BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 009901
         (523 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8W234|SEUSS_ARATH Transcriptional corepressor SEUSS OS=Arabidopsis thaliana GN=SEU
           PE=1 SV=1
          Length = 877

 Score =  447 bits (1151), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 334/537 (62%), Positives = 376/537 (70%), Gaps = 64/537 (11%)

Query: 7   EATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRD 66
           EAT EVLPRLFKIKYESGTLEELLYVDMPRE QN+SGQIVL+YAKA QESVFE LRVVRD
Sbjct: 379 EATAEVLPRLFKIKYESGTLEELLYVDMPRESQNSSGQIVLEYAKATQESVFEHLRVVRD 438

Query: 67  GQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAP 126
           GQLRIVFSPDLKI SWEFCARRHEELIPRRLLIPQVSQLG+AAQKYQ A QNA+++ + P
Sbjct: 439 GQLRIVFSPDLKIFSWEFCARRHEELIPRRLLIPQVSQLGSAAQKYQQAAQNATTDSALP 498

Query: 127 ELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTG 186
           ELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSR T TG
Sbjct: 499 ELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTG 558

Query: 187 PMESLAKFPRRTSGASGFHSPS-QQPEDQLQ-----------------QQQQQQQTVGQN 228
           P+ESLAKFPRRT  +S    PS QQ  DQL+                 QQQQQQQTV QN
Sbjct: 559 PIESLAKFPRRTGPSSALPGPSPQQASDQLRQQQQQQQQQQQQQQQQQQQQQQQQTVSQN 618

Query: 229 SNSE-SSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNN- 286
           +NS+ SS Q   MQ   SNG   VN + N ASAS++ S+I GL+HQNSM  R QN   N 
Sbjct: 619 TNSDQSSRQVALMQGNPSNG---VNYAFNAASASTSTSSIAGLIHQNSMKGRHQNAAYNP 675

Query: 287 ASSPYGGSSVQMPSPGSSNNI----PQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHM 342
            +SPYGG+SVQM SP SS  +     Q Q N   FQSPT SS+NN    S + + + NHM
Sbjct: 676 PNSPYGGNSVQMQSPSSSGTMVPSSSQQQHNLPTFQSPTSSSNNN--NPSQNGIPSVNHM 733

Query: 343 SSASSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGG 402
            S +SPA   +QQ   +GE D           +  S+VQKIL+E+++ +  +  S  GG 
Sbjct: 734 GSTNSPA---MQQ---AGEVD----------GNESSSVQKILNEILMNNQAHNNS-SGGS 776

Query: 403 MVGVGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSA 462
           MVG GS GND K   ++ ++G          L+ NG VNNN     GG G  GGG+GQS 
Sbjct: 777 MVGHGSFGNDGKGQANVNSSGV---------LLMNGQVNNNNNTNIGGAGGFGGGIGQSM 827

Query: 463 MVNGIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDW 519
             NGI    GNNS+MNGRVGM  M RD   N QQDLGNQL   LGAVNGFNN  FDW
Sbjct: 828 AANGINNINGNNSLMNGRVGM--MVRDP--NGQQDLGNQL---LGAVNGFNN--FDW 875


>sp|O74364|ADN1_SCHPO Adhesion defective protein 1 OS=Schizosaccharomyces pombe (strain
           972 / ATCC 24843) GN=adn1 PE=3 SV=1
          Length = 391

 Score = 46.6 bits (109), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)

Query: 5   VAEATVEVLPRLFKIKYESGTLEELLYV-DMPREYQNASGQIVLDYAKAIQESVFEQ--- 60
           + E +   LPR   + Y  G L+++ ++    +E+   +    ++ ++A   S+  Q   
Sbjct: 76  LFELSYAALPRFLYLSY-CGKLKKMSFLLGNTKEFAIPNNGYFVESSRA---SILYQYQG 131

Query: 61  -LRVVRDGQLRIVF--SPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAATQ 117
            ++V+  G LR  F  +P LK+ S EF A  H E + R L+    S   + ++  Q   Q
Sbjct: 132 GVQVIVSGHLRAHFFRAPLLKLDSLEFSAVGHSEYLLRELMT-NASLALSQSRPPQNQIQ 190

Query: 118 NASSNLSAPELQN-NCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDL 176
           +       P  ++ N N   +             VN+ G     +R ++I+E ++ M+DL
Sbjct: 191 HDGVKSEDPSSESVNINSSSSLLPDSP-------VNEYGLEPHIMRFMEITETISGMRDL 243

Query: 177 IDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTVGQN 228
           I ++    +GP  +L KF                    LQQQ Q Q++   N
Sbjct: 244 IAFTLAQRSGPTSALHKF-----------------ATALQQQHQMQKSTSSN 278


>sp|P48383|SAK1_SCHPO Protein sak1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=sak1 PE=1 SV=2
          Length = 766

 Score = 38.1 bits (87), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 24/127 (18%)

Query: 246 NGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSN 305
           + + N N  +  + AS  A+ IV           +++ V  +S PY      +P  GS  
Sbjct: 212 SSIQNTNQRVESSPASVNAAAIV-----------RKSAVTPSSDPYNSPPPSIPLLGSQT 260

Query: 306 NI--------PQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSASSPANISVQQPA 357
           N+        PQA P PS       S SN PPQ SHS++ +     S S P   S   P 
Sbjct: 261 NLQLAPSFAAPQAHPLPSHL-----SQSNVPPQLSHSSVPSPAPPRSVSQPTYFSQPMPQ 315

Query: 358 LSGEADP 364
            S    P
Sbjct: 316 FSSSFVP 322


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.310    0.126    0.353 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 194,583,073
Number of Sequences: 539616
Number of extensions: 8856376
Number of successful extensions: 91809
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 1993
Number of HSP's that attempted gapping in prelim test: 54965
Number of HSP's gapped (non-prelim): 22377
length of query: 523
length of database: 191,569,459
effective HSP length: 122
effective length of query: 401
effective length of database: 125,736,307
effective search space: 50420259107
effective search space used: 50420259107
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)