
T ss_pred CCCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCC
Confidence 3467889999999999999987531 14 778899999999999 99999863 344555666555444431
Q ss_pred ----cccccCCCCCccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcc
Q 009899 99 ----HDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKK 174 (523)
Q Consensus 99 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 174 (523)
+...+........ ...+......++..+|+.|+++|+++. +.|+. .++.+.+.+.+.++++++.|... ..
T Consensus 84 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~h~~~R~~~~-~~f~~-~~~~~~~~i~~~~~~ll~~~~~~---~~ 157 (473)
T 3dan_A 84 SKVEKKDLFTGTYMPST-KLTGGYRVLSYLDPSEPRHAQLKNLLF-FMLKN-SSNRVIPQFETTYTELFEGLEAE---LA 157 (473)
T ss_dssp TTEECSSCTTSSSCCCG-GGGTTSCCGGGCCTTSHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHH---HH
T ss_pred cceeccccccccccCCc-cccCCCcceeeeCCCcHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHH---hc
Confidence 1111111111111 223322223345678999999999998 78888 48999999999999999999764 22
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHH
Q 009899 175 NESDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKA 254 (523)
Q Consensus 175 ~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~ 254 (523)
. ++ ++|+.+++..+++++++.++||.++ +.. ...+ .+......+... ...|++... .......
T Consensus 158 ~--~~-~vdl~~~~~~~~~~~i~~~~~G~~~-~~~--~~~~---~~~~~~~~~~~~-------~~~p~~~~~-lp~~~~~ 220 (473)
T 3dan_A 158 K--NG-KAAFNDVGEQAAFRFLGRAYFNSNP-EET--KLGT---SAPTLISSWVLF-------NLAPTLDLG-LPWFLQE 220 (473)
T ss_dssp H--HS-CEECHHHHHHHHHHHHHHHHHSCCG-GGS--TTTT---CHHHHHHHHHHH-------HHGGGCCCS-CCHHHHH
T ss_pred c--CC-cccHHHHHHHHHHHHHHHHHcCCCC-Cch--hhhh---hHHHHHHHHHHH-------hccchhhhc-chHHHHH
Confidence 2 33 7999999999999999999999988 431 1111 122222221110 011221100 0000000
Q ss_pred H------------HHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHH-H
Q 009899 255 M------------KKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTII-V 320 (523)
Q Consensus 255 ~------------~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~ 320 (523)
. .+..+.+.+++ .|+++.+++..++. .+ ++++..+++.++ +
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~ll~~~~~~-------~l~~~ei~~~~l~~~g~ 275 (473)
T 3dan_A 221 PLLHTFRLPAFLIKSTYNKLYDYF------------------QSVATPVMEQAEKL-------GVPKDEAVHNILFAVCF 275 (473)
T ss_dssp HHHSSSCCCGGGTHHHHHHHHHHH------------------HHHCHHHHHHHHHH-------TCCHHHHHHHHHHHHHT
T ss_pred HHhhhccchHhhhhhchhhhHHHH------------------HHHHHHHHHhHhhc-------CCCHHHHHHHHHHHHHH
Confidence 0 11111111111 14455566544332 34 677887776666 8
Q ss_pred hhhhchHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhCC--CCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeeccc
Q 009899 321 GATDTTTVNLTWALSLLLN-NRRELEKVKKELDSVVGK--ERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTED 397 (523)
Q Consensus 321 Ag~~tt~~~l~~~l~~L~~-~p~~~~~l~~Ei~~~~~~--~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~ 397 (523)
||++||+.+++|++++|++ ||++|++||+|++++++. ++.++.+++++||||+|||+|+||++|+++.. .|.+++|
T Consensus 276 ~~~~tta~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d 354 (473)
T 3dan_A 276 NTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQ-YGKAKSN 354 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEE-EEEESSC
T ss_pred hccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCcccc-cccccCC
Confidence 8899999999999999999 799999999999998764 36789999999999999999999999999986 5779999
Q ss_pred ccc----cceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccc---------cCCCCCCCcc
Q 009899 398 CTV----AEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLP---------FGGGRRACPG 464 (523)
Q Consensus 398 ~~i----~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~---------Fg~G~r~C~G 464 (523)
+++ +||.||+|+.|.++.+++||||++|+||++|||+||++... ....+++ ||+|+|.|+|
T Consensus 355 ~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~~~dp~~F~p~R~~~~~~------~~~~~~~fg~G~~~~~Fg~G~~~C~G 428 (473)
T 3dan_A 355 FTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGE------ALLKYVWWSNGPETESPTVENKQCAG 428 (473)
T ss_dssp EEEECSSCEEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTTTSGGGG------GGGGGCCTTSSCTTSCCCTTSCSCTT
T ss_pred cEeecCCCceEeCCCCEEEechHHhhCCchhcCCcccCCccccCCCcc------cccccceecCCcCcCCCCCCCCCCCc
Confidence 999 99999999999999999999999999999999999997621 2233444 5555599999
Q ss_pred HHHHHHHHHHHHHHHHhhcceecCCCc
Q 009899 465 ISFALQMSHLALAAFLHAFDISTPGEA 491 (523)
Q Consensus 465 ~~~A~~~~~~~~~~ll~~~~~~~~~~~ 491 (523)
++||.+|++++++.|+++|++...++.
T Consensus 429 ~~lA~~e~~~~l~~ll~~f~~~~~~~~ 455 (473)
T 3dan_A 429 KDFVVLITRLFVIELFRRYDSFEIELG 455 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEccCC
Confidence 999999999999999999997655543
No 59
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00 E-value=5.9e-59 Score=452.67 Aligned_cols=379 Identities=17% Similarity=0.142 Sum_probs=299.5
Q ss_pred CCchHHHHHHHHhhC-CeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccccccCCCcceeeCCCChhHHHHH
Q 009899 57 QLPHLALGALADKYG-PLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMR 135 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG-~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 135 (523)
.+++.++.++++++| ||+++..++ +.++|+||+++++|+++. ..|++++...........+ ..++..+|+.|+++|
T Consensus 38 ~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~-~~~~~~dg~~h~~~R 114 (421)
T 3lxh_A 38 QGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRSP-ERFSSRVIWVPREAGEAYD-MVPTKLDPPEHTPYR 114 (421)
T ss_dssp GCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEETTCCSSSHHHHHHCC-CTTTTCCTTTHHHHH
T ss_pred cChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcCh-hhccCCcccCCcccccccc-cCCccCCcHHHHHHH
Confidence 578889998887766 899998766 589999999999999554 4576665322211111111 234566899999999
Q ss_pred HhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhcccccCcccccch
Q 009899 136 KITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYFGARAENDE 214 (523)
Q Consensus 136 ~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~ 214 (523)
+++. +.|++++++.+.+.+.+.++.+++.+... + .+|+...+ ..++.++++. +||.+. ++.
T Consensus 115 ~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------~--~~d~~~~~~~~~~~~v~~~-~~G~~~------~~~ 176 (421)
T 3lxh_A 115 KAID-KGLNLAEIRKLEDQIRTIAVEIIEGFADR--------G--HCEFGSEFSTVFPVRVFLA-LAGLPV------EDA 176 (421)
T ss_dssp HHHH-HHHSHHHHHTTHHHHHHHHHHHHHTTTTT--------S--EEEHHHHTTTTHHHHHHHH-HHTCCG------GGH
T ss_pred HHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHhhc--------C--CeehHHHHHHHHHHHHHHH-HcCCCH------HHH
Confidence 9998 89999999999999999999998887432 3 57876555 5677777765 588765 222
Q ss_pred HHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHH
Q 009899 215 TEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSV 294 (523)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~ 294 (523)
..+......++.... .+| ....++..++.+.+.+++.+.++++++. ...|+++.|++.
T Consensus 177 ---~~~~~~~~~~~~~~~------~~p-------~~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~dll~~ll~~ 234 (421)
T 3lxh_A 177 ---TKLGLLANEMTRPSG------NTP-------EEQGRSLEAANKGFFEYVAPIIAARRGG------SGTDLITRILNV 234 (421)
T ss_dssp ---HHHHHHHHHHHSCCC------SSH-------HHHHHHHHHHHHHHHHHHHHHHHHHTTC------CCCSHHHHHHTS
T ss_pred ---HHHHHHHHHHhcccc------CCC-------chhHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCHHHHHHhh
Confidence 355555555543211 112 1124667778888999999999888764 446899999976
Q ss_pred hhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHH
Q 009899 295 LEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQ 373 (523)
Q Consensus 295 ~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~ 373 (523)
..+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++ |++
T Consensus 235 ~~~------~~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~ 290 (421)
T 3lxh_A 235 EID------GKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL------------------KLQ 290 (421)
T ss_dssp CBT------TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH------------------HHH
T ss_pred hcc------CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHH
Confidence 432 2245 889999999999999999999999999999999999999999987 899
Q ss_pred HHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCccccc
Q 009899 374 AVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELL 453 (523)
Q Consensus 374 a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~ 453 (523)
|||+|+||++|++ . ++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+|||| +..++
T Consensus 291 a~i~E~lRl~p~~-~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~------------~~~~l 356 (421)
T 3lxh_A 291 RGVEELFRRFAVV-S-DARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRR------------DVTHS 356 (421)
T ss_dssp HHHHHHHHHCCCB-E-EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS------------CCCCC
T ss_pred HHHHHHHHhcCcc-C-CceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCC------------CCCCC
Confidence 9999999999999 4 59999999999999999999999999999999999999999999995 23589
Q ss_pred ccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEeeccCCC
Q 009899 454 PFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLKPRLPS 519 (523)
Q Consensus 454 ~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~ 519 (523)
|||.|+|.|+|++||++|++++++.|+++| ++++.++.+..+. .+.+ .....++|+++||.++
T Consensus 357 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~~~~~~--~~~~-~~~~~lpv~~~p~~~~ 420 (421)
T 3lxh_A 357 TFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAVPIYH--SGIV-AAVENIPLEWEPQRVS 420 (421)
T ss_dssp TTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCCEECTTCCCEEE--CSSB-CEEECCEEECCCC---
T ss_pred CCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCcEECCCCCceec--cccc-cCceeeeEEEeccccC
Confidence 999999999999999999999999999999 9999876433332 2333 3456799999998753
No 60
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=7.3e-59 Score=455.00 Aligned_cols=384 Identities=18% Similarity=0.175 Sum_probs=299.8
Q ss_pred chHHHHHHHHhhCCeE--EEE-ecCeeEEEecCHHHHHHHHHhcccccCCCCCccccccc-----------cC-CCccee
Q 009899 59 PHLALGALADKYGPLF--SIR-IGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLL-----------GH-NYANFG 123 (523)
Q Consensus 59 ~~~~~~~~~~kyG~v~--~i~-~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~ 123 (523)
++..+.++ ++||||+ +++ .++.++++|++++++++|++++ ..|++++........ +. .....+
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 67788888 6789999 888 7788999999999999999776 557776653321110 00 011235
Q ss_pred eCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhc
Q 009899 124 FSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAG 202 (523)
Q Consensus 124 ~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG 202 (523)
+..+|+.|+++|+++. +.|++++++.+++.+.+.++++++.+.+. ++ ++|+...+ ..+++++|+.+ ||
T Consensus 125 ~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------~~-~~dl~~~~~~~~~~~vi~~l-~G 193 (450)
T 3tkt_A 125 VQMDAPKHPKLRRLTQ-DWFMPKNLARLDGEIRKIANEAIDRMLGA--------GE-EGDFMALVAAPYPLHVVMQI-LG 193 (450)
T ss_dssp GGCCTTHHHHHHHHHH-TTTSHHHHGGGHHHHHHHHHHHHHHHHHT--------CS-EEEHHHHTTTHHHHHHHHHH-TT
T ss_pred ccCCCHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CEeeHHHHHHHHHHHHHHHH-cC
Confidence 6678999999999998 89999999999999999999999999763 34 79998888 69999999985 88
Q ss_pred ccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccc-cccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 009899 203 KRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWL-DIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGA 281 (523)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~-~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~ 281 (523)
.+. ++. ..+......++..... ...++..++ ......++..++.+.+.+++.+.++++++.
T Consensus 194 ~~~------~~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~----- 255 (450)
T 3tkt_A 194 VPP------EDE---PKMLFLTQQMFGGQDE----DMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRN----- 255 (450)
T ss_dssp CCG------GGH---HHHHHHHHTTSCCC--------------------HHHHHHHHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCh------hHH---HHHHHHHHHHhccccc----hhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC-----
Confidence 765 332 3555555554332111 122222221 112234667778888999999999988764
Q ss_pred CCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCC
Q 009899 282 NLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERL 360 (523)
Q Consensus 282 ~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~ 360 (523)
..+|+++.|++...+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 256 -~~~dll~~ll~~~~~------~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~-------- 320 (450)
T 3tkt_A 256 -PTDDVATVIANAVVD------GEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRN-------- 320 (450)
T ss_dssp -CCSSHHHHHHTCEET------TEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------
T ss_pred -CCCCHHHHHHhcccc------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCHH--------
Confidence 345899999876432 2245 889999999999999999999999999999999999999999974
Q ss_pred CChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCC
Q 009899 361 LCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAH 440 (523)
Q Consensus 361 ~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~ 440 (523)
|++|||+|+||++|+++. ++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||-
T Consensus 321 ----------~l~a~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~--- 386 (450)
T 3tkt_A 321 ----------LLPGIVEEAIRWTTPVQH-FMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA--- 386 (450)
T ss_dssp ----------GHHHHHHHHHHHHCSBCE-EEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT---
T ss_pred ----------HHHHHHHHHHHhCCCccC-cceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC---
Confidence 899999999999999994 699999999999999999999999999999999999999999999952
Q ss_pred CCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcc-eecCCCcccccCcCCCcccccCCCceEEeec
Q 009899 441 KDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFD-ISTPGEAWVDMTGTAGLTNIRATPLEILLKP 515 (523)
Q Consensus 441 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 515 (523)
..++|||.|+|.|+|++||++|++++++.|+++|+ +++.++. .+. .+........++|+++|
T Consensus 387 ---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~--~~~~~~g~~~lpv~~~~ 449 (450)
T 3tkt_A 387 ---------NRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAGEP--KRV--NSTFVGGFKSLPMRWKA 449 (450)
T ss_dssp ---------TCSSTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESSCC--EEC--CCSSBCCEEECEEEEEE
T ss_pred ---------CCCCCCCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCCCc--ccc--cCcccCCcccceEEEec
Confidence 23799999999999999999999999999999998 6776432 222 22233445678888875
No 61
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00 E-value=2.5e-59 Score=456.68 Aligned_cols=385 Identities=16% Similarity=0.174 Sum_probs=289.8
Q ss_pred CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccccccCCCcceeeCCCChhHHHHHH
Q 009899 57 QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRK 136 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 136 (523)
.+++.++.++ ++||||+++..++ .++|++|+++++|+.++.. |++++......... +.+.++..+|+.|+++|+
T Consensus 53 ~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~~~~--~~~~l~~~dg~~h~~~Rr 126 (441)
T 3nc3_A 53 NNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAEPVM--RGPVLAQMHGKEHSAKRR 126 (441)
T ss_dssp HCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCCCSC--C-------------CCHH
T ss_pred cChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCccc-cccccccccccccc--CCCccccCCcHHHHHHHH
Confidence 5667777776 6899999987655 8999999999999987754 76665433322111 112356668999999999
Q ss_pred hHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHH-HHHHHHHHHHHHHHHhcccccCcccccchH
Q 009899 137 ITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMK-KWFGDLNLNVILMMIAGKRYFGARAENDET 215 (523)
Q Consensus 137 ~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~-~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~ 215 (523)
++. +.|++++++.+++.+.+.++++++.+.+ +. .+|+. ++...+++++++. +||.+. ++.+
T Consensus 127 ~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---------~~-~~dl~~~~~~~~~~~vi~~-l~G~~~------~~~~ 188 (441)
T 3nc3_A 127 IVV-RSFIGDALDHLSPLIKQNAENLLAPYLE---------RG-KSDLVNDFGKTFAVCVTMD-MLGLDK------RDHE 188 (441)
T ss_dssp HHH-HHHHHTHHHHHHHHHHHHHHHHHTTTTT---------TT-EEECCCCCHHHHHHHHHHH-HTTCCG------GGHH
T ss_pred HHH-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---------cC-CCcHHHHHHHHHHHHHHHH-HcCCCH------HHHH
Confidence 997 8999999999999999999999887743 22 57864 4456699999998 588776 3332
Q ss_pred HHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHh
Q 009899 216 EVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVL 295 (523)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~ 295 (523)
.+......+........ . .....+...++.+.+.+++.+.|+++++. ...|+++.|++..
T Consensus 189 ---~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~~l~~~~~~~i~~rr~~------~~~Dll~~Ll~~~ 248 (441)
T 3nc3_A 189 ---KISEWHSGVADFITSIS----Q-------SPEARAHSLWCSEQLSQYLMPVIKERRVN------PGSDLISILCTSE 248 (441)
T ss_dssp ---HHHHHHHHHHHHHHCSC----C-------CHHHHHHHHHHHHHHHHHHHHHHHHHTTS------CCSSHHHHHCC--
T ss_pred ---HHHHHHHHHHHhccccc----C-------ChHHHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCHHHHHHHhh
Confidence 44444444433211100 0 01123556677888899999999887653 4468999998764
Q ss_pred hhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHH
Q 009899 296 EGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQA 374 (523)
Q Consensus 296 ~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a 374 (523)
.+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|+ +|++|
T Consensus 249 ~~------~~~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a 304 (441)
T 3nc3_A 249 YE------GMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR------------------SLVPR 304 (441)
T ss_dssp ----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG------------------GGHHH
T ss_pred cc------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHH
Confidence 32 2245 88999999999999999999999999999999999999999986 49999
Q ss_pred HHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccc
Q 009899 375 VIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLP 454 (523)
Q Consensus 375 ~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~ 454 (523)
||+|+||++|+++. ++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||+..... ....+..++|
T Consensus 305 ~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~--~~~~~~~~l~ 381 (441)
T 3nc3_A 305 AIAETLRYKPPVQL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKS--AFSGAARHLA 381 (441)
T ss_dssp HHHHHHHHSCSBCE-EEEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGG--TTSSSCSSCT
T ss_pred HHHHhhhcCCcccC-ccEEECCCEEECCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCccccc--ccCCCCCccc
Confidence 99999999999998 59999999999999999999999999999999999999999999999765421 1112567999
Q ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEeec
Q 009899 455 FGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLKP 515 (523)
Q Consensus 455 Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 515 (523)
||.|+|.|+|++||++|++++++.|+++| ++++.+++ +. ...+.+.+....++|+++|
T Consensus 382 FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-~~--~~~~~~~~~~~~lpv~~~~ 440 (441)
T 3nc3_A 382 FGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEEDF-CY--AESGLYTRGPVSLLVAFDG 440 (441)
T ss_dssp TCCGGGCCTTHHHHHHHHHHHHHHHHHHSTTCEECTTC-CC--CEECSSBCEESCCEEECC-
T ss_pred CCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCCC-cc--cccCccccCcceeEEEEec
Confidence 99999999999999999999999999999 99998653 22 2234455667889998874
No 62
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00 E-value=5e-58 Score=441.33 Aligned_cols=366 Identities=15% Similarity=0.151 Sum_probs=296.1
Q ss_pred CCchHHHHHHHHhhCCeEEEEecC----eeEEEecCHHHHHHHHHhcccccCCCCCccccccccCCCcceeeCCCChhHH
Q 009899 57 QLPHLALGALADKYGPLFSIRIGV----HPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWR 132 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~----~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~ 132 (523)
.+++..+.++ ++||||++++.++ .++++|+||+++++|+++. ..|++++.......... ..+.++..+|+.|+
T Consensus 12 ~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~-~~~~~~~~~g~~~~ 88 (384)
T 3oo3_A 12 LDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILADH-ERFSSMRPVDDEADRAL-LPGILQAYDPPDHT 88 (384)
T ss_dssp TEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHHCT-TTEECSCCCC-----CC-CTTCGGGCCTTHHH
T ss_pred cChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHhCc-hhccCCccccccccccc-cccccccCCChhHH
Confidence 7788999999 5999999999876 8999999999999999544 56777765432221111 12345667899999
Q ss_pred HHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHHHHHHHHHhcccccCccccc
Q 009899 133 EMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAEN 212 (523)
Q Consensus 133 ~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~ 212 (523)
++|+.+. +.|+.++++.+.+.+.+.++.+++.+.+. ++ ++|+...+...+.+.+...+||.+. +
T Consensus 89 ~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------~~-~~d~~~~~~~~~~~~v~~~~~G~~~------~ 152 (384)
T 3oo3_A 89 RLRRTVA-PAYSARRMERLRPRIEEIVEECLDDFESV--------GA-PVDFVRHAAWPIPAYIACEFLGVPR------D 152 (384)
T ss_dssp HHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHS--------CS-SEEHHHHTTTHHHHHHHHHHHTCCG------G
T ss_pred HHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CccHHHHHHHHHHHHHHHHHcCCCH------H
Confidence 9999998 89999999999999999999999998653 55 7999999998888888888999876 2
Q ss_pred chHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHH
Q 009899 213 DETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLL 292 (523)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll 292 (523)
+. ..+...+..++. ....++..++.+.+.+++.+.++++++. ...|+++.|+
T Consensus 153 ~~---~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~d~l~~ll 204 (384)
T 3oo3_A 153 DQ---AELSRMIRESRE-------------------SRLPRQRTLSGLGIVNYTKRLTSGKRRD------PGDGMIGVIV 204 (384)
T ss_dssp GH---HHHHHHHHHHHH-------------------CSCHHHHHHHHHHHHHHHHHHHHHHHHS------CCSSHHHHHH
T ss_pred HH---HHHHHHHHHHhc-------------------cCChHHHHHHHHHHHHHHHHHHHHHHhC------CCCCHHHHHH
Confidence 32 245555554433 0123556677888899999999887653 4469999999
Q ss_pred HHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChh
Q 009899 293 SVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLVY 371 (523)
Q Consensus 293 ~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~ 371 (523)
+.. . ..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++.
T Consensus 205 ~~~-~-------~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~------------------ 258 (384)
T 3oo3_A 205 REH-G-------AEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL------------------ 258 (384)
T ss_dssp HHH-G-------GGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG------------------
T ss_pred Hhc-C-------CCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH------------------
Confidence 862 1 134 7889999999999999999999999999999999999999999874
Q ss_pred HHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCccc
Q 009899 372 LQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFE 451 (523)
Q Consensus 372 l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~ 451 (523)
++|||+|+||++|++|..++|.+++|++++||.||+|+.|.++.+++|| +||++|+||||- ..
T Consensus 259 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~~------------~~ 321 (384)
T 3oo3_A 259 IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR-----APGDRFDITREK------------AT 321 (384)
T ss_dssp HHHHHHHHHHHHCSCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCSC------------CC
T ss_pred HHHHHHHHHHhCCcccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC-----CCcceeCCCCCC------------CC
Confidence 8999999999999999767999999999999999999999999999999 999999999962 34
Q ss_pred ccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcc-cccCcCCCcccccCCCceEEe
Q 009899 452 LLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAW-VDMTGTAGLTNIRATPLEILL 513 (523)
Q Consensus 452 ~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~ 513 (523)
++|||.|+|.|+|++||++|++++++.|+++| ++++.+++. +++.. .+.+..+...++|++
T Consensus 322 ~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~-~~~~~~~~~~lpv~~ 384 (384)
T 3oo3_A 322 HMAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPEEDLRFKP-GRPAPFAVEELPLEW 384 (384)
T ss_dssp CCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCEEC-SSSSCCEESCCEEEC
T ss_pred cCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeCCCCccceeec-ccccccCcceeeeeC
Confidence 89999999999999999999999999999999 999877532 33322 034445566777753
No 63
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00 E-value=3.6e-58 Score=447.70 Aligned_cols=376 Identities=15% Similarity=0.157 Sum_probs=299.7
Q ss_pred CchHHHHHHHHhhCCeEEEEec-------CeeEEEecCHHHHHHHHHhcccccCCCCCc--c-ccccccCCCcceeeCCC
Q 009899 58 LPHLALGALADKYGPLFSIRIG-------VHPALVVSSWEMAKELFTKHDVDISSRPKL--T-VGKLLGHNYANFGFSPY 127 (523)
Q Consensus 58 ~~~~~~~~~~~kyG~v~~i~~~-------~~~~v~v~dp~~~~~il~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~ 127 (523)
+++..+.+++ +|||||+++++ +.++++|+||+++++|+.++ ..|++++.. . ....++..+.+ ++..+
T Consensus 45 ~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~-l~~~d 121 (435)
T 2wm5_A 45 VRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGS-MIVLD 121 (435)
T ss_dssp HHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHG-GGGCC
T ss_pred ChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccc-cccCC
Confidence 4677888885 69999999886 66899999999999999875 357766532 1 11111101223 34457
Q ss_pred ChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhccccc
Q 009899 128 NAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYF 206 (523)
Q Consensus 128 g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~ 206 (523)
|+.|+++|+++. +.|++++++.+.+.+.+.++++++.+.+. . + ++ ++|+...+ ..+++++++.+ ||.++
T Consensus 122 g~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~---~-~--~~-~vd~~~~~~~~~~~~vi~~~-~G~~~- 191 (435)
T 2wm5_A 122 DPRHQRLRSIVS-RAFTPKVVARIEAAVRDRAHRLVSSMIAN---N-P--DR-QADLVSELAGPLPLQIICDM-MGIPK- 191 (435)
T ss_dssp TTHHHHHHHHHH-HTCCHHHHHHHHHHHHHHHHHHHHHHHHH---C-T--TS-EEEHHHHTTTHHHHHHHHHH-HTCCG-
T ss_pred cHHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc---C-C--CC-cEehHHHHHHHHHHHHHHHH-cCCCH-
Confidence 999999999998 89999999999999999999999999764 2 1 34 68999766 78999999999 99987
Q ss_pred CcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 009899 207 GARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLD 286 (523)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d 286 (523)
.+. ..+......++... .|.+. ...++..++.+.+.+++.+.|+++++. ...|
T Consensus 192 -----~~~---~~~~~~~~~~~~~~--------~p~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~d 244 (435)
T 2wm5_A 192 -----ADH---QRIFHWTNVILGFG--------DPDLA-----TDFDEFMQVSADIGAYATALAEDRRVN------HHDD 244 (435)
T ss_dssp -----GGH---HHHHHHHHHHHHTT--------CTTSC-----CCHHHHHHHHHHHHHHHHHHHHHHHHS------CCSS
T ss_pred -----HHH---HHHHHHHHHHhccC--------Ccchh-----hhHHHHHHHHHHHHHHHHHHHHHHhcC------CCCC
Confidence 222 24445554444321 13221 123566778888999999999988763 3468
Q ss_pred HHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhh
Q 009899 287 FIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESD 365 (523)
Q Consensus 287 ~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 365 (523)
+++.|++...+ +..+ ++++..++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 245 ll~~ll~~~~~------~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------- 305 (435)
T 2wm5_A 245 LTSSLVEAEVD------GERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD------------- 305 (435)
T ss_dssp HHHHHHHCCBT------TBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH-------------
T ss_pred HHHHHHhhhcc------CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH-------------
Confidence 99999976332 2245 889999999999999999999999999999999999999999986
Q ss_pred hcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCC
Q 009899 366 IEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDV 445 (523)
Q Consensus 366 ~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~ 445 (523)
+|++|||+|+||++|+++ .++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+|||| +
T Consensus 306 ----~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~--~------ 372 (435)
T 2wm5_A 306 ----GLAPTAVEEIVRWASPVV-YMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN--P------ 372 (435)
T ss_dssp ----HHHHHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC--S------
T ss_pred ----hHHHHHHHHHHhhcCccc-CcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC--C------
Confidence 389999999999999999 569999999999999999999999999999999999999999999994 1
Q ss_pred CCCcccccccCC-CCCCCccHHHHHHHHHHHHHHHHhhcc-eecCCCcccccCcCCCcccccCCCceEEe
Q 009899 446 KGQHFELLPFGG-GRRACPGISFALQMSHLALAAFLHAFD-ISTPGEAWVDMTGTAGLTNIRATPLEILL 513 (523)
Q Consensus 446 ~~~~~~~~~Fg~-G~r~C~G~~~A~~~~~~~~~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 513 (523)
..++|||. |+|.|+|++||++|++++++.|+++|+ +++.++. .+. .+.+......++|++
T Consensus 373 ----~~~lpFG~~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~--~~~~~~~~~~lpv~~ 434 (435)
T 2wm5_A 373 ----NPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATEEP--ARL--LSQFIHGIKTLPVTW 434 (435)
T ss_dssp ----CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC--EEC--CCSSBCCEEECEEEC
T ss_pred ----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCccEECCCc--ccc--ccccccCccceeEEe
Confidence 24799999 999999999999999999999999997 9987632 222 223344556677765
No 64
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00 E-value=1e-58 Score=448.13 Aligned_cols=369 Identities=17% Similarity=0.158 Sum_probs=293.2
Q ss_pred CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccccccCCCcceeeCCCChhHHHHHH
Q 009899 57 QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMRK 136 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 136 (523)
.+++..+.+++++ |||+++..++ +.++|+||+++++|++++ ..|++++........+..+ ..++..+|+.|+++|+
T Consensus 24 ~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~-~~~~~~~g~~h~~~R~ 99 (396)
T 3oft_A 24 QDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQ-FIPLQQDGAEHKAFRT 99 (396)
T ss_dssp TCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHC-CTTTTCCHHHHHHHHH
T ss_pred cChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccc-cCccccCCcHHHHHHH
Confidence 6789999999999 9999998874 589999999999999765 4566665322211111111 2345678999999999
Q ss_pred hHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhcccccCcccccchH
Q 009899 137 ITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYFGARAENDET 215 (523)
Q Consensus 137 ~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~ 215 (523)
++. +.|+.++++.+.+.+.+.++++++.+.+. + .+|+...+ ..++.++++. +||.+. ++.
T Consensus 100 ~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--------~--~~d~~~~~~~~~~~~v~~~-~~G~~~------~~~- 160 (396)
T 3oft_A 100 PVM-KGLASRFVVALEPKVQAVARKLMESLRPR--------G--SCDFVSDFAEILPLNIFLT-LIDVPL------EDR- 160 (396)
T ss_dssp HHH-HHTCHHHHHHHHHHHHHHHHHHHHHHGGG--------S--EEEHHHHTTTTHHHHHHHH-HTTCCG------GGH-
T ss_pred Hhh-hhhCHHHHHHHHHHHHHHHHHHHHHhhhc--------C--CccHHHHHHHHHHHHHHHH-HcCCCH------HHH-
Confidence 998 89999999999999999999999988542 3 57876665 5566666665 678665 222
Q ss_pred HHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHh
Q 009899 216 EVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVL 295 (523)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~ 295 (523)
..+......++.... .++..++.+.+.+++.+.|+++++. ...|+++.|++..
T Consensus 161 --~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~r~~~------~~~d~l~~ll~~~ 213 (396)
T 3oft_A 161 --PRLRQLGVQLTRPDG-------------------SMTVEQLKQAADDYLWPFIEKRMAQ------PGDDLFSRILSEP 213 (396)
T ss_dssp --HHHHHHHHHHHSCCS-------------------SCCHHHHHHHHHHHHHHHHHHHHHS------CCSSHHHHHHTSC
T ss_pred --HHHHHHHHHHhCCCC-------------------HHHHHHHHHHHHHHHHHHHHHHHhC------CCCCHHHHHHHhh
Confidence 345555554432100 1234566778888999999888765 3468999999764
Q ss_pred hhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHH
Q 009899 296 EGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQA 374 (523)
Q Consensus 296 ~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a 374 (523)
.+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++ |++|
T Consensus 214 ~~------~~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a 269 (396)
T 3oft_A 214 VG------GRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD------------------LIPA 269 (396)
T ss_dssp BT------TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHH
T ss_pred cc------CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHH
Confidence 32 2245 889999999999999999999999999999999999999999986 8999
Q ss_pred HHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccc
Q 009899 375 VIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLP 454 (523)
Q Consensus 375 ~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~ 454 (523)
||+|+||++|++ . ++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||+. +..++|
T Consensus 270 ~i~E~lRl~p~~-~-~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~----------~~~~~~ 337 (396)
T 3oft_A 270 AADELMRRYPTV-A-VSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA----------PIRHTT 337 (396)
T ss_dssp HHHHHHHHCCCB-E-EEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC----------GGGSST
T ss_pred HHHHHHHhcCcc-c-CceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC----------CCCccc
Confidence 999999999999 4 5999999999999999999999999999999999999999999999963 346899
Q ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEee
Q 009899 455 FGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLK 514 (523)
Q Consensus 455 Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 514 (523)
||+|+|.|+|++||++|++++++.|+++| ++++.++.++.+. .+.+ .....++|++.
T Consensus 338 FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~~~~~~--~~~~-~~~~~lpv~~~ 395 (396)
T 3oft_A 338 MGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPDKAVTMK--GGNV-GACTALPLVWR 395 (396)
T ss_dssp TCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEECSSSCCEEE--CSSB-CEEEECEEEEC
T ss_pred CCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceECCCCCceec--cccc-cCcccceEEeC
Confidence 99999999999999999999999999999 9999876443332 2222 23455777664
No 65
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00 E-value=2.2e-58 Score=444.64 Aligned_cols=369 Identities=16% Similarity=0.175 Sum_probs=289.1
Q ss_pred CCchHHHHHHHHhhCCeEEEEe-cCeeEEEecCHHHHHHHHHhcccccC-C-CCCc--ccc---ccccCCCcceeeCCCC
Q 009899 57 QLPHLALGALADKYGPLFSIRI-GVHPALVVSSWEMAKELFTKHDVDIS-S-RPKL--TVG---KLLGHNYANFGFSPYN 128 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~-~~~~~v~v~dp~~~~~il~~~~~~~~-~-~~~~--~~~---~~~~~~~~~~~~~~~g 128 (523)
.+++..+.++ ++|||||++++ ++.+.++|+||+++++++.++. |+ + ++.. ... ...+..+.++++.
T Consensus 16 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--- 89 (396)
T 1n40_A 16 DRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDRR--FSMKETAAAGAPRLNALTVPPEVVNNMGNI--- 89 (396)
T ss_dssp SSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EESGGGGSTTCCCSSCCSSCGGGGGHHHHH---
T ss_pred cCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCCC--cccccCccccccccccccCCchhhhhhhhH---
Confidence 6778999999 99999999997 7889999999999999998652 54 3 3321 111 0111011223232
Q ss_pred hhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhcccccC
Q 009899 129 AYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYFG 207 (523)
Q Consensus 129 ~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~ 207 (523)
.|+++|+++. +.|+++ ++.+.+.+.+.++++++.+... ++ ++|+...+ ..+++++++. +||.+.
T Consensus 90 -~h~~~R~~~~-~~fs~~-~~~~~~~i~~~~~~l~~~l~~~--------~~-~~d~~~~~~~~~~~~vi~~-~~G~~~-- 154 (396)
T 1n40_A 90 -ADAGLRKAVM-KAITPK-APGLEQFLRDTANSLLDNLITE--------GA-PADLRNDFADPLATALHCK-VLGIPQ-- 154 (396)
T ss_dssp -HHTTCHHHHH-HHTSSC-STTHHHHHHHHHHHHHHHHHHH--------CS-CEETTTTTHHHHHHHHHHH-HHTCCG--
T ss_pred -HHHHHHHHHH-HhhChH-HHHhHHHHHHHHHHHHHHHHhc--------CC-CccHHHHHHHHhHHHHHHH-HhCCCh--
Confidence 8999999998 789999 9999999999999999998752 33 78998665 5899999998 899876
Q ss_pred cccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccH
Q 009899 208 ARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDF 287 (523)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~ 287 (523)
++. ..+...++.++.... ..| .++..++.+.+ +++.+.|+ +.+ ...|+
T Consensus 155 ----~~~---~~~~~~~~~~~~~~~------~~p----------~~~~~~~~~~~-~~~~~~i~------~~~--~~~dl 202 (396)
T 1n40_A 155 ----EDG---PKLFRSLSIAFMSSA------DPI----------PAAKINWDRDI-EYMAGILE------NPN--ITTGL 202 (396)
T ss_dssp ----GGH---HHHHHTHHHHTBCCS------SCC----------HHHHHHHHHHH-HHHHHHHH------CTT--CCSHH
T ss_pred ----hhH---HHHHHHHHHHhcccc------CCC----------HHHHHHHHHHH-HHHHHHHh------CCC--CCCCH
Confidence 222 245555555433211 011 13455566667 77777776 111 34699
Q ss_pred HHHHHHHhhh-cCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhh
Q 009899 288 IDVLLSVLEG-EGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESD 365 (523)
Q Consensus 288 ~~~ll~~~~~-~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 365 (523)
++.|++...+ + +..+ ++++.+++..+++||+|||+.+++|++++|++||++|+++++|++
T Consensus 203 l~~ll~~~~~~~-----~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------- 264 (396)
T 1n40_A 203 MGELSRLRKDPA-----YSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------- 264 (396)
T ss_dssp HHHHHHHHTSGG-----GTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-------------
T ss_pred HHHHHHhhcccc-----cCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH-------------
Confidence 9999987511 2 1245 889999999999999999999999999999999999999999864
Q ss_pred hcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCC
Q 009899 366 IEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDV 445 (523)
Q Consensus 366 ~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~ 445 (523)
|++|||+|+||++|++|..++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||++
T Consensus 265 -----~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~------- 332 (396)
T 1n40_A 265 -----LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP------- 332 (396)
T ss_dssp -----GHHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST-------
T ss_pred -----HHHHHHHHHHhhCCCcccccceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC-------
Confidence 89999999999999999666999999999999999999999999999999999999999999999963
Q ss_pred CCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEe
Q 009899 446 KGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILL 513 (523)
Q Consensus 446 ~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 513 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++.. ++....+.+.+....++|++
T Consensus 333 ----~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~-~~~~~~~~~~~~~~~lpv~~ 396 (396)
T 1n40_A 333 ----TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPID-QLVWRTRFQRRIPERLPVLW 396 (396)
T ss_dssp ----TCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-GCCBCCSBSBCCBSCCEEEC
T ss_pred ----CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCCcc-ccccccccccCCcceeeeeC
Confidence 2479999999999999999999999999999999 599876521 22233445556677888763
No 66
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00 E-value=1.2e-58 Score=447.16 Aligned_cols=363 Identities=14% Similarity=0.205 Sum_probs=283.4
Q ss_pred HHHHHHhhCCeEEEEec-Ce---eEEEecCHHHHHHHHHhcccccCCCCCc------c-ccccc-cCCCcceeeCCCChh
Q 009899 63 LGALADKYGPLFSIRIG-VH---PALVVSSWEMAKELFTKHDVDISSRPKL------T-VGKLL-GHNYANFGFSPYNAY 130 (523)
Q Consensus 63 ~~~~~~kyG~v~~i~~~-~~---~~v~v~dp~~~~~il~~~~~~~~~~~~~------~-~~~~~-~~~~~~~~~~~~g~~ 130 (523)
+.+++++ |||++++++ +. ++++|+||+++++|+.++. .|++++.. . ..... ...+.+ ++..+|+.
T Consensus 19 ~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~ 95 (398)
T 1lfk_A 19 ADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ-QFSTRRRWDPRDEIGGKGIFRPRELVGN-LMDYDPPE 95 (398)
T ss_dssp CHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT-TEEECTTCCC-------------CCTTC-GGGCCTTH
T ss_pred hHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc-ccccccccccccccCCcccccccccccC-ccccCCHH
Confidence 3347766 999999875 45 8999999999999994332 35555431 1 11000 111223 34467999
Q ss_pred HHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHH-HHHHHHHHHHhcccccCcc
Q 009899 131 WREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGD-LNLNVILMMIAGKRYFGAR 209 (523)
Q Consensus 131 w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~-~~~~~i~~~~fG~~~~~~~ 209 (523)
|+++|+++. +.|+.++++.+++.+.+.++++++.+... ++ ++|+...+.. ++.++++. +||.+.
T Consensus 96 ~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------~~-~~d~~~~~~~~~~~~vi~~-~~G~~~---- 160 (398)
T 1lfk_A 96 HTRLRRKLT-PGFTLRKMQRMAPYIEQIVNDRLDEMERA--------GS-PADLIAFVADKVPGAVLCE-LVGVPR---- 160 (398)
T ss_dssp HHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHH--------CS-SEEHHHHTTTTHHHHHHHH-HHTCCG----
T ss_pred HHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CccHHHHHHHHHHHHHHHH-HcCCCH----
Confidence 999999998 78999999999999999999999999753 54 7999999987 88999987 589876
Q ss_pred cccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHH
Q 009899 210 AENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFID 289 (523)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~ 289 (523)
.+. ..+......++.. ....++..++.+.+.+++.+.|+++++. ...|+++
T Consensus 161 --~~~---~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~dll~ 211 (398)
T 1lfk_A 161 --DDR---DMFMKLCHGHLDA------------------SLSQKRRAALGDKFSRYLLAMIARERKE------PGEGMIG 211 (398)
T ss_dssp --GGH---HHHHHHHHHTTCT------------------TSCHHHHHHHHHHHHHHHHHHHHHHHHS------CCSSHHH
T ss_pred --HHH---HHHHHHHHHHHhc------------------ccchHHHHHHHHHHHHHHHHHHHHHHhC------CCCCHHH
Confidence 222 2444444433210 0123556677888899999999888764 3458999
Q ss_pred HHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcC
Q 009899 290 VLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEK 368 (523)
Q Consensus 290 ~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~ 368 (523)
.|++.. +. .+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 212 ~ll~~~-~~-------~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------- 267 (398)
T 1lfk_A 212 AVVAEY-GD-------DATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ---------------- 267 (398)
T ss_dssp HHHHHH-GG-------GSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH----------------
T ss_pred HHHHhc-CC-------CCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH----------------
Confidence 999865 21 34 788999999999999999999999999999999999999999975
Q ss_pred ChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCC
Q 009899 369 LVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQ 448 (523)
Q Consensus 369 lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~ 448 (523)
|++|||+|+||++|+++..++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||.
T Consensus 268 --~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------- 334 (398)
T 1lfk_A 268 --SAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP----------- 334 (398)
T ss_dssp --HHHHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC-----------
T ss_pred --HHHHHHHHHHHhCcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC-----------
Confidence 7999999999999999966699999999999999999999999999999999999999999999983
Q ss_pred cccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCc-ccccCcCCCcccccCCCceEE
Q 009899 449 HFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEA-WVDMTGTAGLTNIRATPLEIL 512 (523)
Q Consensus 449 ~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~ 512 (523)
..++|||+|+|.|+|++||++|++++++.|+++| ++++..+. ++.+. .+.+......++|.
T Consensus 335 -~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~--~~~~~~~~~~lpv~ 397 (398)
T 1lfk_A 335 -IPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADPAQDTEFR--LTTPAYGLTELMVA 397 (398)
T ss_dssp -CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSTTCCCEEE--CSSSBCEEEECEEE
T ss_pred -CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCCCCCccccc--cCcCcCCcccceee
Confidence 2379999999999999999999999999999999 89987532 22232 23333444555554
No 67
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00 E-value=1.3e-58 Score=447.57 Aligned_cols=371 Identities=19% Similarity=0.171 Sum_probs=295.8
Q ss_pred CCchHHHHHHHHhhCCeEEEEecC--eeEEEecCHHHHHHHHHhcccccCCCCCccccccccC--CC-cceeeCCCChhH
Q 009899 57 QLPHLALGALADKYGPLFSIRIGV--HPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGH--NY-ANFGFSPYNAYW 131 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~--~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~g~~w 131 (523)
.+++..+.++++ ||||+++...+ .+.++|++|+++++|+++. ..|++++.......... .. ...++..+|+.|
T Consensus 37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h 114 (415)
T 3mgx_A 37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQH 114 (415)
T ss_dssp TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHH
T ss_pred CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHHH
Confidence 578888988886 99999986334 7899999999999999655 35666654333221111 00 133566789999
Q ss_pred HHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhcccccCccc
Q 009899 132 REMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYFGARA 210 (523)
Q Consensus 132 ~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~ 210 (523)
+++|+++. +.|+.++++.+.+.+.+.++++++.+.+. + ++|+...+ ..+++++|+. +||.+.
T Consensus 115 ~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------~--~~dl~~~~~~~~~~~vi~~-l~G~~~----- 177 (415)
T 3mgx_A 115 RKLRKLVG-PLLSRAAARKLAERVRIEVGDVLGRVLDG--------E--VCDAATAIGPRIPAAVVCE-ILGVPA----- 177 (415)
T ss_dssp HHHHHHHG-GGSSHHHHHHSHHHHHHHHHHHTTTSSSS--------S--CEESTTTTTTHHHHHHHHH-HHTCCG-----
T ss_pred HHHHHHhH-hhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------C--CcchHHHHHHHHHHHHHHH-HcCCCH-----
Confidence 99999988 89999999999999999999988876431 3 68998877 6799999998 578654
Q ss_pred ccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHH
Q 009899 211 ENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDV 290 (523)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ 290 (523)
++. ..+....+.+...... ...| . ...++.+.+.+++.+.|+++++. ...|+++.
T Consensus 178 -~~~---~~~~~~~~~~~~~~~~----~~~~-------~----~~~~~~~~l~~~~~~~i~~rr~~------~~~dll~~ 232 (415)
T 3mgx_A 178 -EDE---DMLIDLTNHAFGGEDE----LFDG-------M----TPRQAHTEILVYFDELITARRKE------PGDDLVST 232 (415)
T ss_dssp -GGH---HHHHHHHHHHTSCCC--------C-------C----CHHHHHHHHHHHHHHHHHHHHHS------CCSSHHHH
T ss_pred -HHH---HHHHHHHHHHHcccCc----ccch-------H----HHHHHHHHHHHHHHHHHHHHHhC------CCCCHHHH
Confidence 222 3555665555432111 1111 0 11256778888999999888764 34589999
Q ss_pred HHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCC
Q 009899 291 LLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKL 369 (523)
Q Consensus 291 ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l 369 (523)
|++.. .+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|+
T Consensus 233 ll~~~----------~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------ 284 (415)
T 3mgx_A 233 LVTDD----------DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS------------------ 284 (415)
T ss_dssp HHHCT----------TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS------------------
T ss_pred HHhCC----------CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh------------------
Confidence 99753 23 78899999999999999999999999999999999999999996
Q ss_pred hhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCc
Q 009899 370 VYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQH 449 (523)
Q Consensus 370 p~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~ 449 (523)
||++|||+|+||++|+++. ++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+|+||.
T Consensus 285 ~~l~a~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~------------ 351 (415)
T 3mgx_A 285 ADVDTVVEEVLRWTSPAMH-VLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP------------ 351 (415)
T ss_dssp SCHHHHHHHHHHHHCCBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS------------
T ss_pred HhHHHHHHHHHHhcCcccc-cceecCCCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCC------------
Confidence 5999999999999999995 599999999999999999999999999999999999999999999982
Q ss_pred ccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEeecc
Q 009899 450 FELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLKPR 516 (523)
Q Consensus 450 ~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r 516 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++.. + ..+........++|++++|
T Consensus 352 ~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~--~--~~~~~~~~~~~lpv~~~~R 415 (415)
T 3mgx_A 352 NRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLEREPA--W--LRAIVVQGYRELPVRFTGR 415 (415)
T ss_dssp CCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEECSCCE--E--CSCSSBCCEEECEEEEEEC
T ss_pred CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCCccCCCcc--c--ccCCcccCceeeeEEEecC
Confidence 2479999999999999999999999999999999 899875432 2 1233344567899999987
No 68
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00 E-value=5.6e-58 Score=446.20 Aligned_cols=379 Identities=22% Similarity=0.234 Sum_probs=296.4
Q ss_pred CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccc-ccc-------CCCcceeeCCCC
Q 009899 57 QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGK-LLG-------HNYANFGFSPYN 128 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~g 128 (523)
.+++.++.++ ++||||++++.| .++|++|+++++|++++. .+++++...... ..+ ... ..++..+|
T Consensus 29 ~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~dg 102 (418)
T 3r9b_A 29 ADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHPS-SCSDRTKSTIFQRQLAAETQPRPQGP-ASFLFLDP 102 (418)
T ss_dssp TCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCTT-EECCGGGCHHHHHHHC---------C-CCGGGCCT
T ss_pred cCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCcc-cccCcccccccccccccccccccccc-cchhhcCC
Confidence 7788999888 578999998765 899999999999997653 344444322111 111 112 23455679
Q ss_pred hhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhcccccC
Q 009899 129 AYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYFG 207 (523)
Q Consensus 129 ~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~ 207 (523)
+.|+++|+++. +.|++++++.+++.+.+.++++++ +.. +. .+|+...+ ..+++++++. +||.+.
T Consensus 103 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~-l~~---------~~-~~d~~~~~~~~~~~~vi~~-~~G~~~-- 167 (418)
T 3r9b_A 103 PDHTRLRGLVS-KAFAPRVIKRLEPEITALVDQLLD-AVD---------GP-EFNLIDNLAYPLPVAVICR-LLGVPI-- 167 (418)
T ss_dssp THHHHHHHHHH-GGGSHHHHGGGHHHHHHHHHHHHH-TCC---------SS-EEEHHHHTTTHHHHHHHHH-HHTCCG--
T ss_pred chHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHh-hhc---------cC-CeehHHHHhCcCCHHHHHH-HcCCCH--
Confidence 99999999998 899999999999999999999988 632 22 68876555 6899999999 899877
Q ss_pred cccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccH
Q 009899 208 ARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDF 287 (523)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~ 287 (523)
.+.+ .+......+...... .+.+.++ .....++..++.+.+.+++.+.++++++. ...|+
T Consensus 168 ----~~~~---~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~r~~~------~~~d~ 227 (418)
T 3r9b_A 168 ----EDEP---KFSRASALLAAALDP------FLALTGE-TSDLFDEQMKAGMWLRDYLRALIDERRRT------PGEDL 227 (418)
T ss_dssp ----GGHH---HHHHHHHHHHHTTSC------HHHHHSS-CCTTHHHHHHHHHHHHHHHHHHHHHTTTS------CCSSH
T ss_pred ----HHHH---HHHHHHHHHHhhcCc------ccccccc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhC------CCccH
Confidence 3332 344444433322111 1111111 11235677788888999999999877653 35699
Q ss_pred HHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhh
Q 009899 288 IDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDI 366 (523)
Q Consensus 288 ~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 366 (523)
++.|++...++ ..+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 228 l~~ll~~~~~~------~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~-------------- 287 (418)
T 3r9b_A 228 MSGLVAVEESG------DQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS-------------- 287 (418)
T ss_dssp HHHHHHHHHHS------SSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG--------------
T ss_pred HHHHHHhhhcc------CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH--------------
Confidence 99999874432 245 889999999999999999999999999999999999999999975
Q ss_pred cCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCC
Q 009899 367 EKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVK 446 (523)
Q Consensus 367 ~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~ 446 (523)
|++|||+|+||++|+++.. +|.+++|++++||.||+|+.|.++.+++||||++|+||++|+|||+
T Consensus 288 ----~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~---------- 352 (418)
T 3r9b_A 288 ----RASAVIEETMRYDPPVQLV-SRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA---------- 352 (418)
T ss_dssp ----GHHHHHHHHHHHSCSBCCE-EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS----------
T ss_pred ----hHHHHHHHHHHhCCccccc-eeEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC----------
Confidence 7999999999999999985 7999999999999999999999999999999999999999999992
Q ss_pred CCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEeeccC
Q 009899 447 GQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLKPRL 517 (523)
Q Consensus 447 ~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 517 (523)
+..++|||.|+|.|+|++||++|++++++.|+++| ++++.++. . ...+.+.++...++|+++||+
T Consensus 353 --~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~--~~~~~~~~~~~~lpv~~~~r~ 418 (418)
T 3r9b_A 353 --QIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGEP--E--YKRNLTLRGMSTLSIAVHHHH 418 (418)
T ss_dssp --CCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC--E--ECSCSSBCCEEECEEEC----
T ss_pred --CCCCcCCCCcCccCccHHHHHHHHHHHHHHHHHhCccceeCCCC--c--cccCCcccCcceeEEEecCCC
Confidence 12479999999999999999999999999999999 89987642 2 234456677889999999884
No 69
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00 E-value=3e-57 Score=439.95 Aligned_cols=376 Identities=15% Similarity=0.132 Sum_probs=294.5
Q ss_pred CCchHHHHHHHHhhCCeEEEEe-cCeeEEEecCHHHHHHHHHhcccccCCCCC---ccccc-----c-ccCCCcceeeCC
Q 009899 57 QLPHLALGALADKYGPLFSIRI-GVHPALVVSSWEMAKELFTKHDVDISSRPK---LTVGK-----L-LGHNYANFGFSP 126 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~-~~~~~v~v~dp~~~~~il~~~~~~~~~~~~---~~~~~-----~-~~~~~~~~~~~~ 126 (523)
.+++..+.+++++ |||+++.. ++.+.++|++++++++|++++. .|++.+. ..... . ..... ..++..
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~ 114 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNHD-IFSSDAGYGGIIIDDGIQKGGDGGLDL-PNFIAM 114 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCTT-TEECCGGGTCSSSSCCC-------CCC-CCGGGC
T ss_pred CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCCc-ccccccccCCCCccccccccccccccc-Cccccc
Confidence 5678889888876 99999986 4567999999999999998763 3554431 11111 0 11111 234567
Q ss_pred CChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhcccc
Q 009899 127 YNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRY 205 (523)
Q Consensus 127 ~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~ 205 (523)
+|+.|+++|+++. +.|++++++.+.+.+.+.++++++.+.. ++ ++|+...+ ..++.++++. +||.+.
T Consensus 115 dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---------~~-~~dl~~~~~~~~~~~vi~~-l~G~~~ 182 (426)
T 3rwl_A 115 DRPRHDEQRKAVS-PIVAPANLAALEGTIRERVSKTLDGLPV---------GE-EFDWVDRVSIEITTQMLAT-LFDFPF 182 (426)
T ss_dssp CTTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHTSCS---------SS-CEEHHHHTHHHHHHHHHHH-HHTCCG
T ss_pred CchHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhhc---------CC-CcchHHHHHHHHHHHHHHH-HcCCCH
Confidence 8999999999998 8999999999999999999999887722 33 78977776 6788888876 899765
Q ss_pred cCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 009899 206 FGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDL 285 (523)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~ 285 (523)
++.+ .+....+.+..... +.. ....+...++.+.+.+++.+.++++++. . ...
T Consensus 183 ------~~~~---~~~~~~~~~~~~~~--------~~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~--~~~ 235 (426)
T 3rwl_A 183 ------EERR---KLTRWSDVTTAAPG--------GGV-----VESWDQRKTELLECAAYFQVLWNERVNK---D--PGN 235 (426)
T ss_dssp ------GGTH---HHHHHHHHHTCCTT--------SSS-----CSSHHHHHHHHHHHHHHHHHHHHHHHTS---C--CCS
T ss_pred ------HHHH---HHHHHHHHHHhccC--------ccc-----cccHHHHHHHHHHHHHHHHHHHHHHhhc---C--CCC
Confidence 3332 33333332221100 100 1124455667788889999999887322 1 456
Q ss_pred cHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChh
Q 009899 286 DFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCES 364 (523)
Q Consensus 286 d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 364 (523)
|+++.|++...++ .+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 236 dll~~ll~~~~~~-------~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~~------------ 296 (426)
T 3rwl_A 236 DLISMLAHSPATR-------NMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPA------------ 296 (426)
T ss_dssp SHHHHHHHCGGGG-------GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------
T ss_pred CHHHHHHhcccCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhChH------------
Confidence 9999999875443 34 889999999999999999999999999999999999999999853
Q ss_pred hhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCC
Q 009899 365 DIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVD 444 (523)
Q Consensus 365 ~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~ 444 (523)
|++|||+|+||++|+++. .+|.+++|++++||.||+|+.|.++.+++||||++|+||++|+|+||.+
T Consensus 297 ------~l~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~------ 363 (426)
T 3rwl_A 297 ------LVETMVPEIIRWQTPLAH-MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP------ 363 (426)
T ss_dssp ------GHHHHHHHHHHHHCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT------
T ss_pred ------hHHHHHHHHHHhcCcccc-CceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC------
Confidence 899999999999999997 5999999999999999999999999999999999999999999999943
Q ss_pred CCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEeec
Q 009899 445 VKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLKP 515 (523)
Q Consensus 445 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 515 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++.. + ..+.+......++|+++|
T Consensus 364 -----~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~--~--~~~~~~~g~~~lpv~~~P 426 (426)
T 3rwl_A 364 -----RQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEPE--R--VRSNFVRGYAKMMVRVHA 426 (426)
T ss_dssp -----TCCSTTCCSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSCCE--E--CCCSSBCCEEECEEEEEC
T ss_pred -----CCccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCCCc--c--cccccccCcceeeEEEeC
Confidence 3489999999999999999999999999999999 999876532 2 123334456788888876
No 70
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00 E-value=3.1e-56 Score=432.19 Aligned_cols=374 Identities=18% Similarity=0.178 Sum_probs=291.6
Q ss_pred CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCC-cc-ccc----cccCCCcceeeCCCChh
Q 009899 57 QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPK-LT-VGK----LLGHNYANFGFSPYNAY 130 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~-~~-~~~----~~~~~~~~~~~~~~g~~ 130 (523)
.+++.+ ++.++||||+++..++.. ++|++++++++|++++. +..... .. ... .........++..+|+.
T Consensus 33 ~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 107 (416)
T 3p3o_A 33 NFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGAD 107 (416)
T ss_dssp TCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCCHHH
T ss_pred cCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCCchH
Confidence 556666 555689999999887666 99999999999998764 222111 00 000 00000012356678999
Q ss_pred HHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHH-HHHHHHHHHHHHHhcccccCcc
Q 009899 131 WREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKW-FGDLNLNVILMMIAGKRYFGAR 209 (523)
Q Consensus 131 w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~-~~~~~~~~i~~~~fG~~~~~~~ 209 (523)
|+++|+++. +.|++++++.+.+.+.+.++++++.+ .. | .+|+... ...+++++++. +||.+.
T Consensus 108 h~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l-~~--------g--~~d~~~~~~~~~~~~vi~~-l~G~~~---- 170 (416)
T 3p3o_A 108 HRRLRGLAT-HPFTPRRITAVQPFVRSTVEQLIDKL-PQ--------G--DFDFVQHFPHPLPALVMCQ-LLGFPL---- 170 (416)
T ss_dssp HHHHHHTTC-GGGSHHHHHHHHHHHHHHHHHHHHTC-CS--------S--SEEHHHHTTTHHHHHHHHH-HHTCCG----
T ss_pred HHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhh-cc--------C--CccHHHHHHHHHHHHHHHH-HhCCCH----
Confidence 999999998 89999999999999999999999887 31 4 5886554 46799999998 588765
Q ss_pred cccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHH
Q 009899 210 AENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFID 289 (523)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~ 289 (523)
++. ..+......+...... . ......++..++.+.+.+++.+.|+++++. ...|+++
T Consensus 171 --~~~---~~~~~~~~~~~~~~~~---------~---~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~------~~~dll~ 227 (416)
T 3p3o_A 171 --EDY---DTVGRLSIETNLGLAL---------S---NDQDILVKVEQGLGRMFDYLVAAIEKRKVE------PGDDLTS 227 (416)
T ss_dssp --GGH---HHHHHHHHTTCGGGTT---------C---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHS------CCSSHHH
T ss_pred --HHH---HHHHHHHHHHHhhccc---------c---cchhhHHHHHHHHHHHHHHHHHHHHHHHhC------CCccHHH
Confidence 222 2444444433221110 0 012235667778888999999999988764 4468999
Q ss_pred HHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcC
Q 009899 290 VLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEK 368 (523)
Q Consensus 290 ~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~ 368 (523)
.|++...++ .+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus 228 ~ll~~~~~~-------~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~---------------- 284 (416)
T 3p3o_A 228 DIVRAFHDG-------VLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE---------------- 284 (416)
T ss_dssp HHHHHHHTT-------SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG----------------
T ss_pred HHHHhhccC-------CCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH----------------
Confidence 999875532 45 889999999999999999999999999999999999999999975
Q ss_pred ChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCC
Q 009899 369 LVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQ 448 (523)
Q Consensus 369 lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~ 448 (523)
|++|||+|+||++|++|...+|.+++|++++||.||+|+.|.++.+++||||++|+||++|+|+||..
T Consensus 285 --~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~---------- 352 (416)
T 3p3o_A 285 --LAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE---------- 352 (416)
T ss_dssp --GHHHHHHHHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS----------
T ss_pred --HHHHHHHHHHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC----------
Confidence 79999999999999997677999999999999999999999999999999999999999999999842
Q ss_pred cccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcc-eecCCCcccccCcCCCcccccCCCceEEeec
Q 009899 449 HFELLPFGGGRRACPGISFALQMSHLALAAFLHAFD-ISTPGEAWVDMTGTAGLTNIRATPLEILLKP 515 (523)
Q Consensus 449 ~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 515 (523)
..++|||.|+|.|+|++||++|++++++.|+++|+ +++.++. .+. .+...+....++|++.|
T Consensus 353 -~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~--~~~~~~g~~~lpv~~~p 415 (416)
T 3p3o_A 353 -APSIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGEI--TWR--HELGVAGPDALPLRFGA 415 (416)
T ss_dssp -SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSCC--EEC--CCTTCCCEEECEEEESC
T ss_pred -CCeecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCCC--cee--cCCCccCcceeeEEEec
Confidence 24799999999999999999999999999999995 8887643 232 22334455678888764
No 71
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00 E-value=1.1e-55 Score=425.24 Aligned_cols=371 Identities=17% Similarity=0.187 Sum_probs=287.8
Q ss_pred CCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc-ccccccCCCcceeeCCCChhHHHHH
Q 009899 57 QLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT-VGKLLGHNYANFGFSPYNAYWREMR 135 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~w~~~R 135 (523)
.+++..+.++++ +|||+++..| .++|++++.++++++++ .|+.++... ...... .+ ..++..+|+.|+++|
T Consensus 20 ~dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~-~~-~~l~~~dg~~h~~~R 91 (394)
T 2wiy_A 20 NNPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAV-AS-DTALGSDPPHHTVLR 91 (394)
T ss_dssp HCCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGG-GG-GSGGGCCTTHHHHHH
T ss_pred cCccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC--Cccccccccccccchh-cc-cccccCCchHHHHHH
Confidence 467788888865 5899987543 68999999999999754 244332111 111111 11 234667899999999
Q ss_pred HhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHHHHHHHHHhcccccCcccccchH
Q 009899 136 KITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWFGDLNLNVILMMIAGKRYFGARAENDET 215 (523)
Q Consensus 136 ~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~ 215 (523)
+++. +.|++++++.+.+.+.+.++++++.+.. ++ ++|+...+..+++++++..+||.+. ++.+
T Consensus 92 ~~~~-~~fs~~~~~~~~~~i~~~~~~l~~~~~~---------~~-~~d~~~~~~~~~~~vi~~~~~G~~~------~~~~ 154 (394)
T 2wiy_A 92 RQTN-KWFTPKLVDGWVRTTRELVGDLLDGVEA---------GQ-VIEARRDLAVVPTHVTMARVLQLPE------DDAD 154 (394)
T ss_dssp HHHH-TTCSHHHHHHHTHHHHHHHHHHHHTCCT---------TC-CEEHHHHHTHHHHHHHHHHHHTCCC------CCHH
T ss_pred HHHH-hccCHHHHHHHHHHHHHHHHHHHHHHhc---------cC-CeeHHHHHHhhhHHHHHHHHcCCCH------hHHH
Confidence 9998 8999999999999999999888876632 44 7999999999999999999999875 3322
Q ss_pred HHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHh
Q 009899 216 EVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVL 295 (523)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~ 295 (523)
.+...+.+.... ....|.. ...++..++.+.+.+++.+.|++++.. ..+|+++.|++..
T Consensus 155 ---~~~~~~~~~~~~------~~~~p~~------~~~~~~~~~~~~l~~~~~~~i~~rr~~------~~~dll~~Ll~~~ 213 (394)
T 2wiy_A 155 ---AVMEAMFEAMLM------QSAEPAD------GDVDRAAVAFGYLSARVAEMLEDKRVN------PGDGLADSLLDAA 213 (394)
T ss_dssp ---HHHHHHHHHHGG------GSSSCCT------THHHHHHHHHHHHHHHHHHHHHHHHHS------CCSSHHHHHHHHH
T ss_pred ---HHHHHHHHHHHh------ccCCccc------hHHHHHHHHHHHHHHHHHHHHHHhhcC------CCCcHHHHHHHhh
Confidence 344443322211 0111211 122445556777888899999887753 3358999999875
Q ss_pred hhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHH
Q 009899 296 EGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQA 374 (523)
Q Consensus 296 ~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a 374 (523)
.++ .+ ++++.+++..+++||+|||+.+++|++++|++||++|++|++|++ |++|
T Consensus 214 ~~~-------~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a 268 (394)
T 2wiy_A 214 RAG-------EITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDES------------------ARAA 268 (394)
T ss_dssp HTT-------SSCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHH
T ss_pred hcC-------CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhChH------------------hHHH
Confidence 432 35 888999999999999999999999999999999999999999863 7899
Q ss_pred HHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccc
Q 009899 375 VIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLP 454 (523)
Q Consensus 375 ~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~ 454 (523)
||+|+||++|+++. ++|.+++|++++|+.||+|+.|.++.+++||||++|+||++|+|+||+.. ..++|
T Consensus 269 ~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~----------~~~l~ 337 (394)
T 2wiy_A 269 IINEMVRMDPPQLS-FLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA----------SRNLS 337 (394)
T ss_dssp HHHHHHHHSCSBCE-EEEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG----------SCCST
T ss_pred HHHHHHhhCCCccC-eeEEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC----------CCccC
Confidence 99999999999985 58999999999999999999999999999999999999999999999742 24799
Q ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHhhcc-eecCCCcccccCcCCCcccccCCCceEEe
Q 009899 455 FGGGRRACPGISFALQMSHLALAAFLHAFD-ISTPGEAWVDMTGTAGLTNIRATPLEILL 513 (523)
Q Consensus 455 Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 513 (523)
||+|+|.|+|++||++|++++++.|+++|+ +++.++. .+. .+...+....++|++
T Consensus 338 FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~--~~~--~~~~~~g~~~lpv~~ 393 (394)
T 2wiy_A 338 FGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEEP--TVA--HNDFARRYRKLPIVL 393 (394)
T ss_dssp TCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCEEESSCC--EEC--CCSSBCCEEECEEEE
T ss_pred CCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCceECCCC--ccc--ccccccCcceeeEEe
Confidence 999999999999999999999999999998 8987643 222 222344456677765
No 72
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00 E-value=6.5e-56 Score=423.30 Aligned_cols=354 Identities=17% Similarity=0.203 Sum_probs=278.0
Q ss_pred hHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCC--c-ccc----cc--ccC-CCcceeeCCCCh
Q 009899 60 HLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPK--L-TVG----KL--LGH-NYANFGFSPYNA 129 (523)
Q Consensus 60 ~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~--~-~~~----~~--~~~-~~~~~~~~~~g~ 129 (523)
+..+.++ ++||||+++ | +.++|+||+++++|+.++ ..|++++. . .+. .. .+. .+.+ ++..+|+
T Consensus 2 ~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~g~ 74 (368)
T 1io7_A 2 YDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYT-MLTSDPP 74 (368)
T ss_dssp HHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSS-GGGCCTT
T ss_pred CHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccc-cccCCCh
Confidence 4566777 589999987 4 589999999999999875 35777664 1 011 01 111 1123 3456799
Q ss_pred hHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhcccccCc
Q 009899 130 YWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYFGA 208 (523)
Q Consensus 130 ~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~ 208 (523)
.|+++|+++. +.|++++++.+++.+.+.++++++.+ .. | ++|+...+ ..+++++++.+ ||.+.
T Consensus 75 ~h~~~R~~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l-~~--------g--~~d~~~~~~~~~~~~vi~~~-~G~~~--- 138 (368)
T 1io7_A 75 LHDELRSMSA-DIFSPQKLQTLETFIRETTRSLLDSI-DP--------R--EDDIVKKLAVPLPIIVISKI-LGLPI--- 138 (368)
T ss_dssp HHHHHHGGGT-TTTCHHHHHHHHHHHHHHHHHHHHTC-CT--------T--SEEHHHHTTTHHHHHHHHHH-HTCCG---
T ss_pred HHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHh-hc--------C--CccHHHHHHHHHHHHHHHHH-hCCCH---
Confidence 9999999998 89999999999999999999998887 32 4 68999876 78999999999 99876
Q ss_pred ccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHH
Q 009899 209 RAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFI 288 (523)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~ 288 (523)
.+.+ .+......+.... . .|. ..++..++.+.+.+++.+.+ + ...|++
T Consensus 139 ---~~~~---~~~~~~~~~~~~~-----~--~p~--------~~~~~~~~~~~~~~~~~~~i-------~----~~~d~l 186 (368)
T 1io7_A 139 ---EDKE---KFKEWSDLVAFRL-----G--KPG--------EIFELGKKYLELIGYVKDHL-------N----SGTEVV 186 (368)
T ss_dssp ---GGHH---HHHHHGGGCTTSC-----C--CTT--------CHHHHHHHHHHHHHHHHHHT-------T----SSCHHH
T ss_pred ---HHHH---HHHHHHHHHHhcc-----C--ChH--------HHHHHHHHHHHHHHHHHHHh-------C----CCCCHH
Confidence 2222 3333332221100 0 121 12445556667777777766 1 346899
Q ss_pred HHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhc
Q 009899 289 DVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIE 367 (523)
Q Consensus 289 ~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~ 367 (523)
+.|++. .+ ++++.+++..+++||+|||+.+++|++++|++|| +|++|++| +
T Consensus 187 ~~ll~~-----------~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~--------------- 238 (368)
T 1io7_A 187 SRVVNS-----------NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N--------------- 238 (368)
T ss_dssp HHHHTS-----------SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T---------------
T ss_pred HHHHhc-----------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c---------------
Confidence 999854 23 7889999999999999999999999999999999 99999999 2
Q ss_pred CChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCC
Q 009899 368 KLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKG 447 (523)
Q Consensus 368 ~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~ 447 (523)
|++|||+|+||++|+++ .++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+|||+ +
T Consensus 239 ---~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~--~-------- 304 (368)
T 1io7_A 239 ---LYLKAIEEALRYSPPVM-RTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN--P-------- 304 (368)
T ss_dssp ---CHHHHHHHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC--S--------
T ss_pred ---hHHHHHHHHHHhCcccc-cCceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCC--C--------
Confidence 79999999999999999 569999999999999999999999999999999999999999999994 1
Q ss_pred CcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhcc-eecCCCcccccCcCCCcccccCCCceEEeeccC
Q 009899 448 QHFELLPFGGGRRACPGISFALQMSHLALAAFLHAFD-ISTPGEAWVDMTGTAGLTNIRATPLEILLKPRL 517 (523)
Q Consensus 448 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 517 (523)
..++|||.|+|.|+|++||++|++++++.|+++|+ +++.+ . .+. .+.+..+...++|++++|+
T Consensus 305 --~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~--~~~--~~~~~~~~~~lpv~~~~r~ 368 (368)
T 1io7_A 305 --NPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD-T--EKV--PNEVLNGYKRLVVRLKSNE 368 (368)
T ss_dssp --CCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE-E--EEC--CCSSBCCEEEEEEEEEC--
T ss_pred --CCCcCCCCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC-c--eec--cCCcccCCceeEEEeccCC
Confidence 24799999999999999999999999999999996 99865 2 222 2334556788999999985
No 73
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00 E-value=7.1e-55 Score=411.95 Aligned_cols=319 Identities=19% Similarity=0.163 Sum_probs=253.6
Q ss_pred HhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCC-ccccccccCCCcceeeCCCChhHHHHHHhHHHhcCCHH
Q 009899 68 DKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPK-LTVGKLLGHNYANFGFSPYNAYWREMRKITASELLSNR 146 (523)
Q Consensus 68 ~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~ 146 (523)
++||||+++ | .++|+||+++++|+.++. .|++++. ... ..++.++ +..+|+.|+++|+++. +.|+.+
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~----~~~~~~l-~~~~g~~~~~~R~~~~-~~fs~~ 69 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMNDK-IFSSNPGNRYS----NAGGISF-ITMDNPEHKEFRDISA-PYFLPS 69 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCTT-TEESSCSSCCC-------CCGG-GGCCHHHHHHHHHHHH-HHHSHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhChh-hcccCCcCCCC----Ccccccc-ccCCchHHHHHHHHhh-hhcCHH
Confidence 589999986 3 899999999999998763 5766652 111 1122233 4568999999999998 899999
Q ss_pred HHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHH
Q 009899 147 RLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIR 225 (523)
Q Consensus 147 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~ 225 (523)
+++.+.+.+.+.++++++.+. ++|+...+ ..+++++++.+ ||.+. .+. ..+.....
T Consensus 70 ~l~~~~~~i~~~~~~l~~~l~-------------~~d~~~~~~~~~~~~vi~~~-~G~~~------~~~---~~~~~~~~ 126 (343)
T 2rfb_A 70 KINDYKDFIEETSNDLIKNID-------------NKDIISEYAVRLPVNIISKI-LGIPD------SDM---PLFKLWSD 126 (343)
T ss_dssp HHGGGHHHHHHHHHHHHTTCT-------------TSCHHHHTTTHHHHHHHHHH-HTCCG------GGH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcc-------------ccCHHHHHhhhhhHHHHHHH-cCCCH------HHH---HHHHHHHH
Confidence 999999999999988876552 47888765 89999999998 99876 222 24555554
Q ss_pred HHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCC
Q 009899 226 NFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDF 305 (523)
Q Consensus 226 ~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~ 305 (523)
.++... .|.+. ..++. ++.+.+.+++.+.+ ..| ++.|++...+ +.
T Consensus 127 ~~~~~~--------~p~~~------~~~~~-~~~~~~~~~~~~~i-------------~~d-l~~ll~~~~~------~~ 171 (343)
T 2rfb_A 127 YIIGNK--------RDENF------NYVNN-RMVSRLLEIFKSDS-------------HGI-INVLAGSSLK------NR 171 (343)
T ss_dssp HHHTSC--------CSSHH------HHHHH-HHHHHHHHHHHSCC-------------SSH-HHHHHTCBCS------SS
T ss_pred HHhhcc--------Ccchh------hHHHH-HHHHHHHHHHHHHH-------------hcc-HHHHHhhhcC------CC
Confidence 443311 13210 11233 44555555554443 247 8888865321 22
Q ss_pred ch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCC
Q 009899 306 DV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYP 384 (523)
Q Consensus 306 ~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p 384 (523)
.+ ++++.+++..+++||+|||+.+++|++++|++||++|+++++|+ +|||+|+||++|
T Consensus 172 ~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~a~i~E~lRl~p 230 (343)
T 2rfb_A 172 KLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR---------------------SGFVEETLRYYS 230 (343)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH---------------------HHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc---------------------HHHHHHHHhhCc
Confidence 45 88999999999999999999999999999999999999999986 789999999999
Q ss_pred CC-ccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCc
Q 009899 385 AG-PLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACP 463 (523)
Q Consensus 385 ~~-~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~ 463 (523)
++ + .++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+|||| ..++|||.|+|.|+
T Consensus 231 ~~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~-------------~~~~~FG~G~r~C~ 296 (343)
T 2rfb_A 231 PIQF-LPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR-------------EMHLAFGIGIHMCL 296 (343)
T ss_dssp SBCC-BCCCEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS-------------SCCCTTCCSTTSCT
T ss_pred cccc-ccceEECCCeEECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC-------------CCCccCCCCCccCC
Confidence 99 8 569999999999999999999999999999999999999999999995 13799999999999
Q ss_pred cHHHHHHHHHHHHHHHHhhcc-eecCCCc
Q 009899 464 GISFALQMSHLALAAFLHAFD-ISTPGEA 491 (523)
Q Consensus 464 G~~~A~~~~~~~~~~ll~~~~-~~~~~~~ 491 (523)
|++||++|++++++.|+++|+ +++.++.
T Consensus 297 G~~lA~~e~~~~la~ll~~f~~~~~~~~~ 325 (343)
T 2rfb_A 297 GAPLARLEASIALNDILNHFKRIKIDYKK 325 (343)
T ss_dssp THHHHHHHHHHHHHHHHHHCSCCCBCTTT
T ss_pred ChHHHHHHHHHHHHHHHHhCCCceeCCCc
Confidence 999999999999999999996 9987743
No 74
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00 E-value=1.3e-54 Score=413.45 Aligned_cols=352 Identities=16% Similarity=0.175 Sum_probs=274.1
Q ss_pred hHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCC-cc--c-----c-ccccCC-CcceeeCCCCh
Q 009899 60 HLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPK-LT--V-----G-KLLGHN-YANFGFSPYNA 129 (523)
Q Consensus 60 ~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~-~~--~-----~-~~~~~~-~~~~~~~~~g~ 129 (523)
+..+.++ ++||||++++ | .++|++|+++++|+.+++ .|++++. .. + . ...+.. ..++ +..+|+
T Consensus 2 ~~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~dg~ 74 (367)
T 3b4x_A 2 YDWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLNDHK-RFSSNLTGYNDKLEMLRSGKVFFDIPTRYTM-LTSDPP 74 (367)
T ss_dssp HHHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHCTT-TEECCCSSTTTTHHHHHHTCCCCCCGGGSSG-GGCCTT
T ss_pred CHHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcCch-hhccCcccccccccccccccchhhccccccc-ccCCch
Confidence 4566667 4799999987 3 799999999999998763 5666642 21 1 1 111200 1233 445799
Q ss_pred hHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhcccccCc
Q 009899 130 YWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYFGA 208 (523)
Q Consensus 130 ~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~ 208 (523)
.|+++|+++. +.|+.++++. +.+.+.++++++.+. | .+|+...+ ..+++++|+. +||.+ .
T Consensus 75 ~h~~~R~~~~-~~fs~~~l~~--~~i~~~~~~l~~~l~----------g--~~d~~~~~~~~~~~~vi~~-~~G~~-~-- 135 (367)
T 3b4x_A 75 LHDELRNLTA-DAFNPSNLPV--DFVREVTVKLLSELD----------E--EFDVIESFAIPLPILVISK-MLGIN-P-- 135 (367)
T ss_dssp HHHHHHHTTG-GGGSGGGSCH--HHHHHHHHHHHHTCC----------S--EEEHHHHTTTHHHHHHHHH-HHTCC-C--
T ss_pred hHHHHHHHHH-HhcCHhhhcc--hHHHHHHHHHHHhcc----------C--CcchHHHHHHhhHHHHHHH-HcCCC-C--
Confidence 9999999998 7899998877 888888887777652 2 58998765 7999999999 78875 1
Q ss_pred ccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHH
Q 009899 209 RAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFI 288 (523)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~ 288 (523)
. . ..+....+.+..... ..|.. .+.. ++.+.+.+++.+.++++++. ...|++
T Consensus 136 ---~-~---~~~~~~~~~~~~~~~------~~p~~--------~~~~-~~~~~~~~~~~~~i~~r~~~------~~~dll 187 (367)
T 3b4x_A 136 ---D-V---KKVKDWSDLVALRLG------RADEI--------FSIG-RKYLELISFSKKELDSRKGK------EIVDLT 187 (367)
T ss_dssp ---C-H---HHHHHHHHHHHTTTT------STTGG--------GCCC-HHHHHHHHHHHHHHHHHTTT------CCSSHH
T ss_pred ---c-H---HHHHHHHHHHHhccC------CChhh--------HHHH-HHHHHHHHHHHHHHHHHhcC------CCCCHH
Confidence 1 1 244444444433211 12211 0111 46677888888888877653 345899
Q ss_pred HHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhc
Q 009899 289 DVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIE 367 (523)
Q Consensus 289 ~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~ 367 (523)
+.|++. .+ ++++.+++..+++||+|||+.+++|++++|++ |++|++|++|++
T Consensus 188 ~~ll~~-----------~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~--------------- 240 (367)
T 3b4x_A 188 GKIANS-----------NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA--------------- 240 (367)
T ss_dssp HHHHTS-----------SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS---------------
T ss_pred HHHHhc-----------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc---------------
Confidence 999864 23 78899999999999999999999999999999 999999999964
Q ss_pred CChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCC
Q 009899 368 KLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKG 447 (523)
Q Consensus 368 ~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~ 447 (523)
+|||+|+||++|+++ .++|.+++|++++||.||+|+.|.++.+++||||++|+||++|+||||.
T Consensus 241 -----~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~---------- 304 (367)
T 3b4x_A 241 -----LKAVEEALRFSPPVM-RTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP---------- 304 (367)
T ss_dssp -----HHHHHHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS----------
T ss_pred -----hHHHHHHHHhcCccc-CeeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC----------
Confidence 789999999999999 5699999999999999999999999999999999999999999999993
Q ss_pred CcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEeec
Q 009899 448 QHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILLKP 515 (523)
Q Consensus 448 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 515 (523)
..++|||.|+|.|+|++||++|++++++.|+++| ++++.++ .+.. +.+......++|++++
T Consensus 305 --~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~---~~~~--~~~~~~~~~lpv~~~~ 366 (367)
T 3b4x_A 305 --NPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK---EKID--NEVLNGYRKLVVRVER 366 (367)
T ss_dssp --CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE---EECC--CSSBCSEEEEEEEEEE
T ss_pred --CCCcCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc---cccc--cccccCcceEEEEecC
Confidence 2479999999999999999999999999999999 6998763 3322 3344556788888764
No 75
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00 E-value=1.2e-53 Score=412.82 Aligned_cols=385 Identities=16% Similarity=0.188 Sum_probs=277.1
Q ss_pred CCCccccc---cccccCCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcccc---ccc
Q 009899 42 GKWPMIGH---LHLLAGPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVG---KLL 115 (523)
Q Consensus 42 ~~~p~~G~---~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~---~~~ 115 (523)
.++|.+|- ...+. .+|+..+.+++ ++|||+++ ++.+.++|++++++++|+++... |++....... ...
T Consensus 18 ~~~P~~~~dp~~~~~~--~dP~~~~~~lR-~~gPV~~~--~~~~~~~vt~~~~v~~vl~d~~~-fs~~~~~~~~~~~~~~ 91 (412)
T 4dnj_A 18 AGVPHLGIDPFALDYF--ADPYPEQETLR-EAGPVVYL--DKWNVYGVARYAEVYAVLNDPLT-FCSSRGVGLSDFKKEK 91 (412)
T ss_dssp TTSCEECCCTTSHHHH--HSCHHHHHHHH-HHCSSEEE--TTTTEEEECSHHHHHHHHTCTTT-EESTTCSSSSCTTTSC
T ss_pred CCCCccCCCCCCHHHH--hCcHHHHHHHH-hcCCEEEE--CCCCEEEECCHHHHHHHHcCCcc-ccCCCccccccccccc
Confidence 35787773 23344 67888888876 47999865 56678999999999999976643 4333221111 111
Q ss_pred cCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchH-HHHHHHHHHH
Q 009899 116 GHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEM-KKWFGDLNLN 194 (523)
Q Consensus 116 ~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl-~~~~~~~~~~ 194 (523)
.....+.++..||+.|+++|+++. ++|++++++.+++.+.+.++++++.+.+. ++ .+|+ .++...++.+
T Consensus 92 ~~~~~~~~~~~Dg~~H~r~R~~~~-~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~--------~~-~~D~v~~~~~~~~~~ 161 (412)
T 4dnj_A 92 PWRPPSLILEADPPAHTRTRAVLS-KVLSPATMKRLRDGFAAAADAKIDELLAR--------GG-NIDAIADLAEAYPLS 161 (412)
T ss_dssp CSSCCCTTTTCCTTHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHHHT--------TS-EEETCCCCCCHHHHH
T ss_pred cccCCCccccCChHHHHHHHhhcc-cccCHHHHHHhhHHHHHHHHHHHHhhhcc--------CC-CceeHHHHHhhhhHh
Confidence 112223456678999999999998 89999999999999999999999988664 33 4554 4555677788
Q ss_pred HHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 009899 195 VILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHR 274 (523)
Q Consensus 195 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 274 (523)
+++.+. |.+. .+......+...+ ...... . ............. ....+.+..
T Consensus 162 ~i~~l~-g~~~------~~~~~~~~~~~~~---~~~~~~------~--------~~~~~~~~~~~~~----~~~~~~~~~ 213 (412)
T 4dnj_A 162 VFPDAM-GLKQ------EGRENLLPYAGLV---FNAFGP------P--------NELRQSAIERSAP----HQAYVAEQC 213 (412)
T ss_dssp HHHHHH-TCCS------TTGGGHHHHHHHH---HHHTSC------S--------SHHHHHHHHTCHH----HHHHHHHHT
T ss_pred HHHHHc-CCch------hhhhhhhhhhhcc---cccccc------c--------HHHHHHHHHHHHH----HHHHHHHHH
Confidence 887765 4433 1111112222222 211110 0 0011111111222 222333333
Q ss_pred hhhcCCCCCCccHHHHHHHHhhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 009899 275 RKKESGANLDLDFIDVLLSVLEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDS 353 (523)
Q Consensus 275 ~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~ 353 (523)
++.. ...|.++.++....+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++|+||++|.
T Consensus 214 ~~~~----~~~~~~~~l~~~~~~------~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~-- 281 (412)
T 4dnj_A 214 QRPN----LAPGGFGACIHAFSD------TGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP-- 281 (412)
T ss_dssp SGGG----SCTTSHHHHHHHTTT------TTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG--
T ss_pred Hhhc----cccccchhhhHhhhh------ccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc--
Confidence 3222 223445555554332 2245 78899999999999999999999999999999999999999864
Q ss_pred hhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCC
Q 009899 354 VVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKP 433 (523)
Q Consensus 354 ~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P 433 (523)
.++.++++|++|++|+++.. +|.+++|++++||.||+|+.|.++.+++||||++|+||++|+|
T Consensus 282 ----------------~~~~~~~eE~lR~~pp~~~~-~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~P 344 (412)
T 4dnj_A 282 ----------------SLARNAFEEAVRFESPVQTF-FRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDI 344 (412)
T ss_dssp ----------------GGHHHHHHHHHHHHCSBCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCT
T ss_pred ----------------cccccccceeeeecCCcccc-cccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCC
Confidence 37889999999999999975 9999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEE
Q 009899 434 ERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEIL 512 (523)
Q Consensus 434 ~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 512 (523)
|||.. .++|||.|+|.|+|++||++|++++++.|+++| ++++.++. .+ ..+.+.++...++|+
T Consensus 345 eR~~~------------~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~~--~~--~~~~~~rg~~~LpV~ 408 (412)
T 4dnj_A 345 TRKTS------------GHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGPL--KR--RFNNTLRGLESLPIQ 408 (412)
T ss_dssp TSCCT------------TCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSCC--EE--EECSSBEEEEECEEE
T ss_pred CCCCC------------CCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCCC--ee--ecCCCccCCcceeEE
Confidence 99832 369999999999999999999999999999999 89987643 22 234455666789999
Q ss_pred eec
Q 009899 513 LKP 515 (523)
Q Consensus 513 ~~~ 515 (523)
++|
T Consensus 409 ~tP 411 (412)
T 4dnj_A 409 LTP 411 (412)
T ss_dssp EEE
T ss_pred EEe
Confidence 986
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00 E-value=4.2e-48 Score=372.96 Aligned_cols=373 Identities=12% Similarity=0.077 Sum_probs=271.3
Q ss_pred CCchHHHHHHHHhhC-CeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCccccccccCCCcceeeCCCChhHHHHH
Q 009899 57 QLPHLALGALADKYG-PLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLTVGKLLGHNYANFGFSPYNAYWREMR 135 (523)
Q Consensus 57 ~~~~~~~~~~~~kyG-~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 135 (523)
.+++..+.+++++.+ +++....++ ...+|+.++++++|+++.. .|++........ .+..........|++.|+++|
T Consensus 37 ~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~~-~fs~~~~~~~~~-~~~~~~~~~~~~D~p~H~r~R 113 (417)
T 4dxy_A 37 DGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDPT-RFSSEVIFLPKE-AGEKAQMVPTKMDPPEHTPYR 113 (417)
T ss_dssp GCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCTT-TEESSCCSSSTT-SSCSSCTTTTTCCTTTHHHHH
T ss_pred cChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCch-hccCCCcccccc-cccccccCcccCCcHHHHHHH
Confidence 456777777766544 455443333 5789999999999998653 355443321111 111222334566899999999
Q ss_pred HhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHHHHH-HHHHHHHHHHHHhcccccCcccccch
Q 009899 136 KITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMKKWF-GDLNLNVILMMIAGKRYFGARAENDE 214 (523)
Q Consensus 136 ~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~ 214 (523)
+++. ++|++++++.+++.+.+.++++++.+... | .+|+...+ ..+...+++. ++|... ++.
T Consensus 114 rll~-~~Fs~~~l~~~~~~i~~~~~~lld~l~~~--------g--~~D~v~~~a~~l~~~vi~~-llg~~~------~d~ 175 (417)
T 4dxy_A 114 KALD-KGLNLAKIRKVEDKVREVASSLIDSFAAR--------G--ECDFAAEYAELFPVHVFMA-LADLPL------EDI 175 (417)
T ss_dssp HHHH-HHHCHHHHHTTHHHHHHHHHHHHHHHHTT--------S--EEEHHHHTTTTHHHHHHHH-HTTCCG------GGH
T ss_pred HHhh-hhcCHHHHHHHHHHHHHHHHHHHHHhhhc--------C--CeeeHHHHHhhhHHHHHHH-HcCCCH------HHH
Confidence 9998 89999999999999999999999988653 4 57765555 4455555554 466654 333
Q ss_pred HHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccHHHHHHHH
Q 009899 215 TEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDSLIEEWIEEHRRKKESGANLDLDFIDVLLSV 294 (523)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~ 294 (523)
..+......+...... . ..........+.+.+.+++.++++++++. ..+|+++.|+..
T Consensus 176 ---~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~~~~~~~~~~li~~rr~~------~~ddl~s~L~~~ 233 (417)
T 4dxy_A 176 ---PVLSEYARQMTRPEGN------T-------PEEMATDLEAGNNGFYAYVDPIIRARVGG------DGDDLITLMVNS 233 (417)
T ss_dssp ---HHHHHHHHHHHSCCCS------S-------HHHHHHHHHHHHHHHHHHHHHHHHHHTTC------CCCSHHHHHHTC
T ss_pred ---HHHHhhhhhhcccccc------C-------hHHHHHHHHHHHHHHHHHHHHHHHHHhcC------Cccchhhhhccc
Confidence 2444444443221100 0 11234455566778888888888877643 456899998875
Q ss_pred hhhcCCCCCCCch-HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCChhhhcCChhHH
Q 009899 295 LEGEGVDLSDFDV-DTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRRELEKVKKELDSVVGKERLLCESDIEKLVYLQ 373 (523)
Q Consensus 295 ~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~ 373 (523)
..+ +..+ ++++.+++..+++||+|||+.+++|++++|++||++++++++|...+ .
T Consensus 234 ~~~------~~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~-----------------~- 289 (417)
T 4dxy_A 234 EIN------GERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL-----------------M- 289 (417)
T ss_dssp EET------TEECCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH-----------------H-
T ss_pred ccc------CCccchhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc-----------------c-
Confidence 433 2345 88999999999999999999999999999999999999999987643 1
Q ss_pred HHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCCCCCCCCCCCccccCCCCCCCCCCCccccc
Q 009899 374 AVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRVWSDPLEFKPERFLTAHKDVDVKGQHFELL 453 (523)
Q Consensus 374 a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~ 453 (523)
...|.+|++++.+. ..|.+++|++++|+.||+|+.|.++.+++||||++|+||++|+|+|+ +..++
T Consensus 290 -~avee~~~~~~~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~------------~~~~l 355 (417)
T 4dxy_A 290 -RGAEEMFRRFPVVS-EARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRR------------SISHS 355 (417)
T ss_dssp -HTHHHHHHHSCCBE-EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS------------CCCCC
T ss_pred -cceeeeeccccccc-cccccccceEecCccccCCCEEEEeehhhcCChhhCCCccccCCCCC------------CCCCC
Confidence 22344444555444 58999999999999999999999999999999999999999999994 13479
Q ss_pred ccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCcccccCCCceEEe
Q 009899 454 PFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTNIRATPLEILL 513 (523)
Q Consensus 454 ~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 513 (523)
|||.|+|.|+|++||++|++++++.|+++| ++++.++.. .+. .+.+......++|++
T Consensus 356 ~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~~~-~~~--~~~~~~g~~~LPv~~ 413 (417)
T 4dxy_A 356 TFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGET-PIY--HSGIVAAVENVPLVW 413 (417)
T ss_dssp TTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECTTCC-CEE--ECSSBCEEECCEEEC
T ss_pred CcCCCcccCccHHHHHHHHHHHHHHHHHhCCCceeCCCCC-eee--cCCcccCceeeeEEe
Confidence 999999999999999999999999999999 999876532 221 222334456777776
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2.8e-46 Score=351.65 Aligned_cols=333 Identities=14% Similarity=0.062 Sum_probs=220.7
Q ss_pred CCCC-CCCCcccccccccc---CCCCchHHHHHHHHhhCCeEEEEecCeeEEEecCHHHHHHHHHhcccccCCCCCcc-c
Q 009899 37 PPEA-AGKWPMIGHLHLLA---GPQLPHLALGALADKYGPLFSIRIGVHPALVVSSWEMAKELFTKHDVDISSRPKLT-V 111 (523)
Q Consensus 37 ~~pg-p~~~p~~G~~~~~~---~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~il~~~~~~~~~~~~~~-~ 111 (523)
.||| ++++|++|+...+. ...+++..+.+++++ ||+++. .+.++|++++.+++|+.+. .|++.+... .
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~ 107 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPE 107 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCH
T ss_pred CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCcccccc
Confidence 4566 44689999865421 126788899998866 999764 4689999999999999873 365543211 0
Q ss_pred c------ccccCCCcceeeCCCChhHHHHHHhHHHhcCCHHHHHHcHHHHHHHHHHHHHHHHHHhhhcccccccccchHH
Q 009899 112 G------KLLGHNYANFGFSPYNAYWREMRKITASELLSNRRLELLKHIRATEVDGEIKEIYKIWTKKKNESDQILLEMK 185 (523)
Q Consensus 112 ~------~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vdl~ 185 (523)
. ..... ..+ ++..+|+.| . +.|+ . ++.+.+.++++++.+. + .+|+.
T Consensus 108 ~~~~~~~~~~~~-~~~-l~~~dg~~H-------~-~~Ft-----~-~~~i~~~~~~ll~~~~----------g--~~Dl~ 159 (381)
T 2yjn_B 108 WMRAAGAPPAEW-AQP-FRDVHAASW-------E-GEVP-----D-VGELAESFAGLLPGAG----------A--RLDLV 159 (381)
T ss_dssp HHHHHTCCHHHH-THH-HHHHHHCCC-------C-SCCC-----C-CSCHHHHTSTTSCC------------------CC
T ss_pred cccccccccchh-hhh-hhhCCchhh-------h-hccC-----C-hHHHHHHHHHHHHhcc----------C--cchHH
Confidence 0 00001 112 234468888 3 6787 3 6677777777776653 1 57877
Q ss_pred HHH-HHHHHHHHHHHHhcccccCcccccchHHHHHHHHHHHHHhhccccccccccccccccccccccHHHHHHHHHHHHH
Q 009899 186 KWF-GDLNLNVILMMIAGKRYFGARAENDETEVRRYRAAIRNFFLLGGVFLVRDALPFLGWLDIGGYEKAMKKTAKELDS 264 (523)
Q Consensus 186 ~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~ 264 (523)
..+ ..+++++|+.+ ||.+. + +. .+ .+.+..... .+ +.. ...++. .+
T Consensus 160 ~~~a~~l~~~vi~~l-~G~~~-~-----~~----~~---~~~~~~~~~-------~~----~~~-~~~~~~---~~---- 206 (381)
T 2yjn_B 160 GDFAWQVPVQGMTAV-LGAAG-V-----LR----GA---AWDARVSLD-------AQ----LSP-QQLAVT---EA---- 206 (381)
T ss_dssp CCCCTHHHHHHHHTC-------C-----CH----HH---HHHHTTHHH-------HT----TSC-CCHHHH---HH----
T ss_pred HHHHHHHHHHHHHHH-cCCCH-H-----HH----HH---HHHHHHhcc-------CC----CCH-HHHHHH---HH----
Confidence 555 69999999995 99876 2 21 11 111111000 00 000 000000 00
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcCHHHH
Q 009899 265 LIEEWIEEHRRKKESGANLDLDFIDVLLSVLEGEGVDLSDFDVDTVIKATTMTIIVGATDTTTVNLTWALSLLLNNRREL 344 (523)
Q Consensus 265 ~~~~~i~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~ 344 (523)
.+..| +.++++.+++||+|||+.+++|++++|++||+++
T Consensus 207 ----------------------~~~~l-------------------~~~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~ 245 (381)
T 2yjn_B 207 ----------------------AVAAL-------------------PADPALRALFAGAEMTANTVVDAVLAVSAEPGLA 245 (381)
T ss_dssp ----------------------HHHHC-------------------C--CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred ----------------------HHHHH-------------------HHHHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHH
Confidence 00000 0146788999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCCChhhhcCChhHHHHHHHHhcCCCCCccccceeecccccccceeeCCCCEEEEcccccccCCCC
Q 009899 345 EKVKKELDSVVGKERLLCESDIEKLVYLQAVIKETLRLYPAGPLAGARQFTEDCTVAEYHVPKGTRLVLNLWKLQTDPRV 424 (523)
Q Consensus 345 ~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~ 424 (523)
++|++|++ |+++||+|+||++|+++. .+|.+++|++++|+.||+|+.|.++.+++|+||++
T Consensus 246 ~~l~~e~~------------------~l~~~i~E~LR~~pp~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~ 306 (381)
T 2yjn_B 246 ERIADDPA------------------AAQRTVAEVLRLHPALHL-ERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEV 306 (381)
T ss_dssp HHHHHCCC--------------------HHHHHHHHHHSCSCSE-EEEEESSCEESSSCEECTTCEEEEEHHHHTTCTTT
T ss_pred HHHhhCHH------------------HHHHHhCeeeeecCCCcc-eeEEECCCeEECCEEECCCCEEEeCHHHHcCCccc
Confidence 99999864 899999999999999996 58999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCCCCCCCCCCcccccccCCCCCCCccHHHHHHHHHHHHHHHHhhc-ceecCCCcccccCcCCCccc
Q 009899 425 WSDPLEFKPERFLTAHKDVDVKGQHFELLPFGGGRRACPGISFALQMSHLALAAFLHAF-DISTPGEAWVDMTGTAGLTN 503 (523)
Q Consensus 425 ~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~ 503 (523)
|+||++|+|+||++ ..+++||.| |.|+|+++|++|++++++.|+++| ++++.++. +.+. .+.+.
T Consensus 307 ~~dp~~F~p~R~~~-----------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~~-~~~~--~~~~~ 371 (381)
T 2yjn_B 307 FAEPDRLDVDRPDA-----------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGPV-VRRR--RSPVL 371 (381)
T ss_dssp SSSTTSCCSSCSCC-----------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----CC-EECT--TCSSS
T ss_pred CCCccccCCCCCCC-----------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCCC-cccc--cCccc
Confidence 99999999999974 247999999 999999999999999999999999 99987653 3332 23344
Q ss_pred ccCCCceEE
Q 009899 504 IRATPLEIL 512 (523)
Q Consensus 504 ~~~~~~~v~ 512 (523)
++...++|+
T Consensus 372 r~~~~LpV~ 380 (381)
T 2yjn_B 372 RGTNRCPVE 380 (381)
T ss_dssp CCEEECCCC
T ss_pred CCCccceee
Confidence 444555554
No 78
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=58.25 E-value=47 Score=23.99 Aligned_cols=57 Identities=23% Similarity=0.253 Sum_probs=42.1
Q ss_pred CCCCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEec------CeeEEEecCHHHHHHHHH
Q 009899 37 PPEAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG------VHPALVVSSWEMAKELFT 97 (523)
Q Consensus 37 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~------~~~~v~v~dp~~~~~il~ 97 (523)
.||.|...-++|++..-. ....+.++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 3 ~~~~~~~~l~V~nlp~~~----t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPYKI----TAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp CCTTCCSEEEEESCCTTC----CHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 455555566788876433 256788899999999988872 356788889999988876
No 79
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=58.22 E-value=36 Score=24.30 Aligned_cols=52 Identities=17% Similarity=0.120 Sum_probs=37.7
Q ss_pred ccccccccccCCCCchHHHHHHHHhhCCeEEEEec--------CeeEEEecCHHHHHHHHHhcc
Q 009899 45 PMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG--------VHPALVVSSWEMAKELFTKHD 100 (523)
Q Consensus 45 p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~--------~~~~v~v~dp~~~~~il~~~~ 100 (523)
-++|++..-. ..+.+.++..+||+|..+.+. |.-+|...+++.+..++..++
T Consensus 14 lfV~~Lp~~~----te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~ 73 (103)
T 1s79_A 14 VYIKGFPTDA----TLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPG 73 (103)
T ss_dssp EEEECCCTTC----CHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSC
T ss_pred EEEECCCCCC----CHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCC
Confidence 3566655332 356788889999999988764 456778889999999886433
No 80
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.34 E-value=15 Score=25.90 Aligned_cols=63 Identities=17% Similarity=0.152 Sum_probs=42.6
Q ss_pred ccccccccccCCCCchHHHHHHHHhhC-CeEEEEecCeeEEEecCHHHHHHHHHh-cccccCCCCC
Q 009899 45 PMIGHLHLLAGPQLPHLALGALADKYG-PLFSIRIGVHPALVVSSWEMAKELFTK-HDVDISSRPK 108 (523)
Q Consensus 45 p~~G~~~~~~~~~~~~~~~~~~~~kyG-~v~~i~~~~~~~v~v~dp~~~~~il~~-~~~~~~~~~~ 108 (523)
-+++|+..-.........++++..+|| .|..+ .+|+-+|...+.+.++..+.. ++..+-.++.
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~i 76 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNRI 76 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSCC
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCceE
Confidence 347777654421112234778999995 99988 679999999999999988753 4444444443
No 81
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=47.82 E-value=58 Score=21.57 Aligned_cols=39 Identities=13% Similarity=-0.023 Sum_probs=30.8
Q ss_pred hHHHHHHHHhhCCeEEEEec-------CeeEEEecCHHHHHHHHHh
Q 009899 60 HLALGALADKYGPLFSIRIG-------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 60 ~~~~~~~~~kyG~v~~i~~~-------~~~~v~v~dp~~~~~il~~ 98 (523)
.+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 21 ~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 21 KNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred HHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 46788888999999998875 3456777899999888753
No 82
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=46.03 E-value=51 Score=22.58 Aligned_cols=53 Identities=15% Similarity=0.165 Sum_probs=37.6
Q ss_pred CCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEec----CeeEEEecCHHHHHHH
Q 009899 39 EAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG----VHPALVVSSWEMAKEL 95 (523)
Q Consensus 39 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~----~~~~v~v~dp~~~~~i 95 (523)
+-|...-++|++..-. ..+.+.++..+||+|..+.+. |.-+|-..+++.++.+
T Consensus 8 ~~~~~~l~V~~Lp~~~----te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 8 HHHGSKVFVGRCTEDM----TAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp ---CCEEEEESCCTTC----CHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCCCC----CHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 3344455677776443 257788999999999999875 5667888899998853
No 83
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=44.69 E-value=38 Score=22.01 Aligned_cols=41 Identities=15% Similarity=0.114 Sum_probs=31.3
Q ss_pred hHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHhcc
Q 009899 60 HLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTKHD 100 (523)
Q Consensus 60 ~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~~~ 100 (523)
.+.+.++..+||+|..+.+. +.-+|-..+++.++..+..++
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~ 62 (75)
T 1iqt_A 13 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 62 (75)
T ss_dssp HHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSS
T ss_pred HHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCC
Confidence 56788888999999888763 234677789999999886543
No 84
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=42.39 E-value=54 Score=21.25 Aligned_cols=41 Identities=7% Similarity=0.028 Sum_probs=30.9
Q ss_pred hHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHhcc
Q 009899 60 HLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTKHD 100 (523)
Q Consensus 60 ~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~~~ 100 (523)
.+.+.++..+||+|..+.+. +.-+|-..+++.++.++..++
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~ 62 (75)
T 2mss_A 13 VEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHF 62 (75)
T ss_dssp HHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSC
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCC
Confidence 56788889999999888763 234677789999998875433
No 85
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=38.22 E-value=1.1e+02 Score=22.05 Aligned_cols=59 Identities=10% Similarity=-0.027 Sum_probs=41.3
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec--CeeEEEecCHHHHHHHHHh-cccccCCC
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG--VHPALVVSSWEMAKELFTK-HDVDISSR 106 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~--~~~~v~v~dp~~~~~il~~-~~~~~~~~ 106 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+..+
T Consensus 18 ~l~V~nLp~~~----t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr 79 (115)
T 3beg_B 18 RVVVSGLPPSG----SWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSH 79 (115)
T ss_dssp CEEEEECCSSC----CTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCCT
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECCc
Confidence 34677776433 256778889999999988874 5667888899999988763 44444433
No 86
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=38.03 E-value=60 Score=18.96 Aligned_cols=6 Identities=0% Similarity=0.263 Sum_probs=2.3
Q ss_pred HHHHhh
Q 009899 25 YYLQKW 30 (523)
Q Consensus 25 ~~~~~~ 30 (523)
.+++|+
T Consensus 33 ~~~RRR 38 (44)
T 2jwa_A 33 ILIKRR 38 (44)
T ss_dssp HHHHHH
T ss_pred hheehh
Confidence 333433
No 87
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=37.77 E-value=53 Score=20.21 Aligned_cols=6 Identities=17% Similarity=-0.081 Sum_probs=2.4
Q ss_pred HHHHhh
Q 009899 25 YYLQKW 30 (523)
Q Consensus 25 ~~~~~~ 30 (523)
+.+++.
T Consensus 31 ~~LwK~ 36 (54)
T 2knc_A 31 LAMWKV 36 (54)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 334433
No 88
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=37.11 E-value=1e+02 Score=21.34 Aligned_cols=50 Identities=20% Similarity=0.176 Sum_probs=36.4
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec---CeeEEEecCHHHHHHHHH
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---VHPALVVSSWEMAKELFT 97 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~v~v~dp~~~~~il~ 97 (523)
|-++||+..-. ..+.+.++..+||+|..+++. |.-+|-..+++.+.....
T Consensus 9 wL~VgNL~~~~----te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~ 61 (89)
T 2wbr_A 9 WLLLKNLTAQI----DGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQM 61 (89)
T ss_dssp EEEEECCCTTC----CCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred eEEEeCCCccC----CHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHH
Confidence 55677766443 257899999999999988863 445677778877766654
No 89
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=35.92 E-value=99 Score=22.32 Aligned_cols=50 Identities=18% Similarity=0.122 Sum_probs=37.2
Q ss_pred ccccccccccCCCCchHHHHHHHHhhCCeEEEEec-------CeeEEEecCHHHHHHHHHh
Q 009899 45 PMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG-------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 45 p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-------~~~~v~v~dp~~~~~il~~ 98 (523)
-++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 8 lfV~nLp~~~----te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDKSI----DNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCTTC----CHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCCCC----CHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 4667765433 367888999999999887763 2357888899999998854
No 90
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=34.21 E-value=1.2e+02 Score=21.40 Aligned_cols=51 Identities=10% Similarity=-0.075 Sum_probs=38.5
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec--CeeEEEecCHHHHHHHHHh
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG--VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~--~~~~v~v~dp~~~~~il~~ 98 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 17 ~l~V~nLp~~~----t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 17 RVVVSGLPPSG----SWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEEESCCSSC----CHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 34677766333 367788999999999988774 5677888899999988863
No 91
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=31.15 E-value=1.4e+02 Score=21.01 Aligned_cols=53 Identities=9% Similarity=-0.043 Sum_probs=38.5
Q ss_pred CccccccccccCCCC----chHHHHHHHHhhCCeEEEEec-------CeeEEEecCHHHHHHHHHh
Q 009899 44 WPMIGHLHLLAGPQL----PHLALGALADKYGPLFSIRIG-------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~----~~~~~~~~~~kyG~v~~i~~~-------~~~~v~v~dp~~~~~il~~ 98 (523)
.-++|++..-. .. ..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 17 ~l~V~nLp~~~--~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 17 VIVVDNVPQVG--PDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp EEEEESCCCCC--TTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred EEEEeCCCcch--hhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 45678776433 21 346788889999999998875 4557778899988887764
No 92
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.33 E-value=1.1e+02 Score=20.23 Aligned_cols=50 Identities=20% Similarity=0.048 Sum_probs=35.6
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHH
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFT 97 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~ 97 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++.++.
T Consensus 7 ~l~v~nlp~~~----t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 7 GLYIRGLQPGT----TDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp EEEEESCCTTC----CHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 44667765433 256777888899999888753 235677889999888875
No 93
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=30.23 E-value=1.4e+02 Score=21.41 Aligned_cols=51 Identities=20% Similarity=0.118 Sum_probs=37.6
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHh
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~ 98 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 8 ~lfV~nL~~~~----te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 8 EVTFARLNDNV----RETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEEEESCCTTC----CHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCCC----CHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 34677765433 367888999999999988762 2347888899999998763
No 94
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=30.21 E-value=1.4e+02 Score=20.70 Aligned_cols=47 Identities=17% Similarity=0.114 Sum_probs=34.1
Q ss_pred hHHHHHHHHhhCCeEEEEec----CeeEEEecCHHHHHHHHHh-cccccCCC
Q 009899 60 HLALGALADKYGPLFSIRIG----VHPALVVSSWEMAKELFTK-HDVDISSR 106 (523)
Q Consensus 60 ~~~~~~~~~kyG~v~~i~~~----~~~~v~v~dp~~~~~il~~-~~~~~~~~ 106 (523)
.+.+.++..+||+|..+.+. +.-+|-..+++.+...+.. ++..+..+
T Consensus 14 ~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 65 (101)
T 2hvz_A 14 KGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGS 65 (101)
T ss_dssp HHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHHHHHSCSSSC
T ss_pred HHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHHHCCCeECCc
Confidence 56788899999999887763 4557778899999998863 33334333
No 95
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=29.79 E-value=43 Score=15.99 Aligned_cols=12 Identities=33% Similarity=0.490 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHH
Q 009899 342 RELEKVKKELDS 353 (523)
Q Consensus 342 ~~~~~l~~Ei~~ 353 (523)
..|.++|.|+.+
T Consensus 8 nlqkkirkelkq 19 (26)
T 1m46_B 8 NLQKKIRKELKQ 19 (26)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 468899999874
No 96
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=29.61 E-value=1.4e+02 Score=20.78 Aligned_cols=50 Identities=12% Similarity=0.148 Sum_probs=36.1
Q ss_pred ccccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHh
Q 009899 45 PMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 45 p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~ 98 (523)
-++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.+..++..
T Consensus 26 l~V~nlp~~~----t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 26 LFVTGVHEEA----TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEEECCCTTC----CHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCCCC----CHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 3566665432 356788899999999888763 3346777899999988863
No 97
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=29.36 E-value=1.4e+02 Score=20.56 Aligned_cols=55 Identities=9% Similarity=-0.002 Sum_probs=36.9
Q ss_pred CCCCCCccccccccccCCCCchHHHHHHHHhhCCeEE--------EEec---------CeeEEEecCHHHHHHHHH
Q 009899 39 EAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFS--------IRIG---------VHPALVVSSWEMAKELFT 97 (523)
Q Consensus 39 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~--------i~~~---------~~~~v~v~dp~~~~~il~ 97 (523)
|.|...-++|++..-. ..+.+.++..+||.|.. +.+. |.-+|-..+++.++..+.
T Consensus 10 ~~~~~~l~V~nLp~~~----t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~ 81 (99)
T 2la6_A 10 HSDNNTIFVQGLGENV----TIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAID 81 (99)
T ss_dssp CCCCSEEEEECCCSSC----CHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCC----CHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHH
Confidence 3333445677765433 25678889999998876 5442 234677789999988875
No 98
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=29.01 E-value=1.5e+02 Score=20.67 Aligned_cols=49 Identities=12% Similarity=0.007 Sum_probs=35.2
Q ss_pred cccccccccCCCCchHHHHHHHHhhCCeEEEEecC---------eeEEEecCHHHHHHHHHh
Q 009899 46 MIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGV---------HPALVVSSWEMAKELFTK 98 (523)
Q Consensus 46 ~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~---------~~~v~v~dp~~~~~il~~ 98 (523)
++||+..-. ..+.+.++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 23 fV~nLp~~~----te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 23 IVNYLPQNM----TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEESCCTTC----CHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC----CHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 566665433 3577888999999998887631 235777899999888753
No 99
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=28.67 E-value=1.3e+02 Score=20.95 Aligned_cols=51 Identities=14% Similarity=0.041 Sum_probs=37.0
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec--------CeeEEEecCHHHHHHHHHh
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG--------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~--------~~~~v~v~dp~~~~~il~~ 98 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 17 ~l~v~nLp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 75 (105)
T 2dnh_A 17 KLFVGMLNKQQ----SEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHA 75 (105)
T ss_dssp EEEEESCCTTC----CHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 44677765433 256788899999999888764 3346777899999988763
No 100
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.91 E-value=1.7e+02 Score=20.94 Aligned_cols=51 Identities=12% Similarity=0.089 Sum_probs=38.7
Q ss_pred CCccccccccccCCCCchHHHHHHHHhhCCeEEEEec---CeeEEEecCHHHHHHHHH
Q 009899 43 KWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---VHPALVVSSWEMAKELFT 97 (523)
Q Consensus 43 ~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~v~v~dp~~~~~il~ 97 (523)
.--++|++..-. ..+.+.++..+||.|..+.+. +.-+|-..+++.+.....
T Consensus 17 ~~LfV~nLp~~v----te~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 17 RVIHIRKLPIDV----TEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CEEEECSCCTTS----CHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 345677776433 256788999999999988874 456788889998888776
No 101
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.90 E-value=1.5e+02 Score=20.33 Aligned_cols=51 Identities=18% Similarity=0.116 Sum_probs=36.6
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec------------CeeEEEecCHHHHHHHHHh
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG------------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~------------~~~~v~v~dp~~~~~il~~ 98 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 7 ~l~V~nLp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 7 GLFIKNLNFST----TEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp CEEEESCCTTC----CHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 34566665433 256788889999999887764 2346777899999998874
No 102
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=27.73 E-value=2.1e+02 Score=22.47 Aligned_cols=49 Identities=14% Similarity=0.096 Sum_probs=36.2
Q ss_pred cccccccccCCCCchHHHHHHHHhhCCeEEEEec-----CeeEEEecCHHHHHHHHHh
Q 009899 46 MIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG-----VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 46 ~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-----~~~~v~v~dp~~~~~il~~ 98 (523)
++||+..-. ..+.+.++..+||.|.++++. +.-+|-..|.+.++.....
T Consensus 50 ~VgNL~~~v----ted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 50 IVENLFYPV----TLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EECSCCSCC----CHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEeCcCCCC----CHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 477775332 357788999999999888873 2457788899988887753
No 103
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.70 E-value=1.2e+02 Score=21.06 Aligned_cols=56 Identities=13% Similarity=0.099 Sum_probs=39.4
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHh-ccccc
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTK-HDVDI 103 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~-~~~~~ 103 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+
T Consensus 15 ~l~V~nLp~~~----t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~ 80 (103)
T 2dnm_A 15 TLKVDNLTYRT----SPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAEL 80 (103)
T ss_dssp EEEEESCCTTC----CHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHHHSSCCB
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHHcCCCEE
Confidence 44677765433 256788899999999988874 2456778899999888863 43333
No 104
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.30 E-value=1.5e+02 Score=20.12 Aligned_cols=56 Identities=20% Similarity=0.162 Sum_probs=38.8
Q ss_pred CCCCCCccccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHh
Q 009899 39 EAAGKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 39 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~ 98 (523)
|.|...-++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 12 ~~~~~~l~v~nlp~~~----t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 12 PDPNCCLGVFGLSLYT----TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CCGGGCEEEESCCSSC----CHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCC----CHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3333455677765433 256788899999999888763 1346777899999988863
No 105
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=27.22 E-value=1.5e+02 Score=20.26 Aligned_cols=51 Identities=18% Similarity=0.219 Sum_probs=38.0
Q ss_pred Ccccccccc-ccCCCCchHHHHHHHHhhCCeEEEEe-cCeeEEEecCHHHHHHHHHh
Q 009899 44 WPMIGHLHL-LAGPQLPHLALGALADKYGPLFSIRI-GVHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 44 ~p~~G~~~~-~~~~~~~~~~~~~~~~kyG~v~~i~~-~~~~~v~v~dp~~~~~il~~ 98 (523)
--++|++.. -. ..+.+.++..+||+|..+.+ -+.-+|-..+++.+...+..
T Consensus 12 ~l~V~nlp~~~~----t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~ 64 (96)
T 2kvi_A 12 RLFIGNLPLKNV----SKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEC 64 (96)
T ss_dssp EEEEESSTTSCC----CHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCcccC----CHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 346677664 33 25678889999999988876 35567888899999998874
No 106
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.05 E-value=1.6e+02 Score=20.43 Aligned_cols=50 Identities=14% Similarity=0.036 Sum_probs=37.0
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec-------CeeEEEecCHHHHHHHHH
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG-------VHPALVVSSWEMAKELFT 97 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-------~~~~v~v~dp~~~~~il~ 97 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.+..++.
T Consensus 17 ~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 17 TLYVGNLSRDV----TEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp EEEEESCCTTC----CHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCccC----CHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 44677765433 357788899999999888763 245677889999988876
No 107
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.01 E-value=1.7e+02 Score=20.84 Aligned_cols=57 Identities=9% Similarity=0.035 Sum_probs=38.9
Q ss_pred cccccccccCCCCchHHHHHHHHhhCCeEEEEec---CeeEEEecCHHHHHHHHHh-cccccCCC
Q 009899 46 MIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---VHPALVVSSWEMAKELFTK-HDVDISSR 106 (523)
Q Consensus 46 ~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~v~v~dp~~~~~il~~-~~~~~~~~ 106 (523)
++|++..- -..+.+.++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+..+
T Consensus 14 ~V~nLp~~----~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 74 (111)
T 1whx_A 14 LAKNLPAG----TLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHV 74 (111)
T ss_dssp EEESCCTT----CCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSS
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCe
Confidence 45555432 2366788899999999998873 3457778899999887753 34344433
No 108
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=26.73 E-value=1.4e+02 Score=19.83 Aligned_cols=52 Identities=12% Similarity=0.146 Sum_probs=37.0
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHhc
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTKH 99 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~~ 99 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++..+...
T Consensus 13 ~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 73 (87)
T 3s7r_A 13 KMFVGGLSWDT----SKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 73 (87)
T ss_dssp EEEEECCCTTC----CHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSS
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhC
Confidence 44677765433 357788899999999888763 23467777999998888653
No 109
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=26.70 E-value=1.1e+02 Score=18.84 Aligned_cols=7 Identities=29% Similarity=0.074 Sum_probs=2.7
Q ss_pred HHHHHhh
Q 009899 24 FYYLQKW 30 (523)
Q Consensus 24 ~~~~~~~ 30 (523)
.+.+++.
T Consensus 27 i~~LwK~ 33 (54)
T 2l8s_A 27 ILALWKI 33 (54)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 3334433
No 110
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=26.65 E-value=1.7e+02 Score=20.61 Aligned_cols=50 Identities=12% Similarity=0.059 Sum_probs=36.9
Q ss_pred ccccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHh
Q 009899 45 PMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 45 p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~ 98 (523)
-++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 29 l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 87 (110)
T 1oo0_B 29 LFVTSIHEEA----QEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 87 (110)
T ss_dssp EEEESCCTTC----CHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 4566665432 256788899999999998874 3457778899999988763
No 111
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=26.36 E-value=1.2e+02 Score=22.14 Aligned_cols=41 Identities=12% Similarity=0.029 Sum_probs=31.1
Q ss_pred hHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHhcc
Q 009899 60 HLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTKHD 100 (523)
Q Consensus 60 ~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~~~ 100 (523)
.+.+.++..+||+|..+.+. +.-+|-..+.+.++..+.-++
T Consensus 50 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~g 99 (124)
T 2jwn_A 50 AQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDE 99 (124)
T ss_dssp HHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTTT
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcCC
Confidence 67788899999999887763 234677889999998884333
No 112
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=25.68 E-value=1.6e+02 Score=19.97 Aligned_cols=50 Identities=18% Similarity=0.096 Sum_probs=36.2
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec--------CeeEEEecCHHHHHHHHH
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG--------VHPALVVSSWEMAKELFT 97 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~--------~~~~v~v~dp~~~~~il~ 97 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++.++.
T Consensus 18 ~l~v~nlp~~~----~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 18 TVFVGNLEARV----REEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp EEEEECCCTTC----CHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred EEEEECCCCCC----CHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 44566665433 357788999999999888763 234677789999988876
No 113
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.40 E-value=1.7e+02 Score=20.08 Aligned_cols=50 Identities=8% Similarity=0.077 Sum_probs=35.6
Q ss_pred CccccccccccCCCCchHHHH----HHHHhhCCeEEEEec------CeeEEEecCHHHHHHHHH
Q 009899 44 WPMIGHLHLLAGPQLPHLALG----ALADKYGPLFSIRIG------VHPALVVSSWEMAKELFT 97 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~----~~~~kyG~v~~i~~~------~~~~v~v~dp~~~~~il~ 97 (523)
--++|++..-. ..+.+. ++..+||+|..+.+. +.-+|-..+++.++..+.
T Consensus 11 ~l~V~nL~~~~----~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~ 70 (96)
T 2dgx_A 11 DVQVSNIDYRL----SRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVN 70 (96)
T ss_dssp EEEEESCCTTS----CHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHH
T ss_pred EEEEECCCCCC----CHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHH
Confidence 34667766433 234555 888999999998874 345677789999988876
No 114
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.26 E-value=1.8e+02 Score=20.57 Aligned_cols=55 Identities=13% Similarity=0.033 Sum_probs=40.4
Q ss_pred CCCCCCcccccccc-ccCCCCchHHHHHHHHhhCCeEEEEec---CeeEEEecCHHHHHHHHH
Q 009899 39 EAAGKWPMIGHLHL-LAGPQLPHLALGALADKYGPLFSIRIG---VHPALVVSSWEMAKELFT 97 (523)
Q Consensus 39 pgp~~~p~~G~~~~-~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~v~v~dp~~~~~il~ 97 (523)
+.|...-++|++.. -. ..+.+.++..+||.|..+++. +.-+|-..+.+.+.....
T Consensus 12 ~~p~~~l~V~nLp~~~~----te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 12 VETRRVVHIMDFQRGKN----LRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp CCCCCEEEEESCCCSSS----HHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCcC----CHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 33444567788765 32 246788889999999999875 345788889999988775
No 115
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.00 E-value=1.6e+02 Score=19.89 Aligned_cols=58 Identities=16% Similarity=0.220 Sum_probs=39.8
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEecC---------eeEEEecCHHHHHHHHHh-cccccCC
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGV---------HPALVVSSWEMAKELFTK-HDVDISS 105 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~---------~~~v~v~dp~~~~~il~~-~~~~~~~ 105 (523)
--++|++..-. ..+.+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+..
T Consensus 7 ~l~v~nlp~~~----t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 74 (95)
T 2dnz_A 7 GLYVGSLHFNI----TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG 74 (95)
T ss_dssp EEEEESCCTTC----CHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHHHTTCCSSS
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHhCCCeeCC
Confidence 44567765433 2567888999999998887632 456778899999998863 4433433
No 116
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=24.81 E-value=1.8e+02 Score=20.22 Aligned_cols=51 Identities=10% Similarity=0.022 Sum_probs=37.8
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec-CeeEEEecCHHHHHHHHHh
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG-VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-~~~~v~v~dp~~~~~il~~ 98 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 13 ~l~V~nl~~~~----t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 13 VLFVRNLANTV----TEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp CEEEECCCTTC----CHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHH
Confidence 44667765433 257788899999999988874 4456777899999988863
No 117
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.61 E-value=1.8e+02 Score=20.18 Aligned_cols=56 Identities=13% Similarity=-0.067 Sum_probs=39.4
Q ss_pred CCCCCCccccccccccCCCCchHHHHHHHHh-hCCeEEEEec--------CeeEEEecCHHHHHHHHHh
Q 009899 39 EAAGKWPMIGHLHLLAGPQLPHLALGALADK-YGPLFSIRIG--------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 39 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~k-yG~v~~i~~~--------~~~~v~v~dp~~~~~il~~ 98 (523)
+.|..--++|++..-. ..+.+.++..+ ||+|..+.+. +.-+|-..+++.+...+..
T Consensus 6 ~~~~~~l~V~nLp~~~----t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 6 SGPEYSLFVGDLTPDV----DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp SSCCCCEEEECCCTTC----CHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCCC----CHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 3444455777776443 25678888888 9999888762 2346777899999998863
No 118
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=24.33 E-value=2.2e+02 Score=21.05 Aligned_cols=52 Identities=21% Similarity=0.175 Sum_probs=38.0
Q ss_pred CCccccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHh
Q 009899 43 KWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 43 ~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~ 98 (523)
..-++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 47 ~~l~V~nLp~~~----te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 47 CCLGVFGLSLYT----TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp SCBCEETCTTSC----CHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 355677765433 256788899999999988873 2456777899999998863
No 119
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.02 E-value=1.8e+02 Score=19.94 Aligned_cols=51 Identities=18% Similarity=0.189 Sum_probs=36.8
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHh
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~ 98 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 10 ~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 10 RLFVRNLSYTS----SEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp EEEEECCCTTC----CHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 33566665332 256788899999999988873 3456778899999998843
No 120
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.65 E-value=1.9e+02 Score=20.28 Aligned_cols=51 Identities=14% Similarity=0.075 Sum_probs=37.6
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec---CeeEEEecCHHHHHHHHHh
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~v~v~dp~~~~~il~~ 98 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.+..++..
T Consensus 27 ~l~V~nl~~~~----t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~ 80 (109)
T 1x4g_A 27 TVYCGGIASGL----TDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVS 80 (109)
T ss_dssp EEEEECCSSCC----CHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 34567765433 256788889999999988873 5567888899999888753
No 121
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=23.52 E-value=2.1e+02 Score=20.71 Aligned_cols=57 Identities=12% Similarity=0.154 Sum_probs=39.9
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHh-cccccC
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTK-HDVDIS 104 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~-~~~~~~ 104 (523)
.-++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.+..++.. ++..+.
T Consensus 24 ~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~ 90 (126)
T 3ex7_B 24 ILFVTGVHEEA----TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLM 90 (126)
T ss_dssp EEEEESCCTTC----CHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSS
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeC
Confidence 34566665332 356788889999999988873 3457888899999998853 444443
No 122
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.24 E-value=1.3e+02 Score=21.50 Aligned_cols=50 Identities=10% Similarity=-0.057 Sum_probs=35.0
Q ss_pred cccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHhc
Q 009899 46 MIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTKH 99 (523)
Q Consensus 46 ~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~~ 99 (523)
++|++..-. ..+.+.++..+||.|..+.+. +.-+|-..+++.++.++.-+
T Consensus 29 ~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~ 87 (114)
T 2cq4_A 29 FCMQLAARI----RPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLT 87 (114)
T ss_dssp EEESCCTTC----CHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHT
T ss_pred EEeCCCCCC----CHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcC
Confidence 456654332 356788899999999988874 23467778888888877433
No 123
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=22.88 E-value=1.7e+02 Score=21.68 Aligned_cols=55 Identities=18% Similarity=0.176 Sum_probs=35.4
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec------CeeEEEecCHHHHHHHHHh
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~------~~~~v~v~dp~~~~~il~~ 98 (523)
--++|++..-.........+.++..+||+|..+.+. |.-+|...+++.+...+..
T Consensus 31 ~LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 31 VVLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 346677654321011112355788999999888773 3567888899998888753
No 124
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=22.65 E-value=1.9e+02 Score=20.52 Aligned_cols=52 Identities=10% Similarity=0.063 Sum_probs=38.1
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHhc
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTKH 99 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~~ 99 (523)
--++|++..-. ..+.+.++..+||+|..+.+. |.-+|-..+++.++.++...
T Consensus 27 ~lfV~nLp~~~----te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~ 87 (109)
T 2rs2_A 27 KMFIGGLSWQT----TQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 87 (109)
T ss_dssp CEEEESCCTTC----CHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSS
T ss_pred EEEEeCCCCCC----CHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHC
Confidence 44677765332 256788899999999888873 24578888999999988654
No 125
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.58 E-value=1.9e+02 Score=19.76 Aligned_cols=50 Identities=8% Similarity=0.050 Sum_probs=37.0
Q ss_pred CCccccccccccCCCCchHHHHHHHHhhCCeEEEEec---CeeEEEecCHHHHHHHHHh
Q 009899 43 KWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 43 ~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~v~v~dp~~~~~il~~ 98 (523)
.--++|++ .. ..+.+.++..+||+|..+.++ +.-+|-..+++.+...+..
T Consensus 16 ~~l~V~n~-~~-----t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 16 NTLYVYGE-DM-----TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp SEEEEECS-SC-----CHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CEEEEcCC-CC-----CHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 34467773 22 257788999999999998875 4556777899999988854
No 126
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=22.22 E-value=1.8e+02 Score=19.46 Aligned_cols=51 Identities=14% Similarity=0.016 Sum_probs=36.4
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec-------CeeEEEecCHHHHHHHHHh
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG-------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-------~~~~v~v~dp~~~~~il~~ 98 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 10 ~l~V~nlp~~~----t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 10 QIFVRNLPFDF----TWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EEEECSCCTTC----CHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 34567665332 357788899999999888763 2346777899999988763
No 127
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.03 E-value=2.4e+02 Score=20.67 Aligned_cols=52 Identities=12% Similarity=0.090 Sum_probs=38.6
Q ss_pred CCCccccccccccCCCCchHHHHHHHHhhCCeEEEEec---CeeEEEecCHHHHHHHHH
Q 009899 42 GKWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---VHPALVVSSWEMAKELFT 97 (523)
Q Consensus 42 ~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~v~v~dp~~~~~il~ 97 (523)
...-++|++..-. ..+.+.++..+||.|..+.+. +.-+|-..+.+.+...+.
T Consensus 31 s~~LfVgNLp~~v----te~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 31 SRVIHIRKLPIDV----TEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp CSEEEEESCCTTC----CHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred CCEEEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 3345778876433 256788999999999888764 456778889998888775
No 128
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=21.90 E-value=1.8e+02 Score=21.20 Aligned_cols=49 Identities=8% Similarity=0.046 Sum_probs=35.9
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec---CeeEEEecCHHHHHHHHHh
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~v~v~dp~~~~~il~~ 98 (523)
--++|++ . -..+.+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 41 ~lfVgnl-~-----~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~ 92 (121)
T 2bz2_A 41 TLYVYGE-D-----MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 92 (121)
T ss_dssp EEEEECS-S-----CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred EEEEcCC-C-----CCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 4467772 2 2267888999999999887764 4567778899999888753
No 129
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.88 E-value=2e+02 Score=19.71 Aligned_cols=57 Identities=12% Similarity=0.068 Sum_probs=40.2
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHhcccccC
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTKHDVDIS 104 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~~~~~~~ 104 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++.++..++..+.
T Consensus 12 ~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~ 77 (99)
T 2dgs_A 12 KIFVGGIPHNC----GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIM 77 (99)
T ss_dssp EEEEESCCSSC----CHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSS
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEEC
Confidence 44667765433 256788899999999988873 3456778899999998875444443
No 130
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=21.48 E-value=1.9e+02 Score=19.23 Aligned_cols=41 Identities=15% Similarity=0.050 Sum_probs=30.4
Q ss_pred hHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHhcc
Q 009899 60 HLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTKHD 100 (523)
Q Consensus 60 ~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~~~ 100 (523)
.+.+.++..+||+|..+.+. +.-+|-..+++.++.++.-++
T Consensus 20 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~g 69 (89)
T 3ucg_A 20 AEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDE 69 (89)
T ss_dssp HHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGGGTT
T ss_pred HHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHhcCC
Confidence 56788889999999887763 134677789999888874333
No 131
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.44 E-value=2.1e+02 Score=19.79 Aligned_cols=52 Identities=12% Similarity=0.095 Sum_probs=38.0
Q ss_pred CCccccccccccCCCCchHHHHHHHHhhCCeEEEEec-------CeeEEEecCHHHHHHHHHh
Q 009899 43 KWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG-------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 43 ~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-------~~~~v~v~dp~~~~~il~~ 98 (523)
.--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 16 ~~l~V~nlp~~~----t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 16 KRLHVSNIPFRF----RDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp CEEEEESCCTTC----CHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 344677765433 256788889999999888773 3457778899999998863
No 132
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.41 E-value=2.1e+02 Score=19.78 Aligned_cols=49 Identities=18% Similarity=0.186 Sum_probs=34.5
Q ss_pred cccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHh
Q 009899 46 MIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 46 ~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~ 98 (523)
++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 12 ~V~nlp~~~----~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 69 (104)
T 1p1t_A 12 FVGNIPYEA----TEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69 (104)
T ss_dssp EEESCCTTS----CHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHH
T ss_pred EEeCCCCcC----CHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 556655322 356788889999998777653 2346777899999998863
No 133
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=21.36 E-value=2.1e+02 Score=20.24 Aligned_cols=49 Identities=14% Similarity=0.226 Sum_probs=36.1
Q ss_pred cccccccccCCCCchHHHHHHHHhhCCeEEEEe-cCeeEEEecCHHHHHHHHHh
Q 009899 46 MIGHLHLLAGPQLPHLALGALADKYGPLFSIRI-GVHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 46 ~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~-~~~~~v~v~dp~~~~~il~~ 98 (523)
++|++..-. ..+.+.++..+||+|..+.+ -+.-+|-..+.+.+...+..
T Consensus 35 ~V~nLp~~~----t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~ 84 (108)
T 2jvo_A 35 FVRPFPLDV----QESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEE 84 (108)
T ss_dssp EECSSCTTC----CHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHH
T ss_pred EEECCCCCC----CHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 566654332 25678889999999988776 45567778899999988763
No 134
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.24 E-value=2.2e+02 Score=19.98 Aligned_cols=40 Identities=15% Similarity=0.197 Sum_probs=32.5
Q ss_pred chHHHHHHHHhhCCeEEEEec----CeeEEEecCHHHHHHHHHh
Q 009899 59 PHLALGALADKYGPLFSIRIG----VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 59 ~~~~~~~~~~kyG~v~~i~~~----~~~~v~v~dp~~~~~il~~ 98 (523)
..+.+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 30 te~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 30 SKDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp CHHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 357888999999999988874 3457788899999988875
No 135
>1u6f_A Tcubp1, RNA-binding protein UBP1; trypanosome, mRNA-binding protein, GU-rich RNA, structure; NMR {Trypanosoma cruzi} SCOP: d.58.7.1
Probab=20.95 E-value=2.3e+02 Score=21.00 Aligned_cols=49 Identities=20% Similarity=0.263 Sum_probs=35.1
Q ss_pred cccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHh
Q 009899 46 MIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 46 ~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~ 98 (523)
++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.+..++..
T Consensus 46 ~V~nLp~~~----~~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 103 (139)
T 1u6f_A 46 MVNYIPTTV----DEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAG 103 (139)
T ss_dssp EEESCSTTC----CHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 456654322 356788899999999888763 2346777899999998864
No 136
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.95 E-value=2e+02 Score=19.38 Aligned_cols=51 Identities=14% Similarity=0.118 Sum_probs=37.5
Q ss_pred CCccccccccccCCCCchHHHHHHHHhhCCeEEEEecC---------eeEEEecCHHHHHHHHH
Q 009899 43 KWPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGV---------HPALVVSSWEMAKELFT 97 (523)
Q Consensus 43 ~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~---------~~~v~v~dp~~~~~il~ 97 (523)
..-++|++..-. ..+.+.++..+||+|..+.+.. .-+|-..+++.++..+.
T Consensus 17 ~~l~V~nlp~~~----t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 76 (94)
T 2e5h_A 17 STVYVSNLPFSL----TNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTR 76 (94)
T ss_dssp TSEEEESCCTTS----CHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCCCC----CHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHH
Confidence 355677776333 3567888899999999888732 35777889999998885
No 137
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=20.88 E-value=1.9e+02 Score=21.67 Aligned_cols=50 Identities=14% Similarity=0.065 Sum_probs=36.8
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEecC-----eeEEEecCHHHHHHHHH
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIGV-----HPALVVSSWEMAKELFT 97 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~-----~~~v~v~dp~~~~~il~ 97 (523)
.-++||+..-. ..+.++++..+||.|.++.+.. +-+|-..|++.++....
T Consensus 30 ~I~V~NL~~~v----te~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~ 84 (130)
T 3zzy_A 30 RIIVENLFYPV----TLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 84 (130)
T ss_dssp EEEEESCCSCC----CHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHH
T ss_pred EEEECCCCCCC----CHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHH
Confidence 44588875332 3678899999999998887743 35788889988888765
No 138
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.75 E-value=91 Score=22.31 Aligned_cols=56 Identities=13% Similarity=0.069 Sum_probs=38.0
Q ss_pred CccccccccccCCCCchHHHH---HHHHhhCCeEEEEec------------CeeEEEecCHHHHHHHHHh-ccccc
Q 009899 44 WPMIGHLHLLAGPQLPHLALG---ALADKYGPLFSIRIG------------VHPALVVSSWEMAKELFTK-HDVDI 103 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~---~~~~kyG~v~~i~~~------------~~~~v~v~dp~~~~~il~~-~~~~~ 103 (523)
.-++|++..-. ..+.+. ++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+
T Consensus 17 ~l~V~nLp~~~----~~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~ 88 (111)
T 2cpi_A 17 LVFVVGLSQRL----ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVV 88 (111)
T ss_dssp CEEEEEECTTT----CCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEE
T ss_pred EEEEECCCCCC----CHHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHHhCCCEE
Confidence 44677766443 235566 788899999888764 2456777899999988875 44333
No 139
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=20.36 E-value=1.9e+02 Score=18.86 Aligned_cols=39 Identities=10% Similarity=-0.000 Sum_probs=30.3
Q ss_pred hHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHh
Q 009899 60 HLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 60 ~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~ 98 (523)
.+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 15 ~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 15 DETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp HHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 56788888999999887763 2347778899999988863
No 140
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=20.26 E-value=1.9e+02 Score=19.01 Aligned_cols=50 Identities=14% Similarity=0.067 Sum_probs=35.6
Q ss_pred ccccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHHh
Q 009899 45 PMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFTK 98 (523)
Q Consensus 45 p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~~ 98 (523)
-++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 9 l~v~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 9 VFVGDLSPEI----TTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEEESCCTTC----CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCC----CHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3566665332 356788889999999888763 2346777899999988864
No 141
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=20.20 E-value=2.4e+02 Score=19.93 Aligned_cols=50 Identities=22% Similarity=0.237 Sum_probs=36.4
Q ss_pred CccccccccccCCCCchHHHHHHHHhhCCeEEEEec---------CeeEEEecCHHHHHHHHH
Q 009899 44 WPMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG---------VHPALVVSSWEMAKELFT 97 (523)
Q Consensus 44 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~il~ 97 (523)
--++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.+..++.
T Consensus 28 ~l~V~nLp~~~----te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~ 86 (108)
T 2jrs_A 28 RLYVGSLHFNI----TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 86 (108)
T ss_dssp EEEEECCCSSC----CHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 34667765432 356788899999999887763 245677889999999886
No 142
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=20.11 E-value=1.9e+02 Score=20.74 Aligned_cols=56 Identities=18% Similarity=0.135 Sum_probs=38.7
Q ss_pred ccccccccccCCCCchHHHHHHHHhhCCeEEEEec--------CeeEEEecCHHHHHHHHHh-cccccC
Q 009899 45 PMIGHLHLLAGPQLPHLALGALADKYGPLFSIRIG--------VHPALVVSSWEMAKELFTK-HDVDIS 104 (523)
Q Consensus 45 p~~G~~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~--------~~~~v~v~dp~~~~~il~~-~~~~~~ 104 (523)
-++|++..-. ..+.+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.
T Consensus 10 l~V~nLp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~~~ 74 (116)
T 2fy1_A 10 LFIGGLNRET----NEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLH 74 (116)
T ss_dssp EEEECCTTTC----CHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHHCSSCBCS
T ss_pred EEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHHhCCCEEC
Confidence 3566665332 256788899999999887763 3457778899999998864 333343
Done!