Query 009903
Match_columns 523
No_of_seqs 248 out of 2752
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 15:33:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009903.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009903hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u9t_A MCC alpha, methylcroton 100.0 2.3E-74 7.9E-79 631.9 36.2 457 63-519 19-477 (675)
2 3ouz_A Biotin carboxylase; str 100.0 2.8E-72 9.7E-77 593.1 50.5 445 67-513 2-446 (446)
3 3jrx_A Acetyl-COA carboxylase 100.0 2.2E-72 7.6E-77 602.9 44.6 447 68-518 53-560 (587)
4 3n6r_A Propionyl-COA carboxyla 100.0 2.1E-73 7.2E-78 624.9 27.1 448 70-517 1-468 (681)
5 3glk_A Acetyl-COA carboxylase 100.0 2.6E-71 8.8E-76 593.2 39.5 440 68-513 37-539 (540)
6 2vpq_A Acetyl-COA carboxylase; 100.0 5.8E-66 2E-70 545.9 47.1 447 71-517 1-448 (451)
7 1ulz_A Pyruvate carboxylase N- 100.0 6.6E-66 2.3E-70 545.4 46.1 447 70-517 1-447 (451)
8 3hbl_A Pyruvate carboxylase; T 100.0 2.9E-67 9.8E-72 602.0 34.8 447 69-517 2-456 (1150)
9 2w70_A Biotin carboxylase; lig 100.0 1.3E-64 4.4E-69 535.3 47.0 444 70-515 1-445 (449)
10 3va7_A KLLA0E08119P; carboxyla 100.0 4.2E-66 1.4E-70 593.2 38.1 445 68-515 28-473 (1236)
11 2dzd_A Pyruvate carboxylase; b 100.0 2E-63 7E-68 527.7 49.0 449 67-517 2-458 (461)
12 1w96_A ACC, acetyl-coenzyme A 100.0 5E-62 1.7E-66 527.1 46.8 441 68-512 44-552 (554)
13 2qf7_A Pyruvate carboxylase pr 100.0 2.7E-63 9.4E-68 570.4 38.8 449 69-517 12-475 (1165)
14 4dim_A Phosphoribosylglycinami 100.0 3.7E-50 1.2E-54 418.8 41.4 384 71-482 7-401 (403)
15 3vot_A L-amino acid ligase, BL 100.0 2.3E-48 7.8E-53 408.1 35.8 389 69-482 3-414 (425)
16 4e4t_A Phosphoribosylaminoimid 100.0 2.3E-46 8E-51 390.6 40.4 376 69-481 33-416 (419)
17 1kjq_A GART 2, phosphoribosylg 100.0 1.5E-45 5.1E-50 382.4 41.9 380 69-482 9-390 (391)
18 3k5i_A Phosphoribosyl-aminoimi 100.0 1E-45 3.5E-50 384.5 38.4 370 71-480 24-399 (403)
19 2dwc_A PH0318, 433AA long hypo 100.0 2.9E-45 1E-49 385.3 42.2 389 70-487 18-419 (433)
20 3aw8_A PURK, phosphoribosylami 100.0 2E-44 7E-49 371.1 39.3 359 73-480 1-361 (369)
21 1a9x_A Carbamoyl phosphate syn 100.0 6.2E-45 2.1E-49 419.3 38.1 398 69-499 5-432 (1073)
22 4ffl_A PYLC; amino acid, biosy 100.0 3.6E-45 1.2E-49 375.8 32.0 355 71-481 1-357 (363)
23 3ax6_A Phosphoribosylaminoimid 100.0 3.3E-44 1.1E-48 371.0 38.5 369 71-484 1-373 (380)
24 3q2o_A Phosphoribosylaminoimid 100.0 9.8E-44 3.4E-48 368.4 41.6 365 70-478 13-378 (389)
25 3orq_A N5-carboxyaminoimidazol 100.0 2.3E-43 7.8E-48 363.9 35.6 360 70-475 11-372 (377)
26 3lp8_A Phosphoribosylamine-gly 100.0 4.2E-42 1.4E-46 361.1 38.5 390 66-486 16-433 (442)
27 3eth_A Phosphoribosylaminoimid 100.0 1.7E-42 5.8E-47 352.4 33.4 338 71-481 1-341 (355)
28 2z04_A Phosphoribosylaminoimid 100.0 1.4E-42 4.8E-47 356.8 30.7 361 71-487 1-363 (365)
29 2ip4_A PURD, phosphoribosylami 100.0 3.1E-41 1.1E-45 353.0 38.5 380 72-487 1-404 (417)
30 2qk4_A Trifunctional purine bi 100.0 5.7E-42 2E-46 362.1 33.3 394 66-487 19-440 (452)
31 3mjf_A Phosphoribosylamine--gl 100.0 2.3E-41 7.7E-46 354.6 36.5 397 71-489 3-421 (431)
32 2yw2_A Phosphoribosylamine--gl 100.0 1.6E-41 5.6E-46 355.9 34.3 385 72-487 1-411 (424)
33 1vkz_A Phosphoribosylamine--gl 100.0 3E-41 1E-45 352.3 33.0 374 70-487 14-407 (412)
34 2yrx_A Phosphoribosylglycinami 100.0 6.6E-41 2.3E-45 353.8 35.3 390 66-487 16-430 (451)
35 2xcl_A Phosphoribosylamine--gl 100.0 3.1E-40 1E-44 345.9 31.5 383 72-487 1-409 (422)
36 3vmm_A Alanine-anticapsin liga 100.0 4.2E-38 1.4E-42 332.8 37.6 377 94-484 52-469 (474)
37 1a9x_A Carbamoyl phosphate syn 100.0 4.6E-38 1.6E-42 362.2 36.6 364 70-478 558-937 (1073)
38 2pn1_A Carbamoylphosphate synt 100.0 1.2E-36 4.2E-41 308.1 29.7 293 70-392 3-301 (331)
39 4fu0_A D-alanine--D-alanine li 100.0 3E-36 1E-40 308.4 21.1 301 71-383 3-342 (357)
40 4eg0_A D-alanine--D-alanine li 100.0 1.1E-35 3.7E-40 299.6 24.0 277 69-385 11-311 (317)
41 1ehi_A LMDDL2, D-alanine:D-lac 100.0 3E-34 1E-38 295.6 29.5 302 71-387 3-353 (377)
42 1iow_A DD-ligase, DDLB, D-ALA\ 100.0 2E-34 6.7E-39 288.5 26.0 273 70-385 1-302 (306)
43 3i12_A D-alanine-D-alanine lig 100.0 2.1E-34 7.1E-39 295.4 26.4 301 71-384 3-346 (364)
44 2i87_A D-alanine-D-alanine lig 100.0 4E-35 1.4E-39 301.0 20.0 300 71-384 3-337 (364)
45 3e5n_A D-alanine-D-alanine lig 100.0 2.1E-35 7.1E-40 304.6 17.8 301 71-384 22-365 (386)
46 3k3p_A D-alanine--D-alanine li 100.0 4.8E-34 1.7E-38 293.5 24.8 299 71-384 37-367 (383)
47 3tqt_A D-alanine--D-alanine li 100.0 7.2E-34 2.5E-38 291.3 23.0 301 71-384 4-347 (372)
48 3r5x_A D-alanine--D-alanine li 100.0 8.3E-34 2.8E-38 284.4 21.8 272 71-385 3-295 (307)
49 1e4e_A Vancomycin/teicoplanin 100.0 6.8E-34 2.3E-38 289.6 21.1 296 71-385 3-337 (343)
50 3se7_A VANA; alpha-beta struct 100.0 6.1E-34 2.1E-38 290.1 19.9 294 72-384 4-336 (346)
51 3lwb_A D-alanine--D-alanine li 100.0 1.6E-33 5.4E-38 289.3 21.9 230 143-383 109-360 (373)
52 2fb9_A D-alanine:D-alanine lig 100.0 8.7E-33 3E-37 278.8 20.6 290 70-385 2-317 (322)
53 2pvp_A D-alanine-D-alanine lig 100.0 3.5E-32 1.2E-36 278.6 20.2 230 143-390 107-349 (367)
54 1uc8_A LYSX, lysine biosynthes 100.0 9.4E-31 3.2E-35 258.1 19.4 272 74-388 2-278 (280)
55 2r85_A PURP protein PF1517; AT 100.0 4.5E-29 1.5E-33 252.6 28.3 264 70-365 1-291 (334)
56 2r7k_A 5-formaminoimidazole-4- 100.0 9.5E-29 3.3E-33 251.1 27.1 269 71-368 18-321 (361)
57 2pbz_A Hypothetical protein; N 99.9 2.8E-28 9.6E-33 243.1 11.5 252 70-365 1-272 (320)
58 3df7_A Putative ATP-grAsp supe 99.9 3.7E-26 1.3E-30 228.3 20.3 209 133-384 61-271 (305)
59 1gsa_A Glutathione synthetase; 99.9 7.6E-24 2.6E-28 212.2 17.4 287 72-388 2-312 (316)
60 1z2n_X Inositol 1,3,4-trisphos 99.9 4.6E-22 1.6E-26 200.4 16.9 241 72-365 12-302 (324)
61 3ln7_A Glutathione biosynthesi 99.8 1.8E-21 6.2E-26 213.8 10.7 244 130-387 433-754 (757)
62 3ln6_A Glutathione biosynthesi 99.8 1E-19 3.5E-24 200.5 20.4 198 176-386 476-747 (750)
63 1i7n_A Synapsin II; synapse, p 99.8 3.5E-19 1.2E-23 176.0 19.5 220 143-385 68-303 (309)
64 2p0a_A Synapsin-3, synapsin II 99.8 6E-19 2.1E-23 176.4 19.3 222 143-387 85-322 (344)
65 1pk8_A RAT synapsin I; ATP bin 99.8 9.4E-19 3.2E-23 177.7 20.3 220 143-385 180-415 (422)
66 1wr2_A Hypothetical protein PH 99.8 3.1E-19 1.1E-23 171.7 12.5 177 182-363 19-218 (238)
67 2q7d_A Inositol-tetrakisphosph 99.8 9.5E-18 3.3E-22 169.5 16.7 226 83-363 35-312 (346)
68 2cqy_A Propionyl-COA carboxyla 99.7 1.4E-17 4.6E-22 139.5 3.5 105 179-283 3-107 (108)
69 3t7a_A Inositol pyrophosphate 99.6 2E-15 6.8E-20 145.2 7.3 198 144-364 58-292 (330)
70 2nu8_B SCS-beta, succinyl-COA 99.4 2.1E-13 7.1E-18 139.5 9.1 170 183-363 3-203 (388)
71 2fp4_B Succinyl-COA ligase [GD 99.4 2.5E-13 8.6E-18 138.9 9.1 169 184-363 4-210 (395)
72 3ufx_B Succinyl-COA synthetase 99.1 3.9E-10 1.3E-14 115.4 10.5 109 184-294 4-118 (397)
73 3tig_A TTL protein; ATP-grAsp, 98.1 2.2E-05 7.6E-10 79.0 13.9 158 221-392 147-364 (380)
74 3mwd_A ATP-citrate synthase; A 97.3 0.00028 9.7E-09 72.3 6.7 107 186-294 9-135 (425)
75 3pff_A ATP-citrate synthase; p 97.0 0.00058 2E-08 75.3 5.9 108 185-294 8-135 (829)
76 3ic5_A Putative saccharopine d 97.0 0.0025 8.4E-08 52.5 8.1 93 70-172 4-97 (118)
77 3fwz_A Inner membrane protein 96.8 0.0012 4E-08 57.0 4.7 117 68-198 4-120 (140)
78 3llv_A Exopolyphosphatase-rela 96.6 0.0024 8.3E-08 54.8 5.5 90 71-168 6-95 (141)
79 3i6i_A Putative leucoanthocyan 96.5 0.026 8.7E-07 56.1 13.4 95 71-172 10-115 (346)
80 2g1u_A Hypothetical protein TM 96.5 0.013 4.6E-07 51.0 9.7 39 67-105 15-53 (155)
81 2r6j_A Eugenol synthase 1; phe 96.4 0.014 4.9E-07 57.1 10.6 123 68-199 8-150 (318)
82 1hdo_A Biliverdin IX beta redu 96.1 0.041 1.4E-06 49.7 11.3 72 72-152 4-76 (206)
83 2hmt_A YUAA protein; RCK, KTN, 96.1 0.012 4E-07 50.2 6.9 74 71-152 6-79 (144)
84 3nkl_A UDP-D-quinovosamine 4-d 95.8 0.042 1.5E-06 46.8 9.4 95 71-177 4-102 (141)
85 2duw_A Putative COA-binding pr 95.8 0.072 2.5E-06 46.0 10.9 101 71-179 13-128 (145)
86 3ff4_A Uncharacterized protein 95.7 0.054 1.9E-06 45.3 9.2 96 71-174 4-111 (122)
87 1y81_A Conserved hypothetical 95.7 0.075 2.6E-06 45.4 10.3 101 71-179 14-127 (138)
88 3qvo_A NMRA family protein; st 95.4 0.068 2.3E-06 49.9 9.8 75 68-151 20-96 (236)
89 2d59_A Hypothetical protein PH 95.3 0.14 4.6E-06 44.1 10.6 101 71-179 22-135 (144)
90 3l9w_A Glutathione-regulated p 95.1 0.011 3.7E-07 60.6 3.6 115 71-199 4-118 (413)
91 1iuk_A Hypothetical protein TT 95.1 0.081 2.8E-06 45.3 8.5 101 71-179 13-128 (140)
92 3r6d_A NAD-dependent epimerase 94.9 0.074 2.5E-06 48.9 8.4 75 69-152 3-82 (221)
93 1t2a_A GDP-mannose 4,6 dehydra 94.8 0.11 3.8E-06 52.0 10.1 81 65-152 18-111 (375)
94 3c1o_A Eugenol synthase; pheny 94.7 0.15 5.1E-06 49.8 10.5 121 70-199 3-148 (321)
95 3m2p_A UDP-N-acetylglucosamine 94.7 0.23 7.8E-06 48.2 11.8 69 70-151 1-70 (311)
96 3l4b_C TRKA K+ channel protien 94.6 0.048 1.6E-06 50.4 6.2 88 72-166 1-88 (218)
97 1qyc_A Phenylcoumaran benzylic 94.6 0.15 5.1E-06 49.3 10.1 93 71-170 4-107 (308)
98 1id1_A Putative potassium chan 94.5 0.078 2.7E-06 45.9 7.0 90 71-167 3-95 (153)
99 2gas_A Isoflavone reductase; N 94.5 0.21 7.3E-06 48.1 11.0 91 71-170 2-106 (307)
100 2c20_A UDP-glucose 4-epimerase 94.4 0.13 4.4E-06 50.3 9.3 73 71-152 1-76 (330)
101 3s2u_A UDP-N-acetylglucosamine 94.4 0.17 5.8E-06 50.7 10.2 101 70-172 1-119 (365)
102 2yy7_A L-threonine dehydrogena 94.3 0.095 3.3E-06 50.8 8.1 73 70-151 1-76 (312)
103 2pk3_A GDP-6-deoxy-D-LYXO-4-he 94.3 0.15 5.3E-06 49.5 9.6 75 67-152 8-83 (321)
104 1n7h_A GDP-D-mannose-4,6-dehyd 94.3 0.16 5.5E-06 50.9 9.9 77 69-152 26-115 (381)
105 4egb_A DTDP-glucose 4,6-dehydr 94.3 0.35 1.2E-05 47.5 12.3 75 70-151 23-106 (346)
106 3slg_A PBGP3 protein; structur 94.2 0.19 6.3E-06 50.2 10.1 73 69-150 22-98 (372)
107 1qyd_A Pinoresinol-lariciresin 94.2 0.24 8.1E-06 48.0 10.6 93 71-170 4-110 (313)
108 3sc6_A DTDP-4-dehydrorhamnose 94.2 0.12 4.2E-06 49.4 8.4 61 70-152 4-65 (287)
109 1rpn_A GDP-mannose 4,6-dehydra 94.2 0.18 6E-06 49.5 9.7 79 66-151 9-94 (335)
110 3dfz_A SIRC, precorrin-2 dehyd 94.2 0.055 1.9E-06 50.3 5.5 33 71-103 31-63 (223)
111 3c85_A Putative glutathione-re 94.2 0.039 1.3E-06 49.4 4.4 34 71-104 39-73 (183)
112 3dhn_A NAD-dependent epimerase 94.1 0.15 5.2E-06 46.8 8.7 71 71-151 4-75 (227)
113 1lss_A TRK system potassium up 93.9 0.082 2.8E-06 44.5 5.9 32 72-103 5-36 (140)
114 2c5a_A GDP-mannose-3', 5'-epim 93.9 0.24 8E-06 49.7 10.3 74 70-152 28-102 (379)
115 3abi_A Putative uncharacterize 93.8 0.1 3.5E-06 52.4 7.1 116 71-202 16-131 (365)
116 1ek6_A UDP-galactose 4-epimera 93.6 0.13 4.5E-06 50.7 7.6 76 70-152 1-90 (348)
117 3ius_A Uncharacterized conserv 93.6 0.044 1.5E-06 52.5 4.0 35 69-103 3-37 (286)
118 3orf_A Dihydropteridine reduct 93.6 0.28 9.7E-06 46.1 9.6 72 68-152 19-96 (251)
119 2wm3_A NMRA-like family domain 93.6 0.19 6.5E-06 48.4 8.6 72 71-152 5-81 (299)
120 2q1w_A Putative nucleotide sug 93.6 0.28 9.5E-06 48.1 9.9 75 71-152 21-98 (333)
121 3ijr_A Oxidoreductase, short c 93.6 0.2 6.7E-06 48.5 8.6 33 71-103 47-80 (291)
122 3n6x_A Putative glutathionylsp 93.5 0.08 2.8E-06 54.7 5.8 70 196-274 340-411 (474)
123 3e48_A Putative nucleoside-dip 93.5 0.42 1.4E-05 45.7 10.8 72 72-152 1-74 (289)
124 3enk_A UDP-glucose 4-epimerase 93.5 0.24 8.3E-06 48.5 9.3 77 70-151 4-86 (341)
125 4ina_A Saccharopine dehydrogen 93.5 0.19 6.4E-06 51.2 8.5 123 71-201 1-138 (405)
126 3o9z_A Lipopolysaccaride biosy 93.3 0.67 2.3E-05 45.2 12.0 93 71-173 3-101 (312)
127 2ydy_A Methionine adenosyltran 93.3 0.1 3.4E-06 50.8 6.0 67 70-151 1-68 (315)
128 3dqp_A Oxidoreductase YLBE; al 93.3 0.33 1.1E-05 44.4 9.2 69 73-153 2-73 (219)
129 2pzm_A Putative nucleotide sug 93.3 0.35 1.2E-05 47.3 10.0 75 71-152 20-97 (330)
130 4id9_A Short-chain dehydrogena 93.1 0.26 8.9E-06 48.5 8.8 67 70-151 18-85 (347)
131 2axq_A Saccharopine dehydrogen 93.0 0.21 7.2E-06 51.8 8.2 125 61-202 13-142 (467)
132 1uay_A Type II 3-hydroxyacyl-C 93.0 0.37 1.3E-05 44.6 9.3 70 70-152 1-75 (242)
133 2x4g_A Nucleoside-diphosphate- 92.9 0.32 1.1E-05 47.7 9.2 70 72-150 14-84 (342)
134 3keo_A Redox-sensing transcrip 92.5 0.13 4.4E-06 47.3 5.1 90 70-172 83-176 (212)
135 3dii_A Short-chain dehydrogena 92.5 0.19 6.4E-06 47.2 6.5 76 70-152 1-84 (247)
136 3gpi_A NAD-dependent epimerase 92.4 0.13 4.5E-06 49.2 5.3 34 71-104 3-36 (286)
137 4g65_A TRK system potassium up 92.4 0.07 2.4E-06 55.4 3.5 76 71-153 3-78 (461)
138 3ruf_A WBGU; rossmann fold, UD 92.3 0.27 9.4E-06 48.4 7.8 74 70-152 24-109 (351)
139 2jl1_A Triphenylmethane reduct 92.3 0.21 7E-06 47.7 6.7 89 72-169 1-99 (287)
140 3p19_A BFPVVD8, putative blue 92.3 0.24 8.2E-06 47.2 7.0 77 69-152 14-96 (266)
141 3ged_A Short-chain dehydrogena 92.2 0.15 5E-06 48.3 5.2 34 70-103 1-35 (247)
142 1rkx_A CDP-glucose-4,6-dehydra 92.2 0.53 1.8E-05 46.5 9.6 75 71-152 9-89 (357)
143 1p9l_A Dihydrodipicolinate red 92.1 0.91 3.1E-05 42.7 10.6 29 73-101 2-32 (245)
144 3rft_A Uronate dehydrogenase; 92.0 0.27 9.1E-06 46.7 7.0 70 71-152 3-73 (267)
145 1jw9_B Molybdopterin biosynthe 91.9 0.33 1.1E-05 45.9 7.3 32 71-102 31-63 (249)
146 3sxp_A ADP-L-glycero-D-mannohe 91.8 0.68 2.3E-05 45.9 10.0 75 70-152 9-99 (362)
147 4ea9_A Perosamine N-acetyltran 91.8 0.65 2.2E-05 42.7 9.1 34 69-102 10-43 (220)
148 2aef_A Calcium-gated potassium 91.7 0.1 3.5E-06 48.6 3.5 90 69-168 7-96 (234)
149 2p5y_A UDP-glucose 4-epimerase 91.7 0.53 1.8E-05 45.4 8.9 73 72-151 1-74 (311)
150 3vtz_A Glucose 1-dehydrogenase 91.5 0.88 3E-05 43.2 10.0 73 69-152 12-90 (269)
151 3kkj_A Amine oxidase, flavin-c 91.5 0.19 6.5E-06 46.4 5.2 33 70-102 1-33 (336)
152 2d1y_A Hypothetical protein TT 91.5 0.51 1.8E-05 44.4 8.3 75 71-152 6-86 (256)
153 1orr_A CDP-tyvelose-2-epimeras 91.5 0.49 1.7E-05 46.4 8.4 75 71-152 1-82 (347)
154 2nm0_A Probable 3-oxacyl-(acyl 91.4 0.94 3.2E-05 42.6 10.1 71 70-152 20-96 (253)
155 2we8_A Xanthine dehydrogenase; 91.3 0.64 2.2E-05 46.8 9.1 36 70-105 203-238 (386)
156 3ay3_A NAD-dependent epimerase 91.3 0.21 7.1E-06 47.3 5.2 71 70-152 1-72 (267)
157 2dkn_A 3-alpha-hydroxysteroid 91.3 0.32 1.1E-05 45.3 6.5 68 71-152 1-71 (255)
158 3gem_A Short chain dehydrogena 91.2 0.37 1.3E-05 45.6 6.9 75 71-152 27-108 (260)
159 2o23_A HADH2 protein; HSD17B10 91.2 0.64 2.2E-05 43.7 8.7 75 71-152 12-95 (265)
160 3f8d_A Thioredoxin reductase ( 91.2 0.37 1.3E-05 46.5 7.1 35 69-103 13-47 (323)
161 2ehd_A Oxidoreductase, oxidore 91.1 0.28 9.6E-06 45.3 5.9 76 70-152 4-87 (234)
162 4b79_A PA4098, probable short- 91.0 1.2 4.1E-05 41.8 10.1 75 71-152 11-87 (242)
163 2fwm_X 2,3-dihydro-2,3-dihydro 90.9 1.5 5.1E-05 40.9 10.9 71 71-152 7-83 (250)
164 3d7l_A LIN1944 protein; APC893 90.8 0.66 2.3E-05 41.6 8.0 62 72-152 4-67 (202)
165 3un1_A Probable oxidoreductase 90.8 1.1 3.6E-05 42.4 9.7 72 71-152 28-105 (260)
166 3tpc_A Short chain alcohol deh 90.7 1.4 4.8E-05 41.3 10.6 77 71-152 7-90 (257)
167 2cfc_A 2-(R)-hydroxypropyl-COM 90.7 0.41 1.4E-05 44.6 6.6 33 70-102 1-34 (250)
168 3iup_A Putative NADPH:quinone 90.6 1.5 5E-05 44.0 11.1 77 71-153 171-250 (379)
169 1sb8_A WBPP; epimerase, 4-epim 90.6 0.62 2.1E-05 45.9 8.2 73 71-152 27-111 (352)
170 1vl0_A DTDP-4-dehydrorhamnose 90.3 0.48 1.6E-05 45.3 7.0 62 69-152 10-72 (292)
171 2x5o_A UDP-N-acetylmuramoylala 90.3 1.8 6.2E-05 44.3 11.7 113 71-199 5-133 (439)
172 3k31_A Enoyl-(acyl-carrier-pro 90.2 0.62 2.1E-05 45.0 7.7 75 71-152 30-117 (296)
173 2z1m_A GDP-D-mannose dehydrata 90.2 1.1 3.7E-05 43.7 9.6 77 71-152 3-84 (345)
174 1pjq_A CYSG, siroheme synthase 90.2 0.5 1.7E-05 48.9 7.3 87 71-171 12-100 (457)
175 3pdi_B Nitrogenase MOFE cofact 90.2 0.91 3.1E-05 46.9 9.3 85 71-172 313-397 (458)
176 1db3_A GDP-mannose 4,6-dehydra 90.1 0.96 3.3E-05 44.8 9.3 76 71-151 1-86 (372)
177 2dtx_A Glucose 1-dehydrogenase 90.0 1.8 6.1E-05 40.9 10.6 70 71-152 8-83 (264)
178 1e6u_A GDP-fucose synthetase; 90.0 0.54 1.8E-05 45.5 7.1 61 71-152 3-64 (321)
179 1xq6_A Unknown protein; struct 90.0 0.51 1.8E-05 43.7 6.7 73 70-152 3-78 (253)
180 1dhr_A Dihydropteridine reduct 90.0 0.69 2.4E-05 43.0 7.6 72 70-152 6-85 (241)
181 3oa2_A WBPB; oxidoreductase, s 89.9 1.7 5.7E-05 42.5 10.6 93 71-173 3-102 (318)
182 1qsg_A Enoyl-[acyl-carrier-pro 89.9 0.35 1.2E-05 45.8 5.5 33 71-103 9-44 (265)
183 1uzm_A 3-oxoacyl-[acyl-carrier 89.8 1.4 4.7E-05 41.2 9.5 70 71-152 15-90 (247)
184 2nwq_A Probable short-chain de 89.7 0.3 1E-05 46.6 4.9 78 70-152 20-106 (272)
185 1kyq_A Met8P, siroheme biosynt 89.7 0.4 1.4E-05 45.9 5.7 34 71-104 13-46 (274)
186 1zud_1 Adenylyltransferase THI 89.5 2.4 8.3E-05 39.8 11.0 119 71-200 28-147 (251)
187 1udb_A Epimerase, UDP-galactos 89.5 1.4 4.8E-05 42.9 9.7 74 72-152 1-82 (338)
188 4e6p_A Probable sorbitol dehyd 89.5 0.57 2E-05 44.1 6.6 76 70-152 7-91 (259)
189 3m1a_A Putative dehydrogenase; 89.4 0.69 2.4E-05 44.1 7.2 76 70-152 4-88 (281)
190 1yo6_A Putative carbonyl reduc 89.4 0.91 3.1E-05 42.0 7.9 75 71-152 3-90 (250)
191 4gx0_A TRKA domain protein; me 89.3 0.73 2.5E-05 48.9 8.0 109 72-198 349-457 (565)
192 2bka_A CC3, TAT-interacting pr 89.3 0.53 1.8E-05 43.6 6.1 73 71-152 18-93 (242)
193 1geg_A Acetoin reductase; SDR 89.1 0.61 2.1E-05 43.8 6.5 33 70-102 1-34 (256)
194 3eag_A UDP-N-acetylmuramate:L- 89.1 1.4 4.9E-05 43.1 9.4 89 71-173 4-95 (326)
195 2q1s_A Putative nucleotide sug 89.0 0.82 2.8E-05 45.6 7.8 75 71-152 32-108 (377)
196 3tzq_B Short-chain type dehydr 89.0 1.2 4.2E-05 42.1 8.7 76 70-152 10-94 (271)
197 3i4f_A 3-oxoacyl-[acyl-carrier 89.0 0.49 1.7E-05 44.6 5.7 77 69-152 5-94 (264)
198 4iiu_A 3-oxoacyl-[acyl-carrier 88.9 0.67 2.3E-05 43.9 6.6 35 67-101 22-57 (267)
199 3afn_B Carbonyl reductase; alp 88.8 0.75 2.6E-05 42.9 6.9 77 71-152 7-94 (258)
200 1n2s_A DTDP-4-, DTDP-glucose o 88.8 0.6 2E-05 44.7 6.3 62 72-152 1-63 (299)
201 1gy8_A UDP-galactose 4-epimera 88.8 1.5 5.1E-05 43.8 9.5 74 72-152 3-102 (397)
202 3r1i_A Short-chain type dehydr 88.7 1.1 3.8E-05 42.6 8.1 75 71-152 32-118 (276)
203 3v2h_A D-beta-hydroxybutyrate 88.7 1.4 5E-05 41.9 8.9 37 65-101 19-56 (281)
204 3fbs_A Oxidoreductase; structu 88.7 0.49 1.7E-05 45.0 5.5 33 70-102 1-33 (297)
205 1nff_A Putative oxidoreductase 88.6 0.76 2.6E-05 43.4 6.8 75 71-152 7-90 (260)
206 2ag5_A DHRS6, dehydrogenase/re 88.5 1.4 4.7E-05 41.0 8.5 75 71-152 6-83 (246)
207 1cyd_A Carbonyl reductase; sho 88.5 0.57 2E-05 43.4 5.8 75 71-152 7-85 (244)
208 3vps_A TUNA, NAD-dependent epi 88.4 0.5 1.7E-05 45.6 5.5 35 69-103 5-40 (321)
209 4b8w_A GDP-L-fucose synthase; 88.3 1.4 4.9E-05 42.1 8.7 65 69-151 4-69 (319)
210 3dfu_A Uncharacterized protein 88.3 0.58 2E-05 43.6 5.5 88 70-172 5-94 (232)
211 3d3w_A L-xylulose reductase; u 88.3 0.77 2.6E-05 42.5 6.5 75 71-152 7-85 (244)
212 3rkr_A Short chain oxidoreduct 88.3 0.68 2.3E-05 43.7 6.2 75 71-152 29-115 (262)
213 4hv4_A UDP-N-acetylmuramate--L 88.3 1.1 3.9E-05 46.7 8.4 110 71-198 22-150 (494)
214 3o38_A Short chain dehydrogena 88.2 0.76 2.6E-05 43.3 6.5 77 71-152 22-110 (266)
215 3svt_A Short-chain type dehydr 88.1 0.72 2.5E-05 44.0 6.4 34 70-103 10-44 (281)
216 1yde_A Retinal dehydrogenase/r 88.1 0.97 3.3E-05 42.9 7.2 75 71-152 9-91 (270)
217 3ajr_A NDP-sugar epimerase; L- 88.1 1.2 4.2E-05 42.8 8.1 67 73-151 1-70 (317)
218 1kew_A RMLB;, DTDP-D-glucose 4 88.0 1.7 5.9E-05 42.6 9.3 73 73-152 2-82 (361)
219 1xg5_A ARPG836; short chain de 87.8 1 3.6E-05 42.7 7.3 32 71-102 32-64 (279)
220 3oec_A Carveol dehydrogenase ( 87.8 2.8 9.5E-05 40.7 10.5 34 70-103 45-79 (317)
221 2v6g_A Progesterone 5-beta-red 87.8 1 3.5E-05 44.3 7.5 71 72-151 2-80 (364)
222 2dt5_A AT-rich DNA-binding pro 87.8 0.53 1.8E-05 43.2 4.8 85 71-170 80-166 (211)
223 2dc1_A L-aspartate dehydrogena 87.7 1.7 5.8E-05 40.3 8.5 103 73-198 2-104 (236)
224 3h2s_A Putative NADH-flavin re 87.7 0.51 1.7E-05 43.0 4.8 32 72-103 1-33 (224)
225 3itj_A Thioredoxin reductase 1 87.7 0.44 1.5E-05 46.4 4.6 35 68-102 19-53 (338)
226 3ihm_A Styrene monooxygenase A 87.7 0.46 1.6E-05 48.6 4.9 35 68-102 19-53 (430)
227 3ftp_A 3-oxoacyl-[acyl-carrier 87.7 0.89 3.1E-05 43.2 6.7 76 70-152 27-114 (270)
228 2ggs_A 273AA long hypothetical 87.6 1.5 5.1E-05 41.1 8.2 64 73-152 2-66 (273)
229 3h7a_A Short chain dehydrogena 87.6 1.1 3.9E-05 41.9 7.3 78 70-152 6-92 (252)
230 1z45_A GAL10 bifunctional prot 87.5 1.8 6E-05 47.2 9.8 76 70-152 10-93 (699)
231 3l6e_A Oxidoreductase, short-c 87.5 0.8 2.7E-05 42.5 6.1 33 71-103 3-36 (235)
232 4hb9_A Similarities with proba 87.5 0.6 2E-05 46.8 5.6 32 72-103 2-33 (412)
233 1fjh_A 3alpha-hydroxysteroid d 87.5 0.55 1.9E-05 43.9 5.0 69 71-153 1-72 (257)
234 2h7i_A Enoyl-[acyl-carrier-pro 87.5 0.73 2.5E-05 43.6 5.9 33 71-103 7-42 (269)
235 3awd_A GOX2181, putative polyo 87.4 0.81 2.8E-05 42.8 6.2 33 71-103 13-46 (260)
236 1sny_A Sniffer CG10964-PA; alp 87.3 1 3.4E-05 42.4 6.8 36 70-105 20-59 (267)
237 1xgk_A Nitrogen metabolite rep 87.1 2.5 8.4E-05 41.8 9.8 73 71-151 5-81 (352)
238 3pxx_A Carveol dehydrogenase; 87.1 4.5 0.00015 38.2 11.4 33 71-103 10-43 (287)
239 1yvv_A Amine oxidase, flavin-c 87.1 0.6 2.1E-05 45.4 5.2 34 70-103 1-34 (336)
240 3rih_A Short chain dehydrogena 87.1 1.5 5.1E-05 42.2 8.0 78 70-152 40-128 (293)
241 3ics_A Coenzyme A-disulfide re 87.1 0.55 1.9E-05 50.1 5.3 38 67-104 32-71 (588)
242 2wsb_A Galactitol dehydrogenas 87.0 1.6 5.5E-05 40.6 8.0 75 71-152 11-94 (254)
243 2hrz_A AGR_C_4963P, nucleoside 87.0 2.1 7.1E-05 41.7 9.1 74 71-152 14-95 (342)
244 3ak4_A NADH-dependent quinucli 87.0 1.3 4.5E-05 41.6 7.4 75 71-152 12-95 (263)
245 3kvo_A Hydroxysteroid dehydrog 87.0 3.5 0.00012 40.7 10.7 35 71-105 45-80 (346)
246 2p91_A Enoyl-[acyl-carrier-pro 87.0 1.1 3.6E-05 42.9 6.8 75 71-152 21-108 (285)
247 2a4k_A 3-oxoacyl-[acyl carrier 86.9 1.2 4.1E-05 42.0 7.1 33 71-103 6-39 (263)
248 2z2v_A Hypothetical protein PH 86.9 0.89 3E-05 45.5 6.4 114 71-202 16-131 (365)
249 2ekp_A 2-deoxy-D-gluconate 3-d 86.9 1.1 3.9E-05 41.4 6.8 76 70-152 1-79 (239)
250 3e03_A Short chain dehydrogena 86.9 2.9 0.0001 39.5 9.8 34 71-104 6-40 (274)
251 3tl3_A Short-chain type dehydr 86.9 0.86 2.9E-05 42.8 6.0 75 71-152 9-88 (257)
252 3oig_A Enoyl-[acyl-carrier-pro 86.8 1.6 5.6E-05 41.0 8.0 33 71-103 7-42 (266)
253 2wyu_A Enoyl-[acyl carrier pro 86.7 0.69 2.4E-05 43.6 5.2 33 71-103 8-43 (261)
254 3ucx_A Short chain dehydrogena 86.7 0.97 3.3E-05 42.7 6.3 33 70-102 10-43 (264)
255 3osu_A 3-oxoacyl-[acyl-carrier 86.7 0.85 2.9E-05 42.5 5.8 33 70-102 3-36 (246)
256 3qiv_A Short-chain dehydrogena 86.6 0.77 2.6E-05 42.9 5.5 77 71-152 9-95 (253)
257 2pd4_A Enoyl-[acyl-carrier-pro 86.6 1.1 3.7E-05 42.6 6.6 34 71-104 6-42 (275)
258 3ec7_A Putative dehydrogenase; 86.5 0.85 2.9E-05 45.4 6.0 142 70-228 22-174 (357)
259 3hyw_A Sulfide-quinone reducta 86.5 0.61 2.1E-05 47.7 5.0 34 70-103 1-36 (430)
260 2bgk_A Rhizome secoisolaricire 86.5 1 3.5E-05 42.6 6.3 75 71-152 16-101 (278)
261 3lzw_A Ferredoxin--NADP reduct 86.4 0.54 1.8E-05 45.6 4.4 34 70-103 6-39 (332)
262 2xdq_B Light-independent proto 86.4 2.5 8.5E-05 44.3 9.7 87 70-172 302-394 (511)
263 1vl8_A Gluconate 5-dehydrogena 86.3 1.3 4.5E-05 41.9 7.0 33 71-103 21-54 (267)
264 3ef6_A Toluene 1,2-dioxygenase 86.3 0.82 2.8E-05 46.3 5.9 35 70-104 1-37 (410)
265 3ehe_A UDP-glucose 4-epimerase 86.2 0.62 2.1E-05 45.0 4.7 30 71-101 1-31 (313)
266 1ooe_A Dihydropteridine reduct 86.2 1.4 4.8E-05 40.6 7.0 34 71-104 3-37 (236)
267 3rd5_A Mypaa.01249.C; ssgcid, 86.1 1.1 3.8E-05 42.9 6.4 75 71-152 16-95 (291)
268 1oc2_A DTDP-glucose 4,6-dehydr 86.1 2.5 8.4E-05 41.3 9.1 73 71-152 4-84 (348)
269 3upl_A Oxidoreductase; rossman 86.0 1.2 4.3E-05 45.5 6.9 149 71-226 23-188 (446)
270 3f9i_A 3-oxoacyl-[acyl-carrier 86.0 0.86 2.9E-05 42.5 5.4 78 70-152 13-93 (249)
271 1ff9_A Saccharopine reductase; 86.0 1.6 5.5E-05 44.9 7.9 115 71-202 3-122 (450)
272 3q2i_A Dehydrogenase; rossmann 86.0 1.4 4.9E-05 43.6 7.3 89 71-172 13-103 (354)
273 3s55_A Putative short-chain de 85.9 5.6 0.00019 37.6 11.3 33 71-103 10-43 (281)
274 3l77_A Short-chain alcohol deh 85.9 0.69 2.4E-05 42.7 4.7 33 71-103 2-35 (235)
275 3tnl_A Shikimate dehydrogenase 85.8 1.3 4.5E-05 43.2 6.8 34 70-103 153-187 (315)
276 2ywl_A Thioredoxin reductase r 85.8 0.98 3.4E-05 39.6 5.5 32 72-103 2-33 (180)
277 4da9_A Short-chain dehydrogena 85.8 1.1 3.6E-05 42.9 6.1 32 70-101 28-60 (280)
278 3ctm_A Carbonyl reductase; alc 85.7 1.8 6.2E-05 41.0 7.7 33 71-103 34-67 (279)
279 1yb1_A 17-beta-hydroxysteroid 85.7 1.4 4.8E-05 41.7 6.8 32 71-102 31-63 (272)
280 3rui_A Ubiquitin-like modifier 85.7 1.6 5.4E-05 43.0 7.3 31 71-101 34-64 (340)
281 1f0k_A MURG, UDP-N-acetylgluco 85.7 4.5 0.00015 39.5 10.9 101 70-172 5-123 (364)
282 3ew7_A LMO0794 protein; Q8Y8U8 85.7 0.93 3.2E-05 41.0 5.4 32 72-103 1-33 (221)
283 1e3j_A NADP(H)-dependent ketos 85.7 1.2 4E-05 44.2 6.5 78 70-152 168-249 (352)
284 3tfo_A Putative 3-oxoacyl-(acy 85.5 1 3.6E-05 42.6 5.8 34 70-103 3-37 (264)
285 4b4o_A Epimerase family protei 85.5 0.96 3.3E-05 43.4 5.7 31 72-102 1-32 (298)
286 1lnq_A MTHK channels, potassiu 85.5 0.39 1.3E-05 47.3 2.9 112 71-198 115-226 (336)
287 4ezb_A Uncharacterized conserv 85.5 2.6 8.9E-05 41.1 8.8 36 69-104 22-58 (317)
288 4dgk_A Phytoene dehydrogenase; 85.5 0.61 2.1E-05 48.4 4.5 33 71-103 1-33 (501)
289 2q2v_A Beta-D-hydroxybutyrate 85.5 1.7 5.8E-05 40.6 7.3 76 71-152 4-88 (255)
290 2pd6_A Estradiol 17-beta-dehyd 85.5 2 6.7E-05 40.2 7.7 33 71-103 7-40 (264)
291 3e82_A Putative oxidoreductase 85.5 2.6 9E-05 41.9 9.0 143 71-229 7-154 (364)
292 3ko8_A NAD-dependent epimerase 85.4 0.54 1.8E-05 45.4 3.8 32 72-103 1-33 (312)
293 1hdc_A 3-alpha, 20 beta-hydrox 85.4 1.5 5.2E-05 41.0 6.9 77 71-152 5-88 (254)
294 4g65_A TRK system potassium up 85.3 0.92 3.1E-05 46.9 5.7 117 69-200 233-350 (461)
295 3e8x_A Putative NAD-dependent 85.3 0.86 2.9E-05 42.0 5.0 34 70-103 20-54 (236)
296 3grk_A Enoyl-(acyl-carrier-pro 85.3 1.1 3.7E-05 43.2 5.9 76 71-153 31-119 (293)
297 4dyv_A Short-chain dehydrogena 85.3 1.2 4E-05 42.4 6.1 77 71-152 28-111 (272)
298 3mz0_A Inositol 2-dehydrogenas 85.3 1.3 4.4E-05 43.7 6.5 146 70-227 1-152 (344)
299 3ai3_A NADPH-sorbose reductase 85.2 1.8 6.2E-05 40.6 7.4 33 71-103 7-40 (263)
300 2dq4_A L-threonine 3-dehydroge 85.2 0.92 3.2E-05 44.7 5.4 76 70-152 164-240 (343)
301 3m6i_A L-arabinitol 4-dehydrog 85.2 0.33 1.1E-05 48.4 2.1 78 70-152 179-261 (363)
302 3ek2_A Enoyl-(acyl-carrier-pro 85.1 1.5 5E-05 41.3 6.7 34 70-103 13-49 (271)
303 3lk7_A UDP-N-acetylmuramoylala 85.1 3.2 0.00011 42.6 9.7 96 71-180 9-107 (451)
304 2pnf_A 3-oxoacyl-[acyl-carrier 85.1 1.2 4.1E-05 41.2 6.0 77 71-152 7-94 (248)
305 1wma_A Carbonyl reductase [NAD 85.1 0.74 2.5E-05 43.3 4.5 32 71-102 4-37 (276)
306 3tjr_A Short chain dehydrogena 85.0 1.9 6.3E-05 41.6 7.5 76 70-152 30-117 (301)
307 2rhc_B Actinorhodin polyketide 85.0 2 6.7E-05 40.8 7.6 33 71-103 22-55 (277)
308 2ew8_A (S)-1-phenylethanol deh 85.0 2.4 8.3E-05 39.4 8.1 77 71-152 7-91 (249)
309 1w6u_A 2,4-dienoyl-COA reducta 85.0 1.5 5E-05 42.1 6.7 77 71-152 26-113 (302)
310 2nu8_A Succinyl-COA ligase [AD 85.0 5.2 0.00018 38.4 10.5 105 71-198 7-117 (288)
311 2eez_A Alanine dehydrogenase; 84.9 1.1 3.7E-05 44.9 5.9 33 71-103 166-198 (369)
312 1uls_A Putative 3-oxoacyl-acyl 84.9 1.9 6.6E-05 40.0 7.3 75 71-152 5-86 (245)
313 4dry_A 3-oxoacyl-[acyl-carrier 84.9 0.95 3.2E-05 43.3 5.2 75 71-152 33-120 (281)
314 2bc0_A NADH oxidase; flavoprot 84.9 1 3.5E-05 46.8 5.9 35 70-104 34-71 (490)
315 3n74_A 3-ketoacyl-(acyl-carrie 84.9 1.8 6.2E-05 40.5 7.2 77 71-152 9-92 (261)
316 4e4y_A Short chain dehydrogena 84.9 2.8 9.4E-05 38.8 8.4 72 70-152 3-79 (244)
317 2bll_A Protein YFBG; decarboxy 84.8 2.8 9.5E-05 40.7 8.8 32 72-103 1-34 (345)
318 3a28_C L-2.3-butanediol dehydr 84.8 1.9 6.6E-05 40.3 7.3 33 71-103 2-35 (258)
319 1zk4_A R-specific alcohol dehy 84.8 1.4 4.8E-05 40.9 6.3 32 71-102 6-38 (251)
320 3auf_A Glycinamide ribonucleot 84.7 1.9 6.6E-05 39.9 7.0 75 71-150 22-108 (229)
321 3pdi_A Nitrogenase MOFE cofact 84.7 1.5 5E-05 45.7 6.9 88 71-172 332-423 (483)
322 1spx_A Short-chain reductase f 84.7 1.2 4.2E-05 42.2 5.9 33 71-103 6-39 (278)
323 1iy8_A Levodione reductase; ox 84.7 1.8 6.3E-05 40.7 7.1 33 71-103 13-46 (267)
324 3nyw_A Putative oxidoreductase 84.7 1.4 4.8E-05 41.2 6.2 34 70-103 6-40 (250)
325 2xdo_A TETX2 protein; tetracyc 84.7 1 3.5E-05 45.3 5.6 35 69-103 24-58 (398)
326 1zem_A Xylitol dehydrogenase; 84.7 1.7 6E-05 40.8 6.9 33 71-103 7-40 (262)
327 4hkt_A Inositol 2-dehydrogenas 84.6 0.76 2.6E-05 45.1 4.5 143 70-227 2-148 (331)
328 2jah_A Clavulanic acid dehydro 84.6 1.8 6E-05 40.4 6.9 33 71-103 7-40 (247)
329 3f1l_A Uncharacterized oxidore 84.5 2.3 7.7E-05 39.7 7.7 33 71-103 12-45 (252)
330 3uxy_A Short-chain dehydrogena 84.4 3 0.0001 39.3 8.6 70 71-152 28-103 (266)
331 1gee_A Glucose 1-dehydrogenase 84.4 1.1 3.7E-05 42.0 5.4 32 71-102 7-39 (261)
332 1i24_A Sulfolipid biosynthesis 84.4 1.9 6.4E-05 43.2 7.5 74 71-151 11-108 (404)
333 3oti_A CALG3; calicheamicin, T 84.4 3.5 0.00012 41.1 9.5 32 71-102 20-56 (398)
334 3u7q_A Nitrogenase molybdenum- 84.4 1.9 6.6E-05 44.9 7.6 88 71-172 348-439 (492)
335 1oi7_A Succinyl-COA synthetase 84.3 3.6 0.00012 39.5 9.0 104 71-198 7-117 (288)
336 3uce_A Dehydrogenase; rossmann 84.3 1.4 4.7E-05 40.3 5.9 61 71-152 6-68 (223)
337 2zcu_A Uncharacterized oxidore 84.3 1.2 4.1E-05 42.1 5.7 69 73-150 1-72 (286)
338 3c24_A Putative oxidoreductase 84.3 1.1 3.9E-05 42.8 5.5 33 69-101 9-42 (286)
339 3rwb_A TPLDH, pyridoxal 4-dehy 84.3 1.6 5.6E-05 40.6 6.5 77 71-152 6-89 (247)
340 1xkq_A Short-chain reductase f 84.2 1.4 4.9E-05 41.8 6.2 33 71-103 6-39 (280)
341 4ibo_A Gluconate dehydrogenase 84.2 1.3 4.3E-05 42.2 5.7 31 71-101 26-57 (271)
342 3nrc_A Enoyl-[acyl-carrier-pro 84.2 2 7E-05 40.8 7.3 76 70-153 25-113 (280)
343 3v8b_A Putative dehydrogenase, 84.1 1.7 5.9E-05 41.5 6.7 77 71-152 28-114 (283)
344 2ae2_A Protein (tropinone redu 84.1 1.6 5.5E-05 40.9 6.4 32 71-102 9-41 (260)
345 1y8q_A Ubiquitin-like 1 activa 84.0 3.9 0.00013 40.4 9.4 119 71-201 36-155 (346)
346 3sc4_A Short chain dehydrogena 84.0 4.5 0.00015 38.5 9.7 34 71-104 9-43 (285)
347 3imf_A Short chain dehydrogena 84.0 1.5 5.2E-05 41.1 6.2 77 71-152 6-92 (257)
348 3rjz_A N-type ATP pyrophosphat 83.9 6.5 0.00022 36.5 10.3 144 71-232 5-150 (237)
349 1u7z_A Coenzyme A biosynthesis 83.9 4.6 0.00016 37.3 9.1 69 71-151 8-95 (226)
350 1g0o_A Trihydroxynaphthalene r 83.8 2.6 9E-05 40.0 7.9 33 71-103 29-62 (283)
351 3pk0_A Short-chain dehydrogena 83.8 1.5 5.2E-05 41.3 6.1 33 71-103 10-43 (262)
352 3gvc_A Oxidoreductase, probabl 83.7 1.5 5E-05 41.9 6.0 75 71-152 29-112 (277)
353 2gk4_A Conserved hypothetical 83.6 4.6 0.00016 37.4 9.0 70 71-150 3-91 (232)
354 4dqx_A Probable oxidoreductase 83.6 2 6.8E-05 40.9 6.9 77 71-152 27-110 (277)
355 2hq1_A Glucose/ribitol dehydro 83.6 1.7 5.8E-05 40.2 6.3 31 71-101 5-36 (247)
356 3ggo_A Prephenate dehydrogenas 83.5 1.3 4.4E-05 43.3 5.5 35 68-102 30-66 (314)
357 2rh8_A Anthocyanidin reductase 83.5 1.2 4.2E-05 43.3 5.5 36 68-103 6-42 (338)
358 1zmt_A Haloalcohol dehalogenas 83.5 1.1 3.7E-05 42.0 4.9 75 71-152 1-81 (254)
359 3uf0_A Short-chain dehydrogena 83.5 2.5 8.5E-05 40.1 7.5 31 71-101 31-62 (273)
360 2ho3_A Oxidoreductase, GFO/IDH 83.3 1.4 4.7E-05 43.1 5.7 88 72-172 2-90 (325)
361 3v2g_A 3-oxoacyl-[acyl-carrier 83.2 2 6.9E-05 40.7 6.7 31 71-101 31-62 (271)
362 3sx2_A Putative 3-ketoacyl-(ac 83.2 8.8 0.0003 36.1 11.4 33 71-103 13-46 (278)
363 3qy9_A DHPR, dihydrodipicolina 83.2 3.9 0.00013 38.2 8.5 30 71-100 3-32 (243)
364 3uve_A Carveol dehydrogenase ( 83.1 7.6 0.00026 36.7 10.9 34 70-103 10-44 (286)
365 3mtj_A Homoserine dehydrogenas 83.1 2.6 9E-05 43.1 7.9 112 72-199 11-132 (444)
366 3ioy_A Short-chain dehydrogena 83.1 1.5 5.3E-05 42.7 6.0 33 71-103 8-41 (319)
367 4ew6_A D-galactose-1-dehydroge 83.0 5.8 0.0002 38.8 10.2 83 71-173 25-110 (330)
368 3t4x_A Oxidoreductase, short c 83.0 2.2 7.6E-05 40.2 6.9 77 71-152 10-94 (267)
369 2gn4_A FLAA1 protein, UDP-GLCN 83.0 1.3 4.3E-05 43.7 5.4 73 71-152 21-100 (344)
370 3i1j_A Oxidoreductase, short c 82.9 2.6 8.9E-05 38.9 7.3 33 71-103 14-47 (247)
371 1fmc_A 7 alpha-hydroxysteroid 82.9 1.2 4.2E-05 41.4 5.0 32 71-102 11-43 (255)
372 3ado_A Lambda-crystallin; L-gu 82.9 1.1 3.7E-05 43.9 4.7 35 68-102 3-37 (319)
373 2hun_A 336AA long hypothetical 82.9 4.6 0.00016 39.0 9.4 72 72-152 4-84 (336)
374 3op4_A 3-oxoacyl-[acyl-carrier 82.9 1.6 5.5E-05 40.7 5.8 75 71-152 9-92 (248)
375 3h8v_A Ubiquitin-like modifier 82.9 3.1 0.00011 40.1 7.9 74 69-148 34-107 (292)
376 3rsc_A CALG2; TDP, enediyne, s 82.9 2.4 8.2E-05 42.5 7.5 33 70-102 19-56 (415)
377 3i23_A Oxidoreductase, GFO/IDH 82.8 0.69 2.3E-05 45.9 3.3 147 70-229 1-152 (349)
378 2b4q_A Rhamnolipids biosynthes 82.8 2.1 7.3E-05 40.6 6.7 32 71-102 29-61 (276)
379 1xu9_A Corticosteroid 11-beta- 82.8 1.3 4.5E-05 42.2 5.3 33 71-103 28-61 (286)
380 2vt3_A REX, redox-sensing tran 82.8 2.2 7.4E-05 39.2 6.4 31 71-101 85-117 (215)
381 2raf_A Putative dinucleotide-b 82.8 4.3 0.00015 36.8 8.5 36 68-103 16-51 (209)
382 3sju_A Keto reductase; short-c 82.7 1.7 5.7E-05 41.4 6.0 33 71-103 24-57 (279)
383 4e3z_A Putative oxidoreductase 82.7 2 6.8E-05 40.6 6.5 31 71-101 26-57 (272)
384 1pqw_A Polyketide synthase; ro 82.7 1 3.5E-05 40.3 4.2 34 70-103 38-72 (198)
385 3aek_B Light-independent proto 82.6 3.3 0.00011 43.5 8.6 87 70-172 279-371 (525)
386 3lyl_A 3-oxoacyl-(acyl-carrier 82.5 1.8 6.3E-05 40.1 6.1 75 71-152 5-91 (247)
387 4dmm_A 3-oxoacyl-[acyl-carrier 82.5 1.8 6.1E-05 41.0 6.0 32 71-102 28-60 (269)
388 3t7c_A Carveol dehydrogenase; 82.5 8.4 0.00029 36.8 11.0 35 69-103 26-61 (299)
389 1xhl_A Short-chain dehydrogena 82.5 1.8 6.1E-05 41.7 6.1 33 71-103 26-59 (297)
390 3db2_A Putative NADPH-dependen 82.4 1.5 5E-05 43.5 5.6 89 71-172 5-94 (354)
391 3h28_A Sulfide-quinone reducta 82.4 1.3 4.3E-05 45.2 5.3 34 70-103 1-36 (430)
392 3on5_A BH1974 protein; structu 82.4 2.1 7.2E-05 42.5 6.6 36 70-105 198-233 (362)
393 4g6h_A Rotenone-insensitive NA 82.3 0.78 2.7E-05 48.0 3.7 33 71-103 42-74 (502)
394 2bd0_A Sepiapterin reductase; 82.3 2.2 7.5E-05 39.3 6.5 32 71-102 2-41 (244)
395 1xq1_A Putative tropinone redu 82.3 1.5 5.3E-05 41.1 5.5 32 71-102 14-46 (266)
396 4gx0_A TRKA domain protein; me 82.2 1.3 4.3E-05 47.1 5.3 76 68-150 124-199 (565)
397 3i83_A 2-dehydropantoate 2-red 82.2 1.3 4.5E-05 43.2 5.1 33 70-102 1-33 (320)
398 2vns_A Metalloreductase steap3 82.1 1.4 4.8E-05 40.3 4.9 33 70-102 27-59 (215)
399 1yxm_A Pecra, peroxisomal tran 82.1 2.2 7.5E-05 40.9 6.6 32 71-102 18-50 (303)
400 3tqq_A Methionyl-tRNA formyltr 82.1 2.3 8E-05 41.4 6.7 37 70-106 1-37 (314)
401 4imr_A 3-oxoacyl-(acyl-carrier 82.0 3.3 0.00011 39.2 7.8 80 71-152 33-118 (275)
402 2gdz_A NAD+-dependent 15-hydro 81.9 2.7 9.2E-05 39.5 7.0 32 71-102 7-39 (267)
403 2ew2_A 2-dehydropantoate 2-red 81.9 1.3 4.6E-05 42.6 5.0 32 71-102 3-34 (316)
404 2z1n_A Dehydrogenase; reductas 81.8 3.1 0.0001 38.9 7.4 33 71-103 7-40 (260)
405 3grp_A 3-oxoacyl-(acyl carrier 81.7 2.3 7.9E-05 40.1 6.5 78 70-152 26-110 (266)
406 2ywr_A Phosphoribosylglycinami 81.7 2.3 7.8E-05 39.1 6.2 75 71-150 1-87 (216)
407 2vhw_A Alanine dehydrogenase; 81.7 1.6 5.3E-05 43.9 5.5 34 70-103 167-200 (377)
408 3tsc_A Putative oxidoreductase 81.7 9.2 0.00031 36.0 10.8 33 70-102 10-43 (277)
409 3is3_A 17BETA-hydroxysteroid d 81.6 2.3 7.7E-05 40.2 6.4 31 71-101 18-49 (270)
410 4eso_A Putative oxidoreductase 81.5 2.1 7.3E-05 40.0 6.1 33 71-103 8-41 (255)
411 3gms_A Putative NADPH:quinone 81.5 1.7 5.8E-05 42.7 5.7 78 69-152 143-222 (340)
412 3zv4_A CIS-2,3-dihydrobiphenyl 81.5 2.2 7.6E-05 40.6 6.3 77 71-152 5-88 (281)
413 3nzo_A UDP-N-acetylglucosamine 81.5 1.5 5.2E-05 44.2 5.4 76 71-151 35-120 (399)
414 4fc7_A Peroxisomal 2,4-dienoyl 81.3 4.3 0.00015 38.4 8.3 33 71-103 27-60 (277)
415 3oc4_A Oxidoreductase, pyridin 81.3 1.4 4.7E-05 45.3 5.0 35 70-104 1-37 (452)
416 3pgx_A Carveol dehydrogenase; 81.3 11 0.00038 35.5 11.2 33 70-102 14-47 (280)
417 3ezy_A Dehydrogenase; structur 81.2 1.4 4.9E-05 43.3 5.0 141 70-228 1-150 (344)
418 3lf2_A Short chain oxidoreduct 81.2 2 6.9E-05 40.4 5.9 33 71-103 8-41 (265)
419 4iin_A 3-ketoacyl-acyl carrier 81.2 2.3 8E-05 40.1 6.3 32 71-102 29-61 (271)
420 4dio_A NAD(P) transhydrogenase 81.0 2.3 7.9E-05 42.9 6.4 34 71-104 190-223 (405)
421 3k6j_A Protein F01G10.3, confi 81.0 2.5 8.6E-05 43.5 6.8 51 49-104 37-87 (460)
422 2pv7_A T-protein [includes: ch 81.0 1.4 4.9E-05 42.5 4.8 33 69-101 19-52 (298)
423 1pjc_A Protein (L-alanine dehy 80.9 1.5 5E-05 43.8 4.9 33 71-103 167-199 (361)
424 3r9u_A Thioredoxin reductase; 80.9 1.3 4.4E-05 42.4 4.5 32 70-101 3-35 (315)
425 2ph5_A Homospermidine synthase 80.9 4.1 0.00014 41.9 8.3 96 71-174 13-113 (480)
426 3rc1_A Sugar 3-ketoreductase; 80.9 1.3 4.3E-05 44.0 4.4 141 71-230 27-177 (350)
427 4eye_A Probable oxidoreductase 80.8 1.7 5.8E-05 42.8 5.4 77 70-153 159-237 (342)
428 3nks_A Protoporphyrinogen oxid 80.8 1.4 4.6E-05 45.4 4.9 34 70-103 1-36 (477)
429 3h8l_A NADH oxidase; membrane 80.8 1.5 5E-05 44.3 5.0 33 71-103 1-36 (409)
430 3m2t_A Probable dehydrogenase; 80.8 3.7 0.00013 40.6 7.9 90 72-173 6-97 (359)
431 1mio_A Nitrogenase molybdenum 80.7 4.9 0.00017 42.2 9.1 31 71-101 335-365 (533)
432 3jyn_A Quinone oxidoreductase; 80.6 1.1 3.9E-05 43.6 4.0 79 69-153 139-219 (325)
433 4egf_A L-xylulose reductase; s 80.6 1.1 3.6E-05 42.5 3.6 32 71-102 20-52 (266)
434 3g17_A Similar to 2-dehydropan 80.5 1.1 3.8E-05 43.1 3.8 34 70-103 1-34 (294)
435 1yqd_A Sinapyl alcohol dehydro 80.5 1.3 4.5E-05 44.1 4.4 73 70-153 187-261 (366)
436 3edm_A Short chain dehydrogena 80.4 3.9 0.00013 38.3 7.6 31 71-101 8-39 (259)
437 3gvx_A Glycerate dehydrogenase 80.4 5.2 0.00018 38.4 8.5 35 70-104 121-155 (290)
438 2ph3_A 3-oxoacyl-[acyl carrier 80.4 1.7 5.8E-05 40.1 4.9 30 71-100 1-31 (245)
439 4gsl_A Ubiquitin-like modifier 80.4 3 0.0001 44.2 7.3 32 70-101 325-356 (615)
440 3rp8_A Flavoprotein monooxygen 80.4 1.9 6.5E-05 43.3 5.7 33 71-103 23-55 (407)
441 3ip1_A Alcohol dehydrogenase, 80.3 1.7 5.8E-05 43.9 5.3 79 69-153 212-292 (404)
442 2io8_A Bifunctional glutathion 80.3 1.2 4.3E-05 47.5 4.4 118 159-296 474-598 (619)
443 2vou_A 2,6-dihydroxypyridine h 80.2 1.9 6.6E-05 43.1 5.7 32 71-102 5-36 (397)
444 1k0i_A P-hydroxybenzoate hydro 80.2 1.4 4.9E-05 44.0 4.6 32 70-101 1-32 (394)
445 3uog_A Alcohol dehydrogenase; 80.2 1.5 5.2E-05 43.6 4.8 78 69-152 188-266 (363)
446 3qlj_A Short chain dehydrogena 80.1 2.4 8.4E-05 41.2 6.2 33 70-102 26-59 (322)
447 2qa1_A PGAE, polyketide oxygen 79.9 1.8 6.2E-05 45.1 5.5 38 67-104 7-44 (500)
448 2zat_A Dehydrogenase/reductase 79.9 2.6 8.8E-05 39.5 6.1 33 71-103 14-47 (260)
449 3uuw_A Putative oxidoreductase 79.9 1.8 6E-05 41.9 5.0 88 71-173 6-95 (308)
450 1h5q_A NADP-dependent mannitol 79.9 3.1 0.00011 38.8 6.7 32 71-102 14-46 (265)
451 3tox_A Short chain dehydrogena 79.8 2.3 7.9E-05 40.5 5.8 32 71-102 8-40 (280)
452 3kux_A Putative oxidoreductase 79.8 5.7 0.00019 39.1 8.8 141 71-227 7-152 (352)
453 1x1t_A D(-)-3-hydroxybutyrate 79.7 3.1 0.00011 38.9 6.6 32 71-102 4-36 (260)
454 3oid_A Enoyl-[acyl-carrier-pro 79.7 2 6.9E-05 40.3 5.3 30 71-100 4-34 (258)
455 3doj_A AT3G25530, dehydrogenas 79.6 1.9 6.5E-05 41.8 5.2 33 71-103 21-53 (310)
456 3gaf_A 7-alpha-hydroxysteroid 79.6 3.1 0.00011 38.9 6.6 33 71-103 12-45 (256)
457 2qa2_A CABE, polyketide oxygen 79.6 2.1 7.1E-05 44.7 5.8 38 67-104 8-45 (499)
458 2x6t_A ADP-L-glycero-D-manno-h 79.5 2.1 7.1E-05 42.1 5.6 33 71-103 46-80 (357)
459 2c07_A 3-oxoacyl-(acyl-carrier 79.5 2.9 9.9E-05 39.8 6.4 75 71-152 44-130 (285)
460 3ezl_A Acetoacetyl-COA reducta 79.5 2.8 9.5E-05 39.0 6.2 32 70-101 12-44 (256)
461 1sby_A Alcohol dehydrogenase; 79.4 4 0.00014 37.9 7.3 33 71-103 5-39 (254)
462 2yv2_A Succinyl-COA synthetase 79.4 9.5 0.00032 36.7 10.0 104 71-198 13-124 (297)
463 1mio_B Nitrogenase molybdenum 79.4 4 0.00014 42.0 7.8 87 71-172 312-407 (458)
464 4fb5_A Probable oxidoreductase 79.3 1.9 6.5E-05 42.9 5.3 147 68-227 21-179 (393)
465 4huj_A Uncharacterized protein 79.3 1.2 4E-05 41.0 3.4 30 71-100 23-52 (220)
466 3asu_A Short-chain dehydrogena 79.3 1.9 6.6E-05 40.2 5.0 76 72-152 1-83 (248)
467 3ohs_X Trans-1,2-dihydrobenzen 79.3 0.94 3.2E-05 44.5 2.9 91 70-172 1-94 (334)
468 2uvd_A 3-oxoacyl-(acyl-carrier 79.2 2.4 8.3E-05 39.3 5.6 32 71-102 4-36 (246)
469 3pi7_A NADH oxidoreductase; gr 79.1 2.9 9.9E-05 41.2 6.4 75 72-152 166-242 (349)
470 3urh_A Dihydrolipoyl dehydroge 79.1 1.8 6.2E-05 44.9 5.2 34 69-102 23-56 (491)
471 3gt0_A Pyrroline-5-carboxylate 79.1 1.9 6.6E-05 40.2 4.9 32 70-101 1-36 (247)
472 1ae1_A Tropinone reductase-I; 79.1 3.9 0.00013 38.6 7.1 33 71-103 21-54 (273)
473 2gek_A Phosphatidylinositol ma 79.0 8.5 0.00029 37.9 10.0 102 69-172 18-134 (406)
474 3otg_A CALG1; calicheamicin, T 79.0 6 0.00021 39.3 8.9 32 71-102 20-56 (412)
475 3hn2_A 2-dehydropantoate 2-red 79.0 1.4 4.9E-05 42.7 4.1 33 70-102 1-33 (312)
476 3t4e_A Quinate/shikimate dehyd 79.0 3.4 0.00012 40.2 6.7 34 70-103 147-181 (312)
477 3ksu_A 3-oxoacyl-acyl carrier 78.9 2.4 8.1E-05 39.9 5.5 31 71-101 11-42 (262)
478 1r6d_A TDP-glucose-4,6-dehydra 78.9 7.4 0.00025 37.6 9.3 72 72-152 1-85 (337)
479 2gv8_A Monooxygenase; FMO, FAD 78.8 2.1 7.3E-05 43.7 5.5 34 70-103 5-40 (447)
480 3uko_A Alcohol dehydrogenase c 78.8 4.1 0.00014 40.6 7.5 78 69-152 192-272 (378)
481 1hxh_A 3BETA/17BETA-hydroxyste 78.8 2.4 8.1E-05 39.6 5.4 77 71-152 6-89 (253)
482 3ip3_A Oxidoreductase, putativ 78.8 1.8 6E-05 42.6 4.7 148 70-228 1-155 (337)
483 3o26_A Salutaridine reductase; 78.7 1.9 6.5E-05 41.3 4.8 33 71-103 12-45 (311)
484 1ryi_A Glycine oxidase; flavop 78.7 2.2 7.5E-05 42.2 5.4 34 70-103 16-49 (382)
485 3kzv_A Uncharacterized oxidore 78.6 2.3 8E-05 39.7 5.3 78 70-152 1-87 (254)
486 4e12_A Diketoreductase; oxidor 78.6 2.2 7.6E-05 40.7 5.2 32 71-102 4-35 (283)
487 3ktd_A Prephenate dehydrogenas 78.6 2.1 7E-05 42.4 5.1 35 68-102 5-39 (341)
488 2weu_A Tryptophan 5-halogenase 78.5 1.6 5.6E-05 45.4 4.6 34 70-103 1-37 (511)
489 1h2b_A Alcohol dehydrogenase; 78.3 1.6 5.6E-05 43.2 4.4 76 70-152 186-263 (359)
490 1f0y_A HCDH, L-3-hydroxyacyl-C 78.3 2.4 8.2E-05 40.9 5.4 32 71-102 15-46 (302)
491 3da8_A Probable 5'-phosphoribo 78.3 1.5 5E-05 40.3 3.6 76 69-150 10-96 (215)
492 1e7w_A Pteridine reductase; di 78.3 1.5 5.2E-05 42.0 4.0 31 71-101 9-40 (291)
493 3g0o_A 3-hydroxyisobutyrate de 78.3 2.2 7.4E-05 41.2 5.1 33 70-102 6-38 (303)
494 2zbw_A Thioredoxin reductase; 78.2 2.5 8.5E-05 40.9 5.6 33 71-103 5-37 (335)
495 3l6d_A Putative oxidoreductase 78.2 2.5 8.4E-05 40.9 5.5 34 69-102 7-40 (306)
496 2gf3_A MSOX, monomeric sarcosi 78.1 2.3 7.8E-05 42.2 5.4 34 70-103 2-35 (389)
497 2xve_A Flavin-containing monoo 78.1 2.2 7.6E-05 44.0 5.4 34 70-103 1-40 (464)
498 3jv7_A ADH-A; dehydrogenase, n 78.1 2.2 7.5E-05 42.0 5.2 77 69-152 170-248 (345)
499 3fhl_A Putative oxidoreductase 78.1 5.3 0.00018 39.5 8.1 138 71-229 5-152 (362)
500 1yb5_A Quinone oxidoreductase; 78.1 2.1 7E-05 42.4 5.0 77 70-152 170-248 (351)
No 1
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=100.00 E-value=2.3e-74 Score=631.88 Aligned_cols=457 Identities=49% Similarity=0.798 Sum_probs=416.0
Q ss_pred CCCccCC-CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHH
Q 009903 63 GALKVTC-RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS 141 (523)
Q Consensus 63 ~~~~~~~-~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~ 141 (523)
.+|++.+ |++||||+|+|+++++++++|+++|+++++++++.+..+.+.+++|+.+.+++.+..++|.+.+.|++++++
T Consensus 19 ~~mm~~~~m~~kILI~g~Geia~~iiraar~lGi~~vav~s~~d~~a~~~~~AD~~~~i~~~~~~~syld~~~i~~~a~~ 98 (675)
T 3u9t_A 19 SHMNPDYRSIQRLLVANRGEIACRVMRSARALGIGSVAVHSDIDRHARHVAEADIAVDLGGAKPADSYLRGDRIIAAALA 98 (675)
T ss_dssp ------CCCCSEEEECCCHHHHHHHHHHHHHHTCEEEEEECSGGGGCHHHHTCSEEEECCCSSGGGTTTCHHHHHHHHHH
T ss_pred ccccccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCchhHhhCCEEEEcCCCccccCccCHHHHHHHHHH
Confidence 3566665 789999999999999999999999999999998888888899999999999877777899999999999999
Q ss_pred cCCCEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcC
Q 009903 142 RGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELG 221 (523)
Q Consensus 142 ~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g 221 (523)
.++|+|+|++|+++|+..+++.+++.|++++||++++++.+.||..++++|+++|||+|+++...+.+.+++.++++++|
T Consensus 99 ~~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GVpvpp~~~~~~~s~~e~~~~a~~ig 178 (675)
T 3u9t_A 99 SGAQAIHPGYGFLSENADFARACEEAGLLFLGPPAAAIDAMGSKSAAKALMEEAGVPLVPGYHGEAQDLETFRREAGRIG 178 (675)
T ss_dssp TTCSEEECCSSTTTTCHHHHHHHHTTTCEESSCCHHHHHHHTSHHHHHHHHHHTTCCBCCCCCSCCCCTTHHHHHHHHSC
T ss_pred hCcCEEEeCCcccccCHHHHHHHHHcCCceeCCCHHHHHHhchHHHHHHHHHHcCcCcCCccccCCCCHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999985445789999999999999
Q ss_pred CcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeee
Q 009903 222 FPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQ 301 (523)
Q Consensus 222 ~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~ 301 (523)
||+||||..|+||+||++|++.+|+.++++.+..+....|+++.+++|+||+|++|++++++.|++|+++.+++++|+.+
T Consensus 179 yPvvvKp~~G~Gg~Gv~iv~~~~el~~a~~~~~~ea~~~fg~~~vlvEeyI~g~reiev~v~~d~~G~vv~l~~rd~s~q 258 (675)
T 3u9t_A 179 YPVLLKAAAGGGGKGMKVVEREAELAEALSSAQREAKAAFGDARMLVEKYLLKPRHVEIQVFADRHGHCLYLNERDCSIQ 258 (675)
T ss_dssp SSBCCBCCC------CCCBCCTTTHHHHHSCCCC--------CCCBCCBCCSSCBCEEEEEEECSSSCEEEEEEEECCCB
T ss_pred CcEEEEECCCCCCccEEEECCHHHHHHHHHHHHHHHHHhcCCCcEEEEeecCCCcEEEEEEEEcCCCCEEEEecccccee
Confidence 99999999999999999999999999999876655555567789999999999889999999999999999999999999
Q ss_pred ecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHH
Q 009903 302 RRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQ 381 (523)
Q Consensus 302 ~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~ 381 (523)
+.+.+.....|++.++++.+++|.+.+.++++++||.|++++||+++++|++||||||||++++++++++++|+|+++++
T Consensus 259 r~~qk~ie~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~dG~~~~iEiNpR~~~~~~~te~~tGvdl~~~~ 338 (675)
T 3u9t_A 259 RRHQKVVEEAPAPGLGAELRRAMGEAAVRAAQAIGYVGAGTVEFLLDERGQFFFMEMNTRLQVEHPVTEAITGLDLVAWQ 338 (675)
T ss_dssp SSSSBCEEEESCSSCCHHHHHHHHHHHHHHHHHTTCCSEEEEECCBCTTSCBCBCEEESSCCTTHHHHHHTTTCCHHHHH
T ss_pred eccceEEEECCCCCCCHHHHHHHHHHHHHHHHHcCCccceEEEEEEcCCCCEEEEeccccccCCchhhhhhcCCCHHHHH
Confidence 99999999999988999999999999999999999999999999999989999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecC-CCCcEEEeeeecCCcccCCCCCcceEEEEE
Q 009903 382 IHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPA-GGPFVRMDSHVYPDYVVPPSYDSLLGKLIV 460 (523)
Q Consensus 382 ~~~~~G~~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~-~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~ 460 (523)
+++++|++++..+.++...|+++.+++|++++..+|.|.+|.+..+..+ ..++++++..+++|+.|+++||+++|++++
T Consensus 339 l~~a~G~~l~~~~~~~~~~g~ai~~ri~aedp~~~f~P~~G~l~~~~~p~~~~gvr~d~~~~~G~~v~~~~ds~la~vi~ 418 (675)
T 3u9t_A 339 IRVARGEALPLTQEQVPLNGHAIEVRLYAEDPEGDFLPASGRLMLYREAAAGPGRRVDSGVREGDEVSPFYDPMLAKLIA 418 (675)
T ss_dssp HHHHTTCCCSCCTTTCCCCSEEEEEEEESCCTTTTSCCCCCBCSEEECCCCCTTEEEEESCCTTCBCCTTSCCEEEEEEE
T ss_pred HHHHCCCCCCCCccccccCcceeEEEEEeccCcccccCCCCEEEEEECCCCCCCEEEEecccCCCEeCCCCCCceEEEEE
Confidence 9999999998877777889999999999999999999999999999776 678999999999999999999999999999
Q ss_pred EcCCHHHHHHHHHHHhhcCeEeecccCHHHHHHhcCCccccCCccccCcccchhhHHhh
Q 009903 461 WAPTREKAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQELQA 519 (523)
Q Consensus 461 ~g~s~~ea~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (523)
+|+|+++|++++.++++.+.|.|+.||++||+.++.||+|.+|+++|+||.+|.++|.+
T Consensus 419 ~g~~r~~a~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~ 477 (675)
T 3u9t_A 419 WGETREEARQRLLAMLAETSVGGLRTNLAFLRRILGHPAFAAAELDTGFIARHQDDLLP 477 (675)
T ss_dssp EESSHHHHHHHHHHHHHTCEEESSCCTHHHHHHHHTCHHHHTTCCCTTHHHHTHHHHSC
T ss_pred EeCCHHHHHHHHHHHhhcEEEECccCCHHHHHHHhCCHHHhCCCcccchhhhcchhhcC
Confidence 99999999999999999999999999999999999999999999999999999999844
No 2
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=100.00 E-value=2.8e-72 Score=593.15 Aligned_cols=445 Identities=53% Similarity=0.916 Sum_probs=419.7
Q ss_pred cCCCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009903 67 VTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (523)
Q Consensus 67 ~~~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~ 146 (523)
+..|+|||||+|+|.++++++++|+++|+++++++++.+..+++.+++|+.+.+++.+..++|.+.+.+++++++.++|+
T Consensus 2 n~m~~~kiLI~g~g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~ 81 (446)
T 3ouz_A 2 NAMEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLKYADASICIGKARSSESYLNIPAIIAAAEIAEADA 81 (446)
T ss_dssp CTTCCCEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGGTTCTHHHHSSEEEEEECCTTTTGGGCHHHHHHHHHHHTCSE
T ss_pred CccccceEEEECCCHHHHHHHHHHHHcCCEEEEEEcCcccccchHhhCCEEEEcCCCCccccccCHHHHHHHHHHhCcCE
Confidence 35678999999999999999999999999999998888888999999999999888888889999999999999999999
Q ss_pred EEeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEE
Q 009903 147 LHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMI 226 (523)
Q Consensus 147 Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~Vv 226 (523)
|+|++|+++|+..+++.+++.|++++||+++++..+.||..++++|+++|||+|+++...+.+.+++.++++++|||+||
T Consensus 82 i~p~~g~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~~~~~~~~~e~~~~~~~~g~Pvvv 161 (446)
T 3ouz_A 82 IFPGYGFLSENQNFVEICAKHNIKFIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVIL 161 (446)
T ss_dssp EECCSSTTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSSCCSHHHHHHHHHHHCSSEEE
T ss_pred EEECCcccccCHHHHHHHHHCCCceECcCHHHHHHhCCHHHHHHHHHHcCCCcCCCcccCCCCHHHHHHHHHHhCCCEEE
Confidence 99999998899999999999999999999999999999999999999999999998322789999999999999999999
Q ss_pred EeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCce
Q 009903 227 KATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQK 306 (523)
Q Consensus 227 KP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~ 306 (523)
||..|+||+||+++++.+|+.++++.+.......+++..+++||||+|.+|++++++.++.|+++.++.+++..++.+.+
T Consensus 162 Kp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~d~~g~~~~~~~~~~~~~~~~~~ 241 (446)
T 3ouz_A 162 KAAAGGGGRGMRVVENEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQVIGDSFGNVIHVGERDCSMQRRHQK 241 (446)
T ss_dssp EETTCCTTCSEEEECSGGGHHHHHHHHHHHHHHHHSCCCEEEEECCSSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEE
T ss_pred EECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCCcEEEEEEEEcCCCCEEEEeeceeeeeecCce
Confidence 99999999999999999999999999887777777788999999999988999999999999999999999998888888
Q ss_pred eeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHc
Q 009903 307 LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAM 386 (523)
Q Consensus 307 ~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~ 386 (523)
.....|++.++++..+++.+.+.++++++|+.|++|+||+++++|++||+|||||++|++++++.++|+|++++++++++
T Consensus 242 ~~~~~p~~~l~~~~~~~l~~~a~~~~~~lg~~G~~~ve~~~~~~g~~~~iEiNpR~~g~~~~~~~~~G~dl~~~~~~~~~ 321 (446)
T 3ouz_A 242 LIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFEFLVDKNLDFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVAE 321 (446)
T ss_dssp EEEEESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEESSCCTTHHHHHHHHCCCHHHHHHHHHT
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEEEeCCCCEEEEEeECCCCCcceeeeeeeCCCHHHHHHHHHC
Confidence 88889987799999999999999999999999999999999988789999999999999999999999999999999999
Q ss_pred CCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHH
Q 009903 387 GGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRE 466 (523)
Q Consensus 387 G~~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~ 466 (523)
|++++ .+.+....|+++.++++++++ ..|.|.+|.+..+..|+.++++++..+++|+.|++++|+++|+|+++|+|++
T Consensus 322 G~~l~-~~~~~~~~g~ai~~ri~ae~~-~~~~p~~G~i~~~~~p~~~~vr~~~~~~~G~~v~~~~d~~~~~vi~~g~~~~ 399 (446)
T 3ouz_A 322 GYALP-SQESIKLNGHSIECRITAEDS-KTFLPSPGKITKYIPPAGRNVRMESHCYQDYSVPAYYDSMIGKLVVWAEDRN 399 (446)
T ss_dssp TCCCC-CGGGCCCCSEEEEEEEESBCT-TTCCBCCEECSEEECCCSTTEEEEECCCTTCEECTTTCCEEEEEEEEESSHH
T ss_pred CCCCC-cCCCCCcceEEEEEEeeccCC-CccCCCCcEEeEEecCCCCCEEEEcccccCCEeCCccCCcceEEEEEcCCHH
Confidence 99987 445567789999999999999 8899999999999888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCeEeecccCHHHHHHhcCCccccCCccccCcccch
Q 009903 467 KAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKH 513 (523)
Q Consensus 467 ea~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (523)
+|++++.++++.+.|+|+.||++||+.++.||+|.+|.++|.||.+|
T Consensus 400 ~a~~~~~~al~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (446)
T 3ouz_A 400 KAIAKMKVALDELLISGIKTTKDFHLSMMENPDFINNNYDTNYLARH 446 (446)
T ss_dssp HHHHHHHHHHHHCEEESSCCTHHHHHHHHTCHHHHTTCCCTTHHHHC
T ss_pred HHHHHHHHHHhhCEEeCccCCHHHHHHHhCChhhccCCccccccccC
Confidence 99999999999999999999999999999999999999999999876
No 3
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A*
Probab=100.00 E-value=2.2e-72 Score=602.86 Aligned_cols=447 Identities=35% Similarity=0.565 Sum_probs=388.2
Q ss_pred CCCccEEEEEcCcHHHHHHHHHHHHc---------CCcEEEEecCCC--CCCccccccCeeEEcCCCCCCCCCCCHHHHH
Q 009903 68 TCRQEKILVANRGEIAVRVIRTAHEM---------GIPCVAVYSTID--KDALHVKLADESVCIGEAPSSQSYLLIPNVL 136 (523)
Q Consensus 68 ~~~~k~ILi~g~g~~~~~vi~aa~~~---------G~~vi~v~~~~~--~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~ 136 (523)
.+|++||||+|+|+++++++++|+++ |++++++++..| ..+++.++||+.+.+++.+..++|.|.+.|+
T Consensus 53 ~~~~~kvLIanrGeiA~riira~r~lG~e~f~~e~Gi~tVav~s~~D~~~~a~~~~~ADe~v~i~~~~~~~syld~~~Il 132 (587)
T 3jrx_A 53 DRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELIV 132 (587)
T ss_dssp CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHHHH
T ss_pred CcccCEEEEECChHHHHHHHHHHHHhhhccccccCCceEEEEecccccCcCChhhHhCCEEEEeCCCCccccccCHHHHH
Confidence 57899999999999999999999987 799999987544 7888999999999998777788999999999
Q ss_pred HHHHHcCCCEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCC------------
Q 009903 137 SAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD------------ 204 (523)
Q Consensus 137 ~~~~~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~------------ 204 (523)
+++++.++|+|+|++|+++|++.+++.+++.|++++||++++++.+.||..++++|+++|||+|+++.
T Consensus 133 ~~a~~~~vdaV~pG~GflsEn~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~ak~ll~~aGVPvpp~~~~~l~~~~~~~~~ 212 (587)
T 3jrx_A 133 DIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDL 212 (587)
T ss_dssp HHHHHTTCSEEECCSSTTTTCTHHHHHHHTTTCEESSCCHHHHHHHCSHHHHHHHHHHTTCCBCCBTTTTCCCCC-----
T ss_pred HHHHHhCCCEEEeCCCccccCHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCeeccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999832
Q ss_pred ---------------ccCCCHHHHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEe
Q 009903 205 ---------------GLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLE 269 (523)
Q Consensus 205 ---------------~~~~s~~e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvE 269 (523)
..+.+.+++.++++++|||+||||..|+||+||++|++.+|+.++++.+..+. .+..++||
T Consensus 213 ~~~~~~~~~~~~~~~~~v~s~eea~~~a~~iGyPvVVKp~~GgGGkGv~iV~s~eEL~~a~~~a~~~~----~~~~vlVE 288 (587)
T 3jrx_A 213 QQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEI----PGSPIFLM 288 (587)
T ss_dssp -CCCCCCCCHHHHHTTSCCSHHHHHHHHHHHCSSEEEEETTCCSSSSEEEECSTTTHHHHHHHHHHHS----TTCCEEEE
T ss_pred ccccccccchhhccccccCCHHHHHHHHHhcCCeEEEEeCCCCCCCCeEEeCCHHHHHHHHHHHHhhc----cCCCEEEE
Confidence 11789999999999999999999999999999999999999999999887653 24789999
Q ss_pred eccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeC
Q 009903 270 KYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE 349 (523)
Q Consensus 270 efI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~ 349 (523)
+||+|.+|++++++.|+.|+++.+.+++|+.++.+.+.....|++.++++..+++.+.+.++++++||.|++++||++++
T Consensus 289 eyI~g~rei~V~vl~D~~G~vv~l~~rd~siqrr~qk~ie~aPa~~l~~~~~~~i~~~A~~~a~alGy~G~~~VEfl~d~ 368 (587)
T 3jrx_A 289 KLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYLYSQ 368 (587)
T ss_dssp ECCCSCEEEEEEEEECSSSCEEEEEEEEEEEESSSCEEEEEESCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEECS
T ss_pred EecCCCcEEEEEEEEcCCCCEEEEeeeeccccccccceeEecCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC
Confidence 99999899999999998899999999999999999989899999878999999999999999999999999999999998
Q ss_pred CCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcCCCCCCC--------------------cc--ccccceeEEEEE
Q 009903 350 RGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKLRYK--------------------QE--DIVLQGHSIECR 407 (523)
Q Consensus 350 ~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G~~~~~~--------------------~~--~~~~~~~ai~~~ 407 (523)
+|++||||||||++++++++++++|+|++++++++++|++++.. +. ++...|+++.+|
T Consensus 369 dG~~yflEINpRl~~e~~vte~~tGvdlv~~~lria~G~pL~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~ghaie~R 448 (587)
T 3jrx_A 369 DGSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGVTPISFETPSNPPLARGHVIAAR 448 (587)
T ss_dssp SSCEEEEEEESSCCTTHHHHHHHHTCCHHHHHHHHHTTCCGGGCHHHHHHTTCCTTCCCCCCSSSCSSCCCCCSEEEEEE
T ss_pred CCCEEEEEEeCCCCCccceeccccCCCHHHHHHHHHCCCCcccchhcccccccccccccccccccccccCCCCceEEEEe
Confidence 89999999999999999999999999999999999999988621 11 145789999999
Q ss_pred EeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHHHHHHHHHHHhhcCeEee-ccc
Q 009903 408 INAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITG-VPT 486 (523)
Q Consensus 408 ~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~ea~~~~~~~~~~i~i~~-~~~ 486 (523)
+|++++..+|.|++|.|..+..+..++++....+..+..|+++||+++|+|+++|+|+++|++++.++++++.|.| +.|
T Consensus 449 i~aedp~~~f~p~~G~i~~~~~~~~~~v~~~~~~~~~~~~~~~yd~~~~k~i~~g~~r~~a~~~~~~al~~~~i~g~~~t 528 (587)
T 3jrx_A 449 ITSENPDEGFKPSSGTVQELNFRSSKNVWGYFSVAATGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDFRT 528 (587)
T ss_dssp EEC----------CCCCEEEECSSCTTEEEEECCC----------CCEEEEEEEESSHHHHHHHHHHHHHHHHHSSTTSS
T ss_pred ecccCccccCCCCCcEEEEEEeCCCCceEEeccccccCCcCcccCcccceEEEEcCCHHHHHHHHHHHHhccEEeCCCCC
Confidence 9999999999999999999988888888754444333358999999999999999999999999999999999999 899
Q ss_pred CHHHHHHhcCCccccCCccccCcccchhhHHh
Q 009903 487 TIEYHKLILDVEDFKNGKVDTAFIPKHEQELQ 518 (523)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (523)
|++||+.+|.||+|.+|.++|+||.+|++++.
T Consensus 529 n~~~~~~~~~~~~f~~g~~~t~~~~~~~~~~~ 560 (587)
T 3jrx_A 529 TVEYLINLLETESFQNNDIDTGWLDYLIAEKV 560 (587)
T ss_dssp TTHHHHHHHTSHHHHTTCSCCGGGGC------
T ss_pred cHHHHHHHhCChhhccCCcchhHHhHhhhhhc
Confidence 99999999999999999999999999999874
No 4
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=100.00 E-value=2.1e-73 Score=624.86 Aligned_cols=448 Identities=50% Similarity=0.827 Sum_probs=362.0
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
|+|||||+|+|+++++++++|+++|+++++++++.+..+++.+++|+.+.+++.+..++|.+.+.+++++++.++|+|+|
T Consensus 1 m~~kiLIanrGeia~riiraar~lGi~~vav~sd~d~~a~~~~~aD~~~~i~p~~~~~syld~~~i~~~a~~~~~daI~p 80 (681)
T 3n6r_A 1 MFNKILIANRGEIACRVIKTARKMGISTVAIYSDADKQALHVQMADEAVHIGPPPANQSYIVIDKVMAAIRATGAQAVHP 80 (681)
T ss_dssp -CCCBCBSCCHHHHHHHHHHHGGGSCCBCCEECSTTSSCHHHHHSSCCEECSSSSGGGTTSCHHHHHHHHHHTCCSCCBC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEEcCCCCCChhHHhCCEEEEcCCCCcccCccCHHHHHHHHHHhCcCEEEE
Confidence 78999999999999999999999999999999999999999999999999988788889999999999999999999999
Q ss_pred CCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeC
Q 009903 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (523)
Q Consensus 150 ~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~ 229 (523)
++|+++|+..+++.+++.|++++||++++++.+.||..++++|+++|||+|+++...+.+.+++.++++++|||+||||.
T Consensus 81 g~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~dK~~~k~~l~~~GVPvpp~~~~~~~s~~e~~~~a~~igyPvVvKp~ 160 (681)
T 3n6r_A 81 GYGFLSENSKFAEALEAEGVIFVGPPKGAIEAMGDKITSKKIAQEANVSTVPGYMGLIEDADEAVKISNQIGYPVMIKAS 160 (681)
T ss_dssp CSSSSTTCHHHHHHHHTTTCCCSSSCHHHHHHTTSHHHHHHHHHTTTCCCCCC---------------------------
T ss_pred CCCccccCHHHHHHHHHcCCceECCCHHHHHHhCCHHHHHHHHHHcCcCcCCccccCcCCHHHHHHHHHhcCCcEEEEEC
Confidence 99999999999999999999999999999999999999999999999999998534788999999999999999999999
Q ss_pred CCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCceeeE
Q 009903 230 AGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLE 309 (523)
Q Consensus 230 ~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~~~ 309 (523)
.|+||+||+++++.+|+.++++.+..+....|+++.++||+||+|++|++++++.|++|+++.+++++|+.++++.+...
T Consensus 161 ~ggggkGv~iv~~~~el~~a~~~~~~ea~~~fg~~~vlvEe~I~g~rei~V~v~~d~~G~vv~l~~rd~s~qr~~~k~~e 240 (681)
T 3n6r_A 161 AGGGGKGMRIAWNDQEAREGFQSSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLCDSHGNGIYLGERECSIQRRNQKVVE 240 (681)
T ss_dssp ------------------------------------------CCSCEEEEEEEECCSSSCCEEEEEEECCCEETTEECEE
T ss_pred CCCCCCCEEEECCHHHHHHHHHHHHHHHHHhCCCCcEEEEeccCCCcEEEEEEEEeCCCCEEEEeeeecceeccCccEEE
Confidence 99999999999999999999998887766667788999999999988999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcCCC
Q 009903 310 EAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGK 389 (523)
Q Consensus 310 ~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G~~ 389 (523)
..|++.++++.+++|.+.+.++++++||.|++++||+++++|++||||||||++++++++++++|+|++++++++++|++
T Consensus 241 ~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~d~dg~~~~lEiNpR~~~~~~~te~~tGvdl~~~~l~~a~G~~ 320 (681)
T 3n6r_A 241 EAPSPFLDEATRRAMGEQAVALAKAVGYASAGTVEFIVDGQKNFYFLEMNTRLQVEHPVTELITGVDLVEQMIRVAAGEP 320 (681)
T ss_dssp EESCSSCCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEECTTSCCCCCEEECSCCTTHHHHHHHHTCCHHHHHHHHHTSCC
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEeCCCCEEEEecccccCCCcHHhHHHhCCCHHHHHHHHHCCCC
Confidence 99998899999999999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred CCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCC-C-------------------CcEEEeeeecCCcccCC
Q 009903 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAG-G-------------------PFVRMDSHVYPDYVVPP 449 (523)
Q Consensus 390 ~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~-~-------------------~~v~~~~~~~~G~~v~~ 449 (523)
++..+.++...|+++.+++|++++.++|.|++|.|..+..|. . ++++++..+++|+.|++
T Consensus 321 l~~~~~~~~~~g~ai~~ri~aedp~~~f~p~~G~i~~~~~p~~~~~~~~~~~~~w~~d~~~~~~~vr~d~~~~~g~~v~~ 400 (681)
T 3n6r_A 321 LSITQGDVKLTGWAIENRLYAEDPYRGFLPSIGRLTRYRPPAETAAGPLLVNGKWQGDAPSGEAAVRNDTGVYEGGEISM 400 (681)
T ss_dssp CSSCTTTCCCCSEEEEEEEESEEGGGTTEECCEECSCEECCCC--------------------CCEEEEESCCTTCEECT
T ss_pred CCCCccccceeEEEEEEEEecCCcccccCCCCcEEEEEECCCCCcccccccccccccccccCCCcEEEEccccCCCccCC
Confidence 988777778899999999999999999999999999887665 2 37999999999999999
Q ss_pred CCCcceEEEEEEcCCHHHHHHHHHHHhhcCeEeecccCHHHHHHhcCCccccCCccccCcccchhhHH
Q 009903 450 SYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQEL 517 (523)
Q Consensus 450 ~~~~~iG~vi~~g~s~~ea~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (523)
+||+++|+++++|+|+++|++++.++++.+.|.|+.||++||+.+|.||+|.+|.++|+||.+|++++
T Consensus 401 ~yd~~iak~i~~g~~r~~a~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~ 468 (681)
T 3n6r_A 401 YYDPMIAKLCTWAPTRAAAIEAMRIALDSFEVEGIGHNLPFLSAVMDHPKFISGDMTTAFIAEEYPEG 468 (681)
T ss_dssp TSCCEEEEEEEEESSHHHHHHHHHHHHHHCEECSSCCSHHHHHHHHHCHHHHHCCCCSSHHHHHCTTS
T ss_pred CCCCceeEEEEEcCCHHHHHHHHHHHHhcCEEECccCCHHHHHHHhCCHhhccCCcccchhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999875
No 5
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A
Probab=100.00 E-value=2.6e-71 Score=593.22 Aligned_cols=440 Identities=35% Similarity=0.569 Sum_probs=364.1
Q ss_pred CCCccEEEEEcCcHHHHHHHHHHHHc---------CCcEEEEecCCC--CCCccccccCeeEEcCCCCCCCCCCCHHHHH
Q 009903 68 TCRQEKILVANRGEIAVRVIRTAHEM---------GIPCVAVYSTID--KDALHVKLADESVCIGEAPSSQSYLLIPNVL 136 (523)
Q Consensus 68 ~~~~k~ILi~g~g~~~~~vi~aa~~~---------G~~vi~v~~~~~--~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~ 136 (523)
.+|+|||||+|+|+++++++++|+++ |++++++++..| ..+++.++||+.+.+++.+..++|.|.+.++
T Consensus 37 ~~~~~kvLianrGeia~riira~r~lg~e~~~~e~gi~~Vav~s~~D~~~~a~~~~~ADe~~~i~~~~~~~sy~d~~~ii 116 (540)
T 3glk_A 37 DRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELIV 116 (540)
T ss_dssp SCCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHHHH
T ss_pred cccccEEEEECChHHHHHHHHHHHHhccccccccCCcEEEEEEcCcccCcCChhHHhCCEEEEeCCCCcccccccHHHHH
Confidence 57899999999999999999999987 789999986444 7888999999999998777788999999999
Q ss_pred HHHHHcCCCEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCcc----------
Q 009903 137 SAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGL---------- 206 (523)
Q Consensus 137 ~~~~~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~---------- 206 (523)
+++++.++|+|+|++|+++|+..+++.+++.|++++||++++++.+.||..++++|+++|||+|++ ..
T Consensus 117 ~~a~~~~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~ll~~~GVPvp~~--~~~~l~~~~~~~ 194 (540)
T 3glk_A 117 DIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPW--SGSGLTVEWTED 194 (540)
T ss_dssp HHHHHTTCSEEECCSSGGGGCTHHHHHHHHTTCEESSCCHHHHC---CHHHHHHHHHHTTCCBCCB--TTTTCCCCCCCT
T ss_pred HHHHHhCCCEEEeCCCccccCHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCc--cccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999998 44
Q ss_pred -------------------CCCHHHHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEE
Q 009903 207 -------------------LQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVY 267 (523)
Q Consensus 207 -------------------~~s~~e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~l 267 (523)
+.+.+++.++++++|||+||||..|+||+|+++|++.+|+.++++.+..+. .+..++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~v~s~~ea~~~a~~igyPvVVKp~~ggGG~Gv~iv~~~~eL~~a~~~~~~~~----~~~~vl 270 (540)
T 3glk_A 195 DLQQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEI----PGSPIF 270 (540)
T ss_dssp TC----CCCCCHHHHHHTSCCSHHHHHHHHHHHCSSEEEEETTCC----EEEECSTTTHHHHHHHHHHHS----TTCCEE
T ss_pred ccccccccccccccccccCcCCHHHHHHHHHhcCCcEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhhc----cCCCEE
Confidence 789999999999999999999999999999999999999999999887653 347899
Q ss_pred EeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEE
Q 009903 268 LEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLL 347 (523)
Q Consensus 268 vEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~ 347 (523)
||+||+|++|++++++.|+.|+++.+..++|+.++.+.+.....|++.++++..+++.+.+.++++++|+.|++++||++
T Consensus 271 VEe~I~g~rei~V~vl~d~~G~vv~l~~rd~s~qr~~~k~ie~~Pa~~l~~~~~~~l~~~a~~~~~alG~~G~~~VEf~~ 350 (540)
T 3glk_A 271 LMKLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYLY 350 (540)
T ss_dssp EEECCSSEEEEEEEEEECTTSCEEEEEEEEEEEC---CCSEEEESCTTSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEE
T ss_pred EEEecCCCcEEEEEEEEcCCCCEEEEeceeeeeeecccceEEecCCCCCCHHHHHHHHHHHHHHHHHcCCccceEEEEEE
Confidence 99999998999999999988999999999999998888888888988679999999999999999999999999999999
Q ss_pred eCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcCCCCCCCc--------------------c--ccccceeEEE
Q 009903 348 DERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKLRYKQ--------------------E--DIVLQGHSIE 405 (523)
Q Consensus 348 ~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G~~~~~~~--------------------~--~~~~~~~ai~ 405 (523)
+++|++||+|||||++++++++++++|+|++++++++++|++++..+ . ++...|+++.
T Consensus 351 d~dg~~~~lEiNpR~~~~~~vte~~tGvdl~~~~lr~a~G~pL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~aie 430 (540)
T 3glk_A 351 SQDGSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGVTPISFETPSNPPLARGHVIA 430 (540)
T ss_dssp ETTSCEEEEEEECSCCTTHHHHHHHHTCCHHHHHHHHHTTCCGGGCHHHHHHTTCCSSCCSCCCSCCC----CCCSEEEE
T ss_pred cCCCCEEEEEEECCCCCcchhhHhHhCCCHHHHHHHHHCCCCcccccccccccccccccccccccccccccCCCceeEEE
Confidence 98899999999999999999999999999999999999999886211 1 1457799999
Q ss_pred EEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHHHHHHHHHHHhhcCeEee-c
Q 009903 406 CRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITG-V 484 (523)
Q Consensus 406 ~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~ea~~~~~~~~~~i~i~~-~ 484 (523)
+|+|++++..+|.|++|.|..+..+..++++.......+..|+++||+++|+|+++|+|+++|++++.++++++.|.| +
T Consensus 431 ~ri~aedp~~~f~p~~G~i~~~~~~~~~~v~~~~~~~~~~~~~~~yd~~~~k~i~~g~~r~~a~~~~~~al~~~~i~g~~ 510 (540)
T 3glk_A 431 ARITSENPDEGFKPSSGTVQELNFRSSKNVWGYFSVAATGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDF 510 (540)
T ss_dssp EEEC------------CCEEECCCSSCCSEEEEEEC------------CEEEEEEEESSHHHHHHHHHHHHHHHTCC---
T ss_pred EEEeccCCcccccCCceEEEEEEcCCCCcEEEEeccccCCCCCCccCcccceEEEEcCCHHHHHHHHHHHHhccEEeccc
Confidence 999999999999999999999987878888764444444468999999999999999999999999999999999999 8
Q ss_pred ccCHHHHHHhcCCccccCCccccCcccch
Q 009903 485 PTTIEYHKLILDVEDFKNGKVDTAFIPKH 513 (523)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (523)
.||++||+.+|.||+|.+|.++|+||.++
T Consensus 511 ~tn~~~~~~~~~~~~f~~~~~~t~~~~~~ 539 (540)
T 3glk_A 511 RTTVEYLINLLETESFQNNDIDTGWLDYL 539 (540)
T ss_dssp -HHHHHHHHHHHSHHHHHTCC--------
T ss_pred CCcHHHHHHHhCChhhcCCCccchhhhhc
Confidence 99999999999999999999999999876
No 6
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=100.00 E-value=5.8e-66 Score=545.86 Aligned_cols=447 Identities=54% Similarity=0.927 Sum_probs=404.5
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
+|+|||+|+|.++++++++|+++|+++++++++.+...+...++|+.+.+++.....++.|.+.+++++++.++|+|+++
T Consensus 1 ~k~ilI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~v~~~ 80 (451)
T 2vpq_A 1 MKKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDKDALHTQIADEAYCVGPTLSKDSYLNIPNILSIATSTGCDGVHPG 80 (451)
T ss_dssp -CEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHTTCSEEECC
T ss_pred CceEEEeCCCHHHHHHHHHHHHcCCEEEEEecccccccchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEEC
Confidence 47899999999999999999999999999987777777788899999987655556788899999999999999999999
Q ss_pred CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeCC
Q 009903 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (523)
Q Consensus 151 ~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~~ 230 (523)
+|+.+|+..+++.+++.|++++||+.+++..+.||..++++|+++|||+|+++...+.+.+++.+++++++||+||||..
T Consensus 81 ~g~~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp~~ 160 (451)
T 2vpq_A 81 YGFLAENADFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATA 160 (451)
T ss_dssp SSTTTTCHHHHHHHHTTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSCBSCHHHHHHHHHHHCSSEEEEETT
T ss_pred CCccccCHHHHHHHHHcCCeEECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccCcCCHHHHHHHHHhcCCcEEEEECC
Confidence 98888888888999999999999999999999999999999999999999973126889999999999999999999999
Q ss_pred CCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCceeeEe
Q 009903 231 GGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEE 310 (523)
Q Consensus 231 g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~~~~ 310 (523)
|+||+||+++++.+|+.++++.+.......+++..++|||||+|.+|++++++.+++|+++.++++.+...+.+.+....
T Consensus 161 g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 240 (451)
T 2vpq_A 161 GGGGKGIRVARDEKELETGFRMTEQEAQTAFGNGGLYMEKFIENFRHIEIQIVGDSYGNVIHLGERDCTIQRRMQKLVEE 240 (451)
T ss_dssp CCTTCSEEEESSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCCSEEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEE
T ss_pred CCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEEecCCCeEEEEEEEEcCCCCEEEEeccccchhccccceEEE
Confidence 99999999999999999999988765545566789999999999679999999998889999888777777777777777
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEe-CCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcCCC
Q 009903 311 APSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLD-ERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGK 389 (523)
Q Consensus 311 ~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~-~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G~~ 389 (523)
.|++.++++..+++.+.+.++++++|+.|++++||+++ ++|++||+|||||+++++++++.++|+|++++++++++|.+
T Consensus 241 ~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~~~g~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~~ 320 (451)
T 2vpq_A 241 APSPILDDETRREMGNAAVRAAKAVNYENAGTIEFIYDLNDNKFYFMEMNTRIQVEHPVTEMVTGIDLVKLQLQVAMGDV 320 (451)
T ss_dssp ESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTTCC
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECCCCCEEEEEeeCCCCCceehhhHHhCCCHHHHHHHHHCCCC
Confidence 88876899999999999999999999999999999999 88889999999999988888888899999999999999998
Q ss_pred CCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHHHHH
Q 009903 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAI 469 (523)
Q Consensus 390 ~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~ea~ 469 (523)
++..+.++...++++++++|++++..++.|.+|.+..+..+..++++++.+++.|+.+++.+++++|+|+++|+|+++|.
T Consensus 321 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~p~~g~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~v~~~g~~~~ea~ 400 (451)
T 2vpq_A 321 LPYKQEDIKLTGHAIEFRINAENPYKNFMPSPGKIEQYLAPGGYGVRIESACYTNYTIPPYYDSMVAKLIIHEPTRDEAI 400 (451)
T ss_dssp CSCCGGGCCCCSEEEEEEEESEEGGGTTEECCSBCSEEECCCSTTEEEECCCCTTCBCCTTTCCEEEEEEEEESSHHHHH
T ss_pred CCCcccccCcCceEeeeEeeeeccccccCCCCCEEeEEECCCCCCcccccccccCCccCcccccccEEEEEEeCCHHHHH
Confidence 87654445667889999999998877888899999888766567888888999999998888889999999999999999
Q ss_pred HHHHHHhhcCeEeecccCHHHHHHhcCCccccCCccccCcccchhhHH
Q 009903 470 ERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQEL 517 (523)
Q Consensus 470 ~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (523)
++++++++.+.|+|+.||.+|++.++.||+|.+|.++|.||.+|+++|
T Consensus 401 ~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
T 2vpq_A 401 MAGIRALSEFVVLGIDTTIPFHIKLLNNDIFRSGKFNTNFLEQNSIMN 448 (451)
T ss_dssp HHHHHHHHTCEEESSCCSHHHHHHHHTCHHHHHTCCCTTTTTTSCTTC
T ss_pred HHHHHHHhccEEeCcCCCHHHHHHHhCCHhhhcCCCccHHHhhhhhhh
Confidence 999999999999999999999999999999999999999999998765
No 7
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=100.00 E-value=6.6e-66 Score=545.44 Aligned_cols=447 Identities=53% Similarity=0.883 Sum_probs=402.9
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
|+|+|||+|+|..+.+++++|+++|+++++++++.+..++...++|+.+.+++. ..+++.|.+.+++++++.++|+|++
T Consensus 1 m~k~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~~~p~-~~~~~~d~~~l~~~~~~~~~d~v~~ 79 (451)
T 1ulz_A 1 MVNKVLVANRGEIAVRIIRACKELGIPTVAIYNEVESTARHVKLADEAYMIGTD-PLDTYLNKQRIINLALEVGADAIHP 79 (451)
T ss_dssp CCSSEEECCCHHHHHHHHHHHHHHTCCEEEEECGGGTTCHHHHHSSEEEECCSS-TTHHHHCHHHHHHHHHHTTCCEEEC
T ss_pred CCceEEEECCcHHHHHHHHHHHHcCCeEEEEechhhcccchhhhCcEEEEcCCC-cccccCCHHHHHHHHHHcCCCEEEE
Confidence 678999999999999999999999999999987777777888999999877543 5557788999999999999999999
Q ss_pred CCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeC
Q 009903 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (523)
Q Consensus 150 ~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~ 229 (523)
++|+.+|+..+++.+++.|++++||+++++..+.||..++++|+++|||+|+++...+.+.+++.+++++++||+||||.
T Consensus 80 ~~g~~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp~ 159 (451)
T 1ulz_A 80 GYGFLAENAEFAKMCEEAGITFIGPHWKVIELMGDKARSKEVMKKAGVPVVPGSDGVLKSLEEAKALAREIGYPVLLKAT 159 (451)
T ss_dssp CSSTTTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSSCCCHHHHHHHHHHHCSSEEEEEC
T ss_pred CCCccccCHHHHHHHHHCCCeEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHcCCCEEEEEC
Confidence 99888888888899999999999999999999999999999999999999998211688999999999999999999999
Q ss_pred CCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCceeeE
Q 009903 230 AGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLE 309 (523)
Q Consensus 230 ~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~~~ 309 (523)
.|+||+||+++++.+|+.++++.+.......+++..+++||||+|.+|++++++.+.+|+++.+..+.+...+.+.....
T Consensus 160 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~~~~~ 239 (451)
T 1ulz_A 160 AGGGGRGIRICRNEEELVKNYEQASREAEKAFGRGDLLLEKFIENPKHIEYQVLGDKHGNVIHLGERDCSIQRRNQKLVE 239 (451)
T ss_dssp SSSSCCSCEEESSHHHHHHHHHHHHHHHHHTTSCCCEEEEECCCSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEE
T ss_pred CCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCeEEEEEEEEcCCCCEEEEeeeeccccccccccee
Confidence 99999999999999999999998876655566678999999999978999999998888999888777777777777777
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcCCC
Q 009903 310 EAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGK 389 (523)
Q Consensus 310 ~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G~~ 389 (523)
..|++.++++..+++.+.+.++++++|+.|++++||+++++|++||||||||+++++++++.++|+|++++++++++|.+
T Consensus 240 ~~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~~g~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~~ 319 (451)
T 1ulz_A 240 IAPSLILTPEKREYYGNIVTKAAKEIGYYNAGTMEFIADQEGNLYFIEMNTRIQVEHPVSEMVTGIDIVKWQIKIAAGEP 319 (451)
T ss_dssp EESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTTCC
T ss_pred ECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEeCCCCEEEEEeeCCCCccchHHHHHhCCCHHHHHHHHHcCCC
Confidence 78886689999999999999999999999999999999988899999999999988888888999999999999999998
Q ss_pred CCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHHHHH
Q 009903 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAI 469 (523)
Q Consensus 390 ~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~ea~ 469 (523)
++..+..+...++++++++|++++..++.|.+|.+..+..+..++++++.+++.|+.+++++++++|+|+++|+|+++|+
T Consensus 320 l~~~~~~~~~~~~a~~~~~~~~~~~~~~~p~~g~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~v~~~g~~~~ea~ 399 (451)
T 1ulz_A 320 LTIKQEDVKFNGYAIECRINAEDPKKNFAPSTRVIERYYVPGGFGIRVEHAAARGFEVTPYYDSMIAKLITWAPTWDEAV 399 (451)
T ss_dssp CCCCGGGCCCCSEEEEEEEESEEGGGTTEECCSBCCSEECCCSTTEEEEECCCTTCBCCSSSCCEEEEEEEEESSHHHHH
T ss_pred CCCccccCCCceEEEEEeccccCcccCcCCCCceeceEECCCCCCcccccCccCCCEecccccchheEEEEECCCHHHHH
Confidence 87544445566788999999988877788888988877665557788888899999999888888999999999999999
Q ss_pred HHHHHHhhcCeEeecccCHHHHHHhcCCccccCCccccCcccchhhHH
Q 009903 470 ERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQEL 517 (523)
Q Consensus 470 ~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (523)
++++++++.+.++|..||+.+++.+|.||+|.+|.++|.||.+|.+.+
T Consensus 400 ~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
T 1ulz_A 400 ERMRAALETYEITGVKTTIPLLINIMKEKDFKAGKFTTKYLEEHPEVF 447 (451)
T ss_dssp HHHHHHHHTCEECSSCCSHHHHHHHHHCHHHHHTCCCTTTTTTCGGGG
T ss_pred HHHHHHHhhcEEeCccCCHHHHHHHhCCHHHhcCCCcchhhhhhHhhc
Confidence 999999999999999999999999999999999999999999997654
No 8
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=100.00 E-value=2.9e-67 Score=601.98 Aligned_cols=447 Identities=46% Similarity=0.771 Sum_probs=404.2
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCC-CCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEA-PSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~-~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
+|++||||+|+|+++++++++|+++|+++++++++.+....+..++|+.+.+++. ...++|.+.+.+++++++.++|+|
T Consensus 2 ~~~kkVLIagrGeia~riiraa~elGi~vVav~s~~d~~s~~~~~ADe~~~ig~~~~~~~syld~~~Ii~~a~~~~~DaI 81 (1150)
T 3hbl_A 2 KQIKKLLVANRGEIAIRIFRAAAELDISTVAIYSNEDKSSLHRYKADESYLVGSDLGPAESYLNIERIIDVAKQANVDAI 81 (1150)
T ss_dssp -CCCEEEECCCHHHHHHHHHHHHHTTCEEEEEECGGGTTCGGGGTSSEEEECCTTSCTTGGGTCHHHHHHHHHHTTCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCcccchhhhhcceeeecCCCCCccccccCHHHHHHHHHHhCCCEE
Confidence 4689999999999999999999999999999998888889999999999998644 344688999999999999999999
Q ss_pred EeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEE
Q 009903 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (523)
Q Consensus 148 i~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvK 227 (523)
+|++|+++|+..+++.+++.|++++||++++++.+.||..++++|+++|||+|+++...+.+.+++.++++++|||+|||
T Consensus 82 ~pg~gflsE~~~~a~~le~~Gi~~iGp~~eai~~~~DK~~~r~ll~~aGIPvpp~~~~~v~s~eea~~~a~~iGyPvVVK 161 (1150)
T 3hbl_A 82 HPGYGFLSENEQFARRCAEEGIKFIGPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIKSYELAKEFAEEAGFPLMIK 161 (1150)
T ss_dssp ECTTTTSTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSCBCSSSTTTTTGGGTCSSEEEE
T ss_pred EECCCcccccHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCcCCCCccccCCCCHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999994337889999999999999999999
Q ss_pred eCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCcee
Q 009903 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKL 307 (523)
Q Consensus 228 P~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~ 307 (523)
|..|+||+|+++|++.+|+.++++.+.......|+++.+++|+||+|++|++++++.|+.|+++++.+++|+.++++.+.
T Consensus 162 P~~GgGg~Gv~vv~s~eeL~~a~~~a~~~a~~~fg~~~vlVEeyI~G~reieV~vl~d~~G~vv~l~er~~s~qr~~~k~ 241 (1150)
T 3hbl_A 162 ATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDNPKHIEVQVIGDEHGNIVHLFERDCSVQRRHQKV 241 (1150)
T ss_dssp CCC-------CEECCSSSCTHHHHSSSSSCC------CBEEECCCSSCEEEEEEEEECSSSCEEEEEEEEEEEESSSCEE
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEccCCCcEEEEEEEEeCCCCEEEEEeeccceeccCcee
Confidence 99999999999999999999999876544333455689999999999889999999999999999999999999999999
Q ss_pred eEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcC
Q 009903 308 LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMG 387 (523)
Q Consensus 308 ~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G 387 (523)
....|++.++++.++++.+.+.++++++||.|++++||+++++ ++||||||||+++++++++.++|+|++++++++++|
T Consensus 242 ~e~~Pa~~l~~~~~~~l~~~a~~~~~alG~~G~~~vEflvd~d-~~y~iEINpR~~g~~~vte~~tGvDlv~~~i~ia~G 320 (1150)
T 3hbl_A 242 VEVAPSVGLSPTLRQRICDAAIQLMENIKYVNAGTVEFLVSGD-EFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAG 320 (1150)
T ss_dssp EEESSCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETT-EEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTT
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEECC-eEEEEEEeCCCCCCcceeehhcCCCHHHHHHHHHCC
Confidence 9999997799999999999999999999999999999999987 599999999999999999999999999999999999
Q ss_pred CCCCC------CccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeee-ecCCcccCCCCCcceEEEEE
Q 009903 388 GKLRY------KQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSH-VYPDYVVPPSYDSLLGKLIV 460 (523)
Q Consensus 388 ~~~~~------~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~-~~~G~~v~~~~~~~iG~vi~ 460 (523)
.+++. .+.++...|+++.+|+|++++..+|.|.+|.|..+..+..++++++.. ++.|+.|+++||+++|+|++
T Consensus 321 ~~L~~~~~~~~~q~~i~~~G~ai~~Ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~v~~~yds~lakvi~ 400 (1150)
T 3hbl_A 321 ADLFGEEINMPQQKDITTLGYAIQCRITTEDPLNDFMPDTGTIIAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLST 400 (1150)
T ss_dssp CCTTSTTTCCCCGGGCCCCSEEEEEEECSEEGGGTSEECCCCCCEEECCCCTTEEEEESSCSSSCCCCTTSCCCSEEEEE
T ss_pred CCCCccccccccccccccceEEEEEEEeccCCccccCCCCceEEEEEcCCCCceeccccccccCCEeCCcCCCceeEEEE
Confidence 99875 344567789999999999999999999999999998888899999875 78999999999999999999
Q ss_pred EcCCHHHHHHHHHHHhhcCeEeecccCHHHHHHhcCCccccCCccccCcccchhhHH
Q 009903 461 WAPTREKAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQEL 517 (523)
Q Consensus 461 ~g~s~~ea~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (523)
+|+|+++|++++.++++.++|+|+.||++||+.++.||+|.+|.++|+||.+| +||
T Consensus 401 ~g~~~~eA~~~~~~al~~~~i~G~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~-~~~ 456 (1150)
T 3hbl_A 401 HAISFKQAEEKMVRSLREMRIRGVKTNIPFLINVMKNKKFTSGDYTTKFIEET-PEL 456 (1150)
T ss_dssp EESSHHHHHHHHHHHHHHCEEESSCCSHHHHHHHHHCHHHHHSCCCTTHHHHC-GGG
T ss_pred EeCCHHHHHHHHHHHHhceEEeCccCCHHHHHHHhCCHHHcCCCcccchhhCC-Hhh
Confidence 99999999999999999999999999999999999999999999999999988 454
No 9
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=100.00 E-value=1.3e-64 Score=535.28 Aligned_cols=444 Identities=53% Similarity=0.917 Sum_probs=399.4
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
|+|+|||+|+|.++.+++++|+++|+++++++++.+...+...++|+.+.+++....+++.|.+.+++++++.++|+|++
T Consensus 1 m~k~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~~~p~~~~~~~~d~~~l~~~~~~~~~d~v~~ 80 (449)
T 2w70_A 1 MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHP 80 (449)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHHTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHHTCCEEEC
T ss_pred CCceEEEeCCcHHHHHHHHHHHHcCCeEEEEeccccccCchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEE
Confidence 68999999999999999999999999999998777777788899999887755555567889999999999999999999
Q ss_pred CCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHH-HHHHHhcCCcEEEEe
Q 009903 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEA-VKLADELGFPVMIKA 228 (523)
Q Consensus 150 ~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~-~~~~~~~g~P~VvKP 228 (523)
++|+.+|+..+++.+++.|++++||+++++..+.||..++++|+++|||+|+++...+.+.+++ .+++++++||+||||
T Consensus 81 ~~g~~~e~~~~~~~~e~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~g~PvvvKp 160 (449)
T 2w70_A 81 GYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA 160 (449)
T ss_dssp CSSTTTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHHTCCBCSBCSSCCCSCHHHHHHHHHHHCSSEEEEE
T ss_pred CCCCcccCHHHHHHHHHcCCceECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccccCCHHHHHHHHHHHhCCcEEEEE
Confidence 9988888888889999999999999999999999999999999999999999831168888999 899999999999999
Q ss_pred CCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCceee
Q 009903 229 TAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLL 308 (523)
Q Consensus 229 ~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~~ 308 (523)
..|+||+||+++++.+|+.++++.+.......+++..+++||||+|.+|++++++.+.+|+++.+..+.+...+.+....
T Consensus 161 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 240 (449)
T 2w70_A 161 SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVV 240 (449)
T ss_dssp TTCCTTTTCEEECSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCSSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEE
T ss_pred CCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEeccCCCeEEEEEEEEcCCCCEEEEeceecccccCCccee
Confidence 99999999999999999999998887655455667899999999987899999999888899988877777777777777
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcCC
Q 009903 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (523)
Q Consensus 309 ~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G~ 388 (523)
...|++.++++..+++.+.+.++++++|+.|++++||++++ |++||||||||+++++++++.++|+|++++++++++|.
T Consensus 241 ~~~p~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~-~~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~ 319 (449)
T 2w70_A 241 EEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFEN-GEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQ 319 (449)
T ss_dssp EEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEET-TEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHHTC
T ss_pred eeCCcccCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEC-CCEEEEEEECCCCccchHHHHHhCCCHHHHHHHHHCCC
Confidence 77887668999999999999999999999999999999998 55999999999998888888889999999999999999
Q ss_pred CCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHHHH
Q 009903 389 KLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKA 468 (523)
Q Consensus 389 ~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~ea 468 (523)
+++....+....++++++++|++++ .++.|..|.+..+..+..++++++.+++.|+.+++.+++++|+|+++|+|+++|
T Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~v~~~g~~~~~a 398 (449)
T 2w70_A 320 PLSIKQEEVHVRGHAVECRINAEDP-NTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVA 398 (449)
T ss_dssp CCSSCGGGCCCCSEEEEEEEECBCT-TTCCBCCEECCEEECCCSTTEEEECCCCTTCEECSSSCSEEEEEEEEESSHHHH
T ss_pred CCCCchhccccceeEEEEeecccCc-cccCCCCCEeceEECCCCCcEEEEeccccCCEeccccCcceEEEEEEcCCHHHH
Confidence 8875444455678899999999988 788888898888866666788888889999999887788899999999999999
Q ss_pred HHHHHHHhhcCeEeecccCHHHHHHhcCCccccCCccccCcccchhh
Q 009903 469 IERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQ 515 (523)
Q Consensus 469 ~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (523)
+++++++++.+.++|..||+.+++.+|.||+|.+|.++|.||.+|++
T Consensus 399 ~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (449)
T 2w70_A 399 IARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLG 445 (449)
T ss_dssp HHHHHHHHHHCEEESSCCSHHHHHHHHTCHHHHHCCCCTTHHHHHHT
T ss_pred HHHHHHHHhhcEEeCcCCCHHHHHHHHcChhhccCCceehhhhhhhh
Confidence 99999999999999999999999999999999999999999998754
No 10
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=100.00 E-value=4.2e-66 Score=593.18 Aligned_cols=445 Identities=41% Similarity=0.719 Sum_probs=354.0
Q ss_pred CCCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 68 TCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 68 ~~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
.+|+|||||+|+|.++++++++|+++|+++++++++.+..+.+..++|+.+.+++.+..++|.+.+.+++++++.++|+|
T Consensus 28 ~~m~kkILI~grGeia~~iiraar~lGi~vVaV~s~~d~~a~~~~~ADe~~~i~p~~~~~syld~~~Il~~a~~~~iDaI 107 (1236)
T 3va7_A 28 KKPFETVLIANRGEIAVRIMKTLKRMGIKSVAVYSDPDKYSQHVTDADFSVALHGRTAAETYLDIDKIINAAKKTGAQAI 107 (1236)
T ss_dssp CCSCSEEEECCCHHHHHHHHHHHHHHTCEEEEEECSGGGGCHHHHHSSEEEECCCSSTTTTTTCHHHHHHHHHHTTCSEE
T ss_pred cCCCCEEEEEcCCHHHHHHHHHHHHCCCEEEEEEcCCCcCchhhhhCCEEEEeCCCcccccccCHHHHHHHHHHhCCCEE
Confidence 45789999999999999999999999999999998888889999999999999887888899999999999999999999
Q ss_pred EeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEE
Q 009903 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (523)
Q Consensus 148 i~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvK 227 (523)
+|++++++|+..+++.+++.|++++||+.++++.+.||..+|++|+++|||+|+++ ..+.+.+++.++++++|||+|||
T Consensus 108 ~pg~g~lsEn~~~a~~le~~Gi~~iGps~eai~~~~DK~~ak~ll~~aGIPvpp~~-~~v~s~eea~~~a~~iGyPvVVK 186 (1236)
T 3va7_A 108 IPGYGFLSENADFSDRCSQENIVFVGPSGDAIRKLGLKHSAREIAERAKVPLVPGS-GLIKDAKEAKEVAKKLEYPVMVK 186 (1236)
T ss_dssp ECCSSGGGGCHHHHHHHHTTTCEESSCCHHHHHHHHSTTHHHHHHHHTTCCCCC--------------------------
T ss_pred EECCccccccHHHHHHHHHCCCCeeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCee-EecCCHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999853 57889999999999999999999
Q ss_pred eCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCcee
Q 009903 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKL 307 (523)
Q Consensus 228 P~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~ 307 (523)
|..|+||+||++|++.+|+.++++.+.......+++..++|||||+|.+|++++++.|++|+++.+++++|+.++++.+.
T Consensus 187 P~~GgGGkGV~iv~s~eEL~~a~~~~~~~a~~~~~~~~vlVEeyI~G~rEisV~vl~Dg~g~vv~l~~rd~s~qr~~~k~ 266 (1236)
T 3va7_A 187 STAGGGGIGLQKVDSEDDIERVFETVQHQGKSYFGDAGVFMERFVNNARHVEIQMMGDGFGKAIAIGERDCSLQRRNQKV 266 (1236)
T ss_dssp ----------------------------------------------CCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEE
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhccCCCcEEEeeccCCCeEEEEEEEecCCceEEEEeeeeeeeeecCcce
Confidence 99999999999999999999999988766555566788999999999899999999999999999999999999999999
Q ss_pred eEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCC-CCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHc
Q 009903 308 LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDER-GSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAM 386 (523)
Q Consensus 308 ~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~-G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~ 386 (523)
....|++.++++..++|.+.+.++++++|+.|++++||+++++ |++||||||||++++++++++++|+|++++++++++
T Consensus 267 ~e~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~VEfivd~d~g~~y~iEINpRl~g~~~~te~vtGvDlv~~~l~~a~ 346 (1236)
T 3va7_A 267 IEETPAPNLPEATRAKMRAASERLGSLLKYKCAGTVEFIYDEQRDEFYFLEVNARLQVEHPITEMVTGLDLVEWMLRIAA 346 (1236)
T ss_dssp EEEESCSSCCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHT
T ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECCCCcEEEEEEECCCCCccHHHHHHHCCCHHHHHHHHHC
Confidence 9999998799999999999999999999999999999999964 779999999999999999999999999999999999
Q ss_pred CCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHH
Q 009903 387 GGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRE 466 (523)
Q Consensus 387 G~~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~ 466 (523)
|++++.........++++.+++|++++.++|.|.+|.+..+..+. +++++..++.|+.|++++|+++|+|+++|+|++
T Consensus 347 G~~l~~~~~~~~~~g~Ai~~riyaedp~~~f~p~~G~i~~~~~p~--gvrvd~~v~~G~~V~~~yds~la~vi~~g~~r~ 424 (1236)
T 3va7_A 347 NDSPDFDNTKIEVSGASIEARLYAENPVKDFRPSPGQLTSVSFPS--WARVDTWVKKGTNVSAEYDPTLAKIIVHGKDRN 424 (1236)
T ss_dssp TCCCCGGGCCCCCCSEEEEEEEESEETTTTTEECCEECCEEECCT--TSEEEECCCTTCEECSSSCCEEEEEEEEESSHH
T ss_pred CCCCCCccccccccceEEEEEEecCCcccccCCCCceEEEEEcCC--ccEecccccCCCEeCCCCCCceEEEEEEeCCHH
Confidence 999887665667789999999999999999999999999887654 488888999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCeEeecccCHHHHHHhcCCccccCCccccCcccchhh
Q 009903 467 KAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQ 515 (523)
Q Consensus 467 ea~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (523)
+|+++++++++.++|+|+.||++|++.++.||+|.+|.++|.||.++..
T Consensus 425 eA~~~~~~al~~~~i~G~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~ 473 (1236)
T 3va7_A 425 DAIMKLNQALNETAVYGCITNIDYLRSIASSKMFKEAKVATKVLDSFDY 473 (1236)
T ss_dssp HHHHHHHHHHHTCEEESSCCSHHHHHHHHHCHHHHHTCCCTTGGGGCCC
T ss_pred HHHHHHHHHhhCEEEeCcccCHHHHHHHhCCHHHhCCCCcchhhhhcCc
Confidence 9999999999999999999999999999999999999999999998753
No 11
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=100.00 E-value=2e-63 Score=527.72 Aligned_cols=449 Identities=47% Similarity=0.790 Sum_probs=398.2
Q ss_pred cCCCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCC-CCCCCCCCHHHHHHHHHHcCCC
Q 009903 67 VTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEA-PSSQSYLLIPNVLSAAISRGCT 145 (523)
Q Consensus 67 ~~~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~-~~~~~~~~~~~l~~~~~~~~id 145 (523)
...|+|+|||+|+|..+.+++++|+++|+++++++++.+..+++..++|+.+.+++. ...++|.|.+.+++++++.++|
T Consensus 2 ~~~~~k~ILI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~y~d~~~l~~~~~~~~id 81 (461)
T 2dzd_A 2 ETRRIRKVLVANRGEIAIRVFRACTELGIRTVAIYSKEDVGSYHRYKADEAYLVGEGKKPIEAYLDIEGIIEIAKAHDVD 81 (461)
T ss_dssp -CCCCSEEEECSCHHHHHHHHHHHHHHTCEEEEEECGGGTTCTHHHHSSSEEECSTTSCTTGGGTCHHHHHHHHHHTTCC
T ss_pred CCCcCcEEEEECCcHHHHHHHHHHHHcCCEEEEEECCcccccchhhhCCEEEEcCCCCCccccccCHHHHHHHHHHhCCC
Confidence 345789999999999999999999999999999987777767788899999887532 2234578899999999999999
Q ss_pred EEEeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEE
Q 009903 146 MLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVM 225 (523)
Q Consensus 146 ~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~V 225 (523)
+|++++|+.+|+..+++.+++.|++++||+++++..+.||..++++|+++|||+|+++...+.+.+++.+++++++||+|
T Consensus 82 ~v~~~~g~~~E~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~g~Pvv 161 (461)
T 2dzd_A 82 AIHPGYGFLSENIQFAKRCREEGIIFIGPNENHLDMFGDKVKARHAAVNAGIPVIPGSDGPVDGLEDVVAFAEAHGYPII 161 (461)
T ss_dssp EEECCSSSSTTCHHHHHHHHHTTCEESSCCHHHHHHTTSHHHHHHHHHHTTCCBCCBCSSCCSSHHHHHHHHHHHCSCEE
T ss_pred EEEECCCccccCHHHHHHHHHcCCEEECCCHHHHHHhhCHHHHHHHHHHcCCCCCCCcccCcCCHHHHHHHHHhcCCcEE
Confidence 99999988888888889999999999999999999999999999999999999999831168899999999999999999
Q ss_pred EEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCc
Q 009903 226 IKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQ 305 (523)
Q Consensus 226 vKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~ 305 (523)
|||..|+||+||+++++.+|+.++++.+.......+++..++|||||+|.+|++++++.+++|+++.+.++.+..++.+.
T Consensus 162 vKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~ 241 (461)
T 2dzd_A 162 IKAALGGGGRGMRIVRSKSEVKEAFERAKSEAKAAFGSDEVYVEKLIENPKHIEVQILGDYEGNIVHLYERDCSVQRRHQ 241 (461)
T ss_dssp EEESTTCSSSSEEEECCGGGHHHHHHHHHHHHHHHTSCCCEEEEECCCSCEEEEEEEEECTTCCEEEEEEEEEEEEETTE
T ss_pred EEeCCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEECCCCCeEEEEEEEEcCCCCEEEEEecccccccccc
Confidence 99999999999999999999999999887665555667899999999997899999999988899887777777777777
Q ss_pred eeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHH
Q 009903 306 KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVA 385 (523)
Q Consensus 306 ~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~ 385 (523)
......|++.++++..+++.+.+.++++++|+.|++++||++++ |++||||||||+++.+++++.++|+|+++++++++
T Consensus 242 ~~~~~~P~~~l~~~~~~~i~~~a~~~~~~lg~~g~~~ve~~~~~-~~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~ 320 (461)
T 2dzd_A 242 KVVEVAPSVSLSDELRQRICEAAVQLMRSVGYVNAGTVEFLVSG-DEFYFIEVNPRIQVEHTITEMITGIDIVQSQILIA 320 (461)
T ss_dssp EEEEEESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEET-TEEEEEEEESSCCGGGHHHHHHHCCCHHHHHHHHH
T ss_pred ceEEECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEeC-CCEEEEEEECCCCCceeeEEeecCCCHHHHHHHHH
Confidence 77788888669999999999999999999999999999999998 56999999999988777888889999999999999
Q ss_pred cCCCCCCCc------cccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeee-cCCcccCCCCCcceEEE
Q 009903 386 MGGKLRYKQ------EDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHV-YPDYVVPPSYDSLLGKL 458 (523)
Q Consensus 386 ~G~~~~~~~------~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~-~~G~~v~~~~~~~iG~v 458 (523)
+|.+++... ......|+++.++++++++..+|.|.+|.+..+..+..++++++..+ ..|++|++++|+++|+|
T Consensus 321 ~G~~l~~~~~~~~~~~~~~~~g~~~~~ri~~~~~~~~~~p~~g~i~~~~~~~~~~v~~~~~~~~~G~~i~~~~~~~~~~v 400 (461)
T 2dzd_A 321 DGCSLHSHEVGIPKQEDIRINGYAIQSRVTTEDPLNNFMPDTGKIMAYRSGGGFGVRLDAGNGFQGAVITPYYDSLLVKL 400 (461)
T ss_dssp TTCCTTSTTTCCCCGGGCCCCSEEEEEEEESEEGGGTTEECCEECSEEECCCCTTEEEEESSCSTTCEECSSSCCEEEEE
T ss_pred cCCCccccccccccccccccceeEEEeeecccCCccCccCCCCeeeEEecCCCCCeEeecccccCCCCcCcccchhhhee
Confidence 998876421 11345789999999998887778788898888877766788886654 68999999999999999
Q ss_pred EEEcCCHHHHHHHHHHHhhcCeEeecccCHHHHHHhcCCccccCCccccCcccchhhHH
Q 009903 459 IVWAPTREKAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQEL 517 (523)
Q Consensus 459 i~~g~s~~ea~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (523)
+++|+|+++|+++++++++.|.|+|+.||+.++..++.||+|.+|.++|.||.+|. +|
T Consensus 401 ~~~g~~~~~a~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 458 (461)
T 2dzd_A 401 STWALTFEQAARKMLRNLREFRIRGIKTNIPFLENVVQHPKFLSGEYDTSFIDTTP-EL 458 (461)
T ss_dssp EEEESSHHHHHHHHHHHHHTCEEESSCCSHHHHHHHHHSHHHHTSCCCTTHHHHCG-GG
T ss_pred EEEcCCHHHHHHHHHHHHHhcEEeCCcCCHHHHHHHhCChhhhCCCccchhhhcch-hh
Confidence 99999999999999999999999999999999999999999999999999999984 44
No 12
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A
Probab=100.00 E-value=5e-62 Score=527.06 Aligned_cols=441 Identities=33% Similarity=0.556 Sum_probs=387.4
Q ss_pred CCCccEEEEEcCcHHHHHHHHHHHHcCC---------cEEEEec--CCCCCCccccccCeeEEcCCCCCCCCCCCHHHHH
Q 009903 68 TCRQEKILVANRGEIAVRVIRTAHEMGI---------PCVAVYS--TIDKDALHVKLADESVCIGEAPSSQSYLLIPNVL 136 (523)
Q Consensus 68 ~~~~k~ILi~g~g~~~~~vi~aa~~~G~---------~vi~v~~--~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~ 136 (523)
.+|+|+|||+|+|..+++++++|+++|+ +++++.+ +.++.+++..++|+.+.+++....++|.|.+.++
T Consensus 44 ~~~~kkILI~g~g~~a~~iira~~~~G~~vi~~d~gi~~v~v~s~~D~~~~~~~~~~aD~~~~ip~~~~~~~y~d~~~l~ 123 (554)
T 1w96_A 44 HTVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDLIV 123 (554)
T ss_dssp CBCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHHHH
T ss_pred cccccEEEEECCCHHHHHHHHHHHHcCCcceecccCceEEEEecccccccCChhhhhCCEEEEcCCCCccccccCHHHHH
Confidence 4578999999999999999999999965 4456653 2236677889999999886556667889999999
Q ss_pred HHHHHcCCCEEEeCCCcccccHHHHHHHHHcC--CceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCc---------
Q 009903 137 SAAISRGCTMLHPGYGFLAENAVFVEMCREHG--INFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDG--------- 205 (523)
Q Consensus 137 ~~~~~~~id~Vi~~~g~~~e~~~~a~~~~~~g--l~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~--------- 205 (523)
+++++.++|+|++++|+++|+..++..+++.| ++++||+.+++..+.||..++++|+++|||+|++...
T Consensus 124 ~~a~~~~id~Vi~g~G~~sE~~~~~~~l~~~g~~i~~~gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~ 203 (554)
T 1w96_A 124 DIAERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDE 203 (554)
T ss_dssp HHHHHTTCSEEECCSSTTTTCTHHHHHHHHSTTCCEESSCCHHHHHHSCSHHHHHHHHHHTTCCBCCBTTTTCCCCEECT
T ss_pred HHHHHhCCCEEEECCCccccCHHHHHHHHHcCCeEEEeCCCHHHHHHHhCHHHHHHHHHHCCCCcCCccccccccccccc
Confidence 99999999999999999888888888899999 9999999999999999999999999999999998321
Q ss_pred ---------------cCCCHHHHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEee
Q 009903 206 ---------------LLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEK 270 (523)
Q Consensus 206 ---------------~~~s~~e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe 270 (523)
.+.+.+++.++++++|||+||||..|+||+||+++++.+|+.++++.+.... ....++|||
T Consensus 204 ~~~l~~ip~~~~~~~~~~~~~e~~~~~~~~g~PvVvKp~~g~gg~Gv~~v~~~~el~~a~~~~~~~~----~~~~vlvEe 279 (554)
T 1w96_A 204 KTGLVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEI----PGSPIFIMK 279 (554)
T ss_dssp TTCCEECCHHHHGGGSCSSHHHHHHHHHHHCSSEEEEETTCCTTTTEEEECSHHHHHHHHHHHHHHS----TTCCEEEEE
T ss_pred cccccccccccccccCCCCHHHHHHHHHHcCCCEEEEECCCCCCceEEEECCHHHHHHHHHHHHhhc----cCCCEEEEE
Confidence 1378899999999999999999999999999999999999999998876542 247899999
Q ss_pred ccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEe-C
Q 009903 271 YVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLD-E 349 (523)
Q Consensus 271 fI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~-~ 349 (523)
||+|++|++++++.++.|+++.+..+++..++.+.+.....|++.++++..+++.+++.++++++|+.|++++||+++ +
T Consensus 280 ~i~g~~e~sv~vl~d~~G~vv~l~~~~~~~~~~~~k~~~~~P~~~l~~~~~~~i~~~a~~~~~alg~~G~~~ve~~~~~~ 359 (554)
T 1w96_A 280 LAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYSHD 359 (554)
T ss_dssp CCCSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEESCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEECTT
T ss_pred ecCCCcEEEEEEEEcCCCCEEEEeeeeeeeEeeccceeeeCCCcCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECC
Confidence 999768999999999878999888887777777666667778766899999999999999999999999999999998 7
Q ss_pred CCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcCCCCCCCc-----------------------------cccccc
Q 009903 350 RGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKLRYKQ-----------------------------EDIVLQ 400 (523)
Q Consensus 350 ~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G~~~~~~~-----------------------------~~~~~~ 400 (523)
+|++||||||||+++++++++.++|+|++++++++++|.+++..+ ......
T Consensus 360 dg~~~~iEiN~R~~g~~~~~~~~~G~dl~~~~~~~a~G~~l~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 439 (554)
T 1w96_A 360 DGKFYFLELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEFKTQDATKKQRRPIPK 439 (554)
T ss_dssp TCCEEEEEEECSCCTTTHHHHHHHCCCHHHHHHHHHTTCCGGGCHHHHHHTTCCTTCCCCCCTTCCSHHHHHHCCCCCCC
T ss_pred CCCEEEEEeeCCCCcceehhhhhcCCCHHHHHHHHHcCCCcccccchhhhccCCccccccccccccccccccccccCCCC
Confidence 888999999999999888888889999999999999999875321 023467
Q ss_pred eeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHHHHHHHHHHHhhcCe
Q 009903 401 GHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALNDTI 480 (523)
Q Consensus 401 ~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~ea~~~~~~~~~~i~ 480 (523)
++++.+++|++++.++|.|.+|.+..+..+..++++++..+..|+.|++++++++|+|+++|+|+++|+++++++++.+.
T Consensus 440 g~~i~~r~~~~~~~~~~~p~~G~i~~~~~~~~~~v~~~~~~~~g~~i~~~~~~~~~~vi~~g~~~~eA~~~~~~al~~i~ 519 (554)
T 1w96_A 440 GHCTACRITSEDPNDGFKPSGGTLHELNFRSSSNVWGYFSVGNNGNIHSFSDSQFGHIFAFGENRQASRKHMVVALKELS 519 (554)
T ss_dssp SEEEEEEEEEECCCCSSCCCSSSEEEECCSSCSSEEEEEEECCSCSSCSSCSEEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEEEccCCCCCcccCCeEEeEEecCCCCCEEEeeecccCCccCCCCCCceEEEEEEeCCHHHHHHHHHHHHhccE
Confidence 88999999999999999999999988865556778777788899999998898999999999999999999999999999
Q ss_pred Eee-cccCHHHHHHhcCCccccCCccccCcccc
Q 009903 481 ITG-VPTTIEYHKLILDVEDFKNGKVDTAFIPK 512 (523)
Q Consensus 481 i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (523)
|+| +.||++||+.+|.||+|.+|.++|.||.+
T Consensus 520 i~g~~~~~i~~~~~~~~~~~f~~~~~~t~~~~~ 552 (554)
T 1w96_A 520 IRGDFRTTVEYLIKLLETEDFEDNTITTGWLDD 552 (554)
T ss_dssp TCC----CCHHHHHHHTSHHHHTTCCCTTHHHH
T ss_pred EEeeccCCHHHHHHHhcCHhhhcCCccchHhhh
Confidence 999 99999999999999999999999999965
No 13
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=100.00 E-value=2.7e-63 Score=570.45 Aligned_cols=449 Identities=46% Similarity=0.767 Sum_probs=347.8
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCC-------CCCCCCCCHHHHHHHHHH
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEA-------PSSQSYLLIPNVLSAAIS 141 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~-------~~~~~~~~~~~l~~~~~~ 141 (523)
-|++||||.++|+++++++++|+++|+++++++++.+..+.+..++|+.+.+++. ...++|.|.+.|++++++
T Consensus 12 ~~~~~~lianrGeia~riiraa~elGi~vvav~s~~d~~a~~~~~ADe~~~i~~~~~~~~~~~~~~~yld~~~I~~~a~~ 91 (1165)
T 2qf7_A 12 GPISKILVANRSEIAIRVFRAANELGIKTVAIWAEEDKLALHRFKADESYQVGRGPHLARDLGPIESYLSIDEVIRVAKL 91 (1165)
T ss_dssp CCCCEEEECCCHHHHHHHHHHHHHTTCEEEEEECGGGTTCHHHHSSSSEEECSCSTTSSSCCCTTHHHHCHHHHHHHHHH
T ss_pred CcceEEEEcCCcHHHHHHHHHHHHcCCEEEEEECCCcccchhHHhCCEEEEcCCcccccccCCccccccCHHHHHHHHHH
Confidence 4789999999999999999999999999999998888777888999999988653 334567789999999999
Q ss_pred cCCCEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcC
Q 009903 142 RGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELG 221 (523)
Q Consensus 142 ~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g 221 (523)
.++|+|+|++|+++|+..+++.+++.|++++||+++++..+.||..++++|+++|||+|+++...+.+.+++.++++++|
T Consensus 92 ~~iD~V~pg~g~lsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GIPvp~~~~~~v~s~eea~~~a~~ig 171 (1165)
T 2qf7_A 92 SGADAIHPGYGLLSESPEFVDACNKAGIIFIGPKADTMRQLGNKVAARNLAISVGVPVVPATEPLPDDMAEVAKMAAAIG 171 (1165)
T ss_dssp HTCSEEECCSSTTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBC---------------------
T ss_pred hCCCEEEECCCchhcCHHHHHHHHHcCCceECCCHHHHHHHCCHHHHHHHHHHcCCCCCCeeCcCCCCHHHHHHHHHhcC
Confidence 99999999999999998899999999999999999999999999999999999999999983116788999999999999
Q ss_pred CcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeee
Q 009903 222 FPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQ 301 (523)
Q Consensus 222 ~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~ 301 (523)
||+||||..|+||+||++|++.+|+.++++.+..+....|++..++||+||+|++|++++++.|++|+++.+.+++++.+
T Consensus 172 yPvVVKp~~g~GG~Gv~iv~s~eEL~~a~~~~~~~a~~~fg~~~vlVEefI~gg~EisV~vl~D~~G~vv~l~~r~~s~~ 251 (1165)
T 2qf7_A 172 YPVMLKASWGGGGRGMRVIRSEADLAKEVTEAKREAMAAFGKDEVYLEKLVERARHVESQILGDTHGNVVHLFERDCSVQ 251 (1165)
T ss_dssp ------------------------------------------------CCCSSEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEeccCCcEEEEEEEEcCCCcEEEEEeecccce
Confidence 99999999999999999999999999999887766555566788999999996699999999998899998888888888
Q ss_pred ecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEe-CCCCEEEEEEecCCCCCccceeeecCCCHHHH
Q 009903 302 RRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLD-ERGSFYFMEMNTRIQVEHPVTEMISSVDLIEE 380 (523)
Q Consensus 302 ~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~-~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~ 380 (523)
+.+.+.....|++.++++..+++.+.+.++++++||.|++++||+++ ++|++||||||||+++.+++++.++|+|++++
T Consensus 252 r~~~~~~e~~Pa~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~vd~~dg~~~~iEiNpR~~~~~~vte~~tGiDl~~~ 331 (1165)
T 2qf7_A 252 RRNQKVVERAPAPYLSEAQRQELAAYSLKIAGATNYIGAGTVEYLMDADTGKFYFIEVNPRIQVEHTVTEVVTGIDIVKA 331 (1165)
T ss_dssp ETTEEEEEEESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHH
T ss_pred ecccceEEecccccCCHHHHHHHHHHHHHHHHHcCCCcceeEEEEEECCCCCEEEEEEEcCCCCCchhhhhhhCCCHHHH
Confidence 88888888899877999999999999999999999999999999999 88889999999999988888888999999999
Q ss_pred HHHHHcCCCCCCC------ccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeee-cCCcccCCCCCc
Q 009903 381 QIHVAMGGKLRYK------QEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHV-YPDYVVPPSYDS 453 (523)
Q Consensus 381 ~~~~~~G~~~~~~------~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~-~~G~~v~~~~~~ 453 (523)
++++++|.+++.. +.++...++++.++++++++..+|.|..|.|..+..+..++++++... +.|+.|++++|+
T Consensus 332 ~i~~a~G~~l~~~~~g~p~q~~~~~~g~Ai~~ri~ae~P~~~f~p~~G~I~~~~~~~~~gvrvd~g~~~~G~~v~~~~d~ 411 (1165)
T 2qf7_A 332 QIHILDGAAIGTPQSGVPNQEDIRLNGHALQCRVTTEDPEHNFIPDYGRITAYRSASGFGIRLDGGTSYSGAIITRYYDP 411 (1165)
T ss_dssp HHHHHTTCCTTSGGGTCCCGGGCCCCSEEEEEEEESEETTTTTEECCEECCEEECCCCTTEEEECCSCCTTCEECSSSCC
T ss_pred HHHHHcCCCccccccccccccccccCcEEEEEEEEecCCccCcCCCCcEEEEEecCCCCceEeeeccCCCCCEeCCCCCC
Confidence 9999999987632 223456789999999999998899999999988876666789988655 679999999999
Q ss_pred ceEEEEEEcCCHHHHHHHHHHHhhcCeEeecccCHHHHHHhcCCccccCCccccCcccchhhHH
Q 009903 454 LLGKLIVWAPTREKAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQEL 517 (523)
Q Consensus 454 ~iG~vi~~g~s~~ea~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (523)
++|+|+++|+|+++|+++++++++.+.|+|+.||++|++.++.||+|.+|.++|.||.+|.+.|
T Consensus 412 ~l~~vi~~g~t~~eA~~~~~~al~~i~i~G~~tni~~~~~~~~~~~f~~~~~~t~~~~~~~~~~ 475 (1165)
T 2qf7_A 412 LLVKVTAWAPNPLEAISRMDRALREFRIRGVATNLTFLEAIIGHPKFRDNSYTTRFIDTTPELF 475 (1165)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHHCEEESSCCSHHHHHHHHTSHHHHTTCCCTTTTTTCGGGG
T ss_pred ceEEEEEEeCCHHHHHHHHHHHhhcEEEecccCCHHHHHHHhcCHHhhcCCccchhhhcChhhh
Confidence 9999999999999999999999999999999999999999999999999999999999995444
No 14
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=100.00 E-value=3.7e-50 Score=418.80 Aligned_cols=384 Identities=15% Similarity=0.205 Sum_probs=313.6
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
+++|||+|+|..++.++++|+++|+++++++. .+...++..++|+.+.++ +.|.+.+++++++.++|+|+++
T Consensus 7 ~~~ilI~g~g~~~~~~~~a~~~~G~~~v~v~~-~~~~~~~~~~ad~~~~~~-------~~d~~~l~~~~~~~~~d~v~~~ 78 (403)
T 4dim_A 7 NKRLLILGAGRGQLGLYKAAKELGIHTIAGTM-PNAHKPCLNLADEISYMD-------ISNPDEVEQKVKDLNLDGAATC 78 (403)
T ss_dssp CCEEEEECCCGGGHHHHHHHHHHTCEEEEEEC-SSCCHHHHHHCSEEEECC-------TTCHHHHHHHTTTSCCSEEECC
T ss_pred CCEEEEECCcHhHHHHHHHHHHCCCEEEEEcC-CCCCCcchhhCCeEEEec-------CCCHHHHHHHHHHcCCCEEEeC
Confidence 67999999999999999999999999999953 444567788999998874 7789999999999999999986
Q ss_pred CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeCC
Q 009903 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (523)
Q Consensus 151 ~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~~ 230 (523)
++..+...++++++++|+ +||+++++..++||..++++|+++|||+|++ ..+.+.+++.++++++|||+||||..
T Consensus 79 -~~~~~~~~~a~~~~~~gl--~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp~~ 153 (403)
T 4dim_A 79 -CLDTGIVSLARICDKENL--VGLNEEAAIMCGDKYKMKEAFKKYNVNTARH--FVVRNENELKNALENLKLPVIVKATD 153 (403)
T ss_dssp -SCSTTHHHHHHHHHHHTC--SSCCHHHHHHHHCHHHHHHHHHHHTCCCCCE--ECCCSHHHHHHHHHTSCSSEEEECSC
T ss_pred -CcchhHHHHHHHHHHcCc--CCCCHHHHHHHhCHHHHHHHHHHcCCCCCCE--EEeCCHHHHHHHHhcCCCCEEEEECC
Confidence 444456678889999998 4899999999999999999999999999999 78999999999999999999999999
Q ss_pred CCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeec--Cceee
Q 009903 231 GGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRR--NQKLL 308 (523)
Q Consensus 231 g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~--~~~~~ 308 (523)
|+||+||+++++.+|+.++++.+.... .++.+++||||+| .|++++++.. +|++..+.......... .....
T Consensus 154 g~gg~Gv~~v~~~~el~~~~~~~~~~~----~~~~~lvEe~i~g-~e~sv~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 227 (403)
T 4dim_A 154 LQGSKGIYIAKKEEEAIDGFNETMNLT----KRDYCIVEEFIEG-YEFGAQAFVY-KNDVLFVMPHGDETYMSHTAVPVG 227 (403)
T ss_dssp C-----CEEESSHHHHHHHHHHHHHHC----SSSCCEEEECCCS-EEEEEEEEEE-TTEEEEEEEEEEEEEESSSEEEEE
T ss_pred CCCCCCEEEECCHHHHHHHHHHHHhcC----cCCcEEEEEccCC-cEEEEEEEEE-CCEEEEEEEecceeccCCCCccee
Confidence 999999999999999999999876553 3478999999999 9999999975 56776654332221111 22234
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHcCCcc-ccEEEEEEeCCCCEEEEEEecCCCCCc--cceeeecCCCHHHHHHHHH
Q 009903 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIG-VGTVEFLLDERGSFYFMEMNTRIQVEH--PVTEMISSVDLIEEQIHVA 385 (523)
Q Consensus 309 ~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G-~~~vE~~~~~~G~~~liEiNpR~~g~~--~~~~~~~Gidl~~~~~~~~ 385 (523)
...|.. ++++..+++.+.+.+++++||+.| ++|+||++++ |++||+|||||++++. .+++.++|+|+++++++++
T Consensus 228 ~~~p~~-l~~~~~~~l~~~a~~~~~~lg~~gg~~~ve~~~~~-~~~~~iEiN~R~~~~~~~~~~~~~~G~d~~~~~~~~~ 305 (403)
T 4dim_A 228 HYVPLD-VKDDIIEKTKTEVKKAIKALGLNNCAVNVDMILKD-NEVYIIELTGRVGANCLPELVEINYGIEYYKMIASMA 305 (403)
T ss_dssp EEESCC-SCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEET-TEEEEEEEESSCCSTTHHHHHHHHHTSCHHHHHHHHH
T ss_pred EEeCCC-CCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEEEEC-CcEEEEEEcCCCCCCcHHHHHHHHhCcCHHHHHHHHH
Confidence 456776 999999999999999999999996 9999999984 5699999999999874 4678889999999999999
Q ss_pred cCCCC-CCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCC--cE-EEeeeecCCcccCCCCCc--ceEEEE
Q 009903 386 MGGKL-RYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGP--FV-RMDSHVYPDYVVPPSYDS--LLGKLI 459 (523)
Q Consensus 386 ~G~~~-~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~--~v-~~~~~~~~G~~v~~~~~~--~iG~vi 459 (523)
+|.++ +..+......+ ++.++++. +.+.+|.+..+..+... .+ .++..+.+|+.+++.+|+ ++|+|+
T Consensus 306 ~G~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~G~i~~~~~~~~~~~~v~~~~~~~~~G~~v~~~~d~~~~~g~vi 378 (403)
T 4dim_A 306 ISENPLVFWSQKSKENK-AGLARMII------ETEKSGILKEILNSNAKDDDIVEITFFKEENDEIKKFENSNDCIGQII 378 (403)
T ss_dssp TTCCTHHHHTTCCSSCC-EEEEEEEC------CSSCCEEEEEEEECCCCCTTEEEEEECCCTTCEECCSCSGGGCCEEEE
T ss_pred cCCCccccccccccccc-cceEEEEE------ecCCCeEEEeeecccccCCCeEEEEEEcCCCCEeCCCCCCCceeEEEE
Confidence 99987 33322222233 34455542 45778999888544333 33 346788899999998887 899999
Q ss_pred EEcCCHHHHHHHHHHHhhcCeEe
Q 009903 460 VWAPTREKAIERMKRALNDTIIT 482 (523)
Q Consensus 460 ~~g~s~~ea~~~~~~~~~~i~i~ 482 (523)
++|+|+++|.++++++++.++|+
T Consensus 379 ~~~~~~~~a~~~~~~~~~~~~i~ 401 (403)
T 4dim_A 379 VKEETLDKCKDKLDVIINNINII 401 (403)
T ss_dssp EEESSHHHHHHHHHHHHTTEEEE
T ss_pred EEeCCHHHHHHHHHHHhccEEEE
Confidence 99999999999999999999875
No 15
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=100.00 E-value=2.3e-48 Score=408.05 Aligned_cols=389 Identities=14% Similarity=0.171 Sum_probs=303.7
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCH----HHHHHHHHHcCC
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLI----PNVLSAAISRGC 144 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~----~~l~~~~~~~~i 144 (523)
.+.|+|+|+|+|.....++++|+++|+++++++++++..+.....+|+++.++ .+.|. +.+.+++++.++
T Consensus 3 ~~~k~l~Il~~~~~~~~i~~aa~~lG~~vv~v~~~~~~~~~~~~~~d~~~~~~------~~~d~~~~~~~~~~~~~~~~i 76 (425)
T 3vot_A 3 KRNKNLAIICQNKHLPFIFEEAERLGLKVTFFYNSAEDFPGNLPAVERCVPLP------LFEDEEAAMDVVRQTFVEFPF 76 (425)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTCEEEEEEETTSCCCCSCTTEEEEEEEC------TTTCHHHHHHHHHHHHHHSCC
T ss_pred CCCcEEEEECCChhHHHHHHHHHHCCCEEEEEECCCcccccCHhhccEEEecC------CCCCHHHHHHHHHHhhhhcCC
Confidence 34689999999988889999999999999999888777777778889888775 24443 455566778899
Q ss_pred CEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcE
Q 009903 145 TMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPV 224 (523)
Q Consensus 145 d~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~ 224 (523)
|+|++..+. .....+.+++.+|++ |++++++..++||..||++|+++|||+|++ ..+.+.+++.+ +++|||+
T Consensus 77 d~V~~~~e~--~~~~~a~l~e~lglp--g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~--~~~g~P~ 148 (425)
T 3vot_A 77 DGVMTLFEP--ALPFTAKAAEALNLP--GLPFTTMENCRNKNKTRSILQQNGLNTPVF--HEFHTLADLEN--RKLSYPL 148 (425)
T ss_dssp SEEECCCGG--GHHHHHHHHHHTTCS--SCCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEESSGGGGTT--CCCCSSE
T ss_pred CEEEECCch--hHHHHHHHHHHcCCC--CCCHHHHHHhhCHHHHHHHHHHCCCCCCce--eccCcHHHHHH--hhcCCcE
Confidence 999987643 234556778899986 899999999999999999999999999999 77888888753 5789999
Q ss_pred EEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHH-----HhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEe--eec
Q 009903 225 MIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAA-----AAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFG--ERD 297 (523)
Q Consensus 225 VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~-----~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~--~~~ 297 (523)
||||..|+||+||++|++.+|+.++++.+..... ...++..+++|+||+| .||+++++.+ +|++..+. .+.
T Consensus 149 vvKp~~g~gs~Gv~~v~~~~el~~a~~~~~~~~~~~~~~~~~~~~~~lvEe~i~G-~e~sv~~~~~-~g~~~~~~~~~~~ 226 (425)
T 3vot_A 149 VVKPVNGFSSQGVVRVDDRKELEEAVRKVEAVNQRDLNRFVHGKTGIVAEQFIDG-PEFAIETLSI-QGNVHVLSIGYKG 226 (425)
T ss_dssp EEEESCC-----CEEECSHHHHHHHHHHHHHHTTSSHHHHHTTCCCEEEEECCCS-CEEEEEEEEE-TTEEEEEEEEEEE
T ss_pred EEEECCCCCCCCceEechHHHHHHHHHHHHhhhhhhhhhhccCCCcEEEEEEecC-cEEEEEEEEe-CCcEEEEeEEEEe
Confidence 9999999999999999999999999988764321 1124578999999999 9999999986 45655443 333
Q ss_pred eeeeecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCc-cccEEEEEEeCCCCEEEEEEecCCCCC---ccceeeec
Q 009903 298 CSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYI-GVGTVEFLLDERGSFYFMEMNTRIQVE---HPVTEMIS 373 (523)
Q Consensus 298 ~~~~~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~-G~~~vE~~~~~~G~~~liEiNpR~~g~---~~~~~~~~ 373 (523)
......+.......|++ ++++..+++.+.+.+++++||+. |++|+||+++++|++||||||||+||+ +.+++.++
T Consensus 227 ~~~~~~~~~~~~~~Pa~-l~~~~~~~i~~~~~~~~~alg~~~G~~~ve~~~~~dG~~~~iEiN~R~gG~~~~~~l~~~~~ 305 (425)
T 3vot_A 227 NSKGPFFEEGVYIAPAQ-LKEETRLAIVKEVTGAVSALGIHQGPAHTELRLDKDGTPYVIEVGARIGGSGVSHYIVKEST 305 (425)
T ss_dssp CCCCSBCCCCEEEESCC-CCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEECTTCCEEEEEEESSCGGGGHHHHHHHHHH
T ss_pred ccCCCccccceEeeccc-CCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEEEeCCcEEEEEEecCCCCCCchHHHHHHHH
Confidence 33333444555667887 99999999999999999999997 999999999999999999999999876 34678889
Q ss_pred CCCHHHHHHHHHcCCCCCCCcc-ccccceeEEEEEEeeCCCCCCCCCCCceEEEEe----cCCCCcE-EEeeeecCCccc
Q 009903 374 SVDLIEEQIHVAMGGKLRYKQE-DIVLQGHSIECRINAEDPFKNFRPGPGRITAYL----PAGGPFV-RMDSHVYPDYVV 447 (523)
Q Consensus 374 Gidl~~~~~~~~~G~~~~~~~~-~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~----~~~~~~v-~~~~~~~~G~~v 447 (523)
|+|+++++++.++|........ ......++....+. .+.+|.+..+. ....|++ ++.....+|+.+
T Consensus 306 G~d~~~~~i~~alg~~~~~~~~~~~~~~~~~~~~~~~--------~~~~G~~~~i~g~~~~~~~p~v~~~~~~~~~G~~v 377 (425)
T 3vot_A 306 GINFMQLVLQNALKPLESSEFEGEIRPVRTAGNYIIP--------VQGSGTFEKIDGLEEVKQRQEVKRVFQFMRRGAKI 377 (425)
T ss_dssp CCCHHHHHHHHHHSCCCGGGSCSCCCCSSEEEEEECC--------CCSCEEEEEEETHHHHHTCTTEEEEEECCCTTCEE
T ss_pred CCCHHHHHHHHHCCCccccccccccccceEEEEEEEc--------CCCCeEEEecCCHHHHhcCCCeEEEEEEecCCCEe
Confidence 9999999999999975433221 12222333333222 23468877762 2234665 566777889999
Q ss_pred CCC--CCcceEEEEEEcCCHHHHHHHHHHHhhcCeEe
Q 009903 448 PPS--YDSLLGKLIVWAPTREKAIERMKRALNDTIIT 482 (523)
Q Consensus 448 ~~~--~~~~iG~vi~~g~s~~ea~~~~~~~~~~i~i~ 482 (523)
.+. +++++|+|+++|+|+++|.++++++.+.|+|.
T Consensus 378 ~~~~~~~~~~g~v~~~g~~~~ea~~~~~~~~~~i~i~ 414 (425)
T 3vot_A 378 LPYPHFSGYPGFILTSHHSYEECEAFYRELDDELHII 414 (425)
T ss_dssp CCTTCCCCCSEEEEEEESSHHHHHHHHHHHHHHCEEE
T ss_pred CCCCCCCCeEEEEEEEECCHHHHHHHHHHHhCccEEE
Confidence 764 34579999999999999999999999999985
No 16
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=100.00 E-value=2.3e-46 Score=390.65 Aligned_cols=376 Identities=19% Similarity=0.205 Sum_probs=304.1
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
.+.++|+|+|+|.++++++++|+++|++|+++ +.++.++...++|+.+.. ++.|.+.+.++++ ++|+|+
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~--d~~~~~p~~~~ad~~~~~-------~~~d~~~l~~~a~--~~D~V~ 101 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVL--DPDPASPAGAVADRHLRA-------AYDDEAALAELAG--LCEAVS 101 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE--CSCTTCHHHHHSSEEECC-------CTTCHHHHHHHHH--HCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEE--CCCCcCchhhhCCEEEEC-------CcCCHHHHHHHHh--cCCEEE
Confidence 34689999999999999999999999999999 456667888999988854 4889999999995 599999
Q ss_pred eCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHh----cCCcE
Q 009903 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADE----LGFPV 224 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~----~g~P~ 224 (523)
+.++ .....+++.+++. .++||+++++..+.||..+|++|+++|||+|++ ..+.+.+++.+++++ + ||+
T Consensus 102 ~~~e--~~~~~~~~~l~~~--~~vgp~~~a~~~~~dK~~~k~~l~~~Gip~p~~--~~v~~~~e~~~~~~~~~~~~-~P~ 174 (419)
T 4e4t_A 102 TEFE--NVPAASLDFLART--TFVAPAGRCVAVAQDRIAEKRFIEASGVPVAPH--VVIESAAALAALDDAALDAV-LPG 174 (419)
T ss_dssp ECCT--TCCHHHHHHHHTT--SEESSCHHHHHHHTCHHHHHHHHHHTTCCBCCE--EEECSHHHHHTSCHHHHHTT-CSE
T ss_pred EccC--cCCHHHHHHHHcc--CCcCCCHHHHHHhcCHHHHHHHHHHcCcCCCCe--EEECCHHHHHHHHHhhcccc-CCE
Confidence 6543 3446677778777 367999999999999999999999999999999 789999999988888 9 999
Q ss_pred EEEeC-CCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeec
Q 009903 225 MIKAT-AGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRR 303 (523)
Q Consensus 225 VvKP~-~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~ 303 (523)
||||. .|++|+|++++++.+|+.++++.+ ++..+|+|+||+|.+|+++.++++.+|++..+...+. ....
T Consensus 175 VvKp~~~g~~G~Gv~~v~~~~el~~a~~~~--------~~~~~lvEe~i~~~~Eisv~v~~~~~G~~~~~~~~e~-~~~~ 245 (419)
T 4e4t_A 175 ILKTARLGYDGKGQVRVSTAREARDAHAAL--------GGVPCVLEKRLPLKYEVSALIARGADGRSAAFPLAQN-VHHN 245 (419)
T ss_dssp EEEESSSCCTTTTEEEECSHHHHHHHHHHT--------TTCCEEEEECCCEEEEEEEEEEECTTSCEEECCCEEE-EEET
T ss_pred EEEecCCCCCCCceEEECCHHHHHHHHHhc--------CCCcEEEeecCCCCeEEEEEEEEcCCCCEEEEeCeEE-EeeC
Confidence 99999 899999999999999999988754 3578999999996589999999998888887755332 1222
Q ss_pred CceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHH
Q 009903 304 NQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIH 383 (523)
Q Consensus 304 ~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~ 383 (523)
........|++.++++..+++.+++.+++++||+.|++++||+++++|++||+|||||++++..++..++|+|+++++++
T Consensus 246 g~~~~~~~Pa~~l~~~~~~~~~~~a~~i~~~lg~~G~~~vE~~~~~dG~~~v~EiNpR~~~sg~~t~~~~~~s~~~~~~r 325 (419)
T 4e4t_A 246 GILALTIVPAPAADTARVEEAQQAAVRIADTLGYVGVLCVEFFVLEDGSFVANEMAPRPHNSGHYTVDACATSQFEQQVR 325 (419)
T ss_dssp TEEEEEEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTCCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHH
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEeCCCCEEEEEEeCCCCCCCCeEeeccCCCHHHHHHH
Confidence 22233356776689999999999999999999999999999999988999999999999988888888999999999999
Q ss_pred HHcCCCCCCCccccccceeEEEEEEeeCCCCCCC---CCCCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEE
Q 009903 384 VAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNF---RPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIV 460 (523)
Q Consensus 384 ~~~G~~~~~~~~~~~~~~~ai~~~~~a~~~~~~~---~~~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~ 460 (523)
+++|.+++... ....++++.+++......- .+....+..+ ...|++. +++|.....++ .+++|+|++
T Consensus 326 a~~G~pl~~~~----~~~~~~m~n~lg~~~~~~~~~~~~~~~~~~~~--l~~p~~~--~~~ygk~~~~~--~rkmGhv~~ 395 (419)
T 4e4t_A 326 AMTRMPLGNPR----QHSPAAMLNILGDVWFPNGAAAGAVTPPWDTV--AAMPAAH--LHLYGKEEARV--GRKMGHVNF 395 (419)
T ss_dssp HHTTCCCCCCC----BCSCEEEEEEEGGGGCTTCGGGCCCCCCHHHH--HTSTTEE--EEECCCSCCCT--TCEEEEEEE
T ss_pred HHcCCCCCCcc----ccCCeEEEEEecCccccccccccccchHHHHH--HhCCCCE--EEECCCCCCCC--CCceEEEEE
Confidence 99999886543 2344778888875211000 0000111111 2235665 46665444444 467999999
Q ss_pred EcCCHHHHHHHHHHHhhcCeE
Q 009903 461 WAPTREKAIERMKRALNDTII 481 (523)
Q Consensus 461 ~g~s~~ea~~~~~~~~~~i~i 481 (523)
.|+|.++|+++++++.+.|+|
T Consensus 396 ~~~~~~~~~~~a~~~~~~l~~ 416 (419)
T 4e4t_A 396 TAEMRDDAVAAATACAQLLRV 416 (419)
T ss_dssp ECSSHHHHHHHHHHHHHHHTC
T ss_pred EeCCHHHHHHHHHHHHHhcCc
Confidence 999999999999999998876
No 17
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=100.00 E-value=1.5e-45 Score=382.42 Aligned_cols=380 Identities=17% Similarity=0.189 Sum_probs=295.6
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
.++++|||+|+|.+++.++++++++|++++++++++ ..+...++|+.+.++ +.|.+.+++++++.++|+|+
T Consensus 9 ~~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~--~~~~~~~~d~~~~~~-------~~d~~~l~~~~~~~~~d~v~ 79 (391)
T 1kjq_A 9 PAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYA--DAPAMHVAHRSHVIN-------MLDGDALRRVVELEKPHYIV 79 (391)
T ss_dssp TTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESST--TCGGGGGSSEEEECC-------TTCHHHHHHHHHHHCCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCC--CCchhhhccceEECC-------CCCHHHHHHHHHHcCCCEEE
Confidence 346899999999999999999999999999996554 445678889888764 67889999999999999999
Q ss_pred eCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHH-HHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEE
Q 009903 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETM-KNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l-~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvK 227 (523)
++++... ...++.+++.|++ ++|+++++..+.||..++++| +++|||+|++ ..+.+.+++.+++++++||+|||
T Consensus 80 ~~~e~~~--~~~~~~l~~~gi~-~~~~~~~~~~~~dK~~~~~~l~~~~gip~p~~--~~~~~~~~~~~~~~~~g~P~vvK 154 (391)
T 1kjq_A 80 PEIEAIA--TDMLIQLEEEGLN-VVPCARATKLTMNREGIRRLAAEELQLPTSTY--RFADSESLFREAVADIGYPCIVK 154 (391)
T ss_dssp ECSSCSC--HHHHHHHHHTTCE-ESSCHHHHHHHHSHHHHHHHHHTTSCCCBCCE--EEESSHHHHHHHHHHHCSSEEEE
T ss_pred ECCCcCC--HHHHHHHHhCCCC-cCCCHHHHHHhhCHHHHHHHHHHhCCCCCCCe--eeeCCHHHHHHHHHhcCCCEEEE
Confidence 9886543 3456778899994 689999999999999999999 8999999999 78899999999999999999999
Q ss_pred eCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCcee
Q 009903 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKL 307 (523)
Q Consensus 228 P~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~ 307 (523)
|..|+||+||+++++.+|+.++++.+...... .+..+++||||++..|+++.++.+++| +..+...+. ........
T Consensus 155 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~--~~~~~lvEe~i~~g~E~sv~~~~~~~g-~~~~~~~~~-~~~~~~~~ 230 (391)
T 1kjq_A 155 PVMSSSGKGQTFIRSAEQLAQAWKYAQQGGRA--GAGRVIVEGVVKFDFEITLLTVSAVDG-VHFCAPVGH-RQEDGDYR 230 (391)
T ss_dssp ESCC---CCCEEECSGGGHHHHHHHHHHHSGG--GCCCEEEEECCCCSEEEEEEEEEETTE-EEECCCEEE-EEETTEEE
T ss_pred eCCCCCCCCeEEECCHHHHHHHHHHHHhhccc--CCCCEEEEEecCCCeEEEEEEEEeCCC-eEEccCcce-EEECCEEE
Confidence 99999999999999999999999887653211 247899999999339999999998665 333221111 11112222
Q ss_pred eEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcC
Q 009903 308 LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMG 387 (523)
Q Consensus 308 ~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G 387 (523)
..+.|++ ++++..+++.+++.+++++||+.|++++||++++++ +|++|||||++++.......+|+|++++++++++|
T Consensus 231 ~~~~p~~-l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~~~~-~~viEiN~R~~~~~~~~~~~~g~~~~~~~~~~~~G 308 (391)
T 1kjq_A 231 ESWQPQQ-MSPLALERAQEIARKVVLALGGYGLFGVELFVCGDE-VIFSEVSPRPHDTGMVTLISQDLSEFALHVRAFLG 308 (391)
T ss_dssp EEEECCC-CCHHHHHHHHHHHHHHHHHHCSSEEEEEEEEEETTE-EEEEEEESSCCGGGGGHHHHBSSCHHHHHHHHHTT
T ss_pred EEEeCCC-CCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCc-EEEEEEECCCCCCcceeeeecCcCHHHHHHHHHcC
Confidence 3345776 899999999999999999999999999999999875 99999999998775444445699999999999999
Q ss_pred CCCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEE-ecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHH
Q 009903 388 GKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAY-LPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRE 466 (523)
Q Consensus 388 ~~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~-~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~ 466 (523)
.+++. +...+++++++++++++.. .+. +..+ .... |++.+ +++. . ..+.+++++|+|+++|+|++
T Consensus 309 ~~~~~----~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~-pg~~v--~~~~-~-~~~~~~~~lg~v~~~g~~~~ 374 (391)
T 1kjq_A 309 LPVGG----IRQYGPAASAVILPQLTSQ--NVT---FDNVQNAVG-ADLQI--RLFG-K-PEIDGSRRLGVALATAESVV 374 (391)
T ss_dssp CCCCC----CCBCSSEEEEEECCEEEES--SCE---EECGGGSCB-TTEEE--EECC-C-CCEEEECCCEEEEEECSSHH
T ss_pred CCCCC----ccccCcEEEEEEEccCccc--ccc---cccHHHHhC-CCCEE--EEec-c-CCCCCCCeEEEEEEecCCHH
Confidence 98753 2345677888888764321 111 1111 1112 44432 2221 1 11234567999999999999
Q ss_pred HHHHHHHHHhhcCeEe
Q 009903 467 KAIERMKRALNDTIIT 482 (523)
Q Consensus 467 ea~~~~~~~~~~i~i~ 482 (523)
+|.++++++++.+.++
T Consensus 375 ~a~~~~~~~~~~i~~~ 390 (391)
T 1kjq_A 375 DAIERAKHAAGQVKVQ 390 (391)
T ss_dssp HHHHHHHHHHHHCEEE
T ss_pred HHHHHHHHHHhhheec
Confidence 9999999999999986
No 18
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=100.00 E-value=1e-45 Score=384.45 Aligned_cols=370 Identities=19% Similarity=0.253 Sum_probs=298.3
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccC--eeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
+++|+|+|+|.+++.++++|+++|++|++++ +..++..+++| ..+.. ++.|.+.+.+++++ +|.|.
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d---~~~~p~~~~ad~~~~~~~-------~~~d~~~l~~~a~~--~d~i~ 91 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNVLD---ADNSPAKQISAHDGHVTG-------SFKEREAVRQLAKT--CDVVT 91 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEE---STTCTTGGGCCSSCCEES-------CTTCHHHHHHHHTT--CSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE---CCCCcHHHhccccceeec-------CCCCHHHHHHHHHh--CCEEE
Confidence 6799999999999999999999999999996 35566778888 44443 58899999999975 89888
Q ss_pred eCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCC--CHHHHHHHHHhcCCcEEE
Q 009903 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQ--STEEAVKLADELGFPVMI 226 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~--s~~e~~~~~~~~g~P~Vv 226 (523)
+..+. ....+++.+++ |++ ++|+++++..+.||..++++|+++|||+|++ ..+. +.+++.++++++|||+||
T Consensus 92 ~e~e~--~~~~~l~~l~~-g~~-v~p~~~a~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~~~~~~g~P~Vv 165 (403)
T 3k5i_A 92 AEIEH--VDTYALEEVAS-EVK-IEPSWQAIRTIQNKFNQKEHLRKYGIPMAEH--RELVENTPAELAKVGEQLGYPLML 165 (403)
T ss_dssp ESSSC--SCHHHHHHHTT-TSE-ESSCHHHHHHHTSHHHHHHHHHTTTCCBCCE--EEESSCCHHHHHHHHHHHCSSEEE
T ss_pred ECCCC--CCHHHHHHHHc-CCc-cCcCHHHHHHhcCHHHHHHHHHHCCcCCCCE--EEEcCCCHHHHHHHHHHhCCCEEE
Confidence 65433 24567788888 998 7899999999999999999999999999999 6777 999999999999999999
Q ss_pred EeCCCC-CCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCc
Q 009903 227 KATAGG-GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQ 305 (523)
Q Consensus 227 KP~~g~-gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~ 305 (523)
||..|+ +|+|++++++.+|+.++++.+ ++..+|+|+||++.+|+++.++.++.| +..+. ........+.
T Consensus 166 Kp~~gg~~g~Gv~~v~~~~el~~a~~~~--------~~~~~lvEe~i~~~~E~sv~v~~~~~g-~~~~p-~~~~~~~~g~ 235 (403)
T 3k5i_A 166 KSKTMAYDGRGNFRVNSQDDIPEALEAL--------KDRPLYAEKWAYFKMELAVIVVKTKDE-VLSYP-TVETVQEDSI 235 (403)
T ss_dssp EESSSCCTTTTEEEECSTTSHHHHHHHT--------TTSCEEEEECCCEEEEEEEEEEECSSC-EEECC-CEEEEEETTE
T ss_pred EeCCCCcCCCCEEEECCHHHHHHHHHhc--------CCCcEEEecCCCCCeEEEEEEEEcCCC-EEEeC-CeeeEEeCCE
Confidence 999987 999999999999999988754 347899999999559999999998877 44443 2233444455
Q ss_pred eeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHH
Q 009903 306 KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVA 385 (523)
Q Consensus 306 ~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~ 385 (523)
......|++.++++..+++.+++.+++++||+.|++++||+++++|+++|+|||||++++..++..++|+|+++++++++
T Consensus 236 ~~~~~~Pa~~l~~~~~~~~~~~a~~i~~~Lg~~G~~~ve~~~~~dg~~~v~EiNpR~~~sg~~~~~~~~~s~~~~~~ra~ 315 (403)
T 3k5i_A 236 CKLVYAPARNVSDAINQKAQELARKAVAAFDGKGVFGVEMFLLEDDSIMLCEIASRIHNSGHYTIEGCALSQFDAHLRAI 315 (403)
T ss_dssp EEEEEESCSSCCHHHHHHHHHHHHHHHHTSCCSEEEEEEEEEETTSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCCcEEEEEeecCCCCCCceeeeecCCCHHHHHHHHH
Confidence 55566787668999999999999999999999999999999998899999999999998645555668999999999999
Q ss_pred cCCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEE-ecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCC
Q 009903 386 MGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAY-LPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPT 464 (523)
Q Consensus 386 ~G~~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~-~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s 464 (523)
+|.+++... ....+.++++.+++++... ..+..+ .....|++. ++++.....++ .+++|+|+++|+|
T Consensus 316 ~G~pl~~~~--~~~~~~a~m~nilg~~~~~------~~~~~~~~~~~~p~~~--~~~ygk~~~~~--~rkmGhv~~~~~~ 383 (403)
T 3k5i_A 316 LDLPIPAQS--LEIRQPSIMLNIIGGAAPD------THLQAAECALSIPNAS--IHLYSKGAAKP--GRKMGHITVTAPT 383 (403)
T ss_dssp TTCCCCGGG--GSBSSCEEEEEEECCSSSS------HHHHHHHHHTTSTTEE--EEECCCCSCCT--TCEEEEEEEECSS
T ss_pred cCCCCCccc--ccCCCcEEEEEEecCCccc------cchhHHHHHhcCCCCE--EEECCCCCCCC--CCeeEEEEEEcCC
Confidence 999876432 2334568888888753210 001111 122345665 56665544444 4679999999999
Q ss_pred HHHHHHHHHHHhhcCe
Q 009903 465 REKAIERMKRALNDTI 480 (523)
Q Consensus 465 ~~ea~~~~~~~~~~i~ 480 (523)
.++|+++++++++.+.
T Consensus 384 ~~~~~~~a~~~~~~~~ 399 (403)
T 3k5i_A 384 MHEAETHIQPLIDVVD 399 (403)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhh
Confidence 9999999999987653
No 19
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=100.00 E-value=2.9e-45 Score=385.34 Aligned_cols=389 Identities=16% Similarity=0.193 Sum_probs=296.5
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
++++|||+|+|.+++.++++++++|+++++++++++ .+...++|+.+.++ +.|.+.+++++++.++|+|++
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~~--~~~~~~ad~~~~~~-------~~d~~~l~~~~~~~~~d~V~~ 88 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYAN--APAMQVAHRSYVGN-------MMDKDFLWSVVEREKPDAIIP 88 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHTTCEEEEEESSTT--CHHHHHSSEEEESC-------TTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC--ChhhhhcceEEECC-------CCCHHHHHHHHHHcCCCEEEE
Confidence 467999999999999999999999999999965543 45677889888764 778999999999999999999
Q ss_pred CCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHH-HHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEe
Q 009903 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETM-KNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKA 228 (523)
Q Consensus 150 ~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l-~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP 228 (523)
+++... ..+++.++++|+ .+||+++++..+.||..++++| +++|||+|++ ..+.+.+++.+++++++||+||||
T Consensus 89 ~~e~~~--~~~~~~l~~~gi-~~~~~~~~~~~~~dK~~~k~~l~~~~gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp 163 (433)
T 2dwc_A 89 EIEAIN--LDALFEFEKDGY-FVVPNARATWIAMHRERLRETLVKEAKVPTSRY--MYATTLDELYEACEKIGYPCHTKA 163 (433)
T ss_dssp CSSCSC--HHHHHHHHHTTC-CBSSCHHHHHHHHCHHHHHHHHHHTSCCCCCCE--EEESSHHHHHHHHHHHCSSEEEEE
T ss_pred CcccCC--HHHHHHHHhcCC-eeCCCHHHHHHhhCHHHHHHHHHHhcCCCCCCe--eEeCCHHHHHHHHHhcCCCEEEEE
Confidence 887543 456678899999 4689999999999999999999 8999999999 788999999999999999999999
Q ss_pred CCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccC-CCcEEEEEEEEeC--CCcE--EEEeeeceeeeec
Q 009903 229 TAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQ-NPRHIEFQVLADK--YGNV--VHFGERDCSIQRR 303 (523)
Q Consensus 229 ~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~-G~~e~sv~v~~d~--~g~v--~~~~~~~~~~~~~ 303 (523)
..|+||+||+++++.+|+.++++.+...... .+..+++||||+ | .|+++.++.+. +|++ ..+...+. ....
T Consensus 164 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~--~~~~~lvEe~i~~g-~E~sv~~~~~~~~~G~~~~~~~~~~~~-~~~~ 239 (433)
T 2dwc_A 164 IMSSSGKGSYFVKGPEDIPKAWEEAKTKARG--SAEKIIVEEHIDFD-VEVTELAVRHFDENGEIVTTFPKPVGH-YQID 239 (433)
T ss_dssp CCC------EEECSGGGHHHHHHC-----------CCEEEEECCCCS-EEEEECCEEEECTTSCEEEEEECCEEE-EESS
T ss_pred CCCcCCCCeEEECCHHHHHHHHHHHHhhccc--CCCCEEEEccCCCC-eeEEEEEEecccCCCCEeEEEecccce-EEEc
Confidence 9999999999999999999999876543210 246899999999 6 99999999875 6664 33222111 1112
Q ss_pred CceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCc--cceeeecCCCHHHHH
Q 009903 304 NQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEH--PVTEMISSVDLIEEQ 381 (523)
Q Consensus 304 ~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~--~~~~~~~Gidl~~~~ 381 (523)
+.....+.|++ ++++..+++.+++.+++++||+.|++++||++++++ +||+|||||++++. .+...++|+|+++++
T Consensus 240 ~~~~~~~~p~~-l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~~~-~~viEiN~R~~~~~~~~~~~~~~g~~~~~~~ 317 (433)
T 2dwc_A 240 GDYHASWQPAE-ISEKAEREVYRIAKRITDVLGGLGIFGVEMFVKGDK-VWANEVSPRPHDTGMVTLASHPPGFSEFALH 317 (433)
T ss_dssp SSEEEEEESCC-CCHHHHHHHHHHHHHHHHHHCSSEECEEEEEEETTE-EEEEEEESSCCGGGGGHHHHSCTTCSHHHHH
T ss_pred CEEEEEEcCCC-CCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCc-EEEEEEeCCcCCCcceehhHhccCCCHHHHH
Confidence 22333455776 899999999999999999999999999999999875 99999999998873 344556799999999
Q ss_pred HHHHcCCCCCCC----ccccccceeEEEEEEeeCCCCCCCCCCCceEEEE-ecCCCCcEEEeeeecCCcccCCCCCcceE
Q 009903 382 IHVAMGGKLRYK----QEDIVLQGHSIECRINAEDPFKNFRPGPGRITAY-LPAGGPFVRMDSHVYPDYVVPPSYDSLLG 456 (523)
Q Consensus 382 ~~~~~G~~~~~~----~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~-~~~~~~~v~~~~~~~~G~~v~~~~~~~iG 456 (523)
+++++|.+++.. ..++...+++++++++++++. ..+. +..+ .....|++.+ +++.+ .. ...++++|
T Consensus 318 ~~~~~G~~l~~~~~~~~~~~~~~~~a~~~~v~~~~~~--~~~~---i~g~~~~~~~pg~~v--~~~~~-~~-~~~~~~lg 388 (433)
T 2dwc_A 318 LRAVLGLPIPGEWVDGYRLFPMLIPAATHVIKAKVSG--YSPR---FRGLVKALSVPNATV--RLFGK-PE-AYVGRRLG 388 (433)
T ss_dssp HHHHHTCCCCCEEETTEEEECCSSCEEEEEEECSSCE--ESCE---EECHHHHTTSTTEEE--EECCC-SE-ECTTCEEE
T ss_pred HHHHcCCCCCcccccccccccccccEEEEEEEcCCCC--cCcC---cchHHHHhhCCCcEE--EEecC-CC-CCCCCeEE
Confidence 999999987531 012345667888888886431 1111 1111 1123345432 22221 11 23456799
Q ss_pred EEEEEcCCHHHHHHHHHHHhhcCeEeecccC
Q 009903 457 KLIVWAPTREKAIERMKRALNDTIITGVPTT 487 (523)
Q Consensus 457 ~vi~~g~s~~ea~~~~~~~~~~i~i~~~~~~ 487 (523)
+|+++|+|+++|.++++++++.+.+++...+
T Consensus 389 ~v~~~g~~~~ea~~~~~~~~~~i~~~~~~~~ 419 (433)
T 2dwc_A 389 IALAWDKDVEVAKRKAEMVAHMIELRTRSSD 419 (433)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEECTTSC
T ss_pred EEEEEeCCHHHHHHHHHHHHhheEEEeeccC
Confidence 9999999999999999999999999987654
No 20
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=2e-44 Score=371.06 Aligned_cols=359 Identities=19% Similarity=0.261 Sum_probs=288.6
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCCC
Q 009903 73 KILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGYG 152 (523)
Q Consensus 73 ~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~~g 152 (523)
||||+|+|.+|+.++++++++|+++++++++. ..+...++|. +.. ++.|.+.+++++ .++|+|+++++
T Consensus 1 ~iliiG~g~~g~~~~~a~~~~G~~v~~~~~~~--~~~~~~~a~~-~~~-------~~~d~~~l~~~~--~~~d~v~~~~e 68 (369)
T 3aw8_A 1 MIGILGGGQLGRMLALAGYPLGLSFRFLDPSP--EACAGQVGEL-VVG-------EFLDEGALLRFA--EGLALVTYEFE 68 (369)
T ss_dssp CEEEECCSHHHHHHHHHHTTBTCCEEEEESCT--TCGGGGTSEE-EEC-------CTTCHHHHHHHH--TTCSEEEECCT
T ss_pred CEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC--CChHHHhhce-Eec-------CCCCHHHHHHHH--hCCCEEEECCC
Confidence 59999999999999999999999999996543 3445667777 543 478899999998 67999999876
Q ss_pred cccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeCCCC
Q 009903 153 FLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGG 232 (523)
Q Consensus 153 ~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~~g~ 232 (523)
.. ...+++.++++| ++||+.+++..+.||..++++|+++|||+|++ ..+.+.+++.++++++|||+|+||..++
T Consensus 69 ~~--~~~~~~~l~~~g--~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp~~~~ 142 (369)
T 3aw8_A 69 NV--PVEAARRLEGRL--PLYPPAKALEVAQDRLREKTFFQGLGVPTPPF--HPVDGPEDLEEGLKRVGLPALLKTRRGG 142 (369)
T ss_dssp TC--CHHHHHHHHHHS--CBSSCHHHHHHHTCHHHHHHHHHHHTCCCCCE--EEESSHHHHHHHHTTTCSSEEEEECCC-
T ss_pred Cc--CHHHHHHHHHcC--CcCCCHHHHHHhcCHHHHHHHHHHCCCCCCCc--eeeCCHHHHHHHHHHcCCCEEEEEcCCC
Confidence 53 356777888899 57999999999999999999999999999999 7889999999999999999999999999
Q ss_pred -CCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccC-CCcEEEEEEEEeCCCcEEEEeeeceeeeecCceeeEe
Q 009903 233 -GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQ-NPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEE 310 (523)
Q Consensus 233 -gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~-G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~~~~ 310 (523)
+|+||+++++.+|+.++++.+ +...+++||||+ | +|+++.++.+++|+++.+...+. ....+......
T Consensus 143 ~~g~Gv~~v~~~~el~~~~~~~--------~~~~~lvEe~i~~g-~e~sv~~~~d~~G~~~~~~~~~~-~~~~~~~~~~~ 212 (369)
T 3aw8_A 143 YDGKGQALVRTEEEALEALKAL--------GGRGLILEGFVPFD-REVSLLAVRGRTGEVAFYPLVEN-RHWGGILRLSL 212 (369)
T ss_dssp -----EEEECSHHHHHHHHTTT--------CSSSEEEEECCCCS-EEEEEEEEECTTSCEEECCCEEE-EEETTEEEEEE
T ss_pred CCcceEEEECCHHHHHHHHHhc--------CCCcEEEEEcCCCC-EEEEEEEEECCCCCEEEECCeee-eeeCCEEEEEE
Confidence 999999999999999888764 247899999999 7 99999999987888776644332 22333333456
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcCCCC
Q 009903 311 APSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKL 390 (523)
Q Consensus 311 ~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G~~~ 390 (523)
.|++.++++..+++.+++.+++++||+.|++++||++++ |+++++|||||++++...+..++|.|+++.++++++|.++
T Consensus 213 ~p~~~l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~~-~~~~viEiN~R~~~~~~~~~~~~g~~~~~~~~~~~~g~~l 291 (369)
T 3aw8_A 213 APAPGASEALQKKAEAYALRAMEALDYVGVLALEFFQVG-EELLFNEMAPRVHNSGHWTIEGAETSQFENHLRAVLGLPL 291 (369)
T ss_dssp ESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEET-TEEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHHTCCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEEC-CcEEEEEEeCCcCCccceeeeeecCCHHHHHHHHHcCCCC
Confidence 677668999999999999999999999999999999998 6699999999998876666668999999999999999988
Q ss_pred CCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHHHHHH
Q 009903 391 RYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIE 470 (523)
Q Consensus 391 ~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~ea~~ 470 (523)
+... ..+.+++++++++++ + +..+ ...|++ +.+++.+ .+++ .+++|+|+++|+|+++|.+
T Consensus 292 ~~~~----~~~~~~~~~~~~~~~--------~-~~~~--~~~p~~--~~~~~g~-~~~~--~~~lg~v~~~g~~~~ea~~ 351 (369)
T 3aw8_A 292 GSTA----PRGQSAMVNLIGEKP--------P-FAEV--LKVEGA--HLHWYGK-AVRP--GRKVGHITLRRDGLKALEE 351 (369)
T ss_dssp CCCC----BCSEEEEEEEESCCC--------C-HHHH--HTSTTE--EEEECCC-CCCT--TCEEEEEEEEESSHHHHHH
T ss_pred CCcc----ccccEEEEEEeCCCc--------h-HHHh--ccCCCc--EEEEecC-CCCC--CCeEEEEEEEcCCHHHHHH
Confidence 6532 234578888887641 1 1111 112444 2344433 3333 3679999999999999999
Q ss_pred HHHHHhhcCe
Q 009903 471 RMKRALNDTI 480 (523)
Q Consensus 471 ~~~~~~~~i~ 480 (523)
+++++++.|.
T Consensus 352 ~~~~~~~~i~ 361 (369)
T 3aw8_A 352 GLARLSRLVS 361 (369)
T ss_dssp HHHHHHTTSS
T ss_pred HHHHHHHHhh
Confidence 9999999987
No 21
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=100.00 E-value=6.2e-45 Score=419.25 Aligned_cols=398 Identities=20% Similarity=0.282 Sum_probs=321.6
Q ss_pred CCccEEEEEcCcHH-----------HHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHH
Q 009903 69 CRQEKILVANRGEI-----------AVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLS 137 (523)
Q Consensus 69 ~~~k~ILi~g~g~~-----------~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~ 137 (523)
.++++|||+|+|.+ |.+++++|+++|++|++++++++.......++|+.+ +. ..+.+.+.+
T Consensus 5 ~~~~kIlIig~G~i~ig~a~E~d~sg~~~~~al~~~G~~vv~v~~~~~~~~~~~~~ad~~~-i~-------p~~~e~i~~ 76 (1073)
T 1a9x_A 5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATY-IE-------PIHWEVVRK 76 (1073)
T ss_dssp SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEE-CS-------CCCHHHHHH
T ss_pred CCCCEEEEECCCcccccccccccchHHHHHHHHHHcCCEEEEEeCCcccccCChhhCcEEE-EC-------CCCHHHHHH
Confidence 45789999999974 788999999999999999877776667788999877 43 357899999
Q ss_pred HHHHcCCCEEEeCCCcc-ccc--HHHHH--HHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHH
Q 009903 138 AAISRGCTMLHPGYGFL-AEN--AVFVE--MCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEE 212 (523)
Q Consensus 138 ~~~~~~id~Vi~~~g~~-~e~--~~~a~--~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e 212 (523)
++++.++|+|+|+++.. ..+ ..+++ .++++|++++|++++++..+.||..++++|+++|+|+|++ ..+.+.++
T Consensus 77 i~~~~~~D~V~p~~g~~~~l~~~~~l~~~~~le~~gv~~~G~~~~ai~~~~DK~~~k~~l~~~Gipvp~~--~~v~~~~e 154 (1073)
T 1a9x_A 77 IIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARS--GIAHTMEE 154 (1073)
T ss_dssp HHHHHCCSEEECSSSHHHHHHHHHHHHHTTHHHHHTCEECSSCHHHHHHHHSHHHHHHHHHHTTCCCCSE--EEESSHHH
T ss_pred HHHHhCCCEEEeccCCchHHHHHHHHHHhhHHHHcCCeeeCCCHHHHHHhhCHHHHHHHHHHCCcCCCCE--EEECCHHH
Confidence 99999999999987631 111 12333 6789999999999999999999999999999999999999 78999999
Q ss_pred HHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEE
Q 009903 213 AVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVH 292 (523)
Q Consensus 213 ~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~ 292 (523)
+.++++++|||+||||..+.||+|+.++++.+|+.++++.+...+ ..+++||||||+|++|+++++++|..|+++.
T Consensus 155 a~~~~~~ig~PvVvKp~~~~Gg~Gv~iv~~~eel~~~~~~~~~~~----~~~~vlvEe~I~G~~E~~v~v~~d~~g~~v~ 230 (1073)
T 1a9x_A 155 ALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLS----PTKELLIDESLIGWKEYEMEVVRDKNDNCII 230 (1073)
T ss_dssp HHHHHHHHCSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHHC----TTSCEEEEECCTTSEEEEEEEEECTTCCEEE
T ss_pred HHHHHHHcCCCEEEEECCCCCCCceEEeCCHHHHHHHHHHHHhhC----CCCcEEEEEccCCCeEEEEEEEEeCCCCEEE
Confidence 999999999999999999999999999999999999998776542 3468999999999889999999998888887
Q ss_pred Eeeecee--eeecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCc-cccEEEEEEeC-CCCEEEEEEecCCCCCccc
Q 009903 293 FGERDCS--IQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYI-GVGTVEFLLDE-RGSFYFMEMNTRIQVEHPV 368 (523)
Q Consensus 293 ~~~~~~~--~~~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~-G~~~vE~~~~~-~G~~~liEiNpR~~g~~~~ 368 (523)
+...+.. ...+........|++.++++..+++.+.+.++++++|+. |.+++||++++ +|+++|||||||+++++.+
T Consensus 231 ~~~~e~~dp~~v~~g~s~~~~Pa~~l~~~~~~~l~~~a~~i~~~lg~~~G~~~vdf~~~~~~g~~~viEiNpR~~~ss~l 310 (1073)
T 1a9x_A 231 VCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSAL 310 (1073)
T ss_dssp EEEEEESSCTTSCGGGSCEEESCCSCCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEECTTTCCEEEEEEESSCCHHHHH
T ss_pred EEEEecccCCccccCcEEEEecCCCCCHHHHHHHHHHHHHHHHHcCcccCceEEEEEEECCCCCEEEEEecCCCCccHHH
Confidence 7443211 001123345566876799999999999999999999999 99999999996 6889999999999988888
Q ss_pred eeeecCCCHHHHHHHHHcCCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecC--Ccc
Q 009903 369 TEMISSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYP--DYV 446 (523)
Q Consensus 369 ~~~~~Gidl~~~~~~~~~G~~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~--G~~ 446 (523)
+++++|+|+.+.++++++|.+++.....+...+ ++ ..|.|..+.+.. ..|.++ ++.+. +.+
T Consensus 311 ~~~atG~~l~~~~~~~a~G~~l~~~~~~i~~~~----------~~-a~f~p~~~~v~~-~ip~~~-----~~~~~~~~~~ 373 (1073)
T 1a9x_A 311 ASKATGFPIAKVAAKLAVGYTLDELMNDITGGR----------TP-ASFEPSIDYVVT-KIPRFN-----FEKFAGANDR 373 (1073)
T ss_dssp HHHHHSCCHHHHHHHHHTTCCGGGSBCTTTTTC----------SB-SCSCCBCSSEEE-EEEECC-----GGGCTTSCCB
T ss_pred HHHHhCCCHHHHHHHHHcCCChHHhhccccCcc----------CH-HHcccCCCcEEE-Eccccc-----ccccCCCCcc
Confidence 889999999999999999998765432221110 12 246676666532 222222 23333 456
Q ss_pred cCCCCCcceEEEEEEcCCHHHHHHHHHHHhhcCeEeecccC--------HHHHHHhcCCcc
Q 009903 447 VPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPTT--------IEYHKLILDVED 499 (523)
Q Consensus 447 v~~~~~~~iG~vi~~g~s~~ea~~~~~~~~~~i~i~~~~~~--------~~~~~~~~~~~~ 499 (523)
+.+.+++ +|+|+++|+|++||++++.++++ +.+.|+.++ .+++...|.+|.
T Consensus 374 ~~~~~~~-~G~v~~~g~~~~ea~~ka~~~l~-~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 432 (1073)
T 1a9x_A 374 LTTQMKS-VGEVMAIGRTQQESLQKALRGLE-VGATGFDPKVSLDDPEALTKIRRELKDAG 432 (1073)
T ss_dssp CCSSCCC-CEEEEEEESSHHHHHHHHHHHSS-SSCSSSCCSSCTTCTTHHHHHHHHHHTCB
T ss_pred cCCCccC-cEEEEEEcCCHHHHHHHHHHhhc-ccccCcCccccccccccHHHHHHHHhCCC
Confidence 6666677 89999999999999999999998 789998854 567777777765
No 22
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=100.00 E-value=3.6e-45 Score=375.80 Aligned_cols=355 Identities=16% Similarity=0.153 Sum_probs=262.0
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
||+|+|+|+|..|..++++|+++|++|+++++ ++.++...++|+++.++ .+.+.+.++.++ .++|+|++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~--~~~~~~~~~aD~~~~~~------~~~d~~~~~~~~--~~~D~v~~~ 70 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDK--NPQALIRNYADEFYCFD------VIKEPEKLLELS--KRVDAVLPV 70 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES--CTTCTTTTTSSEEEECC------TTTCHHHHHHHH--TSSSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC--CCCChhHhhCCEEEECC------CCcCHHHHHHHh--cCCCEEEEC
Confidence 68999999999999999999999999999954 55567788999999875 345667776665 469999999
Q ss_pred CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeCC
Q 009903 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (523)
Q Consensus 151 ~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~~ 230 (523)
++...+...+++++++.|++ +||++++++.+.||..+|++|+++|+|+|++ . .+|||+||||..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~-~g~~~~a~~~~~dK~~~k~~l~~~gip~~~~--~-------------~ig~P~vvKp~~ 134 (363)
T 4ffl_A 71 NENLACIEFLNSIKEKFSCP-VLFDFEAYRISRDKKKSKDYFKSIGVPTPQD--R-------------PSKPPYFVKPPC 134 (363)
T ss_dssp CCCHHHHHHHHHHGGGCSSC-BCCCHHHHHHHTSHHHHHHHHHHTTCCCCCB--S-------------CSSSCEEEECSS
T ss_pred CCChhHHHHHHHHHHHCCCc-cCCCHHHHHHhhCHHHHHHHHHhcCCCCCCc--e-------------ecCCCEEEEECC
Confidence 87654445556677777876 5899999999999999999999999999987 2 368999999999
Q ss_pred CCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCceeeEe
Q 009903 231 GGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEE 310 (523)
Q Consensus 231 g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~~~~ 310 (523)
|+||+|++++++.+++.. ....+++||||+| +|++++++.|+.+.++.....++..... .....
T Consensus 135 g~g~~gv~~v~~~~~~~~-------------~~~~~~~ee~i~g-~e~sv~~~~d~~~~~~~~~~~~~~~~~~--~~~~~ 198 (363)
T 4ffl_A 135 ESSSVGARIIYDDKDLEG-------------LEPDTLVEEYVEG-EVVSLEVVGDGSHFAVVKETLVHIDETY--DCHMV 198 (363)
T ss_dssp CCTTTTCEEEC------C-------------CCTTCEEEECCCS-EEEEEEEEEESSCEEECCCEEEEECTTS--CEEEE
T ss_pred CCCCcCeEEeccHHHhhh-------------hccchhhhhhccC-cEEEEEEEEECCeEEEEEEEEeccCCcc--cceee
Confidence 999999999999988753 2478999999999 9999999999765554443333332222 22333
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCc-cceeeecCCCHHHHHHHHHcCCC
Q 009903 311 APSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEH-PVTEMISSVDLIEEQIHVAMGGK 389 (523)
Q Consensus 311 ~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~-~~~~~~~Gidl~~~~~~~~~G~~ 389 (523)
.|.+ .. +++.+++.++++++|+.|++++||+++++| +||+|||||++|.. .+++.++|+|++++++++++|.+
T Consensus 199 ~p~~-~~----~~~~~~a~~~~~~l~~~G~~~vef~~~~~~-~~viEiN~R~~g~~~~~~~~~~g~dl~~~~~~~~~g~~ 272 (363)
T 4ffl_A 199 TPLP-AN----PLFRQISHDLAANLPLKGIMDVEAIFGPKG-LRVIEIDARFPSQTPTVVYYSSGINLIELLFRAFTDGV 272 (363)
T ss_dssp EECC-CC----HHHHHHHHHHHHTTTCEEEEEEEEEEETTE-EEEEEEECSCCSSHHHHHHHHHCCCHHHHHHHHTTTCC
T ss_pred cchh-HH----HHHHHHHHHHHHhCCccceeeeeeEEeCCe-EEEEEEeCCCCCChHHHHHHHHCcCHHHHHHHHHCCCC
Confidence 4544 33 457789999999999999999999999877 99999999998764 47888999999999999999998
Q ss_pred CCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCC-cccCCCCCcceEEEEEEcCCHHHH
Q 009903 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPD-YVVPPSYDSLLGKLIVWAPTREKA 468 (523)
Q Consensus 390 ~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G-~~v~~~~~~~iG~vi~~g~s~~ea 468 (523)
++... ....++++...+.+.... .+.+..+.+ ....+.+.. .+...+ +...+.+++++|+|+++|+|++||
T Consensus 273 ~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~vi~~G~~~~eA 344 (363)
T 4ffl_A 273 EEIRA--IPENKYCIYEHLMFGENG-VLIPVGEQV----LSMGSDYGK-FYEEPGIEIFLCKGEYPVFTMVFWGKDREET 344 (363)
T ss_dssp CCC------CCCEEEEEEEEECGGG-BEEECCHHH----HTTCSEEEE-EEEETTEEEEEEESSSCEEEEEEEESSHHHH
T ss_pred CCccc--cCCCceEEEEEEecCCCC-ccCCCCceE----EecCCCeeE-EEecCCCCCEecCCCCceEEEEEEECCHHHH
Confidence 76543 344455666666554221 111211111 111122221 111111 111123466799999999999999
Q ss_pred HHHHHHHhhcCeE
Q 009903 469 IERMKRALNDTII 481 (523)
Q Consensus 469 ~~~~~~~~~~i~i 481 (523)
++|++++++.|+.
T Consensus 345 ~~k~~~al~~i~~ 357 (363)
T 4ffl_A 345 GAKRCKGLSVLKE 357 (363)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998875
No 23
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=100.00 E-value=3.3e-44 Score=371.00 Aligned_cols=369 Identities=19% Similarity=0.265 Sum_probs=285.1
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
||+|||+|+|.+++.++++|+++|+++++++++.+ .+...+++..+.++ +.|.+.+.+++ .++|+|++.
T Consensus 1 M~~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~~--~~~~~~~~~~~~~~-------~~d~~~l~~~~--~~~d~v~~~ 69 (380)
T 3ax6_A 1 MKKIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTPR--SPAGQVADEQIVAG-------FFDSERIEDLV--KGSDVTTYD 69 (380)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT--CTTGGGSSEEEECC-------TTCHHHHHHHH--HTCSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC--CchhhhCceEEECC-------CCCHHHHHHHH--hcCCEEEec
Confidence 47899999999999999999999999999965443 34566888877653 67888999988 569999987
Q ss_pred CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeCC
Q 009903 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (523)
Q Consensus 151 ~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~~ 230 (523)
.+.. ....++.++++|++ ++|+++++..+.||..++++|+++|+|+|++ ..+.+.++ ++++++||+||||..
T Consensus 70 ~e~~--~~~~~~~l~~~gi~-~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~~~~~~~---~~~~~~~P~vvKp~~ 141 (380)
T 3ax6_A 70 LEHI--DVQTLKKLYNEGYK-IHPSPYTLEIIQDKFVQKEFLKKNGIPVPEY--KLVKDLES---DVREFGFPVVQKARK 141 (380)
T ss_dssp CSCS--CHHHHHHHHHTTCE-ESSCHHHHHHHHSHHHHHHHHHHTTCCCCCE--EECSSHHH---HHHTTCSSEEEEESC
T ss_pred ccCC--CHHHHHHHHHCCCe-ECCCHHHHHHhcCHHHHHHHHHHcCCCCCCe--EEeCCHHH---HHHhcCCCEEEEecC
Confidence 7542 25667788999998 5799999999999999999999999999999 77888877 677899999999999
Q ss_pred CC-CCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccC-CCcEEEEEEEEeCCCcEEEEeeeceee-eecCcee
Q 009903 231 GG-GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQ-NPRHIEFQVLADKYGNVVHFGERDCSI-QRRNQKL 307 (523)
Q Consensus 231 g~-gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~-G~~e~sv~v~~d~~g~v~~~~~~~~~~-~~~~~~~ 307 (523)
|+ +|+||+++++.+|+.++++ ..+++||||+ | .|+++.++.+++|++..+...+... ...+...
T Consensus 142 ~~y~g~Gv~~v~~~~el~~~~~------------~~~lvEe~i~~g-~e~sv~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 208 (380)
T 3ax6_A 142 GGYDGRGVFIIKNEKDLENAIK------------GETYLEEFVEIE-KELAVMVARNEKGEIACYPVVEMYFDEDANICD 208 (380)
T ss_dssp CC-----EEEECSGGGGGGCCC------------SSEEEEECCCEE-EEEEEEEEECSSCCEEEEEEEEEC--------C
T ss_pred CCCCCCCeEEECCHHHHHHHhc------------CCEEEEeccCCC-eeEEEEEEECCCCCEEEECCeeeeecccCCeeE
Confidence 99 9999999999999876543 6799999999 7 9999999998788877664433210 1222223
Q ss_pred eEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcC
Q 009903 308 LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMG 387 (523)
Q Consensus 308 ~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G 387 (523)
....|.+ ++++..+++.+++.+++++||+.|++++||+++++|+++++|||||++++...+..++|+|++++++++++|
T Consensus 209 ~~~~p~~-l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~~~g~~~viEiN~R~~~~~~~~~~~~~~~~~~~~~~~~~g 287 (380)
T 3ax6_A 209 TVIAPAR-IEEKYSKIAREIATSVVEALEGVGIFGIEMFLTKQGEILVNEIAPRPHNSGHYTIEACVTSQFEQHIRAIMN 287 (380)
T ss_dssp EEEESCS-SCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTSCEEEEEEESSCCGGGTHHHHHBSSCHHHHHHHHHTT
T ss_pred EEECCCC-CCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCcEEEEEecCCCCCCceeehhhccccHHHHHHHHHhC
Confidence 3456776 899999999999999999999999999999999989999999999998876666778999999999999999
Q ss_pred CCCCCCccccccceeEEEEEEeeCCCCCCCCC-CCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHH
Q 009903 388 GKLRYKQEDIVLQGHSIECRINAEDPFKNFRP-GPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRE 466 (523)
Q Consensus 388 ~~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~-~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~ 466 (523)
.+++.... . ..++++.+++.....+... ..| +..+ ..|++. ++++ |..+.. ..+++|+|++.|+|.+
T Consensus 288 ~~l~~~~~--~--~~~~~~~~l~~~~~~~~~~~~~~-~~~~---~~p~~~--~~~~-g~~~~~-~~~~lg~v~~~g~~~~ 355 (380)
T 3ax6_A 288 LPLGSTEL--L--IPAVMVNLLGEEGYYGKPALIGL-EEAL---AIEGLS--LHFY-GKKETR-PYRKMGHFTVVDRDVE 355 (380)
T ss_dssp CCCCCCCB--C--SCEEEEEEEBCTTCCBSEEEESH-HHHH---TSTTEE--EEEC-CCSCBC-BTCEEEEEEEECSSHH
T ss_pred CCCCCccc--c--CceEEEEEecccccccccccchh-HHHh---cCCCCE--EEec-CCCCCC-CCCeeEEEEEEeCCHH
Confidence 98865432 1 2366777777532101100 111 1111 235554 3333 333322 2457999999999999
Q ss_pred HHHHHHHHHhhcCeEeec
Q 009903 467 KAIERMKRALNDTIITGV 484 (523)
Q Consensus 467 ea~~~~~~~~~~i~i~~~ 484 (523)
+|.++++++++.|+++.-
T Consensus 356 ~a~~~~~~~~~~i~~~~~ 373 (380)
T 3ax6_A 356 RALEKALRAKKILKVVSE 373 (380)
T ss_dssp HHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHHhhhhhhcC
Confidence 999999999999998653
No 24
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=100.00 E-value=9.8e-44 Score=368.45 Aligned_cols=365 Identities=18% Similarity=0.212 Sum_probs=293.3
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
+.|+|+|+|+|.+++.++++|+++|++|+++++ ++..+...++|..+.. ++.|.+.+.+++++ +|+|.+
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~--~~~~~~~~~ad~~~~~-------~~~d~~~l~~~~~~--~dvI~~ 81 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDP--TKNSPCAQVADIEIVA-------SYDDLKAIQHLAEI--SDVVTY 81 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEES--STTCTTTTTCSEEEEC-------CTTCHHHHHHHHHT--CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeC--CCCCchHHhCCceEec-------CcCCHHHHHHHHHh--CCEeee
Confidence 357999999999999999999999999999954 4456678889988865 48899999999875 788875
Q ss_pred CCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeC
Q 009903 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (523)
Q Consensus 150 ~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~ 229 (523)
..+ ......++.+++.|+ ++|+++++..+.||..++++|+++|||+|++ ..+.+.+++.++++++|||+||||.
T Consensus 82 ~~e--~~~~~~~~~l~~~g~--~~~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp~ 155 (389)
T 3q2o_A 82 EFE--NIDYRCLQWLEKHAY--LPQGSQLLSKTQNRFTEKNAIEKAGLPVATY--RLVQNQEQLTEAIAELSYPSVLKTT 155 (389)
T ss_dssp SCC--CCCHHHHHHHHHHSC--CTTCSHHHHHTTSHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHCSSEEEEES
T ss_pred ccc--cccHHHHHHHHhhCc--cCCCHHHHHHhcCHHHHHHHHHHCCCCCCCe--EEECCHHHHHHHHHhcCCCEEEEeC
Confidence 543 244577788888886 6899999999999999999999999999999 7899999999999999999999999
Q ss_pred CCCC-CCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCceee
Q 009903 230 AGGG-GRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLL 308 (523)
Q Consensus 230 ~g~g-s~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~~ 308 (523)
.+++ |+|++++++.+|+.++++.+. +..+|+|+||+|.+|+++.++.+.+|++..+...+. .........
T Consensus 156 ~~~~~g~Gv~~v~~~~el~~~~~~~~--------~~~~lvEe~i~g~~E~~v~~~~~~~G~~~~~~~~e~-~~~~g~~~~ 226 (389)
T 3q2o_A 156 TGGYDGKGQVVLRSEADVDEARKLAN--------AAECILEKWVPFEKEVSVIVIRSVSGETKVFPVAEN-IHVNNILHE 226 (389)
T ss_dssp SCCSSSCCEEEESSGGGHHHHHHHHH--------HSCEEEEECCCCSEEEEEEEEECTTCCEEECCCEEE-EEETTEEEE
T ss_pred CCCCCCCCeEEECCHHHHHHHHHhcC--------CCCEEEEecccCceEEEEEEEEcCCCCEEEecCeee-EEcCCceEE
Confidence 9975 799999999999999987653 278999999998899999999988888877755442 222333334
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcCC
Q 009903 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (523)
Q Consensus 309 ~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G~ 388 (523)
...|+. ++++..+++.+++.+++++||+.|++++||+++++|++||+|||||++++.+++..++|+|++++++++++|.
T Consensus 227 ~~~p~~-l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~~dg~~~viEiNpR~~~s~~~~~~~~g~~~~~~~~r~~lg~ 305 (389)
T 3q2o_A 227 SIVPAR-ITEELSQKAIAYAKVLADELELVGTLAVEMFATADGEIYINELAPRPHNSGHYTQDACETSQFGQHIRAICNL 305 (389)
T ss_dssp EEESCS-SCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHHTC
T ss_pred EECCCC-CCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCCCEEEEEeeCCCCCchhHHHHHcCCCHHHHHHHHHcCC
Confidence 455765 9999999999999999999999999999999998889999999999998877778889999999999999999
Q ss_pred CCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHHHH
Q 009903 389 KLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKA 468 (523)
Q Consensus 389 ~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~ea 468 (523)
+++... ....+++..+++... ...... ....|++. .++|.....++ .+.+|+|++.|+|.++|
T Consensus 306 ~l~~~~----~~~~~~~~~~~g~~~-------~~~~~~--~~~~p~~~--~~lygk~~~~~--~r~~G~v~~~~~~~~~a 368 (389)
T 3q2o_A 306 PLGETN----LLKPVVMVNILGEHI-------EGVLRQ--VNRLTGCY--LHLYGKEEAKA--QRKMGHVNILNDNIEVA 368 (389)
T ss_dssp CCCCCC----BCSCEEEEEEEHHHH-------HHHHHT--GGGCTTEE--EEECCCSSCCT--TSEEEEEEEECSSHHHH
T ss_pred CCCCcc----ccCcEEEEEEecCch-------hhHHHH--HHhCCCCE--EEECCCCCCCC--CCeeEEEEEEcCCHHHH
Confidence 886532 233366666654210 000000 11234544 45554333333 34599999999999999
Q ss_pred HHHHHHHhhc
Q 009903 469 IERMKRALND 478 (523)
Q Consensus 469 ~~~~~~~~~~ 478 (523)
+++++.+.-+
T Consensus 369 ~~~a~~~~~w 378 (389)
T 3q2o_A 369 LEKAKSLHIW 378 (389)
T ss_dssp HHHHHHTTSC
T ss_pred HHHHHHhCcc
Confidence 9999876543
No 25
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=100.00 E-value=2.3e-43 Score=363.87 Aligned_cols=360 Identities=18% Similarity=0.239 Sum_probs=286.7
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
++++|+|+|+|..|+.++++|+++|++|+++++ ++.++...++|+.+.. ++.|.+.+.+++++ +|+|.+
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~--~~~~p~~~~ad~~~~~-------~~~d~~~l~~~~~~--~dvi~~ 79 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDP--SEDCPCRYVAHEFIQA-------KYDDEKALNQLGQK--CDVITY 79 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEES--CTTCTTGGGSSEEEEC-------CTTCHHHHHHHHHH--CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC--CCCChhhhhCCEEEEC-------CCCCHHHHHHHHHh--CCccee
Confidence 468999999999999999999999999999954 4456778899998875 38899999999976 898876
Q ss_pred CCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeC
Q 009903 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (523)
Q Consensus 150 ~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~ 229 (523)
.++. .....++.+++.+ .++|+++++..+.||..++++|+++|||+|++ ..+.+.+++.++++++|||+|+||.
T Consensus 80 ~~E~--~~~~~l~~l~~~~--~v~p~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp~ 153 (377)
T 3orq_A 80 EFEN--ISAQQLKLLCEKY--NIPQGYQAIQLLQDRLTEKETLKSAGTKVVPF--ISVKESTDIDKAIETLGYPFIVKTR 153 (377)
T ss_dssp SSTT--SCHHHHHHHHHHS--CCTTTTHHHHHHHSHHHHHHHHHHTTCCBCCE--EEECSSTHHHHHHHHTCSSEEEEES
T ss_pred cccc--cCHHHHHHHhhhc--CCCCCHHHHHHhcCHHHHHHHHHHCCCCCCCe--EEECCHHHHHHHHHHcCCCEEEEeC
Confidence 5432 2234445555553 25699999999999999999999999999999 7889999999999999999999999
Q ss_pred CCC-CCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCceee
Q 009903 230 AGG-GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLL 308 (523)
Q Consensus 230 ~g~-gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~~ 308 (523)
.|+ +|+|++++++.+|+.++++.+. ...+|+|+||+|.+|+++.++++.+|++..+...+. .........
T Consensus 154 ~gg~~g~Gv~~v~~~~el~~a~~~~~--------~~~~ivEe~i~g~~E~sv~~~~~~~g~~~~~~~~e~-~~~~g~~~~ 224 (377)
T 3orq_A 154 FGGYDGKGQVLINNEKDLQEGFKLIE--------TSECVAEKYLNIKKEVSLTVTRGNNNQITFFPLQEN-EHRNQILFK 224 (377)
T ss_dssp SSCCTTTTEEEECSTTSHHHHHHHHT--------TSCEEEEECCCEEEEEEEEEEECGGGCEEECCCEEE-EEETTEEEE
T ss_pred CCCCCCCCeEEECCHHHHHHHHHhcC--------CCcEEEEccCCCCEEEEEEEEEeCCCCEEEECCEeE-EEECCEEEE
Confidence 997 8999999999999999987753 378999999999789999999877788877755443 223333344
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcCC
Q 009903 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (523)
Q Consensus 309 ~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G~ 388 (523)
...|+. +++ .+++.+++.+++++||+.|++++||+++++|++||+|||||++++..++..++++|++++++++++|.
T Consensus 225 ~~~Pa~-l~~--~~~~~~~a~~i~~~lg~~G~~~ve~~~~~~g~~~v~EinpR~~~sg~~t~~~~~~s~f~~~~ra~~G~ 301 (377)
T 3orq_A 225 TIVPAR-IDK--TAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSGHYSIEACDYSQFDTHILAVTGQ 301 (377)
T ss_dssp EEESCS-SCC--HHHHHHHHHHHHTTSCCCEEEEEEEEEETTCCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHTTC
T ss_pred EECCCC-CCH--HHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCcEEEEEeeCCcCCCCcEeehhcCCCHHHHHHHHHcCC
Confidence 456765 666 78999999999999999999999999998888999999999998866776789999999999999999
Q ss_pred CCCC-CccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHHH
Q 009903 389 KLRY-KQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREK 467 (523)
Q Consensus 389 ~~~~-~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~e 467 (523)
+++. . .....+++..+++... .+.-..+. ..|++. +++|.....++ .+++|+|.+.|+|.++
T Consensus 302 pl~~~~----~~~~~~~m~n~lg~~~-------~~~~~~~~--~~~~~~--~~~ygk~~~~~--~rkmGhv~~~~~~~~~ 364 (377)
T 3orq_A 302 SLPNSI----ELLKPAVMMNLLGKDL-------DLLENEFN--EHPEWH--LHIYGKSERKD--SRKMGHMTVLTNDVNQ 364 (377)
T ss_dssp CCCSCC----CBSSCEEEEEEEHHHH-------HHHGGGGG--GCGGGC--EEECCCSSCCT--TSEEEEEEEECSCHHH
T ss_pred CCCccc----cccccEEEEEEeCccc-------hhHHHHHh--hCCCCE--EEECCCCCCCC--CCeeEEEEEEcCCHHH
Confidence 8864 3 2344578888876421 00000111 123443 46666544444 4779999999999999
Q ss_pred HHHHHHHH
Q 009903 468 AIERMKRA 475 (523)
Q Consensus 468 a~~~~~~~ 475 (523)
+++++..-
T Consensus 365 ~~~~~~~~ 372 (377)
T 3orq_A 365 TEQDMYAK 372 (377)
T ss_dssp HHHHHHHH
T ss_pred HHHHhHHh
Confidence 99888653
No 26
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=100.00 E-value=4.2e-42 Score=361.14 Aligned_cols=390 Identities=15% Similarity=0.156 Sum_probs=288.9
Q ss_pred ccCCCccEEEEEcCcHHHHHHHHHHHHcC-CcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009903 66 KVTCRQEKILVANRGEIAVRVIRTAHEMG-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (523)
Q Consensus 66 ~~~~~~k~ILi~g~g~~~~~vi~aa~~~G-~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 144 (523)
+-.++.+||||+|+|.....++.++++.+ +..+++.+ ..+.....++.+.+ ++.|.+.+++++++.++
T Consensus 16 ~~~p~~m~ilvlG~ggre~ala~~l~~s~~v~~v~~~p----gn~g~~~~~~~~~i-------~~~d~~~l~~~a~~~~i 84 (442)
T 3lp8_A 16 TQGPGSMNVLVIGSGGREHSMLHHIRKSTLLNKLFIAP----GREGMSGLADIIDI-------DINSTIEVIQVCKKEKI 84 (442)
T ss_dssp ----CCEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEE----CCGGGTTTSEECCC-------CTTCHHHHHHHHHHTTC
T ss_pred cCCCCCCEEEEECCChHHHHHHHHHHhCCCCCEEEEEC----CChHHhhccceeec-------CcCCHHHHHHHHHHhCC
Confidence 34567889999999988888999998874 45555532 22333344554444 47899999999999999
Q ss_pred CEEEeCCCcccccH---HHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcC
Q 009903 145 TMLHPGYGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELG 221 (523)
Q Consensus 145 d~Vi~~~g~~~e~~---~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g 221 (523)
|+|+++. |.. .+++.+++.|++++||+.++++++.||..++++|+++|||+|++ ..+.+.+++.+++++++
T Consensus 85 d~vv~g~----E~~l~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~--~~~~~~~ea~~~~~~~g 158 (442)
T 3lp8_A 85 ELVVIGP----ETPLMNGLSDALTEEGILVFGPSKAAARLESSKGFTKELCMRYGIPTAKY--GYFVDTNSAYKFIDKHK 158 (442)
T ss_dssp CEEEECS----HHHHHTTHHHHHHHTTCEEESCCHHHHHHHHCHHHHHHHHHHHTCCBCCE--EEESSHHHHHHHHHHSC
T ss_pred CEEEECC----cHHHHHHHHHHHHhcCCcEecCCHHHHHHhhCHHHHHHHHHHCCCCCCCE--EEECCHHHHHHHHHHcC
Confidence 9999864 443 46788999999999999999999999999999999999999999 78999999999999999
Q ss_pred CcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeec-e
Q 009903 222 FPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERD-C 298 (523)
Q Consensus 222 ~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~-~ 298 (523)
||+||||..++||+||+++++.+|+.++++++... ..++ ...++|||||+| +|+++.++.|++ .++.+...+ .
T Consensus 159 ~PvVvKp~~~~gg~GV~iv~~~eel~~a~~~~~~~--~~~g~~~~~vlvEe~i~G-~E~sv~~~~dg~-~~~~~~~~~~~ 234 (442)
T 3lp8_A 159 LPLVVKADGLAQGKGTVICHTHEEAYNAVDAMLVH--HKFGEAGCAIIIEEFLEG-KEISFFTLVDGS-NPVILGVAQDY 234 (442)
T ss_dssp SSEEEEESSCCTTTSEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCCS-EEEEEEEEEESS-CEEEEEEEEEC
T ss_pred CcEEEeECCCCCCCeEEEeCCHHHHHHHHHHHHhh--cccCCCCCeEEEEEeecC-cEEEEEEEECCC-eEEEeEEeEee
Confidence 99999999999999999999999999999887531 1122 268999999999 999999999865 555443321 1
Q ss_pred -ee-----eecCceeeEecCCCCCCHHHHHHHHHH----HHHHHHHcCC--ccccEEEEEEeCCCCEEEEEEecCCCCC-
Q 009903 299 -SI-----QRRNQKLLEEAPSPALTPELRKAMGDA----AVAAAASIGY--IGVGTVEFLLDERGSFYFMEMNTRIQVE- 365 (523)
Q Consensus 299 -~~-----~~~~~~~~~~~p~~~l~~~~~~~l~~~----a~~~~~alg~--~G~~~vE~~~~~~G~~~liEiNpR~~g~- 365 (523)
.. ..+......++|++.++++..+++.+. +.++++++|+ .|++++||+++++| ++|||+|||+|+.
T Consensus 235 ~~~~~~~~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~a~~~~~a~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~ 313 (442)
T 3lp8_A 235 KTIGDNNKGPNTGGMGSYSKPNIITQEMEHIIIQKIIYPTIKAMFNMNIQFRGLLFAGIIIKKNE-PKLLEYNVRFGDPE 313 (442)
T ss_dssp CEEEGGGEEEECSCSEEEECTTSSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTH
T ss_pred eecccCCCCCCCCCcEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-eEEEEEecCCCCCc
Confidence 11 111222345678776899999999887 8889999988 69999999999999 9999999999865
Q ss_pred ccceeeecCCCHHHHHHHHHcCCCCCCCccccccc-eeEEEEEEeeCCCCCCCCCC--Cc-eEEEEec-CCCCcEEE-ee
Q 009903 366 HPVTEMISSVDLIEEQIHVAMGGKLRYKQEDIVLQ-GHSIECRINAEDPFKNFRPG--PG-RITAYLP-AGGPFVRM-DS 439 (523)
Q Consensus 366 ~~~~~~~~Gidl~~~~~~~~~G~~~~~~~~~~~~~-~~ai~~~~~a~~~~~~~~~~--~g-~v~~~~~-~~~~~v~~-~~ 439 (523)
...+...++.|+++.+++++.|...+.. ..+. .+++.+.+.+. +++.. .| .|..+.. ...+++.+ ..
T Consensus 314 ~~~~~~~~~~dl~~~~~~~~~G~l~~~~---~~~~~~~a~~vv~a~~----gyp~~~~~g~~i~g~~~~~~~~~~~~~~a 386 (442)
T 3lp8_A 314 TQSILPRLNSDFLKLLSLTAKGKLGNES---VELSKKAALCVVVASR----GYPGEYKKNSIINGIENIEKLPNVQLLHA 386 (442)
T ss_dssp HHHHGGGBCSCHHHHHHHHHHTCCSSCC---CCBCSCEEEEEEEEET----TTTSSCCSSCEEBSHHHHHTCSSEEEEES
T ss_pred hhhhHHHhCCCHHHHHHHHHcCCCCCCC---ceeccCcEEEEEEccC----CCCCCCCCCCEeeCCcccccCCCcEEEEe
Confidence 4445555789999999999999743321 2222 33444433332 22211 22 2332211 22244432 11
Q ss_pred --eecCCcccCCCCCcceEEEEEEcCCHHHHHHHHHHHhhcCeEeeccc
Q 009903 440 --HVYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPT 486 (523)
Q Consensus 440 --~~~~G~~v~~~~~~~iG~vi~~g~s~~ea~~~~~~~~~~i~i~~~~~ 486 (523)
....|..+ .+ +.+++.|++.|+|.++|+++++++++.|.++|.++
T Consensus 387 g~~~~~~~~~-~~-ggRv~~v~~~g~~~~~A~~~a~~~~~~i~~~~~~~ 433 (442)
T 3lp8_A 387 GTRREGNNWV-SD-SGRVINVVAQGENLASAKHQAYAALDLLDWPDGIY 433 (442)
T ss_dssp SEEEETTEEE-EC-SSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEC
T ss_pred eeeccCCeEE-ec-CCeEEEEEEecCCHHHHHHHHHHHhcccCCCCCcc
Confidence 11123222 22 34599999999999999999999999999998765
No 27
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=100.00 E-value=1.7e-42 Score=352.37 Aligned_cols=338 Identities=16% Similarity=0.185 Sum_probs=271.8
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
||+|+|+|+|..|++++.+|+++|++| ++++.+ ++. ++ + . + ++|+|++.
T Consensus 1 Mk~igilGgGqlg~m~~~aa~~lG~~v--~~~~~~--a~~------~~-~----------~------l----~~d~it~e 49 (355)
T 3eth_A 1 MKQVCVLGNGQLGRMLRQAGEPLGIAV--WPVGLD--AEP------AA-V----------P------F----QQSVITAE 49 (355)
T ss_dssp CCEEEEESCSHHHHHHHHHHGGGTCEE--EEECTT--CCG------GG-C----------C------C----TTSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEE--ECCCCC--CCc------eE-E----------c------c----cCCEEEEC
Confidence 568999999999999999999999999 443433 221 11 1 1 1 79999998
Q ss_pred CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeCC
Q 009903 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (523)
Q Consensus 151 ~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~~ 230 (523)
+++... ..++.+++.| .++|+++++..+.||..+|++|+++|||+|++ ..+.+.+++.++++++|||+||||..
T Consensus 50 ~e~v~~--~~l~~l~~~~--~v~p~~~a~~~~~DK~~~k~~l~~~GIptp~~--~~v~~~~e~~~~~~~~G~P~VvKp~~ 123 (355)
T 3eth_A 50 IERWPE--TALTRQLARH--PAFVNRDVFPIIADRLTQKQLFDKLHLPTAPW--QLLAERSEWPAVFDRLGELAIVKRRT 123 (355)
T ss_dssp CSCCCC--CHHHHHHHTC--TTBTTTTHHHHHHSHHHHHHHHHHTTCCBCCE--EEECCGGGHHHHHHHHCSEEEEEESS
T ss_pred cCCcCH--HHHHHHHhcC--CcCCCHHHHHHhcCHHHHHHHHHHCccCCCCE--EEECCHHHHHHHHHHcCCCEEEEecC
Confidence 876543 4566777777 36899999999999999999999999999999 78999999999999999999999998
Q ss_pred C-CCCCceEEeCC--HHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeeeecCcee
Q 009903 231 G-GGGRGMRLAKE--PDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKL 307 (523)
Q Consensus 231 g-~gs~Gv~~v~~--~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~ 307 (523)
+ ++|+|++++++ .+|+.+++ ++ ++|+|+||++.+|+++.++++.+|++..+...+. ....+...
T Consensus 124 ~G~~GkGv~~v~~~~~~el~~a~----------~~--~vivEe~I~~~~Eisv~v~~~~~G~~~~~p~~e~-~~~~g~~~ 190 (355)
T 3eth_A 124 GGYDGRGQWRLRANETEQLPAEC----------YG--ECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHN-LHQDGILR 190 (355)
T ss_dssp SCCTTTTEEEEETTCGGGSCGGG----------TT--TEEEEECCCCSEEEEEEEEECTTSCEEECCCEEE-EEETTEEE
T ss_pred CCCCCCeEEEEcCCCHHHHHHHh----------hC--CEEEEEccCCCcEEEEEEEEcCCCCEEEECCEEE-EeeCCeEE
Confidence 5 88999999999 99987743 22 6999999996599999999998888877654432 23333333
Q ss_pred eEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcC
Q 009903 308 LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMG 387 (523)
Q Consensus 308 ~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G 387 (523)
....|+ .++++..+++.+++.+++++||+.|++++||++++++ +||+|||||++++.+++..++++|++++++++++|
T Consensus 191 ~~~~pa-~l~~~~~~~~~~~a~~i~~aLg~~G~~~vEf~~~~~~-~~v~EinpR~~~sg~~t~~~~~~s~fe~~~ra~~G 268 (355)
T 3eth_A 191 TSVAFP-QANAQQQARAEEMLSAIMQELGYVGVMAMECFVTPQG-LLINELAPRVHNSGHWTQNGASISQFELHLRAITD 268 (355)
T ss_dssp EEEECS-SCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTE-EEEEEEESSCCGGGTTHHHHSSSCHHHHHHHHHTT
T ss_pred EEECCC-CCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEECCc-EEEEEeeCCCCCCccEEeeeecCCHHHHHHHHHcC
Confidence 334455 4899999999999999999999999999999999754 99999999999888888889999999999999999
Q ss_pred CCCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHHH
Q 009903 388 GKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREK 467 (523)
Q Consensus 388 ~~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~e 467 (523)
.+++... ....++++.+++++. ...+ ...|++. +++|.. .+++ .+++|+|.+.|+|.++
T Consensus 269 ~pl~~~~----~~~~~~m~nilg~~~----------~~~~--~~~p~~~--~~~ygk-~~r~--~rkmGhv~~~~~~~~~ 327 (355)
T 3eth_A 269 LPLPQPV----VNNPSVMINLIGSDV----------NYDW--LKLPLVH--LHWYDK-EVRP--GRKVGHLNLTDSDTSR 327 (355)
T ss_dssp CCCCCCC----CCSCEEEEEEESCCC----------CGGG--GGSTTCE--EEECCC-CCCT--TCEEEEEEEECSCHHH
T ss_pred CCCCCcc----ccCceEEEEEecchH----------HHHH--HhCCCCE--EEEcCC-CCCC--CCeeEEEEEEcCCHHH
Confidence 9885432 345588888887531 1111 1234444 566755 5555 5789999999999999
Q ss_pred HHHHHHHHhhcCeE
Q 009903 468 AIERMKRALNDTII 481 (523)
Q Consensus 468 a~~~~~~~~~~i~i 481 (523)
+.++++++.+.+.-
T Consensus 328 ~~~~~~~~~~~~~~ 341 (355)
T 3eth_A 328 LTATLEALIPLLPP 341 (355)
T ss_dssp HHHHHHHHGGGSCG
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999998743
No 28
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=100.00 E-value=1.4e-42 Score=356.82 Aligned_cols=361 Identities=15% Similarity=0.191 Sum_probs=235.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
||+|+|+|+|.++..++++++++|+++++++++ ...+...++|+.+..+ .+.+++ .++|+|++.
T Consensus 1 M~~Ililg~g~~~~~~~~a~~~~G~~v~~~~~~--~~~~~~~~~~~~~~~~------------~l~~~~--~~~d~v~~~ 64 (365)
T 2z04_A 1 MLTVGILGGGQLGWMTILEGRKLGFKFHVLEDK--ENAPACRVADRCFRTG------------QISEFV--DSCDIITYE 64 (365)
T ss_dssp -CEEEEECCSHHHHHHHHHHGGGTCEEEEECSS--SSCHHHHHSSEEECGG------------GHHHHH--HHCSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC--CCCchhhhccceeeHH------------HHHHHh--hcCCEEEEC
Confidence 478999999999999999999999999999543 3445567788776421 566777 469999987
Q ss_pred CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeCC
Q 009903 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (523)
Q Consensus 151 ~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~~ 230 (523)
++.. ...+++.++. ++||+++++..+.||..++++|+++|||+|++ ..+. .+++.+++++++||+|+||..
T Consensus 65 ~e~~--~~~~~~~l~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~~~-~~~~~~~~~~~~~P~vvKp~~ 135 (365)
T 2z04_A 65 FEHI--KDEVLEKCES----KLIPNPQALYVKKSRIREKLFLKKHGFPVPEF--LVIK-RDEIIDALKSFKLPVVIKAEK 135 (365)
T ss_dssp SSCC--CHHHHHHHTT----TBSSCTHHHHHHTCHHHHHHHHHTTTCCCCCE--EEC---------------CEEEECC-
T ss_pred CCCC--cHHHHHHHhh----hcCCCHHHHHHhhCHHHHHHHHHHcCCCCCCE--EEEc-HHHHHHHHHhcCCCEEEEEcC
Confidence 6432 1234444433 57999999999999999999999999999999 6677 888888889999999999999
Q ss_pred CC-CCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccC-CCcEEEEEEEEeCCCcEEEEeeeceeeeecCceee
Q 009903 231 GG-GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQ-NPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLL 308 (523)
Q Consensus 231 g~-gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~-G~~e~sv~v~~d~~g~v~~~~~~~~~~~~~~~~~~ 308 (523)
|+ +|+||+++++.+|+.++++.+.. +..+++||||+ | +|+++.++.|++|+++.+...+.. ...+....
T Consensus 136 ~~~~g~Gv~~v~~~~el~~~~~~~~~-------~~~~lvEe~i~~g-~e~sv~~~~d~~G~~~~~~~~~~~-~~~~~~~~ 206 (365)
T 2z04_A 136 LGYDGKGQYRIKKLEDANQVVKNHDK-------EESFIIEEFVKFE-AEISCIGVRDREGKTYFYPQPFNK-HEEGILIY 206 (365)
T ss_dssp ------------------------------------CEEEECCCCS-EEEEEEEEECTTCCEEECCEEEEE-EETTEEEE
T ss_pred CCcCCCCeEEECCHHHHHHHHHHhcc-------CCCEEEEccCCCC-EEEEEEEEECCCCCEEEECCEEEE-EeCCEeEE
Confidence 99 99999999999999998876532 37899999999 7 999999999878888776554432 22222223
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcCC
Q 009903 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (523)
Q Consensus 309 ~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G~ 388 (523)
...|++ + .+++.+++.+++++||+.|++++||+++++|+++++|||||++++...+..++|+|+++.+++.++|.
T Consensus 207 ~~~p~~-~----~~~~~~~~~~~~~~lg~~G~~~vd~~~~~~g~~~~iEiN~R~~~~~~~~~~~~~~~~~~~~~~~~~g~ 281 (365)
T 2z04_A 207 NYVPYA-K----LKEAEEITKRLMELLDIVGVFTVEFFLLKDGRVLINEFAPRVHNTGHWTLDGAYTSQFENLLRAITEM 281 (365)
T ss_dssp EEEEEE-C----CHHHHHHHHHHHHHTTCCEEEEEEEEECTTSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHTTC
T ss_pred EECCHh-H----HHHHHHHHHHHHHHcCCEEEEEEEEEEeCCCcEEEEEeccCcCCCceEEeeccccCHHHHHHHHHhCC
Confidence 345554 3 56788999999999999999999999998889999999999987543455679999999999999999
Q ss_pred CCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcccCCCCCcceEEEEEEcCCHHHH
Q 009903 389 KLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKA 468 (523)
Q Consensus 389 ~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~v~~~~~~~iG~vi~~g~s~~ea 468 (523)
+++.... . ..++++++++++. . | +.+..+ ...|++++ +++ |..+. .++++|+|+++|+|.++|
T Consensus 282 ~l~~~~~---~-~~~~~~~~~~~~~---~-~--~~~~~~--~~~~~~~~--~~~-g~~~~--~~~~lg~v~~~g~~~~~a 344 (365)
T 2z04_A 282 PLGSTEL---K-LPSGMVNILGKSY---E-E--IPLKEI--LSVEGAKL--YWY-GKEKK--PRRKVGHVNVVGRSKEEV 344 (365)
T ss_dssp CCCCCCB---S-SCEEEEEEESCCG---G-G--SCHHHH--TTSTTEEE--EEC-CCCCC--TTCEEEEEEEECSSHHHH
T ss_pred CCCCccc---c-CCEEEEEEECCcc---c-c--chHHHH--hcCCCCEE--Eec-CCCCC--CCCeEEEEEEecCCHHHH
Confidence 8865432 1 2366777777532 1 1 222222 22355543 444 54322 257799999999999999
Q ss_pred HHHHHHHhhcCeEeecccC
Q 009903 469 IERMKRALNDTIITGVPTT 487 (523)
Q Consensus 469 ~~~~~~~~~~i~i~~~~~~ 487 (523)
.++++++++.|.++|+..+
T Consensus 345 ~~~~~~~~~~i~~~~~~~~ 363 (365)
T 2z04_A 345 VEKVERVFTLLKGSREKLP 363 (365)
T ss_dssp HHHHHHHHHC---------
T ss_pred HHHHHHHHHHhhhccCCCC
Confidence 9999999999999998653
No 29
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=3.1e-41 Score=352.96 Aligned_cols=380 Identities=18% Similarity=0.201 Sum_probs=280.9
Q ss_pred cEEEEEcCcHHHHHHHHHH-HHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 72 EKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 72 k~ILi~g~g~~~~~vi~aa-~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
|||||+|+|.....++.++ +++|++++++++. ++. ...+++ ++. ++.|.+.+++++++.++|+|+++
T Consensus 1 mkililG~g~r~~a~a~~l~~~~g~~~v~~~~~-~~~--~~~~~~-~~~--------~~~d~~~l~~~~~~~~~d~v~~~ 68 (417)
T 2ip4_A 1 MKVLVVGSGGREHALLWKAAQSPRVKRLYAAPG-NAG--MEALAE-LVP--------WNGDVEALADWALAEGIDLTLVG 68 (417)
T ss_dssp CEEEEEESSHHHHHHHHHHHTCSSCCEEEEEEC-CTT--GGGTSE-ECC--------CCSCHHHHHHHHHHHTCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEECC-Ccc--hhhhcc-cCC--------CccCHHHHHHHHHHcCCCEEEEC
Confidence 4799999996666666666 4579998888643 221 222333 221 47889999999999999999987
Q ss_pred CCcccccH---HHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEE
Q 009903 151 YGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (523)
Q Consensus 151 ~g~~~e~~---~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvK 227 (523)
. |+. .+++.+++.|++++||+.++++.+.||..++++|+++|||+|++ ..+.+.+++.+++++++||+|||
T Consensus 69 ~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~~~~~~~~~~~~~~~~~P~vvK 142 (417)
T 2ip4_A 69 P----EAPLVEGIADAFQARGLLLFGPTQKAAMIEGSKAFAKGLMERYGIPTARY--RVFREPLEALAYLEEVGVPVVVK 142 (417)
T ss_dssp S----SHHHHTTHHHHHHHHTCCEESCCHHHHHHHHCHHHHHHHHHHTCCCBCCE--EEESSHHHHHHHHHHHCSSEEEE
T ss_pred C----chHHHHHHHHHHHHCCCCEECccHHHHHHHcCHHHHHHHHHHcCCCCCCe--eeeCCHHHHHHHHHHcCCCEEEE
Confidence 5 333 46678889999999999999999999999999999999999999 78899999999999999999999
Q ss_pred eCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeec--eee-----
Q 009903 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERD--CSI----- 300 (523)
Q Consensus 228 P~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~--~~~----- 300 (523)
|..|++|+||+++++.+|+.++++.+.. ..++ ..+++||||+| .|+++.++.+++ .+..+...+ ...
T Consensus 143 p~~~~gg~Gv~~v~~~~el~~~~~~~~~---~~~~-~~~lvEe~i~g-~E~sv~~~~~G~-~~~~~~~~~~~~~~~~~~~ 216 (417)
T 2ip4_A 143 DSGLAAGKGVTVAFDLHQAKQAVANILN---RAEG-GEVVVEEYLEG-EEATVLALTDGE-TILPLLPSQDHKRLLDGDQ 216 (417)
T ss_dssp CTTSCSSTTCEEESCHHHHHHHHHHHTT---SSSC-CCEEEEECCCS-CEEEEEEEESSS-CEEECCCBEECCEEETTTE
T ss_pred ECCCCCCCCEEEeCCHHHHHHHHHHHHh---hccC-CeEEEEECccC-cEEEEEEEEeCC-EEEEcchheechhhccCCC
Confidence 9999999999999999999999987641 1122 68999999999 899999998644 344332211 011
Q ss_pred eecCceeeEecCCCCCCHHHHHHH-HHHHHHHHHHc-----CCccccEEEEEEeCCCCEEEEEEecCCCCCc-cceeeec
Q 009903 301 QRRNQKLLEEAPSPALTPELRKAM-GDAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVEH-PVTEMIS 373 (523)
Q Consensus 301 ~~~~~~~~~~~p~~~l~~~~~~~l-~~~a~~~~~al-----g~~G~~~vE~~~~~~G~~~liEiNpR~~g~~-~~~~~~~ 373 (523)
..+........|++ ++++..+++ .+++.+++++| ++.|++|+||+++++| +||+|||||++++. ..+...+
T Consensus 217 ~~~~g~~~~~~p~~-l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~~~i~~~~ 294 (417)
T 2ip4_A 217 GPMTGGMGAVAPYP-MDEATLRRVEEEILGPLVRGLRAEGVVYRGVVYAGLMLTREG-PKVLEFNARFGDPEAQALLPLL 294 (417)
T ss_dssp EEECSCSEEEESCC-CCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEECSSC-EEEEEEESSCCTTHHHHHTTTB
T ss_pred CCcCCCCeeeeCCC-CCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEEeCCC-eEEEEEecCCCCcHHHHHHHHh
Confidence 01111233457877 899988888 66677777765 6779999999999999 99999999998763 3445568
Q ss_pred CCCHHHHHHHHHcCCCCCCCccccc-cceeEEEEEEeeCCCCCCCCCCCce-EEEEecCCCCcEEEeeeecCCcccCC--
Q 009903 374 SVDLIEEQIHVAMGGKLRYKQEDIV-LQGHSIECRINAEDPFKNFRPGPGR-ITAYLPAGGPFVRMDSHVYPDYVVPP-- 449 (523)
Q Consensus 374 Gidl~~~~~~~~~G~~~~~~~~~~~-~~~~ai~~~~~a~~~~~~~~~~~g~-v~~~~~~~~~~v~~~~~~~~G~~v~~-- 449 (523)
|+|+.+.+++++.|..... +.. ..++++.+++.++++.. .+..|. +..+... +++++ +. .|..+..
T Consensus 295 g~d~~~~~~~~~~g~l~~~---~~~~~~~~~~~~~l~~~~~~~--~~~~g~~i~~~~~~--~~v~~--~~-~g~~~~~~~ 364 (417)
T 2ip4_A 295 ENDLVELALRVAEGRLAGT---RLSWKEGAAACVVLAAPGYPE--SPRKGIPLHVPEPP--EGVLV--FH-AGTRREGGR 364 (417)
T ss_dssp CSCHHHHHHHHHHTCGGGC---CCCBCSSEEEEEEEECTTTTT--SCCCCCBCBCCCCC--TTEEE--EE-SSEEESSSS
T ss_pred CCCHHHHHHHHHcCCCCcC---CccccCCcEEEEEEeCCCCCC--CCCCCCcccccCCC--CCeEE--EE-CceEeeCCe
Confidence 9999999999999973221 122 22456666665543221 233444 3333221 45543 22 4543321
Q ss_pred --CCCcceEEEEEEcCCHHHHHHHHHHHhhcCeEeecccC
Q 009903 450 --SYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPTT 487 (523)
Q Consensus 450 --~~~~~iG~vi~~g~s~~ea~~~~~~~~~~i~i~~~~~~ 487 (523)
....++|+|+++|+|.++|+++++++++.|+++|.++.
T Consensus 365 ~~~~~~rv~~v~~~g~~~~~a~~~~~~~~~~i~~~~~~~r 404 (417)
T 2ip4_A 365 LVSAGGRVLNVVGLGRDLKEALERAYAYIPQVGFPGAVYR 404 (417)
T ss_dssp EEECSSEEEEEEEEESSHHHHHHHHHHHGGGSBCTTCBCC
T ss_pred EEecCCcEEEEEEEcCCHHHHHHHHHHHHhcCccCCcEEc
Confidence 11234999999999999999999999999999987764
No 30
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=100.00 E-value=5.7e-42 Score=362.12 Aligned_cols=394 Identities=17% Similarity=0.190 Sum_probs=280.8
Q ss_pred ccCCCccEEEEEcCcHHHHHHHHHH-HHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009903 66 KVTCRQEKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (523)
Q Consensus 66 ~~~~~~k~ILi~g~g~~~~~vi~aa-~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 144 (523)
.++.|+++|||+|+|.....+++.+ +++|++++++++.. ..+. .+++ ...+. .++.|.+.+++++++.++
T Consensus 19 ~~~~m~~~IlIlG~g~r~~al~~~~a~~~g~~~v~~~~~~--~~~~-~~~~-~~~~~-----~~~~d~~~l~~~~~~~~~ 89 (452)
T 2qk4_A 19 YFQSMAARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGN--AGTA-CSEK-ISNTA-----ISISDHTALAQFCKEKKI 89 (452)
T ss_dssp ---CCSEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEECC--GGGS-BSSS-EEECC-----CCSSCHHHHHHHHHHHTC
T ss_pred cccccCcEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCC--hhhh-hhcc-ccccc-----cCCCCHHHHHHHHHHcCC
Confidence 3455778999999996555565554 56799987775432 2222 3333 21221 247889999999999999
Q ss_pred CEEEeCCCcccccH---HHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcC
Q 009903 145 TMLHPGYGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELG 221 (523)
Q Consensus 145 d~Vi~~~g~~~e~~---~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g 221 (523)
|+|+++. |+. .+++.+++.|++++||++++++.+.||..++++|+++|||+|++ ..+.+.+++.+++++++
T Consensus 90 d~V~~~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~~g 163 (452)
T 2qk4_A 90 EFVVVGP----EAPLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIPTAQW--KAFTKPEEACSFILSAD 163 (452)
T ss_dssp CEEEECS----SHHHHTTHHHHHHHTTCCEESCCTTTTHHHHBHHHHHHHHHHTTCCBCCE--EEESSHHHHHHHHHHCS
T ss_pred CEEEECC----cHHHHHHHHHHHHhcCCcEeCcCHHHHHHhcCHHHHHHHHHHCCCCCCCe--EEECCHHHHHHHHHhCC
Confidence 9999865 443 56678889999999999999999999999999999999999999 78899999999999999
Q ss_pred Cc-EEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeece
Q 009903 222 FP-VMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDC 298 (523)
Q Consensus 222 ~P-~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~ 298 (523)
|| +||||..++||+||+++++.+|+.++++.+... ..++ ...++|||||+| .|+++.++.+++ .++.+...+.
T Consensus 164 ~P~vvvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~G-~E~sv~~~~dG~-~~~~~~~~~~ 239 (452)
T 2qk4_A 164 FPALVVKASGLAAGKGVIVAKSKEEACKAVQEIMQE--KAFGAAGETIVIEELLDG-EEVSCLCFTDGK-TVAPMPPAQD 239 (452)
T ss_dssp SCEEEEEESBC---CCEEECSSHHHHHHHHHHHTTC---------CCEEEEECCCS-EEEEEEEEECSS-CEEECCCBEE
T ss_pred CCeEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCCC-CeEEEEEEECCC-EEEEcceeee
Confidence 99 999999999999999999999999999876431 1122 368999999999 999999998643 3554433211
Q ss_pred --eee-----ecCceeeEecCCCCCCHHHHHHHH-HHHHHHHHHc-----CCccccEEEEEEeCCCCEEEEEEecCCCCC
Q 009903 299 --SIQ-----RRNQKLLEEAPSPALTPELRKAMG-DAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVE 365 (523)
Q Consensus 299 --~~~-----~~~~~~~~~~p~~~l~~~~~~~l~-~~a~~~~~al-----g~~G~~~vE~~~~~~G~~~liEiNpR~~g~ 365 (523)
... ..........|++.++++..+++. +++.+++++| ++.|++++||+++++| +||+|||||++++
T Consensus 240 ~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~~~~~~a~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~~~~ 318 (452)
T 2qk4_A 240 HKRLLEGDGGPNTGGMGAYCPAPQVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGILYAGIMLTKNG-PKVLEFNCRFGDP 318 (452)
T ss_dssp EEEEETTTEEEEEEEEEEEESCTTCCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEEETTE-EEEEEEESSCCTT
T ss_pred cccccCCCCCCCCCCceeeccCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-cEEEEEeccCCCc
Confidence 111 111123345677658898888886 6777777665 5679999999999999 9999999999876
Q ss_pred c-cceeeecCCCHHHHHHHHHcCCCCCCCccccc-ccee-EEEEEEeeCCCCCCCCCCCc-eEEEEecCCCCcEEEeeee
Q 009903 366 H-PVTEMISSVDLIEEQIHVAMGGKLRYKQEDIV-LQGH-SIECRINAEDPFKNFRPGPG-RITAYLPAGGPFVRMDSHV 441 (523)
Q Consensus 366 ~-~~~~~~~Gidl~~~~~~~~~G~~~~~~~~~~~-~~~~-ai~~~~~a~~~~~~~~~~~g-~v~~~~~~~~~~v~~~~~~ 441 (523)
. ..+...+|+|+.+.+++++.|. ++.. +.. ..++ ++.+++.++++.. .+..| .+..+.....+++++ +
T Consensus 319 ~~~~i~~~~g~d~~~~~~~~~~g~-l~~~--~~~~~~~~~a~~~~l~~~g~~~--~~~~g~~i~~l~~~~~~~v~~--~- 390 (452)
T 2qk4_A 319 ECQVILPLLKSDLYEVIQSTLDGL-LCTS--LPVWLENHTALTVVMASKGYPG--DYTKGVEITGFPEAQALGLEV--F- 390 (452)
T ss_dssp THHHHGGGBCSCHHHHHHHHHTTC-GGGG--CCCBCTTCEEEEEEEECTTTTS--SCCCSCBCBCHHHHHHTTCEE--E-
T ss_pred HHHHHHHHhCCCHHHHHHHHHcCC-CCcc--cceecCCCcEEEEEEECCCCCC--CCCCCCcccCccccCCCCcEE--E-
Confidence 3 2355568999999999999986 3221 122 2244 6666676653321 23334 333332111234443 1
Q ss_pred cCCcccC----CCCCcceEEEEEEcCCHHHHHHHHHHHhhcCeEeecccC
Q 009903 442 YPDYVVP----PSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPTT 487 (523)
Q Consensus 442 ~~G~~v~----~~~~~~iG~vi~~g~s~~ea~~~~~~~~~~i~i~~~~~~ 487 (523)
..|..+. ....+++|+|+++|+|.++|+++++++++.|.++|.++.
T Consensus 391 ~~G~~~~~~~~~~~~~rv~~v~~~g~~~~~a~~~~~~~~~~i~~~g~~~r 440 (452)
T 2qk4_A 391 HAGTALKNGKVVTHGGRVLAVTAIRENLISALEEAKKGLAAIKFEGAIYR 440 (452)
T ss_dssp ESSEEEETTEEEECSSEEEEEEEEESSHHHHHHHHHHHHHHCBCTTCBCC
T ss_pred ECcEEeeCCeEEecCCeEEEEEEecCCHHHHHHHHHHHHhhcccCCcEEc
Confidence 1444321 112346999999999999999999999999999988764
No 31
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=100.00 E-value=2.3e-41 Score=354.63 Aligned_cols=397 Identities=16% Similarity=0.159 Sum_probs=285.5
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCccccccC-eeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKLAD-ESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~-~vi~v~~~~~~~~~~~~~ad-~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
++||||+|+|.....++.++++.+. ..+++. ..++. ....++ ..+.+ ++.|.+.+++++++.++|+|+
T Consensus 3 ~mkvlviG~ggre~ala~~l~~s~~v~~v~~~-pgn~g--~~~~~~~~~~~~-------~~~d~~~l~~~a~~~~id~vv 72 (431)
T 3mjf_A 3 AMNILIIGNGGREHALGWKAAQSPLADKIYVA-PGNAG--TALEPTLENVDI-------AATDIAGLLAFAQSHDIGLTI 72 (431)
T ss_dssp CEEEEEEECSHHHHHHHHHHTTCTTEEEEEEE-ECCHH--HHHCTTCEECCC-------CTTCHHHHHHHHHHTTEEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCCEEEEE-CCCHH--HhhhcccceecC-------CcCCHHHHHHHHHHhCcCEEE
Confidence 4789999999888889999988864 333332 11211 112222 11222 477899999999999999999
Q ss_pred eCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEe
Q 009903 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKA 228 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP 228 (523)
++.+... ...+++.+++.|++++||+.++++++.||..++++|+++|||+|++ ..+.+.+++.+++++++||+||||
T Consensus 73 ~g~e~~l-~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIptp~~--~~~~~~~ea~~~~~~~g~PvVvKp 149 (431)
T 3mjf_A 73 VGPEAPL-VIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSAEY--QNFTDVEAALAYVRQKGAPIVIKA 149 (431)
T ss_dssp ECSHHHH-HTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCSBCCE--EEESCHHHHHHHHHHHCSSEEEEE
T ss_pred ECCchHH-HHHHHHHHHhcCCCeeCCCHHHHHHhhCHHHHHHHHHHcCCCCCCe--EeeCCHHHHHHHHHHcCCeEEEEE
Confidence 8753210 1246788999999999999999999999999999999999999999 789999999999999999999999
Q ss_pred CCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeece--eee-----
Q 009903 229 TAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDC--SIQ----- 301 (523)
Q Consensus 229 ~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~--~~~----- 301 (523)
..+++|+||+++++.+|+.++++.+............++|||||+| .|+++.++.|++ +++.+..... ...
T Consensus 150 ~~~~gg~GV~iv~~~~el~~a~~~~~~~~~~g~~~~~vlvEe~i~G-~E~sv~~~~dg~-~~~~~~~~~~~~~~~~~~~g 227 (431)
T 3mjf_A 150 DGLAAGKGVIVAMTQEEAETAVNDMLAGNAFGDAGHRIVVEEFLDG-EEASFIVMVDGE-NVLPMATSQDHKRVGDGDTG 227 (431)
T ss_dssp SSSCTTCSEEEECSHHHHHHHHHHHHTTHHHHCCCCCEEEEECCCS-EEEEEEEEEESS-CEEECCCBEECCEEETTTEE
T ss_pred CCCCCCCcEEEeCCHHHHHHHHHHHHhhccccCCCCeEEEEEeeCC-cEEEEEEEEcCC-EEEEEEeeEeceecccCCCC
Confidence 9999999999999999999999887632111111358999999999 999999999865 6666543211 111
Q ss_pred ecCceeeEecCCCCCCHHHHHHHHHH----HHHHHHHcCC--ccccEEEEEEeCCCCEEEEEEecCCCCC-ccceeeecC
Q 009903 302 RRNQKLLEEAPSPALTPELRKAMGDA----AVAAAASIGY--IGVGTVEFLLDERGSFYFMEMNTRIQVE-HPVTEMISS 374 (523)
Q Consensus 302 ~~~~~~~~~~p~~~l~~~~~~~l~~~----a~~~~~alg~--~G~~~vE~~~~~~G~~~liEiNpR~~g~-~~~~~~~~G 374 (523)
.+......++|++.++++..+++.+. +.++++++|+ .|++|+||+++++|++++||+|||+|.. ...+...+|
T Consensus 228 ~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~~~~~~~~~g~~~~G~~~ve~~~~~~g~~~viEiN~R~G~~~~~~i~~~~g 307 (431)
T 3mjf_A 228 PNTGGMGAYSPAPVVTDDVHQRVMDQVIWPTVRGMAAEGNIYTGFLYAGLMISADGQPKVIEFNCRFGDPETQPIMLRMR 307 (431)
T ss_dssp EECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEECTTSCEEEEEECGGGSTTTHHHHHHHBC
T ss_pred CCCCCceEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEEEeCCCCeEEEEEecCCCCcHHHHHHHHHC
Confidence 11122344678877899999888876 6778888776 6999999999999999999999999632 233446799
Q ss_pred CCHHHHHHHHHcCCCCCCCcccccc-ceeEEEEEEeeCCCCCCCCCCCc-eEEEEecCCCCcEEE-eee--ecCC-cccC
Q 009903 375 VDLIEEQIHVAMGGKLRYKQEDIVL-QGHSIECRINAEDPFKNFRPGPG-RITAYLPAGGPFVRM-DSH--VYPD-YVVP 448 (523)
Q Consensus 375 idl~~~~~~~~~G~~~~~~~~~~~~-~~~ai~~~~~a~~~~~~~~~~~g-~v~~~~~~~~~~v~~-~~~--~~~G-~~v~ 448 (523)
+|+++.+++++.|...+.. ..+ ..+++.+.+.+..+-.. +..| .|..+.....+++.+ ... ...| ..+
T Consensus 308 ~dl~~~~~~~~~G~l~~~~---~~~~~~~a~~vv~a~~gyp~~--~~~g~~i~~~~~~~~~~~~~~~ag~~~~~~~~~~- 381 (431)
T 3mjf_A 308 SDLVELCLAGTQGKLNEKT---SDWDERPSLGVVLAAGGYPAD--YRQGDVIHGLPQQEVKDGKVFHAGTKLNGNHEVV- 381 (431)
T ss_dssp SCHHHHHHHHHTTCGGGCC---CCBCSSCEEEEEEEETTTTSC--CCCCCBCBCCCSSCBTTEEEEESSEEECTTSCEE-
T ss_pred CCHHHHHHHHHcCCCCCCC---ccccCCcEEEEEecCCCcCcc--CCCCCEeeCCccccCCCcEEEEeeeEecCCCEEE-
Confidence 9999999999999843221 122 23455544433221111 1122 222222111134432 111 1222 222
Q ss_pred CCCCcceEEEEEEcCCHHHHHHHHHHHhhcCeEeecccCHH
Q 009903 449 PSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPTTIE 489 (523)
Q Consensus 449 ~~~~~~iG~vi~~g~s~~ea~~~~~~~~~~i~i~~~~~~~~ 489 (523)
.+ +.+++.|++.|+|.++|.++++++++.|.++|.++..+
T Consensus 382 ~~-ggRv~~v~~~g~~~~~A~~~a~~~~~~i~~~~~~~r~d 421 (431)
T 3mjf_A 382 TN-GGRVLCVTALGETVAQAQQYAYQLAEGIQWEGVFCRKD 421 (431)
T ss_dssp EC-SSEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEECCSC
T ss_pred ec-CCeEEEEEEecCCHHHHHHHHHHHhccCCCCCceeehh
Confidence 22 34599999999999999999999999999999776443
No 32
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=100.00 E-value=1.6e-41 Score=355.85 Aligned_cols=385 Identities=17% Similarity=0.228 Sum_probs=282.0
Q ss_pred cEEEEEcCcHHHHHHHHHH-HHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 72 EKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 72 k~ILi~g~g~~~~~vi~aa-~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
|+|||+|+|.....++.++ +++|++++++++. ++. ...+++ .+.+ ++.|.+.+++++++.++|+|+++
T Consensus 1 m~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~-~~~--~~~~~~-~~~~-------~~~d~~~l~~~~~~~~~d~v~~~ 69 (424)
T 2yw2_A 1 MKVLVVGNGGREHAIAWKVAQSPLVKELYVAKG-NAG--IWEIAK-RVDI-------SPTDVEKLAEFAKNEGVDFTIVG 69 (424)
T ss_dssp CEEEEEESSHHHHHHHHHHTTCTTCSEEEEEEC-CTT--GGGTSE-EECS-------CTTCHHHHHHHHHHHTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHhhCCCCCEEEEECC-Ccc--hhhhcc-cccC-------CcCCHHHHHHHHHHcCCCEEEEC
Confidence 4799999995545554444 5689998888643 222 233444 3322 47789999999999999999986
Q ss_pred CCcccccH---HHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEE
Q 009903 151 YGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (523)
Q Consensus 151 ~g~~~e~~---~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvK 227 (523)
. |.. .+++.+++.|++++||++++++.+.||..++++|+++|||+|++ ..+.+.+++.+++++++||+|||
T Consensus 70 ~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~~~~PvvvK 143 (424)
T 2yw2_A 70 P----EAPLVEGIVDEFEKRGLKIFGPNKEAAKLEGSKAFAKTFMKKYGIPTARY--EVFTDFEKAKEYVEKVGAPIVVK 143 (424)
T ss_dssp S----HHHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCE--EEESCHHHHHHHHHHHCSSEEEE
T ss_pred C----chHHHHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHcCCCCCCe--EEECCHHHHHHHHHHcCCcEEEE
Confidence 4 443 46678889999999999999999999999999999999999999 78899999999999999999999
Q ss_pred eCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeece--eee--
Q 009903 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDC--SIQ-- 301 (523)
Q Consensus 228 P~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~--~~~-- 301 (523)
|..|++|+||+++++.+|+.++++.+... ..++ ...++|||||+| .|+++.++.+++ .+..+..... ...
T Consensus 144 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~g-~E~sv~~~~~G~-~~~~~~~~~~~~~~~~~ 219 (424)
T 2yw2_A 144 ADGLAAGKGAVVCETVEKAIETLDRFLNK--KIFGKSSERVVIEEFLEG-EEASYIVMINGD-RYVPLPTSQDHKRLLDE 219 (424)
T ss_dssp ESSCCTTCSEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCCS-EEEEEEEEEETT-EEEECCCBEECCEEETT
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCCC-cEEEEEEEEcCC-EEEeecceeeccccccC
Confidence 99999999999999999999999877531 1122 268999999999 999999998754 3333322110 010
Q ss_pred ---ecCceeeEecCCCCCCHHHHHHHH-HHHHHHHHHc-----CCccccEEEEEEeCCCCEEEEEEecCCCCCc-cceee
Q 009903 302 ---RRNQKLLEEAPSPALTPELRKAMG-DAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVEH-PVTEM 371 (523)
Q Consensus 302 ---~~~~~~~~~~p~~~l~~~~~~~l~-~~a~~~~~al-----g~~G~~~vE~~~~~~G~~~liEiNpR~~g~~-~~~~~ 371 (523)
.+........|++.++++..+++. +++.+++++| ++.|++|+||+++++| +||+|||||++++. ..+..
T Consensus 220 ~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~~~i~~ 298 (424)
T 2yw2_A 220 DKGPNTGGMGAYSPTPVINEEVEKRIREEIVERVIKGLKEEGIYYRGFLYAGLMITKEG-PKVLEFNVRLGDPEAQPILM 298 (424)
T ss_dssp TEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHHTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTTHHHHHH
T ss_pred CCCCCCCCCeeECCCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-cEEEEEecCCCCcHHHHHHH
Confidence 111122345677558898888884 6777777765 6779999999999999 99999999998663 34555
Q ss_pred ecCCCHHHHHHHHHcCCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCce-EEEEec-CCCCcEEEeeeecCCcccC-
Q 009903 372 ISSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGR-ITAYLP-AGGPFVRMDSHVYPDYVVP- 448 (523)
Q Consensus 372 ~~Gidl~~~~~~~~~G~~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~-v~~~~~-~~~~~v~~~~~~~~G~~v~- 448 (523)
.+|+|+.+.+++++.|. ++.. ....++++.+++.++.+.. .+..|. +..+.. ...+++++ +..|..+.
T Consensus 299 ~~g~d~~~~~~~~~~g~-l~~~---~~~~~~a~~~~~~~~g~~~--~~~~g~~i~~~~~~~~~~~~~~---~~~g~~~~~ 369 (424)
T 2yw2_A 299 RVKNDFLETLLNFYEGK-DVHI---KEDERYALDVVLASRGYPE--KPETGKIIHGLDYLKSMEDVVV---FHAGTKKEG 369 (424)
T ss_dssp TBCSCHHHHHHHHHTTC-CCCC---CBCSSEEEEEEEECTTTTS--SCCCCCBCBCHHHHHTSTTEEE---EESSEEEET
T ss_pred HhCCCHHHHHHHHHcCC-CCcc---cccCCcEEEEEEecCCCCC--CCCCCCcCcCcccccCCCCeEE---EEcceEeeC
Confidence 78999999999999997 3311 1223566777776643211 123333 332311 11244543 12344321
Q ss_pred ---CCCCcceEEEEEEcCCHHHHHHHHHHHhhcCeEeecccC
Q 009903 449 ---PSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPTT 487 (523)
Q Consensus 449 ---~~~~~~iG~vi~~g~s~~ea~~~~~~~~~~i~i~~~~~~ 487 (523)
....+++|+|+++|+|.++|+++++++++.+.++|.++.
T Consensus 370 ~~~~~~~~r~~~v~~~g~~~~~a~~~~~~~~~~i~~~g~~~r 411 (424)
T 2yw2_A 370 NFTVTSGGRVLNVCAYGKTLKEAKERAYEAIRYVCFEGMHYR 411 (424)
T ss_dssp TEEEECSSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTCBCC
T ss_pred CEEEecCCcEEEEEEEeCCHHHHHHHHHHHHhcceeCCcEEc
Confidence 112346999999999999999999999999999998764
No 33
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=100.00 E-value=3e-41 Score=352.27 Aligned_cols=374 Identities=13% Similarity=0.123 Sum_probs=273.5
Q ss_pred CccEEEEEcCcHHHHHHHHH-HHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 70 RQEKILVANRGEIAVRVIRT-AHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~a-a~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
+.++|||+|+|.....++.+ ++++| +|+++.. .+....+|+. + |.+.+++++++.++|+|+
T Consensus 14 ~~~~vlviG~Ggr~~a~a~~~a~~~g-~v~~~~~-----np~~~~~d~~--i----------d~~~l~~~~~~~~~d~V~ 75 (412)
T 1vkz_A 14 KAVRVHILGSGGREHAIGWAFAKQGY-EVHFYPG-----NAGTKRDGTN--H----------PYEGEKTLKAIPEEDIVI 75 (412)
T ss_dssp --CEEEEEECSHHHHHHHHHHHHTTC-EEEEEEC-----CTTGGGTSEE--C----------CCCTHHHHHTSCSSCEEC
T ss_pred ccCEEEEECCCHHHHHHHHHHHhCCC-CEEEECC-----Chhhhccccc--C----------CHHHHHHHHHHcCCCEEE
Confidence 35699999999766665554 57789 8888832 2345566654 2 355789999999999999
Q ss_pred eCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEe
Q 009903 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKA 228 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP 228 (523)
++. |+..++.+++.++. ++||+++++..+.||..++++|+++|||+|++ ..+.+.+++.+++++++||+||||
T Consensus 76 ~~~----E~~~~a~~~~~l~~-~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~e~~~~~~~~g~PvvvKp 148 (412)
T 1vkz_A 76 PGS----EEFLVEGVSNWRSN-VFGPVKEVARLEGSKVYAKRFMKKYGIRTARF--EVAETPEELREKIKKFSPPYVIKA 148 (412)
T ss_dssp CSS----GGGTCC-----CTT-BSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHTTSCSSEEEEE
T ss_pred ECC----cHHHHHHHHHHhhh-hhCCCHHHHHHhcCHHHHHHHHHHcCCCCCCE--EEECCHHHHHHHHHhcCCCEEEEe
Confidence 854 45445577788877 78999999999999999999999999999998 788999999999999999999999
Q ss_pred CCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCC-CcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeec-ee-e-----
Q 009903 229 TAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGN-DGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERD-CS-I----- 300 (523)
Q Consensus 229 ~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~-~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~-~~-~----- 300 (523)
..++||+||+++++.+|+.++++.+.... ..++. +.++|||||+| +|++++++.|++ .+..+...+ .. .
T Consensus 149 ~~~~gg~Gv~~v~~~~el~~a~~~~~~~~-~~~g~~~~vlvEe~i~G-~E~sv~~~~dg~-~~~~~~~~~~~~~~~~~~~ 225 (412)
T 1vkz_A 149 DGLARGKGVLILDSKEETIEKGSKLIIGE-LIKGVKGPVVIDEFLAG-NELSAMAVVNGR-NFVILPFVRDYKRLMDGDR 225 (412)
T ss_dssp SSCCSSCCEEEESSHHHHHHHHHHHHHTS-SSTTCCSCEEEEECCCS-EEEEEEEEEETT-EEEECCCCEECCEEETTTE
T ss_pred CCCCCCCCEEEECCHHHHHHHHHHHHhhc-cccCCCCeEEEEECCcC-cEEEEEEEECCC-EEEEeeeeEeeeeccCCCC
Confidence 99999999999999999999998775321 01332 48999999998 999999999754 333332111 00 0
Q ss_pred eecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHc-----CCccccEEEEEEeCCCCEEEEEEecCCCCC-ccceeeecC
Q 009903 301 QRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVE-HPVTEMISS 374 (523)
Q Consensus 301 ~~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~al-----g~~G~~~vE~~~~~~G~~~liEiNpR~~g~-~~~~~~~~G 374 (523)
..+......+.|++ ++++..+++.+++.+++++| ++.|++++||+++++| +||+|||||++++ +..+...+|
T Consensus 226 ~~~~g~~~~~~P~~-l~~~~~~~i~~~a~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~~~~~~~~g 303 (412)
T 1vkz_A 226 GPNTGGMGSWGPVE-IPSDTIKKIEELFDKTLWGVEKEGYAYRGFLYLGLMLHDGD-PYILEYNVRLGDPETEVIVTLNP 303 (412)
T ss_dssp EEECSCSEEEECCC-CCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTHHHHHHHHCH
T ss_pred CCCCCCceEEECCC-CCHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEEECCC-cEEEEEecCCCCCcceeehhhcC
Confidence 11112234567887 99999999999999999999 7889999999999999 9999999999876 333445589
Q ss_pred CCHHHHHHHHHcCCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcc-----cCC
Q 009903 375 VDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYV-----VPP 449 (523)
Q Consensus 375 idl~~~~~~~~~G~~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~-----v~~ 449 (523)
+|+.+.+++++.|...+. . ...+++ ++.+++.... .+.+..|.+..+.. ++ .+ +. .|.. +..
T Consensus 304 ~d~~~~~~~~~~g~l~~~---~-~~~~~a-~~~~l~~~~~-~~~~~~g~~i~l~~---~~-~v--~~-~g~~~~~~~~~~ 370 (412)
T 1vkz_A 304 EGFVNAVLEGYRGGKMEP---V-EPRGFA-VDVVLAARGY-PDAPEKGKEITLPE---EG-LI--FF-AGVAEKDGKLVT 370 (412)
T ss_dssp HHHHHHHHHHHHTSCCCC---C-CCCSEE-EEEEEECTTT-TTSCCCCCBCBCCS---SC-CE--EE-SSEEEETTEEEE
T ss_pred CCHHHHHHHHhcCCCccc---c-ccCCeE-EEEEEecCCC-CCCCCCCCEeeeCC---CC-cE--EE-CcccccCCeEEe
Confidence 999999999988863211 1 112344 4556554321 11233454322222 33 21 11 2332 222
Q ss_pred CCCcceEEEEEEcCCHHHHHHHHHHHhhcCeEeecccC
Q 009903 450 SYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPTT 487 (523)
Q Consensus 450 ~~~~~iG~vi~~g~s~~ea~~~~~~~~~~i~i~~~~~~ 487 (523)
. .+++|+|+++|+|+++|+++++++++.|.++|+++.
T Consensus 371 ~-~~~vg~v~~~g~~~~ea~~~~~~~~~~i~~~g~~~r 407 (412)
T 1vkz_A 371 N-GGRVLHCMGTGETKEEARRKAYELAEKVHFEGKTYR 407 (412)
T ss_dssp C-SSEEEEEEEEESSHHHHHHHHHHHHHHCBCTTCBCC
T ss_pred C-CCcEEEEEEeCCCHHHHHHHHHHHhcceeeCCCEec
Confidence 2 356999999999999999999999999999998774
No 34
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=100.00 E-value=6.6e-41 Score=353.83 Aligned_cols=390 Identities=20% Similarity=0.216 Sum_probs=274.7
Q ss_pred ccCCCccEEEEEcCcHHHHHHHHHH-HHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009903 66 KVTCRQEKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (523)
Q Consensus 66 ~~~~~~k~ILi~g~g~~~~~vi~aa-~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 144 (523)
....+.++|||+|+|.....++.++ +++|++++++++. ++. ...+++ .+.+ ++.|.+.+++++++.++
T Consensus 16 ~~~~~~~~iliiG~g~r~~a~a~~~~~~~g~~~v~~~~~-~~~--~~~~~~-~~~~-------~~~d~~~l~~~~~~~~~ 84 (451)
T 2yrx_A 16 LYFQSHMNVLVIGRGGREHAIAWKAAQSPLVGKLYVAPG-NPG--IADVAE-LVHI-------DELDIEALVQFAKQQAI 84 (451)
T ss_dssp CCCCSSEEEEEEECSHHHHHHHHHHHTCTTEEEEEEEEC-CTT--GGGTSE-ECCC-------CTTCHHHHHHHHHHTTC
T ss_pred cccCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECC-Chh--hhhhCc-eecc-------CCCCHHHHHHHHHHcCC
Confidence 3344567999999996555555554 5679998877542 222 223333 2222 46789999999999999
Q ss_pred CEEEeCCCcccccH---HHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcC
Q 009903 145 TMLHPGYGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELG 221 (523)
Q Consensus 145 d~Vi~~~g~~~e~~---~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g 221 (523)
|+|+++. |.. .+++.+++.|++++||+.++++.+.||..++++|+++|||+|++ ..+.+.+++.+++++++
T Consensus 85 d~vi~~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~~~ 158 (451)
T 2yrx_A 85 DLTIVGP----EAPLASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADH--AAFTSYEEAKAYIEQKG 158 (451)
T ss_dssp SEEEECS----HHHHHTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCCBCCE--EEESCHHHHHHHHHHHC
T ss_pred CEEEECC----chHHHHHHHHHHHHCCCCEeCccHHHHHHhhCHHHHHHHHHHcCCCCCCe--EEECCHHHHHHHHHhcC
Confidence 9999865 333 45677889999999999999999999999999999999999999 78999999999999999
Q ss_pred CcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeece-
Q 009903 222 FPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDC- 298 (523)
Q Consensus 222 ~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~- 298 (523)
||+||||..+++|+||+++++.+|+.++++.+... ..++ ...++|||||+| .|+++.++.|++ .+..+.....
T Consensus 159 ~PvVvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~G-~E~sv~~~~dG~-~~~~~~~~~~~ 234 (451)
T 2yrx_A 159 APIVIKADGLAAGKGVTVAQTVEEALAAAKAALVD--GQFGTAGSQVVIEEYLEG-EEFSFMAFVNGE-KVYPLAIAQDH 234 (451)
T ss_dssp SSEEEEECC----CCEEEESSHHHHHHHHHHHHHH--SCCBTTBCCEEEEECCCS-EEEEEEEEEETT-EEEECCCBEEC
T ss_pred CcEEEEeCCCCCCCcEEEECCHHHHHHHHHHHHhc--cccCCCCCeEEEEECCcC-cEEEEEEEEcCC-EEEEeeeEEec
Confidence 99999999999999999999999999999877542 1132 368999999999 999999998754 2333222110
Q ss_pred -eee-----ecCceeeEecCCCCCCHHHHHHH-HHHHHHHHHHc-----CCccccEEEEEEeCCCCEEEEEEecCCCCCc
Q 009903 299 -SIQ-----RRNQKLLEEAPSPALTPELRKAM-GDAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVEH 366 (523)
Q Consensus 299 -~~~-----~~~~~~~~~~p~~~l~~~~~~~l-~~~a~~~~~al-----g~~G~~~vE~~~~~~G~~~liEiNpR~~g~~ 366 (523)
... .+........|++.++++..+++ .+++.+++++| ++.|++++||+++++| ++|+|||||++++.
T Consensus 235 ~~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~ 313 (451)
T 2yrx_A 235 KRAYDGDEGPNTGGMGAYSPVPQISDEMMDAALEAILRPAAKALAAEGRPFLGVLYAGLMATANG-PKVIEFNARFGDPE 313 (451)
T ss_dssp CEEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTH
T ss_pred cccccCCCCCCCCCCeEEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-cEEEEEecCCCCcH
Confidence 010 11112234567655888888888 66777766655 5679999999999999 99999999998763
Q ss_pred -cceeeecCCCHHHHHHHHHcCCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCce-EEEEecCCCCcEEEeeeecCC
Q 009903 367 -PVTEMISSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGR-ITAYLPAGGPFVRMDSHVYPD 444 (523)
Q Consensus 367 -~~~~~~~Gidl~~~~~~~~~G~~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g~-v~~~~~~~~~~v~~~~~~~~G 444 (523)
..+...+|+|+.+.+++++.|...+.. ...++++...+.+..... .+..|. +..+.... +++.+ +. .|
T Consensus 314 ~~~i~~~~g~d~~~~~~~~~~g~~~~~~----~~~~~~~~~~l~~~g~p~--~~~~g~~i~~~~~~~-~~~~v--~~-~G 383 (451)
T 2yrx_A 314 AQVVLPRLKTDLVEAVLAVMDGKELELE----WTDEAVLGVVLAAKGYPG--AYERGAEIRGLDRIS-PDALL--FH-AG 383 (451)
T ss_dssp HHHHGGGBCSCHHHHHHHHHTTCCCCCC----BCSSEEEEEEEEETTTTS--SCCCCCEEBCGGGSC-TTSEE--EE-SS
T ss_pred HHHHHHHcCCCHHHHHHHHhcCCCCCcc----ccCCceEEEEEecCCcCC--CCCCCCcCcCccccC-CCCEE--Ee-Cc
Confidence 345567899999999999999754321 112334444443321100 012222 22221111 44432 11 23
Q ss_pred cccC----CCCCcceEEEEEEcCCHHHHHHHHHHHhhcCeEeecccC
Q 009903 445 YVVP----PSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPTT 487 (523)
Q Consensus 445 ~~v~----~~~~~~iG~vi~~g~s~~ea~~~~~~~~~~i~i~~~~~~ 487 (523)
..+. ....+++|+|++.|+|.++|.++++++++.|.++|.++.
T Consensus 384 ~~~~~~~~~~~~~rvg~v~~~g~~~~ea~~~~~~~~~~i~~~~~~~r 430 (451)
T 2yrx_A 384 TKREGGAWYTNGGRVLLLAAKGETLAKAKEKAYEQLAAIDCDGLFYR 430 (451)
T ss_dssp EEEETTEEEECSSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTEECC
T ss_pred ccccCCeEEcCCCeEEEEEEEeCCHHHHHHHHHHHhhccccCCeEec
Confidence 3321 111346999999999999999999999999999887653
No 35
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=100.00 E-value=3.1e-40 Score=345.95 Aligned_cols=383 Identities=18% Similarity=0.209 Sum_probs=275.0
Q ss_pred cEEEEEcCcHHHHHHHHHH-HHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 72 EKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 72 k~ILi~g~g~~~~~vi~aa-~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
|+|||+|+|.....++.++ +++|++++++++. ++. ...+++ .+.+ ++.|.+.+++++++.++|+|+++
T Consensus 1 m~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~-~~~--~~~~~~-~~~~-------~~~d~~~l~~~~~~~~~d~v~~~ 69 (422)
T 2xcl_A 1 MNVLIIGKGGREHTLAWKAAQSSLVENVFAAPG-NDG--MAASAQ-LVNI-------EESDHAGLVSFAKQNQVGLTIVG 69 (422)
T ss_dssp CEEEEEECSHHHHHHHHHHTTCTTCSEEEEEEC-CGG--GTTTCE-ECCC-------CTTCHHHHHHHHHHTTEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEeCC-Chh--hhhhcc-cccc-------CcCCHHHHHHHHHHcCCCEEEEC
Confidence 4799999996555656555 4579999888643 221 234444 3322 47789999999999999999986
Q ss_pred CCcccccH---HHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEE
Q 009903 151 YGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (523)
Q Consensus 151 ~g~~~e~~---~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvK 227 (523)
. |.. .+++.+++.|++++||+.++++.+.||..++++|+++|||+|++ ..+.+.+++.+++++++||+|||
T Consensus 70 ~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~~~~P~vvK 143 (422)
T 2xcl_A 70 P----EVPLIEGLVDEFEKAGLHVFGPSKAAAIIEGSKQFAKDLMKKYDIPTAEY--ETFTSFDEAKAYVQEKGAPIVIK 143 (422)
T ss_dssp S----HHHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCE--EEESCHHHHHHHHHHHCSSEEEE
T ss_pred C----cHHHHHHHHHHHHHCCCCEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCe--EEECCHHHHHHHHHhcCCCEEEE
Confidence 5 333 45677889999999999999999999999999999999999999 78899999999999999999999
Q ss_pred eCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeec--eeee--
Q 009903 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERD--CSIQ-- 301 (523)
Q Consensus 228 P~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~--~~~~-- 301 (523)
|..+++|+||+++++.+|+.++++.+... ..++ ...++|||||+| .|+++.++.+++ .+..+.... ....
T Consensus 144 p~~~~~g~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~g-~E~sv~~~~dG~-~~~~~~~~~~~~~~~~~ 219 (422)
T 2xcl_A 144 ADGLAAGKGVTVAMTEEEAIACLHDFLED--EKFGDASASVVIEEYLSG-EEFSLMAFVKGE-KVYPMVIAQDHKRAFDG 219 (422)
T ss_dssp ESSCGGGTCEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCCS-EEEEEEEEEETT-EEEECCCBEEEEEEEGG
T ss_pred eCCCCCCCcEEEECCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCcC-cEEEEEEEEcCC-EEEecceeeeeehhcCC
Confidence 99999999999999999999999876531 1122 368999999999 999999998754 333322211 0110
Q ss_pred ---ecCceeeEecCCCCCCHHHHHHHH-HHHHHHHHHc-----CCccccEEEEEEeCCCCEEEEEEecCCCCCc-cceee
Q 009903 302 ---RRNQKLLEEAPSPALTPELRKAMG-DAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVEH-PVTEM 371 (523)
Q Consensus 302 ---~~~~~~~~~~p~~~l~~~~~~~l~-~~a~~~~~al-----g~~G~~~vE~~~~~~G~~~liEiNpR~~g~~-~~~~~ 371 (523)
.+........|++.++++..+++. +++.+++++| ++.|++|+||+++++| ++|+|||||++++. ..+..
T Consensus 220 ~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~vd~~~~~~g-~~viEiN~R~g~~~~~~i~~ 298 (422)
T 2xcl_A 220 DKGPNTGGMGAYSPVPQISEETVRHAVETIVKPAAKAMVQEGRSFTGVLYAGLMLTENG-SKVIEFNARFGDPETQVVLP 298 (422)
T ss_dssp GEEEEEEEEEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTTHHHHGG
T ss_pred CCCCCCCCCeeEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeeEEEeCCC-cEEEEEecCCCCcHHHHHHH
Confidence 111122345676558888888875 4777777665 5679999999999999 99999999998764 34556
Q ss_pred ecCCCHHHHHHHHHcCCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCc-eEEEEecCCCCcEEEeeeecCCccc---
Q 009903 372 ISSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPG-RITAYLPAGGPFVRMDSHVYPDYVV--- 447 (523)
Q Consensus 372 ~~Gidl~~~~~~~~~G~~~~~~~~~~~~~~~ai~~~~~a~~~~~~~~~~~g-~v~~~~~~~~~~v~~~~~~~~G~~v--- 447 (523)
.+|+|+.+.+++++.|...+. . ...++++.+.+........ +..| .+..+.... |++++ +. .|+.+
T Consensus 299 ~~g~d~~~~~~~~~~g~l~~~---~-~~~~~~~~~~~~~~g~~~~--~~~g~~i~~~~~~~-~~~~~--~~-~g~~~~~~ 368 (422)
T 2xcl_A 299 RMESDLVQVLLDLLDDKEVDL---R-WKDTAAVSVVLASEGYPES--YAKGTPIGSLAAET-EQVVV--FH-AGTKAEGG 368 (422)
T ss_dssp GBCSCHHHHHHHHHTTCCCCC---C-BCSCEEEEEEEEETTTTSC--CCSCCBCCCCCCCS-SSEEE--EE-SSEEECSS
T ss_pred hcCCCHHHHHHHHHcCCcCcc---c-ccCCceEEEEEECCCCCCC--CCCCCcccCcccCC-CCcEE--EE-eeeEeeCC
Confidence 799999999999999864422 1 1123344444433211000 1111 111121111 45443 11 23222
Q ss_pred --CCCCCcceEEEEEEcCCHHHHHHHHHHHhhcCeEeecccC
Q 009903 448 --PPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPTT 487 (523)
Q Consensus 448 --~~~~~~~iG~vi~~g~s~~ea~~~~~~~~~~i~i~~~~~~ 487 (523)
....++ +|+|+++|+|.++|.++++++++.|.++|.++.
T Consensus 369 ~~~~~~~r-~~~v~~~g~~~~~a~~~~~~~~~~i~~~g~~~r 409 (422)
T 2xcl_A 369 EFVTNGGR-VANVTAFDETFEAARDRVYKAVDEIFKPGLFFR 409 (422)
T ss_dssp SEEECSSE-EEEEEEEESSHHHHHHHHHHHHHHHCCTTEECC
T ss_pred EEEeCCCc-eEEEEEEeCCHHHHHHHHHHHHhcceeCCcEec
Confidence 222344 999999999999999999999999999887664
No 36
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=4.2e-38 Score=332.76 Aligned_cols=377 Identities=15% Similarity=0.172 Sum_probs=285.4
Q ss_pred CCcEEEEecCCC--CCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCCCccccc--HHHHHHHHHcCC
Q 009903 94 GIPCVAVYSTID--KDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGYGFLAEN--AVFVEMCREHGI 169 (523)
Q Consensus 94 G~~vi~v~~~~~--~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~~g~~~e~--~~~a~~~~~~gl 169 (523)
.+.|.++. +.+ ...+....+|+.+.+.+.+..+++...+.+++++++.++|+|+|.. |+ ..++++++++|+
T Consensus 52 ~~~Vav~~-~~D~~~~~p~~~~Ad~~~~~~~~~~~~~~~~i~~I~~~a~~~~id~Vip~s----E~~l~~~a~~~e~~Gi 126 (474)
T 3vmm_A 52 KYSVAVIK-DKDYFKSLADFEHPDSIYWAHEDHNKPEEEVVEQIVKVAEMFGADAITTNN----ELFIAPMAKACERLGL 126 (474)
T ss_dssp HHEEEEEE-CGGGCSSGGGGCCCSCCSSCCSCCCCCHHHHHHHHHHHHHHTTCSEEEESC----GGGHHHHHHHHHHTTC
T ss_pred ceEEEEEe-CCCcccCCcchhhcCeEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEECC----cccHHHHHHHHHHcCC
Confidence 34444443 333 3445678899998775444444556778999999999999999954 44 678899999999
Q ss_pred ceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHH
Q 009903 170 NFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKL 249 (523)
Q Consensus 170 ~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~ 249 (523)
+ |++++++..+.||..++++|+++|+|+|++ ..+.+.+++.++++++|||+||||..|+||+|+.++++.+|+.++
T Consensus 127 ~--g~~~~ai~~~~DK~~~k~~l~~~GIpvp~~--~~v~s~ee~~~~~~~lg~PvVVKP~~g~gg~Gv~iv~~~eel~~a 202 (474)
T 3vmm_A 127 R--GAGVQAAENARDKNKMRDAFNKAGVKSIKN--KRVTTLEDFRAALEEIGTPLILKPTYLASSIGVTLITDTETAEDE 202 (474)
T ss_dssp C--CSCHHHHHHTTCHHHHHHHHHHTTSCCCCE--EEECSHHHHHHHHHHSCSSEEEEESSCCTTTTCEEECCTTSHHHH
T ss_pred C--CCCHHHHHHhhCHHHHHHHHHHcCCCCCCe--EEECCHHHHHHHHHHcCCCEEEEECCCCcCceEEEECCHHHHHHH
Confidence 7 899999999999999999999999999999 789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-------hcCCCcEEEeeccCCCc-----------EEEEEEEE-eCCCcEEEEeeeceeeeecCceeeEe
Q 009903 250 LQQAKSEAAA-------AFGNDGVYLEKYVQNPR-----------HIEFQVLA-DKYGNVVHFGERDCSIQRRNQKLLEE 310 (523)
Q Consensus 250 ~~~~~~~~~~-------~~~~~~~lvEefI~G~~-----------e~sv~v~~-d~~g~v~~~~~~~~~~~~~~~~~~~~ 310 (523)
++.+...... .+ ++.+||||||+|.+ +++++++. ++++..+.+.++.+... +......
T Consensus 203 ~~~~~~~~~~~~~~~a~~~-~~~vlVEe~I~G~e~~~~q~~~~~~e~sv~~v~~dg~~~~v~i~~~~~~~~--~~~~~~~ 279 (474)
T 3vmm_A 203 FNRVNDYLKSINVPKAVTF-EAPFIAEEFLQGEYGDWYQTEGYSDYISIEGIMADGEYFPIAIHDKTPQIG--FTETSHI 279 (474)
T ss_dssp HHHHHHHHTTSCCCTTCCC-SCSEEEEECCCBCHHHHCSSSSSCSEEEEEEEEETTEEEEEEEEEECCCBT--TBCCEEE
T ss_pred HHHHHHHHhhccccccccC-CCeEEEEeCCCCceeeeeecccccceeEEEEEEECCeEEEEEEEeeccCCC--ccceEEE
Confidence 9987665322 12 37899999999944 28888554 44434455555544332 4556667
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCcccc-EEEEEEeCCCCEEEEEEecCCCCC--ccceeeecCCCHHHHHHHHHc-
Q 009903 311 APSPALTPELRKAMGDAAVAAAASIGYIGVG-TVEFLLDERGSFYFMEMNTRIQVE--HPVTEMISSVDLIEEQIHVAM- 386 (523)
Q Consensus 311 ~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~-~vE~~~~~~G~~~liEiNpR~~g~--~~~~~~~~Gidl~~~~~~~~~- 386 (523)
.|++ ++++..++|.+.+.++++++|+.|.+ |+||+++++|++++||||||++|+ +++++.++|+|++++++++++
T Consensus 280 ~Pa~-l~~~~~~~l~~~a~~~~~alG~~g~~~~vef~~~~dg~~~~iEvNpR~~G~~~~~~~~~~tG~dl~~~~i~~a~~ 358 (474)
T 3vmm_A 280 TPSI-LDEEAKKKIVEAAKKANEGLGLQNCATHTEIKLMKNREPGLIESAARFAGWNMIPNIKKVFGLDMAQLLLDVLCF 358 (474)
T ss_dssp ESCC-CCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEEGGGEEEEEEEESSCCSTTHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred ECCC-CCHHHHHHHHHHHHHHHHHcCCCCccEEEEEEEcCCCCEEEEEEeCCCCCCchHHHHHHHHCcCHHHHHHHHHcC
Confidence 8885 99999999999999999999999776 799999988999999999999876 678889999999999999999
Q ss_pred CCCCCCCccccc-cceeEEEEEEeeCCCC--CCCCCCCc--eEEEEecCC----CCcEEEee-eecCCccc----CCCCC
Q 009903 387 GGKLRYKQEDIV-LQGHSIECRINAEDPF--KNFRPGPG--RITAYLPAG----GPFVRMDS-HVYPDYVV----PPSYD 452 (523)
Q Consensus 387 G~~~~~~~~~~~-~~~~ai~~~~~a~~~~--~~~~~~~g--~v~~~~~~~----~~~v~~~~-~~~~G~~v----~~~~~ 452 (523)
|.+++..+..+. ..+.+..+.+++..+. ..+.+... .+..+..|. +....+.. ....|..| ..-||
T Consensus 359 G~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (474)
T 3vmm_A 359 GKDADLPDGLLDQEPYYVADCHLYPQHFKQNGQIPETAEDLVIEAIDIPDGLLKGDTEIVSFSAAAPGTSVDLTLFEAFN 438 (474)
T ss_dssp GGGSCCCSSCCCCCSSEEEEEEECHHHHHHTTSSCTTCEEEEEEEEECCTTCCCTTCEEEEEEECCTTEEECTTSCGGGC
T ss_pred CCCCCCCcccccCCCceeEEEEEeccccccccccCCcccceeecceecccceecccceEeeccCCCCCceEEEEeehhcc
Confidence 999887765554 3455666777665432 12222222 234443331 11222221 22223222 22357
Q ss_pred cceEEEEEEcCCHHHHHHHHHHHhhcCeEeec
Q 009903 453 SLLGKLIVWAPTREKAIERMKRALNDTIITGV 484 (523)
Q Consensus 453 ~~iG~vi~~g~s~~ea~~~~~~~~~~i~i~~~ 484 (523)
+.+ .+...|+++++..+.+.++++..+++.-
T Consensus 439 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (474)
T 3vmm_A 439 SIA-AFELKGSNSQDVAESIRQIQQHAKLTAK 469 (474)
T ss_dssp CCE-EEEEEESCHHHHHHHHHHHHHHCEEEEE
T ss_pred Cce-eEEeccccHHHHHHHHHHHHHhhhhhhe
Confidence 755 4555999999999999999998887653
No 37
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=100.00 E-value=4.6e-38 Score=362.18 Aligned_cols=364 Identities=19% Similarity=0.251 Sum_probs=272.2
Q ss_pred CccEEEEEcCcHH-----------HHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHH
Q 009903 70 RQEKILVANRGEI-----------AVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSA 138 (523)
Q Consensus 70 ~~k~ILi~g~g~~-----------~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~ 138 (523)
++++|||+|+|.. +.+++++|+++|+++++++++++........+|+.+ ++ ..+.+.++++
T Consensus 558 ~~~kVlVlG~G~~riG~~~Efd~~~~~~~~al~~~G~~vi~v~~np~~~s~~~~~ad~~~-~~-------p~~~e~v~~i 629 (1073)
T 1a9x_A 558 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLY-FE-------PVTLEDVLEI 629 (1073)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEE-CC-------CCSHHHHHHH
T ss_pred cCcEEEEecCCccccccccccchhHHHHHHHHHhcCCEEEEEecCCcccccccccccEEE-ec-------cchhhhhhhh
Confidence 5689999999874 457899999999999999877766655666788776 32 4678999999
Q ss_pred HHHcCCCEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHH
Q 009903 139 AISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLAD 218 (523)
Q Consensus 139 ~~~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~ 218 (523)
++..++|+|++.++... ...+++.+++.|++++|++++++..+.||..++++|+++|||+|++ ..+.+.+++.++++
T Consensus 630 ~~~e~~d~Vi~~~g~~~-~~~la~~Le~~Gi~i~G~~~~ai~~~~DK~~~~~ll~~~GIp~P~~--~~~~s~eea~~~~~ 706 (1073)
T 1a9x_A 630 VRIEKPKGVIVQYGGQT-PLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPAN--ATVTAIEMAVEKAK 706 (1073)
T ss_dssp HHHHCCSEEECSSSTHH-HHTTHHHHHHTTCCBCSSCHHHHHHHHSHHHHHHHHHHHTCCCCCE--EECCSHHHHHHHHH
T ss_pred hhhcCcceEEeecCCch-HHHHHHHHHHCCCCeeCCCHHHHHHhhCHHHHHHHHHHcCcCCCCc--eEECCHHHHHHHHH
Confidence 99999999998765321 1355788899999999999999999999999999999999999999 78999999999999
Q ss_pred hcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeece
Q 009903 219 ELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDC 298 (523)
Q Consensus 219 ~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~ 298 (523)
++|||+||||..+.||+||.++++.+|+.++++.+.... +..+++||+||+|.+|++++++.|+. .++..+..+.
T Consensus 707 ~ig~PvvVKP~~~~gG~Gv~iv~~~~el~~~~~~a~~~~----~~~~vlvEefI~g~~E~~V~~l~d~~-~v~~~~i~e~ 781 (1073)
T 1a9x_A 707 EIGYPLVVRASYVLGGRAMEIVYDEADLRRYFQTAVSVS----NDAPVLLDHFLDDAVEVDVDAICDGE-MVLIGGIMEH 781 (1073)
T ss_dssp HHCSSEEEEC-------CEEEECSHHHHHHHHHHCC------------EEEBCCTTCEEEEEEEEECSS-CEEEEEEEEE
T ss_pred HcCCCEEEEECCCCCCCCeEEECCHHHHHHHHHHHHhhC----CCCcEEEEEccCCCcEEEEEEEEECC-eEEEEeeEEE
Confidence 999999999999999999999999999999998754321 24689999999994499999999865 4444333221
Q ss_pred eee--ecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCC
Q 009903 299 SIQ--RRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVD 376 (523)
Q Consensus 299 ~~~--~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gid 376 (523)
... .+........|+..++++..+++.+++.+++++||+.|++++||+++ +|++||||||||++++.++++.++|+|
T Consensus 782 ~~~~g~~~gd~~~~~P~~~l~~~~~~~i~~~a~~i~~aLg~~G~~~vdf~v~-~~~~~viEvNpR~~~~~~~~~~~tGi~ 860 (1073)
T 1a9x_A 782 IEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVK-NNEVYLIEVNPRAARTVPFVSKATGVP 860 (1073)
T ss_dssp SSCTTSCGGGCCEEESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC-SSCEEEEEEECSCCTTHHHHHHHHSCC
T ss_pred EeccCCccCCceEEecCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEE-CCeEEEEEEECCCccHHHHHHHHHCcC
Confidence 100 11122334457656999999999999999999999999999999997 456999999999998888888899999
Q ss_pred HHHHHHHHHcCCCCCCCc--cccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCcEEEeeeecCCcc-cCCCCCc
Q 009903 377 LIEEQIHVAMGGKLRYKQ--EDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYV-VPPSYDS 453 (523)
Q Consensus 377 l~~~~~~~~~G~~~~~~~--~~~~~~~~ai~~~~~a~~~~~~~~~~~g~v~~~~~~~~~~v~~~~~~~~G~~-v~~~~~~ 453 (523)
+++.++++++|.+++... ......++++.+++++.....+ -+. +.+...+
T Consensus 861 l~~~~~~~~~G~~l~~~~~~~~~~~~~~~vk~~~~~f~~~~~---------------------------~d~~lg~~~~s 913 (1073)
T 1a9x_A 861 LAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPG---------------------------VDPLLGPEMRS 913 (1073)
T ss_dssp HHHHHHHHHTTCCHHHHTCCSCCCCSSEEEEEEECGGGGCTT---------------------------SCCCCCSSCCC
T ss_pred HHHHHHHHHcCCCchhcccCcCcCCCeEEEEeccCCcccCCC---------------------------CcCCCCCcccc
Confidence 999999999999863211 1111134555544432111100 011 1112223
Q ss_pred ceEEEEEEcCCHHHHHHHHHHHhhc
Q 009903 454 LLGKLIVWAPTREKAIERMKRALND 478 (523)
Q Consensus 454 ~iG~vi~~g~s~~ea~~~~~~~~~~ 478 (523)
.|.+++.|.|.++|..++..+...
T Consensus 914 -tGev~g~~~~~~~a~~ka~~~~~~ 937 (1073)
T 1a9x_A 914 -TGEVMGVGRTFAEAFAKAQLGSNS 937 (1073)
T ss_dssp -CEEEEEEESSHHHHHHHHHHHTTC
T ss_pred -cCceEEecCCHHHHHHhhHHhccC
Confidence 788888888888888888877653
No 38
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=100.00 E-value=1.2e-36 Score=308.15 Aligned_cols=293 Identities=15% Similarity=0.145 Sum_probs=209.9
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHc-C-CcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEM-G-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~-G-~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
|+++|||+|+|.. ..+++++++. | ++|++++.+ +..+...++|+++.++ ..++..+.+.+++++++.++|+|
T Consensus 3 ~~~~Ili~g~g~~-~~l~~~l~~~~~~~~v~~~d~~--~~~~~~~~~d~~~~~~---~~~~~~~~~~l~~~~~~~~~d~v 76 (331)
T 2pn1_A 3 QKPHLLITSAGRR-AKLVEYFVKEFKTGRVSTADCS--PLASALYMADQHYIVP---KIDEVEYIDHLLTLCQDEGVTAL 76 (331)
T ss_dssp TCCEEEEESCTTC-HHHHHHHHHHCCSSEEEEEESC--TTCGGGGGSSSEEECC---CTTSTTHHHHHHHHHHHHTCCEE
T ss_pred ccceEEEecCCch-HHHHHHHHHhcCCCEEEEEeCC--CcchhHHhhhceecCC---CCCChhHHHHHHHHHHHcCCCEE
Confidence 4579999999865 5688888887 7 899998554 4455667888887653 12233458899999999999999
Q ss_pred EeCCCcccc-cHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHH--HhcCCcE
Q 009903 148 HPGYGFLAE-NAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLA--DELGFPV 224 (523)
Q Consensus 148 i~~~g~~~e-~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~--~~~g~P~ 224 (523)
+++.+.... ....++.++..|++++|++++++..+.||..++++|+++|||+|++ .. +.+++.+++ ++++||+
T Consensus 77 i~~~~~~~~~~a~~~~~l~~~g~~~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~--~~~~~~~~~~~~~~~~P~ 152 (331)
T 2pn1_A 77 LTLIDPELGLLAQATERFQAIGVTVIVSPYAACELCFDKYTMYEYCLRQGIAHART--YA--TMASFEEALAAGEVQLPV 152 (331)
T ss_dssp EESSHHHHHHHHHTHHHHHTTTCEECCCCHHHHHHHHBHHHHHHHHHHHTCCCCCE--ES--SHHHHHHHHHTTSSCSCE
T ss_pred EeCCchhHHHHHHHHHHHHhCCcEEecCCHHHHHHhhCHHHHHHHHHHcCCCCCcE--Ee--cHHHhhhhhhcccCCCCE
Confidence 997653211 1233566777799999999999999999999999999999999998 33 566777766 4789999
Q ss_pred EEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEe-CCCcEEEEeeeceeeeec
Q 009903 225 MIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLAD-KYGNVVHFGERDCSIQRR 303 (523)
Q Consensus 225 VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d-~~g~v~~~~~~~~~~~~~ 303 (523)
|+||..|+||+||+++++.+|+.++++. ...+++||||+| .|+++.++.+ .+|+++.+..+.......
T Consensus 153 vvKp~~g~g~~gv~~v~~~~el~~~~~~----------~~~~lvee~i~G-~e~~v~~~~d~~~G~~~~~~~~~~~~~~~ 221 (331)
T 2pn1_A 153 FVKPRNGSASIEVRRVETVEEVEQLFSK----------NTDLIVQELLVG-QELGVDAYVDLISGKVTSIFIKEKLTMRA 221 (331)
T ss_dssp EEEESBC---------------------------------CEEEEECCCS-EEEEEEEEECTTTCCEEEEEEEEEEEEET
T ss_pred EEEeCCCCCCCCeEEeCCHHHHHHHHHh----------CCCeEEEecCCC-cEEEEEEEEecCCCeEEEEEEEEEEEecC
Confidence 9999999999999999999999887754 268999999999 9999999998 678877665443322222
Q ss_pred CceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHH
Q 009903 304 NQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIH 383 (523)
Q Consensus 304 ~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~ 383 (523)
. ... ..++. . .+++.+.+.+++++||+.|++++||+.+ +|+++++|||||++|+..+ ..++|+|+++++++
T Consensus 222 g-~~~-~~~~~-~----~~~~~~~~~~~~~~lg~~G~~~vd~~~~-~g~~~~iEiN~R~~g~~~~-~~~~G~~~~~~~~~ 292 (331)
T 2pn1_A 222 G-ETD-KSRSV-L----RDDVFELVEHVLDGSGLVGPLDFDLFDV-AGTLYLSEINPRFGGGYPH-AYECGVNFPAQLYR 292 (331)
T ss_dssp T-EEE-EEEEE-C----CHHHHHHHHHHHTTTCCCEEEEEEEEEE-TTEEEEEEEESSCCTTHHH-HHHTTCCHHHHHHH
T ss_pred C-cee-EeEEe-c----cHHHHHHHHHHHHHhCCcceEEEEEEEc-CCCEEEEEEeCCCCCchHH-HHHcCCCHHHHHHH
Confidence 1 111 11111 2 2567889999999999999999999964 5669999999999887654 66799999999999
Q ss_pred HHcCCCCCC
Q 009903 384 VAMGGKLRY 392 (523)
Q Consensus 384 ~~~G~~~~~ 392 (523)
.++|.+++.
T Consensus 293 ~~~g~~~~~ 301 (331)
T 2pn1_A 293 NLMHEINVP 301 (331)
T ss_dssp HHTTCCCCC
T ss_pred HHcCCCCCc
Confidence 999998754
No 39
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=100.00 E-value=3e-36 Score=308.39 Aligned_cols=301 Identities=17% Similarity=0.180 Sum_probs=220.2
Q ss_pred ccEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCcc-----------ccccCee----EEcCCCCCC
Q 009903 71 QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALH-----------VKLADES----VCIGEAPSS 126 (523)
Q Consensus 71 ~k~ILi~g~g~---------~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-----------~~~ad~~----~~~~~~~~~ 126 (523)
+|||.|+-+|. +|..+++++++.||+|+.++.+.+..... ....|.. ..+. ...
T Consensus 3 kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 80 (357)
T 4fu0_A 3 NKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGITRSGEWYHYTGEKEKILNNTWFEDSKNLCPVVVS--QNR 80 (357)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTCCEEEECSCTHHHHTTCGGGCGGGEEEEEEC--CCT
T ss_pred CCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEEeCCCceeecCCCHHHhhcCcchhhhhcccccccc--ccc
Confidence 46787874442 47789999999999999996554421111 0111111 1111 000
Q ss_pred CCCCCHHHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCc
Q 009903 127 QSYLLIPNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDG 205 (523)
Q Consensus 127 ~~~~~~~~l~~~~~~~~id~Vi~~-~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~ 205 (523)
......+......+..++|+|++. +|...|+..++.+++.+|+|++|+++.++..+.||..++++|+++|||+|++ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~D~vf~~l~G~~gEdg~~q~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~--~ 158 (357)
T 4fu0_A 81 SVKGFLEIASDKYRIIKVDLVFPVLHGKNGEDGTLQGIFELAGIPVVGCDTLSSALCMDKDRAHKLVSLAGISVPKS--V 158 (357)
T ss_dssp TTCEEEEC----CEEEECSEEEECCCSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCBCCCE--E
T ss_pred cccchhhhhhhhHhhcCCCEEEECCcCccccCHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHCCCCCCCE--E
Confidence 000001122333445679999998 7888899999999999999999999999999999999999999999999998 4
Q ss_pred cCCC---HHHHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEE
Q 009903 206 LLQS---TEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQV 282 (523)
Q Consensus 206 ~~~s---~~e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v 282 (523)
.+.+ ..++.++.+++|||+||||..|++|.|+.+|++.+||.++++.+... +..+++|+||+| +|+++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~lg~PvvVKP~~gg~s~Gv~~v~~~~el~~~~~~a~~~------~~~vlvE~~i~G-~e~~v~v 231 (357)
T 4fu0_A 159 TFKRFNEEAAMKEIEANLTYPLFIKPVRAGSSFGITKVIEKQELDAAIELAFEH------DTEVIVEETING-FEVGCAV 231 (357)
T ss_dssp EEEGGGHHHHHHHHHHHCCSSEEEEETTCSSSTTCEEESSHHHHHHHHHHHTTT------CSEEEEEECCCS-EEEEEEE
T ss_pred eecCCChHHHHHHHHHhcCCCEEEEECCCCCCCceEEeccHHhHHHHHHHHhcc------CCeEEEEEecCC-EEEEEEE
Confidence 4433 34456777899999999999999999999999999999998876542 478999999999 9999999
Q ss_pred EEeCCCcEEEEeeec--eeeeecC-----ceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEE
Q 009903 283 LADKYGNVVHFGERD--CSIQRRN-----QKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYF 355 (523)
Q Consensus 283 ~~d~~g~v~~~~~~~--~~~~~~~-----~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~l 355 (523)
+.++...+..+.... ..+.+.. .......|+. ++++..+++.+++.+++++||+.|+++|||+++++|++||
T Consensus 232 l~~~~~~~~~v~~~~~~~~~~d~~~k~~~~~~~~~~pa~-l~~~~~~~i~~~A~~~~~aLg~~G~~~VDf~~~~dg~~~v 310 (357)
T 4fu0_A 232 LGIDELIVGRVDEIELSSGFFDYTEKYTLKSSKIYMPAR-IDAEAEKRIQEAAVTIYKALGCSGFSRVDMFYTPSGEIVF 310 (357)
T ss_dssp EESSSEEECCCEEEEECHHHHTSCSBCSSCCEEEESSCS-CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEE
T ss_pred EecCCceEEEEEEEEcccccccccccccCCCceEecCCC-CCHHHHHHHHHHHHHHHHHhCCcceEEEEEEEeCCCCEEE
Confidence 987653332222211 1111111 1122344655 9999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCc----cceeeecCCCHHHHHHH
Q 009903 356 MEMNTRIQVEH----PVTEMISSVDLIEEQIH 383 (523)
Q Consensus 356 iEiNpR~~g~~----~~~~~~~Gidl~~~~~~ 383 (523)
+|||||||.+. +....++|+++.+++-+
T Consensus 311 lEvNt~PG~t~~S~~p~~~~~~G~~~~~li~~ 342 (357)
T 4fu0_A 311 NEVNTIPGFTSHSRYPNMMKGIGLSFSQMLDK 342 (357)
T ss_dssp EEEESSCCCSTTCHHHHHHHTTTCCHHHHHHH
T ss_pred EEEeCCCCCCcccHHHHHHHHhCcCHHHHHHH
Confidence 99999997652 33445689988765444
No 40
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=100.00 E-value=1.1e-35 Score=299.58 Aligned_cols=277 Identities=21% Similarity=0.223 Sum_probs=216.7
Q ss_pred CCccEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHH
Q 009903 69 CRQEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAA 139 (523)
Q Consensus 69 ~~~k~ILi~g~g~---------~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~ 139 (523)
.|+++|+|+.+|. ++..+++++++.|++|+.++.... .+ ...
T Consensus 11 ~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~~-------------~~----------------~~l 61 (317)
T 4eg0_A 11 KRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAER-------------PL----------------SAL 61 (317)
T ss_dssp GGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTS-------------CT----------------THH
T ss_pred hhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCCc-------------hH----------------HHh
Confidence 3678899997764 578999999999999999952211 00 011
Q ss_pred HHcCCCEEEeC-CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHH-
Q 009903 140 ISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLA- 217 (523)
Q Consensus 140 ~~~~id~Vi~~-~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~- 217 (523)
+..++|.|++. ++...|+..++.+++.+|++++|++++++..+.||..++++|+++|||+|++ ..+.+.+++.+++
T Consensus 62 ~~~~~D~v~~~~hg~~ge~~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~~ 139 (317)
T 4eg0_A 62 KDEGFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQTGVPTPPF--ETVMRGDDYAARAT 139 (317)
T ss_dssp HHTTCCEEEECCCSGGGTSSHHHHHHHHHTCEESSCCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEEETTSCHHHHHH
T ss_pred hhcCCCEEEEcCCCCCCchHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCE--EEEECchhHHHHHH
Confidence 34679999987 5556678888999999999999999999999999999999999999999999 6777777776666
Q ss_pred ---HhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccC-CCcEEEEEEEEeCCCcEEEE
Q 009903 218 ---DELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQ-NPRHIEFQVLADKYGNVVHF 293 (523)
Q Consensus 218 ---~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~-G~~e~sv~v~~d~~g~v~~~ 293 (523)
++++||+||||..+++|.||.++++.+|+.++++.+.. .+..+||||||+ | +|+++.++.+..+.++.+
T Consensus 140 ~~~~~~g~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~i~~G-~E~~v~vl~~~~~~~~~i 212 (317)
T 4eg0_A 140 DIVAKLGLPLFVKPASEGSSVAVLKVKTADALPAALSEAAT------HDKIVIVEKSIEGG-GEYTACIAGDLDLPLIKI 212 (317)
T ss_dssp HHHHHHCSCEEEEECC-----CCEEECSGGGHHHHHHHHTT------TCSEEEEEECCCSS-EEEEEEEETTCCCCCEEE
T ss_pred HHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------CCCeEEEEcCCCCC-cEEEEEEECCcccceEEE
Confidence 88999999999999999999999999999999987542 247899999999 8 999999997765555554
Q ss_pred eeeceeeeecC-----ceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCC---
Q 009903 294 GERDCSIQRRN-----QKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVE--- 365 (523)
Q Consensus 294 ~~~~~~~~~~~-----~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~--- 365 (523)
..... +.... ......+|+. ++++..+++.+.+.+++++||+.|++++||+++++|++||+|||||+|.+
T Consensus 213 ~~~~~-~~~~~~k~~~g~~~~~~P~~-l~~~~~~~l~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~vlEiN~~pg~t~~s 290 (317)
T 4eg0_A 213 VPAGE-FYDYHAKYVANDTQYLIPCG-LPAEQETELKRIARRAFDVLGCTDWGRADFMLDAAGNAYFLEVNTAPGMTDHS 290 (317)
T ss_dssp EC----------------CEEESSCS-SCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEECTTCCEEEEEEESSCCCSTTS
T ss_pred eeCCc-eechhhcccCCCeeEEcCCC-CCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEeCCCCEEEEEeeCCCCCCccc
Confidence 32211 11111 1223456775 99999999999999999999999999999999988999999999999754
Q ss_pred -ccceeeecCCCHHHHHHHHH
Q 009903 366 -HPVTEMISSVDLIEEQIHVA 385 (523)
Q Consensus 366 -~~~~~~~~Gidl~~~~~~~~ 385 (523)
.+......|+|+.+++.++.
T Consensus 291 ~~p~~~~~~G~~~~~l~~~li 311 (317)
T 4eg0_A 291 LPPKAARSIGIGYSELVVKVL 311 (317)
T ss_dssp HHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHH
Confidence 23334568999998877764
No 41
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=100.00 E-value=3e-34 Score=295.60 Aligned_cols=302 Identities=18% Similarity=0.205 Sum_probs=224.6
Q ss_pred ccEEEEEcCcH---------HHHHHHHHH-HHcCCcEEEEecCCCCCCccc-------------ccc-CeeEEcCCCCCC
Q 009903 71 QEKILVANRGE---------IAVRVIRTA-HEMGIPCVAVYSTIDKDALHV-------------KLA-DESVCIGEAPSS 126 (523)
Q Consensus 71 ~k~ILi~g~g~---------~~~~vi~aa-~~~G~~vi~v~~~~~~~~~~~-------------~~a-d~~~~~~~~~~~ 126 (523)
+++|+|+.+|. ++..+++++ ++.||+++.++.+.+...... .+. +....+. .
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 78 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIAQNGFFLDTESSKKILALEDEQPIVDAFMKTVD----A 78 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEECTTSCBCCHHHHHHHHTTCCHHHHHHHHHTSCC----T
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEcCCCCEEecccccccccccchhhhccccccccc----c
Confidence 46899988772 378899999 999999999976544321100 010 0000000 0
Q ss_pred CCCCCHHHHHHHHHHcCCCEEEeCC-CcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCc
Q 009903 127 QSYLLIPNVLSAAISRGCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDG 205 (523)
Q Consensus 127 ~~~~~~~~l~~~~~~~~id~Vi~~~-g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~ 205 (523)
..+.....+.. +..++|+|+|.. |...|+..++.+++.+|+|++|++.+++..+.||..++++|+++|||+|++ .
T Consensus 79 ~~~~~~~~~~~--~~~~~D~v~~~~~g~~gedg~~~~lle~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~--~ 154 (377)
T 1ehi_A 79 SDPLARIHALK--SAGDFDIFFPVVHGNLGEDGTLQGLFKLLDKPYVGAPLRGHAVSFDKALTKELLTVNGIRNTKY--I 154 (377)
T ss_dssp TCTTCTTGGGG--TTCCCSEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHTTTCCCCCE--E
T ss_pred ccccCcchhhc--cccCCCEEEEecCCCCCcCHHHHHHHHHcCCCEeCcCHHHHHHHcCHHHHHHHHHHcCCCCCCE--E
Confidence 00000001111 135799999984 666677788899999999999999999999999999999999999999999 6
Q ss_pred cCCCHHH----HHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEE
Q 009903 206 LLQSTEE----AVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQ 281 (523)
Q Consensus 206 ~~~s~~e----~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~ 281 (523)
.+.+.++ +.++.++++||+||||..+++|.||.+|++.+|+.++++.+... +..+|||+||+|.+|+++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~g~PvvVKP~~~~~s~Gv~~v~~~~el~~a~~~~~~~------~~~vlvEe~I~G~~E~~v~ 228 (377)
T 1ehi_A 155 VVDPESANNWSWDKIVAELGNIVFVKAANQGSSVGISRVTNAEEYTEALSDSFQY------DYKVLIEEAVNGARELEVG 228 (377)
T ss_dssp EECTTGGGGCCHHHHHHHHCSCEEEEESSCCTTTTEEEECSHHHHHHHHHHHTTT------CSCEEEEECCCCSCEEEEE
T ss_pred EEeccccchHHHHHHHHhcCCCEEEEeCCCCCCcCEEEeCCHHHHHHHHHHHHhc------CCcEEEEcCCCCCceEEEE
Confidence 6666554 66677889999999999999999999999999999999875432 4689999999997899999
Q ss_pred EEEeCCCcEEEEeeece-------eeeecC-----c-eeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEe
Q 009903 282 VLADKYGNVVHFGERDC-------SIQRRN-----Q-KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLD 348 (523)
Q Consensus 282 v~~d~~g~v~~~~~~~~-------~~~~~~-----~-~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~ 348 (523)
++.+++..++..++... .+.... . .....+|+. ++++..+++.+++.+++++||+.|++++||+++
T Consensus 229 vl~~~~~~~~~~~ei~~~~~~~~~~~~d~~~k~~~g~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~ 307 (377)
T 1ehi_A 229 VIGNDQPLVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVHFQIPAQ-LSPEVTKEVKQMALDAYKVLNLRGEARMDFLLD 307 (377)
T ss_dssp EEESSSCEEEEEEEEECTTSSSSSCCCCHHHHTTCCTTCEEESSCC-CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC
T ss_pred EEcCCCcEEEeeEEEEecCCCCcCceeCHHhcccCCCCeeEEeCCC-CCHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEe
Confidence 99876555555544332 011110 1 223456776 999999999999999999999999999999999
Q ss_pred CCCCEEEEEEecCCCCCc----cceeeecCCCHHHH---HHHHHcC
Q 009903 349 ERGSFYFMEMNTRIQVEH----PVTEMISSVDLIEE---QIHVAMG 387 (523)
Q Consensus 349 ~~G~~~liEiNpR~~g~~----~~~~~~~Gidl~~~---~~~~~~G 387 (523)
++|++||+|||||+|++. +....++|+|+.++ +++.+++
T Consensus 308 ~~g~~~vlEiN~rpg~t~~s~~p~~~~a~G~~~~~l~~~li~~al~ 353 (377)
T 1ehi_A 308 ENNVPYLGEPNTLPGFTNMSLFKRLWDYSDINNAKLVDMLIDYGFE 353 (377)
T ss_dssp TTCCEEEEEEESSCCCSTTCGGGTGGGGGTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCCCCcccHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 888899999999998652 33334799999554 5555554
No 42
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=100.00 E-value=2e-34 Score=288.48 Aligned_cols=273 Identities=20% Similarity=0.284 Sum_probs=215.0
Q ss_pred CccEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHH
Q 009903 70 RQEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAI 140 (523)
Q Consensus 70 ~~k~ILi~g~g~---------~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~ 140 (523)
|+++|+|+++|. ++..++++++++|+++++++.+ + ..... + .
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~-~--~~~~~-------~-------------------~ 51 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK-E--VDVTQ-------L-------------------K 51 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT-T--SCGGG-------T-------------------T
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC-c--hHHHH-------h-------------------h
Confidence 568999999886 6789999999999999999644 1 11100 0 1
Q ss_pred HcCCCEEEeCC-CcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHH----
Q 009903 141 SRGCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVK---- 215 (523)
Q Consensus 141 ~~~id~Vi~~~-g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~---- 215 (523)
..++|+|++.. +...|+..+..+++.+|++++|++++++..+.||..++++|+++|+|+|++ ..+.+. ++.+
T Consensus 52 ~~~~d~v~~~~~~~~~e~~~~~~~~e~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gi~~p~~--~~~~~~-~~~~~~~~ 128 (306)
T 1iow_A 52 SMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPW--VALTRA-EFEKGLSD 128 (306)
T ss_dssp TTTEEEEEECCCSTTTSSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCE--EEEEHH-HHHHCCCT
T ss_pred ccCCCEEEEcCCCCCCcchHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCe--EEEchh-hhhccchh
Confidence 24578888763 333356567788999999999999999999999999999999999999999 667766 6666
Q ss_pred ----HHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEE
Q 009903 216 ----LADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVV 291 (523)
Q Consensus 216 ----~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~ 291 (523)
++++++||+|+||..|++|+||+++++.+++.++++.+... +..+++||||+| +|+++.++ + |+++
T Consensus 129 ~~~~~~~~~~~p~vvKP~~g~~~~gv~~v~~~~el~~~~~~~~~~------~~~~lvee~i~g-~e~~v~~~-~--g~~~ 198 (306)
T 1iow_A 129 KQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQH------DEEVLIEKWLSG-PEFTVAIL-G--EEIL 198 (306)
T ss_dssp HHHHHHHTTCSSEEEEETTCCTTTTCEEESSGGGHHHHHHHHTTT------CSEEEEEECCCC-CEEEEEEE-T--TEEC
T ss_pred hhhhHHhccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhh------CCCEEEEeCcCC-EEEEEEEE-C--CCcc
Confidence 77889999999999999999999999999999988765321 478999999999 99999998 3 3443
Q ss_pred EEeeecee--eee----c-CceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCC
Q 009903 292 HFGERDCS--IQR----R-NQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQV 364 (523)
Q Consensus 292 ~~~~~~~~--~~~----~-~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g 364 (523)
........ ... . ........|+. ++++..+++.+.+.+++++||+.|++++||+++++|+++++|||||+|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~-l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~~iEiN~rpg~ 277 (306)
T 1iow_A 199 PSIRIQPSGTFYDYEAKFLSDETQYFCPAG-LEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGM 277 (306)
T ss_dssp CCEEEECSSSSSCHHHHHTCSCCEEESSCC-CCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEECTTSCEEEEEEESSCCC
T ss_pred ceEEEEeCCCeEchhheecCCCeeEEcCCC-CCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEcCCCCEEEEEecCCCCC
Confidence 33221100 000 0 11233456765 8999999999999999999999999999999998899999999999987
Q ss_pred Cc----cceeeecCCCHHHHHHHHH
Q 009903 365 EH----PVTEMISSVDLIEEQIHVA 385 (523)
Q Consensus 365 ~~----~~~~~~~Gidl~~~~~~~~ 385 (523)
+. +.....+|+|+.++++++.
T Consensus 278 ~~~s~~p~~~~~~G~~~~~~~~~~~ 302 (306)
T 1iow_A 278 TSHSLVPMAARQAGMSFSQLVVRIL 302 (306)
T ss_dssp STTCHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHcCCCHHHHHHHHH
Confidence 53 2234568999999998865
No 43
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=100.00 E-value=2.1e-34 Score=295.44 Aligned_cols=301 Identities=17% Similarity=0.204 Sum_probs=224.8
Q ss_pred ccEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCccccccC-----------------eeEEcCCCC
Q 009903 71 QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD-----------------ESVCIGEAP 124 (523)
Q Consensus 71 ~k~ILi~g~g~---------~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad-----------------~~~~~~~~~ 124 (523)
++||.|+-+|. +|..+++++.+.||+|+.++.+.+.........+ ....+.+..
T Consensus 3 ~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (364)
T 3i12_A 3 KLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGIDKAGQWHVNDAENYLQNADDPAHIALRPSAISLAQVPGK 82 (364)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEECSSSSBSSTTCTTTCCBCCCSCBEEECTTC
T ss_pred ccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEECCCCCEEecccchhhhccccccccccccccccceecccc
Confidence 45677765442 4778999999999999999765432111000000 001111000
Q ss_pred CCCCCCCHHHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCC
Q 009903 125 SSQSYLLIPNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGS 203 (523)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~id~Vi~~-~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~ 203 (523)
........ .......++|+|++. +|...|+..++.+++.+|+|++|++.+++..+.||..++++|+++|||+|++
T Consensus 83 ~~~~~~~~---~~~~~~~~~D~vf~~lhG~~gEdg~iq~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~- 158 (364)
T 3i12_A 83 HQHQLINA---QNGQPLPTVDVIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPF- 158 (364)
T ss_dssp SSSCEEET---TTCCBCCCCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCE-
T ss_pred cccceecc---ccccccCCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHHCHHHHHHHHHHCCCCCCCE-
Confidence 00000000 000012569999998 7888899999999999999999999999999999999999999999999999
Q ss_pred CccCCCHH----HHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEE
Q 009903 204 DGLLQSTE----EAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIE 279 (523)
Q Consensus 204 ~~~~~s~~----e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~s 279 (523)
..+.+.+ ++.++.+++|||+||||..|++|.||+++++.+|+.++++.+... +..+|||+||+| +|++
T Consensus 159 -~~~~~~~~~~~~~~~~~~~lg~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~~------~~~vlVEe~I~G-~E~~ 230 (364)
T 3i12_A 159 -ITLTRTNRHAFSFAEVESRLGLPLFVKPANQGSSVGVSKVANEAQYQQAVALAFEF------DHKVVVEQGIKG-REIE 230 (364)
T ss_dssp -EEEETTTGGGCCHHHHHHHHCSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHH------CSEEEEEECCCS-EEEE
T ss_pred -EEEEccccchhhHHHHHHhcCCCEEEEECCCCCCcCeEEeCCHHHHHHHHHHHHhc------CCcEEEEcCcCC-eEEE
Confidence 6677666 777888899999999999999999999999999999999887654 478999999999 9999
Q ss_pred EEEEEeCCCcEEEEeeece--eeeecC------ceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCC
Q 009903 280 FQVLADKYGNVVHFGERDC--SIQRRN------QKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERG 351 (523)
Q Consensus 280 v~v~~d~~g~v~~~~~~~~--~~~~~~------~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G 351 (523)
+.++.++...+...++... .++... ......+|++ ++++..+++.+.+.+++++||+.|++++||+++++|
T Consensus 231 v~vl~~~~~~~~~~~ei~~~~~~~~~~~ky~~~~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~g 309 (364)
T 3i12_A 231 CAVLGNDNPQASTCGEIVLNSEFYAYDTKYIDDNGAQVVVPAQ-IPSEVNDKIRAIAIQAYQTLGCAGMARVDVFLTADN 309 (364)
T ss_dssp EEEEESSSCEEEEEEEEECCTTCC--TTTTSGGGGCEEESSCS-SCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTC
T ss_pred EEEEeCCCceEeeeEEEecCCCccCHHHcccCCCceEEEeCCC-CCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEecCC
Confidence 9999886544444443210 011111 1144456776 999999999999999999999999999999999889
Q ss_pred CEEEEEEecCCCCC----ccceeeecCCCHHHHHHHH
Q 009903 352 SFYFMEMNTRIQVE----HPVTEMISSVDLIEEQIHV 384 (523)
Q Consensus 352 ~~~liEiNpR~~g~----~~~~~~~~Gidl~~~~~~~ 384 (523)
++|++|||+|++.+ .+....++|+|+.+++.++
T Consensus 310 ~~~vlEiN~~Pg~t~~s~~p~~~~a~G~~~~~l~~~l 346 (364)
T 3i12_A 310 EVVINEINTLPGFTNISMYPKLWQASGLGYTDLISRL 346 (364)
T ss_dssp CEEEEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHH
T ss_pred CEEEEEeeCCCCCCCCCHHHHHHHHhCcCHHHHHHHH
Confidence 99999999999765 2344456899998866554
No 44
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=100.00 E-value=4e-35 Score=301.02 Aligned_cols=300 Identities=18% Similarity=0.231 Sum_probs=219.9
Q ss_pred ccEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCcccc-c---cC--eeEEcCCCCCCCCCCCHHHH
Q 009903 71 QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-L---AD--ESVCIGEAPSSQSYLLIPNV 135 (523)
Q Consensus 71 ~k~ILi~g~g~---------~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~-~---ad--~~~~~~~~~~~~~~~~~~~l 135 (523)
+++|+|+++|. ++..+++++++.|++++.++.+.+....... . ++ ..+.+. .+....+ ..+
T Consensus 3 ~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~ 78 (364)
T 2i87_A 3 KENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIKSTDELHLE-NGEALEI---SQL 78 (364)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEECTTCCEEEECCCCSCCCSGGGSCGG-GSEEECS---SGG
T ss_pred CcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEcCCCCEEeccccccccccchhhccc-ccccccc---ccc
Confidence 46788887763 4788999999999999999765443211000 0 00 001010 0000000 011
Q ss_pred HHH-HHHcCCCEEEeCC-CcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHH--
Q 009903 136 LSA-AISRGCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTE-- 211 (523)
Q Consensus 136 ~~~-~~~~~id~Vi~~~-g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~-- 211 (523)
+.. .+..++|+|++.. |...|+..++.+++.+|++++|++.+++..+.||..++++|+++|||+|++ ..+.+.+
T Consensus 79 ~~~~~~~~~~D~v~~~~~g~~~ed~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~ 156 (364)
T 2i87_A 79 LKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPY--ISFLRSEYE 156 (364)
T ss_dssp GGBCTTSSBCSEEEEECCCSSSCTTHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHHTCCCCCE--EEEEHHHHH
T ss_pred ccccccccCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCE--EEEechhhc
Confidence 110 0245799999974 666677788899999999999999999999999999999999999999999 6666655
Q ss_pred -----HHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeC
Q 009903 212 -----EAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADK 286 (523)
Q Consensus 212 -----e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~ 286 (523)
++.+++++++||+||||..|++|.||.++++.+++.++++.+.. .+..+|||+||+| +|+++.++.++
T Consensus 157 ~~~~~~~~~~~~~~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~I~G-~E~~v~vl~~~ 229 (364)
T 2i87_A 157 KYEHNILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQ------FDRKLVIEQGVNA-REIEVAVLGND 229 (364)
T ss_dssp HHHHHHHHHHHHHCCSSEEEEESSCSSCTTCEEESSHHHHHHHHHHHHT------TCSEEEEEECCCC-EEEEEEEEESS
T ss_pred ccchhHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------cCCeEEEEeCccC-eEEEEEEEcCC
Confidence 56677788999999999999999999999999999999887643 2478999999999 99999999876
Q ss_pred CCcEEEEeeece--eeeecCc-----eeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEe
Q 009903 287 YGNVVHFGERDC--SIQRRNQ-----KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMN 359 (523)
Q Consensus 287 ~g~v~~~~~~~~--~~~~~~~-----~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiN 359 (523)
++.++..++... .++.... ......|+. ++++..+++.+++.+++++||+.|++++||+++++|++||+|||
T Consensus 230 ~~~~~~~~e~~~~~~~~~~~~k~~~g~~~~~~pa~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~g~~~viEiN 308 (364)
T 2i87_A 230 YPEATWPGEVVKDVAFYDYKSKYKDGKVQLQIPAD-LDEDVQLTLRNMALEAFKATDCSGLVRADFFVTEDNQIYINETN 308 (364)
T ss_dssp SCEECCCEEECCSCCC-----------CCEESSCS-SCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEE
T ss_pred CcEEeeeEEEecCCCcCCHHHcccCCCeeEEeCCC-CCHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEecCCCEEEEEEe
Confidence 433333332221 0111111 122346775 89999999999999999999999999999999988999999999
Q ss_pred cCCCCCc----cceeeecCCCHHHHHHHH
Q 009903 360 TRIQVEH----PVTEMISSVDLIEEQIHV 384 (523)
Q Consensus 360 pR~~g~~----~~~~~~~Gidl~~~~~~~ 384 (523)
||+|++. +....++|+|+.+++.++
T Consensus 309 ~rpg~t~~s~~p~~~~~~G~~~~~l~~~l 337 (364)
T 2i87_A 309 AMPGFTAFSMYPKLWENMGLSYPELITKL 337 (364)
T ss_dssp SSCCCSTTSHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCCCchhHHHHHHHHhCCCHHHHHHHH
Confidence 9998752 223346899997765443
No 45
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=100.00 E-value=2.1e-35 Score=304.57 Aligned_cols=301 Identities=18% Similarity=0.205 Sum_probs=224.3
Q ss_pred ccEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCcccccc-----------------CeeEEcCCCC
Q 009903 71 QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLA-----------------DESVCIGEAP 124 (523)
Q Consensus 71 ~k~ILi~g~g~---------~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~a-----------------d~~~~~~~~~ 124 (523)
++||.|+-+|. +|..+++++++.||+|+.++.+.+......... ...+.+.+..
T Consensus 22 ~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (386)
T 3e5n_A 22 KIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDKQGQWHVNDPDSFLLHADDPARIALHRSGRGVALLPGA 101 (386)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEECGGGSEESTTCTTTCEECCCCCCEEECTTC
T ss_pred CceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEECCCCCEEecccchhhccccccccccccccccceeeccCc
Confidence 45777765543 478899999999999999976544211000000 0011111100
Q ss_pred CCCCCCCHHHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCC
Q 009903 125 SSQSYLLIPNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGS 203 (523)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~id~Vi~~-~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~ 203 (523)
........ .......++|+|+|. +|...|+..++.+++.+|+|++|++..++..+.||..++++|+++|||+|++
T Consensus 102 ~~~~~~~~---~~~~~~~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~- 177 (386)
T 3e5n_A 102 QQQQLRPI---QPEQALAQIDVVFPIVHGTLGEDGSLQGLLRMANLPFVGSGVLGSAVAMDKDMAKRVLRDARLAVAPF- 177 (386)
T ss_dssp SSSCEEEC---C--CCCCCCSEEEEEECSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHBHHHHHHHHHHTTCCBCCE-
T ss_pred cccceecc---ccccccCCCCEEEEcCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCCCCE-
Confidence 00000000 000123579999998 7888888889999999999999999999999999999999999999999999
Q ss_pred CccCCCHH----HHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEE
Q 009903 204 DGLLQSTE----EAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIE 279 (523)
Q Consensus 204 ~~~~~s~~----e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~s 279 (523)
..+.+.+ ++.++.+++|||+||||..+++|.||+++++.+|+.++++.+... +..+|||+||+| +|++
T Consensus 178 -~~~~~~~~~~~~~~~~~~~lg~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~~------~~~vlVEe~I~G-~E~~ 249 (386)
T 3e5n_A 178 -VCFDRHTAAHADVDTLIAQLGLPLFVKPANQGSSVGVSQVRTADAFAAALALALAY------DHKVLVEAAVAG-REIE 249 (386)
T ss_dssp -EEEEHHHHTTCCHHHHHHHHCSSEEEEESBSCSSTTCEEECSGGGHHHHHHHHTTT------CSEEEEEECCCS-EEEE
T ss_pred -EEEeCcccchhhHHHHHHhcCCCEEEEECCCCcCCCEEEECCHHHHHHHHHHHHhC------CCcEEEEcCCCC-eEEE
Confidence 6777777 788888899999999999999999999999999999999876432 478999999999 9999
Q ss_pred EEEEEeCCCcEEEEeeecee--eeecCc------eeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCC
Q 009903 280 FQVLADKYGNVVHFGERDCS--IQRRNQ------KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERG 351 (523)
Q Consensus 280 v~v~~d~~g~v~~~~~~~~~--~~~~~~------~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G 351 (523)
+.++.++...++..++.... ++.... .....+|+. ++++..+++.+.+.+++++||+.|++++||+++++|
T Consensus 250 v~vl~~~~~~~~~~gei~~~~~~~d~~~ky~~~~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~dg 328 (386)
T 3e5n_A 250 CAVLGNAVPHASVCGEVVVHDAFYSYATKYISEHGAEIVIPAD-IDAQTQQRIQQIAVQAYQALGCAGMARVDVFLCADG 328 (386)
T ss_dssp EEEECSSSCEEEEEEEECC-----------------CEESSCS-SCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEECTTC
T ss_pred EEEEeCCCceEEEeEEEEeCCcccchhcccCCCCCeEEEECCC-CCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEECCC
Confidence 99998866555544443321 111111 133355776 999999999999999999999999999999999889
Q ss_pred CEEEEEEecCCCCC----ccceeeecCCCHHHHHHHH
Q 009903 352 SFYFMEMNTRIQVE----HPVTEMISSVDLIEEQIHV 384 (523)
Q Consensus 352 ~~~liEiNpR~~g~----~~~~~~~~Gidl~~~~~~~ 384 (523)
++|++|||||+|.+ .+....++|+|+.+++.++
T Consensus 329 ~~~vlEiN~~PG~t~~S~~p~~~~~~Gi~~~~li~~l 365 (386)
T 3e5n_A 329 RIVINEVNTLPGFTRISVYPKLWQASGLDYRGLITRL 365 (386)
T ss_dssp CEEEEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHH
T ss_pred cEEEEEeECCCCCCccCHHHHHHHHhCCCHHHHHHHH
Confidence 99999999999865 2334456899998876554
No 46
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=100.00 E-value=4.8e-34 Score=293.49 Aligned_cols=299 Identities=18% Similarity=0.245 Sum_probs=213.6
Q ss_pred ccEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCccc-cccCeeE---EcCCCCCCC--CCCCHHHH
Q 009903 71 QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLADESV---CIGEAPSSQ--SYLLIPNV 135 (523)
Q Consensus 71 ~k~ILi~g~g~---------~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-~~ad~~~---~~~~~~~~~--~~~~~~~l 135 (523)
++||+|+-+|. +|..+++++++.||+|+.++.+.+...... ...+... .+....... ...+...+
T Consensus 37 ~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (383)
T 3k3p_A 37 KETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFITQAGDFIKTQEFDSQPSETDKLMTNDTIIASQKIKPSDI 116 (383)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEEEEESSCCC--CCCCCTTSCCGGGEECGGGG
T ss_pred CCeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEecCCCCEEeccccccccccccccccccccccccccccccc
Confidence 34777775543 488999999999999999975543211100 0000000 000000000 00000001
Q ss_pred HHHHHHcCCCEEEeC-CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCC-CCCCCCCCccCCCH---
Q 009903 136 LSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAG-VPTVPGSDGLLQST--- 210 (523)
Q Consensus 136 ~~~~~~~~id~Vi~~-~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~G-ip~p~~~~~~~~s~--- 210 (523)
. .++|+|++. +|...|+..++.+++.+|+|++|++..++..+.||..++++|+++| ||+|++ ..+.+.
T Consensus 117 ---~--~~~D~vf~~lhG~~GEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~G~Ipvp~~--~~~~~~~~~ 189 (383)
T 3k3p_A 117 ---Y--EEEAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGTNILSSSVAMDKITTNQVLESATTIPQVAY--VALIEGEPL 189 (383)
T ss_dssp ---C--CTTCEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHHCCCCBCCE--EEEETTSCH
T ss_pred ---c--cCCCEEEEcCCCCCcchHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHhCCCcCCCCE--EEEeCccch
Confidence 0 369999987 5667788899999999999999999999999999999999999999 999999 555544
Q ss_pred -HHHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCc
Q 009903 211 -EEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGN 289 (523)
Q Consensus 211 -~e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~ 289 (523)
+++.++.++++||+||||..+++|.||+++++.+|+.++++.+... +..+|||+||+| +|+++.++.++...
T Consensus 190 ~~~~~~~~~~lg~PvvVKP~~ggss~GV~~v~~~~el~~al~~a~~~------~~~vlVEe~I~G-~E~~v~vl~d~~~~ 262 (383)
T 3k3p_A 190 ESKLAEVEEKLIYPVFVKPANMGSSVGISKAENRTDLKQAIALALKY------DSRVLIEQGVDA-REIEVGILGNTDVK 262 (383)
T ss_dssp HHHHHHHHHHCCSSEEEEECC------CEEESSHHHHHHHHHHHHHH------CSEEEEEECCCS-EEEEEEEEESSSCE
T ss_pred hHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhC------CCeEEEEcCCCC-eEEEEEEEeCCCee
Confidence 5677888899999999999999999999999999999999887654 478999999999 99999999875433
Q ss_pred EEEEeeec--eeeeecC-----ceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCC
Q 009903 290 VVHFGERD--CSIQRRN-----QKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRI 362 (523)
Q Consensus 290 v~~~~~~~--~~~~~~~-----~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~ 362 (523)
+....+.. ..+..+. ......+|+. ++++..+++.+.+.+++++||+.|++++||+++++|++||+|||||+
T Consensus 263 ~~~~~ei~~~~~~~d~~~ky~~g~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~~g~~~vlEINtrP 341 (383)
T 3k3p_A 263 TTLPGEIVKDVAFYDYEAKYIDNKITMAIPAE-IDPVIVEKMRDYAATAFRTLGCCGLSRCDFFLTEDGKVYLNELNTMP 341 (383)
T ss_dssp ECCCEEEC-----------------CEESSCC-CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEESSC
T ss_pred EEeeEEEecCCCccchhhcccCCCeeEEecCC-CCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEECCCCEEEEEeeCCC
Confidence 32222221 1111111 1233456776 99999999999999999999999999999999988999999999999
Q ss_pred CCC----ccceeeecCCCHHHHHHHH
Q 009903 363 QVE----HPVTEMISSVDLIEEQIHV 384 (523)
Q Consensus 363 ~g~----~~~~~~~~Gidl~~~~~~~ 384 (523)
|.+ .+....+.|+|+.+++.++
T Consensus 342 G~t~~S~~p~~~~a~Gi~~~~li~~l 367 (383)
T 3k3p_A 342 GFTQWSMYPLLWENMGLSYSVLIEEL 367 (383)
T ss_dssp CCC--CHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCcccHHHHHHHHhCCCHHHHHHHH
Confidence 854 3444456899988776554
No 47
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=100.00 E-value=7.2e-34 Score=291.29 Aligned_cols=301 Identities=16% Similarity=0.183 Sum_probs=214.3
Q ss_pred ccEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCcccccc----------------CeeEEcCCCCC
Q 009903 71 QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLA----------------DESVCIGEAPS 125 (523)
Q Consensus 71 ~k~ILi~g~g~---------~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~a----------------d~~~~~~~~~~ 125 (523)
+++|.|+-+|. +|..+++++.+.||+|+.++.+.+.......-. +..+.+.+...
T Consensus 4 ~~~v~vl~GG~S~E~evSl~Sa~~v~~~l~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 83 (372)
T 3tqt_A 4 KLHISVLCGGQSTEHEISIQSAKNIVNTLDAAKYLISVIFIDHVGRWYLIDQPEMFLAHSPDHLVKEGSARPITIAFGDA 83 (372)
T ss_dssp SEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEECCHHHHHHSCHHHHHHHTCSEEEEECTTCS
T ss_pred CCEEEEEeccCCCccHhHHHHHHHHHHHHhhcCceEEEEEECCCCCEEeccchhhhhccccccccccccccceeeccccc
Confidence 34677765542 378899999999999999976544211100000 01111100000
Q ss_pred CCCCCCHHHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCC
Q 009903 126 SQSYLLIPNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD 204 (523)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~id~Vi~~-~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~ 204 (523)
........ .-....++|+|+|. +|...|+..++.+++.+|+|++|++..++..+.||..++++|+++|||+|++
T Consensus 84 ~~~~~~~~---~~~~~~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~-- 158 (372)
T 3tqt_A 84 AKPWQSLN---GDGRRYSADCVFPMVHGTQGEDGALQGLLELLNLPYVGANVQSSAVCMEKDLTKTVLRAGGIPVVDW-- 158 (372)
T ss_dssp SCCEEEC-------CEECCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCCBCCC--
T ss_pred ccceeecc---ccccccCCCEEEEcCCCCCCcCHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCE--
Confidence 00000000 00001469999998 6777789899999999999999999999999999999999999999999999
Q ss_pred ccCCCHHH----HHHHHHhcCCc-EEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEE
Q 009903 205 GLLQSTEE----AVKLADELGFP-VMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIE 279 (523)
Q Consensus 205 ~~~~s~~e----~~~~~~~~g~P-~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~s 279 (523)
..+.+.++ +.++.+++||| +||||..+++|.||.++++.+||.++++.+... +..+|||+||+| +|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~lg~P~vvVKP~~ggss~Gv~~v~~~~eL~~a~~~a~~~------~~~vlVEe~I~G-~E~~ 231 (372)
T 3tqt_A 159 HTLSPRDATEGVYQRLLDRWGTSELFVKAVSLGSSVATLPVKTETEFTKAVKEVFRY------DDRLMVEPRIRG-REIE 231 (372)
T ss_dssp EEECTTSCCTTHHHHHHHHC---CEEEEESSCCSGGGEEEECSHHHHHHHHHHHTTT------CSCEEEEECCCS-EEEE
T ss_pred EEEechhhhhhHHHHHHHhcCCCeEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhc------CCCEEEECCCCC-EEEE
Confidence 55655543 55677899999 999999999999999999999999998876432 478999999999 9999
Q ss_pred EEEEEeCCCcEEEEeeece--eeeec----C-ce-eeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCC
Q 009903 280 FQVLADKYGNVVHFGERDC--SIQRR----N-QK-LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERG 351 (523)
Q Consensus 280 v~v~~d~~g~v~~~~~~~~--~~~~~----~-~~-~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G 351 (523)
+.++.++...+....+... .+... . .. ....+|+. ++++..+++.+++.+++++||+.|++++||+++++|
T Consensus 232 v~vl~~~~~~~~~~~ei~~~~~~~d~~~ky~~g~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~rvDf~~~~dg 310 (372)
T 3tqt_A 232 CAVLGNGAPKASLPGEIIPHHDYYSYDAKYLDPNGATTTTSVD-LSESVTKQIQQIAIDAFKMVHCSGMARVDFFVTPNN 310 (372)
T ss_dssp EEEEESSSCEECCCEEEECC---------------CEEESCCC-CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTC
T ss_pred EEEEeCCCceEeeeEEEecCCCccchhhcccCCCceEEEeCCC-CCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEeCCC
Confidence 9999875321111121110 01111 1 11 34456776 999999999999999999999999999999999889
Q ss_pred CEEEEEEecCCCCC----ccceeeecCCCHHHHHHHH
Q 009903 352 SFYFMEMNTRIQVE----HPVTEMISSVDLIEEQIHV 384 (523)
Q Consensus 352 ~~~liEiNpR~~g~----~~~~~~~~Gidl~~~~~~~ 384 (523)
++||+|||||||.+ .+....++|+|+.+++.++
T Consensus 311 ~~~vlEINt~PG~t~~S~~p~~~~~~G~~~~~li~~l 347 (372)
T 3tqt_A 311 KVLVNEINTIPGFTNISMYPKMWEASGLPCPNLLDQL 347 (372)
T ss_dssp CEEEEEEESSCCCSTTCHHHHHHHHTTCCHHHHHHHH
T ss_pred cEEEEEEECCCCcCccCHHHHHHHHhCCCHHHHHHHH
Confidence 99999999999754 2334556899988776554
No 48
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=100.00 E-value=8.3e-34 Score=284.38 Aligned_cols=272 Identities=20% Similarity=0.262 Sum_probs=206.0
Q ss_pred ccEEEEEcCc---------HHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHH
Q 009903 71 QEKILVANRG---------EIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS 141 (523)
Q Consensus 71 ~k~ILi~g~g---------~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~ 141 (523)
.+||+|+.+| .++..+++++++.|++++.++.+.... + +.+.
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~---------------------------~--~~~~ 53 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMD---------------------------L--IEKA 53 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGG---------------------------H--HHHT
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchh---------------------------H--HHhc
Confidence 3578888766 347889999999999999995431100 0 1122
Q ss_pred cCCCEEEeCC-CcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHH-HHHh
Q 009903 142 RGCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVK-LADE 219 (523)
Q Consensus 142 ~~id~Vi~~~-g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~-~~~~ 219 (523)
.++|.|++.. +...++..+..+++.+|++++|++++++..+.||..++++|+++|||+|++ ..+.+.+++.+ ++++
T Consensus 54 ~~~D~v~~~~~~~~ge~~~~~~~le~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~--~~~~~~~~~~~~~~~~ 131 (307)
T 3r5x_A 54 KDIDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDW--IELTKMEDLNFDELDK 131 (307)
T ss_dssp TTCSEEEECCCSHHHHSSHHHHHHHHHTCCBSSSCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEEESSSCCCHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCE--EEEeChhhhhHHHHHh
Confidence 4799999874 333356677889999999999999999999999999999999999999999 66766665543 6788
Q ss_pred cCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeecee
Q 009903 220 LGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCS 299 (523)
Q Consensus 220 ~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~ 299 (523)
++||+||||..|+||.||+++++.+++.++++.+... +..++|||||+| +|+++.++ + |+++.+......
T Consensus 132 ~~~P~vvKP~~~~~s~Gv~~v~~~~el~~~~~~~~~~------~~~~lvee~i~G-~e~~v~v~-~--g~~~~~~~~~~~ 201 (307)
T 3r5x_A 132 LGFPLVVKPNSGGSSVGVKIVYDKDELISMLETVFEW------DSEVVIEKYIKG-EEITCSIF-D--GKQLPIISIRHA 201 (307)
T ss_dssp HCSSEEEEECC----CCCEEECSHHHHHHHHHHHHHH------CSEEEEEECCCS-EEEEEEEE-T--TEECCCEEEEEE
T ss_pred cCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCCEEEECCcCC-EEEEEEEE-C--CEEeeEEEEEcC
Confidence 9999999999999999999999999999999887653 479999999999 99999986 3 244222121111
Q ss_pred e--eecCcee----eEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCC----ccce
Q 009903 300 I--QRRNQKL----LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVE----HPVT 369 (523)
Q Consensus 300 ~--~~~~~~~----~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~----~~~~ 369 (523)
. .....+. ....|.. ++++..+++.+++.+++++||+.|++++||+++ +|++||+|||||+|.+ .+..
T Consensus 202 ~~~~~~~~~~~~~g~~~~p~~-l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~-~g~~~vlEiN~rpg~~~~s~~~~~ 279 (307)
T 3r5x_A 202 AEFFDYNAKYDDASTIEEVIE-LPAELKERVNKASLACYKALKCSVYARVDMMVK-DGIPYVMEVNTLPGMTQASLLPKS 279 (307)
T ss_dssp EEEETTEEEEEEEEEEEEECC-CCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEE-TTEEEEEEEESSCCCSTTSHHHHH
T ss_pred CcccChhhcCCCCCCeEecCC-CCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEE-CCeEEEEEEcCCCCCCccCHHHHH
Confidence 1 1111111 1222664 899999999999999999999999999999999 4779999999999765 2334
Q ss_pred eeecCCCHHHHHHHHH
Q 009903 370 EMISSVDLIEEQIHVA 385 (523)
Q Consensus 370 ~~~~Gidl~~~~~~~~ 385 (523)
...+|+|+.+.+.++.
T Consensus 280 ~~~~G~~~~~li~~ll 295 (307)
T 3r5x_A 280 ADAAGIHYSKLLDMII 295 (307)
T ss_dssp HHHTTCCHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHH
Confidence 5678999988766553
No 49
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=100.00 E-value=6.8e-34 Score=289.58 Aligned_cols=296 Identities=17% Similarity=0.201 Sum_probs=219.0
Q ss_pred ccEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCccc-----ccc----CeeEEcCCCCCCCCCCCH
Q 009903 71 QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHV-----KLA----DESVCIGEAPSSQSYLLI 132 (523)
Q Consensus 71 ~k~ILi~g~g~---------~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-----~~a----d~~~~~~~~~~~~~~~~~ 132 (523)
++||+|+++|. +|..+++++++.||+++.++.+.+...... .+. +. +++.+.+....
T Consensus 3 ~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---- 77 (343)
T 1e4e_A 3 RIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITKSGVWKMCEKPCAEWENENCYS-AVLSPDKKMHG---- 77 (343)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEESCCCTTCCCTTCEE-EEECSCTTTCE----
T ss_pred CcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEcCCCCEEecccchhhcccccccc-eeccccccccc----
Confidence 46788887763 478899999999999999976554321100 011 11 22221111000
Q ss_pred HHH-HHH--HHHcCCCEEEeC-CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCC
Q 009903 133 PNV-LSA--AISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQ 208 (523)
Q Consensus 133 ~~l-~~~--~~~~~id~Vi~~-~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~ 208 (523)
.+ ... .+..++|+|++. +|...|+..++.+++.+|+|++|++.+++..+.||..++++|+++|||+|++ ..+.
T Consensus 78 -~~~~~~~~~~~~~~D~v~~~~~g~~ged~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~ 154 (343)
T 1e4e_A 78 -LLVKKNHEYEINHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQSSAICMDKSLTYIVAKNAGIATPAF--WVIN 154 (343)
T ss_dssp -EEEEETTEEEEEECSEEEECCCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCE--EEEC
T ss_pred -ceeecccccccccCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCcCCE--EEEe
Confidence 01 000 123569999998 5555577778899999999999999999999999999999999999999998 5666
Q ss_pred CHHHHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCC
Q 009903 209 STEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYG 288 (523)
Q Consensus 209 s~~e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g 288 (523)
+.+++.. ++++||+||||..+++|.||.++++.+|+.++++.+... +..+|||+||+| +|+++.++.++.+
T Consensus 155 ~~~~~~~--~~~~~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~~------~~~~lvEe~I~G-~E~~v~vl~~~~~ 225 (343)
T 1e4e_A 155 KDDRPVA--ATFTYPVFVKPARSGSSFGVKKVNSADELDYAIESARQY------DSKILIEQAVSG-CEVGCAVLGNSAA 225 (343)
T ss_dssp TTCCCCG--GGSCSCEEEEESSCCTTTTCEEECSGGGHHHHHHHHTTT------CSSEEEEECCCS-EEEEEEEEEETTC
T ss_pred chhhhhh--hccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCcEEEEeCcCC-eEEEEEEEeCCCC
Confidence 6655432 678999999999999999999999999999998876432 478999999999 9999999988654
Q ss_pred cEEEEeeecee----eee----c-----CceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEE
Q 009903 289 NVVHFGERDCS----IQR----R-----NQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYF 355 (523)
Q Consensus 289 ~v~~~~~~~~~----~~~----~-----~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~l 355 (523)
+..+...+.. +.. . ........|+. ++++..+++.+++.+++++||+.|++++||+++++|++||
T Consensus 226 -~~~~~~~ei~~~~~~~~~~~k~~~~~~~g~~~~~~p~~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~g~~~v 303 (343)
T 1e4e_A 226 -LVVGEVDQIRLQYGIFRIHQEVEPEKGSENAVITVPAD-LSAEERGRIQETVKKIYKTLGCRGLARVDMFLQDNGRIVL 303 (343)
T ss_dssp -CEECCCEEEEESSSCCCGGGSSSGGGCCSSEEECSSCS-SCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTCCEEE
T ss_pred -eEEeeeEEEeeCCCccCHhhcccccCCCCCeeEEeCCC-CCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEeCCCCEEE
Confidence 3222211111 111 1 11233446765 8999999999999999999999999999999998899999
Q ss_pred EEEecCCCCCc----cceeeecCCCHHHHHHHHH
Q 009903 356 MEMNTRIQVEH----PVTEMISSVDLIEEQIHVA 385 (523)
Q Consensus 356 iEiNpR~~g~~----~~~~~~~Gidl~~~~~~~~ 385 (523)
+|||+|+|++. +....++|+|+.+++.++.
T Consensus 304 iEiN~rpg~t~~s~~p~~~~~~G~~~~~l~~~li 337 (343)
T 1e4e_A 304 NEVNTLPGFTSYSRYPRMMAAAGISLPELIDRLI 337 (343)
T ss_dssp EEEESSCCCSTTCHHHHHHHHTTCCHHHHHHHHH
T ss_pred EEeeCCCCCCcccHHHHHHHHhCCCHHHHHHHHH
Confidence 99999998762 3334557999988877654
No 50
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=100.00 E-value=6.1e-34 Score=290.15 Aligned_cols=294 Identities=18% Similarity=0.181 Sum_probs=215.7
Q ss_pred cEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCccc-----cccC-e--eEEcCCCCCCCCCCCHHH
Q 009903 72 EKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHV-----KLAD-E--SVCIGEAPSSQSYLLIPN 134 (523)
Q Consensus 72 k~ILi~g~g~---------~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-----~~ad-~--~~~~~~~~~~~~~~~~~~ 134 (523)
+||.|+-+|. +|..+++++++.||+++.++.+.+...... .+.. . .-.+.+ ...+. .
T Consensus 4 ~~v~vl~GG~s~e~~vSl~sa~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~ 77 (346)
T 3se7_A 4 MKIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFYLGITKSGAWQLCDGPGENWEDGNCRPAVLSP--DRSVH----G 77 (346)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEESCSSSSSSSSCCEEEEECC--CTTTC----E
T ss_pred CEEEEEeeecCCCccHHHHHHHHHHHHhcccCCEEEEEEECCCCCEEeccchhhhhcccccccceecc--CccCc----c
Confidence 4676665542 488999999999999999976543211000 0000 0 000000 00000 0
Q ss_pred HHH----HHHHcCCCEEEeC-CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCC
Q 009903 135 VLS----AAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQS 209 (523)
Q Consensus 135 l~~----~~~~~~id~Vi~~-~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s 209 (523)
+.. ..+..++|+|+|. +|...|+..+..+++.+|+|++|++.+++..+.||..++++|+++|||+|++ ..+.+
T Consensus 78 ~~~~~~~~~~~~~~D~v~~~lhG~~gedg~iq~~le~~gip~~g~~~~a~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~ 155 (346)
T 3se7_A 78 LLVLEQGKYETIRLDLVLPVLHGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLTYLVARSAGIATPNF--WTVTA 155 (346)
T ss_dssp EEEEETTEEEEEECSEEEECCCSTTTTSSHHHHHHHHHCCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCE--EEEET
T ss_pred ceecccccccccCCCEEEEccCCCCCCChHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHcCcCcCCE--EEEcC
Confidence 000 0123569999998 5777888889999999999999999999999999999999999999999999 55655
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCc
Q 009903 210 TEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGN 289 (523)
Q Consensus 210 ~~e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~ 289 (523)
.+ ..+.++++||+||||..+++|.|++++++.+|+.++++.+... +..+|||+||+| +|+++.++.++.+
T Consensus 156 ~~--~~~~~~lg~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~~------~~~vlvEe~I~G-~E~~v~vl~~~~~- 225 (346)
T 3se7_A 156 DE--KIPTDQLTYPVFVKPARSGSSFGVSKVAREEDLQGAVEAAREY------DSKVLIEEAVIG-TEIGCAVMGNGPE- 225 (346)
T ss_dssp TS--CCCTTTCCSSEEEEESSCCTTTTCEEECSHHHHHHHHHHHTTT------CSEEEEEECCCS-EEEEEEEEEETTE-
T ss_pred cH--HHHHHhcCCCEEEEeCCCCCCcCEEEECCHHHHHHHHHHHHhC------CCcEEEEeCcCC-EEEEEEEEecCCC-
Confidence 44 3456688999999999999999999999999999999876432 478999999999 9999999998543
Q ss_pred EEEEe--eecee--eeec----C-----ceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEE
Q 009903 290 VVHFG--ERDCS--IQRR----N-----QKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFM 356 (523)
Q Consensus 290 v~~~~--~~~~~--~~~~----~-----~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~li 356 (523)
...+. +.... +... . .......|++ ++++..+++.+.+.+++++||+.|++++||+++++|++|++
T Consensus 226 ~~~~~~~e~~~~~~~~d~~q~~~~ky~~~~~~~~~pa~-l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~vl 304 (346)
T 3se7_A 226 LITGEVDQITLSHGFFKIHQESTPESGSDNSAVTVPAD-ISTTSRSLVQDTAKAVYRALGCRGLSRVDLFLTEDGKVVLN 304 (346)
T ss_dssp EEECCCEEECCC--------------CGGGSCEESSCC-CCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEECTTSCEEEE
T ss_pred eEEEeeEEEecCCCCcCcccchhccccCCCeeEEeCCC-CCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEeCCCCEEEE
Confidence 22222 21110 0111 0 1123346776 99999999999999999999999999999999988999999
Q ss_pred EEecCCCCC----ccceeeecCCCHHHHHHHH
Q 009903 357 EMNTRIQVE----HPVTEMISSVDLIEEQIHV 384 (523)
Q Consensus 357 EiNpR~~g~----~~~~~~~~Gidl~~~~~~~ 384 (523)
|||+|+|.+ .+....++|+|+.+++.++
T Consensus 305 EiN~rPG~t~~s~~p~~~~~~G~~~~~l~~~l 336 (346)
T 3se7_A 305 EVNTFPGMTSYSRYPRMMTAAGLSRADVIDRL 336 (346)
T ss_dssp EEESSCCCSTTCHHHHHHHHTTCCHHHHHHHH
T ss_pred EEeCCCCCCcccHHHHHHHHhCCCHHHHHHHH
Confidence 999999864 2333456999999876554
No 51
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-33 Score=289.33 Aligned_cols=230 Identities=20% Similarity=0.304 Sum_probs=187.0
Q ss_pred CCCEEEeC-CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHH--HHHHHHh
Q 009903 143 GCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEE--AVKLADE 219 (523)
Q Consensus 143 ~id~Vi~~-~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e--~~~~~~~ 219 (523)
++|+|+|. +|...|+..++.+++.+|+|++|++.+++..+.||..++++|+++|||+|++ ..+.+.++ ..+..++
T Consensus 109 ~~D~vfp~lhG~~gEdg~iq~lle~~gip~vG~~~~a~~~~~DK~~~k~~l~~~GIp~p~~--~~~~~~~~~~~~~~~~~ 186 (373)
T 3lwb_A 109 SVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAY--AVLRPPRSTLHRQECER 186 (373)
T ss_dssp TCSEEEECCEETTEECCHHHHHHHHHTCCBSSSCHHHHHHHHBHHHHHHHHHHTTCCBCCE--EEECTTCCCCCHHHHHH
T ss_pred CccEEEECCCCCCCccHHHHHHHHHcCCCccCCcHHHHHHHcCHHHHHHHHHHcCcCCCCE--EEEECcccchhHHHHHh
Confidence 69999998 4777889899999999999999999999999999999999999999999999 55655543 1334678
Q ss_pred cCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCc--EEEEeeec
Q 009903 220 LGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGN--VVHFGERD 297 (523)
Q Consensus 220 ~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~--v~~~~~~~ 297 (523)
++||+||||..+++|.||++|++.+||.++++.+... +..+|||+||+| +|+++.++.++.+. +....+..
T Consensus 187 lg~PvvVKP~~ggss~GV~~v~~~~eL~~a~~~a~~~------~~~vlVEe~I~G-~E~~v~vl~~~~~~~~~~~~~ei~ 259 (373)
T 3lwb_A 187 LGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRH------DPKVIVEAAISG-RELECGVLEMPDGTLEASTLGEIR 259 (373)
T ss_dssp HCSCEEEEESBCSTTTTCEEECSGGGHHHHHHHHHTT------CSSEEEEECCEE-EEEEEEEEECTTSCEEECCCEEEE
T ss_pred cCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCCEEEeCCCCC-eEEEEEEEECCCCceEEeeeeEEE
Confidence 9999999999999999999999999999999877543 478999999999 99999999987653 22222222
Q ss_pred ee--------eeecC-----ceeeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCC
Q 009903 298 CS--------IQRRN-----QKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQV 364 (523)
Q Consensus 298 ~~--------~~~~~-----~~~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g 364 (523)
.. ++... .......|+. ++++..+++.+++.+++++||+.|++++||+++++|+ ||+|||||+|.
T Consensus 260 ~~~~~~~~~~~~d~~~ky~~~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~dg~-~vlEIN~~PG~ 337 (373)
T 3lwb_A 260 VAGVRGREDSFYDFATKYLDDAAELDVPAK-VDDQVAEAIRQLAIRAFAAIDCRGLARVDFFLTDDGP-VINEINTMPGF 337 (373)
T ss_dssp CCSTTCSEESSSCHHHHHTCTTCEEESSCC-CCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEETTEE-EEEEEESSCCC
T ss_pred ccCCCCccccccchhhcccCCCceEEeCCC-CCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEECCCC-EEEEecCCCCC
Confidence 11 11110 1123446776 9999999999999999999999999999999999997 99999999975
Q ss_pred C----ccceeeecCCCHHHHHHH
Q 009903 365 E----HPVTEMISSVDLIEEQIH 383 (523)
Q Consensus 365 ~----~~~~~~~~Gidl~~~~~~ 383 (523)
+ .+....++|+|+.+++.+
T Consensus 338 t~~S~~p~~~~a~Gi~~~~li~~ 360 (373)
T 3lwb_A 338 TTISMYPRMWAASGVDYPTLLAT 360 (373)
T ss_dssp STTSHHHHHHHHTTCCHHHHHHH
T ss_pred CcccHHHHHHHHhCCCHHHHHHH
Confidence 5 233345799998665543
No 52
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*
Probab=100.00 E-value=8.7e-33 Score=278.78 Aligned_cols=290 Identities=21% Similarity=0.270 Sum_probs=212.9
Q ss_pred CccEEEEEcCcHH---------HHHHHHHHHHcCCcEEEEecCCCCCCcc-----ccccCeeEEcCCCCCCCCCCCHHHH
Q 009903 70 RQEKILVANRGEI---------AVRVIRTAHEMGIPCVAVYSTIDKDALH-----VKLADESVCIGEAPSSQSYLLIPNV 135 (523)
Q Consensus 70 ~~k~ILi~g~g~~---------~~~vi~aa~~~G~~vi~v~~~~~~~~~~-----~~~ad~~~~~~~~~~~~~~~~~~~l 135 (523)
|++||+|+.+|.+ |..+++++++ +++.++.+.+..... ..+.+....+.-... ... +
T Consensus 2 ~~~~v~vl~gg~s~E~~vSl~s~~~v~~al~~---~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~ 72 (322)
T 2fb9_A 2 EFMRVLLIAGGVSPEHEVSLLSAEGVLRHIPF---PTDLAVIAQDGRWLLGEKALTALEAKAAPEGEHPF---PPP---L 72 (322)
T ss_dssp CCCCEEEEEECSSTTHHHHHHHHHHHHHHCSS---CEEEEEECTTSCEECHHHHHHHTTSSCCCCCCBCS---SCC---C
T ss_pred CCcEEEEEeCCCchhHHHHHHHHHHHHHHhcc---CeEEEEEcCCCCEEecccchhhhccccccceeccc---ccc---c
Confidence 3467888876632 6788888877 777775443322110 012221100100000 000 1
Q ss_pred HHHHHHcCCCEEEeCC-CcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHH
Q 009903 136 LSAAISRGCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAV 214 (523)
Q Consensus 136 ~~~~~~~~id~Vi~~~-g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~ 214 (523)
+..++|+|++.. |...|+..++.+++.+|++++|++.+++..+.||..++++|+++|+|+|++ ..+.+.++
T Consensus 73 ----~~~~~D~v~~~~hg~~gedg~i~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~-- 144 (322)
T 2fb9_A 73 ----SWERYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPW--VAVRKGEP-- 144 (322)
T ss_dssp ----CCTTCSEEEEECCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEEETTSC--
T ss_pred ----cccCCCEEEEeCCCCCCccHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCE--EEEECchh--
Confidence 145799999984 777788888899999999999999999999999999999999999999998 55555443
Q ss_pred HHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEe
Q 009903 215 KLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFG 294 (523)
Q Consensus 215 ~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~ 294 (523)
+.. +++||+||||..|++|.|+.++++.+|+.++++.+... +..+|||+||+|.+|+++.++.++.+.+...+
T Consensus 145 ~~~-~~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~~------~~~vlvEe~I~G~~E~~v~vl~~~~~~~~~~~ 217 (322)
T 2fb9_A 145 PVV-PFDPPFFVKPANTGSSVGISRVERFQDLEAALALAFRY------DEKAVVEKALSPVRELEVGVLGNVFGEASPVG 217 (322)
T ss_dssp CCC-CSCSCEEEEETTCCTTTTCEEESSHHHHHHHHHHHTTT------CSEEEEEECCSSCEEEEEEEESSSSCEEEEEE
T ss_pred hhh-ccCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhc------CCeEEEEeCCCCCeeEEEEEEeCCCceEeeeE
Confidence 122 78999999999999999999999999999998876432 47899999999978999999987554454444
Q ss_pred eece--eeeecCce-----eeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCc-
Q 009903 295 ERDC--SIQRRNQK-----LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEH- 366 (523)
Q Consensus 295 ~~~~--~~~~~~~~-----~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~- 366 (523)
+... .+.....+ .....|+. ++++..+++.+.+.+++++||+.|++++||+++ +|++||+|||+|+|++.
T Consensus 218 ei~~~~~~~~~~~k~~~g~~~~~~Pa~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~-~g~~~vlEiN~rpg~t~~ 295 (322)
T 2fb9_A 218 EVRYEAPFYDYETKYTPGRAELLIPAP-LDPGTQETVQELALKAYKVLGVRGMARVDFFLA-EGELYLNELNTIPGFTPT 295 (322)
T ss_dssp EEEEECCEEETTTEEECCEEEEESSCC-CCTTHHHHHHHHHHHHHHHHTCCSEEEEEEEEE-TTEEEEEEEESSCCCSSS
T ss_pred EEeeCCCccCHHHcccCCCeEEEeCCC-CCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEE-CCcEEEEEEECCCCCCcc
Confidence 3321 12222211 23356776 899999999999999999999999999999999 88899999999998762
Q ss_pred ---cceeeecCCCHHHHHHHHH
Q 009903 367 ---PVTEMISSVDLIEEQIHVA 385 (523)
Q Consensus 367 ---~~~~~~~Gidl~~~~~~~~ 385 (523)
+....++|+|+.+++.++.
T Consensus 296 s~~p~~~~~~G~~~~~l~~~li 317 (322)
T 2fb9_A 296 SMYPRLFEAGGVAYPELLRRLV 317 (322)
T ss_dssp CHHHHHHHHTTCCHHHHHHHHH
T ss_pred cHHHHHHHHhCCCHHHHHHHHH
Confidence 2223468999888766543
No 53
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori}
Probab=100.00 E-value=3.5e-32 Score=278.60 Aligned_cols=230 Identities=16% Similarity=0.163 Sum_probs=183.1
Q ss_pred CCCEEEeC-CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHH--HHHHHHHh
Q 009903 143 GCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTE--EAVKLADE 219 (523)
Q Consensus 143 ~id~Vi~~-~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~--e~~~~~~~ 219 (523)
++|+|++. +|...|+..++.+++.+|++++|++.+++..+.||..++++|+++|||+|++ ..+.+.+ ++.+ +++
T Consensus 107 ~~D~v~~~lhg~~gedg~i~~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~-~~~ 183 (367)
T 2pvp_A 107 ELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRIEASVLSYNKYLTKLYAKDLGIKTLDY--VLLNEKNRANALD-LMN 183 (367)
T ss_dssp ECCSEEECCCSTTTTSSHHHHHHHHTTCCEESCCHHHHHHHHSHHHHHHHHHHHTCBCCCC--EEECTTTGGGHHH-HCC
T ss_pred CCCEEEEcCCCCCccHHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCcCCCCE--EEEeCCchHHHHH-Hhc
Confidence 68999997 5666678788899999999999999999999999999999999999999999 6666665 6666 778
Q ss_pred cCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEE-EEEEEeCCCcEEEEee-ec
Q 009903 220 LGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIE-FQVLADKYGNVVHFGE-RD 297 (523)
Q Consensus 220 ~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~s-v~v~~d~~g~v~~~~~-~~ 297 (523)
+|||+||||..+++|.||.++++.+||.++++.+... +..+|||+||+|.+||+ +++.. +|+++.... ..
T Consensus 184 lg~PvvVKP~~g~ss~Gv~~v~~~~el~~a~~~~~~~------~~~vlVEe~I~G~~E~svi~v~v--~g~~~~~~~ei~ 255 (367)
T 2pvp_A 184 FNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFEY------SKEVLIEPFIQGVKEYNLAGCKI--KKDFCFSYIEEP 255 (367)
T ss_dssp SCSCEEEEESSCCTTTTCEEESSTTSHHHHHHHHTTT------CSCEEEEECCTTCEEEEEEEEEE--TTEEEEEEEEET
T ss_pred cCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhc------CCcEEEEeCCCCCceeeEEEEEE--CCEEEEEEEEEe
Confidence 9999999999999999999999999999998876432 47899999999977977 55555 345433322 11
Q ss_pred e--eeeecCce-----eeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCc-cce
Q 009903 298 C--SIQRRNQK-----LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEH-PVT 369 (523)
Q Consensus 298 ~--~~~~~~~~-----~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~-~~~ 369 (523)
. .+.....+ ....+|+. ++++..+++.+++.+++++||+.|++++||+++ +|++||+|||||+|++. .+.
T Consensus 256 ~~~~~~d~~~ky~~g~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~-~g~~~vlEiN~rpg~t~~s~~ 333 (367)
T 2pvp_A 256 NKQEFLDFKQKYLDFSRNKAPKAS-LSNALEEQLKENFKKLYSDLFDGAIIRCDFFVI-ENEVYLNEINPIPGSLANYLF 333 (367)
T ss_dssp TTTEEECCCCSSCCSCCCSCCCCC-CCHHHHHHHHHHHHHHHTTTSTTCCEEEEEEEE-TTEEEEEEEESSCGGGGGGGS
T ss_pred cCCceEcccccccCCCeeEEecCC-CCHHHHHHHHHHHHHHHHHcCCCCEEEEEEEEE-CCeEEEEEEeCCCCCCccccc
Confidence 0 11111111 11345665 899999999999999999999999999999999 77899999999997642 222
Q ss_pred eeecCCCHHHHHHHHHcCCCC
Q 009903 370 EMISSVDLIEEQIHVAMGGKL 390 (523)
Q Consensus 370 ~~~~Gidl~~~~~~~~~G~~~ 390 (523)
. |+.+++.+++.+.++
T Consensus 334 p-----~~~~l~~~li~~~~~ 349 (367)
T 2pvp_A 334 D-----DFKTTLENLAQSLPK 349 (367)
T ss_dssp S-----SHHHHHHHHHHHCC-
T ss_pred C-----CHHHHHHHHHhCccc
Confidence 2 888888888877554
No 54
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=99.97 E-value=9.4e-31 Score=258.10 Aligned_cols=272 Identities=21% Similarity=0.306 Sum_probs=196.3
Q ss_pred EEEEcC--cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCC-EEEeC
Q 009903 74 ILVANR--GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCT-MLHPG 150 (523)
Q Consensus 74 ILi~g~--g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id-~Vi~~ 150 (523)
|+|++. +..+..++++|+++|+++++++.+... ..+++. . ....++| ++++.
T Consensus 2 I~il~~~~~~~~~~~~~a~~~~G~~v~~~~~~~~~----~~~~~~------------~---------~~~~~~d~~~~~~ 56 (280)
T 1uc8_A 2 LAILYDRIRPDERMLFERAEALGLPYKKVYVPALP----MVLGER------------P---------KELEGVTVALERC 56 (280)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTCCEEEEEGGGCC----EETTBC------------C---------GGGTTCCEEEECC
T ss_pred EEEEecCCCHHHHHHHHHHHHcCCcEEEEehhhce----eeccCC------------C---------cccCCCCEEEECC
Confidence 788875 567889999999999999999754332 112211 1 1124689 77776
Q ss_pred CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeCC
Q 009903 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (523)
Q Consensus 151 ~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~~ 230 (523)
++.. +...+++.++.+|++++ ++++++..+.||..++++|+++|+|+|++ ..+.+.+++.+++++++||+|+||..
T Consensus 57 ~~~~-~~~~~~~~l~~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gi~~p~~--~~~~~~~~~~~~~~~~~~p~vvKp~~ 132 (280)
T 1uc8_A 57 VSQS-RGLAAARYLTALGIPVV-NRPEVIEACGDKWATSVALAKAGLPQPKT--ALATDREEALRLMEAFGYPVVLKPVI 132 (280)
T ss_dssp SSHH-HHHHHHHHHHHTTCCEE-SCHHHHHHHHBHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHCSSEEEECSB
T ss_pred ccch-hhHHHHHHHHHCCCcee-CCHHHHHHhCCHHHHHHHHHHcCcCCCCe--EeeCCHHHHHHHHHHhCCCEEEEECC
Confidence 5422 45677788999999987 56999999999999999999999999999 77899999999999999999999999
Q ss_pred CCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCC-CcEEEEEEEEeCCCcEEEEeeecee-eeecCceee
Q 009903 231 GGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN-PRHIEFQVLADKYGNVVHFGERDCS-IQRRNQKLL 308 (523)
Q Consensus 231 g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G-~~e~sv~v~~d~~g~v~~~~~~~~~-~~~~~~~~~ 308 (523)
|++|+||+++++.+++.++++.+... .......+++||||+| ..++++.++ +|+++....+... +........
T Consensus 133 g~~~~gv~~v~~~~el~~~~~~~~~~--~~~~~~~~lvqe~i~~~~~e~~v~v~---~~~~~~~~~~~~~~~~~~~~~g~ 207 (280)
T 1uc8_A 133 GSWGRLLAXXXXXXXXXXXXXXKEVL--GGFQHQLFYIQEYVEKPGRDIRVFVV---GERAIAAIYRRSAHWITNTARGG 207 (280)
T ss_dssp CCBCSHHHHHHHHHC--------------CTTTTCEEEEECCCCSSCCEEEEEE---TTEEEEEEEC-------------
T ss_pred CCCcccceecccccccchhhhhHhhh--cccCCCcEEEEeccCCCCceEEEEEE---CCEEEEEEEEecCCccccccCCc
Confidence 99999999999999999888765111 1112478999999997 466666655 2354433222100 100000011
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcCC
Q 009903 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (523)
Q Consensus 309 ~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G~ 388 (523)
...|.. +++ ++.+.+.++++++|+ |++++||+++++| ++++|||||++++. +..++|+|+.+++++.++|.
T Consensus 208 ~~~p~~-l~~----~~~~~~~~~~~~lg~-g~~~vD~~~~~~g-~~~iEiN~r~g~~~--~~~~~G~~~~~~~~~~~~~~ 278 (280)
T 1uc8_A 208 QAENCP-LTE----EVARLSVKAAEAVGG-GVVAVDLFESERG-LLVNEVNHTMEFKN--SVHTTGVDIPGEILKYAWSL 278 (280)
T ss_dssp -CEECC-CCH----HHHHHHHHHHHHTTC-SEEEEEEEEETTE-EEEEEEETTCCCTT--HHHHHCCCHHHHHHHHHHHT
T ss_pred cccCCC-CCH----HHHHHHHHHHHHhCC-CeEEEEEEEeCCC-eEEEEEeCCCCccc--hheeeccCHHHHHHHHHHhh
Confidence 122332 443 788999999999999 9999999999888 99999999996543 56779999999999998875
No 55
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=99.97 E-value=4.5e-29 Score=252.64 Aligned_cols=264 Identities=16% Similarity=0.192 Sum_probs=184.0
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCC-CccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD-ALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~-~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
|+++|+|+|+| ++..++++++++|+++++++.+.+.. .....++++.+.++ .+.+ +. +++ .+|+|+
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~d-~~---l~~--~~d~i~ 67 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDEGFETIAFGSSKVKPLYTKYFPVADYFIEE------KYPE-EE---LLN--LNAVVV 67 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHTTCCEEEESCGGGHHHHHTTSCCCSEEECS------SCCH-HH---HHH--TTEEEC
T ss_pred CceEEEEECCh-hHHHHHHHHHhCCCEEEEEECCCCCcccccccccCceEecC------CcCh-HH---hcc--cCCEEE
Confidence 45689999999 89999999999999999996443211 11345667766542 1222 22 222 357777
Q ss_pred eCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEe
Q 009903 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKA 228 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP 228 (523)
+..+.. .....+.++..|++++ ++++++..+.||..++++|+++|||+|++ +.+.+ +++||+||||
T Consensus 68 ~~~e~~--~~~~~~~le~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gip~p~~----~~~~~-------~l~~P~vvKP 133 (334)
T 2r85_A 68 PTGSFV--AHLGIELVENMKVPYF-GNKRVLRWESDRNLERKWLKKAGIRVPEV----YEDPD-------DIEKPVIVKP 133 (334)
T ss_dssp CCTTHH--HHHCHHHHHTCCSCBB-SCTTHHHHHHSHHHHHHHHHHTTCCCCCB----CSCGG-------GCCSCEEEEE
T ss_pred ECcchh--hhhHHHHHHHcCCCcc-CCHHHHHHHHhHHHHHHHHHHcCCCCCCc----cCChH-------HcCCCEEEEe
Confidence 653211 1122345688999976 56799999999999999999999999997 34443 3579999999
Q ss_pred CCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhc-CCCcEEEeeccCCCcEEEEEEEEeCCCc-EEEEeee-ceeee----
Q 009903 229 TAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAF-GNDGVYLEKYVQNPRHIEFQVLADKYGN-VVHFGER-DCSIQ---- 301 (523)
Q Consensus 229 ~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~-~~~~~lvEefI~G~~e~sv~v~~d~~g~-v~~~~~~-~~~~~---- 301 (523)
..|+||+||+++++.+|+..+++.+.... .+ ....+||||||+| .++++.++.+..+. +..+... +....
T Consensus 134 ~~g~~s~Gv~~v~~~~el~~~~~~~~~~~--~~~~~~~~lvee~i~G-~e~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~ 210 (334)
T 2r85_A 134 HGAKGGKGYFLAKDPEDFWRKAEKFLGIK--RKEDLKNIQIQEYVLG-VPVYPHYFYSKVREELELMSIDRRYESNVDAI 210 (334)
T ss_dssp CC----TTCEEESSHHHHHHHHHHHHCCC--SGGGCCSEEEEECCCC-EEEEEEEEEETTTTEEEEEEEEEEEEEEGGGG
T ss_pred CCCCCCCCEEEECCHHHHHHHHHHHHhhc--ccCCCCcEEEEeccCC-ceeEEEEeecCcCceeeeeeeccEEEeccCcc
Confidence 99999999999999999999887764210 00 1368999999999 88887666542212 2211110 00000
Q ss_pred --------------ecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHc-----CCccccEEEEEEeCCCCEEEEEEecCC
Q 009903 302 --------------RRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRI 362 (523)
Q Consensus 302 --------------~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~al-----g~~G~~~vE~~~~~~G~~~liEiNpR~ 362 (523)
......... |.. ++++..+++.+++.+++++| ++.|++|+||+++++|++|++|||||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~g~~-p~~-l~~~~~~~i~~~a~~~~~~l~~~~~~~~G~~~vd~~~~~~g~~~viEiN~R~ 288 (334)
T 2r85_A 211 GRIPAKDQLEFDMDITYTVIGNI-PIV-LRESLLMDVIEAGERVVKAAEELMGGLWGPFCLEGVFTPDLEFVVFEISARI 288 (334)
T ss_dssp GGSCHHHHTTSCCCCCEEEEEEE-ECC-CCGGGHHHHHHHHHHHHHHHHHHSSCCCEEEEEEEEECTTSCEEEEEEECSC
T ss_pred cccccccccccccCCceeeeCCC-Ccc-cCHHHHHHHHHHHHHHHHHHHhhcccccccEEEEEEECCCCCEEEEEEeCCc
Confidence 000011111 654 88888899999999999999 788999999999988889999999999
Q ss_pred CCC
Q 009903 363 QVE 365 (523)
Q Consensus 363 ~g~ 365 (523)
+++
T Consensus 289 g~~ 291 (334)
T 2r85_A 289 VAG 291 (334)
T ss_dssp CGG
T ss_pred CCC
Confidence 985
No 56
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=99.97 E-value=9.5e-29 Score=251.15 Aligned_cols=269 Identities=17% Similarity=0.184 Sum_probs=190.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCC-CccccccCeeEEcCCCCCCCCCCCH--HHHHHHHHHcCCCEE
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD-ALHVKLADESVCIGEAPSSQSYLLI--PNVLSAAISRGCTML 147 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~-~~~~~~ad~~~~~~~~~~~~~~~~~--~~l~~~~~~~~id~V 147 (523)
..+|+++|++ +++.++++|+++|++|++++.+.+.. .....++|+.+.++ .+.|. +.+++.+.+.. +.|
T Consensus 18 ~~~I~ilGs~-l~~~l~~aAk~lG~~vi~vd~~~~~p~~~~~~~ad~~~~~d------~~~d~~~~~~l~~l~~~~-~vV 89 (361)
T 2r7k_A 18 EITIATLGSH-TSLHILKGAKLEGFSTVCITMKGRDVPYKRFKVADKFIYVD------NFSDIKNEEIQEKLRELN-SIV 89 (361)
T ss_dssp SCEEEEESST-THHHHHHHHHHTTCCEEEEECTTSCHHHHHTTCCSEEEECS------SGGGGGSHHHHHHHHHTT-EEE
T ss_pred CCEEEEECcH-HHHHHHHHHHHCCCEEEEEECCCCCCcccccccCceEEECC------CcccccHHHHHHHHHHcC-CEE
Confidence 3569999999 89999999999999999996554321 12567889988763 24342 45555555544 544
Q ss_pred EeCCCcccccH---HHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcE
Q 009903 148 HPGYGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPV 224 (523)
Q Consensus 148 i~~~g~~~e~~---~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~ 224 (523)
.|-. +.. .+.++.++.|++++| +.++++...||...+++|+++|||+|++ +.+.+++ ++|+
T Consensus 90 ~pe~----~~v~~~gl~~l~~~~g~~v~g-~~~a~~~e~~k~~~k~~l~~~GIptp~~----~~~~~e~-------~~Pv 153 (361)
T 2r7k_A 90 VPHG----SFIAYCGLDNVENSFLVPMFG-NRRILRWESERSLEGKLLREAGLRVPKK----YESPEDI-------DGTV 153 (361)
T ss_dssp CCBH----HHHHHHCHHHHHHTCCSCBBS-CGGGGGTTTCHHHHHHHHHHTTCCCCCE----ESSGGGC-------CSCE
T ss_pred EeCc----hhhhHHHHHHHHHHcCCCcCC-CHHHHHHhhhHHHHHHHHHHcCcCCCCE----eCCHHHc-------CCCE
Confidence 4311 221 222334589999886 8899999999999999999999999975 3454443 6999
Q ss_pred EEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcC---CCcEEEeeccCCCcEEEEEEEEeC-CCcEEEE--eeece
Q 009903 225 MIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG---NDGVYLEKYVQNPRHIEFQVLADK-YGNVVHF--GERDC 298 (523)
Q Consensus 225 VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~---~~~~lvEefI~G~~e~sv~v~~d~-~g~v~~~--~~~~~ 298 (523)
||||..+++|+||++++|.+|+.++++.+.... .++ ..+++|||||+| .++++..+..- ++++-.+ ..+-.
T Consensus 154 VVK~~~~a~GkGv~v~~s~ee~~~a~~~~~~~~--~~~~~~~~~viIEEfl~G-~e~s~~~f~~~~~~~~e~~~id~r~~ 230 (361)
T 2r7k_A 154 IVKFPGARGGRGYFIASSTEEFYKKAEDLKKRG--ILTDEDIANAHIEEYVVG-TNFCIHYFYSPLKDEVELLGMDKRYE 230 (361)
T ss_dssp EEECSCCCC---EEEESSHHHHHHHHHHHHHTT--SCCHHHHHHCEEEECCCS-EEEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred EEeeCCCCCCCCEEEECCHHHHHHHHHHHHhcc--ccccCCCCeEEEEeccce-EEeeEEEEecccCCeeEEEEecceEE
Confidence 999999999999999999999999998764321 011 146999999999 88885555432 2222222 22100
Q ss_pred ee-----------------eecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHc------CCccccEEEEEEeCCCCEEE
Q 009903 299 SI-----------------QRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI------GYIGVGTVEFLLDERGSFYF 355 (523)
Q Consensus 299 ~~-----------------~~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~al------g~~G~~~vE~~~~~~G~~~l 355 (523)
.. ........+ .|+. ++++..+++.+++.++++++ |+.|++++||+++++|++++
T Consensus 231 ~~~dgi~~~~~~~~~~~~~~p~~v~~G~-~Pa~-l~~~~~~~a~~~a~~v~~al~~~~~~~~~G~~~vE~fvt~dg~i~V 308 (361)
T 2r7k_A 231 SNIDGLVRIPAKDQLEMNINPSYVITGN-IPVV-IRESLLPQVFEMGDKLVAKAKELVPPGMIGPFCLQSLCNENLELVV 308 (361)
T ss_dssp EEHHHHTTSCHHHHHTCCCCCCEEEEEE-EECC-CCGGGHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEEEECTTSCEEE
T ss_pred eecccceecchhhhhcccCCCceEEecC-cCCc-CCHHHHHHHHHHHHHHHHHHHhhccCCccceEEEEEEEcCCCCEEE
Confidence 00 000111111 2765 88899999999999999999 88899999999998888999
Q ss_pred EEEecCCCCCccc
Q 009903 356 MEMNTRIQVEHPV 368 (523)
Q Consensus 356 iEiNpR~~g~~~~ 368 (523)
+|||||++|+..+
T Consensus 309 ~EIapR~gGg~~~ 321 (361)
T 2r7k_A 309 FEMSARVDGGTNS 321 (361)
T ss_dssp EEEESSBCGGGGG
T ss_pred EEEcCCCCCCccc
Confidence 9999999987433
No 57
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=99.95 E-value=2.8e-28 Score=243.06 Aligned_cols=252 Identities=13% Similarity=0.148 Sum_probs=170.5
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCC-CCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDK-DALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~-~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
|..+|.++|+| ++++++++|+++|++|++++.+.+. ..+...++|+.+.++ .+.| ++ ...|.|+
T Consensus 1 ~~~~I~~lGsg-l~~~~~~aAk~lG~~viv~d~~~~~p~~~a~~~ad~~~~~~------~~~d------l~--~~~dvit 65 (320)
T 2pbz_A 1 MSLIVSTIASH-SSLQILLGAKKEGFKTRLYVSPKRRPFYSSLPIVDDLVVAE------EMTS------IL--NDDGIVV 65 (320)
T ss_dssp ---CEEEESST-THHHHHHHHHHTTCCEEEEECTTTHHHHHTCTTCSEEEECS------CSCC------TT--CCSSBCC
T ss_pred CceEEEEEcCH-hHHHHHHHHHHCCCEEEEEECCCCCccchhhhcCCeEEECC------cHHH------HH--hcCCEEE
Confidence 34579999999 9999999999999999999654331 122678899998764 2333 22 2347766
Q ss_pred eCCCcccccHH--HHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEE
Q 009903 149 PGYGFLAENAV--FVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMI 226 (523)
Q Consensus 149 ~~~g~~~e~~~--~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~Vv 226 (523)
+-. |... ..+.+++.|++++ |+.+++....||...+++|+++|||+|+++ . .+++ +++||+||
T Consensus 66 pe~----e~v~~~~l~~le~~~~p~~-p~~~~l~~~~dr~~~~~~l~~~Gip~P~~~--~---~ee~-----~i~~PviV 130 (320)
T 2pbz_A 66 PHG----SFVAYLGIEAIEKAKARFF-GNRRFLKWETTFELQDKALEGAGIPRVEVV--E---PEDA-----KPDELYFV 130 (320)
T ss_dssp CBT----THHHHSCHHHHHTCCSCCB-SCSSGGGGGSCHHHHHHHHHHHTCCBCCBC--C---SCCC-----CSSCCEEE
T ss_pred ecc----cchhHHHHHHHHHcCCCcC-CCHHHHHHHHhHHHHHHHHHHCCcCCCCee--C---HhHc-----CcCCcEEE
Confidence 433 3221 2244678899976 678999999999999999999999999983 2 2222 58999999
Q ss_pred EeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEe-CCCcEEEEeeeceeeeecCc
Q 009903 227 KATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLAD-KYGNVVHFGERDCSIQRRNQ 305 (523)
Q Consensus 227 KP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d-~~g~v~~~~~~~~~~~~~~~ 305 (523)
||..|+||+|+++++| +|+..+++.+ . .++||||||+| .+++..++.+ -.|++..+............
T Consensus 131 Kp~~g~ggkG~~~v~~-eel~~~~~~~--------~-~~~IiEEfI~g-~~~~~~~f~~~~~g~~e~~~~~~r~e~~~g~ 199 (320)
T 2pbz_A 131 RIEGPRGGSGHFIVEG-SELEERLSTL--------E-EPYRVERFIPG-VYLYVHFFYSPILERLELLGVDERVLIADGN 199 (320)
T ss_dssp ECC------------C-EECSCCCC-------------CCEEEECCCS-CEEEEEEEEETTTTEEEEEEEEEEEETTCSS
T ss_pred EECCCCCCCCEEEECh-HHHHHHHHhc--------C-CCEEEEeeece-EecceeEEeccccCceeEEEecceEEEECCe
Confidence 9999999999999999 9998766543 1 47999999999 6667666654 34455554333211111111
Q ss_pred e----------eeEecCCCCCCHHHHHHHHHHHHHHHHHc------CCccccEEEEEEeCCCCEEEEEEecCCCCC
Q 009903 306 K----------LLEEAPSPALTPELRKAMGDAAVAAAASI------GYIGVGTVEFLLDERGSFYFMEMNTRIQVE 365 (523)
Q Consensus 306 ~----------~~~~~p~~~l~~~~~~~l~~~a~~~~~al------g~~G~~~vE~~~~~~G~~~liEiNpR~~g~ 365 (523)
. .....|+. +++...+++.+++.+++++| |+.|++++| ++++|+++++|||||++|+
T Consensus 200 ~~~p~~~~~~~~~G~~P~~-~~~~~~~~a~~~a~~i~~~L~~l~~~g~~G~~~vE--~~~dg~~~v~EIapR~~GG 272 (320)
T 2pbz_A 200 ARWPVKPLPYTIVGNRAIA-LRESLLPQLYDYGLAFVRTMRELEPPGVIGPFALH--FAYDGSFKAIGIASRIDGG 272 (320)
T ss_dssp SSSCCSCCCCCEEEEEECE-ECGGGHHHHHHHHHHHHHHHHHHSTTCCCSEEEEE--EECSSSCEEEEEESSBCSG
T ss_pred eecccCCCceeeecCCCCc-cCHHHHHHHHHHHHHHHHHHHhhccCCceeeEEEE--EcCCCcEEEEEecCCCCCC
Confidence 0 11112554 77888899999999999999 999999999 6777789999999998886
No 58
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus}
Probab=99.94 E-value=3.7e-26 Score=228.27 Aligned_cols=209 Identities=13% Similarity=0.150 Sum_probs=160.8
Q ss_pred HHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHH
Q 009903 133 PNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTE 211 (523)
Q Consensus 133 ~~l~~~~~~~~id~Vi~~-~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~ 211 (523)
+.+.++++ ++|.+++. .+.......+.+.++..| +++|+++++++.+.||..+++++++ |+|+|++ ..
T Consensus 61 ~~l~~~~~--~~D~~~~i~~~ed~~l~~~~~~l~~~g-~~~g~~~~~~~~~~dK~~~~~~l~~-Gip~p~~--~~----- 129 (305)
T 3df7_A 61 DSMEKYLE--KSDAFLIIAPEDDFLLYTLTKKAEKYC-ENLGSSSRAIAVTSDKWELYKKLRG-EVQVPQT--SL----- 129 (305)
T ss_dssp GGHHHHHT--TCSEEEEECCCGGGHHHHHHHHHHTTS-EESSCCHHHHHHHTSHHHHHHHHTT-TSCCCCE--ES-----
T ss_pred HHHHHHHH--hcCEEEEEccCCcHHHHHHHHHHHhcC-CccCCCHHHHHHhcCHHHHHHHHHh-CCCCCCE--ec-----
Confidence 45666664 57876654 332111234555666666 6889999999999999999999999 9999998 32
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEE
Q 009903 212 EAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVV 291 (523)
Q Consensus 212 e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~ 291 (523)
++++||+|+||..|+||+||+++++ .+..+++||||+| .|+++.++.+ + .+.
T Consensus 130 ------~~~~~P~vvKP~~g~gs~Gv~~v~~-------------------~~~~~lvEe~I~G-~e~sv~v~~g-~-~~~ 181 (305)
T 3df7_A 130 ------RPLDCKFIIKPRTACAGEGIGFSDE-------------------VPDGHIAQEFIEG-INLSVSLAVG-E-DVK 181 (305)
T ss_dssp ------SCCSSSEEEEESSCC----CBCCSS-------------------CCTTEEEEECCCS-EEEEEEEEES-S-SEE
T ss_pred ------ccCCCCEEEEeCCCCCCCCEEEEec-------------------CCCCEEEEeccCC-cEEEEEEEeC-C-eEE
Confidence 3679999999999999999999988 1478999999999 9999999974 3 454
Q ss_pred EEeeeceeeeecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHc-CCccccEEEEEEeCCCCEEEEEEecCCCCCcccee
Q 009903 292 HFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI-GYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTE 370 (523)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~al-g~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~ 370 (523)
.+..... ............|.. ++++..+++.+++.+++++| |+.|++++||+++ |++|++|||||++++...+.
T Consensus 182 ~~~~~~~-~~~~~~~~g~~~p~~-l~~~~~~~i~~~a~~~~~~l~g~~G~~~vD~~~~--~~~~viEiNpR~~~~~~~~~ 257 (305)
T 3df7_A 182 CLSVNEQ-IINNFRYAGAVVPAR-ISDEVKREVVEEAVRAVECVEGLNGYVGVDIVYS--DQPYVIEINARLTTPVVAFS 257 (305)
T ss_dssp EEEEEEE-EEETTEEEEEEESCC-CCHHHHHHHHHHHHHHHTTSTTCCEEEEEEEEES--SSEEEEEEESSCCGGGGGHH
T ss_pred EEEEeeE-eccCceeccccccCC-CCHHHHHHHHHHHHHHHHHcCCCcCceEEEEEEC--CCEEEEEEcCCCCCCHHHHH
Confidence 4443221 111122334456765 89999999999999999999 9999999999996 55999999999998877677
Q ss_pred eecCCCHHHHHHHH
Q 009903 371 MISSVDLIEEQIHV 384 (523)
Q Consensus 371 ~~~Gidl~~~~~~~ 384 (523)
.++|+|+.++++++
T Consensus 258 ~~~G~~~~~~~~~~ 271 (305)
T 3df7_A 258 RAYGASVADLLAGG 271 (305)
T ss_dssp HHHSCCHHHHHTTC
T ss_pred HHHCCCHHHHHHhc
Confidence 88999999999988
No 59
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=99.91 E-value=7.6e-24 Score=212.17 Aligned_cols=287 Identities=13% Similarity=0.040 Sum_probs=185.0
Q ss_pred cEEEEEcCc--------HHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCe-eEEcCCCCCCCCCCC--HHHHHHHHH
Q 009903 72 EKILVANRG--------EIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADE-SVCIGEAPSSQSYLL--IPNVLSAAI 140 (523)
Q Consensus 72 k~ILi~g~g--------~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~-~~~~~~~~~~~~~~~--~~~l~~~~~ 140 (523)
++|+|+..+ .++..++++++++|+++++++.+..........++. .+.+. ...+.+.. .+.+..
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--- 76 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLINGEARAHTRTLNVK--QNYEEWFSFVGEQDLP--- 76 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGGEEEETTEEEEEEEEEEEC--SCSSCCEEEEEEEEEE---
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchhHeEEECCeEEEEEeeeEec--cCcccceeccCccccc---
Confidence 468888766 357889999999999999996532211111111111 11111 00001000 000011
Q ss_pred HcCCCEEEeCCCccc-c-c---HHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHH
Q 009903 141 SRGCTMLHPGYGFLA-E-N---AVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVK 215 (523)
Q Consensus 141 ~~~id~Vi~~~g~~~-e-~---~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~ 215 (523)
..++|+|++..+... + . ..+.+.++..|++++ ++++++..+.||..++++++ |+|++ ..+.+.+++.+
T Consensus 77 ~~~~d~v~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~dK~~~~~~l~----~~P~t--~~~~~~~~~~~ 149 (316)
T 1gsa_A 77 LADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIV-NKPQSLRDCNEKLFTAWFSD----LTPET--LVTRNKAQLKA 149 (316)
T ss_dssp GGGSSEEEECCCCCCCHHHHHHHHHHHHHHHTTCEEE-SCHHHHHHCCTTGGGGGGTT----TSCCE--EEESCHHHHHH
T ss_pred cccCCEEEEecCCCCchhhHHHHHHHHHHHHcCCeEe-cCHHHHHhhhhHHHHHhhhh----cCCCe--EEeCCHHHHHH
Confidence 135899998653211 1 1 245566778899876 78999999999999999987 99999 77889999999
Q ss_pred HHHhcCCcEEEEeCCCCCCCceEEeC-CHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEE-E
Q 009903 216 LADELGFPVMIKATAGGGGRGMRLAK-EPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVH-F 293 (523)
Q Consensus 216 ~~~~~g~P~VvKP~~g~gs~Gv~~v~-~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~-~ 293 (523)
++++++ |+|+||..|++|+||++++ +.+++..+++.+.. .+...+|+||||+|..++++.++.. +|+++. .
T Consensus 150 ~~~~~~-p~vvKP~~g~~g~Gv~~v~~~~~~l~~~~~~~~~-----~~~~~~lvqe~i~~~~~~~~~v~~~-~g~~~~~~ 222 (316)
T 1gsa_A 150 FWEKHS-DIILKPLDGMGGASIFRVKEGDPNLGVIAETLTE-----HGTRYCMAQNYLPAIKDGDKRVLVV-DGEPVPYC 222 (316)
T ss_dssp HHHHHS-SEEEECSSCCTTTTCEEECTTCTTHHHHHHHHTT-----TTTSCEEEEECCGGGGGCEEEEEEE-TTEECSEE
T ss_pred HHHHcC-CEEEEECCCCCcccEEEecCChHHHHHHHHHHHh-----cCCceEEEecccCCCCCCCEEEEEE-CCEEeeeE
Confidence 999999 9999999999999999998 88898887765421 1236899999999822445555543 345554 2
Q ss_pred eeecee--eeecCc-eeeEecCCCCCCHHHHHHHHHHHHHHH---HHcCCccccEEEEEEeCCCCEEEEEEecCCCCCcc
Q 009903 294 GERDCS--IQRRNQ-KLLEEAPSPALTPELRKAMGDAAVAAA---ASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHP 367 (523)
Q Consensus 294 ~~~~~~--~~~~~~-~~~~~~p~~~l~~~~~~~l~~~a~~~~---~alg~~G~~~vE~~~~~~G~~~liEiNpR~~g~~~ 367 (523)
..+... ....+. ......|.. ++++ +.+++.+++ +++|+ +++++||+ | +||||||+|.+++..
T Consensus 223 ~~r~~~~~~~~~~~~~gg~~~~~~-~~~~----~~~~a~~~~~~l~~~g~-~~~~vD~~----g-~~~iEvN~r~~~~~~ 291 (316)
T 1gsa_A 223 LARIPQGGETRGNLAAGGRGEPRP-LTES----DWKIARQIGPTLKEKGL-IFVGLDII----G-DRLTEINVTSPTCIR 291 (316)
T ss_dssp EEEECCSSCSCCCGGGTCEEEEEE-CCHH----HHHHHHHHHHHHHHTTC-CEEEEEEE----T-TEEEEEECSSCCCHH
T ss_pred EEEeCCCCCceeEEccCCccccCC-CCHH----HHHHHHHHHHHHHhCCC-cEEEEEec----C-CEEEEEcCCCCcchH
Confidence 221100 001110 011112332 4543 334445444 45687 68889998 6 589999999655655
Q ss_pred ceeeecCCCHHHHHHHHHcCC
Q 009903 368 VTEMISSVDLIEEQIHVAMGG 388 (523)
Q Consensus 368 ~~~~~~Gidl~~~~~~~~~G~ 388 (523)
.++..+|+|+.+.+++.+.+.
T Consensus 292 ~~~~~~g~~~~~~~~~~~~~~ 312 (316)
T 1gsa_A 292 EIEAEFPVSITGMLMDAIEAR 312 (316)
T ss_dssp HHHHHSSCCHHHHHHHHHHHH
T ss_pred HHHHhhCcCHHHHHHHHHHHH
Confidence 666779999999999887653
No 60
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*
Probab=99.88 E-value=4.6e-22 Score=200.41 Aligned_cols=241 Identities=12% Similarity=0.128 Sum_probs=165.9
Q ss_pred cEEEEEcCc-HHHHHHHHHHHHcCCcE--EEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 72 EKILVANRG-EIAVRVIRTAHEMGIPC--VAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 72 k~ILi~g~g-~~~~~vi~aa~~~G~~v--i~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
++|+|+... .....++++|+++|+++ +.++.+.. +. ... ..+|+|+
T Consensus 12 m~i~il~~~~~~s~~l~~al~~~G~~v~~~~~d~~~~--------------~~-------~~~----------~~~d~v~ 60 (324)
T 1z2n_X 12 VSLFIWLPESKQKTLFISTKNHTQFELNNIIFDVTLS--------------TE-------LPD----------KEPNAII 60 (324)
T ss_dssp EEEEEECCHHHHHHHBSSCCSEEEEEETTEEEEEEEE--------------SS-------CCS----------SCCSEEE
T ss_pred EEEEEEEchhhhhhhHHHHHHhcCcEEEEEEecCCCC--------------cc-------ccC----------CCceEEE
Confidence 578888752 22237888999999999 88864210 00 000 1578888
Q ss_pred eCCCccc-ccHHHHHHHHH--cCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhc--CCc
Q 009903 149 PGYGFLA-ENAVFVEMCRE--HGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADEL--GFP 223 (523)
Q Consensus 149 ~~~g~~~-e~~~~a~~~~~--~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~--g~P 223 (523)
+...... +.....+.++. .|++++ ++++++..+.||..++++|+++|+|+|++ ..+.+.+++.+++++. +||
T Consensus 61 ~~~~~~~~~~~~~l~~~~~~~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gi~~P~~--~~~~~~~~~~~~~~~~~~~~P 137 (324)
T 1z2n_X 61 TKRTHPVGKMADEMRKYEKDHPKVLFL-ESSAIHDMMSSREEINALLIKNNIPIPNS--FSVKSKEEVIQLLQSKQLILP 137 (324)
T ss_dssp ECCSCSSSHHHHHHHHHHHHCTTSEEE-TCHHHHHHHTBHHHHHHHHHHTTCCCSCE--EEESSHHHHHHHHHTTCSCSS
T ss_pred EeccchHHHHHHHHHHHHHhCCCCeEe-CCHHHHHHHhCHHHHHHHHHHCCCCCCCE--EEeCCHHHHHHHHHHcCCCCC
Confidence 7642211 11222233333 788864 89999999999999999999999999999 7788999998888875 499
Q ss_pred EEEEeCCCCCC---CceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCC-CcEEEEEEEEeCCCcEEEEeeecee
Q 009903 224 VMIKATAGGGG---RGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN-PRHIEFQVLADKYGNVVHFGERDCS 299 (523)
Q Consensus 224 ~VvKP~~g~gs---~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G-~~e~sv~v~~d~~g~v~~~~~~~~~ 299 (523)
+|+||..|.|| .|+.++++.+++.. ....+++|+||++ ..++++.++ .++++....+...
T Consensus 138 ~vvKP~~g~g~~~s~gv~~v~~~~~l~~-------------~~~~~lvqe~i~~~g~~~~v~v~---g~~~~~~~~~~~~ 201 (324)
T 1z2n_X 138 FIVKPENAQGTFNAHQMKIVLEQEGIDD-------------IHFPCLCQHYINHNNKIVKVFCI---GNTLKWQTRTSLP 201 (324)
T ss_dssp EEEEESBCSSSSGGGEEEEECSGGGGTT-------------CCSSEEEEECCCCTTCEEEEEEE---TTEEEEEEECCCC
T ss_pred EEEeeCCCCCCccceeeEEEeCHHHHhh-------------cCCCEEEEEccCCCCcEEEEEEE---CCEEEEEEecCcc
Confidence 99999999988 99999999888652 1478999999986 366666555 2354444221110
Q ss_pred e-----------eec-------------------------CceeeEecCCCCCCHHHH-HHHHHHHHHHHHHcCCccccE
Q 009903 300 I-----------QRR-------------------------NQKLLEEAPSPALTPELR-KAMGDAAVAAAASIGYIGVGT 342 (523)
Q Consensus 300 ~-----------~~~-------------------------~~~~~~~~p~~~l~~~~~-~~l~~~a~~~~~alg~~G~~~ 342 (523)
. ... ........+. .+.... +++.+.+.+++++||+. +++
T Consensus 202 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~a~~~~~~lg~~-~~~ 278 (324)
T 1z2n_X 202 NVHRCGIKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFGSKILEDPI--LLNLTSEAEMRDLAYKVRCALGVQ-LCG 278 (324)
T ss_dssp CCCCSSCCEEEEETTBGGGGGGSCTTSSCHHHHHHHHTTTTCCCBCSCTT--TTTSCCHHHHHHHHHHHHHHHTCS-EEE
T ss_pred cccCCCccceeeccccchhhhccccccccccccccccccchhhccccCCc--cccCCCHHHHHHHHHHHHHHhCCc-EEe
Confidence 0 000 0000000111 111222 68899999999999995 889
Q ss_pred EEEEEe-CCCCEEEEEEecCCCCC
Q 009903 343 VEFLLD-ERGSFYFMEMNTRIQVE 365 (523)
Q Consensus 343 vE~~~~-~~G~~~liEiNpR~~g~ 365 (523)
+||+++ ++|++||||||+|++.+
T Consensus 279 vD~~~~~~~g~~~vlEvN~~Pg~~ 302 (324)
T 1z2n_X 279 IDFIKENEQGNPLVVDVNVFPSYG 302 (324)
T ss_dssp EEEECGGGCSSCEEEEEEESCCTT
T ss_pred eEEEEEcCCCCEEEEEEcCCCCcC
Confidence 999998 56899999999999654
No 61
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=99.84 E-value=1.8e-21 Score=213.83 Aligned_cols=244 Identities=19% Similarity=0.162 Sum_probs=179.8
Q ss_pred CCHHHHHHHHHHcCCCEEEeCCCc-ccccHHHHHHHHH--cCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCcc
Q 009903 130 LLIPNVLSAAISRGCTMLHPGYGF-LAENAVFVEMCRE--HGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGL 206 (523)
Q Consensus 130 ~~~~~l~~~~~~~~id~Vi~~~g~-~~e~~~~a~~~~~--~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~ 206 (523)
.+.+.|++.|++.++|+++.+.+. +... ...+.++. .|+.+.+++..++..++||..++++|+++|||+|++ ..
T Consensus 433 ~st~~Iv~~A~~~gid~~vlg~e~~l~~l-g~~~~~~~ig~~~~t~~~s~~aa~~~~DK~~tk~lL~~~GIPvP~~--~~ 509 (757)
T 3ln7_A 433 LSTQALLFDVIQKGIHTEILDENDQFLCL-KYGDHIEYVKNGNMTSHDSYISPLIMENKVVTKKVLQKAGFNVPQS--VE 509 (757)
T ss_dssp HHHHHHHHHHHHHTCEEEEEETTTTEEEE-EETTEEEEEETTTBCSSSBSHHHHHHHHSHHHHHHHHHHTCCCCCE--EE
T ss_pred CCHHHHHHHHHHhCCCEEEECCCHHHHHh-cccccceeeccCccCCCCHHHHHHHhcCHHHHHHHHHHCCcCCCCE--EE
Confidence 357899999999999999876421 1100 00111121 245556788899999999999999999999999999 78
Q ss_pred CCCHHHHHHHH-HhcCCcEEEEeCCCCCCCceEEe----CCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEE
Q 009903 207 LQSTEEAVKLA-DELGFPVMIKATAGGGGRGMRLA----KEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQ 281 (523)
Q Consensus 207 ~~s~~e~~~~~-~~~g~P~VvKP~~g~gs~Gv~~v----~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~ 281 (523)
+.+.+++.+++ +++|||+||||..|++|+||.++ ++.+++.++++.+... +..++|||||+| +|+++.
T Consensus 510 ~~~~~ea~~~~~~~~g~PvVVKP~~g~~G~GV~iv~~~v~~~eel~~al~~a~~~------~~~vlVEefI~G-~Ei~v~ 582 (757)
T 3ln7_A 510 FTSLEKAVASYALFENRAVVIKPKSTNYGLGITIFQQGVQNREDFAKALEIAFRE------DKEVMVEDYLVG-TEYRFF 582 (757)
T ss_dssp ESCHHHHHHGGGGSSSSCEEEEESSCSTTTTCEECSSCCCCHHHHHHHHHHHHHH------CSSEEEEECCCS-EEEEEE
T ss_pred ECCHHHHHHHHHHhcCCCEEEEeCCCCCCCCeEEecCCCCCHHHHHHHHHHHHhc------CCcEEEEEcCCC-cEEEEE
Confidence 89999987776 78999999999999999999999 8999999999876543 478999999999 999999
Q ss_pred EEEeCCCcEEEEeeeceee----------------------eecCce---------------------------------
Q 009903 282 VLADKYGNVVHFGERDCSI----------------------QRRNQK--------------------------------- 306 (523)
Q Consensus 282 v~~d~~g~v~~~~~~~~~~----------------------~~~~~~--------------------------------- 306 (523)
++. |+++....+.... ...+..
T Consensus 583 Vlg---gkvvaai~R~p~~VvGDG~~ti~eLi~~~n~~p~rg~~~~~~l~~I~ld~~~~~~L~~~g~~~d~Vp~~Ge~v~ 659 (757)
T 3ln7_A 583 VLG---DETLAVLLRVPANVVGDSVHSVAELVAMKNDHPLRGDGSRTPLKKIALGEIEQLQLKEQGLTIDSIPAKDQLVQ 659 (757)
T ss_dssp EET---TEEEEEEEECCSEEEGGGCCCHHHHHHHHHTSTTEECSSSSSEECCCCCHHHHHHHHHHTCCSSSCCCSSCEEE
T ss_pred EEC---CEEEEEEEEecccccCCCcccHHHHHHhhcccccccccccCccccccccHHHHHHHHHcCCCccccCCCCCEEE
Confidence 883 4777665543210 000000
Q ss_pred ------eeEecCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeC--------CCCEEEEEEecCCCCC-ccceee
Q 009903 307 ------LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE--------RGSFYFMEMNTRIQVE-HPVTEM 371 (523)
Q Consensus 307 ------~~~~~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~--------~G~~~liEiNpR~~g~-~~~~~~ 371 (523)
...+..+...+++...++.+.|.++++++|+ .+++||++.++ .+.+.|||||++++-. +.....
T Consensus 660 L~~~~Nls~GG~~~dvtd~i~p~~~~~a~~aa~~lGl-~~~GvDli~~di~~p~~~~~~~~~iiEvN~~P~~~~h~~p~~ 738 (757)
T 3ln7_A 660 LRANSNISTGGDSIDMTDEMHESYKQLAVGITKAMGA-AVCGVDLIIPDLKQPATPNLTSWGVIEANFNPMMMMHIFPYA 738 (757)
T ss_dssp CCSSCCGGGTCCEEECTTTSCHHHHHHHHHHHHHHTC-SEEEEEEEESCSSSCCCSSTTTCEEEEEESSCCHHHHHSCSS
T ss_pred eecccccccCccceeccccCCHHHHHHHHHHHHHhCC-CEEEEEEEecCccccccccCCCeEEEEEcCCcchhhhhcccc
Confidence 0000011124445566778999999999999 59999999883 2358999999999533 223335
Q ss_pred ecCCCHHHHHHHHHcC
Q 009903 372 ISSVDLIEEQIHVAMG 387 (523)
Q Consensus 372 ~~Gidl~~~~~~~~~G 387 (523)
.+|.|+.+.+++.+..
T Consensus 739 g~~~~v~~~ii~~lfp 754 (757)
T 3ln7_A 739 GKSRRLTQNVIKMLFP 754 (757)
T ss_dssp SCCCCCHHHHHHHHCT
T ss_pred CCCCchHHHHHHHhcC
Confidence 6899999999998764
No 62
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=99.83 E-value=1e-19 Score=200.48 Aligned_cols=198 Identities=17% Similarity=0.232 Sum_probs=150.5
Q ss_pred HHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHH-HhcCCcEEEEeCCCCCCCceEEeC---CHHHHHHHHH
Q 009903 176 PDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLA-DELGFPVMIKATAGGGGRGMRLAK---EPDEFVKLLQ 251 (523)
Q Consensus 176 ~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~-~~~g~P~VvKP~~g~gs~Gv~~v~---~~~el~~~~~ 251 (523)
..++..++||..++++|+++|||+|++ ..+.+.+++.+++ +.+|||+||||..|++|+||.+++ +.+++.++++
T Consensus 476 ~~a~~~~~DK~~tk~lL~~~GIPvP~~--~~~~~~~ea~~~~~~~~g~PvVVKP~~G~~G~GV~iv~~~~s~eel~~a~~ 553 (750)
T 3ln6_A 476 YIVPLAMANKVVTKKILDEKHFPTPFG--DEFTDRKEALNYFSQIQDKPIVVKPKSTNFGLGISIFKTSANLASYEKAID 553 (750)
T ss_dssp THHHHHTTTSHHHHHHHHHTTCCCCCC--CCEETTTTHHHHHHHSSSSCEEEEETTCCSSSSCEEESSCCCHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHCCcCCCCE--EEECCHHHHHHHHHHhcCCcEEEEeCCCCCCCCEEEEeCCCCHHHHHHHHH
Confidence 456777789999999999999999999 7788888887777 678999999999999999999998 9999999998
Q ss_pred HHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcEEEEeeeceeee--------------------e--cCceee-
Q 009903 252 QAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQ--------------------R--RNQKLL- 308 (523)
Q Consensus 252 ~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v~~~~~~~~~~~--------------------~--~~~~~~- 308 (523)
.+... +..+||||||+| +|+++.++. |+++....+..... + .+....
T Consensus 554 ~~~~~------~~~vlVEefI~G-~E~~v~Vvg---g~vvaa~~r~p~~v~GdG~~tI~eLI~~~n~dp~rg~~~~~~l~ 623 (750)
T 3ln6_A 554 IAFTE------DSAILVEEYIEG-TEYRFFVLE---GDCIAVLLRVAANVVGDGIHTISQLVKLKNQNPLRGYDHRSPLE 623 (750)
T ss_dssp HHHHH------CSEEEEEECCCS-EEEEEEEET---TEEEEEEEEECCEEECCTTCCHHHHHHHHTTCTTEESSSCCSEE
T ss_pred HHHhh------CCcEEEEeccCC-CEEEEEEEC---CEEEEEEEEecceEecCCccCHHHHHHhhccCccccccccCccc
Confidence 87643 478999999999 999999883 36665544322110 0 000000
Q ss_pred -------------------Ee-------------------cCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeC-
Q 009903 309 -------------------EE-------------------APSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE- 349 (523)
Q Consensus 309 -------------------~~-------------------~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~- 349 (523)
.. ..+...+++...++.+.|.++++++|+. +++||++.++
T Consensus 624 ~i~~d~~~~~~l~~~g~~~~~V~~~Ge~v~L~~~~Nls~Gg~~~d~td~i~p~~~~~a~~aa~~igl~-~~GvDli~~di 702 (750)
T 3ln6_A 624 VIELGEVEQLMLEQQGYTVNSIPPEGTKIELRRNSNISTGGDSIDVTNTMDPTYKQLAAEMAEAMGAW-VCGVDLIIPNA 702 (750)
T ss_dssp CCCCCHHHHHHHHHTTCCSSCCCCTTCEEESCSSCCTTTTCEEEECTTTSCHHHHHHHHHHHHHHTCS-SCEEEEEESCS
T ss_pred cccccHHHHHHHHHcCCCccccCCCCCEEEEeecccccCCCceeeccccCCHHHHHHHHHHHHHhCCC-eEEEEEEecCc
Confidence 00 0001134445567889999999999985 9999999985
Q ss_pred -------CCCEEEEEEecCCCCC-ccceeeecCCCHHHHHHHHHc
Q 009903 350 -------RGSFYFMEMNTRIQVE-HPVTEMISSVDLIEEQIHVAM 386 (523)
Q Consensus 350 -------~G~~~liEiNpR~~g~-~~~~~~~~Gidl~~~~~~~~~ 386 (523)
.|.+++||||++++-. +......++.|+.+.+++.+.
T Consensus 703 ~~~~~~~~~~~~iiEvN~~pg~~~h~~p~~g~~~~v~~~ii~~lf 747 (750)
T 3ln6_A 703 TQAYSKDKKNATCIELNFNPLMYMHTYCQEGPGQSITPRILAKLF 747 (750)
T ss_dssp SSCCCTTTTCCEEEEEESSCCCHHHHSCSBSCCCCCHHHHHHHHC
T ss_pred cccccccCCCeEEEEEcCCcchhhhcCcccCCCCcHHHHHHHHhC
Confidence 3458999999999543 333445789999999998764
No 63
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=99.82 E-value=3.5e-19 Score=176.00 Aligned_cols=220 Identities=14% Similarity=0.090 Sum_probs=156.0
Q ss_pred CCCEEEeCCCccc--c---cHHHHHHHHHcCCceeCCCHHHHHHhCCH----HHHHHHHHHCCC---CCCCCCCccCCCH
Q 009903 143 GCTMLHPGYGFLA--E---NAVFVEMCREHGINFIGPNPDSIRIMGDK----STARETMKNAGV---PTVPGSDGLLQST 210 (523)
Q Consensus 143 ~id~Vi~~~g~~~--e---~~~~a~~~~~~gl~~~g~~~~~~~~~~dK----~~~r~~l~~~Gi---p~p~~~~~~~~s~ 210 (523)
.+|+|++..+... + ...+...++..|++++ ++++++..++|| ..+.++++++|+ |.|++ ....+.
T Consensus 68 ~~D~vi~R~~~~~~~~~~~~r~vl~~le~~Gvpvi-N~~~sI~~~~DK~~~~~~~~~~l~~~gi~~~P~~~~--~~~~~~ 144 (309)
T 1i7n_A 68 RPDFVLIRQHAFGMAENEDFRHLVIGMQYAGLPSI-NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQ--TYYPNH 144 (309)
T ss_dssp CCSEEEECSCCCCSSTTCCCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCC--EEESSG
T ss_pred cCCEEEEecccccccccchHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCCE--EeeCCh
Confidence 4799998754322 1 1355678999999998 899999999999 567778889888 85555 223343
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcE
Q 009903 211 EEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNV 290 (523)
Q Consensus 211 ~e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v 290 (523)
. +.++..|||+|+||..|+.|+||.++++.++++..++..... +..+++||||+..+++.+.++. |++
T Consensus 145 ~---~~~~~~g~PvVvK~~~Gs~G~GV~lv~~~~~~~~~~~~~~~~------~~~~~vQefI~~g~DiRv~VvG---g~v 212 (309)
T 1i7n_A 145 R---EMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALT------QTYATAEPFIDAKYDIRVQKIG---NNY 212 (309)
T ss_dssp G---GGSSCCCSSEEEEESSCSTTTTEEEECSHHHHHHHHHHHHHH------TCCEEEEECCCEEEEEEEEEET---TEE
T ss_pred h---hhhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhcc------CCeEEEEeecCCCceEEEEEEC---CEE
Confidence 3 345678999999999999999999999999999888765433 3678999999965777777773 366
Q ss_pred EEEeeece-eeeecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHc-CCccccEEEEEEeCCCCEEEEEEec--CCCCCc
Q 009903 291 VHFGERDC-SIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI-GYIGVGTVEFLLDERGSFYFMEMNT--RIQVEH 366 (523)
Q Consensus 291 ~~~~~~~~-~~~~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~al-g~~G~~~vE~~~~~~G~~~liEiNp--R~~g~~ 366 (523)
+.+..+.. ..++.+.......+.+ +++ +..+++.++.+++ |+ ++++||++.+++|.++++|||. -+ +.
T Consensus 213 ~a~~Rr~~~g~wrtN~~~~~~e~~~-l~~----e~~~la~~A~~a~gGl-di~GVDll~~~~g~~~V~EVN~~~~P--~~ 284 (309)
T 1i7n_A 213 KAYMRTSISGNWKTNTGSAMLEQIA-MSD----RYKLWVDACSEMFGGL-DICAVKAVHGKDGKDYIFEVMDCSMP--LI 284 (309)
T ss_dssp EEEEEESSCTTTSCSCCCSSEEEEC-CCH----HHHHHHHHHTTGGGCC-SEEEEEEEEETTSCEEEEEEECTTCC--CC
T ss_pred EEEEEEcCCCCCeecCCcceeeecC-CCH----HHHHHHHHHHHHhCCC-CEEEEEEEEcCCCCEEEEEECCCCCC--Cc
Confidence 65544321 1112221111111222 454 4668889999999 66 8999999999999889999999 66 33
Q ss_pred cceeeecCCCHHHHHHHHH
Q 009903 367 PVTEMISSVDLIEEQIHVA 385 (523)
Q Consensus 367 ~~~~~~~Gidl~~~~~~~~ 385 (523)
...+..++.++.+.+++..
T Consensus 285 ~~~~~~~~~~ia~~ii~~~ 303 (309)
T 1i7n_A 285 GEHQVEDRQLITDLVISKM 303 (309)
T ss_dssp SSCHHHHHHHHHHHHHHHH
T ss_pred cchhhhhHHHHHHHHHHHH
Confidence 3444557777777776543
No 64
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens}
Probab=99.81 E-value=6e-19 Score=176.36 Aligned_cols=222 Identities=12% Similarity=0.069 Sum_probs=160.4
Q ss_pred CCCEEEeCCCccc--c---cHHHHHHHHHcCCceeCCCHHHHHHhCCH----HHHHHHHHHCCC---CCCCCCCccCCCH
Q 009903 143 GCTMLHPGYGFLA--E---NAVFVEMCREHGINFIGPNPDSIRIMGDK----STARETMKNAGV---PTVPGSDGLLQST 210 (523)
Q Consensus 143 ~id~Vi~~~g~~~--e---~~~~a~~~~~~gl~~~g~~~~~~~~~~dK----~~~r~~l~~~Gi---p~p~~~~~~~~s~ 210 (523)
.+|+|++...... + ...+...++..|++++ ++++++..++|| ..+.+++.++|+ |.|+. ....+.
T Consensus 85 ~~D~vi~R~~~~~~~~~~~yr~vl~~le~~Gvpvi-N~~~sI~~~~DK~~v~~~~l~~l~~~gi~~~P~~~~--t~~~~~ 161 (344)
T 2p0a_A 85 KPDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAV-NSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQ--TFFPNH 161 (344)
T ss_dssp CCSEEEECSCSEEGGGTEECHHHHHHHHHTTCCEE-SCHHHHHHTTCHHHHHHHHHHHHHHHCTTTSCBCCC--EEESSS
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCceec-CCHHHHHhhCCchHHHHHHHHHHHHCCCCCCCCCCE--EecCch
Confidence 6899998754321 1 1355678999999998 899999999999 667778889888 85554 223333
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcE
Q 009903 211 EEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNV 290 (523)
Q Consensus 211 ~e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v 290 (523)
. +..+..|||+|+||..|+.|+||.++++.++++..++.+... +..+++||||+..+++.+.++. |++
T Consensus 162 ~---~~~~~~g~PvVvK~~~Gs~G~GV~lve~~~~~~~~~~~~~~~------~~~~~vQefI~~g~DiRv~VVG---g~v 229 (344)
T 2p0a_A 162 K---PMVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMA------KTYATTEAFIDSKYDIRIQKIG---SNY 229 (344)
T ss_dssp T---TCCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHH------TCCEEEEECCCEEEEEEEEEET---TEE
T ss_pred h---hhhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhcc------CCeEEEEeccCCCccEEEEEEC---CEE
Confidence 2 245578999999999999999999999999999888655432 3678899999965677777773 366
Q ss_pred EEEeeec-eeeeecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHc-CCccccEEEEEEeCCCCEEEEEEec--CCCCCc
Q 009903 291 VHFGERD-CSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI-GYIGVGTVEFLLDERGSFYFMEMNT--RIQVEH 366 (523)
Q Consensus 291 ~~~~~~~-~~~~~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~al-g~~G~~~vE~~~~~~G~~~liEiNp--R~~g~~ 366 (523)
+.+..+. ...++.+.......+.+ +++ ++.+++.++.+++ |+ +++.||++.+++|.++|+|||. .+ +.
T Consensus 230 va~~R~~~~g~wrtN~~~~~~e~~~-l~~----e~~~la~~Aa~a~gGl-di~GVDll~~~~G~~~VlEVN~~~~P--~~ 301 (344)
T 2p0a_A 230 KAYMRTSISGNWKANTGSAMLEQVA-MTE----RYRLWVDSCSEMFGGL-DICAVKAVHSKDGRDYIIEVMDSSMP--LI 301 (344)
T ss_dssp EEEEEEESSSCSSTTSSSEEEEEEC-CCH----HHHHHHHHHTTGGGCC-SEEEEEEEEETTSCEEEEEEECTTCC--CC
T ss_pred EEEEEecCCCCCeecCCceEEEeeC-CCH----HHHHHHHHHHHHhCCC-CEEEEEEEEcCCCCEEEEEEcCCCCC--cc
Confidence 6553322 11122222112112222 454 4668888999999 66 8999999999999889999999 65 44
Q ss_pred cceeeecCCCHHHHHHHHHcC
Q 009903 367 PVTEMISSVDLIEEQIHVAMG 387 (523)
Q Consensus 367 ~~~~~~~Gidl~~~~~~~~~G 387 (523)
..++..++.++.+.+++....
T Consensus 302 ~~~~~~~~~~Ia~~ii~~i~~ 322 (344)
T 2p0a_A 302 GEHVEEDRQLMADLVVSKMSQ 322 (344)
T ss_dssp GGGHHHHHHHHHHHHHHHHHT
T ss_pred cchhhhHHHHHHHHHHHHHHH
Confidence 455566888999998887754
No 65
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=99.81 E-value=9.4e-19 Score=177.73 Aligned_cols=220 Identities=12% Similarity=0.088 Sum_probs=157.8
Q ss_pred CCCEEEeCCCccc--c---cHHHHHHHHHcCCceeCCCHHHHHHhCCH----HHHHHHHHHCCC---CCCCCCCccCCCH
Q 009903 143 GCTMLHPGYGFLA--E---NAVFVEMCREHGINFIGPNPDSIRIMGDK----STARETMKNAGV---PTVPGSDGLLQST 210 (523)
Q Consensus 143 ~id~Vi~~~g~~~--e---~~~~a~~~~~~gl~~~g~~~~~~~~~~dK----~~~r~~l~~~Gi---p~p~~~~~~~~s~ 210 (523)
.+|+|++...... + ...+...++..|++++ ++++++..++|| ..+.++++++|+ |.++. ....+.
T Consensus 180 ~~DaviiR~~~~~~~~~~~yr~vlr~lE~~Gvpvi-Ns~~sI~~~~DK~~vf~~~l~ll~~~gi~~iP~t~~--t~~~~~ 256 (422)
T 1pk8_A 180 KPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSV-NSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQ--TFYPNH 256 (422)
T ss_dssp CCSEEEECSCSBCSSTTCBCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCC--EEESSG
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCce--EecCch
Confidence 5799998754322 1 1355678999999998 899999999999 566777888888 75554 223333
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCCcEEEEEEEEeCCCcE
Q 009903 211 EEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNV 290 (523)
Q Consensus 211 ~e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~~e~sv~v~~d~~g~v 290 (523)
.+ +++..|||+|+||..|+.|+||.++++.++++..++.+... ...+++||||+..+++.+.++. |++
T Consensus 257 ~~---~i~~~g~PvVvKp~~GS~G~GV~lve~~~~l~~ii~~~~~~------~~~~~vQEfI~~g~DIRv~VVG---g~v 324 (422)
T 1pk8_A 257 KE---MLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALT------KTYATAEPFIDAKYDVRVQKIG---QNY 324 (422)
T ss_dssp GG---CCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHH------TSCEEEEECCCEEEEEEEEEET---TEE
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEeCCHHHHHHHHHHHhcc------CceEEEEeecCCCceEEEEEEC---CEE
Confidence 22 44678999999999999999999999999999888765433 3778999999965777777773 366
Q ss_pred EEEeeec-eeeeecCceeeEecCCCCCCHHHHHHHHHHHHHHHHHc-CCccccEEEEEEeCCCCEEEEEEec--CCCCCc
Q 009903 291 VHFGERD-CSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI-GYIGVGTVEFLLDERGSFYFMEMNT--RIQVEH 366 (523)
Q Consensus 291 ~~~~~~~-~~~~~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~~~al-g~~G~~~vE~~~~~~G~~~liEiNp--R~~g~~ 366 (523)
+.+..+. ...++.+.......+.+ +++ ++.+++.++.+++ |+ +++.||++.+++|.++|+|||. .+ +.
T Consensus 325 va~~Rr~~~g~WrtNvg~g~~e~i~-lt~----e~~elA~kAaka~gGl-diaGVDlL~s~dG~~~VlEVN~s~~P--~~ 396 (422)
T 1pk8_A 325 KAYMRTSVSGNWKTNTGSAMLEQIA-MSD----RYKLWVDTCSEIFGGL-DICAVEALHGKDGRDHIIEVVGSSMP--LI 396 (422)
T ss_dssp EEEEEEESSSCSSTTSSCEEEEEEC-CCH----HHHHHHHHHTTGGGCC-SEEEEEEEEETTSCEEEEEEECTTCC--CC
T ss_pred EEEEEEcCCCCceeccCceeeeeeC-CCH----HHHHHHHHHHHHhCCC-CEEEEEEEEcCCCCEEEEEECCCCCC--Cc
Confidence 6554432 11122222222112222 454 4668899999999 66 8999999999999889999999 65 34
Q ss_pred cceeeecCCCHHHHHHHHH
Q 009903 367 PVTEMISSVDLIEEQIHVA 385 (523)
Q Consensus 367 ~~~~~~~Gidl~~~~~~~~ 385 (523)
..++..++.++.+.+++.+
T Consensus 397 ~g~~~~~~~~IA~~ii~~i 415 (422)
T 1pk8_A 397 GDHQDEDKQLIVELVVNKM 415 (422)
T ss_dssp TTCHHHHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHH
Confidence 4555567888888887765
No 66
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii}
Probab=99.79 E-value=3.1e-19 Score=171.66 Aligned_cols=177 Identities=20% Similarity=0.263 Sum_probs=136.9
Q ss_pred hCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeCCC-----CCCCceEE-eCCHHHHHHHHHHHHH
Q 009903 182 MGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAG-----GGGRGMRL-AKEPDEFVKLLQQAKS 255 (523)
Q Consensus 182 ~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~~g-----~gs~Gv~~-v~~~~el~~~~~~~~~ 255 (523)
..||..++++|+++|||+|++ ..+.+.+++.++++++|||+|+||..+ +++.||.+ ++|.+++.++++.+..
T Consensus 19 ~l~k~~~k~ll~~~GIp~p~~--~~~~~~~ea~~~a~~lg~PvvvKp~~~~~~~r~~~gGv~~~v~~~~el~~a~~~~~~ 96 (238)
T 1wr2_A 19 AMVEYEAKQVLKAYGLPVPEE--KLAKTLDEALEYAKEIGYPVVLKLMSPQILHKSDAKVVMLNIKNEEELKKKWEEIHE 96 (238)
T ss_dssp EECHHHHHHHHHTTTCCCCCC--EEESSHHHHHHHHHHHCSSEEEEEECTTCCCHHHHTCEEEEECSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCcCCCCe--EEeCCHHHHHHHHHHhCCCEEEEEccCCCCcCCccCCEEEeCCCHHHHHHHHHHHHH
Confidence 359999999999999999999 788999999999999999999999999 77889999 7999999999998876
Q ss_pred HHHHhcC---CCcEEEeeccCCCcEEEEEEEEeC-CCcEEEEeeeceeeeecCceeeEecCCCCCCHHHHHHHHHHHHHH
Q 009903 256 EAAAAFG---NDGVYLEKYVQNPRHIEFQVLADK-YGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAA 331 (523)
Q Consensus 256 ~~~~~~~---~~~~lvEefI~G~~e~sv~v~~d~-~g~v~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~l~~~a~~~ 331 (523)
.....++ ...++||+||++.+|+.+.++.|. .|.++.++.....+.......... +| ++.+..+++.+.+.++
T Consensus 97 ~~~~~~~~~~~~~vlVEe~i~~g~E~~v~v~~d~~~g~v~~~~~Gg~~iE~~~d~~~~~--~P-l~~~~~~~~~~~~~~~ 173 (238)
T 1wr2_A 97 NAKKYRPDAEILGVLVAPMLKPGREVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRL--VP-ITEKDARKMIQEIKAY 173 (238)
T ss_dssp HHHHHCTTCCCCEEEEEECCCCCEEEEEEEEEETTTEEEEEEEECSTTHHHHCCCEEEE--SS-CCHHHHHHHHHTSTTH
T ss_pred hhhhhCCCCccceEEEEECCCCCeEEEEEEEeCCCCCcEEEEecCCceeeeecceeeec--CC-CCHHHHHHHHHHHHHH
Confidence 6543333 368999999995599999999997 567777653211111111122222 23 8999999999999999
Q ss_pred HHHcCCccccEEEE-------------EEeCCCCEEEEEEecCCC
Q 009903 332 AASIGYIGVGTVEF-------------LLDERGSFYFMEMNTRIQ 363 (523)
Q Consensus 332 ~~alg~~G~~~vE~-------------~~~~~G~~~liEiNpR~~ 363 (523)
..++|++|...+|+ +.+.+++++++||||++-
T Consensus 174 ~~~~g~~G~~~~d~~~l~~~l~~l~~~~~~~~~~~~~lEINPl~~ 218 (238)
T 1wr2_A 174 PILAGARGEEPADIDAIVDMLLKVSKLVDDLKDYIKEMDLNPVFV 218 (238)
T ss_dssp HHHHCC--CCCBCHHHHHHHHHHHHHHHHHTTTTEEEEEEEEEEE
T ss_pred HHhcCCCCCChhhHHHHHHHHHHHHHHHHcCCCCeEEEeccCeEE
Confidence 99999998755553 223333399999999983
No 67
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=99.76 E-value=9.5e-18 Score=169.50 Aligned_cols=226 Identities=10% Similarity=0.110 Sum_probs=151.0
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCCCc-ccc-----
Q 009903 83 AVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGYGF-LAE----- 156 (523)
Q Consensus 83 ~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~~g~-~~e----- 156 (523)
..+++++++++|++++.++.+.. . .. . .++|+|++.... ..|
T Consensus 35 ~~~l~~al~~~G~~~~~iD~~~~--~-----------~~-------~------------~~~Dvvi~~l~~~~~ea~~~d 82 (346)
T 2q7d_A 35 FQAFAELCRKRGMEVVQLNLSRP--I-----------EE-------Q------------GPLDVIIHKLTDVILEADQND 82 (346)
T ss_dssp HHHHHHHHHTTTCEEEECCTTSC--S-----------GG-------G------------CCCSEEEECCHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCcEEEEcccccc--h-----------hh-------c------------CCCCEEEeCCcccccccccCc
Confidence 56799999999999998843210 0 00 0 247888876421 111
Q ss_pred ---cHHHHHH--HH--HcCCceeCCCHHHHHHhCCHHHHHHHHHHC-------CCCCCCCCCccCCC--HHHHHHHHH--
Q 009903 157 ---NAVFVEM--CR--EHGINFIGPNPDSIRIMGDKSTARETMKNA-------GVPTVPGSDGLLQS--TEEAVKLAD-- 218 (523)
Q Consensus 157 ---~~~~a~~--~~--~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~-------Gip~p~~~~~~~~s--~~e~~~~~~-- 218 (523)
......+ ++ ..|++++ ++++++..+.||..|.++|+++ |||+|++ ..+.+ .+++.+.++
T Consensus 83 ~~~~~~~~~l~~~~~~~~gv~vi-np~~ai~~~~dk~~~~~~L~k~~~~~~~~gIp~P~t--~~~~~~~~~~~~~~~~~~ 159 (346)
T 2q7d_A 83 SQSLELVHRFQEYIDAHPETIVL-DPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPPF--MELTSLCGDDTMRLLEKN 159 (346)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEEE-SCHHHHHHTTBHHHHHHHHHHHHHHHCBTTEECCCE--EEECSCCCTTHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHCCCeEEc-CCHHHHHHhhhHHHHHHHHHhhcccccCCCCCCCCE--EEEeCCCHHHHHHHHHhc
Confidence 1111111 22 2478877 8999999999999999999997 9999999 55554 244555443
Q ss_pred hcCCcEEEEeCCCCC--CCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccC--CCcEEEEEEEEeCCCcEEEEe
Q 009903 219 ELGFPVMIKATAGGG--GRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQ--NPRHIEFQVLADKYGNVVHFG 294 (523)
Q Consensus 219 ~~g~P~VvKP~~g~g--s~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~--G~~e~sv~v~~d~~g~v~~~~ 294 (523)
.++||+|+||..|.| +.|+.++.+.++|... ...++|||||+ | .++.|.++.+ +++...
T Consensus 160 ~lg~P~VvKP~~g~Gs~s~~v~~v~~~~~l~~~-------------~~~~lvQefI~~~G-~dirv~VvG~---~v~~~~ 222 (346)
T 2q7d_A 160 GLTFPFICKTRVAHGTNSHEMAIVFNQEGLNAI-------------QPPCVVQNFINHNA-VLYKVFVVGE---SYTVVQ 222 (346)
T ss_dssp TCCSSEEEECSBCSSTTCCEEEEECSGGGTTC---------------CCEEEEECCCCTT-EEEEEEEETT---EEEEEE
T ss_pred CCCCCEEEEecCCCcceeeeeEEecCHHHHHhc-------------CCCEEEEEeeCCCC-eEEEEEEECC---EEEEEE
Confidence 578999999997643 6799999999988752 26799999997 5 8888888732 555442
Q ss_pred eeceeee------------ecCc-----eeeEecC------CCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEEEeC-C
Q 009903 295 ERDCSIQ------------RRNQ-----KLLEEAP------SPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE-R 350 (523)
Q Consensus 295 ~~~~~~~------------~~~~-----~~~~~~p------~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~~~~-~ 350 (523)
.+..... ..++ .....+| ...+++ .+++.++|.++.++||+.. +++|++++. +
T Consensus 223 r~sl~~~~~~~~~~~~~~f~s~~~~~~g~~~~~~~~~~~~~~~~~~~--~~el~~lA~~a~~alGl~~-~gvDii~~~~~ 299 (346)
T 2q7d_A 223 RPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTELDKIEGVFERPS--DEVIRELSRALRQALGVSL-FGIDIIINNQT 299 (346)
T ss_dssp EECCCCCC----CCCCEEEEGGGTSSTTCCCGGGCCSCCCSCCCCCC--HHHHHHHHHHHHHHHCCCE-EEEEEEECTTT
T ss_pred EecCCCcCcCccccccccccceeeccCCccccccccccccccccCCC--hHHHHHHHHHHHHHhCCce-EeeEEEeecCC
Confidence 2211100 0000 0000011 011222 4689999999999999974 479999995 6
Q ss_pred CCEEEEEEecCCC
Q 009903 351 GSFYFMEMNTRIQ 363 (523)
Q Consensus 351 G~~~liEiNpR~~ 363 (523)
|.++|||||+-||
T Consensus 300 g~~~VlEVN~~PG 312 (346)
T 2q7d_A 300 GQHAVIDINAFPG 312 (346)
T ss_dssp CCEEEEEEEESCC
T ss_pred CCEEEEEEeCCcc
Confidence 7899999999774
No 68
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=1.4e-17 Score=139.54 Aligned_cols=105 Identities=45% Similarity=0.743 Sum_probs=89.5
Q ss_pred HHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHH
Q 009903 179 IRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAA 258 (523)
Q Consensus 179 ~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~ 258 (523)
+.++.||..++++|+++|||+|+++...+.+.+++.+++++++||+|+||..|++|.||.+++|.+++.++++.+.....
T Consensus 3 ~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~~~~~~gv~~v~~~~el~~~~~~~~~~~~ 82 (108)
T 2cqy_A 3 SGSSGDKIESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKASAGGGGKGMRIAWDDEETRDGFRLSSQEAA 82 (108)
T ss_dssp CCCCCCCCCSTTCCCSSCCCCCSCCCSCBSSHHHHHHHHHHHCSSEEEEETTSCCTTTCEEESSHHHHHHHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHhcCCCEEEEECCCCCCccEEEeCCHHHHHHHHHHHHHHHH
Confidence 34678999999999999999999831178899999999999999999999999999999999999999999988765433
Q ss_pred HhcCCCcEEEeeccCCCcEEEEEEE
Q 009903 259 AAFGNDGVYLEKYVQNPRHIEFQVL 283 (523)
Q Consensus 259 ~~~~~~~~lvEefI~G~~e~sv~v~ 283 (523)
..+++..+|||+||+|..|+++.++
T Consensus 83 ~~~~~~~~lvee~i~g~~E~~v~v~ 107 (108)
T 2cqy_A 83 SSFGDDRLLIEKFIDNPRHISGPSS 107 (108)
T ss_dssp HHTSSCCEEEEECCSSSSCCCSCCC
T ss_pred hhcCCCcEEEeeccCCCcEEEEEec
Confidence 3344578999999999558887654
No 69
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*
Probab=99.57 E-value=2e-15 Score=145.20 Aligned_cols=198 Identities=13% Similarity=0.097 Sum_probs=132.8
Q ss_pred CCEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHH------------
Q 009903 144 CTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTE------------ 211 (523)
Q Consensus 144 id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~------------ 211 (523)
+|.+++.++.......+.+.++..+..++ |+..++..+.||..+.++|+++|||+|++ ..+....
T Consensus 58 ~d~lisf~s~gfpl~kai~y~~lr~p~~I-Nd~~~q~~~~DK~~~~~iL~~~gIPtP~t--~~~~rd~~~~~~~~~~e~~ 134 (330)
T 3t7a_A 58 CDCLISFHSKGFPLDKAVAYAKLRNPFVI-NDLNMQYLIQDRREVYSILQAEGILLPRY--AILNRDPNNPKECNLIEGE 134 (330)
T ss_dssp CSEEEECCCTTCCHHHHHHHHHHHCCEES-BCSTHHHHHTBHHHHHHHHHHTTCCCCCE--EEECCBTTBGGGSSEEECS
T ss_pred CCEEEEeccCCCcHHHHHHHHHHhCCcee-CCHHHHHHHHHHHHHHHHHHHcCCCCCCE--EEEeCCCCCccccceeccc
Confidence 68888765322233356677777776655 89999999999999999999999999998 4444311
Q ss_pred HHHH-HHHhcCCcEEEEeCCCC-----------CCCce----EEeCCHHHH---HHHHHHHHHHHHHhcCCCcEEEeecc
Q 009903 212 EAVK-LADELGFPVMIKATAGG-----------GGRGM----RLAKEPDEF---VKLLQQAKSEAAAAFGNDGVYLEKYV 272 (523)
Q Consensus 212 e~~~-~~~~~g~P~VvKP~~g~-----------gs~Gv----~~v~~~~el---~~~~~~~~~~~~~~~~~~~~lvEefI 272 (523)
+..+ ..+.+++|+|+||..|. .|.|. .++.|.+.. +..+ ..+..+|+||||
T Consensus 135 d~i~~~g~~l~kPfVeKPv~Gsdhni~iyyp~s~GgG~~RLfrki~n~sS~~~~~~~v----------r~~~~~i~QEFI 204 (330)
T 3t7a_A 135 DHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNV----------RKTGSYIYEEFM 204 (330)
T ss_dssp SEEEETTEEEESSEEEEESBTTCCCCEEECCGGGTCCEEEEEEEETTEEEEEESCCSC----------CSSSCEEEEECC
T ss_pred hhhhhccccccCCeeEcccccccCcceeecccccCCchhhhhhhhCCcccccChhhhh----------ccCCcEEEEecc
Confidence 1111 23456899999999996 33343 344443321 1111 124789999999
Q ss_pred CC-CcEEEEEEEEeCCCcEEEEeeecee----eeecCceeeEe-cCCCCCCHHHHHHHHHHHHHHHHHcCCccccEEEEE
Q 009903 273 QN-PRHIEFQVLADKYGNVVHFGERDCS----IQRRNQKLLEE-APSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFL 346 (523)
Q Consensus 273 ~G-~~e~sv~v~~d~~g~v~~~~~~~~~----~~~~~~~~~~~-~p~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vE~~ 346 (523)
+- ++++.+-++. +++++...+... ..+.+...... .+.. ++++. +++|.++++++|+ ++++||++
T Consensus 205 ~~~G~DIRv~vVG---~~vv~Am~R~sp~~~G~~r~N~~gG~~~~~v~-Lt~ee----k~iA~kaa~a~G~-~v~GVDlL 275 (330)
T 3t7a_A 205 PTDGTDVKVYTVG---PDYAHAEARKSPALDGKVERDSEGKEVRYPVI-LNARE----KLIAWKVCLAFKQ-TVCGFDLL 275 (330)
T ss_dssp CCSSEEEEEEEES---TTCEEEEEEECTTSSCBCCBCTTSCBCCEECC-CCHHH----HHHHHHHHHHTTB-SEEEEEEE
T ss_pred CCCCceEEEEEEC---CEEEEEEEEeCCCCCCcEEEcCCCCceeeeec-CCHHH----HHHHHHHHHHhCC-ceEEEEEE
Confidence 72 3777776663 366766555431 22233322221 2333 67655 4899999999998 79999999
Q ss_pred EeCCCCEEEEEEecCCCC
Q 009903 347 LDERGSFYFMEMNTRIQV 364 (523)
Q Consensus 347 ~~~~G~~~liEiNpR~~g 364 (523)
.+++| ++++|+|.++-.
T Consensus 276 rs~~~-~~V~EVNg~~fv 292 (330)
T 3t7a_A 276 RANGQ-SYVCDVNGFSFV 292 (330)
T ss_dssp EETTE-EEEEEEEESCCC
T ss_pred EECCc-cEEEEeCCCccc
Confidence 99766 999999999843
No 70
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=99.43 E-value=2.1e-13 Score=139.45 Aligned_cols=170 Identities=16% Similarity=0.247 Sum_probs=117.4
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCc-EEEEeCCCCCCC----ceEEeCCHHHHHHHHHHHHHHH
Q 009903 183 GDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFP-VMIKATAGGGGR----GMRLAKEPDEFVKLLQQAKSEA 257 (523)
Q Consensus 183 ~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P-~VvKP~~g~gs~----Gv~~v~~~~el~~~~~~~~~~~ 257 (523)
-+++.+|++|+++|||+|++ ..+.+.+++.++++++||| +|+||..+.|++ ||.++++.+|+.++++++....
T Consensus 3 l~E~~aK~lL~~~GIpvp~~--~~~~s~eea~~aa~~lG~P~vVvK~~~~~ggrg~~gGV~l~~s~eel~~a~~~~~~~~ 80 (388)
T 2nu8_B 3 LHEYQAKQLFARYGLPAPVG--YACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKR 80 (388)
T ss_dssp CCHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHCSSCEEEEECCSSSCTTTTTCEEEECSHHHHHHHHHHHTTSE
T ss_pred CCHHHHHHHHHHCCcCCCCe--eEECCHHHHHHHHHHhCCCeEEEEEecCCCCCCccCCEEEECCHHHHHHHHHHHhhhh
Confidence 37899999999999999999 7899999999999999999 999999875544 9999999999999998875321
Q ss_pred H-------HhcCCCcEEEeeccCCCcEEEEEEEEeCC-C-cEEEEe-ee--ce-eeeecC-ceeeE--ecCCCCCCHHHH
Q 009903 258 A-------AAFGNDGVYLEKYVQNPRHIEFQVLADKY-G-NVVHFG-ER--DC-SIQRRN-QKLLE--EAPSPALTPELR 321 (523)
Q Consensus 258 ~-------~~~~~~~~lvEefI~G~~e~sv~v~~d~~-g-~v~~~~-~~--~~-~~~~~~-~~~~~--~~p~~~l~~~~~ 321 (523)
. .......++||+|+++.+|+.+.++.|.. | .++.++ .. +. .....+ ..+.. ..|...+++.+.
T Consensus 81 ~~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~v~~D~~~g~pvi~~~~~GGv~iE~v~~~~pd~i~~~~i~P~~gl~~~~a 160 (388)
T 2nu8_B 81 LVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQG 160 (388)
T ss_dssp ECCTTSCTTCEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEEEESCTTSCHHHHHHHCGGGEEEEECBTTTBCCHHHH
T ss_pred hhccccCCCCcccceEEEEEccccCCcEEEEEEEecccCCcEEEEeCCCCcchhhccccCCceEEEEecCCCCCCCHHHH
Confidence 0 00112479999999955999999999976 3 566665 21 11 111111 22222 445444777554
Q ss_pred HHHHHHHHHHHHHcCCcccc---------EE-EEEEeCCCCEEEEEEecCCC
Q 009903 322 KAMGDAAVAAAASIGYIGVG---------TV-EFLLDERGSFYFMEMNTRIQ 363 (523)
Q Consensus 322 ~~l~~~a~~~~~alg~~G~~---------~v-E~~~~~~G~~~liEiNpR~~ 363 (523)
.+ +++.+|+.+.. .+ +++. +. +..++||||+.-
T Consensus 161 ~~-------~~~~lG~~~~~~~~~~~~l~~l~~~~~-~~-d~~~lEINPl~~ 203 (388)
T 2nu8_B 161 RE-------LAFKLGLEGKLVQQFTKIFMGLATIFL-ER-DLALIEINPLVI 203 (388)
T ss_dssp HH-------HHHHTTCCTHHHHHHHHHHHHHHHHHH-HT-TEEEEEEEEEEE
T ss_pred HH-------HHHHcCCCHHHHHHHHHHHHHHHHHHH-hC-CEEEEEecceEE
Confidence 33 34445665421 00 1222 33 499999999883
No 71
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=99.42 E-value=2.5e-13 Score=138.91 Aligned_cols=169 Identities=20% Similarity=0.268 Sum_probs=116.4
Q ss_pred CHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCC-cEEEEeC--CCCCCC---------ceEEeCCHHHHHHHHH
Q 009903 184 DKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGF-PVMIKAT--AGGGGR---------GMRLAKEPDEFVKLLQ 251 (523)
Q Consensus 184 dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~-P~VvKP~--~g~gs~---------Gv~~v~~~~el~~~~~ 251 (523)
+++.+|++|+++|||+|++ ..+.+.+++.++++++|| |+|+||. .|+.|+ ||.+++|.+|+.++++
T Consensus 4 ~E~~aK~lL~~~GIpvp~~--~~~~s~~ea~~~a~~lg~~PvVvK~~i~~GGrGKg~~ks~~~GGV~l~~s~~e~~~a~~ 81 (395)
T 2fp4_B 4 QEYQSKKLMSDNGVKVQRF--FVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAK 81 (395)
T ss_dssp CHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHTCSSEEEEECCSSSCGGGCEETTSCBCSEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHHCCcCCCCe--EEECCHHHHHHHHHHcCCCcEEEEEeeccCCCccCccccCCcCCEEEECCHHHHHHHHH
Confidence 6789999999999999999 789999999999999999 8999995 444444 4999999999999998
Q ss_pred HHHHHHH--Hh---cC--CCcEEEeeccCCCcEEEEEEEEeCCC--cEEEEe-eeceeee---ec-CceeeE--ecCCCC
Q 009903 252 QAKSEAA--AA---FG--NDGVYLEKYVQNPRHIEFQVLADKYG--NVVHFG-ERDCSIQ---RR-NQKLLE--EAPSPA 315 (523)
Q Consensus 252 ~~~~~~~--~~---~~--~~~~lvEefI~G~~e~sv~v~~d~~g--~v~~~~-~~~~~~~---~~-~~~~~~--~~p~~~ 315 (523)
++..... .. .+ ...++||+|++..+|+.+.++.|+.. .++.++ ..-..+. .. ...+.. ..|...
T Consensus 82 ~~l~~~~~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~i~~D~~~~~pvi~~s~~GG~~iE~va~~~~d~i~~~~idp~~~ 161 (395)
T 2fp4_B 82 QMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEG 161 (395)
T ss_dssp TTTTSEEECTTSCTTCEECCCEEEEECCCCSEEEEEEEEEETTTTEEEEEEESSCSSCHHHHHHHCGGGCEEEECCTTTC
T ss_pred HHhhcchhhhccCCCCCccceEEEEEccCCceeEEEEEEEccccCceEEEEECCCCccceeccccCCceEEEEecCCCCC
Confidence 7653210 00 01 24799999999559999999999752 566654 2111111 11 122222 223333
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCccccEEE----------EEEeCCCCEEEEEEecCCC
Q 009903 316 LTPELRKAMGDAAVAAAASIGYIGVGTVE----------FLLDERGSFYFMEMNTRIQ 363 (523)
Q Consensus 316 l~~~~~~~l~~~a~~~~~alg~~G~~~vE----------~~~~~~G~~~liEiNpR~~ 363 (523)
+++ ..+.++++.||+.|...-. ++. +. +++++||||+.-
T Consensus 162 l~~-------~~a~~l~~~lg~~~~~~~~~~~~l~~l~~l~~-~~-d~~~lEINPl~~ 210 (395)
T 2fp4_B 162 IKD-------SQAQRMAENLGFLGPLQNQAADQIKKLYNLFL-KI-DATQVEVNPFGE 210 (395)
T ss_dssp CCH-------HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH-HT-TEEEEEEEEEEE
T ss_pred CCH-------HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhh-hC-CeEEEEeeeEEE
Confidence 665 4456667777876532111 122 33 499999999983
No 72
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=99.06 E-value=3.9e-10 Score=115.41 Aligned_cols=109 Identities=28% Similarity=0.385 Sum_probs=88.6
Q ss_pred CHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeCCCCCCC----ceEEeCCHHHHHHHHHHHHHHHHH
Q 009903 184 DKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGR----GMRLAKEPDEFVKLLQQAKSEAAA 259 (523)
Q Consensus 184 dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~~g~gs~----Gv~~v~~~~el~~~~~~~~~~~~~ 259 (523)
+-+..|++|+++|||+|++ ..+.+.+++.++++++|||+|+||....+++ ||.++++.+|+.++++++......
T Consensus 4 ~E~~aK~lL~~~GIpvp~~--~~~~s~eea~~aa~~lG~PvVvKa~~~~ggkg~~GGV~l~~s~ee~~~a~~~~~~~~~~ 81 (397)
T 3ufx_B 4 HEYQAKEILARYGVPVPPG--KVAYTPEEAKRIAEEFGKRVVIKAQVHVGGRGKAGGVKLADTPQEAYEKAQAILGMNIK 81 (397)
T ss_dssp CHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHTSCEEEEECCSSSCTTTTTCEEEESSHHHHHHHHHHHTTCEET
T ss_pred CHHHHHHHHHHCCCCCCCe--EEECCHHHHHHHHHHcCCCEEEEEccccCCCCccceEEEeCCHHHHHHHHHHhhhhhcc
Confidence 4577899999999999999 7899999999999999999999999855554 899999999999999887532111
Q ss_pred hcCCCcEEEeeccCCCcEEEEEEEEeCCC--cEEEEe
Q 009903 260 AFGNDGVYLEKYVQNPRHIEFQVLADKYG--NVVHFG 294 (523)
Q Consensus 260 ~~~~~~~lvEefI~G~~e~sv~v~~d~~g--~v~~~~ 294 (523)
.+....++||+|+++.+|+.+.++.|... .++.++
T Consensus 82 g~~~~~vlVEe~v~~g~El~vgv~~D~~~g~pvi~~s 118 (397)
T 3ufx_B 82 GLTVKKVLVAEAVDIAKEYYAGLILDRAKKRVVLMLS 118 (397)
T ss_dssp TEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEEEE
T ss_pred CCccceEEEEEeecCCeeEEEEEEecCCCCCcEEEEe
Confidence 11236899999999449999999998764 355553
No 73
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A*
Probab=98.15 E-value=2.2e-05 Score=78.96 Aligned_cols=158 Identities=18% Similarity=0.294 Sum_probs=89.1
Q ss_pred CCcEEEEeCCCCCCCceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccC-------CCc--EEEEEEEEeCCCcEE
Q 009903 221 GFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQ-------NPR--HIEFQVLADKYGNVV 291 (523)
Q Consensus 221 g~P~VvKP~~g~gs~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~-------G~~--e~sv~v~~d~~g~v~ 291 (523)
+.++|+||..++.|+|+.++++.+++.+.++.. ...++||+||+ +++ ++.+-++....-++.
T Consensus 147 ~~~wI~KP~~~srG~GI~l~~~~~~i~~~~~~~---------~~~~VvQkYI~~PlLi~~~grKFDlR~Yvlvts~l~vy 217 (380)
T 3tig_A 147 GNVWIAKSSSGAKGEGILISSDATELLDFIDNQ---------GQVHVIQKYLESPLLLEPGHRKFDIRSWVLVDNQYNIY 217 (380)
T ss_dssp CCCEEEEESCC----CCBCCSCSHHHHHHHHHH---------TSCEEEEECCSSBCCBTTTTBCEEEEEEEEECTTCCEE
T ss_pred CCeEEEeCCccCCCCCEEEeCCHHHHHHHHhcc---------CCcEEEEecccCceeecCCCceeEEEEEEEEcCCCEEE
Confidence 578999999999999999999999988776531 36899999995 324 444445544322332
Q ss_pred EEe-------eecee---------------eeecCce-ee---Eec-----------C---CCCCCHHHHHHHHHHHHHH
Q 009903 292 HFG-------ERDCS---------------IQRRNQK-LL---EEA-----------P---SPALTPELRKAMGDAAVAA 331 (523)
Q Consensus 292 ~~~-------~~~~~---------------~~~~~~~-~~---~~~-----------p---~~~l~~~~~~~l~~~a~~~ 331 (523)
.+. ...+. ++..+.. .. ... . ..........+|.+++.++
T Consensus 218 ~y~~g~~Rfa~~~y~~~~~~~~~~HLTN~~iqk~~~~~y~~~~~g~~~~~~~f~~yL~~~~~~~~~~~i~~~I~~ii~~~ 297 (380)
T 3tig_A 218 LYREGVLRTSSEPYSDTNFQDMTSHLTNHCIQKEHSKNYGRYEEGNEMFFEEFNQYLVTSLNINLENSILCQIKEIIRVC 297 (380)
T ss_dssp ECSCCEEEECC----------------------------------CCBCHHHHHHHHSTTSSCCHHHHTHHHHHHHHHHH
T ss_pred EEcCCEEEecCCCcCccchhhhhhhccccccccccccccccccCCCcCcHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 220 00000 0000000 00 000 0 0001134455666666665
Q ss_pred HHH----cC-----Cc--cccEEEEEEeCCCCEEEEEEecCCCCCccceeeecCCCHHHHHHHHHcCCCCCC
Q 009903 332 AAS----IG-----YI--GVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKLRY 392 (523)
Q Consensus 332 ~~a----lg-----~~--G~~~vE~~~~~~G~~~liEiNpR~~g~~~~~~~~~Gidl~~~~~~~~~G~~~~~ 392 (523)
+.+ +. .. ..+++||++|+++++++||||..|+-... .=-++++.+++++++--+++
T Consensus 298 l~a~~~~i~~~~~~~~~FEl~G~D~lid~~l~~wllEVN~~P~~~q~-----~i~~l~~~~~~iavdp~f~~ 364 (380)
T 3tig_A 298 LSCLEPAISTKYLPYHSFQLFGFDFMVDKNLKVWLIEVNGAPACAQK-----LYAELCKGIVDLAISSVFPL 364 (380)
T ss_dssp HHHHHHHHCCTTSSSEECEEEEEEEEEBTTCCEEEEEEESSCCCCTT-----THHHHHHHHHHHTTTTTSCC
T ss_pred HHHHHHHhhhcccCCceEEEEeEEEEEcCCCcEEEEEEeCCCCccHH-----hHHHHHHHHHHHhcccccCC
Confidence 554 21 22 57899999999999999999999953321 22346777888777654443
No 74
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A*
Probab=97.29 E-value=0.00028 Score=72.26 Aligned_cols=107 Identities=12% Similarity=0.002 Sum_probs=76.9
Q ss_pred HHHHHHHHHCCC---C-CC--CCCCccCC---CHHHHHHHHHhcC-CcEEEEeCCCCC----CCceEEeCCHHHHHHHHH
Q 009903 186 STARETMKNAGV---P-TV--PGSDGLLQ---STEEAVKLADELG-FPVMIKATAGGG----GRGMRLAKEPDEFVKLLQ 251 (523)
Q Consensus 186 ~~~r~~l~~~Gi---p-~p--~~~~~~~~---s~~e~~~~~~~~g-~P~VvKP~~g~g----s~Gv~~v~~~~el~~~~~ 251 (523)
+..|++|.++++ | +. ++ ..++ |.+++.+.++++| ||+|+|+..-.| .-||.+..+.+++.+++.
T Consensus 9 y~~K~ll~~~~~~~~~~~~~~~~--~~~~~~~~~~eA~~~a~~lg~~pvVvKaqv~~ggRgk~GGV~l~~s~eev~~aa~ 86 (425)
T 3mwd_A 9 QTGKELLYKFICTTSAIQNRFKY--ARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLK 86 (425)
T ss_dssp HHHHHHHHHHCCCSSCBCSTTCC--EEECTTCCHHHHHHHCGGGGTSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHHT
T ss_pred HHHHHHHHHhccccCCccCCcce--EEeCCCCCHHHHHHHHHHhCCCCEEEEeccccCCCCcCCeEEEECCHHHHHHHHH
Confidence 567888888888 3 22 23 3344 5588888899998 999999966333 236989999999999887
Q ss_pred HHHHHHHHh----cCCCcEEEeeccCC--CcEEEEEEEEeCCCcEEEEe
Q 009903 252 QAKSEAAAA----FGNDGVYLEKYVQN--PRHIEFQVLADKYGNVVHFG 294 (523)
Q Consensus 252 ~~~~~~~~~----~~~~~~lvEefI~G--~~e~sv~v~~d~~g~v~~~~ 294 (523)
++....... ..-..++||++++. .+|+-+.+..|..|.++.++
T Consensus 87 ~ml~~~~~~~~~~~~v~~vlVe~~~~~~~~~E~ylgi~~Dr~gpvI~~s 135 (425)
T 3mwd_A 87 PRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFH 135 (425)
T ss_dssp TTTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTEEEEEEE
T ss_pred HHHhhhhhccCCCceEEEEEEEecccCCCCceEEEEEEecCCCCEEEEE
Confidence 764321100 00246999999974 38999999999888877774
No 75
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=97.00 E-value=0.00058 Score=75.28 Aligned_cols=108 Identities=13% Similarity=0.039 Sum_probs=78.7
Q ss_pred HHHHHHHHHHCCCC------CCCCCCccCCC---HHHHHHHHHhcC-CcEEEEeCCCCCCC----ceEEeCCHHHHHHHH
Q 009903 185 KSTARETMKNAGVP------TVPGSDGLLQS---TEEAVKLADELG-FPVMIKATAGGGGR----GMRLAKEPDEFVKLL 250 (523)
Q Consensus 185 K~~~r~~l~~~Gip------~p~~~~~~~~s---~~e~~~~~~~~g-~P~VvKP~~g~gs~----Gv~~v~~~~el~~~~ 250 (523)
-+..|++|.++++| .+++ ..+++ .+++.+.++.+| +|+|+|+..-.|++ ||.+..|.+|+.+++
T Consensus 8 Ey~aK~ll~~~~~~~~~~~~~~~~--~~v~~~~~~~eA~~aa~~lg~~pvVvKaQv~~GgRGKaGGVkL~~s~eEa~~aa 85 (829)
T 3pff_A 8 EQTGKELLYKFICTTSAIQNRFKY--ARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWL 85 (829)
T ss_dssp HHHHHHHHHHHCCCSSCBCSTTCC--EEECTTCCHHHHHHHCTHHHHSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhCccccccccCCce--EEeCCCCCHHHHHHHHHHhCCCCEEEEecccccCCCcCCeEEEECCHHHHHHHH
Confidence 35678888898888 4455 44444 477777777887 99999997655544 588999999999988
Q ss_pred HHHHHHHHHh----cCCCcEEEeeccCC--CcEEEEEEEEeCCCcEEEEe
Q 009903 251 QQAKSEAAAA----FGNDGVYLEKYVQN--PRHIEFQVLADKYGNVVHFG 294 (523)
Q Consensus 251 ~~~~~~~~~~----~~~~~~lvEefI~G--~~e~sv~v~~d~~g~v~~~~ 294 (523)
+++....... ..-..++||++++. .+||-+.+..|..|.++.++
T Consensus 86 ~~iLg~~~~~~~p~~~V~gvLVE~m~~~~~~~ElYvgI~~Dr~gpvIm~s 135 (829)
T 3pff_A 86 KPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFH 135 (829)
T ss_dssp TTTTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHhhcCCCceEEEEEEEecccCCCccEEEEEEEecCCCCEEEEE
Confidence 7764322110 00146999999964 38999999999888877775
No 76
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.95 E-value=0.0025 Score=52.48 Aligned_cols=93 Identities=10% Similarity=0.093 Sum_probs=60.7
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcC-CcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMG-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G-~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
|+++|+|+|+|.+|..+++.+.+.| +++++++.+.+.........-..+.. +..+.+.+.+..+ ++|.|+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~-------d~~~~~~~~~~~~--~~d~vi 74 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQV-------DAKDEAGLAKALG--GFDAVI 74 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEEC-------CTTCHHHHHHHTT--TCSEEE
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEe-------cCCCHHHHHHHHc--CCCEEE
Confidence 5689999999999999999999999 88888854332111111111122332 3556666766654 689998
Q ss_pred eCCCcccccHHHHHHHHHcCCcee
Q 009903 149 PGYGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
.+.+.. ....+.+.+.+.|++++
T Consensus 75 ~~~~~~-~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 75 SAAPFF-LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp ECSCGG-GHHHHHHHHHHTTCEEE
T ss_pred ECCCch-hhHHHHHHHHHhCCCEE
Confidence 776432 23466677777887765
No 77
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.76 E-value=0.0012 Score=56.96 Aligned_cols=117 Identities=13% Similarity=0.014 Sum_probs=65.7
Q ss_pred CCCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 68 TCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 68 ~~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
..+.++|+|+|.|..|..+++.+++.|+++++++.+++.........-..+. + +..+.+.+.+ +.-.+.|.|
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~-g------d~~~~~~l~~-a~i~~ad~v 75 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVL-G------NAANEEIMQL-AHLECAKWL 75 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE-S------CTTSHHHHHH-TTGGGCSEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEE-C------CCCCHHHHHh-cCcccCCEE
Confidence 4567899999999999999999999999999996554322221221122232 2 2444444433 223468888
Q ss_pred EeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCC
Q 009903 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (523)
Q Consensus 148 i~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip 198 (523)
+.+.+...++......+.+++ +....+....|.... +.|++.|+.
T Consensus 76 i~~~~~~~~n~~~~~~a~~~~-----~~~~iiar~~~~~~~-~~l~~~G~d 120 (140)
T 3fwz_A 76 ILTIPNGYEAGEIVASARAKN-----PDIEIIARAHYDDEV-AYITERGAN 120 (140)
T ss_dssp EECCSCHHHHHHHHHHHHHHC-----SSSEEEEEESSHHHH-HHHHHTTCS
T ss_pred EEECCChHHHHHHHHHHHHHC-----CCCeEEEEECCHHHH-HHHHHCCCC
Confidence 876543222322333344331 111223334444333 456677765
No 78
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.59 E-value=0.0024 Score=54.77 Aligned_cols=90 Identities=14% Similarity=-0.014 Sum_probs=54.2
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
+++|+|+|.|..|..+++.+.+.|++|++++.+++.........-..+.. +..+.+.+.++ .-.++|.|+.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~g-------d~~~~~~l~~~-~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIA-------DPTDESFYRSL-DLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEEC-------CTTCHHHHHHS-CCTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEEC-------CCCCHHHHHhC-CcccCCEEEEe
Confidence 57899999999999999999999999999965433211111111122322 24455444432 22468888877
Q ss_pred CCcccccHHHHHHHHHcC
Q 009903 151 YGFLAENAVFVEMCREHG 168 (523)
Q Consensus 151 ~g~~~e~~~~a~~~~~~g 168 (523)
.+....+......+++.+
T Consensus 78 ~~~~~~n~~~~~~a~~~~ 95 (141)
T 3llv_A 78 GSDDEFNLKILKALRSVS 95 (141)
T ss_dssp CSCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHhC
Confidence 653222334445555554
No 79
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.52 E-value=0.026 Score=56.11 Aligned_cols=95 Identities=13% Similarity=0.039 Sum_probs=64.1
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcccc-------ccCeeEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-------LADESVCIGEAPSSQSYLLIPNVLSAAISR 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~-------~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~ 142 (523)
+++|||+|+ |.+|..+++.+.+.|++|+++..+......... ..-+.+.. +..|.+.+.++.++.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~-------Dl~d~~~l~~~~~~~ 82 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYG-------LINEQEAMEKILKEH 82 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEEC-------CTTCHHHHHHHHHHT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEe-------ecCCHHHHHHHHhhC
Confidence 368999997 889999999999999999999654322111010 11122332 467888999999877
Q ss_pred CCCEEEeCCCcccc--cHHHHHHHHHcC-Ccee
Q 009903 143 GCTMLHPGYGFLAE--NAVFVEMCREHG-INFI 172 (523)
Q Consensus 143 ~id~Vi~~~g~~~e--~~~~a~~~~~~g-l~~~ 172 (523)
++|.|+-..+...- ...+.+.+.+.| ++.+
T Consensus 83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 83 EIDIVVSTVGGESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEE
T ss_pred CCCEEEECCchhhHHHHHHHHHHHHHcCCceEE
Confidence 89999977553211 135667777777 6543
No 80
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.47 E-value=0.013 Score=51.03 Aligned_cols=39 Identities=15% Similarity=0.141 Sum_probs=32.2
Q ss_pred cCCCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCC
Q 009903 67 VTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID 105 (523)
Q Consensus 67 ~~~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~ 105 (523)
.....++|+|+|.|..|..+++.+++.|++|++++.+.+
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 344567999999999999999999999999999965443
No 81
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.42 E-value=0.014 Score=57.12 Aligned_cols=123 Identities=15% Similarity=0.178 Sum_probs=75.4
Q ss_pred CCCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccc----cccCeeEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009903 68 TCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV----KLADESVCIGEAPSSQSYLLIPNVLSAAISR 142 (523)
Q Consensus 68 ~~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~----~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~ 142 (523)
..|+++|||+|+ |.+|..+++++.+.|++|+++..+........ ...-+.+.. |..+.+.+.++++
T Consensus 8 ~~m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~-------Dl~d~~~l~~a~~-- 78 (318)
T 2r6j_A 8 NGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKG-------ELDEHEKLVELMK-- 78 (318)
T ss_dssp -CCCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEEC-------CTTCHHHHHHHHT--
T ss_pred cCCCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEe-------cCCCHHHHHHHHc--
Confidence 346679999996 88999999999999999999865443111000 001123332 4677888888775
Q ss_pred CCCEEEeCCCccc--ccHHHHHHHHHcC-Ccee-----CCCH-------HHHHHhCCHHHHHHHHHHCCCCC
Q 009903 143 GCTMLHPGYGFLA--ENAVFVEMCREHG-INFI-----GPNP-------DSIRIMGDKSTARETMKNAGVPT 199 (523)
Q Consensus 143 ~id~Vi~~~g~~~--e~~~~a~~~~~~g-l~~~-----g~~~-------~~~~~~~dK~~~r~~l~~~Gip~ 199 (523)
++|.|+-..+... ....+.+.+.+.| ++.+ |.+. ........|....+++++.|++.
T Consensus 79 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~ 150 (318)
T 2r6j_A 79 KVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPY 150 (318)
T ss_dssp TCSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred CCCEEEECCchhhhHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhHHHHHHHHHHHHhcCCCe
Confidence 5999987654321 1235667777777 5422 2110 01112256777788888887764
No 82
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.11 E-value=0.041 Score=49.70 Aligned_cols=72 Identities=14% Similarity=0.103 Sum_probs=48.1
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
|+|||+|+ |.+|..+++.+.+.|++|++++.+...........-+.+.. +..+.+.+.++.+ ++|.|+-.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~--~~d~vi~~ 74 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVG-------DVLQAADVDKTVA--GQDAVIVL 74 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEES-------CTTSHHHHHHHHT--TCSEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEe-------cCCCHHHHHHHHc--CCCEEEEC
Confidence 68999997 88999999999999999999865433221100001122222 3667777777765 58998866
Q ss_pred CC
Q 009903 151 YG 152 (523)
Q Consensus 151 ~g 152 (523)
.+
T Consensus 75 a~ 76 (206)
T 1hdo_A 75 LG 76 (206)
T ss_dssp CC
T ss_pred cc
Confidence 44
No 83
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.08 E-value=0.012 Score=50.16 Aligned_cols=74 Identities=19% Similarity=0.171 Sum_probs=45.8
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
+++|+|+|+|..|..+++.+.+.|+++++++.+.+............+.. +..+.+.+.+. .-.++|.|+.+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~-------d~~~~~~l~~~-~~~~~d~vi~~ 77 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIA-------NATEENELLSL-GIRNFEYVIVA 77 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEEC-------CTTCHHHHHTT-TGGGCSEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEe-------CCCCHHHHHhc-CCCCCCEEEEC
Confidence 56899999999999999999999999999864332211111111222222 23344444332 12458999876
Q ss_pred CC
Q 009903 151 YG 152 (523)
Q Consensus 151 ~g 152 (523)
.+
T Consensus 78 ~~ 79 (144)
T 2hmt_A 78 IG 79 (144)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 84
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=95.83 E-value=0.042 Score=46.80 Aligned_cols=95 Identities=11% Similarity=0.129 Sum_probs=61.3
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
.++++|+|+|..|..+++.+.+. |++++.+..+ ++......+....+. . .+.+.+++++.++|.|+.
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~-~~~~~g~~i~g~pV~----------g-~~~l~~~~~~~~id~vii 71 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD-DRKKHKTTMQGITIY----------R-PKYLERLIKKHCISTVLL 71 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS-CGGGTTCEETTEEEE----------C-GGGHHHHHHHHTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC-CcccCCCEecCeEEE----------C-HHHHHHHHHHCCCCEEEE
Confidence 57899999999999999999876 8888877532 222222222222221 1 446777888889998887
Q ss_pred CCCcccc--cHHHHHHHHHcCCcee-CCCHH
Q 009903 150 GYGFLAE--NAVFVEMCREHGINFI-GPNPD 177 (523)
Q Consensus 150 ~~g~~~e--~~~~a~~~~~~gl~~~-g~~~~ 177 (523)
+.+.... ...+.+.++..|+.+. -|+..
T Consensus 72 a~~~~~~~~~~~i~~~l~~~gv~v~~vP~~~ 102 (141)
T 3nkl_A 72 AVPSASQVQKKVIIESLAKLHVEVLTIPNLD 102 (141)
T ss_dssp CCTTSCHHHHHHHHHHHHTTTCEEEECCCHH
T ss_pred eCCCCCHHHHHHHHHHHHHcCCeEEECCCHH
Confidence 6543211 1356677888888753 34433
No 85
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=95.82 E-value=0.072 Score=45.97 Aligned_cols=101 Identities=17% Similarity=0.148 Sum_probs=62.7
Q ss_pred ccEEEEEcC----cHHHHHHHHHHHHcCCcEEEEecCC--CCCC---c---cccc---cCeeEEcCCCCCCCCCCCHHHH
Q 009903 71 QEKILVANR----GEIAVRVIRTAHEMGIPCVAVYSTI--DKDA---L---HVKL---ADESVCIGEAPSSQSYLLIPNV 135 (523)
Q Consensus 71 ~k~ILi~g~----g~~~~~vi~aa~~~G~~vi~v~~~~--~~~~---~---~~~~---ad~~~~~~~~~~~~~~~~~~~l 135 (523)
.++|.|+|. |..|..+++.+.+.|++++.+++.. .... . ...+ +|-.+..- .......+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~v------p~~~v~~v 86 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFR------NSEAAWGV 86 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCS------CSTHHHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEe------CHHHHHHH
Confidence 367999998 6689999999999999988886544 2110 0 0011 12222111 12334455
Q ss_pred HHHHHHcCCCEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHH
Q 009903 136 LSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSI 179 (523)
Q Consensus 136 ~~~~~~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~ 179 (523)
++.+.+.++..|+...+. ....+.+.+++.|+.++||+---+
T Consensus 87 ~~~~~~~g~~~i~i~~~~--~~~~l~~~a~~~Gi~~igpnc~g~ 128 (145)
T 2duw_A 87 AQEAIAIGAKTLWLQLGV--INEQAAVLAREAGLSVVMDRCPAI 128 (145)
T ss_dssp HHHHHHHTCCEEECCTTC--CCHHHHHHHHTTTCEEECSCCHHH
T ss_pred HHHHHHcCCCEEEEcCCh--HHHHHHHHHHHcCCEEEcCCeeeE
Confidence 554555677777765443 245777888888999888764443
No 86
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=95.70 E-value=0.054 Score=45.26 Aligned_cols=96 Identities=15% Similarity=-0.028 Sum_probs=63.7
Q ss_pred ccEEEEEcCcH----HHHHHHHHHHHcCCcEEEEecCCCCCCc---cccc-----cCeeEEcCCCCCCCCCCCHHHHHHH
Q 009903 71 QEKILVANRGE----IAVRVIRTAHEMGIPCVAVYSTIDKDAL---HVKL-----ADESVCIGEAPSSQSYLLIPNVLSA 138 (523)
Q Consensus 71 ~k~ILi~g~g~----~~~~vi~aa~~~G~~vi~v~~~~~~~~~---~~~~-----ad~~~~~~~~~~~~~~~~~~~l~~~ 138 (523)
.++|.|+|++. .+..+++.+.+.||+++.+++..+...- +.++ .|-.+..- .......+++.
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~vDlavi~~------p~~~v~~~v~e 77 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEGVDTVTLYI------NPQNQLSEYNY 77 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTTCCEEEECS------CHHHHGGGHHH
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCCCCEEEEEe------CHHHHHHHHHH
Confidence 47899999764 5899999999999999999654332110 1111 23222211 11223345566
Q ss_pred HHHcCCCEEEeCCCcccccHHHHHHHHHcCCceeCC
Q 009903 139 AISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGP 174 (523)
Q Consensus 139 ~~~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~ 174 (523)
+.+.++..|+...|+ +...+.+.+++.|++++|+
T Consensus 78 ~~~~g~k~v~~~~G~--~~~e~~~~a~~~Girvv~n 111 (122)
T 3ff4_A 78 ILSLKPKRVIFNPGT--ENEELEEILSENGIEPVIG 111 (122)
T ss_dssp HHHHCCSEEEECTTC--CCHHHHHHHHHTTCEEEES
T ss_pred HHhcCCCEEEECCCC--ChHHHHHHHHHcCCeEECC
Confidence 666788888887777 4568889999999999864
No 87
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=95.69 E-value=0.075 Score=45.44 Aligned_cols=101 Identities=14% Similarity=0.076 Sum_probs=62.9
Q ss_pred ccEEEEEcC----cHHHHHHHHHHHHcCCcEEEEecCCCCCC--c----ccc---ccCeeEEcCCCCCCCCCCCHHHHHH
Q 009903 71 QEKILVANR----GEIAVRVIRTAHEMGIPCVAVYSTIDKDA--L----HVK---LADESVCIGEAPSSQSYLLIPNVLS 137 (523)
Q Consensus 71 ~k~ILi~g~----g~~~~~vi~aa~~~G~~vi~v~~~~~~~~--~----~~~---~ad~~~~~~~~~~~~~~~~~~~l~~ 137 (523)
.++|.|+|. |..|..+++.+.+.|++++.+++...... + ... -+|-.+..- ......++++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~v------p~~~v~~v~~ 87 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVV------PPKVGLQVAK 87 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECS------CHHHHHHHHH
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEe------CHHHHHHHHH
Confidence 568999999 88999999999999999888865432110 0 001 122222211 1122344444
Q ss_pred HHHHcCCCEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHH
Q 009903 138 AAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSI 179 (523)
Q Consensus 138 ~~~~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~ 179 (523)
.+.+.++..++...+. +...+.+.+++.|++++||+--.+
T Consensus 88 ~~~~~g~~~i~~~~~~--~~~~l~~~a~~~Gi~~igpnc~g~ 127 (138)
T 1y81_A 88 EAVEAGFKKLWFQPGA--ESEEIRRFLEKAGVEYSFGRCIMV 127 (138)
T ss_dssp HHHHTTCCEEEECTTS--CCHHHHHHHHHHTCEEECSCCHHH
T ss_pred HHHHcCCCEEEEcCcc--HHHHHHHHHHHCCCEEEcCCcceE
Confidence 4555677777765543 356777888888999888764433
No 88
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.39 E-value=0.068 Score=49.85 Aligned_cols=75 Identities=15% Similarity=0.080 Sum_probs=49.0
Q ss_pred CCCccEEEEEcC-cHHHHHHHHHHHHcC-CcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009903 68 TCRQEKILVANR-GEIAVRVIRTAHEMG-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (523)
Q Consensus 68 ~~~~k~ILi~g~-g~~~~~vi~aa~~~G-~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id 145 (523)
..|||+|||+|+ |.+|..+++.+.+.| ++|+++..+.+.........-..+.. |..+.+.+.++++ ++|
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~--~~D 90 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMG-------DVLNHAALKQAMQ--GQD 90 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEEC-------CTTCHHHHHHHHT--TCS
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEe-------cCCCHHHHHHHhc--CCC
Confidence 345789999995 889999999999999 89988864433221111101122222 4667788887775 589
Q ss_pred EEEeCC
Q 009903 146 MLHPGY 151 (523)
Q Consensus 146 ~Vi~~~ 151 (523)
.|+-..
T Consensus 91 ~vv~~a 96 (236)
T 3qvo_A 91 IVYANL 96 (236)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 988543
No 89
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=95.29 E-value=0.14 Score=44.13 Aligned_cols=101 Identities=15% Similarity=0.076 Sum_probs=63.2
Q ss_pred ccEEEEEcC----cHHHHHHHHHHHHcCCcEEEEecCCCCCC--c----cccc---cCeeEEcCCCCCCCCCCCHHHHHH
Q 009903 71 QEKILVANR----GEIAVRVIRTAHEMGIPCVAVYSTIDKDA--L----HVKL---ADESVCIGEAPSSQSYLLIPNVLS 137 (523)
Q Consensus 71 ~k~ILi~g~----g~~~~~vi~aa~~~G~~vi~v~~~~~~~~--~----~~~~---ad~~~~~~~~~~~~~~~~~~~l~~ 137 (523)
.++|.|+|. |..|..+++.+++.|++++-+++...... + ...+ .|-.+..- .......+++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~v------p~~~~~~vv~ 95 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFV------KPKLTMEYVE 95 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECS------CHHHHHHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeECCeeccCCHHHcCCCCCEEEEEe------CHHHHHHHHH
Confidence 468999998 46789999999999999888854332110 0 0011 22222211 1122345555
Q ss_pred HHHHcCCCEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHH
Q 009903 138 AAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSI 179 (523)
Q Consensus 138 ~~~~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~ 179 (523)
.+.+.++..++...+. ....+.+.+++.|++++||+--.+
T Consensus 96 ~~~~~gi~~i~~~~g~--~~~~l~~~a~~~Gi~vvGpnc~gv 135 (144)
T 2d59_A 96 QAIKKGAKVVWFQYNT--YNREASKKADEAGLIIVANRCMMR 135 (144)
T ss_dssp HHHHHTCSEEEECTTC--CCHHHHHHHHHTTCEEEESCCHHH
T ss_pred HHHHcCCCEEEECCCc--hHHHHHHHHHHcCCEEEcCCchhh
Confidence 5566778888766554 356778888999999998764433
No 90
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.14 E-value=0.011 Score=60.63 Aligned_cols=115 Identities=19% Similarity=0.142 Sum_probs=66.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
.++|+|+|.|..|..+++.|.+.|++|++++.+++............++ + +..+.+.+.+ +.-.+.|+|+.+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~-G------Dat~~~~L~~-agi~~A~~viv~ 75 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFY-G------DATRMDLLES-AGAAKAEVLINA 75 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEE-S------CTTCHHHHHH-TTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEE-c------CCCCHHHHHh-cCCCccCEEEEC
Confidence 3579999999999999999999999999997655433222222223333 2 3445444433 333457888877
Q ss_pred CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCC
Q 009903 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT 199 (523)
Q Consensus 151 ~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~ 199 (523)
.+....+..+...+++++ |+...+..+.|..... .|.+.|+..
T Consensus 76 ~~~~~~n~~i~~~ar~~~-----p~~~Iiara~~~~~~~-~L~~~Gad~ 118 (413)
T 3l9w_A 76 IDDPQTNLQLTEMVKEHF-----PHLQIIARARDVDHYI-RLRQAGVEK 118 (413)
T ss_dssp CSSHHHHHHHHHHHHHHC-----TTCEEEEEESSHHHHH-HHHHTTCSS
T ss_pred CCChHHHHHHHHHHHHhC-----CCCeEEEEECCHHHHH-HHHHCCCCE
Confidence 653222334445555553 2222334444544443 355667654
No 91
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=95.06 E-value=0.081 Score=45.34 Aligned_cols=101 Identities=16% Similarity=0.082 Sum_probs=62.8
Q ss_pred ccEEEEEcC----cHHHHHHHHHHHHcCCcEEEEecC--CCCCC---ccccc------cCeeEEcCCCCCCCCCCCHHHH
Q 009903 71 QEKILVANR----GEIAVRVIRTAHEMGIPCVAVYST--IDKDA---LHVKL------ADESVCIGEAPSSQSYLLIPNV 135 (523)
Q Consensus 71 ~k~ILi~g~----g~~~~~vi~aa~~~G~~vi~v~~~--~~~~~---~~~~~------ad~~~~~~~~~~~~~~~~~~~l 135 (523)
.++|.|+|. |..|..+++.+.+.|++++-+++. .+... .+.++ .|-.+..-+ ......+
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~vp------~~~~~~v 86 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRP------PSALMDH 86 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSC------HHHHTTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEeC------HHHHHHH
Confidence 468999998 568999999999999998888654 22110 00011 222222110 1112234
Q ss_pred HHHHHHcCCCEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHH
Q 009903 136 LSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSI 179 (523)
Q Consensus 136 ~~~~~~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~ 179 (523)
++.+.+.++..++...++. ...+.+.+++.|++++||+--.+
T Consensus 87 ~~~~~~~gi~~i~~~~g~~--~~~~~~~a~~~Gir~vgpnc~g~ 128 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQSGIR--HPEFEKALKEAGIPVVADRCLMV 128 (140)
T ss_dssp HHHHHHHCCSCEEECTTCC--CHHHHHHHHHTTCCEEESCCHHH
T ss_pred HHHHHHcCCCEEEEcCCcC--HHHHHHHHHHcCCEEEcCCccce
Confidence 4445556777777666553 46778889999999998764433
No 92
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=94.88 E-value=0.074 Score=48.90 Aligned_cols=75 Identities=11% Similarity=0.013 Sum_probs=49.7
Q ss_pred CCccEEEEEcC-cHHHHHHHHHHH-HcCCcEEEEecCCC-CCCccc-cccC-eeEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009903 69 CRQEKILVANR-GEIAVRVIRTAH-EMGIPCVAVYSTID-KDALHV-KLAD-ESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (523)
Q Consensus 69 ~~~k~ILi~g~-g~~~~~vi~aa~-~~G~~vi~v~~~~~-~~~~~~-~~ad-~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 143 (523)
.|||+|||+|+ |.+|..+++.+. +.|++|+++..+.+ ...... .... ..+.. +..+.+.+.++++ +
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~d~~~~~~~~~--~ 73 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEG-------SFQNPGXLEQAVT--N 73 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEEC-------CTTCHHHHHHHHT--T
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEEC-------CCCCHHHHHHHHc--C
Confidence 46778999995 889999999999 89999999864432 111100 1111 22222 4667778877774 6
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.|+-..+
T Consensus 74 ~d~vv~~ag 82 (221)
T 3r6d_A 74 AEVVFVGAM 82 (221)
T ss_dssp CSEEEESCC
T ss_pred CCEEEEcCC
Confidence 899986543
No 93
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=94.82 E-value=0.11 Score=51.99 Aligned_cols=81 Identities=7% Similarity=-0.149 Sum_probs=50.9
Q ss_pred CccCCCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCC--Ccccccc--------C--eeEEcCCCCCCCCCCC
Q 009903 65 LKVTCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKD--ALHVKLA--------D--ESVCIGEAPSSQSYLL 131 (523)
Q Consensus 65 ~~~~~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~--~~~~~~a--------d--~~~~~~~~~~~~~~~~ 131 (523)
.....|+|+|||+|+ |.+|..+++.+.+.|++|++++...... .....+. . +.+.. +..+
T Consensus 18 ~~~~~M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-------Dl~d 90 (375)
T 1t2a_A 18 YFQGHMRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG-------DLTD 90 (375)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEEC-------CTTC
T ss_pred hhHhhcCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEc-------cCCC
Confidence 444556689999996 8899999999999999999986443221 0011110 1 12222 4667
Q ss_pred HHHHHHHHHHcCCCEEEeCCC
Q 009903 132 IPNVLSAAISRGCTMLHPGYG 152 (523)
Q Consensus 132 ~~~l~~~~~~~~id~Vi~~~g 152 (523)
.+.+.++++..++|.|+-..+
T Consensus 91 ~~~~~~~~~~~~~d~vih~A~ 111 (375)
T 1t2a_A 91 STCLVKIINEVKPTEIYNLGA 111 (375)
T ss_dssp HHHHHHHHHHHCCSEEEECCS
T ss_pred HHHHHHHHHhcCCCEEEECCC
Confidence 788888887778999886543
No 94
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.71 E-value=0.15 Score=49.76 Aligned_cols=121 Identities=13% Similarity=0.165 Sum_probs=74.4
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCC-CCCCccc--------cccCeeEEcCCCCCCCCCCCHHHHHHHH
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI-DKDALHV--------KLADESVCIGEAPSSQSYLLIPNVLSAA 139 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~-~~~~~~~--------~~ad~~~~~~~~~~~~~~~~~~~l~~~~ 139 (523)
|+|+|||+|+ |.+|..+++.+.+.|++|++++.+. ....+.. ...-+.+.. |..+.+.+.+++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~-------D~~d~~~l~~a~ 75 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEG-------EMEEHEKMVSVL 75 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEEC-------CTTCHHHHHHHH
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEe-------cCCCHHHHHHHH
Confidence 3568999996 8899999999999999999986443 1100000 001122332 467788888877
Q ss_pred HHcCCCEEEeCCCccc--ccHHHHHHHHHcC-CceeCCCH------------HHHHHhCCHHHHHHHHHHCCCCC
Q 009903 140 ISRGCTMLHPGYGFLA--ENAVFVEMCREHG-INFIGPNP------------DSIRIMGDKSTARETMKNAGVPT 199 (523)
Q Consensus 140 ~~~~id~Vi~~~g~~~--e~~~~a~~~~~~g-l~~~g~~~------------~~~~~~~dK~~~r~~l~~~Gip~ 199 (523)
+ ++|.|+-..+... ....+.+.+.+.| ++.+-.+. ........|....+++++.|++.
T Consensus 76 ~--~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~ 148 (321)
T 3c1o_A 76 K--QVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPY 148 (321)
T ss_dssp T--TCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHHHHHHHHHHHHHHHTCCB
T ss_pred c--CCCEEEECCCccchhhHHHHHHHHHHhCCccEEeccccccCccccccCCCcchHHHHHHHHHHHHHHcCCCe
Confidence 5 5999987654321 2246667777777 53221111 00112256888888888888764
No 95
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=94.69 E-value=0.23 Score=48.17 Aligned_cols=69 Identities=14% Similarity=0.142 Sum_probs=45.7
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
|+|+|||+|+ |.+|..+++.+.+.|++|++++....... .. .-+.+.. +.. .+.+.++.+ ++|.|+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-~~~~~~~-------Dl~-~~~~~~~~~--~~d~Vi 67 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-DYEYRVS-------DYT-LEDLINQLN--DVDAVV 67 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEEC-------CCC-HHHHHHHTT--TCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-ceEEEEc-------ccc-HHHHHHhhc--CCCEEE
Confidence 6789999995 88999999999999999999965422111 11 1122222 344 666666665 799988
Q ss_pred eCC
Q 009903 149 PGY 151 (523)
Q Consensus 149 ~~~ 151 (523)
-..
T Consensus 68 h~a 70 (311)
T 3m2p_A 68 HLA 70 (311)
T ss_dssp ECC
T ss_pred Ecc
Confidence 653
No 96
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.60 E-value=0.048 Score=50.38 Aligned_cols=88 Identities=9% Similarity=-0.059 Sum_probs=52.7
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009903 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (523)
Q Consensus 72 k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~~ 151 (523)
|+|+|+|.|..|..+++.+.+.|+++++++.+++.........+..+..+ +..+.+.+.+. .-.+.|.|+.+.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~g------d~~~~~~l~~a-~i~~ad~vi~~~ 73 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHG------DGSHKEILRDA-EVSKNDVVVILT 73 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEES------CTTSHHHHHHH-TCCTTCEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEc------CCCCHHHHHhc-CcccCCEEEEec
Confidence 46999999999999999999999999999654332211111112223222 34455444433 234689998876
Q ss_pred CcccccHHHHHHHHH
Q 009903 152 GFLAENAVFVEMCRE 166 (523)
Q Consensus 152 g~~~e~~~~a~~~~~ 166 (523)
+....+..+...+..
T Consensus 74 ~~d~~n~~~~~~a~~ 88 (218)
T 3l4b_C 74 PRDEVNLFIAQLVMK 88 (218)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 543233334444444
No 97
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.57 E-value=0.15 Score=49.33 Aligned_cols=93 Identities=15% Similarity=0.222 Sum_probs=58.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCC-Cccc-----cc-cCeeEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKD-ALHV-----KL-ADESVCIGEAPSSQSYLLIPNVLSAAISR 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~-~~~~-----~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~~~ 142 (523)
+++|||+|+ |.+|..+++++.+.|++|+++..+.... .+.. .+ ......+ ..+..+.+.+.++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v-----~~D~~d~~~l~~~~~-- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV-----HGSIDDHASLVEAVK-- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEE-----CCCTTCHHHHHHHHH--
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEE-----EeccCCHHHHHHHHc--
Confidence 468999996 8899999999999999999885433211 0100 00 1111111 124667788887776
Q ss_pred CCCEEEeCCCccc--ccHHHHHHHHHcC-Cc
Q 009903 143 GCTMLHPGYGFLA--ENAVFVEMCREHG-IN 170 (523)
Q Consensus 143 ~id~Vi~~~g~~~--e~~~~a~~~~~~g-l~ 170 (523)
++|.|+-..+... ....+.+.+.+.| ++
T Consensus 77 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 107 (308)
T 1qyc_A 77 NVDVVISTVGSLQIESQVNIIKAIKEVGTVK 107 (308)
T ss_dssp TCSEEEECCCGGGSGGGHHHHHHHHHHCCCS
T ss_pred CCCEEEECCcchhhhhHHHHHHHHHhcCCCc
Confidence 5999987654321 1245667777777 64
No 98
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.50 E-value=0.078 Score=45.89 Aligned_cols=90 Identities=17% Similarity=0.176 Sum_probs=52.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCC--Ccccccc-CeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD--ALHVKLA-DESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~--~~~~~~a-d~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
.++|+|+|.|..|..+++.+.+.|++|++++.+.... ....... +..+..+ +..+.+.+.+. .-.+.|.|
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~g------d~~~~~~l~~a-~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPG------DSNDSSVLKKA-GIDRCRAI 75 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEES------CTTSHHHHHHH-TTTTCSEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEc------CCCCHHHHHHc-ChhhCCEE
Confidence 4689999999999999999999999999996432100 0000111 1122222 34555554443 22468999
Q ss_pred EeCCCcccccHHHHHHHHHc
Q 009903 148 HPGYGFLAENAVFVEMCREH 167 (523)
Q Consensus 148 i~~~g~~~e~~~~a~~~~~~ 167 (523)
+.+.+....+......+.++
T Consensus 76 i~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 76 LALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp EECSSCHHHHHHHHHHHHHH
T ss_pred EEecCChHHHHHHHHHHHHH
Confidence 88765332333444445444
No 99
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.49 E-value=0.21 Score=48.13 Aligned_cols=91 Identities=14% Similarity=0.156 Sum_probs=58.2
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCC-CCCCc-cc-----cc---cCeeEEcCCCCCCCCCCCHHHHHHHH
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI-DKDAL-HV-----KL---ADESVCIGEAPSSQSYLLIPNVLSAA 139 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~-~~~~~-~~-----~~---ad~~~~~~~~~~~~~~~~~~~l~~~~ 139 (523)
+++|||+|+ |.+|..+++++.+.|++|+++..+. ....+ .. .+ .-+.+.. +..+.+.+.+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~-------D~~d~~~l~~~~ 74 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEG-------DINDHETLVKAI 74 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEEC-------CTTCHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEe-------CCCCHHHHHHHH
Confidence 467999996 8899999999999999999986443 11111 00 00 1122332 466778887777
Q ss_pred HHcCCCEEEeCCCccc--ccHHHHHHHHHcC-Cc
Q 009903 140 ISRGCTMLHPGYGFLA--ENAVFVEMCREHG-IN 170 (523)
Q Consensus 140 ~~~~id~Vi~~~g~~~--e~~~~a~~~~~~g-l~ 170 (523)
+ ++|.|+-..+... ....+.+.+.+.| ++
T Consensus 75 ~--~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 106 (307)
T 2gas_A 75 K--QVDIVICAAGRLLIEDQVKIIKAIKEAGNVK 106 (307)
T ss_dssp T--TCSEEEECSSSSCGGGHHHHHHHHHHHCCCS
T ss_pred h--CCCEEEECCcccccccHHHHHHHHHhcCCce
Confidence 5 5999987654321 1235667777777 64
No 100
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=94.44 E-value=0.13 Score=50.34 Aligned_cols=73 Identities=10% Similarity=0.028 Sum_probs=49.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccC--eeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
||+|||+|+ |.+|..+++.+.+.|++|++++....... ..+.. +.+.. +..+.+.+.++.++.++|.|
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~d~v 71 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE--DAITEGAKFYNG-------DLRDKAFLRDVFTQENIEAV 71 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG--GGSCTTSEEEEC-------CTTCHHHHHHHHHHSCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch--hhcCCCcEEEEC-------CCCCHHHHHHHHhhcCCCEE
Confidence 468999985 88999999999999999999864322211 11111 22322 36677888888776689998
Q ss_pred EeCCC
Q 009903 148 HPGYG 152 (523)
Q Consensus 148 i~~~g 152 (523)
+-..+
T Consensus 72 ih~a~ 76 (330)
T 2c20_A 72 MHFAA 76 (330)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 86543
No 101
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=94.39 E-value=0.17 Score=50.68 Aligned_cols=101 Identities=12% Similarity=-0.018 Sum_probs=53.5
Q ss_pred CccEEEEEcCcHH-----HHHHHHHHHHcCCcEEEEecCCCCCCcccccc-CeeEEcCCCC-----CCCCCCC-------
Q 009903 70 RQEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYSTIDKDALHVKLA-DESVCIGEAP-----SSQSYLL------- 131 (523)
Q Consensus 70 ~~k~ILi~g~g~~-----~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~a-d~~~~~~~~~-----~~~~~~~------- 131 (523)
|+++|+|.|+|.. +..+++++++.|++|.++.+..........-. -.+..++... .......
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKS 80 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHH
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHH
Confidence 7889999988753 57799999999999998864321111000111 1122222110 0000111
Q ss_pred HHHHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHcCCcee
Q 009903 132 IPNVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 132 ~~~l~~~~~~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
......+.++.++|.|+...++.+ ....-.+..+|+|++
T Consensus 81 ~~~~~~~l~~~~PDvVi~~g~~~s--~p~~laA~~~~iP~v 119 (365)
T 3s2u_A 81 LFQALRVIRQLRPVCVLGLGGYVT--GPGGLAARLNGVPLV 119 (365)
T ss_dssp HHHHHHHHHHHCCSEEEECSSSTH--HHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhcCCCEEEEcCCcch--HHHHHHHHHcCCCEE
Confidence 123345678899999997655432 222233556788876
No 102
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=94.34 E-value=0.095 Score=50.78 Aligned_cols=73 Identities=12% Similarity=0.035 Sum_probs=51.1
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHc--CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~--G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~ 146 (523)
|.|+|||+|+ |.+|..+++.+.+. |++|++++....... ... .-+.+.. +..+.+.+.+++++.++|.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~-~~~~~~~-------D~~d~~~~~~~~~~~~~d~ 71 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VVN-SGPFEVV-------NALDFNQIEHLVEVHKITD 71 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HHH-SSCEEEC-------CTTCHHHHHHHHHHTTCCE
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-ccC-CCceEEe-------cCCCHHHHHHHHhhcCCCE
Confidence 4578999997 88999999999999 999999864332211 000 0122332 4667888888888778999
Q ss_pred EEeCC
Q 009903 147 LHPGY 151 (523)
Q Consensus 147 Vi~~~ 151 (523)
|+-..
T Consensus 72 vih~a 76 (312)
T 2yy7_A 72 IYLMA 76 (312)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 98554
No 103
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=94.33 E-value=0.15 Score=49.53 Aligned_cols=75 Identities=8% Similarity=-0.001 Sum_probs=50.3
Q ss_pred cCCCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009903 67 VTCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (523)
Q Consensus 67 ~~~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id 145 (523)
-.+.+++|||+|+ |.+|..+++.+.+.|++|++++..... .. +.-..+.. +..+.+.+.++++..++|
T Consensus 8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~~~~~~-------Dl~d~~~~~~~~~~~~~d 76 (321)
T 2pk3_A 8 HHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNVEMISL-------DIMDSQRVKKVISDIKPD 76 (321)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTEEEEEC-------CTTCHHHHHHHHHHHCCS
T ss_pred cccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---ceeeEEEC-------CCCCHHHHHHHHHhcCCC
Confidence 3445788999986 789999999999999999998644332 11 11122222 366778888888777799
Q ss_pred EEEeCCC
Q 009903 146 MLHPGYG 152 (523)
Q Consensus 146 ~Vi~~~g 152 (523)
.|+-..+
T Consensus 77 ~vih~A~ 83 (321)
T 2pk3_A 77 YIFHLAA 83 (321)
T ss_dssp EEEECCS
T ss_pred EEEEcCc
Confidence 9886543
No 104
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=94.31 E-value=0.16 Score=50.87 Aligned_cols=77 Identities=4% Similarity=-0.198 Sum_probs=50.8
Q ss_pred CCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCC--cccccc---------C-eeEEcCCCCCCCCCCCHHHH
Q 009903 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDA--LHVKLA---------D-ESVCIGEAPSSQSYLLIPNV 135 (523)
Q Consensus 69 ~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~--~~~~~a---------d-~~~~~~~~~~~~~~~~~~~l 135 (523)
.|+|+|||+|+ |.+|..+++.+.+.|++|++++....... ....+. . ..+.. +..+.+.+
T Consensus 26 ~M~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~ 98 (381)
T 1n7h_A 26 EPRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYA-------DLTDASSL 98 (381)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEEC-------CTTCHHHH
T ss_pred hhCCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEEC-------CCCCHHHH
Confidence 45589999997 88999999999999999999864432210 011111 1 12222 46677788
Q ss_pred HHHHHHcCCCEEEeCCC
Q 009903 136 LSAAISRGCTMLHPGYG 152 (523)
Q Consensus 136 ~~~~~~~~id~Vi~~~g 152 (523)
.++++..++|.|+-..+
T Consensus 99 ~~~~~~~~~d~Vih~A~ 115 (381)
T 1n7h_A 99 RRWIDVIKPDEVYNLAA 115 (381)
T ss_dssp HHHHHHHCCSEEEECCS
T ss_pred HHHHHhcCCCEEEECCc
Confidence 88877768999886543
No 105
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=94.30 E-value=0.35 Score=47.54 Aligned_cols=75 Identities=11% Similarity=-0.051 Sum_probs=49.3
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcC--CcEEEEecCCCCCCc-c-ccc---cC-eeEEcCCCCCCCCCCCHHHHHHHHH
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMG--IPCVAVYSTIDKDAL-H-VKL---AD-ESVCIGEAPSSQSYLLIPNVLSAAI 140 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G--~~vi~v~~~~~~~~~-~-~~~---ad-~~~~~~~~~~~~~~~~~~~l~~~~~ 140 (523)
++|+|||+|+ |.+|..+++.|.+.| ++|++++........ . ..+ .. +.+.. +..+.+.+.++++
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~ 95 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKG-------EIQNGELLEHVIK 95 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEEC-------CTTCHHHHHHHHH
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEc-------CCCCHHHHHHHHh
Confidence 3578999997 889999999999999 666666432211110 0 001 11 12222 4678888888888
Q ss_pred HcCCCEEEeCC
Q 009903 141 SRGCTMLHPGY 151 (523)
Q Consensus 141 ~~~id~Vi~~~ 151 (523)
..++|.|+-..
T Consensus 96 ~~~~d~Vih~A 106 (346)
T 4egb_A 96 ERDVQVIVNFA 106 (346)
T ss_dssp HHTCCEEEECC
T ss_pred hcCCCEEEECC
Confidence 88899998553
No 106
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.23 E-value=0.19 Score=50.19 Aligned_cols=73 Identities=15% Similarity=0.053 Sum_probs=48.4
Q ss_pred CCccEEEEEcC-cHHHHHHHHHHHHc-CCcEEEEecCCCCCCccccccC-eeEEcCCCCCCCCCC-CHHHHHHHHHHcCC
Q 009903 69 CRQEKILVANR-GEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLAD-ESVCIGEAPSSQSYL-LIPNVLSAAISRGC 144 (523)
Q Consensus 69 ~~~k~ILi~g~-g~~~~~vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad-~~~~~~~~~~~~~~~-~~~~l~~~~~~~~i 144 (523)
.++|+|||+|+ |.+|..+++.|.+. |++|++++.............. +.+.. +.. +.+.+.++++ ++
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~-------Dl~~d~~~~~~~~~--~~ 92 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEG-------DITINKEWVEYHVK--KC 92 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEEC-------CTTTCHHHHHHHHH--HC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeC-------ccCCCHHHHHHHhc--cC
Confidence 34689999995 88999999999998 9999999654332221111111 22222 355 6777777776 49
Q ss_pred CEEEeC
Q 009903 145 TMLHPG 150 (523)
Q Consensus 145 d~Vi~~ 150 (523)
|.|+-.
T Consensus 93 d~Vih~ 98 (372)
T 3slg_A 93 DVILPL 98 (372)
T ss_dssp SEEEEC
T ss_pred CEEEEc
Confidence 998853
No 107
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=94.21 E-value=0.24 Score=47.98 Aligned_cols=93 Identities=16% Similarity=0.202 Sum_probs=58.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccc-----cc-cCeeEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-----KL-ADESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-----~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 143 (523)
+++|||+|+ |.+|..+++.+.+.|++|+++..+.....+.. .+ ......+ ..+..+.+.+.++++ +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~-----~~D~~d~~~l~~~~~--~ 76 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI-----EASLDDHQRLVDALK--Q 76 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEE-----CCCSSCHHHHHHHHT--T
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEE-----eCCCCCHHHHHHHHh--C
Confidence 467999996 88999999999999999999864432110100 01 1111111 124677888887775 5
Q ss_pred CCEEEeCCCccc------ccHHHHHHHHHcC-Cc
Q 009903 144 CTMLHPGYGFLA------ENAVFVEMCREHG-IN 170 (523)
Q Consensus 144 id~Vi~~~g~~~------e~~~~a~~~~~~g-l~ 170 (523)
+|.|+-..+... ....+.+.+.+.| ++
T Consensus 77 ~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~ 110 (313)
T 1qyd_A 77 VDVVISALAGGVLSHHILEQLKLVEAIKEAGNIK 110 (313)
T ss_dssp CSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCS
T ss_pred CCEEEECCccccchhhHHHHHHHHHHHHhcCCCc
Confidence 999987654321 1135667777777 64
No 108
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=94.20 E-value=0.12 Score=49.43 Aligned_cols=61 Identities=7% Similarity=0.040 Sum_probs=47.3
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
|+++|||+|+ |.+|..+++.+.+.|++|++++.. ..+..+.+.+.++.+..++|.|+
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~~~d~vi 61 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------LLDITNISQVQQVVQEIRPHIII 61 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------TSCTTCHHHHHHHHHHHCCSEEE
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------ccCCCCHHHHHHHHHhcCCCEEE
Confidence 4449999996 889999999999999999998420 02356778888888877899998
Q ss_pred eCCC
Q 009903 149 PGYG 152 (523)
Q Consensus 149 ~~~g 152 (523)
-..+
T Consensus 62 ~~a~ 65 (287)
T 3sc6_A 62 HCAA 65 (287)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 6543
No 109
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=94.19 E-value=0.18 Score=49.46 Aligned_cols=79 Identities=13% Similarity=-0.039 Sum_probs=49.8
Q ss_pred ccCCCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc--cccc--cC--eeEEcCCCCCCCCCCCHHHHHHH
Q 009903 66 KVTCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL--HVKL--AD--ESVCIGEAPSSQSYLLIPNVLSA 138 (523)
Q Consensus 66 ~~~~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~--~~~~--ad--~~~~~~~~~~~~~~~~~~~l~~~ 138 (523)
...-++++|||+|+ |.+|..+++.+.+.|++|++++........ ...+ .. ..+.. +..+.+.+.++
T Consensus 9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~ 81 (335)
T 1rpn_A 9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDG-------DMADACSVQRA 81 (335)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEEC-------CTTCHHHHHHH
T ss_pred cccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEEC-------CCCCHHHHHHH
Confidence 34455788999996 889999999999999999998644322110 0001 11 12222 36677888888
Q ss_pred HHHcCCCEEEeCC
Q 009903 139 AISRGCTMLHPGY 151 (523)
Q Consensus 139 ~~~~~id~Vi~~~ 151 (523)
++..++|.|+-..
T Consensus 82 ~~~~~~d~Vih~A 94 (335)
T 1rpn_A 82 VIKAQPQEVYNLA 94 (335)
T ss_dssp HHHHCCSEEEECC
T ss_pred HHHcCCCEEEECc
Confidence 8777899988554
No 110
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.16 E-value=0.055 Score=50.29 Aligned_cols=33 Identities=30% Similarity=0.359 Sum_probs=30.1
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.++|||+|+|..|...++.+.+.|.+|+++.++
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 578999999999999999999999999999543
No 111
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.15 E-value=0.039 Score=49.36 Aligned_cols=34 Identities=12% Similarity=0.175 Sum_probs=30.3
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTI 104 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~-G~~vi~v~~~~ 104 (523)
.++|+|+|.|..|..+++.+++. |++|++++.+.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 46899999999999999999999 99999996543
No 112
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.14 E-value=0.15 Score=46.81 Aligned_cols=71 Identities=14% Similarity=0.146 Sum_probs=48.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
||+|||+|+ |.+|..+++.+.+.|++|++++.+..... .+......+. .+..+.+.+.++++ ++|.|+-
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~-----~Dl~d~~~~~~~~~--~~d~vi~ 73 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK---IENEHLKVKK-----ADVSSLDEVCEVCK--GADAVIS 73 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCC---CCCTTEEEEC-----CCTTCHHHHHHHHT--TCSEEEE
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccch---hccCceEEEE-----ecCCCHHHHHHHhc--CCCEEEE
Confidence 578999996 78999999999999999999964432211 1112222111 24667888888775 5999885
Q ss_pred CC
Q 009903 150 GY 151 (523)
Q Consensus 150 ~~ 151 (523)
..
T Consensus 74 ~a 75 (227)
T 3dhn_A 74 AF 75 (227)
T ss_dssp CC
T ss_pred eC
Confidence 43
No 113
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.94 E-value=0.082 Score=44.47 Aligned_cols=32 Identities=19% Similarity=0.260 Sum_probs=29.0
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 72 k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
++|+|+|.|..|..+++.+.+.|++|++++.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 58999999999999999999999999998643
No 114
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=93.93 E-value=0.24 Score=49.74 Aligned_cols=74 Identities=18% Similarity=0.143 Sum_probs=49.2
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
++|+|||+|+ |.+|..+++.+.+.|++|++++.............-+.+.. +..+.+.+.++++ ++|.|+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~-------Dl~d~~~~~~~~~--~~d~Vi 98 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLV-------DLRVMENCLKVTE--GVDHVF 98 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEEC-------CTTSHHHHHHHHT--TCSEEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEEC-------CCCCHHHHHHHhC--CCCEEE
Confidence 4678999997 88999999999999999999864433221111001122332 3667777777764 699988
Q ss_pred eCCC
Q 009903 149 PGYG 152 (523)
Q Consensus 149 ~~~g 152 (523)
-..+
T Consensus 99 h~A~ 102 (379)
T 2c5a_A 99 NLAA 102 (379)
T ss_dssp ECCC
T ss_pred ECce
Confidence 6543
No 115
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=93.76 E-value=0.1 Score=52.35 Aligned_cols=116 Identities=8% Similarity=0.026 Sum_probs=74.0
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
.|||+|+|+|..|..+++.+.+ .+++.+.+.+..........+ ..+.++ ..|.+.+.++++ +.|+|+.+
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~-~~~~~d-------~~d~~~l~~~~~--~~DvVi~~ 84 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFA-TPLKVD-------ASNFDKLVEVMK--EFELVIGA 84 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTS-EEEECC-------TTCHHHHHHHHT--TCSEEEEC
T ss_pred ccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccC-CcEEEe-------cCCHHHHHHHHh--CCCEEEEe
Confidence 3479999999999999999866 578887753322111111222 223343 567888888876 48999987
Q ss_pred CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCC
Q 009903 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (523)
Q Consensus 151 ~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~ 202 (523)
.+.. -...+++.|.+.|.+++-.+... ..-..+.+..+++|+.....
T Consensus 85 ~p~~-~~~~v~~~~~~~g~~yvD~s~~~----~~~~~l~~~a~~~g~~~i~~ 131 (365)
T 3abi_A 85 LPGF-LGFKSIKAAIKSKVDMVDVSFMP----ENPLELRDEAEKAQVTIVFD 131 (365)
T ss_dssp CCGG-GHHHHHHHHHHHTCEEEECCCCS----SCGGGGHHHHHHTTCEEECC
T ss_pred cCCc-ccchHHHHHHhcCcceEeeeccc----hhhhhhhhhhccCCceeeec
Confidence 6543 34678899999999887433111 11123456677888765543
No 116
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=93.61 E-value=0.13 Score=50.70 Aligned_cols=76 Identities=16% Similarity=0.020 Sum_probs=50.7
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCC------CCc-cccc----cC--eeEEcCCCCCCCCCCCHHHH
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDK------DAL-HVKL----AD--ESVCIGEAPSSQSYLLIPNV 135 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~------~~~-~~~~----ad--~~~~~~~~~~~~~~~~~~~l 135 (523)
|+|+|||+|+ |.+|..+++.+.+.|++|++++..... ... ...+ .. +.+.. +..+.+.+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-------D~~~~~~~ 73 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEM-------DILDQGAL 73 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEEC-------CTTCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEEC-------CCCCHHHH
Confidence 5689999985 889999999999999999998543221 000 0000 11 22332 36677788
Q ss_pred HHHHHHcCCCEEEeCCC
Q 009903 136 LSAAISRGCTMLHPGYG 152 (523)
Q Consensus 136 ~~~~~~~~id~Vi~~~g 152 (523)
.++++..++|.|+-..+
T Consensus 74 ~~~~~~~~~d~vih~A~ 90 (348)
T 1ek6_A 74 QRLFKKYSFMAVIHFAG 90 (348)
T ss_dssp HHHHHHCCEEEEEECCS
T ss_pred HHHHHhcCCCEEEECCC
Confidence 88777668998885543
No 117
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.61 E-value=0.044 Score=52.55 Aligned_cols=35 Identities=14% Similarity=0.106 Sum_probs=30.4
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|+|+|||+|+|.+|..+++.+.+.|++|+++..+
T Consensus 3 ~m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 3 AMTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp --CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESC
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcC
Confidence 47789999999999999999999999999999643
No 118
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=93.60 E-value=0.28 Score=46.07 Aligned_cols=72 Identities=15% Similarity=0.108 Sum_probs=47.6
Q ss_pred CCCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009903 68 TCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (523)
Q Consensus 68 ~~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~---- 142 (523)
..|.|++||+|+ +.+|..+++.+.+.|++|++++.+..... ...+.++ ..+.+.+.+++++.
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~d-------~~d~~~v~~~~~~~~~~~ 85 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------DHSFTIK-------DSGEEEIKSVIEKINSKS 85 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------SEEEECS-------CSSHHHHHHHHHHHHTTT
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------ccceEEE-------eCCHHHHHHHHHHHHHHc
Confidence 356789999996 67899999999999999999865443221 2233332 45556666555543
Q ss_pred -CCCEEEeCCC
Q 009903 143 -GCTMLHPGYG 152 (523)
Q Consensus 143 -~id~Vi~~~g 152 (523)
++|.|+-..+
T Consensus 86 g~iD~li~~Ag 96 (251)
T 3orf_A 86 IKVDTFVCAAG 96 (251)
T ss_dssp CCEEEEEECCC
T ss_pred CCCCEEEECCc
Confidence 6788886544
No 119
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=93.59 E-value=0.19 Score=48.43 Aligned_cols=72 Identities=21% Similarity=0.013 Sum_probs=49.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcC-CcEEEEecCCCCCCccccc---cCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMG-IPCVAVYSTIDKDALHVKL---ADESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G-~~vi~v~~~~~~~~~~~~~---ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id 145 (523)
+|+|||+|+ |.+|..+++.+.+.| ++|+++..+..... ...+ .-+.+.. +..+.+.+.+.++ ++|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~-~~~l~~~~~~~~~~-------D~~d~~~l~~~~~--~~d 74 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA-AKELRLQGAEVVQG-------DQDDQVIMELALN--GAY 74 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH-HHHHHHTTCEEEEC-------CTTCHHHHHHHHT--TCS
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH-HHHHHHCCCEEEEe-------cCCCHHHHHHHHh--cCC
Confidence 578999997 889999999999999 99999864433210 0011 1122332 4677788877765 599
Q ss_pred EEEeCCC
Q 009903 146 MLHPGYG 152 (523)
Q Consensus 146 ~Vi~~~g 152 (523)
.|+-..+
T Consensus 75 ~vi~~a~ 81 (299)
T 2wm3_A 75 ATFIVTN 81 (299)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 9987644
No 120
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=93.57 E-value=0.28 Score=48.15 Aligned_cols=75 Identities=13% Similarity=-0.001 Sum_probs=50.3
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccc-cccC-eeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLAD-ESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-~~ad-~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
+|+|||+|+ |.+|..+++.+.+.|++|++++.......... .+.. ..+.. +..+.+.+.++++..++|.|
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~D~v 93 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEG-------SIADHALVNQLIGDLQPDAV 93 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEEC-------CTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEE-------eCCCHHHHHHHHhccCCcEE
Confidence 578999995 88999999999999999999864322111001 1111 12222 46677788887776679999
Q ss_pred EeCCC
Q 009903 148 HPGYG 152 (523)
Q Consensus 148 i~~~g 152 (523)
+-..+
T Consensus 94 ih~A~ 98 (333)
T 2q1w_A 94 VHTAA 98 (333)
T ss_dssp EECCC
T ss_pred EECce
Confidence 86543
No 121
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=93.57 E-value=0.2 Score=48.46 Aligned_cols=33 Identities=15% Similarity=0.179 Sum_probs=28.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~ 80 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLD 80 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999996 678999999999999999988543
No 122
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus}
Probab=93.51 E-value=0.08 Score=54.65 Aligned_cols=70 Identities=20% Similarity=0.288 Sum_probs=50.4
Q ss_pred CCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEeCCCCCCCceEE--eCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccC
Q 009903 196 GVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRL--AKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQ 273 (523)
Q Consensus 196 Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP~~g~gs~Gv~~--v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~ 273 (523)
=++..++ ..+.+.++...++++.. -+||||+.|.||.|+.+ --+.++++++.+++... ...+++|++++
T Consensus 340 il~~VpT--~~c~~~~~~~~vl~~l~-~lViKp~~g~gg~gv~iG~~~s~~e~~~~~~~i~~~------p~~yIaQe~v~ 410 (474)
T 3n6x_A 340 ILSNVPT--YQLSKADDLKYVLDNLA-ELVVKEVQGSGGYGMLVGPAASKQELEDFRQRILAN------PANYIAQPTLA 410 (474)
T ss_dssp SSEECCC--EETTSHHHHHHHHHSGG-GEEEEECCCE-----EEGGGCCHHHHHHHHHHHHHS------GGGEEEEECCC
T ss_pred hccCCCc--eecCCHHHHHHHHhchh-heEEEecCCCCCCceEECCcCCHHHHHHHHHHHHhC------CCCEEEeeccC
Confidence 3455566 45788888888887776 79999999999999988 46788888888777653 25699999998
Q ss_pred C
Q 009903 274 N 274 (523)
Q Consensus 274 G 274 (523)
-
T Consensus 411 l 411 (474)
T 3n6x_A 411 L 411 (474)
T ss_dssp C
T ss_pred C
Confidence 6
No 123
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=93.49 E-value=0.42 Score=45.67 Aligned_cols=72 Identities=10% Similarity=-0.014 Sum_probs=48.8
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHc-CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 72 EKILVANR-GEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
|+|||+|+ |.+|..+++.+.+. |++|+++..+.+.........-+.+.. |..|.+.+.++.+ ++|.|+-
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~-------D~~d~~~l~~~~~--~~d~vi~ 71 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQL-------DYFNQESMVEAFK--GMDTVVF 71 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEEC-------CTTCHHHHHHHTT--TCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEc-------CCCCHHHHHHHHh--CCCEEEE
Confidence 36999996 88999999999998 999999965443222111111223333 4677788877765 6899986
Q ss_pred CCC
Q 009903 150 GYG 152 (523)
Q Consensus 150 ~~g 152 (523)
..+
T Consensus 72 ~a~ 74 (289)
T 3e48_A 72 IPS 74 (289)
T ss_dssp CCC
T ss_pred eCC
Confidence 544
No 124
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=93.49 E-value=0.24 Score=48.55 Aligned_cols=77 Identities=10% Similarity=-0.019 Sum_probs=51.5
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcccc-c----cCeeEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-L----ADESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~-~----ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 143 (523)
++|+|||+|+ |.+|..+++.+.+.|++|++++........... + ......+ ..+..+.+.+.++++..+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~~~~~~~ 78 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFH-----ETDVSDERALARIFDAHP 78 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEE-----CCCTTCHHHHHHHHHHSC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEE-----EeecCCHHHHHHHHhccC
Confidence 3578999995 789999999999999999998543332211110 0 0111111 124667888888888778
Q ss_pred CCEEEeCC
Q 009903 144 CTMLHPGY 151 (523)
Q Consensus 144 id~Vi~~~ 151 (523)
+|.|+-.-
T Consensus 79 ~d~vih~A 86 (341)
T 3enk_A 79 ITAAIHFA 86 (341)
T ss_dssp CCEEEECC
T ss_pred CcEEEECc
Confidence 99988554
No 125
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=93.45 E-value=0.19 Score=51.25 Aligned_cols=123 Identities=11% Similarity=0.067 Sum_probs=73.6
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCC---cEEEEecCCCCCCc-ccccc------CeeEEcCCCCCCCCCCCHHHHHHHHH
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGI---PCVAVYSTIDKDAL-HVKLA------DESVCIGEAPSSQSYLLIPNVLSAAI 140 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~---~vi~v~~~~~~~~~-~~~~a------d~~~~~~~~~~~~~~~~~~~l~~~~~ 140 (523)
|++|+|+|+|.+|..+++.+.+.|. .+++++.+.+.... ...+. -..+.+ +..+.+.+.++++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~-------D~~d~~~l~~~l~ 73 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTV-------DADSIEELVALIN 73 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEEC-------CTTCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEe-------cCCCHHHHHHHHH
Confidence 4689999999999999999999983 67776533221110 01111 112223 3556778888888
Q ss_pred HcCCCEEEeCCCcccccHHHHHHHHHcCCceeCC-CHHHH--HH--hCCHHHHHHHHHHCCCCCCC
Q 009903 141 SRGCTMLHPGYGFLAENAVFVEMCREHGINFIGP-NPDSI--RI--MGDKSTARETMKNAGVPTVP 201 (523)
Q Consensus 141 ~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~-~~~~~--~~--~~dK~~~r~~l~~~Gip~p~ 201 (523)
+.++|.|+.+.+.. ....+.+.+.+.|..++-. +.... .. ......+.+.++++|+....
T Consensus 74 ~~~~DvVin~ag~~-~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~ 138 (405)
T 4ina_A 74 EVKPQIVLNIALPY-QDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALL 138 (405)
T ss_dssp HHCCSEEEECSCGG-GHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEE
T ss_pred hhCCCEEEECCCcc-cChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEE
Confidence 77899999776543 2356677788888887621 11100 00 00012456677788887433
No 126
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=93.29 E-value=0.67 Score=45.22 Aligned_cols=93 Identities=15% Similarity=0.098 Sum_probs=60.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHH-----HHcCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAA-----ISRGC 144 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~i 144 (523)
|.+|.|+|. |..+...++++++.|.+++.+. +.+... ...+.. + +...-+.+.+++++.+ .+..+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~-d~~~~~--~~~~~~-~-----~~~~~~~~~~~ll~~~~~l~~~~~~v 73 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASL-DPATNV--GLVDSF-F-----PEAEFFTEPEAFEAYLEDLRDRGEGV 73 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEE-CSSCCC--GGGGGT-C-----TTCEEESCHHHHHHHHHHHHHTTCCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEE-cCCHHH--HHHHhh-C-----CCCceeCCHHHHHHHhhhhcccCCCC
Confidence 578999998 6788899999999999888775 333222 112211 1 1112356788887655 45679
Q ss_pred CEEEeCCCcccccHHHHHHHHHcCCceeC
Q 009903 145 TMLHPGYGFLAENAVFVEMCREHGINFIG 173 (523)
Q Consensus 145 d~Vi~~~g~~~e~~~~a~~~~~~gl~~~g 173 (523)
|+|+.+... .....++..+.+.|.+++.
T Consensus 74 D~V~I~tP~-~~H~~~~~~al~aGkhVl~ 101 (312)
T 3o9z_A 74 DYLSIASPN-HLHYPQIRMALRLGANALS 101 (312)
T ss_dssp SEEEECSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred cEEEECCCc-hhhHHHHHHHHHCCCeEEE
Confidence 999876532 1335667777788887763
No 127
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=93.26 E-value=0.1 Score=50.78 Aligned_cols=67 Identities=10% Similarity=-0.013 Sum_probs=40.0
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
|.|+|||+|+ |.+|..+++.+.+.|++|++++..... .. .+.. +..+.+.+.++++..++|.|+
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~-~~~~-------Dl~d~~~~~~~~~~~~~d~vi 65 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------PK-FEQV-------NLLDSNAVHHIIHDFQPHVIV 65 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------CHHHHHHHCCSEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------CC-eEEe-------cCCCHHHHHHHHHhhCCCEEE
Confidence 4679999997 889999999999999999998532221 01 2222 244455566666655799988
Q ss_pred eCC
Q 009903 149 PGY 151 (523)
Q Consensus 149 ~~~ 151 (523)
-..
T Consensus 66 h~A 68 (315)
T 2ydy_A 66 HCA 68 (315)
T ss_dssp ECC
T ss_pred ECC
Confidence 543
No 128
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.25 E-value=0.33 Score=44.36 Aligned_cols=69 Identities=10% Similarity=0.112 Sum_probs=47.6
Q ss_pred EEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccC-eeEEcCCCCCCCCCCC-HHHHHHHHHHcCCCEEEe
Q 009903 73 KILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD-ESVCIGEAPSSQSYLL-IPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 73 ~ILi~g-~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad-~~~~~~~~~~~~~~~~-~~~l~~~~~~~~id~Vi~ 149 (523)
+|||+| +|.+|..+++.+.+.|++|+++..+....... .. +.+.. +..+ .+.+.++++ ++|.|+-
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~-------D~~d~~~~~~~~~~--~~d~vi~ 69 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHF-------DVDWTPEEMAKQLH--GMDAIIN 69 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEEC-------CTTSCHHHHHTTTT--TCSEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEe-------cccCCHHHHHHHHc--CCCEEEE
Confidence 799999 48899999999999999999996543322111 11 22222 3566 777777665 5999987
Q ss_pred CCCc
Q 009903 150 GYGF 153 (523)
Q Consensus 150 ~~g~ 153 (523)
..+.
T Consensus 70 ~ag~ 73 (219)
T 3dqp_A 70 VSGS 73 (219)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 6543
No 129
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=93.25 E-value=0.35 Score=47.35 Aligned_cols=75 Identities=13% Similarity=-0.039 Sum_probs=50.2
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccC-eeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLAD-ESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad-~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
.|+|||+|+ |.+|..+++.+.+.|++|++++........ ...+.. ..+.. +..+.+.+.+++++.++|.|
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~-------Dl~d~~~~~~~~~~~~~D~v 92 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEG-------SVTDAGLLERAFDSFKPTHV 92 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEEC-------CTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEe-------eCCCHHHHHHHHhhcCCCEE
Confidence 468999997 889999999999999999998643221110 011111 12222 46677778777776689998
Q ss_pred EeCCC
Q 009903 148 HPGYG 152 (523)
Q Consensus 148 i~~~g 152 (523)
+-..+
T Consensus 93 ih~A~ 97 (330)
T 2pzm_A 93 VHSAA 97 (330)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 86543
No 130
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=93.09 E-value=0.26 Score=48.53 Aligned_cols=67 Identities=16% Similarity=0.064 Sum_probs=46.8
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
..|+|||+|+ |.+|..+++.|.+.|++|++++..... ..-+.+.. +..+.+.+.++++ ++|+|+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~-------Dl~d~~~~~~~~~--~~d~vi 82 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVG-------SLEDGQALSDAIM--GVSAVL 82 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEES-------CTTCHHHHHHHHT--TCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEec-------CcCCHHHHHHHHh--CCCEEE
Confidence 4678999997 889999999999999999999644332 01122332 3667778877775 699988
Q ss_pred eCC
Q 009903 149 PGY 151 (523)
Q Consensus 149 ~~~ 151 (523)
-..
T Consensus 83 h~A 85 (347)
T 4id9_A 83 HLG 85 (347)
T ss_dssp ECC
T ss_pred ECC
Confidence 543
No 131
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.02 E-value=0.21 Score=51.84 Aligned_cols=125 Identities=12% Similarity=0.092 Sum_probs=69.0
Q ss_pred CCCCCccCCCccEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCccccccC----eeEEcCCCCCCCCCCCHHHH
Q 009903 61 GGGALKVTCRQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLAD----ESVCIGEAPSSQSYLLIPNV 135 (523)
Q Consensus 61 ~~~~~~~~~~~k~ILi~g~g~~~~~vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad----~~~~~~~~~~~~~~~~~~~l 135 (523)
+.||.....++++|+|+|+|..|..+++++.+. |++|++++.+.+.. ..+++ ..+.+ +..+.+.+
T Consensus 13 ~~~~~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka---~~la~~~~~~~~~~-------D~~d~~~l 82 (467)
T 2axq_A 13 SSGHIEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANA---QALAKPSGSKAISL-------DVTDDSAL 82 (467)
T ss_dssp ----------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHH---HHHHGGGTCEEEEC-------CTTCHHHH
T ss_pred cCCccccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHH---HHHHHhcCCcEEEE-------ecCCHHHH
Confidence 345566666678999999999999999999998 78888775432211 11111 12222 24566666
Q ss_pred HHHHHHcCCCEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCC
Q 009903 136 LSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (523)
Q Consensus 136 ~~~~~~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~ 202 (523)
.++++ ++|+|+.+.+... ...+.+.+.+.|..++-.+...- +...+.+.++++|+.+...
T Consensus 83 ~~~l~--~~DvVIn~tp~~~-~~~v~~a~l~~g~~vvd~~~~~p----~~~~Ll~~Ak~aGv~~i~g 142 (467)
T 2axq_A 83 DKVLA--DNDVVISLIPYTF-HPNVVKSAIRTKTDVVTSSYISP----ALRELEPEIVKAGITVMNE 142 (467)
T ss_dssp HHHHH--TSSEEEECSCGGG-HHHHHHHHHHHTCEEEECSCCCH----HHHHHHHHHHHHTCEEECS
T ss_pred HHHHc--CCCEEEECCchhh-hHHHHHHHHhcCCEEEEeecCCH----HHHHHHHHHHHcCCEEEec
Confidence 66665 6999998765421 23445555566666553322000 1134445667778765544
No 132
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=92.99 E-value=0.37 Score=44.56 Aligned_cols=70 Identities=13% Similarity=-0.004 Sum_probs=47.0
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc----CC
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR----GC 144 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~----~i 144 (523)
|.|++||+|+ |.+|..+++.+.+.|++|++++.+.. . ..+ ..+.. |..+.+.+.+++++. ++
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~--~--~~~--~~~~~-------D~~~~~~~~~~~~~~~~~~~~ 67 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--G--EDL--IYVEG-------DVTREEDVRRAVARAQEEAPL 67 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--S--SSS--EEEEC-------CTTCHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc--c--cce--EEEeC-------CCCCHHHHHHHHHHHHhhCCc
Confidence 4578999996 67899999999999999999864433 1 111 23333 355666666655532 78
Q ss_pred CEEEeCCC
Q 009903 145 TMLHPGYG 152 (523)
Q Consensus 145 d~Vi~~~g 152 (523)
|.++-..+
T Consensus 68 d~li~~ag 75 (242)
T 1uay_A 68 FAVVSAAG 75 (242)
T ss_dssp EEEEECCC
T ss_pred eEEEEccc
Confidence 88886543
No 133
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=92.95 E-value=0.32 Score=47.66 Aligned_cols=70 Identities=16% Similarity=0.022 Sum_probs=46.5
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
|+|||+|+ |.+|..+++.+.+.|++|++++.+...........-+.+.. +..+.+.+.++.+ ++|.|+-.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~-------Dl~d~~~~~~~~~--~~d~vih~ 84 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVA-------EMLDHAGLERALR--GLDGVIFS 84 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEEC-------CTTCHHHHHHHTT--TCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEe-------cCCCHHHHHHHHc--CCCEEEEC
Confidence 48999996 88999999999999999999864433211100001122322 3667777777664 59988854
No 134
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=92.52 E-value=0.13 Score=47.33 Aligned_cols=90 Identities=11% Similarity=0.104 Sum_probs=58.5
Q ss_pred CccEEEEEcCcHHHHHHHHH--HHHcCCcEEEEecCCCCC-Cccc-cccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009903 70 RQEKILVANRGEIAVRVIRT--AHEMGIPCVAVYSTIDKD-ALHV-KLADESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~a--a~~~G~~vi~v~~~~~~~-~~~~-~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id 145 (523)
..++++|+|+|..|..++++ ..+.|++++.+. |.++. .... .+..-.+. ..+++.+++++.++|
T Consensus 83 ~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~-D~dp~~kiG~~~i~GvpV~-----------~~~dL~~~v~~~~Id 150 (212)
T 3keo_A 83 STTNVMLVGCGNIGRALLHYRFHDRNKMQISMAF-DLDSNDLVGKTTEDGIPVY-----------GISTINDHLIDSDIE 150 (212)
T ss_dssp SCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEE-ECTTSTTTTCBCTTCCBEE-----------EGGGHHHHC-CCSCC
T ss_pred CCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEE-eCCchhccCceeECCeEEe-----------CHHHHHHHHHHcCCC
Confidence 35789999999999999988 456789988775 33433 3333 33222221 245678888888999
Q ss_pred EEEeCCCcccccHHHHHHHHHcCCcee
Q 009903 146 MLHPGYGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 146 ~Vi~~~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
.++.+.... ....+++.+.+.|++-+
T Consensus 151 ~vIIAvPs~-~aq~v~d~lv~~GIk~I 176 (212)
T 3keo_A 151 TAILTVPST-EAQEVADILVKAGIKGI 176 (212)
T ss_dssp EEEECSCGG-GHHHHHHHHHHHTCCEE
T ss_pred EEEEecCch-hHHHHHHHHHHcCCCEE
Confidence 888764321 22467777788887544
No 135
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=92.52 E-value=0.19 Score=47.24 Aligned_cols=76 Identities=8% Similarity=-0.108 Sum_probs=47.0
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccC-eeEEcCCCCCCCCCCCHHHHHHHHHH-----
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLAD-ESVCIGEAPSSQSYLLIPNVLSAAIS----- 141 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad-~~~~~~~~~~~~~~~~~~~l~~~~~~----- 141 (523)
|.|++||+|+ +.+|..+++.+.+.|++|++++.+.+.... ...+.. ..+.. |..+.+.+.+++++
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~~ 73 (247)
T 3dii_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHG-------DVADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEEC-------CTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeEEe-------eCCCHHHHHHHHHHHHHHc
Confidence 5688999996 678999999999999999998543221110 011111 12332 35566665555543
Q ss_pred cCCCEEEeCCC
Q 009903 142 RGCTMLHPGYG 152 (523)
Q Consensus 142 ~~id~Vi~~~g 152 (523)
.++|.++-.-+
T Consensus 74 g~id~lv~nAg 84 (247)
T 3dii_A 74 QRIDVLVNNAC 84 (247)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 27999886543
No 136
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.40 E-value=0.13 Score=49.25 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=30.3
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~ 104 (523)
+|+|||+|+|.+|..+++.+.+.|++|+++....
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4689999999999999999999999999996543
No 137
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.37 E-value=0.07 Score=55.42 Aligned_cols=76 Identities=16% Similarity=-0.000 Sum_probs=50.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
.|+|+|+|+|..|..+++.|.+.|++|++++.+++.......-.|-....+ +..+.+. ++-+.-...|+++..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~G------d~~~~~~-L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNG------HASHPDV-LHEAGAQDADMLVAV 75 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEES------CTTCHHH-HHHHTTTTCSEEEEC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEE------cCCCHHH-HHhcCCCcCCEEEEE
Confidence 368999999999999999999999999999655443222122224334343 3444444 444444678999877
Q ss_pred CCc
Q 009903 151 YGF 153 (523)
Q Consensus 151 ~g~ 153 (523)
++.
T Consensus 76 t~~ 78 (461)
T 4g65_A 76 TNT 78 (461)
T ss_dssp CSC
T ss_pred cCC
Confidence 653
No 138
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=92.34 E-value=0.27 Score=48.43 Aligned_cols=74 Identities=5% Similarity=0.011 Sum_probs=49.4
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcccc-c---------cC-eeEEcCCCCCCCCCCCHHHHHH
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-L---------AD-ESVCIGEAPSSQSYLLIPNVLS 137 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~-~---------ad-~~~~~~~~~~~~~~~~~~~l~~ 137 (523)
++|+|||+|+ |.+|..+++.|.+.|++|++++........... + .. +.+.. +..+.+.+.+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEG-------DIRDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEEC-------CTTCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEc-------cCCCHHHHHH
Confidence 3579999996 889999999999999999999643322111100 0 11 22322 4667777777
Q ss_pred HHHHcCCCEEEeCCC
Q 009903 138 AAISRGCTMLHPGYG 152 (523)
Q Consensus 138 ~~~~~~id~Vi~~~g 152 (523)
+++ ++|.|+-..+
T Consensus 97 ~~~--~~d~Vih~A~ 109 (351)
T 3ruf_A 97 VMK--GVDHVLHQAA 109 (351)
T ss_dssp HTT--TCSEEEECCC
T ss_pred Hhc--CCCEEEECCc
Confidence 775 6999886543
No 139
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=92.34 E-value=0.21 Score=47.74 Aligned_cols=89 Identities=19% Similarity=0.139 Sum_probs=54.5
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHc--CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 72 EKILVANR-GEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~--G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
|+|||+|+ |.+|..+++.+.+. |++|++++.+...........-+.+.. +..+.+.+.++.+ ++|.|+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~-------D~~d~~~l~~~~~--~~d~vi 71 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHG-------DYNQPESLQKAFA--GVSKLL 71 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEEC-------CTTCHHHHHHHTT--TCSEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEe-------ccCCHHHHHHHHh--cCCEEE
Confidence 46999996 88999999999999 999999865432211000001122332 4667777777765 589888
Q ss_pred eCCCcccc---c----HHHHHHHHHcCC
Q 009903 149 PGYGFLAE---N----AVFVEMCREHGI 169 (523)
Q Consensus 149 ~~~g~~~e---~----~~~a~~~~~~gl 169 (523)
-..+.... + ..+.+.+.+.|+
T Consensus 72 ~~a~~~~~~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 72 FISGPHYDNTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp ECCCCCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred EcCCCCcCchHHHHHHHHHHHHHHHcCC
Confidence 55432111 1 234455666665
No 140
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=92.30 E-value=0.24 Score=47.17 Aligned_cols=77 Identities=9% Similarity=0.035 Sum_probs=47.0
Q ss_pred CCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-----
Q 009903 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR----- 142 (523)
Q Consensus 69 ~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~----- 142 (523)
.|.|++||.|+ +.+|..+++.+.+.|++|++++.+.+.........-..+.+ |..+.+.+.+++++.
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~~~~~g 86 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQV-------DVTDKYTFDTAITRAEKIYG 86 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEEC-------CTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEe-------cCCCHHHHHHHHHHHHHHCC
Confidence 45688999986 67899999999999999999864322110000001122222 355665555554432
Q ss_pred CCCEEEeCCC
Q 009903 143 GCTMLHPGYG 152 (523)
Q Consensus 143 ~id~Vi~~~g 152 (523)
++|.++-.-|
T Consensus 87 ~iD~lvnnAg 96 (266)
T 3p19_A 87 PADAIVNNAG 96 (266)
T ss_dssp SEEEEEECCC
T ss_pred CCCEEEECCC
Confidence 6898886544
No 141
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=92.20 E-value=0.15 Score=48.28 Aligned_cols=34 Identities=12% Similarity=0.067 Sum_probs=29.1
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
|.|+|||.|+ +.+|..+++.+.+.|++|++++.+
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6689999986 568999999999999999998643
No 142
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=92.17 E-value=0.53 Score=46.50 Aligned_cols=75 Identities=12% Similarity=-0.035 Sum_probs=50.9
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccc---cC--eeEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL---AD--ESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~---ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 144 (523)
.|+|||+|+ |.+|..+++.+.+.|++|++++............ .. ..+.. +..+.+.+.++++..++
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~ 81 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIG-------DIRDQNKLLESIREFQP 81 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEEC-------CTTCHHHHHHHHHHHCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEc-------cccCHHHHHHHHHhcCC
Confidence 468999995 8899999999999999999986543322111100 11 22322 36677888888777789
Q ss_pred CEEEeCCC
Q 009903 145 TMLHPGYG 152 (523)
Q Consensus 145 d~Vi~~~g 152 (523)
|.|+-..+
T Consensus 82 d~vih~A~ 89 (357)
T 1rkx_A 82 EIVFHMAA 89 (357)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 99886543
No 143
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=92.15 E-value=0.91 Score=42.67 Aligned_cols=29 Identities=14% Similarity=0.280 Sum_probs=25.4
Q ss_pred EEEEEcC-cHHHHHHHHHHHHc-CCcEEEEe
Q 009903 73 KILVANR-GEIAVRVIRTAHEM-GIPCVAVY 101 (523)
Q Consensus 73 ~ILi~g~-g~~~~~vi~aa~~~-G~~vi~v~ 101 (523)
||+|+|+ |.+|..+++.+.+. |++++.+.
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~ 32 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAEL 32 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 7999996 99999999999876 99988764
No 144
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=92.03 E-value=0.27 Score=46.70 Aligned_cols=70 Identities=16% Similarity=0.067 Sum_probs=48.9
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
+|+|||+|+ |.+|..+++.+.+.|++|++++.+..... ...-+.+.. +..+.+.+.++++ ++|.|+-
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~-------Dl~d~~~~~~~~~--~~D~vi~ 70 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQC-------DLADANAVNAMVA--GCDGIVH 70 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEEC-------CTTCHHHHHHHHT--TCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEc-------CCCCHHHHHHHHc--CCCEEEE
Confidence 578999995 78999999999999999998864433222 111122333 3667788888776 6999886
Q ss_pred CCC
Q 009903 150 GYG 152 (523)
Q Consensus 150 ~~g 152 (523)
.-+
T Consensus 71 ~Ag 73 (267)
T 3rft_A 71 LGG 73 (267)
T ss_dssp CCS
T ss_pred CCC
Confidence 543
No 145
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.90 E-value=0.33 Score=45.86 Aligned_cols=32 Identities=9% Similarity=0.195 Sum_probs=28.0
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCC-cEEEEec
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGI-PCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~-~vi~v~~ 102 (523)
.++|+|+|.|..|..+++.+.+.|+ ++++++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~ 63 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF 63 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 5789999999999999999999998 5666743
No 146
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=91.80 E-value=0.68 Score=45.87 Aligned_cols=75 Identities=11% Similarity=0.014 Sum_probs=48.3
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHH--cCCcEEEEecCCCCC----------Ccccccc---CeeEEcCCCCCCCCCCCHH
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHE--MGIPCVAVYSTIDKD----------ALHVKLA---DESVCIGEAPSSQSYLLIP 133 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~--~G~~vi~v~~~~~~~----------~~~~~~a---d~~~~~~~~~~~~~~~~~~ 133 (523)
++|+|||+|+ |.+|..+++.+.+ .|++|++++...... ....... -..+.. +..+.+
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~ 81 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA-------DINNPL 81 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC-------CTTCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEEC-------CCCCHH
Confidence 3579999986 8899999999999 999999996433200 0001111 123332 366677
Q ss_pred HHHHHHHHcCCCEEEeCCC
Q 009903 134 NVLSAAISRGCTMLHPGYG 152 (523)
Q Consensus 134 ~l~~~~~~~~id~Vi~~~g 152 (523)
.+.++ ...++|.|+-.-+
T Consensus 82 ~~~~~-~~~~~D~vih~A~ 99 (362)
T 3sxp_A 82 DLRRL-EKLHFDYLFHQAA 99 (362)
T ss_dssp HHHHH-TTSCCSEEEECCC
T ss_pred HHHHh-hccCCCEEEECCc
Confidence 76665 3467999885543
No 147
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=91.77 E-value=0.65 Score=42.70 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=29.6
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
..+|+++|+|+|..|..+++.+++.|++++.+.+
T Consensus 10 ~~~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfiD 43 (220)
T 4ea9_A 10 LAIGGVVIIGGGGHAKVVIESLRACGETVAAIVD 43 (220)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cCCCCEEEEcCCHHHHHHHHHHHhCCCEEEEEEe
Confidence 3467899999999999999999999999887753
No 148
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.72 E-value=0.1 Score=48.64 Aligned_cols=90 Identities=10% Similarity=0.109 Sum_probs=52.2
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
...++|+|+|.|..|..+++.+.+.|+ |++++.+++..... . ....+..+ +..+.+.+.+. .-.+.|.|+
T Consensus 7 ~~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~-~-~~~~~i~g------d~~~~~~l~~a-~i~~ad~vi 76 (234)
T 2aef_A 7 AKSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVL-R-SGANFVHG------DPTRVSDLEKA-NVRGARAVI 76 (234)
T ss_dssp ---CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHH-H-TTCEEEES------CTTCHHHHHHT-TCTTCSEEE
T ss_pred CCCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHH-h-cCCeEEEc------CCCCHHHHHhc-CcchhcEEE
Confidence 346789999999999999999999999 88885443321111 1 12222222 34455544433 224688888
Q ss_pred eCCCcccccHHHHHHHHHcC
Q 009903 149 PGYGFLAENAVFVEMCREHG 168 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~g 168 (523)
...+....+......+++++
T Consensus 77 ~~~~~d~~n~~~~~~a~~~~ 96 (234)
T 2aef_A 77 VDLESDSETIHCILGIRKID 96 (234)
T ss_dssp ECCSCHHHHHHHHHHHHHHC
T ss_pred EcCCCcHHHHHHHHHHHHHC
Confidence 77643222334445556554
No 149
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=91.72 E-value=0.53 Score=45.44 Aligned_cols=73 Identities=11% Similarity=0.024 Sum_probs=47.4
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
|+|||+|+ |.+|..+++.+.+.|++|++++...... ...+......+ ..+..+.+.+.++.++.++|.|+-.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~~~~d~vi~~ 73 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGK--RENVPKGVPFF-----RVDLRDKEGVERAFREFRPTHVSHQ 73 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCC--GGGSCTTCCEE-----CCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCc--hhhcccCeEEE-----ECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 37999996 8899999999999999999885321111 11111111111 1245677777777776689988854
Q ss_pred C
Q 009903 151 Y 151 (523)
Q Consensus 151 ~ 151 (523)
.
T Consensus 74 a 74 (311)
T 2p5y_A 74 A 74 (311)
T ss_dssp C
T ss_pred c
Confidence 3
No 150
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=91.52 E-value=0.88 Score=43.20 Aligned_cols=73 Identities=16% Similarity=0.145 Sum_probs=48.5
Q ss_pred CCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-----
Q 009903 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR----- 142 (523)
Q Consensus 69 ~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~----- 142 (523)
...|+|||+|+ +.+|..+++.+.+.|++|++++.+..... . .-..+.+ |..+.+.+.+++++.
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---~-~~~~~~~-------Dv~~~~~v~~~~~~~~~~~g 80 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV---N-VSDHFKI-------DVTNEEEVKEAVEKTTKKYG 80 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT---T-SSEEEEC-------CTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc---C-ceeEEEe-------cCCCHHHHHHHHHHHHHHcC
Confidence 34689999996 67899999999999999999864433221 1 1223333 355666666555432
Q ss_pred CCCEEEeCCC
Q 009903 143 GCTMLHPGYG 152 (523)
Q Consensus 143 ~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 81 ~iD~lv~nAg 90 (269)
T 3vtz_A 81 RIDILVNNAG 90 (269)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999986544
No 151
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=91.49 E-value=0.19 Score=46.42 Aligned_cols=33 Identities=9% Similarity=0.042 Sum_probs=29.4
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
|.-.|+|||+|+.|..++..|.+.|++|.+++.
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 455699999999999999999999999999954
No 152
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=91.47 E-value=0.51 Score=44.38 Aligned_cols=75 Identities=7% Similarity=-0.035 Sum_probs=47.3
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHH-----cCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RGC 144 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~i 144 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.+.......+....+.+ |..+.+.+.+++++ .++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~~g~i 78 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQV-------DLEDERERVRFVEEAAYALGRV 78 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEEC-------CTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhCCEEEe-------eCCCHHHHHHHHHHHHHHcCCC
Confidence 478999986 67899999999999999999864433210001111133333 35566665555443 279
Q ss_pred CEEEeCCC
Q 009903 145 TMLHPGYG 152 (523)
Q Consensus 145 d~Vi~~~g 152 (523)
|.++-.-+
T Consensus 79 D~lv~~Ag 86 (256)
T 2d1y_A 79 DVLVNNAA 86 (256)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886544
No 153
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=91.45 E-value=0.49 Score=46.37 Aligned_cols=75 Identities=17% Similarity=-0.003 Sum_probs=49.1
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc--ccccc----CeeEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL--HVKLA----DESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~--~~~~a----d~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 143 (523)
||+|||+|+ |.+|..+++.+.+.|++|++++........ ...+. -+.+.. +..+.+.+.++++..+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~ 73 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHG-------DIRNKNDVTRLITKYM 73 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEEC-------CTTCHHHHHHHHHHHC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEc-------CCCCHHHHHHHHhccC
Confidence 468999995 889999999999999999998532111100 00110 122322 3667778888877677
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.|+-..+
T Consensus 74 ~d~vih~A~ 82 (347)
T 1orr_A 74 PDSCFHLAG 82 (347)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCc
Confidence 999886543
No 154
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=91.44 E-value=0.94 Score=42.57 Aligned_cols=71 Identities=15% Similarity=0.074 Sum_probs=46.5
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHH-----cC
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RG 143 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~ 143 (523)
+.|++||+|+ |.+|..+++.+.+.|++|+++..+.+.... -..+.+ |..+.+.+.+++++ .+
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~-------Dl~d~~~v~~~~~~~~~~~g~ 87 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG-----FLAVKC-------DITDTEQVEQAYKEIEETHGP 87 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----SEEEEC-------CTTSHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc-----ceEEEe-------cCCCHHHHHHHHHHHHHHcCC
Confidence 3578999996 678999999999999999988644332111 122333 35566665555443 25
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.++-.-+
T Consensus 88 iD~lv~nAg 96 (253)
T 2nm0_A 88 VEVLIANAG 96 (253)
T ss_dssp CSEEEEECS
T ss_pred CCEEEECCC
Confidence 898886543
No 155
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=91.27 E-value=0.64 Score=46.81 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=32.0
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID 105 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~ 105 (523)
+..+++|+|+|..+..+++-++.+||+|+++++.++
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 356899999999999999999999999999976544
No 156
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=91.26 E-value=0.21 Score=47.33 Aligned_cols=71 Identities=10% Similarity=-0.006 Sum_probs=48.2
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
|+|+|||+|+ |.+|..+++.+.+.|++|++++.+..... ......+ ..+..+.+.+.++++ ++|.|+
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~-----~~Dl~d~~~~~~~~~--~~d~vi 68 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----EAHEEIV-----ACDLADAQAVHDLVK--DCDGII 68 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----CTTEEEC-----CCCTTCHHHHHHHHT--TCSEEE
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----CCCccEE-----EccCCCHHHHHHHHc--CCCEEE
Confidence 5789999997 88999999999999999998854332111 1111111 124567777777765 599988
Q ss_pred eCCC
Q 009903 149 PGYG 152 (523)
Q Consensus 149 ~~~g 152 (523)
-..+
T Consensus 69 ~~a~ 72 (267)
T 3ay3_A 69 HLGG 72 (267)
T ss_dssp ECCS
T ss_pred ECCc
Confidence 6543
No 157
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=91.26 E-value=0.32 Score=45.35 Aligned_cols=68 Identities=10% Similarity=-0.064 Sum_probs=45.9
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc--CCCEE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR--GCTML 147 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~--~id~V 147 (523)
||+|||+|+ |.+|..+++.+.+.|++|++++.+.+... . .+ ..+..+.+.+.+++++. ++|.|
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~-----~~-------~~D~~~~~~~~~~~~~~~~~~d~v 66 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE--A-----DL-------STPGGRETAVAAVLDRCGGVLDGL 66 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE--C-----CT-------TSHHHHHHHHHHHHHHHTTCCSEE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc--c-----cc-------cCCcccHHHHHHHHHHcCCCccEE
Confidence 468999996 78999999999999999999864332111 0 01 11234455666666654 79999
Q ss_pred EeCCC
Q 009903 148 HPGYG 152 (523)
Q Consensus 148 i~~~g 152 (523)
+-..+
T Consensus 67 i~~Ag 71 (255)
T 2dkn_A 67 VCCAG 71 (255)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 86544
No 158
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=91.18 E-value=0.37 Score=45.63 Aligned_cols=75 Identities=8% Similarity=0.072 Sum_probs=47.2
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccc-cccCeeEEcCCCCCCCCCCCHHHHHHHHHH-----cC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RG 143 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~ 143 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+...... ...-..+.+ |..+.+.+.+++++ .+
T Consensus 27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~~g~ 99 (260)
T 3gem_A 27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYG-------DFSCETGIMAFIDLLKTQTSS 99 (260)
T ss_dssp CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEEC-------CTTSHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEEC-------CCCCHHHHHHHHHHHHHhcCC
Confidence 578999986 67899999999999999999865433211000 011123333 35566665555443 26
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.++-.-+
T Consensus 100 iD~lv~nAg 108 (260)
T 3gem_A 100 LRAVVHNAS 108 (260)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999886544
No 159
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=91.18 E-value=0.64 Score=43.67 Aligned_cols=75 Identities=9% Similarity=-0.023 Sum_probs=47.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-ccccC--eeEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~~ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~---- 142 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+....... ..+.. ..+.+ |..+.+.+.+++++.
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~v~~~~~~~~~~~ 84 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPA-------DVTSEKDVQTALALAKGKF 84 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEc-------CCCCHHHHHHHHHHHHHHC
Confidence 478999986 6789999999999999999986443221100 01111 12222 355666665555432
Q ss_pred -CCCEEEeCCC
Q 009903 143 -GCTMLHPGYG 152 (523)
Q Consensus 143 -~id~Vi~~~g 152 (523)
++|.|+-..+
T Consensus 85 g~id~li~~Ag 95 (265)
T 2o23_A 85 GRVDVAVNCAG 95 (265)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 7999886544
No 160
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=91.17 E-value=0.37 Score=46.52 Aligned_cols=35 Identities=9% Similarity=0.069 Sum_probs=31.3
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|+++|+|+|+|..|...+..|.+.|++|++++..
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCccCEEEECccHHHHHHHHHHHHCCCcEEEEecc
Confidence 35679999999999999999999999999999643
No 161
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=91.09 E-value=0.28 Score=45.34 Aligned_cols=76 Identities=12% Similarity=0.003 Sum_probs=46.8
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-ccccC-eeEEcCCCCCCCCCCCHHHHHHHHHH-----
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLAD-ESVCIGEAPSSQSYLLIPNVLSAAIS----- 141 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~~ad-~~~~~~~~~~~~~~~~~~~l~~~~~~----- 141 (523)
|.|+|||+|+ |.+|..+++.+.+.|++|++++.+.+..... ..+.. ..+.. |..+.+.+.++++.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~~ 76 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPG-------DVREEGDWARAVAAMEEAF 76 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEe-------cCCCHHHHHHHHHHHHHHc
Confidence 5678999986 6789999999999999999885432211000 01101 22222 35566665555443
Q ss_pred cCCCEEEeCCC
Q 009903 142 RGCTMLHPGYG 152 (523)
Q Consensus 142 ~~id~Vi~~~g 152 (523)
.++|.|+-..+
T Consensus 77 ~~id~li~~Ag 87 (234)
T 2ehd_A 77 GELSALVNNAG 87 (234)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 27899886544
No 162
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=90.98 E-value=1.2 Score=41.77 Aligned_cols=75 Identities=13% Similarity=0.022 Sum_probs=49.9
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-CCCEEE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-~id~Vi 148 (523)
.|++||.|+ +.+|..+++.+.+.|.+|++++.+.+.........-..+.+ |..+.+.+.++.++. ++|.++
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~g~iDiLV 83 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREEL-------DITDSQRLQRLFEALPRLDVLV 83 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEEC-------CTTCHHHHHHHHHHCSCCSEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEe-------cCCCHHHHHHHHHhcCCCCEEE
Confidence 589999996 56899999999999999999975544322111111112222 356677777777665 488888
Q ss_pred eCCC
Q 009903 149 PGYG 152 (523)
Q Consensus 149 ~~~g 152 (523)
-.-|
T Consensus 84 NNAG 87 (242)
T 4b79_A 84 NNAG 87 (242)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 6543
No 163
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=90.90 E-value=1.5 Score=40.94 Aligned_cols=71 Identities=10% Similarity=0.035 Sum_probs=47.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-----CC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----GC 144 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~i 144 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.+... ..-..+.+ |..+.+.+.+++++. ++
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~-------D~~d~~~~~~~~~~~~~~~g~i 75 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ----YPFATEVM-------DVADAAQVAQVCQRLLAETERL 75 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSC----CSSEEEEC-------CTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhc----CCceEEEc-------CCCCHHHHHHHHHHHHHHcCCC
Confidence 478999986 67899999999999999999865433211 11122333 355666666655432 79
Q ss_pred CEEEeCCC
Q 009903 145 TMLHPGYG 152 (523)
Q Consensus 145 d~Vi~~~g 152 (523)
|.++-.-+
T Consensus 76 d~lv~~Ag 83 (250)
T 2fwm_X 76 DALVNAAG 83 (250)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886544
No 164
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=90.82 E-value=0.66 Score=41.59 Aligned_cols=62 Identities=13% Similarity=0.095 Sum_probs=44.9
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-CCCEEEe
Q 009903 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTMLHP 149 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-~id~Vi~ 149 (523)
|+|||+|+ |.+|..+++.+. .|++|++++.+.. .+.. +..+.+.+.++.++. ++|.|+-
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~-------D~~~~~~~~~~~~~~~~~d~vi~ 64 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTV-------DITNIDSIKKMYEQVGKVDAIVS 64 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEEC-------CTTCHHHHHHHHHHHCCEEEEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceee-------ecCCHHHHHHHHHHhCCCCEEEE
Confidence 36999986 678999999999 9999999854322 2333 356777777776654 6898886
Q ss_pred CCC
Q 009903 150 GYG 152 (523)
Q Consensus 150 ~~g 152 (523)
..+
T Consensus 65 ~ag 67 (202)
T 3d7l_A 65 ATG 67 (202)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 165
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=90.79 E-value=1.1 Score=42.39 Aligned_cols=72 Identities=14% Similarity=0.054 Sum_probs=47.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-----CC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----GC 144 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~i 144 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+...... ..-..+.. |..+.+.+.+++++. ++
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~-------Dv~d~~~v~~~~~~~~~~~g~i 97 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD---PDIHTVAG-------DISKPETADRIVREGIERFGRI 97 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS---TTEEEEES-------CTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---CceEEEEc-------cCCCHHHHHHHHHHHHHHCCCC
Confidence 478999986 678999999999999999998654332211 11122322 355666666555432 79
Q ss_pred CEEEeCCC
Q 009903 145 TMLHPGYG 152 (523)
Q Consensus 145 d~Vi~~~g 152 (523)
|.++-.-+
T Consensus 98 D~lv~nAg 105 (260)
T 3un1_A 98 DSLVNNAG 105 (260)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99986544
No 166
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=90.74 E-value=1.4 Score=41.26 Aligned_cols=77 Identities=10% Similarity=0.006 Sum_probs=45.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-ccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-----C
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----G 143 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~ 143 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+....... ..+......+. .|..+.+.+.+++++. +
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dv~~~~~v~~~~~~~~~~~g~ 81 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRN-----ADVTNEADATAALAFAKQEFGH 81 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEE-----CCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEE-----ccCCCHHHHHHHHHHHHHHcCC
Confidence 478999996 6789999999999999999986544322111 11111111111 1355555555554432 7
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.++-.-+
T Consensus 82 id~lv~nAg 90 (257)
T 3tpc_A 82 VHGLVNCAG 90 (257)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999886644
No 167
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=90.66 E-value=0.41 Score=44.62 Aligned_cols=33 Identities=9% Similarity=-0.009 Sum_probs=28.7
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
|.|++||+|+ |.+|..+++.+.+.|++|++++.
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r 34 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDL 34 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 4578999986 67899999999999999998854
No 168
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=90.59 E-value=1.5 Score=43.98 Aligned_cols=77 Identities=17% Similarity=0.151 Sum_probs=51.4
Q ss_pred ccEEEEE--cCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccc-cCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 71 QEKILVA--NRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 71 ~k~ILi~--g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
..+|||+ |+|..|..+++.|+.+|.+|++++.+.+......++ +|..+... +....+.+.++....++|.|
T Consensus 171 g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~------~~~~~~~v~~~t~~~g~d~v 244 (379)
T 3iup_A 171 GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAA------SPTFMQDLTEALVSTGATIA 244 (379)
T ss_dssp TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETT------STTHHHHHHHHHHHHCCCEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCC------ChHHHHHHHHHhcCCCceEE
Confidence 4679999 678999999999999999999886443322222222 44444321 12234567777777789999
Q ss_pred EeCCCc
Q 009903 148 HPGYGF 153 (523)
Q Consensus 148 i~~~g~ 153 (523)
+-+.+.
T Consensus 245 ~d~~g~ 250 (379)
T 3iup_A 245 FDATGG 250 (379)
T ss_dssp EESCEE
T ss_pred EECCCc
Confidence 976653
No 169
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=90.58 E-value=0.62 Score=45.89 Aligned_cols=73 Identities=10% Similarity=0.068 Sum_probs=47.7
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-ccc---------cC-eeEEcCCCCCCCCCCCHHHHHHH
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKL---------AD-ESVCIGEAPSSQSYLLIPNVLSA 138 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~~---------ad-~~~~~~~~~~~~~~~~~~~l~~~ 138 (523)
+|+|||+|+ |.+|..+++.+.+.|++|++++......... ..+ .. ..+.. +..+.+.+.++
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~ 99 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG-------DIRNLDDCNNA 99 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEEC-------CTTSHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEEC-------CCCCHHHHHHH
Confidence 578999997 8899999999999999999986432211000 000 11 12222 35667777777
Q ss_pred HHHcCCCEEEeCCC
Q 009903 139 AISRGCTMLHPGYG 152 (523)
Q Consensus 139 ~~~~~id~Vi~~~g 152 (523)
++ ++|.|+-..+
T Consensus 100 ~~--~~d~vih~A~ 111 (352)
T 1sb8_A 100 CA--GVDYVLHQAA 111 (352)
T ss_dssp HT--TCSEEEECCS
T ss_pred hc--CCCEEEECCc
Confidence 65 6999886543
No 170
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=90.33 E-value=0.48 Score=45.25 Aligned_cols=62 Identities=8% Similarity=0.060 Sum_probs=46.4
Q ss_pred CCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 69 ~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
...++|||+|+ |.+|..+++.+.+.|++|++++.. ..+..+.+.+.++++..++|.|
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~Dl~d~~~~~~~~~~~~~d~v 67 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------DLDITNVLAVNKFFNEKKPNVV 67 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------cCCCCCHHHHHHHHHhcCCCEE
Confidence 34678999986 889999999999999999988422 0135567777777776689999
Q ss_pred EeCCC
Q 009903 148 HPGYG 152 (523)
Q Consensus 148 i~~~g 152 (523)
+-..+
T Consensus 68 ih~A~ 72 (292)
T 1vl0_A 68 INCAA 72 (292)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 86543
No 171
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=90.28 E-value=1.8 Score=44.32 Aligned_cols=113 Identities=15% Similarity=0.177 Sum_probs=66.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCcccccc-CeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLA-DESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~a-d~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
.|+|+|+|.|..|...++.|+++|++|++.+....... ...+. ...+..+ ..+.+.+ . ++|.|+.
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~-~~~l~~G~~~~~g-------~~~~~~~----~--~~d~vV~ 70 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG-LDKLPEAVERHTG-------SLNDEWL----M--AADLIVA 70 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT-GGGSCTTSCEEES-------SCCHHHH----H--TCSEEEE
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch-hHHhhCCCEEEEC-------CCcHHHh----c--cCCEEEe
Confidence 46899999999999999999999999999875433221 11121 2222222 2222222 2 5899888
Q ss_pred CCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCC-----------HH----HHHHHHHHCCCCC
Q 009903 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGD-----------KS----TARETMKNAGVPT 199 (523)
Q Consensus 150 ~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~d-----------K~----~~r~~l~~~Gip~ 199 (523)
..+....++ ....+.+.|+++++ ..+......+ |. ....+|++.|..+
T Consensus 71 s~gi~~~~p-~~~~a~~~~~~v~~-~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~g~~~ 133 (439)
T 2x5o_A 71 SPGIALAHP-SLSAAADAGIEIVG-DIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNV 133 (439)
T ss_dssp CTTSCTTCH-HHHHHHHTTCEEEC-HHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHTTCCE
T ss_pred CCCCCCCCH-HHHHHHHCCCcEEE-HHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCCCE
Confidence 766433333 33445567888874 3444433222 43 4455567777653
No 172
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=90.22 E-value=0.62 Score=44.97 Aligned_cols=75 Identities=11% Similarity=-0.025 Sum_probs=47.3
Q ss_pred ccEEEEEcCc---HHHHHHHHHHHHcCCcEEEEecCCCCCCcccccc-----CeeEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009903 71 QEKILVANRG---EIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLA-----DESVCIGEAPSSQSYLLIPNVLSAAISR 142 (523)
Q Consensus 71 ~k~ILi~g~g---~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~a-----d~~~~~~~~~~~~~~~~~~~l~~~~~~~ 142 (523)
.|++||+|++ .+|..+++.+.+.|++|++++.+.........+. ...+.+ |..+.+.+.+++++.
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~ 102 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPC-------DVSDAESVDNMFKVL 102 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEEC-------CTTCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEc-------CCCCHHHHHHHHHHH
Confidence 5789999975 7899999999999999998864422111111110 123333 355666665555442
Q ss_pred -----CCCEEEeCCC
Q 009903 143 -----GCTMLHPGYG 152 (523)
Q Consensus 143 -----~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 103 ~~~~g~iD~lVnnAG 117 (296)
T 3k31_A 103 AEEWGSLDFVVHAVA 117 (296)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 7999886554
No 173
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=90.18 E-value=1.1 Score=43.69 Aligned_cols=77 Identities=12% Similarity=0.056 Sum_probs=50.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-c-cccc--CeeEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-H-VKLA--DESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~-~~~a--d~~~~~~~~~~~~~~~~~~~l~~~~~~~~id 145 (523)
.|+|||+|+ |.+|..+++.+.+.|++|++++.+...... . ..+. .....+ ..+..+.+.+.++++..++|
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~~~~~~~~d 77 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKII-----HMDLLEFSNIIRTIEKVQPD 77 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEEC-----CCCTTCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEE-----ECCCCCHHHHHHHHHhcCCC
Confidence 368999997 889999999999999999998543322110 0 0010 111111 12466778888887776899
Q ss_pred EEEeCCC
Q 009903 146 MLHPGYG 152 (523)
Q Consensus 146 ~Vi~~~g 152 (523)
.|+-..+
T Consensus 78 ~vih~A~ 84 (345)
T 2z1m_A 78 EVYNLAA 84 (345)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9886543
No 174
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.16 E-value=0.5 Score=48.87 Aligned_cols=87 Identities=14% Similarity=0.063 Sum_probs=53.3
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccC--eeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
.++|||+|+|..|.+.++.+.+.|.+|++++++..+ ....+++ ....+. ..+ ..+.+ .++|.|+
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~--~~~~l~~~~~i~~~~-----~~~-~~~~l------~~~~lVi 77 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIP--QFTVWANEGMLTLVE-----GPF-DETLL------DSCWLAI 77 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCH--HHHHHHTTTSCEEEE-----SSC-CGGGG------TTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCH--HHHHHHhcCCEEEEE-----CCC-Ccccc------CCccEEE
Confidence 478999999999999999999999999999653221 1122211 111111 011 11111 2578888
Q ss_pred eCCCcccccHHHHHHHHHcCCce
Q 009903 149 PGYGFLAENAVFVEMCREHGINF 171 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~ 171 (523)
...+-...+..+.+.+++.|+++
T Consensus 78 ~at~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 78 AATDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp ECCSCHHHHHHHHHHHHHTTCEE
T ss_pred EcCCCHHHHHHHHHHHHHcCCEE
Confidence 77653222456667777788765
No 175
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=90.16 E-value=0.91 Score=46.89 Aligned_cols=85 Identities=13% Similarity=0.072 Sum_probs=58.7
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
.||+.|.|.+.....+++.+.++|.+++.+..............++.+ ..|...+.+++++.++|.++.+
T Consensus 313 Gkrv~i~~~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~~~~v~----------~~D~~~le~~i~~~~pDllig~ 382 (458)
T 3pdi_B 313 SARTAIAADPDLLLGFDALLRSMGAHTVAAVVPARAAALVDSPLPSVR----------VGDLEDLEHAARAGQAQLVIGN 382 (458)
T ss_dssp TCEEEEECCHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTTSSCEE----------ESHHHHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCccCcEE----------eCCHHHHHHHHHhcCCCEEEEC
Confidence 589999999888999999999999999888644322211111122222 2366778888888999999964
Q ss_pred CCcccccHHHHHHHHHcCCcee
Q 009903 151 YGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 151 ~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
.- -..+++++|+|++
T Consensus 383 ~~-------~~~~a~k~gip~~ 397 (458)
T 3pdi_B 383 SH-------ALASARRLGVPLL 397 (458)
T ss_dssp TT-------HHHHHHHTTCCEE
T ss_pred hh-------HHHHHHHcCCCEE
Confidence 31 1246678888765
No 176
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=90.13 E-value=0.96 Score=44.76 Aligned_cols=76 Identities=7% Similarity=-0.151 Sum_probs=47.7
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCC--Ccccccc-------CeeEEcCCCCCCCCCCCHHHHHHHHH
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKD--ALHVKLA-------DESVCIGEAPSSQSYLLIPNVLSAAI 140 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~--~~~~~~a-------d~~~~~~~~~~~~~~~~~~~l~~~~~ 140 (523)
||+|||+|+ |.+|..+++.+.+.|++|++++...... .....+. .....+ ..+..+.+.+.++++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~~~~ 75 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH-----YGDLSDTSNLTRILR 75 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEEC-----CCCSSCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEE-----ECCCCCHHHHHHHHH
Confidence 468999996 8899999999999999999985432210 0001110 111111 124667788888887
Q ss_pred HcCCCEEEeCC
Q 009903 141 SRGCTMLHPGY 151 (523)
Q Consensus 141 ~~~id~Vi~~~ 151 (523)
..++|.|+-..
T Consensus 76 ~~~~d~vih~A 86 (372)
T 1db3_A 76 EVQPDEVYNLG 86 (372)
T ss_dssp HHCCSEEEECC
T ss_pred hcCCCEEEECC
Confidence 77899888553
No 177
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=90.05 E-value=1.8 Score=40.87 Aligned_cols=70 Identities=10% Similarity=0.045 Sum_probs=46.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHH-----cCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RGC 144 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~i 144 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.... .. -..+.+ |..+.+.+.+++++ .++
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~--~~~~~~-------Dl~~~~~v~~~~~~~~~~~g~i 75 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE---AK--YDHIEC-------DVTNPDQVKASIDHIFKEYGSI 75 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCS---CS--SEEEEC-------CTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccC---Cc--eEEEEe-------cCCCHHHHHHHHHHHHHHcCCC
Confidence 478999986 6789999999999999999986443320 00 122333 35556665555443 269
Q ss_pred CEEEeCCC
Q 009903 145 TMLHPGYG 152 (523)
Q Consensus 145 d~Vi~~~g 152 (523)
|.++-.-+
T Consensus 76 D~lv~~Ag 83 (264)
T 2dtx_A 76 SVLVNNAG 83 (264)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99986544
No 178
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=90.04 E-value=0.54 Score=45.54 Aligned_cols=61 Identities=11% Similarity=0.083 Sum_probs=46.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
+|+|||+|+ |.+|..+++.+.+.|++|+++.... ..+..+.+.+.++++..++|.|+-
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~~~d~vih 61 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASERIDQVYL 61 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------cCCccCHHHHHHHHHhcCCCEEEE
Confidence 468999996 8899999999999999988763211 013556778888877668999886
Q ss_pred CCC
Q 009903 150 GYG 152 (523)
Q Consensus 150 ~~g 152 (523)
..+
T Consensus 62 ~a~ 64 (321)
T 1e6u_A 62 AAA 64 (321)
T ss_dssp CCC
T ss_pred cCe
Confidence 543
No 179
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=90.03 E-value=0.51 Score=43.71 Aligned_cols=73 Identities=11% Similarity=-0.005 Sum_probs=47.9
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHc--CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~--G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~ 146 (523)
++|+|||+|+ |.+|..+++.+.+. |++|+++..+...... ....-..+.. +..+.+.+.++.+ ++|.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~-------D~~d~~~~~~~~~--~~d~ 72 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-IGGEADVFIG-------DITDADSINPAFQ--GIDA 72 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH-TTCCTTEEEC-------CTTSHHHHHHHHT--TCSE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh-cCCCeeEEEe-------cCCCHHHHHHHHc--CCCE
Confidence 4678999995 88999999999999 8999998543211100 0000122332 3667778877775 5899
Q ss_pred EEeCCC
Q 009903 147 LHPGYG 152 (523)
Q Consensus 147 Vi~~~g 152 (523)
|+-..+
T Consensus 73 vi~~a~ 78 (253)
T 1xq6_A 73 LVILTS 78 (253)
T ss_dssp EEECCC
T ss_pred EEEecc
Confidence 886543
No 180
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=89.99 E-value=0.69 Score=42.99 Aligned_cols=72 Identities=11% Similarity=0.120 Sum_probs=46.2
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHH-------
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS------- 141 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~------- 141 (523)
+.|++||+|+ |.+|..+++.+.+.|++|++++.+..... .....+. .|..+.+.+.+++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~-----~D~~~~~~v~~~~~~~~~~~~~ 74 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVK-----MTDSFTEQADQVTAEVGKLLGD 74 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECC-----CCSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------CCcEEEE-----cCCCCHHHHHHHHHHHHHHhCC
Confidence 3578999996 67899999999999999999865433221 1112221 134445555444432
Q ss_pred cCCCEEEeCCC
Q 009903 142 RGCTMLHPGYG 152 (523)
Q Consensus 142 ~~id~Vi~~~g 152 (523)
.++|.++-.-+
T Consensus 75 g~iD~lv~~Ag 85 (241)
T 1dhr_A 75 QKVDAILCVAG 85 (241)
T ss_dssp CCEEEEEECCC
T ss_pred CCCCEEEEccc
Confidence 27899886554
No 181
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=89.91 E-value=1.7 Score=42.46 Aligned_cols=93 Identities=16% Similarity=0.130 Sum_probs=59.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHH------HcC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAI------SRG 143 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~------~~~ 143 (523)
|.+|.|+|. |.++...++++++.|.+++.+. +.+... ...+.. + +...-|.+.+++++... +..
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~-d~~~~~--~~~~~~-~-----~~~~~~~~~~~ll~~~~~l~~~~~~~ 73 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAY-DINDSV--GIIDSI-S-----PQSEFFTEFEFFLDHASNLKRDSATA 73 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEE-CSSCCC--GGGGGT-C-----TTCEEESSHHHHHHHHHHHTTSTTTS
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEE-cCCHHH--HHHHhh-C-----CCCcEECCHHHHHHhhhhhhhccCCC
Confidence 578999998 6788999999999999888775 333221 122211 1 11123567888876432 457
Q ss_pred CCEEEeCCCcccccHHHHHHHHHcCCceeC
Q 009903 144 CTMLHPGYGFLAENAVFVEMCREHGINFIG 173 (523)
Q Consensus 144 id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g 173 (523)
+|+|+.+... .....++..+.+.|.+++.
T Consensus 74 vD~V~I~tP~-~~H~~~~~~al~aGkhVl~ 102 (318)
T 3oa2_A 74 LDYVSICSPN-YLHYPHIAAGLRLGCDVIC 102 (318)
T ss_dssp CCEEEECSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred CcEEEECCCc-HHHHHHHHHHHHCCCeEEE
Confidence 9999876532 1235666777778887663
No 182
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=89.88 E-value=0.35 Score=45.79 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=28.4
Q ss_pred ccEEEEEcC---cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR---GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~---g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~ 44 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN 44 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCc
Confidence 478999997 479999999999999999988644
No 183
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=89.79 E-value=1.4 Score=41.15 Aligned_cols=70 Identities=14% Similarity=0.063 Sum_probs=46.1
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHH-----cCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RGC 144 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~i 144 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.+... ... .+.+ |..+.+.+.+++++ .++
T Consensus 15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~--~~~~-------D~~~~~~~~~~~~~~~~~~g~i 82 (247)
T 1uzm_A 15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK---GLF--GVEV-------DVTDSDAVDRAFTAVEEHQGPV 82 (247)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---TSE--EEEC-------CTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH---Hhc--Ceec-------cCCCHHHHHHHHHHHHHHcCCC
Confidence 478999986 67899999999999999999864433211 111 1333 25566665555443 268
Q ss_pred CEEEeCCC
Q 009903 145 TMLHPGYG 152 (523)
Q Consensus 145 d~Vi~~~g 152 (523)
|.++-.-+
T Consensus 83 d~lv~~Ag 90 (247)
T 1uzm_A 83 EVLVSNAG 90 (247)
T ss_dssp SEEEEECS
T ss_pred CEEEECCC
Confidence 99886544
No 184
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=89.70 E-value=0.3 Score=46.63 Aligned_cols=78 Identities=10% Similarity=-0.012 Sum_probs=48.0
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-ccccc--CeeEEcCCCCCCCCCCCHHHHHHHHHHc---
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLA--DESVCIGEAPSSQSYLLIPNVLSAAISR--- 142 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~a--d~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 142 (523)
|.|++||+|+ |.+|..+++.+.+.|++|++++.+.+.... ...+. .....+. .|..+.+.+.++++..
T Consensus 20 ~~k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~Dv~d~~~v~~~~~~~~~~ 94 (272)
T 2nwq_A 20 MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLT-----LDVRDRAAMSAAVDNLPEE 94 (272)
T ss_dssp -CCEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEE-----CCTTCHHHHHHHHHTCCGG
T ss_pred cCcEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEE-----cCCCCHHHHHHHHHHHHHH
Confidence 3478999986 568999999999999999988543221110 00010 1121111 2466777777777653
Q ss_pred --CCCEEEeCCC
Q 009903 143 --GCTMLHPGYG 152 (523)
Q Consensus 143 --~id~Vi~~~g 152 (523)
++|.++-.-|
T Consensus 95 ~g~iD~lvnnAG 106 (272)
T 2nwq_A 95 FATLRGLINNAG 106 (272)
T ss_dssp GSSCCEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 5798886544
No 185
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=89.70 E-value=0.4 Score=45.89 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=30.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~ 104 (523)
.++|||+|+|..|.+.++.+.+.|.+|++++++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4789999999999999999999999999997543
No 186
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=89.51 E-value=2.4 Score=39.82 Aligned_cols=119 Identities=7% Similarity=0.024 Sum_probs=62.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
.++|+|+|.|..|..+++.+.+.|+..+.+. |.+.... ..+..+.++-. .+. .....+.+.+.+++.+++.-+..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lv-D~d~v~~-sNL~Rq~l~~~--~di-G~~Ka~~~~~~l~~~np~~~v~~ 102 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLA-DDDDVHL-SNLQRQILFTT--EDI-DRPKSQVSQQRLTQLNPDIQLTA 102 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEE-CCCBCCG-GGTTTCTTCCG--GGT-TSBHHHHHHHHHHHHCTTSEEEE
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEE-eCCCccc-ccCCCCccCCh--hhC-CCHHHHHHHHHHHHHCCCCEEEE
Confidence 5799999999999999999999999654443 3332211 11111111100 000 12235566666666665532221
Q ss_pred -CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCC
Q 009903 151 -YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTV 200 (523)
Q Consensus 151 -~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p 200 (523)
..... ...+.+.+....+-+...+... .|....+.+.+.|+|..
T Consensus 103 ~~~~~~-~~~~~~~~~~~DvVi~~~d~~~-----~r~~l~~~~~~~~~p~i 147 (251)
T 1zud_1 103 LQQRLT-GEALKDAVARADVVLDCTDNMA-----TRQEINAACVALNTPLI 147 (251)
T ss_dssp ECSCCC-HHHHHHHHHHCSEEEECCSSHH-----HHHHHHHHHHHTTCCEE
T ss_pred EeccCC-HHHHHHHHhcCCEEEECCCCHH-----HHHHHHHHHHHhCCCEE
Confidence 11111 1234455666665443333211 25566777777887754
No 187
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=89.46 E-value=1.4 Score=42.91 Aligned_cols=74 Identities=9% Similarity=-0.040 Sum_probs=48.2
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccc----cC--eeEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009903 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKL----AD--ESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~----ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 143 (523)
|+|||+|+ |.+|..+++.+.+.|++|++++........ ...+ .. ..+.. +..+.+.+.++.+..+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~~~~~~~~~~~~~~ 73 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEG-------DIRNEALMTEILHDHA 73 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEEC-------CTTCHHHHHHHHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEc-------cCCCHHHHHHHhhccC
Confidence 37999986 889999999999999999988532211110 0000 11 12222 3667777877777668
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.|+-.-+
T Consensus 74 ~D~vih~A~ 82 (338)
T 1udb_A 74 IDTVIHFAG 82 (338)
T ss_dssp CSEEEECCS
T ss_pred CCEEEECCc
Confidence 999985443
No 188
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=89.45 E-value=0.57 Score=44.13 Aligned_cols=76 Identities=11% Similarity=0.083 Sum_probs=47.2
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccC--eeEEcCCCCCCCCCCCHHHHHHHHHHc---
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR--- 142 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 142 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.+.+.... ...+.. ..+.+ |..+.+.+.+++++.
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~v~~~~~~~~~~ 79 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQM-------DVTRQDSIDAAIAATVEH 79 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC-------CTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEe-------eCCCHHHHHHHHHHHHHH
Confidence 3578999996 678999999999999999988543221110 011111 22322 355666665555433
Q ss_pred --CCCEEEeCCC
Q 009903 143 --GCTMLHPGYG 152 (523)
Q Consensus 143 --~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 80 ~g~id~lv~~Ag 91 (259)
T 4e6p_A 80 AGGLDILVNNAA 91 (259)
T ss_dssp SSSCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 7999886544
No 189
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=89.36 E-value=0.69 Score=44.05 Aligned_cols=76 Identities=13% Similarity=0.068 Sum_probs=48.2
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccc-cccC--eeEEcCCCCCCCCCCCHHHHHHHHHHc---
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR--- 142 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-~~ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 142 (523)
++|++||+|+ |.+|..+++.+.+.|++|++++.+.+...... .+.. ..+.+ |..+.+.+.+++++.
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~~~~~~~~~~~~ 76 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISL-------DVTDGERIDVVAADVLAR 76 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEEC-------CTTCHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEe-------eCCCHHHHHHHHHHHHHh
Confidence 3578999986 67899999999999999998864432211100 1111 22222 355666666655543
Q ss_pred --CCCEEEeCCC
Q 009903 143 --GCTMLHPGYG 152 (523)
Q Consensus 143 --~id~Vi~~~g 152 (523)
++|.|+-.-+
T Consensus 77 ~g~id~lv~~Ag 88 (281)
T 3m1a_A 77 YGRVDVLVNNAG 88 (281)
T ss_dssp HSCCSEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 7999886543
No 190
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=89.35 E-value=0.91 Score=41.98 Aligned_cols=75 Identities=9% Similarity=0.086 Sum_probs=46.7
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcC--CcEEEEecCCCCCCccccc-c-C-eeEEcCCCCCCCCCCCHHHHHHHHHHc--
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMG--IPCVAVYSTIDKDALHVKL-A-D-ESVCIGEAPSSQSYLLIPNVLSAAISR-- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G--~~vi~v~~~~~~~~~~~~~-a-d-~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 142 (523)
.|++||+|+ |.+|..+++.+.+.| ++|++++.+.+........ . . ..+.+ +..+.+.+.+++++.
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~ 75 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPL-------TVTCDKSLDTFVSKVGE 75 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEEC-------CTTCHHHHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEe-------ecCCHHHHHHHHHHHHH
Confidence 478999986 678999999999999 9999986443321111111 1 1 12222 355555555554432
Q ss_pred -----CCCEEEeCCC
Q 009903 143 -----GCTMLHPGYG 152 (523)
Q Consensus 143 -----~id~Vi~~~g 152 (523)
++|.|+-..+
T Consensus 76 ~~g~~~id~li~~Ag 90 (250)
T 1yo6_A 76 IVGSDGLSLLINNAG 90 (250)
T ss_dssp HHGGGCCCEEEECCC
T ss_pred hcCCCCCcEEEECCc
Confidence 7999986544
No 191
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=89.34 E-value=0.73 Score=48.95 Aligned_cols=109 Identities=12% Similarity=0.061 Sum_probs=67.5
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009903 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (523)
Q Consensus 72 k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~~ 151 (523)
++++|+|.|..|..+++.+.+.|+++++++.+++.... +. ..+. + +..+.+.+ +.+.-.+.|+++...
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~---~~-~~i~-g------D~t~~~~L-~~agi~~ad~vi~~~ 416 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCN---DH-VVVY-G------DATVGQTL-RQAGIDRASGIIVTT 416 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCC---SS-CEEE-S------CSSSSTHH-HHHTTTSCSEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhh---cC-CEEE-e------CCCCHHHH-HhcCccccCEEEEEC
Confidence 89999999999999999999999999999766654332 22 3343 2 23343344 444446789998877
Q ss_pred CcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCC
Q 009903 152 GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (523)
Q Consensus 152 g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip 198 (523)
+....+......++++|. ....+....|... .+.+++.|+.
T Consensus 417 ~~d~~ni~~~~~ak~l~~-----~~~iiar~~~~~~-~~~l~~~G~d 457 (565)
T 4gx0_A 417 NDDSTNIFLTLACRHLHS-----HIRIVARANGEEN-VDQLYAAGAD 457 (565)
T ss_dssp SCHHHHHHHHHHHHHHCS-----SSEEEEEESSTTS-HHHHHHHTCS
T ss_pred CCchHHHHHHHHHHHHCC-----CCEEEEEECCHHH-HHHHHHcCCC
Confidence 643333444455566653 2222333333332 2345667765
No 192
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=89.26 E-value=0.53 Score=43.55 Aligned_cols=73 Identities=11% Similarity=0.080 Sum_probs=44.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCC--cEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGI--PCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~--~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
.|+|||+|+ |.+|..+++.+.+.|+ +|++++.+.+.......-.-..+.. |..+.+.+.++++ ++|.|
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~-------D~~d~~~~~~~~~--~~d~v 88 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVV-------DFEKLDDYASAFQ--GHDVG 88 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEEC-------CGGGGGGGGGGGS--SCSEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEec-------CcCCHHHHHHHhc--CCCEE
Confidence 468999995 8899999999999999 9998865443221100000112222 2333344444443 68998
Q ss_pred EeCCC
Q 009903 148 HPGYG 152 (523)
Q Consensus 148 i~~~g 152 (523)
+-..+
T Consensus 89 i~~ag 93 (242)
T 2bka_A 89 FCCLG 93 (242)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 86554
No 193
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=89.07 E-value=0.61 Score=43.80 Aligned_cols=33 Identities=12% Similarity=0.045 Sum_probs=28.2
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
|.|++||+|+ |.+|..+++.+.+.|++|++++.
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 34 (256)
T 1geg_A 1 MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADY 34 (256)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 4578999986 67899999999999999998854
No 194
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=89.05 E-value=1.4 Score=43.13 Aligned_cols=89 Identities=16% Similarity=0.133 Sum_probs=55.2
Q ss_pred ccEEEEEcCcHHHHH-HHHHHHHcCCcEEEEecCCCCCCcccccc--CeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 71 QEKILVANRGEIAVR-VIRTAHEMGIPCVAVYSTIDKDALHVKLA--DESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~-vi~aa~~~G~~vi~v~~~~~~~~~~~~~a--d~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
+|+|.|+|.|.+|.. +++-++++|++|.+.+....+. ....+. .-.+..+ .+.+.+.. ..+|.|
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~-~~~~L~~~gi~v~~g--------~~~~~l~~----~~~d~v 70 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPP-MSTQLEALGIDVYEG--------FDAAQLDE----FKADVY 70 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTT-HHHHHHHTTCEEEES--------CCGGGGGS----CCCSEE
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcH-HHHHHHhCCCEEECC--------CCHHHcCC----CCCCEE
Confidence 578999999999985 8899999999999986543221 111121 1122222 11111110 258999
Q ss_pred EeCCCcccccHHHHHHHHHcCCceeC
Q 009903 148 HPGYGFLAENAVFVEMCREHGINFIG 173 (523)
Q Consensus 148 i~~~g~~~e~~~~a~~~~~~gl~~~g 173 (523)
+...+...+++. ...+.+.|+++++
T Consensus 71 V~Spgi~~~~p~-~~~a~~~gi~v~~ 95 (326)
T 3eag_A 71 VIGNVAKRGMDV-VEAILNLGLPYIS 95 (326)
T ss_dssp EECTTCCTTCHH-HHHHHHTTCCEEE
T ss_pred EECCCcCCCCHH-HHHHHHcCCcEEe
Confidence 887765444544 4556788999884
No 195
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=89.05 E-value=0.82 Score=45.59 Aligned_cols=75 Identities=11% Similarity=0.034 Sum_probs=46.9
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcC-CcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMG-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G-~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
+|+|||+|+ |.+|..+++.+.+.| ++|++++..................+. .+..+.+.+.++++ ++|.|+
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~-----~Dl~d~~~l~~~~~--~~d~Vi 104 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSE-----TSITDDALLASLQD--EYDYVF 104 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEEC-----SCTTCHHHHHHCCS--CCSEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEE-----CCCCCHHHHHHHhh--CCCEEE
Confidence 468999996 889999999999999 999998543222110010011111111 24556666666554 799988
Q ss_pred eCCC
Q 009903 149 PGYG 152 (523)
Q Consensus 149 ~~~g 152 (523)
-..+
T Consensus 105 h~A~ 108 (377)
T 2q1s_A 105 HLAT 108 (377)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 6543
No 196
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=88.99 E-value=1.2 Score=42.13 Aligned_cols=76 Identities=9% Similarity=0.002 Sum_probs=47.6
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-ccccC--eeEEcCCCCCCCCCCCHHHHHHHHHHc---
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR--- 142 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~~ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 142 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.+.+..... ..+.. ..+.+ |..+.+.+.+++++.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVV-------DLTNEVSVRALIDFTIDT 82 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEEC-------CTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEEC-------CCCCHHHHHHHHHHHHHH
Confidence 3578999996 6789999999999999999986443321110 01111 22222 355666665555432
Q ss_pred --CCCEEEeCCC
Q 009903 143 --GCTMLHPGYG 152 (523)
Q Consensus 143 --~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 83 ~g~id~lv~nAg 94 (271)
T 3tzq_B 83 FGRLDIVDNNAA 94 (271)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 7998886544
No 197
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=88.96 E-value=0.49 Score=44.61 Aligned_cols=77 Identities=9% Similarity=0.028 Sum_probs=47.7
Q ss_pred CCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCC-cc----ccccCe--eEEcCCCCCCCCCCCHHHHHHHHH
Q 009903 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDA-LH----VKLADE--SVCIGEAPSSQSYLLIPNVLSAAI 140 (523)
Q Consensus 69 ~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~-~~----~~~ad~--~~~~~~~~~~~~~~~~~~l~~~~~ 140 (523)
.++|++||+|+ +.+|..+++.+.+.|++|+++........ .. ...... .+.+ |..+.+.+.++++
T Consensus 5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~~~~~v~~~~~ 77 (264)
T 3i4f_A 5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQA-------DVTKKEDLHKIVE 77 (264)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEEC-------CTTSHHHHHHHHH
T ss_pred cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEe-------cCCCHHHHHHHHH
Confidence 35688999996 67899999999999999998853321100 00 001111 2222 3556666666555
Q ss_pred Hc-----CCCEEEeCCC
Q 009903 141 SR-----GCTMLHPGYG 152 (523)
Q Consensus 141 ~~-----~id~Vi~~~g 152 (523)
+. ++|.++-..+
T Consensus 78 ~~~~~~g~id~lv~~Ag 94 (264)
T 3i4f_A 78 EAMSHFGKIDFLINNAG 94 (264)
T ss_dssp HHHHHHSCCCEEECCCC
T ss_pred HHHHHhCCCCEEEECCc
Confidence 43 7999986544
No 198
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=88.91 E-value=0.67 Score=43.85 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=27.8
Q ss_pred cCCCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 67 VTCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 67 ~~~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
..-|.|++||+|+ +.+|..+++.+.+.|++|+++.
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~ 57 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHY 57 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 3345688999986 6789999999999999997764
No 199
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=88.79 E-value=0.75 Score=42.89 Aligned_cols=77 Identities=9% Similarity=0.042 Sum_probs=46.7
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC-CCCCCcc-ccc---cCeeEEcCCCCCCCCCCCHHHHHHHHHHc--
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST-IDKDALH-VKL---ADESVCIGEAPSSQSYLLIPNVLSAAISR-- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~-~~~~~~~-~~~---ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 142 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+ .+..... ..+ ......+. .|..+.+.+.+++++.
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~~~ 81 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA-----ADLATSEACQQLVDEFVA 81 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEE-----CCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEE-----CCCCCHHHHHHHHHHHHH
Confidence 478999986 778999999999999999998644 2211100 000 11121111 1355666666555432
Q ss_pred ---CCCEEEeCCC
Q 009903 143 ---GCTMLHPGYG 152 (523)
Q Consensus 143 ---~id~Vi~~~g 152 (523)
++|.|+-.-+
T Consensus 82 ~~g~id~vi~~Ag 94 (258)
T 3afn_B 82 KFGGIDVLINNAG 94 (258)
T ss_dssp HHSSCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 7999886544
No 200
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=88.78 E-value=0.6 Score=44.70 Aligned_cols=62 Identities=11% Similarity=0.087 Sum_probs=45.8
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
|+|||+|+ |.+|..+++.+. .|++|++++.... .+. .+..+.+.+.++.+..++|.|+-.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------~~~-------~D~~d~~~~~~~~~~~~~d~vih~ 61 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------EFC-------GDFSNPKGVAETVRKLRPDVIVNA 61 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------SSC-------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------ccc-------ccCCCHHHHHHHHHhcCCCEEEEC
Confidence 37999997 889999999999 8999999853220 111 235677788888777789998865
Q ss_pred CC
Q 009903 151 YG 152 (523)
Q Consensus 151 ~g 152 (523)
.+
T Consensus 62 a~ 63 (299)
T 1n2s_A 62 AA 63 (299)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 201
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=88.76 E-value=1.5 Score=43.82 Aligned_cols=74 Identities=12% Similarity=0.042 Sum_probs=49.2
Q ss_pred cEEEEEcC-cHHHHHHHHHHH-HcCCcEEEEecCCCCCCc------cccc------------c-----CeeEEcCCCCCC
Q 009903 72 EKILVANR-GEIAVRVIRTAH-EMGIPCVAVYSTIDKDAL------HVKL------------A-----DESVCIGEAPSS 126 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~-~~G~~vi~v~~~~~~~~~------~~~~------------a-----d~~~~~~~~~~~ 126 (523)
|+|||+|+ |.+|..+++.+. +.|++|++++........ ...+ . -+.+..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 76 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVG------ 76 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEES------
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEEC------
Confidence 48999996 889999999999 999999998643322100 0011 0 112322
Q ss_pred CCCCCHHHHHHHHHHcC-CCEEEeCCC
Q 009903 127 QSYLLIPNVLSAAISRG-CTMLHPGYG 152 (523)
Q Consensus 127 ~~~~~~~~l~~~~~~~~-id~Vi~~~g 152 (523)
+..+.+.+.+++++.+ +|.|+-..+
T Consensus 77 -Dl~d~~~~~~~~~~~~~~d~vih~A~ 102 (397)
T 1gy8_A 77 -DVRNEDFLNGVFTRHGPIDAVVHMCA 102 (397)
T ss_dssp -CTTCHHHHHHHHHHSCCCCEEEECCC
T ss_pred -CCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 4667778888877767 999886543
No 202
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=88.71 E-value=1.1 Score=42.65 Aligned_cols=75 Identities=12% Similarity=0.055 Sum_probs=46.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccc-cc---c--CeeEEcCCCCCCCCCCCHHHHHHHHHHc-
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL---A--DESVCIGEAPSSQSYLLIPNVLSAAISR- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-~~---a--d~~~~~~~~~~~~~~~~~~~l~~~~~~~- 142 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+...... .+ . -..+.+ |..+.+.+.+++++.
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC-------DVTQPDQVRGMLDQMT 104 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEEC-------CTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEc-------CCCCHHHHHHHHHHHH
Confidence 478999996 67899999999999999999864332211100 00 0 112222 355666665555432
Q ss_pred ----CCCEEEeCCC
Q 009903 143 ----GCTMLHPGYG 152 (523)
Q Consensus 143 ----~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 105 ~~~g~iD~lvnnAg 118 (276)
T 3r1i_A 105 GELGGIDIAVCNAG 118 (276)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 7898886544
No 203
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=88.66 E-value=1.4 Score=41.95 Aligned_cols=37 Identities=14% Similarity=0.123 Sum_probs=29.6
Q ss_pred CccCCCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 65 LKVTCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 65 ~~~~~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
++...+.|++||+|+ +.+|..+++.+.+.|++|++++
T Consensus 19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~ 56 (281)
T 3v2h_A 19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNG 56 (281)
T ss_dssp ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 444556789999996 6789999999999999999885
No 204
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=88.66 E-value=0.49 Score=45.05 Aligned_cols=33 Identities=3% Similarity=-0.054 Sum_probs=30.4
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
|+.+|+|+|+|..|..++..|++.|++|++++.
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 567999999999999999999999999999964
No 205
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=88.56 E-value=0.76 Score=43.35 Aligned_cols=75 Identities=17% Similarity=0.101 Sum_probs=46.3
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccC--eeEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~---- 142 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.+.... ...+.. ..+.+ |..+.+.+.+++++.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~v~~~~~~~~~~~ 79 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHL-------DVTQPAQWKAAVDTAVTAF 79 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEe-------cCCCHHHHHHHHHHHHHHc
Confidence 478999996 678999999999999999988543221110 001111 12222 355666655554432
Q ss_pred -CCCEEEeCCC
Q 009903 143 -GCTMLHPGYG 152 (523)
Q Consensus 143 -~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 80 g~iD~lv~~Ag 90 (260)
T 1nff_A 80 GGLHVLVNNAG 90 (260)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7999886544
No 206
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=88.50 E-value=1.4 Score=41.04 Aligned_cols=75 Identities=12% Similarity=-0.012 Sum_probs=48.3
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccC-eeEEcCCCCCCCCCCCHHHHHHHHHHc-CCCEE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD-ESVCIGEAPSSQSYLLIPNVLSAAISR-GCTML 147 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad-~~~~~~~~~~~~~~~~~~~l~~~~~~~-~id~V 147 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.+.......+.. ..+.+ |..+.+.+.++.++. ++|.+
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~id~l 78 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVL-------DVTKKKQIDQFANEVERLDVL 78 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEEC-------CTTCHHHHHHHHHHCSCCSEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEe-------eCCCHHHHHHHHHHhCCCCEE
Confidence 478999986 678999999999999999998543221111111111 12222 356677777666654 68998
Q ss_pred EeCCC
Q 009903 148 HPGYG 152 (523)
Q Consensus 148 i~~~g 152 (523)
+-.-+
T Consensus 79 v~~Ag 83 (246)
T 2ag5_A 79 FNVAG 83 (246)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 86544
No 207
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=88.47 E-value=0.57 Score=43.41 Aligned_cols=75 Identities=20% Similarity=0.108 Sum_probs=48.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcccc-cc-CeeEEcCCCCCCCCCCCHHHHHHHHHHc-CCCE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-LA-DESVCIGEAPSSQSYLLIPNVLSAAISR-GCTM 146 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~-~a-d~~~~~~~~~~~~~~~~~~~l~~~~~~~-~id~ 146 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+......... .. -+.+.. |..+.+.+.+++++. ++|.
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~id~ 79 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCV-------DLGDWDATEKALGGIGPVDL 79 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEEC-------CTTCHHHHHHHHTTCCCCSE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEe-------cCCCHHHHHHHHHHcCCCCE
Confidence 478999996 789999999999999999988543221100000 11 122332 366777777777654 5898
Q ss_pred EEeCCC
Q 009903 147 LHPGYG 152 (523)
Q Consensus 147 Vi~~~g 152 (523)
|+-..+
T Consensus 80 vi~~Ag 85 (244)
T 1cyd_A 80 LVNNAA 85 (244)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 886544
No 208
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=88.36 E-value=0.5 Score=45.62 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=29.8
Q ss_pred CCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 69 ~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|+|+|||+|+ |.+|..+++.+.+.|++|++++..
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 45789999997 889999999999999999999543
No 209
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=88.31 E-value=1.4 Score=42.08 Aligned_cols=65 Identities=9% Similarity=-0.026 Sum_probs=45.2
Q ss_pred CCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 69 ~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
.++|+|||+|+ |.+|..+++.+.+.|+ . .. . ....+ .....+..+.+.+.++++..++|.|
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-----~-~~---~-------~~~~~--~~~~~D~~d~~~~~~~~~~~~~d~V 65 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG-----L-PG---E-------DWVFV--SSKDADLTDTAQTRALFEKVQPTHV 65 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC-----C-TT---C-------EEEEC--CTTTCCTTSHHHHHHHHHHSCCSEE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC-----c-cc---c-------ccccc--CceecccCCHHHHHHHHhhcCCCEE
Confidence 35689999996 8899999999999998 0 00 0 00111 1112356788888888888889998
Q ss_pred EeCC
Q 009903 148 HPGY 151 (523)
Q Consensus 148 i~~~ 151 (523)
+-..
T Consensus 66 ih~A 69 (319)
T 4b8w_A 66 IHLA 69 (319)
T ss_dssp EECC
T ss_pred EECc
Confidence 8553
No 210
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=88.28 E-value=0.58 Score=43.57 Aligned_cols=88 Identities=7% Similarity=-0.000 Sum_probs=54.0
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHH-cCCCEEE
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-RGCTMLH 148 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~-~~id~Vi 148 (523)
+.++|.|+|.|.+|..+++.+++.|++|+.++... ...-+| .+.++ ......++.-+.. .+.+.++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~-----~~~~aD-ilavP-------~~ai~~vl~~l~~~l~~g~iv 71 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPE-----DIRDFE-LVVID-------AHGVEGYVEKLSAFARRGQMF 71 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSGG-----GGGGCS-EEEEC-------SSCHHHHHHHHHTTCCTTCEE
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHH-----HhccCC-EEEEc-------HHHHHHHHHHHHHhcCCCCEE
Confidence 34689999999999999999999999998875321 134577 66664 2345555554432 3445444
Q ss_pred e-CCCcccccHHHHHHHHHcCCcee
Q 009903 149 P-GYGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 149 ~-~~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
. +.+... ..+.+.+...|..++
T Consensus 72 vd~sgs~~--~~vl~~~~~~g~~fv 94 (232)
T 3dfu_A 72 LHTSLTHG--ITVMDPLETSGGIVM 94 (232)
T ss_dssp EECCSSCC--GGGGHHHHHTTCEEE
T ss_pred EEECCcCH--HHHHHHHHhCCCcEE
Confidence 3 233321 123334445676554
No 211
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=88.28 E-value=0.77 Score=42.55 Aligned_cols=75 Identities=20% Similarity=0.123 Sum_probs=48.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-ccc-cCeeEEcCCCCCCCCCCCHHHHHHHHHHc-CCCE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKL-ADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTM 146 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-~id~ 146 (523)
.|+|||+|+ |.+|..+++.+.+.|++|++++.+.+..... ..+ ..+.+.. |..+.+.+.+++++. ++|.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~id~ 79 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCV-------DLGDWEATERALGSVGPVDL 79 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEEC-------CTTCHHHHHHHHTTCCCCCE
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEE-------eCCCHHHHHHHHHHcCCCCE
Confidence 478999996 7899999999999999999885432111000 001 1122333 366777777777654 5899
Q ss_pred EEeCCC
Q 009903 147 LHPGYG 152 (523)
Q Consensus 147 Vi~~~g 152 (523)
|+-..+
T Consensus 80 vi~~Ag 85 (244)
T 3d3w_A 80 LVNNAA 85 (244)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 886544
No 212
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=88.27 E-value=0.68 Score=43.67 Aligned_cols=75 Identities=16% Similarity=0.174 Sum_probs=46.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-ccc---cCe--eEEcCCCCCCCCCCCHHHHHHHHHH--
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKL---ADE--SVCIGEAPSSQSYLLIPNVLSAAIS-- 141 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~~---ad~--~~~~~~~~~~~~~~~~~~l~~~~~~-- 141 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+..... ..+ ... .+.+ |..+.+.+.++++.
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHAC-------DLSHSDAIAAFATGVL 101 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEEC-------CTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEe-------cCCCHHHHHHHHHHHH
Confidence 478999986 6789999999999999999885432211100 000 111 2222 35566666655544
Q ss_pred ---cCCCEEEeCCC
Q 009903 142 ---RGCTMLHPGYG 152 (523)
Q Consensus 142 ---~~id~Vi~~~g 152 (523)
.++|.|+-..+
T Consensus 102 ~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 102 AAHGRCDVLVNNAG 115 (262)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 36999886644
No 213
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=88.26 E-value=1.1 Score=46.69 Aligned_cols=110 Identities=14% Similarity=0.150 Sum_probs=65.4
Q ss_pred ccEEEEEcCcHHHHH-HHHHHHHcCCcEEEEecCCCCCCcccccc--CeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 71 QEKILVANRGEIAVR-VIRTAHEMGIPCVAVYSTIDKDALHVKLA--DESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~-vi~aa~~~G~~vi~v~~~~~~~~~~~~~a--d~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
+|+|+|+|-|.+|.. +++.|+++|++|.+.+.... .....+. .-.+..+ .+.+.+ .++|.|
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~--~~~~~l~~~gi~~~~g--------~~~~~~------~~~d~v 85 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN--SVTQHLTALGAQIYFH--------HRPENV------LDASVV 85 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTCEEESS--------CCGGGG------TTCSEE
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC--HHHHHHHHCCCEEECC--------CCHHHc------CCCCEE
Confidence 589999999988885 89999999999999854322 1111121 1122222 111111 248988
Q ss_pred EeCCCcccccHHHHHHHHHcCCceeCCCHHHH-HHhCC---------------HHHHHHHHHHCCCC
Q 009903 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSI-RIMGD---------------KSTARETMKNAGVP 198 (523)
Q Consensus 148 i~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~-~~~~d---------------K~~~r~~l~~~Gip 198 (523)
+...+....++. ...+.+.|+++++ ..+.+ +.++. +.....+|++.|..
T Consensus 86 V~Spgi~~~~p~-~~~a~~~gi~v~~-~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~ 150 (494)
T 4hv4_A 86 VVSTAISADNPE-IVAAREARIPVIR-RAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGLD 150 (494)
T ss_dssp EECTTSCTTCHH-HHHHHHTTCCEEE-HHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTTCC
T ss_pred EECCCCCCCCHH-HHHHHHCCCCEEc-HHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcCCC
Confidence 877765444544 3556678899874 34433 33333 34555566666653
No 214
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.21 E-value=0.76 Score=43.35 Aligned_cols=77 Identities=16% Similarity=0.034 Sum_probs=47.0
Q ss_pred ccEEEEEcC-c-HHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccc----cCeeEEcCCCCCCCCCCCHHHHHHHHHHc-
Q 009903 71 QEKILVANR-G-EIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKL----ADESVCIGEAPSSQSYLLIPNVLSAAISR- 142 (523)
Q Consensus 71 ~k~ILi~g~-g-~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~----ad~~~~~~~~~~~~~~~~~~~l~~~~~~~- 142 (523)
.|++||+|+ | .+|..+++.+.+.|++|++++.+.+.... ...+ ......+. .|..+.+.+.+++++.
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-----~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV-----CDVTSTEAVDALITQTV 96 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEE-----CCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEE-----eCCCCHHHHHHHHHHHH
Confidence 578999998 6 59999999999999999998543221110 0001 11121111 1355666665555433
Q ss_pred ----CCCEEEeCCC
Q 009903 143 ----GCTMLHPGYG 152 (523)
Q Consensus 143 ----~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 97 ~~~g~id~li~~Ag 110 (266)
T 3o38_A 97 EKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHhCCCcEEEECCC
Confidence 7999886544
No 215
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=88.14 E-value=0.72 Score=44.00 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=29.1
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 44 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN 44 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4688999986 678999999999999999988543
No 216
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=88.10 E-value=0.97 Score=42.90 Aligned_cols=75 Identities=11% Similarity=0.051 Sum_probs=46.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccC-eeEEcCCCCCCCCCCCHHHHHHHHHHc-----
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLAD-ESVCIGEAPSSQSYLLIPNVLSAAISR----- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad-~~~~~~~~~~~~~~~~~~~l~~~~~~~----- 142 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.+.... ...+.. ..+.+ |..+.+.+.+++++.
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~~~~~g 81 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILC-------DVTQEDDVKTLVSETIRRFG 81 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEEC-------CTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEc-------CCCCHHHHHHHHHHHHHHcC
Confidence 578999986 678999999999999999988543221110 001111 22332 355666665554432
Q ss_pred CCCEEEeCCC
Q 009903 143 GCTMLHPGYG 152 (523)
Q Consensus 143 ~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 82 ~iD~lv~nAg 91 (270)
T 1yde_A 82 RLDCVVNNAG 91 (270)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999886544
No 217
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=88.07 E-value=1.2 Score=42.82 Aligned_cols=67 Identities=12% Similarity=0.023 Sum_probs=47.6
Q ss_pred EEEEEcC-cHHHHHHHHHHHHc--CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 73 KILVANR-GEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 73 ~ILi~g~-g~~~~~vi~aa~~~--G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
+|||+|+ |.+|..+++.+.+. |++|++++....... .-..+.. +..+.+.+.+++++.++|.|+-
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~-------D~~d~~~~~~~~~~~~~d~vih 68 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITL-------DVSNRDEIDRAVEKYSIDAIFH 68 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEEC-------CTTCHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEe-------cCCCHHHHHHHHhhcCCcEEEE
Confidence 4899995 78999999999998 899998854322111 1123333 3667788888887778999985
Q ss_pred CC
Q 009903 150 GY 151 (523)
Q Consensus 150 ~~ 151 (523)
..
T Consensus 69 ~a 70 (317)
T 3ajr_A 69 LA 70 (317)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 218
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=88.02 E-value=1.7 Score=42.63 Aligned_cols=73 Identities=11% Similarity=-0.042 Sum_probs=48.1
Q ss_pred EEEEEcC-cHHHHHHHHHHHHc-CCcEEEEecCCCCC--Ccccccc---C-eeEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009903 73 KILVANR-GEIAVRVIRTAHEM-GIPCVAVYSTIDKD--ALHVKLA---D-ESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (523)
Q Consensus 73 ~ILi~g~-g~~~~~vi~aa~~~-G~~vi~v~~~~~~~--~~~~~~a---d-~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 144 (523)
+|||+|+ |.+|..+++.+.+. |++|++++...... .....+. . +.+.. +..+.+.+.+++++.++
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~ 74 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHA-------DICDSAEITRIFEQYQP 74 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEEC-------CTTCHHHHHHHHHHHCC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEEC-------CCCCHHHHHHHHhhcCC
Confidence 6999996 88999999999998 79999886432111 1111110 1 12222 46677888888876789
Q ss_pred CEEEeCCC
Q 009903 145 TMLHPGYG 152 (523)
Q Consensus 145 d~Vi~~~g 152 (523)
|.|+-..+
T Consensus 75 d~vih~A~ 82 (361)
T 1kew_A 75 DAVMHLAA 82 (361)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 99986543
No 219
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=87.85 E-value=1 Score=42.75 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=28.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|++||+|+ |.+|..+++.+.+.|++|+++..
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r 64 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLKVVGCAR 64 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEC
Confidence 478999986 67899999999999999998854
No 220
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=87.81 E-value=2.8 Score=40.74 Aligned_cols=34 Identities=9% Similarity=-0.012 Sum_probs=28.9
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~ 79 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLC 79 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecc
Confidence 4578999986 678999999999999999998543
No 221
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=87.78 E-value=1 Score=44.34 Aligned_cols=71 Identities=8% Similarity=-0.141 Sum_probs=48.3
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcC-----CcEEEEecCCCCCCccccccC-eeEEcCCCCCCCCCCCHHHHHHHHHHcC-
Q 009903 72 EKILVANR-GEIAVRVIRTAHEMG-----IPCVAVYSTIDKDALHVKLAD-ESVCIGEAPSSQSYLLIPNVLSAAISRG- 143 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~G-----~~vi~v~~~~~~~~~~~~~ad-~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 143 (523)
|+|||+|+ |.+|..+++.+.+.| ++|++++....... ..... +.+.. +..+.+.+.++++..+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~ 72 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HEDNPINYVQC-------DISDPDDSQAKLSPLTD 72 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CCSSCCEEEEC-------CTTSHHHHHHHHTTCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cccCceEEEEe-------ecCCHHHHHHHHhcCCC
Confidence 68999996 889999999999999 99999864433221 11011 22222 3667777877776555
Q ss_pred CCEEEeCC
Q 009903 144 CTMLHPGY 151 (523)
Q Consensus 144 id~Vi~~~ 151 (523)
+|.|+-..
T Consensus 73 ~d~vih~a 80 (364)
T 2v6g_A 73 VTHVFYVT 80 (364)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 99988654
No 222
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=87.75 E-value=0.53 Score=43.23 Aligned_cols=85 Identities=6% Similarity=0.020 Sum_probs=50.8
Q ss_pred ccEEEEEcCcHHHHHHHHH--HHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 71 QEKILVANRGEIAVRVIRT--AHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~a--a~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
.++|+|+|+|..|..+++. ... |++++.+. |.++...........+. ..+++.+++++ ++|.|+
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~-D~dp~k~g~~i~gv~V~-----------~~~dl~ell~~-~ID~Vi 145 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFF-DVDPEKVGRPVRGGVIE-----------HVDLLPQRVPG-RIEIAL 145 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEE-ESCTTTTTCEETTEEEE-----------EGGGHHHHSTT-TCCEEE
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEE-eCCHHHHhhhhcCCeee-----------cHHhHHHHHHc-CCCEEE
Confidence 4689999999999998885 334 88887775 33333323333332221 12346666666 899988
Q ss_pred eCCCcccccHHHHHHHHHcCCc
Q 009903 149 PGYGFLAENAVFVEMCREHGIN 170 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~ 170 (523)
.+.... ....+++.+.+.|++
T Consensus 146 IA~Ps~-~~~ei~~~l~~aGi~ 166 (211)
T 2dt5_A 146 LTVPRE-AAQKAADLLVAAGIK 166 (211)
T ss_dssp ECSCHH-HHHHHHHHHHHHTCC
T ss_pred EeCCch-hHHHHHHHHHHcCCC
Confidence 664321 123455556666655
No 223
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=87.75 E-value=1.7 Score=40.30 Aligned_cols=103 Identities=15% Similarity=0.114 Sum_probs=60.1
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCCC
Q 009903 73 KILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGYG 152 (523)
Q Consensus 73 ~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~~g 152 (523)
+|.|+|.|.+|..+++.+.+.|++++.+. +.+... +. . +.+.+++++ .++|+|+.+..
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~-d~~~~~------~~-~----------~~~~~~l~~----~~~DvVv~~~~ 59 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAIL-DVRGEH------EK-M----------VRGIDEFLQ----REMDVAVEAAS 59 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEE-CSSCCC------TT-E----------ESSHHHHTT----SCCSEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEE-ecCcch------hh-h----------cCCHHHHhc----CCCCEEEECCC
Confidence 79999999999999999998999986553 222111 11 1 345555543 46999997653
Q ss_pred cccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCC
Q 009903 153 FLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (523)
Q Consensus 153 ~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip 198 (523)
.. ........+.+.|..++..++-+.....-...+.+.+++.|+.
T Consensus 60 ~~-~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 60 QQ-AVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp HH-HHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCC
T ss_pred HH-HHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCe
Confidence 21 1233444455677776644432211000013455666676765
No 224
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.72 E-value=0.51 Score=43.03 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=28.2
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
|+|||+|+ |.+|..+++.|.+.|++|+++..+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 36999997 889999999999999999999643
No 225
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=87.71 E-value=0.44 Score=46.35 Aligned_cols=35 Identities=11% Similarity=0.040 Sum_probs=30.8
Q ss_pred CCCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 68 TCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 68 ~~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
..|+++|+|+|+|..|...+..|.+.|++|++++.
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEec
Confidence 45678999999999999999999999999999954
No 226
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=87.69 E-value=0.46 Score=48.57 Aligned_cols=35 Identities=6% Similarity=0.078 Sum_probs=29.4
Q ss_pred CCCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 68 TCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 68 ~~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
..|+++|+|+|+|..|..++..|.+.|++|.+++.
T Consensus 19 ~~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~ 53 (430)
T 3ihm_A 19 SHMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTD 53 (430)
T ss_dssp ----CEEEEECCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CcCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcC
Confidence 34678999999999999999999999999999964
No 227
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=87.67 E-value=0.89 Score=43.20 Aligned_cols=76 Identities=11% Similarity=0.023 Sum_probs=46.6
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-ccc-----cCeeEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKL-----ADESVCIGEAPSSQSYLLIPNVLSAAISR 142 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~~-----ad~~~~~~~~~~~~~~~~~~~l~~~~~~~ 142 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.+....... ..+ .-..+.+ |..+.+.+.+++++.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~ 99 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL-------NVNDATAVDALVEST 99 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEEC-------CTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEE-------eCCCHHHHHHHHHHH
Confidence 3578899886 6789999999999999999885432211100 000 0122333 355666655555432
Q ss_pred -----CCCEEEeCCC
Q 009903 143 -----GCTMLHPGYG 152 (523)
Q Consensus 143 -----~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 100 ~~~~g~iD~lvnnAg 114 (270)
T 3ftp_A 100 LKEFGALNVLVNNAG 114 (270)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 7999886644
No 228
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=87.61 E-value=1.5 Score=41.12 Aligned_cols=64 Identities=13% Similarity=0.231 Sum_probs=46.9
Q ss_pred EEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009903 73 KILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (523)
Q Consensus 73 ~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~~ 151 (523)
+|||+|+ |.+|..+++.+.+ |++|++++.+.... .. +.. +..+.+.+.++.+..++|.|+-..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-------~~-~~~-------Dl~~~~~~~~~~~~~~~d~vi~~a 65 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-------GG-YKL-------DLTDFPRLEDFIIKKRPDVIINAA 65 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-------TC-EEC-------CTTSHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-------CC-cee-------ccCCHHHHHHHHHhcCCCEEEECC
Confidence 6999995 8899999999985 99999986443211 11 333 366778888887776899998654
Q ss_pred C
Q 009903 152 G 152 (523)
Q Consensus 152 g 152 (523)
+
T Consensus 66 ~ 66 (273)
T 2ggs_A 66 A 66 (273)
T ss_dssp C
T ss_pred c
Confidence 4
No 229
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=87.58 E-value=1.1 Score=41.89 Aligned_cols=78 Identities=14% Similarity=0.024 Sum_probs=47.1
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccc-cc---cCeeEEcCCCCCCCCCCCHHHHHHHHHH---
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL---ADESVCIGEAPSSQSYLLIPNVLSAAIS--- 141 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-~~---ad~~~~~~~~~~~~~~~~~~~l~~~~~~--- 141 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.+.+...... .+ ......+. .|..+.+.+.++++.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARS-----LDARNEDEVTAFLNAADA 80 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEE-----CCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEE-----CcCCCHHHHHHHHHHHHh
Confidence 3578999996 57899999999999999999864433211110 01 11122111 135556665555443
Q ss_pred -cCCCEEEeCCC
Q 009903 142 -RGCTMLHPGYG 152 (523)
Q Consensus 142 -~~id~Vi~~~g 152 (523)
.++|.++-.-|
T Consensus 81 ~g~id~lv~nAg 92 (252)
T 3h7a_A 81 HAPLEVTIFNVG 92 (252)
T ss_dssp HSCEEEEEECCC
T ss_pred hCCceEEEECCC
Confidence 37898886544
No 230
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=87.54 E-value=1.8 Score=47.24 Aligned_cols=76 Identities=13% Similarity=0.046 Sum_probs=50.4
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-ccc----cC--eeEEcCCCCCCCCCCCHHHHHHHHHH
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKL----AD--ESVCIGEAPSSQSYLLIPNVLSAAIS 141 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~~----ad--~~~~~~~~~~~~~~~~~~~l~~~~~~ 141 (523)
++|+|||+|+ |.+|..+++.+.+.|++|++++......... ..+ .. ..+.. +..+.+.+.++++.
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~-------Dl~d~~~l~~~~~~ 82 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEV-------DLCDRKGLEKVFKE 82 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEEC-------CTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEc-------CCCCHHHHHHHHHh
Confidence 4579999995 8899999999999999999986432211100 000 01 12222 36677788888776
Q ss_pred cCCCEEEeCCC
Q 009903 142 RGCTMLHPGYG 152 (523)
Q Consensus 142 ~~id~Vi~~~g 152 (523)
.++|.|+-..+
T Consensus 83 ~~~D~Vih~A~ 93 (699)
T 1z45_A 83 YKIDSVIHFAG 93 (699)
T ss_dssp SCCCEEEECCS
T ss_pred CCCCEEEECCc
Confidence 68999886543
No 231
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=87.51 E-value=0.8 Score=42.47 Aligned_cols=33 Identities=12% Similarity=0.055 Sum_probs=28.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
+|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 478999996 678999999999999999998543
No 232
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=87.51 E-value=0.6 Score=46.75 Aligned_cols=32 Identities=9% Similarity=0.030 Sum_probs=29.2
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 72 k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
+||+|+|+|..|..++..|++.|++|.++...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecC
Confidence 58999999999999999999999999999543
No 233
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=87.48 E-value=0.55 Score=43.94 Aligned_cols=69 Identities=13% Similarity=0.039 Sum_probs=46.2
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc--CCCEE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR--GCTML 147 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~--~id~V 147 (523)
||++||+|+ |.+|..+++.+.+.|++|++++.+..... . + + ..+..+.+.+.+++++. ++|.+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--~---~--~-------~~Dl~~~~~v~~~~~~~~~~id~l 66 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI--A---D--L-------STAEGRKQAIADVLAKCSKGMDGL 66 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE--C---C--T-------TSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc--c---c--c-------ccCCCCHHHHHHHHHHhCCCCCEE
Confidence 468999996 67899999999999999998854332111 0 0 1 11244556666666654 67998
Q ss_pred EeCCCc
Q 009903 148 HPGYGF 153 (523)
Q Consensus 148 i~~~g~ 153 (523)
+-.-+.
T Consensus 67 v~~Ag~ 72 (257)
T 1fjh_A 67 VLCAGL 72 (257)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 866543
No 234
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=87.46 E-value=0.73 Score=43.65 Aligned_cols=33 Identities=30% Similarity=0.343 Sum_probs=28.5
Q ss_pred ccEEEEEcC---cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR---GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~---g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~ 42 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFD 42 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence 478999995 679999999999999999988543
No 235
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=87.43 E-value=0.81 Score=42.80 Aligned_cols=33 Identities=12% Similarity=0.176 Sum_probs=28.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|+|||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999986 678999999999999999998543
No 236
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=87.29 E-value=1 Score=42.39 Aligned_cols=36 Identities=6% Similarity=0.153 Sum_probs=29.8
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcC---CcEEEEecCCC
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMG---IPCVAVYSTID 105 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G---~~vi~v~~~~~ 105 (523)
.+|++||+|+ |.+|..+++.+.+.| ++|++++.+..
T Consensus 20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~ 59 (267)
T 1sny_A 20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNRE 59 (267)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTT
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChh
Confidence 3578999986 678999999999999 99999865433
No 237
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=87.15 E-value=2.5 Score=41.81 Aligned_cols=73 Identities=15% Similarity=0.123 Sum_probs=46.7
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccC--eeEEcCCCCCCCC-CCCHHHHHHHHHHcCCCE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD--ESVCIGEAPSSQS-YLLIPNVLSAAISRGCTM 146 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad--~~~~~~~~~~~~~-~~~~~~l~~~~~~~~id~ 146 (523)
.|+|||+|+ |.+|..+++.+.+.|++|+++..+.+... ...+.+ ....+. .| ..+.+.+.++.+ ++|.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~l~~~~~v~~v~-----~D~l~d~~~l~~~~~--~~d~ 76 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI-AEELQAIPNVTLFQ-----GPLLNNVPLMDTLFE--GAHL 76 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH-HHHHHTSTTEEEEE-----SCCTTCHHHHHHHHT--TCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh-HHHHhhcCCcEEEE-----CCccCCHHHHHHHHh--cCCE
Confidence 468999996 88999999999999999999864433210 011111 111111 24 556777777664 5898
Q ss_pred EEeCC
Q 009903 147 LHPGY 151 (523)
Q Consensus 147 Vi~~~ 151 (523)
|+...
T Consensus 77 Vi~~a 81 (352)
T 1xgk_A 77 AFINT 81 (352)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 88543
No 238
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=87.14 E-value=4.5 Score=38.25 Aligned_cols=33 Identities=12% Similarity=0.016 Sum_probs=28.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 578999996 678999999999999999998643
No 239
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=87.10 E-value=0.6 Score=45.43 Aligned_cols=34 Identities=9% Similarity=0.055 Sum_probs=30.0
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
|++.|+|+|+|..|..++..|.+.|++|++++..
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~ 34 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCceEEEECCcHHHHHHHHHHHHCCCcEEEEECC
Confidence 4568999999999999999999999999999543
No 240
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=87.09 E-value=1.5 Score=42.24 Aligned_cols=78 Identities=10% Similarity=0.042 Sum_probs=47.6
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccc-ccc----CeeEEcCCCCCCCCCCCHHHHHHHHHHc-
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLA----DESVCIGEAPSSQSYLLIPNVLSAAISR- 142 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-~~a----d~~~~~~~~~~~~~~~~~~~l~~~~~~~- 142 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.+.+...... .+. .....+. .|..+.+.+.+++++.
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-----~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVR-----LDVSDPGSCADAARTVV 114 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEE-----CCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEE-----EeCCCHHHHHHHHHHHH
Confidence 3578999986 67899999999999999999864432211100 110 1222111 1355666665554433
Q ss_pred ----CCCEEEeCCC
Q 009903 143 ----GCTMLHPGYG 152 (523)
Q Consensus 143 ----~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 115 ~~~g~iD~lvnnAg 128 (293)
T 3rih_A 115 DAFGALDVVCANAG 128 (293)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 7899886544
No 241
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=87.07 E-value=0.55 Score=50.13 Aligned_cols=38 Identities=13% Similarity=-0.021 Sum_probs=31.6
Q ss_pred cCCCccEEEEEcCcHHHHHHHHHHHHc--CCcEEEEecCC
Q 009903 67 VTCRQEKILVANRGEIAVRVIRTAHEM--GIPCVAVYSTI 104 (523)
Q Consensus 67 ~~~~~k~ILi~g~g~~~~~vi~aa~~~--G~~vi~v~~~~ 104 (523)
+..++++|+|+|+|..|...+..|++. |++|++++...
T Consensus 32 ~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 71 (588)
T 3ics_A 32 DRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE 71 (588)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 344578999999999999999999999 89999996443
No 242
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=87.01 E-value=1.6 Score=40.55 Aligned_cols=75 Identities=12% Similarity=0.071 Sum_probs=47.1
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccC---eeEEcCCCCCCCCCCCHHHHHHHHHH----
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLAD---ESVCIGEAPSSQSYLLIPNVLSAAIS---- 141 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad---~~~~~~~~~~~~~~~~~~~l~~~~~~---- 141 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.+.... ...+.. ..+.. |..+.+.+.++++.
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~ 83 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVA-------DVTDAEAMTAAAAEAEAV 83 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEEC-------CTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEE-------ecCCHHHHHHHHHHHHhh
Confidence 478999986 678999999999999999998543221110 001111 22332 35566666655543
Q ss_pred cCCCEEEeCCC
Q 009903 142 RGCTMLHPGYG 152 (523)
Q Consensus 142 ~~id~Vi~~~g 152 (523)
.++|.|+-..+
T Consensus 84 ~~id~li~~Ag 94 (254)
T 2wsb_A 84 APVSILVNSAG 94 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCcEEEECCc
Confidence 47999886544
No 243
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=87.01 E-value=2.1 Score=41.74 Aligned_cols=74 Identities=4% Similarity=-0.082 Sum_probs=44.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcC-------CcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMG-------IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G-------~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~ 142 (523)
.|+|||+|+ |.+|..+++.+.+.| ++|++++........ ........+. .+..+.+.+.++++ .
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--~~~~~~~~~~-----~Dl~d~~~~~~~~~-~ 85 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--GFSGAVDARA-----ADLSAPGEAEKLVE-A 85 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--TCCSEEEEEE-----CCTTSTTHHHHHHH-T
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--ccCCceeEEE-----cCCCCHHHHHHHHh-c
Confidence 468999995 889999999999999 788888643321111 0111111111 12344445555543 4
Q ss_pred CCCEEEeCCC
Q 009903 143 GCTMLHPGYG 152 (523)
Q Consensus 143 ~id~Vi~~~g 152 (523)
++|.|+-..+
T Consensus 86 ~~d~vih~A~ 95 (342)
T 2hrz_A 86 RPDVIFHLAA 95 (342)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 7999885543
No 244
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=87.01 E-value=1.3 Score=41.63 Aligned_cols=75 Identities=16% Similarity=0.129 Sum_probs=46.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-ccccc-C-eeEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLA-D-ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~a-d-~~~~~~~~~~~~~~~~~~~l~~~~~~~---- 142 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+...... ...+. . ..+.+ |..+.+.+.+++++.
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~d~~~v~~~~~~~~~~~ 84 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEV-------DVTKRASVDAAMQKAIDAL 84 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEE-------eCCCHHHHHHHHHHHHHHc
Confidence 478999986 678999999999999999988543221100 00111 1 12222 355666665555432
Q ss_pred -CCCEEEeCCC
Q 009903 143 -GCTMLHPGYG 152 (523)
Q Consensus 143 -~id~Vi~~~g 152 (523)
++|.|+-.-+
T Consensus 85 g~iD~lv~~Ag 95 (263)
T 3ak4_A 85 GGFDLLCANAG 95 (263)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7999886544
No 245
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=87.00 E-value=3.5 Score=40.74 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=29.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTID 105 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~ 105 (523)
.|++||+|+ +.+|..+++.+.+.|++|+++..+.+
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~ 80 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQ 80 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCS
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChh
Confidence 578999986 67899999999999999999865443
No 246
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=86.96 E-value=1.1 Score=42.91 Aligned_cols=75 Identities=15% Similarity=0.118 Sum_probs=46.4
Q ss_pred ccEEEEEcC---cHHHHHHHHHHHHcCCcEEEEecCCCCCCcccccc-----CeeEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009903 71 QEKILVANR---GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLA-----DESVCIGEAPSSQSYLLIPNVLSAAISR 142 (523)
Q Consensus 71 ~k~ILi~g~---g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~a-----d~~~~~~~~~~~~~~~~~~~l~~~~~~~ 142 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.........+. -..+.+ |..+.+.+.+++++.
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~-------Dl~~~~~v~~~~~~~ 93 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKC-------DVSLDEDIKNLKKFL 93 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEEC-------CTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEc-------CCCCHHHHHHHHHHH
Confidence 478999997 47999999999999999998864331000001110 122333 355666665555432
Q ss_pred -----CCCEEEeCCC
Q 009903 143 -----GCTMLHPGYG 152 (523)
Q Consensus 143 -----~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 94 ~~~~g~iD~lv~~Ag 108 (285)
T 2p91_A 94 EENWGSLDIIVHSIA 108 (285)
T ss_dssp HHHTSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 6898886544
No 247
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=86.93 E-value=1.2 Score=42.04 Aligned_cols=33 Identities=24% Similarity=0.214 Sum_probs=28.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~ 39 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDRE 39 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999986 678999999999999999998543
No 248
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=86.93 E-value=0.89 Score=45.47 Aligned_cols=114 Identities=8% Similarity=0.029 Sum_probs=71.7
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCee--EEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADES--VCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~--~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
.++|+|+|.|..|..+++.+.+. +++.+.+.+.+. ...+++.. ..++ ..+.+.+.++++ ++|+|+
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~---a~~la~~~~~~~~d-------~~~~~~l~~ll~--~~DvVI 82 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNEN---LEKVKEFATPLKVD-------ASNFDKLVEVMK--EFELVI 82 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHH---HHHHTTTSEEEECC-------TTCHHHHHHHHT--TCSCEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHH---HHHHHhhCCeEEEe-------cCCHHHHHHHHh--CCCEEE
Confidence 67999999999999999999988 888777533221 12222221 2222 446677777765 589998
Q ss_pred eCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCC
Q 009903 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~ 202 (523)
.+.... ....++..+.+.|..++-.+.. ..+-..+.+.++++|+.....
T Consensus 83 n~~P~~-~~~~v~~a~l~~G~~~vD~s~~----~~~~~~l~~~Ak~aG~~~l~g 131 (365)
T 2z2v_A 83 GALPGF-LGFKSIKAAIKSKVDMVDVSFM----PENPLELRDEAEKAQVTIVFD 131 (365)
T ss_dssp ECCCHH-HHHHHHHHHHHTTCCEEECCCC----SSCGGGGHHHHHHTTCEEECS
T ss_pred ECCChh-hhHHHHHHHHHhCCeEEEccCC----cHHHHHHHHHHHHcCCEEEEC
Confidence 764321 2245667777888877643321 111134566788889876544
No 249
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=86.92 E-value=1.1 Score=41.41 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=45.8
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHH-H-cCCCE
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAI-S-RGCTM 146 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~-~-~~id~ 146 (523)
|.|++||+|+ |.+|..+++.+.+.|++|++++.+.+. ....+.-..+..| ..+ .+.+.+++.+. . .++|.
T Consensus 1 ~~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~D----~~~-~~~~~~~~~~~~~~g~id~ 73 (239)
T 2ekp_A 1 MERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQSLGAVPLPTD----LEK-DDPKGLVKRALEALGGLHV 73 (239)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHTCEEEECC----TTT-SCHHHHHHHHHHHHTSCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHhhCcEEEecC----Cch-HHHHHHHHHHHHHcCCCCE
Confidence 3578999996 678999999999999999998644322 1111111222222 223 44555554433 2 36999
Q ss_pred EEeCCC
Q 009903 147 LHPGYG 152 (523)
Q Consensus 147 Vi~~~g 152 (523)
++-..+
T Consensus 74 lv~~Ag 79 (239)
T 2ekp_A 74 LVHAAA 79 (239)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 886544
No 250
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=86.87 E-value=2.9 Score=39.55 Aligned_cols=34 Identities=9% Similarity=0.142 Sum_probs=29.1
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI 104 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~ 104 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 40 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSA 40 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccc
Confidence 578999996 6789999999999999999986543
No 251
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=86.87 E-value=0.86 Score=42.78 Aligned_cols=75 Identities=12% Similarity=0.053 Sum_probs=45.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHH----cCCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS----RGCT 145 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~----~~id 145 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.... .....+......+. .|..+.+.+.++++. .++|
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~-----~D~~~~~~v~~~~~~~~~~g~id 81 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE--DVVADLGDRARFAA-----ADVTDEAAVASALDLAETMGTLR 81 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH--HHHHHTCTTEEEEE-----CCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH--HHHHhcCCceEEEE-----CCCCCHHHHHHHHHHHHHhCCCC
Confidence 578999986 67899999999999999999854221 11111222222111 134555555554432 2689
Q ss_pred EEEeCCC
Q 009903 146 MLHPGYG 152 (523)
Q Consensus 146 ~Vi~~~g 152 (523)
.++-.-+
T Consensus 82 ~lv~nAg 88 (257)
T 3tl3_A 82 IVVNCAG 88 (257)
T ss_dssp EEEECGG
T ss_pred EEEECCC
Confidence 8886543
No 252
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=86.82 E-value=1.6 Score=40.99 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=27.9
Q ss_pred ccEEEEEcCc-H--HHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANRG-E--IAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~g-~--~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|++ . +|..+++.+.+.|++|++++.+
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 5789999964 3 8999999999999999988543
No 253
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=86.70 E-value=0.69 Score=43.61 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=28.4
Q ss_pred ccEEEEEcC---cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR---GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~---g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~ 43 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQA 43 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 478999997 479999999999999999988543
No 254
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.69 E-value=0.97 Score=42.66 Aligned_cols=33 Identities=12% Similarity=0.209 Sum_probs=28.4
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence 3578999996 56899999999999999998854
No 255
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=86.67 E-value=0.85 Score=42.53 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=28.3
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
|.|++||.|+ +.+|..+++.+.+.|++|++++.
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 4578999986 67899999999999999988753
No 256
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=86.64 E-value=0.77 Score=42.92 Aligned_cols=77 Identities=10% Similarity=0.056 Sum_probs=46.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-ccc---cCeeEEcCCCCCCCCCCCHHHHHHHHHHc---
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKL---ADESVCIGEAPSSQSYLLIPNVLSAAISR--- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~~---ad~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 142 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+..... ..+ ......+. .|..+.+.+.+++++.
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVA-----VDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE-----CCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEE-----ccCCCHHHHHHHHHHHHHH
Confidence 578999996 6789999999999999999985432211100 000 11121111 1355566655555432
Q ss_pred --CCCEEEeCCC
Q 009903 143 --GCTMLHPGYG 152 (523)
Q Consensus 143 --~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 84 ~g~id~li~~Ag 95 (253)
T 3qiv_A 84 FGGIDYLVNNAA 95 (253)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 7999986654
No 257
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=86.62 E-value=1.1 Score=42.59 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=29.1
Q ss_pred ccEEEEEcC---cHHHHHHHHHHHHcCCcEEEEecCC
Q 009903 71 QEKILVANR---GEIAVRVIRTAHEMGIPCVAVYSTI 104 (523)
Q Consensus 71 ~k~ILi~g~---g~~~~~vi~aa~~~G~~vi~v~~~~ 104 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 478999997 5799999999999999999986443
No 258
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=86.50 E-value=0.85 Score=45.38 Aligned_cols=142 Identities=13% Similarity=0.111 Sum_probs=80.2
Q ss_pred CccEEEEEcCcHHHHHHHHHHH-H-cCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 70 RQEKILVANRGEIAVRVIRTAH-E-MGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~-~-~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
|+.+|.|+|.|.+|...++++. + .|++++.+. +.+... ...+++++- + ....+.+.+++++ +..+|+|
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~-d~~~~~-~~~~a~~~g-~----~~~~~~~~~~ll~---~~~~D~V 91 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVC-DIVAGR-AQAALDKYA-I----EAKDYNDYHDLIN---DKDVEVV 91 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEE-CSSTTH-HHHHHHHHT-C----CCEEESSHHHHHH---CTTCCEE
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEE-eCCHHH-HHHHHHHhC-C----CCeeeCCHHHHhc---CCCCCEE
Confidence 3569999999999999999998 4 378877654 333221 122222210 0 0011455555544 4569999
Q ss_pred EeCCCcccccHHHHHHHHHcCCceeC-----CCHHHHHHhCCHHHHHHHHHHCCCCC--CCCCCccCCCHHHHHHHHHh-
Q 009903 148 HPGYGFLAENAVFVEMCREHGINFIG-----PNPDSIRIMGDKSTARETMKNAGVPT--VPGSDGLLQSTEEAVKLADE- 219 (523)
Q Consensus 148 i~~~g~~~e~~~~a~~~~~~gl~~~g-----~~~~~~~~~~dK~~~r~~l~~~Gip~--p~~~~~~~~s~~e~~~~~~~- 219 (523)
+.+... ......+..+.+.|.+++. .+.+.+ ..+.+.+++.|+.. ..+..+.......+.+.++.
T Consensus 92 ~i~tp~-~~h~~~~~~al~aGk~Vl~EKPla~~~~e~------~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~~g 164 (357)
T 3ec7_A 92 IITASN-EAHADVAVAALNANKYVFCEKPLAVTAADC------QRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIIDSG 164 (357)
T ss_dssp EECSCG-GGHHHHHHHHHHTTCEEEEESSSCSSHHHH------HHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHHHHT
T ss_pred EEcCCc-HHHHHHHHHHHHCCCCEEeecCccCCHHHH------HHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHHhcC
Confidence 876532 1335666677778887653 233332 23455667788765 33321223344566666654
Q ss_pred -cCCcEEEEe
Q 009903 220 -LGFPVMIKA 228 (523)
Q Consensus 220 -~g~P~VvKP 228 (523)
+|-+..+.-
T Consensus 165 ~iG~i~~v~~ 174 (357)
T 3ec7_A 165 EIGQPLMVHG 174 (357)
T ss_dssp TTCSEEEEEE
T ss_pred CCCCeEEEEE
Confidence 677765553
No 259
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=86.49 E-value=0.61 Score=47.68 Aligned_cols=34 Identities=6% Similarity=0.089 Sum_probs=29.1
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcC--CcEEEEecC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMG--IPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G--~~vi~v~~~ 103 (523)
|.|+|+|+|+|..|...++.|++++ ++|++++.+
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~ 36 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCC
Confidence 6789999999999999999999987 789999643
No 260
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=86.45 E-value=1 Score=42.57 Aligned_cols=75 Identities=11% Similarity=0.035 Sum_probs=46.1
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-cccc---C-eeEEcCCCCCCCCCCCHHHHHHHHHH---
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLA---D-ESVCIGEAPSSQSYLLIPNVLSAAIS--- 141 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~~a---d-~~~~~~~~~~~~~~~~~~~l~~~~~~--- 141 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+....... ..+. . ..+.. |..+.+.+.+++++
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~ 88 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHC-------DVTKDEDVRNLVDTTIA 88 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEEC-------CTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEEC-------CCCCHHHHHHHHHHHHH
Confidence 478999986 6789999999999999999885332111000 0010 1 12222 35566666655543
Q ss_pred --cCCCEEEeCCC
Q 009903 142 --RGCTMLHPGYG 152 (523)
Q Consensus 142 --~~id~Vi~~~g 152 (523)
.++|.|+-..+
T Consensus 89 ~~~~id~li~~Ag 101 (278)
T 2bgk_A 89 KHGKLDIMFGNVG 101 (278)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCc
Confidence 27999885543
No 261
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=86.44 E-value=0.54 Score=45.56 Aligned_cols=34 Identities=9% Similarity=-0.011 Sum_probs=30.4
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
++++|+|+|+|..|...+..|++.|++|++++..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcC
Confidence 3578999999999999999999999999999543
No 262
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=86.42 E-value=2.5 Score=44.28 Aligned_cols=87 Identities=18% Similarity=0.040 Sum_probs=58.4
Q ss_pred CccEEEEEcCcHHHHHHHHHH-HHcCCcEEEEecCCCCCC-----ccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009903 70 RQEKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDA-----LHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa-~~~G~~vi~v~~~~~~~~-----~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 143 (523)
..|+++|.|.+.....+++.+ .++|.+++.+........ ....+.++.+ + ..|..++.+++++.+
T Consensus 302 ~Gkrv~i~gd~~~~~~l~~~L~~elGm~vv~~gt~~~~~~~~~~~~l~~~~~~v~-~--------~~D~~el~~~i~~~~ 372 (511)
T 2xdq_B 302 TGKKAVVFGDNTHAAAMTKILSREMGIHVVWAGTYCKYDADWFRAEVAGFCDEVL-I--------TDDHTVVGDAIARVE 372 (511)
T ss_dssp TTCEEEEEECHHHHHHHHHHHHHHHCCEEEEEEESCGGGHHHHHHHHTTTSSEEE-E--------CCCHHHHHHHHHHHC
T ss_pred cCCEEEEEcCChHHHHHHHHHHHhCCCEEEEeecCCCCchHHHHHHHHhcCCcEE-E--------eCCHHHHHHHHHhcC
Confidence 358999999888999999999 899999988743322111 0112334433 3 236778889999999
Q ss_pred CCEEEeCCCcccccHHHHHHHHHcCCcee
Q 009903 144 CTMLHPGYGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 144 id~Vi~~~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
+|.++.+ ..-...++++|+|++
T Consensus 373 pDl~ig~-------~~~r~~a~k~gip~~ 394 (511)
T 2xdq_B 373 PAAIFGT-------QMERHVGKRLNIPCG 394 (511)
T ss_dssp CSEEEEC-------HHHHHHHHHHTCCEE
T ss_pred CCEEEec-------cchHHHHHhcCCCeE
Confidence 9998842 222345566777754
No 263
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=86.32 E-value=1.3 Score=41.90 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=28.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999986 678999999999999999988543
No 264
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=86.32 E-value=0.82 Score=46.33 Aligned_cols=35 Identities=6% Similarity=0.036 Sum_probs=29.8
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCc--EEEEecCC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIP--CVAVYSTI 104 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~--vi~v~~~~ 104 (523)
|+++|+|+|+|..|...+..+++.|++ |++++..+
T Consensus 1 M~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~ 37 (410)
T 3ef6_A 1 MATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEP 37 (410)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSS
T ss_pred CCCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCC
Confidence 567999999999999999999999998 88886543
No 265
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=86.24 E-value=0.62 Score=45.04 Aligned_cols=30 Identities=23% Similarity=0.255 Sum_probs=24.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
||+|||+|+ |.+|..+++.+.+.| .++++.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~ 31 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVID 31 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEE
Confidence 468999996 889999999999999 555553
No 266
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=86.21 E-value=1.4 Score=40.62 Aligned_cols=34 Identities=12% Similarity=0.249 Sum_probs=28.9
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI 104 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~ 104 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~ 37 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA 37 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCc
Confidence 468999986 6789999999999999999986543
No 267
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=86.10 E-value=1.1 Score=42.94 Aligned_cols=75 Identities=15% Similarity=0.151 Sum_probs=50.1
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccC--eeEEcCCCCCCCCCCCHHHHHHHHHHc-CCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR-GCT 145 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~-~id 145 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+...... ...+.. ..+.+ |..+.+.+.+++++. ++|
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVREL-------DLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEEC-------CTTCHHHHHHHHHTCCCEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEc-------CCCCHHHHHHHHHhcCCCC
Confidence 578999986 678999999999999999998543221110 011111 22323 467788888888765 688
Q ss_pred EEEeCCC
Q 009903 146 MLHPGYG 152 (523)
Q Consensus 146 ~Vi~~~g 152 (523)
.++-.-|
T Consensus 89 ~lv~nAg 95 (291)
T 3rd5_A 89 VLINNAG 95 (291)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 8886544
No 268
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=86.08 E-value=2.5 Score=41.26 Aligned_cols=73 Identities=14% Similarity=-0.017 Sum_probs=46.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHc--CCcEEEEecCCCCC--Ccccccc-C--eeEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEM--GIPCVAVYSTIDKD--ALHVKLA-D--ESVCIGEAPSSQSYLLIPNVLSAAISR 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~--G~~vi~v~~~~~~~--~~~~~~a-d--~~~~~~~~~~~~~~~~~~~l~~~~~~~ 142 (523)
||+|||+|+ |.+|..+++.+.+. |++|++++...... .....+. . +.+.. +..+.+.+.++++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~-- 74 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVG-------DIADAELVDKLAA-- 74 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEEC-------CTTCHHHHHHHHT--
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEEC-------CCCCHHHHHHHhh--
Confidence 478999995 88999999999999 89999986432111 1111111 1 12222 3567777777765
Q ss_pred CCCEEEeCCC
Q 009903 143 GCTMLHPGYG 152 (523)
Q Consensus 143 ~id~Vi~~~g 152 (523)
++|.|+-..+
T Consensus 75 ~~d~vih~A~ 84 (348)
T 1oc2_A 75 KADAIVHYAA 84 (348)
T ss_dssp TCSEEEECCS
T ss_pred cCCEEEECCc
Confidence 4798886543
No 269
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=86.02 E-value=1.2 Score=45.51 Aligned_cols=149 Identities=15% Similarity=0.082 Sum_probs=83.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCccccccCee------E-EcCC---------CCCCCCCCCHH
Q 009903 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADES------V-CIGE---------APSSQSYLLIP 133 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~------~-~~~~---------~~~~~~~~~~~ 133 (523)
+-+|.|+|.|.+|..+++.+.+. |++++.+. +.+... ....+.+. + .++. .....-+.|.+
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~-D~~~er-a~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~e 100 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARMQGIEVGALS-ARRLPN-TFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDND 100 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSSSEEEEEEE-CSSTHH-HHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHH
T ss_pred ceEEEEECChHHHHHHHHHHhhCCCcEEEEEE-eCCHHH-HHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHH
Confidence 45899999999999988888765 77877775 333221 11111100 0 0000 00000145555
Q ss_pred HHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHH
Q 009903 134 NVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEA 213 (523)
Q Consensus 134 ~l~~~~~~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~ 213 (523)
+++ ....+|+|+...+.......++..+.+.|.+++.-+.+. ....=..+.+..+++|+..-..+-......-++
T Consensus 101 eLL---~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l--~~~eg~eL~~~A~e~Gvvl~~~~gdqp~~~~eL 175 (446)
T 3upl_A 101 LIL---SNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEA--DVTIGPYLKAQADKQGVIYSLGAGDEPSSCMEL 175 (446)
T ss_dssp HHH---TCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCHHH--HHHHHHHHHHHHHHHTCCEEECTTSHHHHHHHH
T ss_pred HHh---cCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCccc--CHHHHHHHHHHHHHhCCeeeecCCcchHHHHHH
Confidence 554 345699998665321112456677778899888534432 223445777788888876421100011224577
Q ss_pred HHHHHhcCCcEEE
Q 009903 214 VKLADELGFPVMI 226 (523)
Q Consensus 214 ~~~~~~~g~P~Vv 226 (523)
.++++..||.+|.
T Consensus 176 v~~a~~~G~~~v~ 188 (446)
T 3upl_A 176 IEFVSALGYEVVS 188 (446)
T ss_dssp HHHHHHTTCEEEE
T ss_pred HHHHHhCCCeEEE
Confidence 8888899997654
No 270
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=85.99 E-value=0.86 Score=42.45 Aligned_cols=78 Identities=14% Similarity=0.056 Sum_probs=49.6
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-CCCE
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTM 146 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-~id~ 146 (523)
..|+|||+|+ +.+|..+++.+.+.|++|++++.+.+.... ...+.+....+. .+..+.+.+.++.++. ++|.
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEV-----CNLANKEECSNLISKTSNLDI 87 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEE-----CCTTSHHHHHHHHHTCSCCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEE-----cCCCCHHHHHHHHHhcCCCCE
Confidence 4688999996 678999999999999999998643221110 011111111111 2356777777777665 6899
Q ss_pred EEeCCC
Q 009903 147 LHPGYG 152 (523)
Q Consensus 147 Vi~~~g 152 (523)
++-..+
T Consensus 88 li~~Ag 93 (249)
T 3f9i_A 88 LVCNAG 93 (249)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 886544
No 271
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=85.98 E-value=1.6 Score=44.91 Aligned_cols=115 Identities=10% Similarity=0.115 Sum_probs=66.1
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccC-----eeEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD-----ESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~id 145 (523)
+++|+|+|+|..|..+++.+.+.|++|++++.+.+. ...+++ ..+.+ +..+.+.+.++++ ++|
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~---a~~la~~~~~~~~~~~-------Dv~d~~~l~~~l~--~~D 70 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLES---AKKLSAGVQHSTPISL-------DVNDDAALDAEVA--KHD 70 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHH---HHHTTTTCTTEEEEEC-------CTTCHHHHHHHHT--TSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHH---HHHHHHhcCCceEEEe-------ecCCHHHHHHHHc--CCc
Confidence 478999999999999999999999998887543221 111211 12222 2455666666654 699
Q ss_pred EEEeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCC
Q 009903 146 MLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (523)
Q Consensus 146 ~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~ 202 (523)
+|+.+.+... ...+...+.+.|..++..+.. ......+.+.++++|+.+...
T Consensus 71 vVIn~a~~~~-~~~i~~a~l~~g~~vvd~~~~----~~~~~~l~~aA~~aGv~~i~g 122 (450)
T 1ff9_A 71 LVISLIPYTF-HATVIKSAIRQKKHVVTTSYV----SPAMMELDQAAKDAGITVMNE 122 (450)
T ss_dssp EEEECCC--C-HHHHHHHHHHHTCEEEESSCC----CHHHHHTHHHHHHTTCEEECS
T ss_pred EEEECCcccc-chHHHHHHHhCCCeEEEeecc----cHHHHHHHHHHHHCCCeEEeC
Confidence 9997764321 223344444556655532110 001224455677888865443
No 272
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=85.95 E-value=1.4 Score=43.56 Aligned_cols=89 Identities=12% Similarity=0.110 Sum_probs=53.6
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHc--CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 71 QEKILVANRGEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~--G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
+.+|.|+|.|.+|...++++.+. |++++.+. +.+... ...+++++- + ..+.+.++++ .+..+|+|+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~-d~~~~~-~~~~~~~~~-~------~~~~~~~~ll---~~~~~D~V~ 80 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVC-DIDPAA-LKAAVERTG-A------RGHASLTDML---AQTDADIVI 80 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEE-CSSHHH-HHHHHHHHC-C------EEESCHHHHH---HHCCCSEEE
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEE-cCCHHH-HHHHHHHcC-C------ceeCCHHHHh---cCCCCCEEE
Confidence 46899999999999999999987 78877554 322211 112222110 0 1145666554 346799998
Q ss_pred eCCCcccccHHHHHHHHHcCCcee
Q 009903 149 PGYGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
.+.... .....+..+.+.|.+++
T Consensus 81 i~tp~~-~h~~~~~~al~~gk~v~ 103 (354)
T 3q2i_A 81 LTTPSG-LHPTQSIECSEAGFHVM 103 (354)
T ss_dssp ECSCGG-GHHHHHHHHHHTTCEEE
T ss_pred ECCCcH-HHHHHHHHHHHCCCCEE
Confidence 765321 23455555666777665
No 273
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=85.90 E-value=5.6 Score=37.56 Aligned_cols=33 Identities=9% Similarity=0.024 Sum_probs=28.7
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 578999986 678999999999999999998644
No 274
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=85.87 E-value=0.69 Score=42.67 Aligned_cols=33 Identities=9% Similarity=0.059 Sum_probs=28.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
+|++||+|+ +.+|..+++.+.+.|++|+++..+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999996 678999999999999999888543
No 275
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=85.83 E-value=1.3 Score=43.21 Aligned_cols=34 Identities=15% Similarity=0.127 Sum_probs=29.1
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~-~vi~v~~~ 103 (523)
..+++||+|+|..+..++.++.++|. +|++++.+
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 35799999999999999999999999 67777543
No 276
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=85.81 E-value=0.98 Score=39.62 Aligned_cols=32 Identities=9% Similarity=0.138 Sum_probs=29.3
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 72 k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.+|+|+|+|..|..++..+.+.|.+|++++..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 47999999999999999999999999999643
No 277
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=85.80 E-value=1.1 Score=42.91 Aligned_cols=32 Identities=13% Similarity=0.137 Sum_probs=28.1
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
+.|++||+|+ +.+|..+++.+.+.|++|++++
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 60 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITG 60 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEe
Confidence 4578999986 6789999999999999999885
No 278
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=85.73 E-value=1.8 Score=40.96 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=28.2
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 67 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNS 67 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999986 678999999999999999998644
No 279
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=85.71 E-value=1.4 Score=41.73 Aligned_cols=32 Identities=13% Similarity=-0.024 Sum_probs=28.2
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r 63 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI 63 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEc
Confidence 578999986 67899999999999999998854
No 280
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=85.70 E-value=1.6 Score=43.02 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=27.5
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
.++|+|+|.|..|..+++.+...|+.-+.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~Itlv 64 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFV 64 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEe
Confidence 5799999999999999999999999866553
No 281
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=85.68 E-value=4.5 Score=39.46 Aligned_cols=101 Identities=11% Similarity=-0.035 Sum_probs=51.9
Q ss_pred CccEEEEEcCcHH-----HHHHHHHHHHcCCcEEEEecCCCCCCcccc-ccCeeEEcCCCCCCCC------------CCC
Q 009903 70 RQEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYSTIDKDALHVK-LADESVCIGEAPSSQS------------YLL 131 (523)
Q Consensus 70 ~~k~ILi~g~g~~-----~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~-~ad~~~~~~~~~~~~~------------~~~ 131 (523)
|.+||+++..+.. ...+++++.+.|++|.++............ ..-..+.+........ ...
T Consensus 5 m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (364)
T 1f0k_A 5 QGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNA 84 (364)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHH
T ss_pred CCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCcCccHHHHHHHHHHHHH
Confidence 3368988865432 247889999999999998654321110011 1112223321110000 001
Q ss_pred HHHHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHcCCcee
Q 009903 132 IPNVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 132 ~~~l~~~~~~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
...+.+++++.++|.|+....+ ........+...|+|++
T Consensus 85 ~~~l~~~l~~~~pDvv~~~~~~--~~~~~~~~~~~~~~p~v 123 (364)
T 1f0k_A 85 WRQARAIMKAYKPDVVLGMGGY--VSGPGGLAAWSLGIPVV 123 (364)
T ss_dssp HHHHHHHHHHHCCSEEEECSST--THHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhcCCCEEEEeCCc--CchHHHHHHHHcCCCEE
Confidence 2345667788899999975422 11222334456677765
No 282
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.68 E-value=0.93 Score=41.00 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=28.2
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
|+|||+|+ |.+|..+++.+.+.|++|+++..+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 47999995 889999999999999999999644
No 283
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=85.67 E-value=1.2 Score=44.15 Aligned_cols=78 Identities=13% Similarity=0.081 Sum_probs=50.1
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccc-cCeeEEcCCCCCCCCCCCHHHHHHHHH---HcCCC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAI---SRGCT 145 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~---~~~id 145 (523)
...+|||.|+|..|..+++.|+.+|.+|++++.+.+......++ +|..+... +.....+.+.+... ..++|
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~-----~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVD-----PAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECC-----TTTSCHHHHHHHHHHHSSSCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCc-----ccccHHHHHHHHhccccCCCCC
Confidence 35789999999999999999999999987775433222222222 34444321 01234556666554 35799
Q ss_pred EEEeCCC
Q 009903 146 MLHPGYG 152 (523)
Q Consensus 146 ~Vi~~~g 152 (523)
.|+-+.+
T Consensus 243 ~vid~~g 249 (352)
T 1e3j_A 243 VTIDCSG 249 (352)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9997654
No 284
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=85.54 E-value=1 Score=42.62 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=28.8
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
+.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 3578999986 678999999999999999988543
No 285
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=85.52 E-value=0.96 Score=43.35 Aligned_cols=31 Identities=19% Similarity=0.232 Sum_probs=28.1
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
|||||+|+ |-+|..+++.|.+.|++|+++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 57999997 88999999999999999999854
No 286
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=85.49 E-value=0.39 Score=47.32 Aligned_cols=112 Identities=12% Similarity=0.097 Sum_probs=63.0
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
.++|+|+|.|..|..+++.+.+.|+ +++++.+++... ... .+..+..+ +..+.+.+.+. .-.+.|.|+..
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-~~~~~i~g------d~~~~~~L~~a-~i~~a~~vi~~ 184 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLR-SGANFVHG------DPTRVSDLEKA-NVRGARAVIVD 184 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-TTCEEEES------CTTSHHHHHHT-CSTTEEEEEEC
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-CCcEEEEe------CCCCHHHHHhc-ChhhccEEEEc
Confidence 4689999999999999999999999 999854443222 111 12223232 34555555443 22457788876
Q ss_pred CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCC
Q 009903 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (523)
Q Consensus 151 ~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip 198 (523)
.+....+......+++++. +...+..+.|.... +.+++.|+.
T Consensus 185 ~~~d~~n~~~~~~ar~~~~-----~~~iiar~~~~~~~-~~l~~~G~d 226 (336)
T 1lnq_A 185 LESDSETIHCILGIRKIDE-----SVRIIAEAERYENI-EQLRMAGAD 226 (336)
T ss_dssp CSSHHHHHHHHHHHHTTCT-----TSEEEEECSSGGGH-HHHHHTTCS
T ss_pred CCccHHHHHHHHHHHHHCC-----CCeEEEEECCHHHH-HHHHHcCCC
Confidence 5432223334444555532 22223333444333 455677755
No 287
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=85.46 E-value=2.6 Score=41.06 Aligned_cols=36 Identities=14% Similarity=-0.031 Sum_probs=31.8
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcC-CcEEEEecCC
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMG-IPCVAVYSTI 104 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G-~~vi~v~~~~ 104 (523)
.|+++|.|+|.|.+|..++..+.+.| ++|++++.+.
T Consensus 22 ~M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 22 SMMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp TSCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred ccCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 36789999999999999999999999 9999886543
No 288
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=85.46 E-value=0.61 Score=48.43 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=30.1
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
||+|+|||+|..|+..+..|.+.|++|.++...
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~ 33 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQR 33 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccC
Confidence 688999999999999999999999999999543
No 289
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=85.45 E-value=1.7 Score=40.64 Aligned_cols=76 Identities=12% Similarity=0.057 Sum_probs=46.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccc---cCeeEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL---ADESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~---ad~~~~~~~~~~~~~~~~~~~l~~~~~~~---- 142 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.+ ......+ ......+. .|..+.+.+.+++++.
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~-----~D~~~~~~v~~~~~~~~~~~ 77 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEIARHGVKAVHHP-----ADLSDVAQIEALFALAEREF 77 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTTSCCEEEEC-----CCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhcCCceEEEe-----CCCCCHHHHHHHHHHHHHHc
Confidence 478999986 67899999999999999998854332 1101111 11122221 2345555555554432
Q ss_pred -CCCEEEeCCC
Q 009903 143 -GCTMLHPGYG 152 (523)
Q Consensus 143 -~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 78 g~id~lv~~Ag 88 (255)
T 2q2v_A 78 GGVDILVNNAG 88 (255)
T ss_dssp SSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7999886543
No 290
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=85.45 E-value=2 Score=40.18 Aligned_cols=33 Identities=18% Similarity=0.050 Sum_probs=28.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999986 678999999999999999998543
No 291
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=85.45 E-value=2.6 Score=41.86 Aligned_cols=143 Identities=10% Similarity=0.034 Sum_probs=76.9
Q ss_pred ccEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 71 QEKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~-vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
+.+|.|+|.|.+|.. .++.+++. |++++.+. +.+.......+... .-+.+.+++++ +..+|+|+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~-d~~~~~~~~~~~~~----------~~~~~~~~ll~---~~~~D~V~ 72 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVA-SRDEEKVKRDLPDV----------TVIASPEAAVQ---HPDVDLVV 72 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEE-CSCHHHHHHHCTTS----------EEESCHHHHHT---CTTCSEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEE-cCCHHHHHhhCCCC----------cEECCHHHHhc---CCCCCEEE
Confidence 468999999999986 77788776 78887664 33322111111111 12456666553 45799998
Q ss_pred eCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCC-ccCCCHHHHHHHHH--hcCCcEE
Q 009903 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLAD--ELGFPVM 225 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~-~~~~s~~e~~~~~~--~~g~P~V 225 (523)
.+... .....++..+.+.|.+++.-.|-+. ...+=..+.+.+++.|+..--.+. +.......+.+.++ .+|-+..
T Consensus 73 i~tp~-~~H~~~~~~al~aGk~Vl~EKPla~-~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~ 150 (364)
T 3e82_A 73 IASPN-ATHAPLARLALNAGKHVVVDKPFTL-DMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQGTLGAVKH 150 (364)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEECSCSCS-SHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHTTTCSEEE
T ss_pred EeCCh-HHHHHHHHHHHHCCCcEEEeCCCcC-CHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHHcCCCcceEE
Confidence 77532 1235666667778887763222111 111112455566777776422211 11122345555554 4566665
Q ss_pred EEeC
Q 009903 226 IKAT 229 (523)
Q Consensus 226 vKP~ 229 (523)
+.-.
T Consensus 151 ~~~~ 154 (364)
T 3e82_A 151 FESH 154 (364)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 292
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=85.44 E-value=0.54 Score=45.36 Aligned_cols=32 Identities=25% Similarity=0.352 Sum_probs=28.3
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
|+|||+|+ |.+|..+++.+.+.|++|++++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999997 889999999999999999998543
No 293
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=85.36 E-value=1.5 Score=40.99 Aligned_cols=77 Identities=12% Similarity=0.066 Sum_probs=45.9
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccCeeEEcCCCCCCCCCCCHHHHHHHHHH-----cC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RG 143 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~ 143 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.+.... ...+......+. .|..+.+.+.+++++ .+
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~~~~~g~ 79 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQH-----LDVTIEEDWQRVVAYAREEFGS 79 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEE-----CCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEE-----ecCCCHHHHHHHHHHHHHHcCC
Confidence 478999996 678999999999999999988543221100 001111121111 134555555555442 27
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.++-.-+
T Consensus 80 iD~lv~nAg 88 (254)
T 1hdc_A 80 VDGLVNNAG 88 (254)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999886544
No 294
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.35 E-value=0.92 Score=46.92 Aligned_cols=117 Identities=7% Similarity=0.058 Sum_probs=67.3
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccc-cccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
...++|+|+|+|..|..+++.+. .++.+.++..+.+...... .+-+..+..+ +..|.+-+.+ +.-...|++
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~-~~~~v~iIE~d~~r~~~la~~l~~~~Vi~G------D~td~~~L~e-e~i~~~D~~ 304 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLE-QTYSVKLIERNLQRAEKLSEELENTIVFCG------DAADQELLTE-ENIDQVDVF 304 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHCTTSEEEES------CTTCHHHHHH-TTGGGCSEE
T ss_pred ccccEEEEEcchHHHHHHHHHhh-hcCceEEEecCHHHHHHHHHHCCCceEEec------cccchhhHhh-cCchhhcEE
Confidence 34689999999999999999985 4689999965443221111 2222233222 4555544443 223457888
Q ss_pred EeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCC
Q 009903 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTV 200 (523)
Q Consensus 148 i~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p 200 (523)
+..++..-.+.....+++++|.+-. +....| ....+++++.|+.+.
T Consensus 305 ia~T~~De~Ni~~~llAk~~gv~kv------Ia~vn~-~~~~~l~~~~gid~v 350 (461)
T 4g65_A 305 IALTNEDETNIMSAMLAKRMGAKKV------MVLIQR-GAYVDLVQGGVIDVA 350 (461)
T ss_dssp EECCSCHHHHHHHHHHHHHTTCSEE------EEECSC-HHHHHHHCSSSSCEE
T ss_pred EEcccCcHHHHHHHHHHHHcCCccc------cccccc-cchhhhhhcccccee
Confidence 8876543233444555667776422 222333 333445667777643
No 295
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=85.33 E-value=0.86 Score=42.01 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=29.6
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
+.|+|||+|+ |.+|..+++.+.+.|++|+++..+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECC
Confidence 4678999997 889999999999999999999644
No 296
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=85.31 E-value=1.1 Score=43.16 Aligned_cols=76 Identities=14% Similarity=0.065 Sum_probs=46.2
Q ss_pred ccEEEEEcCc-H--HHHHHHHHHHHcCCcEEEEecCCCCCCccccc----cC-eeEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009903 71 QEKILVANRG-E--IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL----AD-ESVCIGEAPSSQSYLLIPNVLSAAISR 142 (523)
Q Consensus 71 ~k~ILi~g~g-~--~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~----ad-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 142 (523)
.|++||+|++ . +|..+++.+.+.|++|++++.+.........+ .. ..+.+ |..+.+.+.+++++.
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~ 103 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHC-------DVADAASIDAVFETL 103 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEEC-------CTTCHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEEC-------CCCCHHHHHHHHHHH
Confidence 5789999963 3 89999999999999998885432100000111 11 12222 355666655554432
Q ss_pred -----CCCEEEeCCCc
Q 009903 143 -----GCTMLHPGYGF 153 (523)
Q Consensus 143 -----~id~Vi~~~g~ 153 (523)
++|.++-.-+.
T Consensus 104 ~~~~g~iD~lVnnAG~ 119 (293)
T 3grk_A 104 EKKWGKLDFLVHAIGF 119 (293)
T ss_dssp HHHTSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCcc
Confidence 79998866543
No 297
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=85.29 E-value=1.2 Score=42.44 Aligned_cols=77 Identities=12% Similarity=0.132 Sum_probs=46.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-----C
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----G 143 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~ 143 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+.... ...+......+. .|..+.+.+.+++++. +
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dv~d~~~v~~~~~~~~~~~g~ 102 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVP-----TDVTDPDSVRALFTATVEKFGR 102 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEE-----CCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEE-----ecCCCHHHHHHHHHHHHHHcCC
Confidence 578899886 678999999999999999988543221100 011111222111 1355666666555433 7
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.++-.-|
T Consensus 103 iD~lVnnAg 111 (272)
T 4dyv_A 103 VDVLFNNAG 111 (272)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999986644
No 298
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=85.29 E-value=1.3 Score=43.72 Aligned_cols=146 Identities=15% Similarity=0.078 Sum_probs=79.8
Q ss_pred CccEEEEEcCcHHHHHHHHHHH-H-cCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 70 RQEKILVANRGEIAVRVIRTAH-E-MGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~-~-~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
|+.+|.|+|.|.+|...++.+. + .|++++.+. +.+.. ....+++++- + ....+.+.+++++ +..+|+|
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~-d~~~~-~~~~~~~~~g-~----~~~~~~~~~~ll~---~~~~D~V 70 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVT-DVNQE-AAQKVVEQYQ-L----NATVYPNDDSLLA---DENVDAV 70 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEE-CSSHH-HHHHHHHHTT-C----CCEEESSHHHHHH---CTTCCEE
T ss_pred CeEEEEEECccHHHHHHHHHHHhhCCCcEEEEEE-cCCHH-HHHHHHHHhC-C----CCeeeCCHHHHhc---CCCCCEE
Confidence 5679999999999999999998 5 478877664 32221 1112222110 0 0011455555544 4569999
Q ss_pred EeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCC--CCCCCccCCCHHHHHHHHHh--cCCc
Q 009903 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT--VPGSDGLLQSTEEAVKLADE--LGFP 223 (523)
Q Consensus 148 i~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~--p~~~~~~~~s~~e~~~~~~~--~g~P 223 (523)
+.+... ......+..+.+.|.+++.-.+-+. ...+=..+.+..++.|+.. ..+..+.......+.+.+++ +|-+
T Consensus 71 ~i~tp~-~~h~~~~~~al~~Gk~vl~EKP~a~-~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 148 (344)
T 3mz0_A 71 LVTSWG-PAHESSVLKAIKAQKYVFCEKPLAT-TAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDNHVIGEP 148 (344)
T ss_dssp EECSCG-GGHHHHHHHHHHTTCEEEECSCSCS-SHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHHHTTTTSSE
T ss_pred EECCCc-hhHHHHHHHHHHCCCcEEEcCCCCC-CHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHHHcCCCCCc
Confidence 876532 1235666667778877653222111 1111224555677788765 33321223344566666653 6766
Q ss_pred EEEE
Q 009903 224 VMIK 227 (523)
Q Consensus 224 ~VvK 227 (523)
..+.
T Consensus 149 ~~v~ 152 (344)
T 3mz0_A 149 LMIH 152 (344)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 299
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=85.25 E-value=1.8 Score=40.61 Aligned_cols=33 Identities=12% Similarity=0.135 Sum_probs=28.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 478999986 678999999999999999988543
No 300
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=85.17 E-value=0.92 Score=44.71 Aligned_cols=76 Identities=18% Similarity=0.145 Sum_probs=48.3
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~-~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
...+|||+|+|..|..+++.|+.+|. +|++++.+.+.......+++..+... +....+.+.++. ..++|.|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~------~~~~~~~~~~~~-~~g~D~vi 236 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPL------EEDLLEVVRRVT-GSGVEVLL 236 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTT------TSCHHHHHHHHH-SSCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcC------ccCHHHHHHHhc-CCCCCEEE
Confidence 45789999999999999999999999 89988543332222222344443211 111133444444 45799999
Q ss_pred eCCC
Q 009903 149 PGYG 152 (523)
Q Consensus 149 ~~~g 152 (523)
-+.+
T Consensus 237 d~~g 240 (343)
T 2dq4_A 237 EFSG 240 (343)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 7654
No 301
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=85.16 E-value=0.33 Score=48.43 Aligned_cols=78 Identities=13% Similarity=0.034 Sum_probs=49.1
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCc-EEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHH----HHcCC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIP-CVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAA----ISRGC 144 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~-vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~----~~~~i 144 (523)
...+|||.|+|..|..+++.|+.+|.+ |++++.+........++++..+.... +..+.+.+.+.+ ...++
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~-----~~~~~~~~~~~v~~~t~g~g~ 253 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKV-----ERLSAEESAKKIVESFGGIEP 253 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEEC-----CSCCHHHHHHHHHHHTSSCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccc-----cccchHHHHHHHHHHhCCCCC
Confidence 357899999999999999999999998 77775444333333444554442210 011233333333 33579
Q ss_pred CEEEeCCC
Q 009903 145 TMLHPGYG 152 (523)
Q Consensus 145 d~Vi~~~g 152 (523)
|.|+-+.+
T Consensus 254 Dvvid~~g 261 (363)
T 3m6i_A 254 AVALECTG 261 (363)
T ss_dssp SEEEECSC
T ss_pred CEEEECCC
Confidence 99997654
No 302
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=85.14 E-value=1.5 Score=41.27 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=29.0
Q ss_pred CccEEEEEcC---cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVANR---GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~---g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
..|+|||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~ 49 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVG 49 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecc
Confidence 4689999996 468999999999999999988643
No 303
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=85.13 E-value=3.2 Score=42.63 Aligned_cols=96 Identities=15% Similarity=0.096 Sum_probs=56.3
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCc-ccccc--CeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLA--DESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~a--d~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
.|+|+|+|.|.+|..+++.|+++|++|.+.+.......+ ...+. .-.+..+. . .+.++ ...+|.|
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~-------~-~~~~~----~~~~d~v 76 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGS-------H-PLELL----DEDFCYM 76 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESC-------C-CGGGG----GSCEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECC-------C-hHHhh----cCCCCEE
Confidence 589999999999999999999999999998643311111 11111 11222221 0 01111 1127888
Q ss_pred EeCCCcccccHHHHHHHHHcCCceeCCCHHHHH
Q 009903 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIR 180 (523)
Q Consensus 148 i~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~ 180 (523)
+...+....++. ...+.+.|+++++ ..+.+.
T Consensus 77 v~spgi~~~~p~-~~~a~~~gi~v~~-~~e~~~ 107 (451)
T 3lk7_A 77 IKNPGIPYNNPM-VKKALEKQIPVLT-EVELAY 107 (451)
T ss_dssp EECTTSCTTSHH-HHHHHHTTCCEEC-HHHHHH
T ss_pred EECCcCCCCChh-HHHHHHCCCcEEe-HHHHHH
Confidence 877665444443 4556777888874 444443
No 304
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=85.13 E-value=1.2 Score=41.23 Aligned_cols=77 Identities=12% Similarity=0.066 Sum_probs=46.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-cc----ccCeeEEcCCCCCCCCCCCHHHHHHHHHHc--
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VK----LADESVCIGEAPSSQSYLLIPNVLSAAISR-- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~----~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 142 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.+..... .. .......+. .|..+.+.+.+++++.
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE-----MNLLSEESINKAFEEIYN 81 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEE-----CCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEE-----ccCCCHHHHHHHHHHHHH
Confidence 478999986 6789999999999999999985432211100 00 011111111 1355666666555432
Q ss_pred ---CCCEEEeCCC
Q 009903 143 ---GCTMLHPGYG 152 (523)
Q Consensus 143 ---~id~Vi~~~g 152 (523)
++|.|+-..+
T Consensus 82 ~~~~~d~vi~~Ag 94 (248)
T 2pnf_A 82 LVDGIDILVNNAG 94 (248)
T ss_dssp HSSCCSEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 7999886544
No 305
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=85.11 E-value=0.74 Score=43.30 Aligned_cols=32 Identities=16% Similarity=0.133 Sum_probs=27.9
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHH-cCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHE-MGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~-~G~~vi~v~~ 102 (523)
+|+|||+|+ |.+|..+++.+.+ .|++|+++..
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r 37 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTAR 37 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEES
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeC
Confidence 578999986 6789999999999 9999998854
No 306
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=85.05 E-value=1.9 Score=41.65 Aligned_cols=76 Identities=13% Similarity=0.076 Sum_probs=47.0
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-ccc---c-C-eeEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKL---A-D-ESVCIGEAPSSQSYLLIPNVLSAAISR 142 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~~---a-d-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 142 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.+.+..... ..+ . + ..+.+ |..+.+.+.+++++.
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVC-------DVRHLDEMVRLADEA 102 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-------CTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEc-------cCCCHHHHHHHHHHH
Confidence 3578999996 6789999999999999999885432211100 000 0 1 12222 355666665555432
Q ss_pred -----CCCEEEeCCC
Q 009903 143 -----GCTMLHPGYG 152 (523)
Q Consensus 143 -----~id~Vi~~~g 152 (523)
++|.++-.-|
T Consensus 103 ~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHSSCSEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 7999886544
No 307
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=85.03 E-value=2 Score=40.84 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=28.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 55 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARG 55 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999986 678999999999999999988543
No 308
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=85.03 E-value=2.4 Score=39.41 Aligned_cols=77 Identities=9% Similarity=0.038 Sum_probs=46.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCC-CCCCcc-ccccCeeEEcCCCCCCCCCCCHHHHHHHHHH-----c
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI-DKDALH-VKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----R 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~-~~~~~~-~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~-----~ 142 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+. +..... .........+. .|..+.+.+.+++++ .
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----~Dv~~~~~v~~~~~~~~~~~g 81 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVK-----CDVSQPGDVEAFGKQVISTFG 81 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEE-----CCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEE-----eecCCHHHHHHHHHHHHHHcC
Confidence 478999986 6789999999999999999986443 111000 01111121111 134555555554432 3
Q ss_pred CCCEEEeCCC
Q 009903 143 GCTMLHPGYG 152 (523)
Q Consensus 143 ~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 82 ~id~lv~nAg 91 (249)
T 2ew8_A 82 RCDILVNNAG 91 (249)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999886544
No 309
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=85.02 E-value=1.5 Score=42.11 Aligned_cols=77 Identities=8% Similarity=0.035 Sum_probs=46.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-ccc----cCeeEEcCCCCCCCCCCCHHHHHHHHHHc--
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKL----ADESVCIGEAPSSQSYLLIPNVLSAAISR-- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~~----ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 142 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.+..... ..+ ......+. .|..+.+.+.++++..
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-----~Dl~~~~~~~~~~~~~~~ 100 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ-----CDVRDPDMVQNTVSELIK 100 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEE-----CCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEE-----eCCCCHHHHHHHHHHHHH
Confidence 478999986 6789999999999999999885432211000 000 11111111 1355666666655443
Q ss_pred ---CCCEEEeCCC
Q 009903 143 ---GCTMLHPGYG 152 (523)
Q Consensus 143 ---~id~Vi~~~g 152 (523)
++|.|+-..+
T Consensus 101 ~~g~id~li~~Ag 113 (302)
T 1w6u_A 101 VAGHPNIVINNAA 113 (302)
T ss_dssp HTCSCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 6898886544
No 310
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=84.95 E-value=5.2 Score=38.39 Aligned_cols=105 Identities=17% Similarity=0.085 Sum_probs=61.7
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
..+|+|+|. |..|..+++.+.+.|++++.. .++... ......... |.+.+++.+ +..+|+++.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~-V~p~~~--g~~~~G~~v----------y~sl~el~~---~~~~D~viI 70 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGG-VTPGKG--GTTHLGLPV----------FNTVREAVA---ATGATASVI 70 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEE-ECTTCT--TCEETTEEE----------ESSHHHHHH---HHCCCEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEE-eCCCcc--cceeCCeec----------cCCHHHHhh---cCCCCEEEE
Confidence 468999997 999999999999999985422 133211 011111111 445555433 347898876
Q ss_pred CCCcccccHHHHHHHHHcCCce-e-CC---CHHHHHHhCCHHHHHHHHHHCCCC
Q 009903 150 GYGFLAENAVFVEMCREHGINF-I-GP---NPDSIRIMGDKSTARETMKNAGVP 198 (523)
Q Consensus 150 ~~g~~~e~~~~a~~~~~~gl~~-~-g~---~~~~~~~~~dK~~~r~~l~~~Gip 198 (523)
.... .......+.+.+.|++. + .+ +.+ +...+.+.+++.|+.
T Consensus 71 ~tP~-~~~~~~~~ea~~~Gi~~iVi~t~G~~~~------~~~~l~~~A~~~gv~ 117 (288)
T 2nu8_A 71 YVPA-PFCKDSILEAIDAGIKLIITITEGIPTL------DMLTVKVKLDEAGVR 117 (288)
T ss_dssp CCCG-GGHHHHHHHHHHTTCSEEEECCCCCCHH------HHHHHHHHHHHHTCE
T ss_pred ecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHH------HHHHHHHHHHHcCCE
Confidence 5422 12356667777788874 2 22 221 234667777788874
No 311
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=84.94 E-value=1.1 Score=44.89 Aligned_cols=33 Identities=12% Similarity=0.256 Sum_probs=29.8
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.++|+|+|+|.+|..+++.++.+|++|++++.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 479999999999999999999999999888543
No 312
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=84.91 E-value=1.9 Score=40.02 Aligned_cols=75 Identities=11% Similarity=-0.031 Sum_probs=46.3
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCcc-ccccCeeEEcCCCCCCCCCCCHHHHHHHHHH-----cC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RG 143 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~-~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~ 143 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.+..... ..+.-..+.+ |..+.+.+.+++++ .+
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVM-------DVADPASVERGFAEALAHLGR 77 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEEC-------CTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEe-------cCCCHHHHHHHHHHHHHHcCC
Confidence 478999986 6789999999999999999985432211000 0011122333 35566665555443 26
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.++-.-+
T Consensus 78 id~lvn~Ag 86 (245)
T 1uls_A 78 LDGVVHYAG 86 (245)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999886544
No 313
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=84.89 E-value=0.95 Score=43.30 Aligned_cols=75 Identities=12% Similarity=0.012 Sum_probs=46.3
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccc----cC--eeEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKL----AD--ESVCIGEAPSSQSYLLIPNVLSAAISR 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~----ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~ 142 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+.... ...+ .. ..+.+ |..+.+.+.+++++.
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~ 105 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVC-------DVGDPDQVAALFAAV 105 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEEC-------CTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEc-------CCCCHHHHHHHHHHH
Confidence 578999986 678999999999999999998543221110 0001 01 22333 355666665555433
Q ss_pred -----CCCEEEeCCC
Q 009903 143 -----GCTMLHPGYG 152 (523)
Q Consensus 143 -----~id~Vi~~~g 152 (523)
++|.++-.-|
T Consensus 106 ~~~~g~iD~lvnnAG 120 (281)
T 4dry_A 106 RAEFARLDLLVNNAG 120 (281)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 7899886654
No 314
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=84.87 E-value=1 Score=46.85 Aligned_cols=35 Identities=17% Similarity=0.054 Sum_probs=30.5
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcC---CcEEEEecCC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMG---IPCVAVYSTI 104 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G---~~vi~v~~~~ 104 (523)
|.++|+|+|+|..|..++..|++.| ++|.+++...
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS 71 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC
Confidence 3479999999999999999999998 9999996443
No 315
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=84.87 E-value=1.8 Score=40.47 Aligned_cols=77 Identities=12% Similarity=0.084 Sum_probs=46.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-----C
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----G 143 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~ 143 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+...... ...+......+. .|..+.+.+.+++++. +
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~~~~~g~ 83 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVA-----ADISKEADVDAAVEAALSKFGK 83 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEE-----CCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEE-----ecCCCHHHHHHHHHHHHHhcCC
Confidence 578999996 568999999999999999998643221110 011111222111 1345555555554432 7
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.++-..+
T Consensus 84 id~li~~Ag 92 (261)
T 3n74_A 84 VDILVNNAG 92 (261)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCc
Confidence 999886644
No 316
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=84.86 E-value=2.8 Score=38.85 Aligned_cols=72 Identities=10% Similarity=0.001 Sum_probs=46.2
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHH-cCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc---CC
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHE-MGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR---GC 144 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~-~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~---~i 144 (523)
.+|++||+|+ +.+|..+++.+.+ .|+.|++++.+..... ... ..+.+ |..+.+.+.++.+.. ++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~--~~~--~~~~~-------Dv~~~~~v~~~~~~~~~~~i 71 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA--ENL--KFIKA-------DLTKQQDITNVLDIIKNVSF 71 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC--TTE--EEEEC-------CTTCHHHHHHHHHHTTTCCE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc--ccc--eEEec-------CcCCHHHHHHHHHHHHhCCC
Confidence 3678999996 6789999999988 7888888754332111 111 23333 355666666665433 68
Q ss_pred CEEEeCCC
Q 009903 145 TMLHPGYG 152 (523)
Q Consensus 145 d~Vi~~~g 152 (523)
|.++-.-+
T Consensus 72 d~lv~nAg 79 (244)
T 4e4y_A 72 DGIFLNAG 79 (244)
T ss_dssp EEEEECCC
T ss_pred CEEEECCc
Confidence 88886544
No 317
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=84.82 E-value=2.8 Score=40.72 Aligned_cols=32 Identities=9% Similarity=0.037 Sum_probs=27.9
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHc-CCcEEEEecC
Q 009903 72 EKILVANR-GEIAVRVIRTAHEM-GIPCVAVYST 103 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~-G~~vi~v~~~ 103 (523)
|+|||+|+ |.+|..+++.+.+. |++|++++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG 34 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999997 88999999999998 8999998643
No 318
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=84.78 E-value=1.9 Score=40.33 Aligned_cols=33 Identities=9% Similarity=0.032 Sum_probs=28.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLP 35 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999986 678999999999999999988643
No 319
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=84.77 E-value=1.4 Score=40.85 Aligned_cols=32 Identities=9% Similarity=0.059 Sum_probs=28.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGR 38 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 478999986 67899999999999999998854
No 320
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=84.73 E-value=1.9 Score=39.93 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=47.0
Q ss_pred ccEEEEE--cCcHHHHHHHHHHHHc--CCcEEEEecCCCCCCccccccC----eeEEcCCCCCCCCCCC----HHHHHHH
Q 009903 71 QEKILVA--NRGEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLAD----ESVCIGEAPSSQSYLL----IPNVLSA 138 (523)
Q Consensus 71 ~k~ILi~--g~g~~~~~vi~aa~~~--G~~vi~v~~~~~~~~~~~~~ad----~~~~~~~~~~~~~~~~----~~~l~~~ 138 (523)
|+||+|+ |.|.....+++++.+. ++++++|.++.. .......|. ..+.+++ .++.+ -+++++.
T Consensus 22 ~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~-~~~~~~~A~~~gIp~~~~~~----~~~~~r~~~~~~~~~~ 96 (229)
T 3auf_A 22 MIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRA-DAYGLERARRAGVDALHMDP----AAYPSRTAFDAALAER 96 (229)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESST-TCHHHHHHHHTTCEEEECCG----GGSSSHHHHHHHHHHH
T ss_pred CcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCC-chHHHHHHHHcCCCEEEECc----ccccchhhccHHHHHH
Confidence 4688888 8888999999998876 568777765532 233333332 2222221 11222 3567888
Q ss_pred HHHcCCCEEEeC
Q 009903 139 AISRGCTMLHPG 150 (523)
Q Consensus 139 ~~~~~id~Vi~~ 150 (523)
+++.++|.|+..
T Consensus 97 l~~~~~Dliv~a 108 (229)
T 3auf_A 97 LQAYGVDLVCLA 108 (229)
T ss_dssp HHHTTCSEEEES
T ss_pred HHhcCCCEEEEc
Confidence 888999988764
No 321
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=84.71 E-value=1.5 Score=45.69 Aligned_cols=88 Identities=13% Similarity=0.134 Sum_probs=58.6
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCc---ccc-ccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDAL---HVK-LADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~---~~~-~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~ 146 (523)
.|++.|.|.+.....+++.+.++|.+|+.+......... ... +.+..+.++ ..|..++.+++++.++|.
T Consensus 332 GKrv~i~~~~~~~~~l~~~L~ElGmevv~~gt~~~~~~d~~~~~~~l~~~~~i~~-------d~d~~el~~~i~~~~pDL 404 (483)
T 3pdi_A 332 GKRVLLYTGGVKSWSVVSALQDLGMKVVATGTKKSTEEDKARIRELMGDDVKMLD-------EGNARVLLKTVDEYQADI 404 (483)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHTCEEEEECBSSSCHHHHHHHHHHSCSSCCBCC-------SCSHHHHHHHHHHTTCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHCCCEEEEEecCCCCHHHHHHHHHhcCCCCEEEe-------CCCHHHHHHHHHhcCCCE
Confidence 589999988888889999999999999987433211100 001 122222221 246889999999999999
Q ss_pred EEeCCCcccccHHHHHHHHHcCCcee
Q 009903 147 LHPGYGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 147 Vi~~~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
++.+. .-..+++++|+|++
T Consensus 405 ~ig~~-------~~~~~a~k~gIP~~ 423 (483)
T 3pdi_A 405 LIAGG-------RNMYTALKGRVPFL 423 (483)
T ss_dssp EECCG-------GGHHHHHHTTCCBC
T ss_pred EEECC-------chhHHHHHcCCCEE
Confidence 99542 11245678889875
No 322
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=84.71 E-value=1.2 Score=42.19 Aligned_cols=33 Identities=6% Similarity=-0.000 Sum_probs=28.3
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRH 39 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999986 678999999999999999988543
No 323
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=84.70 E-value=1.8 Score=40.71 Aligned_cols=33 Identities=9% Similarity=0.060 Sum_probs=28.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999986 678999999999999999998543
No 324
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=84.67 E-value=1.4 Score=41.21 Aligned_cols=34 Identities=9% Similarity=0.113 Sum_probs=28.9
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 40 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARS 40 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 3578999996 678999999999999999988543
No 325
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=84.67 E-value=1 Score=45.26 Aligned_cols=35 Identities=9% Similarity=0.219 Sum_probs=31.0
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.+..+|+|+|+|..|..++..|++.|++|.+++..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 34568999999999999999999999999999644
No 326
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=84.65 E-value=1.7 Score=40.78 Aligned_cols=33 Identities=18% Similarity=0.174 Sum_probs=28.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN 40 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999986 678999999999999999988543
No 327
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=84.64 E-value=0.76 Score=45.06 Aligned_cols=143 Identities=11% Similarity=0.019 Sum_probs=75.6
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
|+.+|.|+|.|.+|...++.+.+. |++++.+. +.+.. ....++++.- + . +.+.++++ .+..+|+|+
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~-d~~~~-~~~~~~~~~~-~------~-~~~~~~~l---~~~~~D~V~ 68 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVA-DAFPA-AAEAIAGAYG-C------E-VRTIDAIE---AAADIDAVV 68 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEE-CSSHH-HHHHHHHHTT-C------E-ECCHHHHH---HCTTCCEEE
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEE-CCCHH-HHHHHHHHhC-C------C-cCCHHHHh---cCCCCCEEE
Confidence 567999999999999999999986 88887653 32221 1122222210 0 1 44555554 345699998
Q ss_pred eCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCC-ccCCCHHHHHHHHHh--cCCcEE
Q 009903 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLADE--LGFPVM 225 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~-~~~~s~~e~~~~~~~--~g~P~V 225 (523)
.+... ......+..+.+.|.+++.-.+-+. ...+-..+.+.+++.|+..--.+. +.......+.+.+++ +|-+..
T Consensus 69 i~tp~-~~h~~~~~~al~~gk~v~~EKP~~~-~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~ 146 (331)
T 4hkt_A 69 ICTPT-DTHADLIERFARAGKAIFCEKPIDL-DAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRIGEVEM 146 (331)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEECSCSCS-SHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTTCSEEE
T ss_pred EeCCc-hhHHHHHHHHHHcCCcEEEecCCCC-CHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCCCceEE
Confidence 76522 1234556666677876653211110 111122345566777765432211 111223445555543 566655
Q ss_pred EE
Q 009903 226 IK 227 (523)
Q Consensus 226 vK 227 (523)
+.
T Consensus 147 ~~ 148 (331)
T 4hkt_A 147 VT 148 (331)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 328
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=84.63 E-value=1.8 Score=40.37 Aligned_cols=33 Identities=12% Similarity=0.105 Sum_probs=28.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~ 40 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARR 40 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 578999986 678999999999999999988543
No 329
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=84.54 E-value=2.3 Score=39.73 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=28.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRN 45 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999986 678999999999999999988543
No 330
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=84.45 E-value=3 Score=39.30 Aligned_cols=70 Identities=13% Similarity=0.037 Sum_probs=44.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHH-----cCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RGC 144 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~i 144 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+...... +..+. .+..+.+.+.++.+. .++
T Consensus 28 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-----~~~~~-------~Dv~~~~~~~~~~~~~~~~~g~i 95 (266)
T 3uxy_A 28 GKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----DLHLP-------GDLREAAYADGLPGAVAAGLGRL 95 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-----SEECC-------CCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-----hhccC-------cCCCCHHHHHHHHHHHHHhcCCC
Confidence 578999986 678999999999999999888533221111 11111 234555555444432 279
Q ss_pred CEEEeCCC
Q 009903 145 TMLHPGYG 152 (523)
Q Consensus 145 d~Vi~~~g 152 (523)
|.++-.-+
T Consensus 96 D~lvnnAg 103 (266)
T 3uxy_A 96 DIVVNNAG 103 (266)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886544
No 331
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=84.42 E-value=1.1 Score=41.99 Aligned_cols=32 Identities=6% Similarity=0.067 Sum_probs=27.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|+|||+|+ |.+|..+++.+.+.|++|++++.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcC
Confidence 478999985 67899999999999999998854
No 332
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=84.42 E-value=1.9 Score=43.16 Aligned_cols=74 Identities=8% Similarity=-0.131 Sum_probs=47.9
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCC-----------------ccc---cc-cC--eeEEcCCCCCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDA-----------------LHV---KL-AD--ESVCIGEAPSS 126 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~-----------------~~~---~~-ad--~~~~~~~~~~~ 126 (523)
+++|||+|+ |.+|..+++.|.+.|++|++++....... ... .. .. +.+..
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~------ 84 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVG------ 84 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEES------
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEEC------
Confidence 578999986 78999999999999999999853211000 000 00 11 12222
Q ss_pred CCCCCHHHHHHHHHHcCCCEEEeCC
Q 009903 127 QSYLLIPNVLSAAISRGCTMLHPGY 151 (523)
Q Consensus 127 ~~~~~~~~l~~~~~~~~id~Vi~~~ 151 (523)
+..+.+.+.++++..++|.|+-.-
T Consensus 85 -Dl~d~~~~~~~~~~~~~D~Vih~A 108 (404)
T 1i24_A 85 -DICDFEFLAESFKSFEPDSVVHFG 108 (404)
T ss_dssp -CTTSHHHHHHHHHHHCCSEEEECC
T ss_pred -CCCCHHHHHHHHhccCCCEEEECC
Confidence 356777787877777899988554
No 333
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=84.38 E-value=3.5 Score=41.07 Aligned_cols=32 Identities=9% Similarity=0.164 Sum_probs=24.7
Q ss_pred ccEEEEEcCcHH-----HHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~g~~-----~~~vi~aa~~~G~~vi~v~~ 102 (523)
+||||++..+.. ...+++++++.|++|.++..
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~ 56 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA 56 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc
Confidence 457888854322 46899999999999999965
No 334
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=84.37 E-value=1.9 Score=44.86 Aligned_cols=88 Identities=11% Similarity=0.072 Sum_probs=60.3
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccc----cCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL----ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~----ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~ 146 (523)
.|++.|.|.+.....+++.+.++|.+++.+...........++ .+..+.++ ..|..++.+++++.++|.
T Consensus 348 GKrv~i~g~~~~~~~la~~L~ElGm~vv~~gt~~~~~~d~~~l~~~~~~~~~i~~-------~~d~~el~~~i~~~~pDL 420 (492)
T 3u7q_A 348 GKRVMLYIGGLRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTLLYD-------DVTGYEFEEFVKRIKPDL 420 (492)
T ss_dssp TCEEEECBSSSHHHHTHHHHHTTTCEEEEEEESSCCHHHHHHHHTTSCTTCEEEE-------SCBHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHCCCEEEEEeCCCCCHHHHHHHHHhCCCCcEEEc-------CCCHHHHHHHHHhcCCcE
Confidence 5889998888888999999999999999875432211111111 12223332 346888999999999999
Q ss_pred EEeCCCcccccHHHHHHHHHcCCcee
Q 009903 147 LHPGYGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 147 Vi~~~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
++.+. .-..+++++|+|++
T Consensus 421 ~ig~~-------~~~~ia~k~gIP~~ 439 (492)
T 3u7q_A 421 IGSGI-------KEKFIFQKMGIPFR 439 (492)
T ss_dssp EEECH-------HHHHHHHHTTCCEE
T ss_pred EEeCc-------chhHHHHHcCCCEE
Confidence 99532 23467788999976
No 335
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=84.35 E-value=3.6 Score=39.54 Aligned_cols=104 Identities=17% Similarity=0.090 Sum_probs=60.3
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEE-EEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCV-AVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi-~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
.++|+|+|. |..|..+++.+++.|++++ .+ ++... ........+ |.+++++ .++..+|+++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~V--nP~~~--g~~i~G~~v----------y~sl~el---~~~~~~Dv~I 69 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGV--TPGKG--GMEVLGVPV----------YDTVKEA---VAHHEVDASI 69 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE--CTTCT--TCEETTEEE----------ESSHHHH---HHHSCCSEEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEE--CCCCC--CceECCEEe----------eCCHHHH---hhcCCCCEEE
Confidence 468999997 8889999999999999954 44 33221 111222222 3344444 3345788877
Q ss_pred eCCCcccccHHHHHHHHHcCCc-ee-CC---CHHHHHHhCCHHHHHHHHHHCCCC
Q 009903 149 PGYGFLAENAVFVEMCREHGIN-FI-GP---NPDSIRIMGDKSTARETMKNAGVP 198 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~-~~-g~---~~~~~~~~~dK~~~r~~l~~~Gip 198 (523)
..... .......+.+.+.|++ ++ .+ +.+ +...+.+.+++.|+.
T Consensus 70 i~vp~-~~~~~~~~ea~~~Gi~~vVi~t~G~~~~------~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 70 IFVPA-PAAADAALEAAHAGIPLIVLITEGIPTL------DMVRAVEEIKALGSR 117 (288)
T ss_dssp ECCCH-HHHHHHHHHHHHTTCSEEEECCSCCCHH------HHHHHHHHHHHHTCE
T ss_pred EecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHH------HHHHHHHHHHHcCCE
Confidence 54311 0124555666777887 22 22 221 245667777778873
No 336
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=84.32 E-value=1.4 Score=40.32 Aligned_cols=61 Identities=8% Similarity=-0.052 Sum_probs=45.1
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-CCCEEE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-~id~Vi 148 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.. + |..+.+.+.+++++. ++|.++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~-------D~~~~~~v~~~~~~~g~id~lv 64 (223)
T 3uce_A 6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------L-------DISDEKSVYHYFETIGAFDHLI 64 (223)
T ss_dssp CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------C-------CTTCHHHHHHHHHHHCSEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------c-------CCCCHHHHHHHHHHhCCCCEEE
Confidence 578999986 67899999999999999998853322 2 255667777776654 688888
Q ss_pred eCCC
Q 009903 149 PGYG 152 (523)
Q Consensus 149 ~~~g 152 (523)
-..+
T Consensus 65 ~nAg 68 (223)
T 3uce_A 65 VTAG 68 (223)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 6544
No 337
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=84.30 E-value=1.2 Score=42.13 Aligned_cols=69 Identities=17% Similarity=0.053 Sum_probs=45.3
Q ss_pred EEEEEcC-cHHHHHHHHHHHHc--CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 73 KILVANR-GEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 73 ~ILi~g~-g~~~~~vi~aa~~~--G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
+|||+|+ |.+|..+++.+.+. |++|++++.+...........-+.+.. +..+.+.+.++.+ ++|.|+-
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------D~~d~~~~~~~~~--~~d~vi~ 71 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQA-------DYGDEAALTSALQ--GVEKLLL 71 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEEC-------CTTCHHHHHHHTT--TCSEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEc-------CCCCHHHHHHHHh--CCCEEEE
Confidence 4899996 88999999999998 999999964433211000001122332 4667777777664 5898885
Q ss_pred C
Q 009903 150 G 150 (523)
Q Consensus 150 ~ 150 (523)
.
T Consensus 72 ~ 72 (286)
T 2zcu_A 72 I 72 (286)
T ss_dssp C
T ss_pred e
Confidence 4
No 338
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=84.29 E-value=1.1 Score=42.82 Aligned_cols=33 Identities=15% Similarity=0.322 Sum_probs=29.9
Q ss_pred CCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 69 ~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
+|+++|.|+|. |.+|..+++.+.+.|++|++++
T Consensus 9 ~mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~ 42 (286)
T 3c24_A 9 VGPKTVAILGAGGKMGARITRKIHDSAHHLAAIE 42 (286)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHSSSEEEEEC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEE
Confidence 45679999999 9999999999999999998874
No 339
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=84.28 E-value=1.6 Score=40.63 Aligned_cols=77 Identities=10% Similarity=0.043 Sum_probs=46.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-----C
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----G 143 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~ 143 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+.... ...+......+. .|..+.+.+.+++++. +
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dv~~~~~v~~~~~~~~~~~g~ 80 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIA-----ADISDPGSVKALFAEIQALTGG 80 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECC-----CCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEE-----cCCCCHHHHHHHHHHHHHHCCC
Confidence 578999986 678999999999999999988533221100 011111222221 2345555555554432 7
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.++-.-+
T Consensus 81 id~lv~nAg 89 (247)
T 3rwb_A 81 IDILVNNAS 89 (247)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999886544
No 340
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=84.24 E-value=1.4 Score=41.84 Aligned_cols=33 Identities=6% Similarity=0.075 Sum_probs=28.2
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRS 39 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999986 678999999999999999998543
No 341
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=84.19 E-value=1.3 Score=42.15 Aligned_cols=31 Identities=10% Similarity=0.001 Sum_probs=27.2
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~ 57 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVAGARILING 57 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 578999986 6789999999999999988874
No 342
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=84.16 E-value=2 Score=40.76 Aligned_cols=76 Identities=16% Similarity=0.148 Sum_probs=47.1
Q ss_pred CccEEEEEcC-c--HHHHHHHHHHHHcCCcEEEEecCCCCCCccccc----cC-eeEEcCCCCCCCCCCCHHHHHHHHHH
Q 009903 70 RQEKILVANR-G--EIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL----AD-ESVCIGEAPSSQSYLLIPNVLSAAIS 141 (523)
Q Consensus 70 ~~k~ILi~g~-g--~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~----ad-~~~~~~~~~~~~~~~~~~~l~~~~~~ 141 (523)
..|++||+|+ | .+|..+++.+.+.|++|++++.+. .......+ .. ..+.+ |..+.+.+.+++++
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~-------Dl~~~~~v~~~~~~ 96 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEFNPAAVLPC-------DVISDQEIKDLFVE 96 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGGCCSEEEEC-------CTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhcCCceEEEe-------ecCCHHHHHHHHHH
Confidence 3578999995 3 389999999999999999986443 11111111 11 22333 35566666655544
Q ss_pred c-----CCCEEEeCCCc
Q 009903 142 R-----GCTMLHPGYGF 153 (523)
Q Consensus 142 ~-----~id~Vi~~~g~ 153 (523)
. ++|.++-..+.
T Consensus 97 ~~~~~g~id~li~nAg~ 113 (280)
T 3nrc_A 97 LGKVWDGLDAIVHSIAF 113 (280)
T ss_dssp HHHHCSSCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCcc
Confidence 2 68998866543
No 343
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=84.14 E-value=1.7 Score=41.49 Aligned_cols=77 Identities=9% Similarity=0.012 Sum_probs=46.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccc---cCeeEEcCCCCCCCCCCCHHHHHHHHHHc---
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKL---ADESVCIGEAPSSQSYLLIPNVLSAAISR--- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~---ad~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 142 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+.... ...+ ......+. .|..+.+.+.+++++.
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-----~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALE-----ADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEE-----CCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE-----ccCCCHHHHHHHHHHHHHH
Confidence 478999986 678999999999999999998643221110 0001 11121111 1355666655555432
Q ss_pred --CCCEEEeCCC
Q 009903 143 --GCTMLHPGYG 152 (523)
Q Consensus 143 --~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 103 ~g~iD~lVnnAg 114 (283)
T 3v8b_A 103 FGHLDIVVANAG 114 (283)
T ss_dssp HSCCCEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 7999886544
No 344
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=84.08 E-value=1.6 Score=40.93 Aligned_cols=32 Identities=13% Similarity=0.152 Sum_probs=28.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSR 41 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 478999986 67899999999999999998854
No 345
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=83.99 E-value=3.9 Score=40.42 Aligned_cols=119 Identities=4% Similarity=-0.059 Sum_probs=63.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
..+|+|+|.|..|..+++.+...|+.-+.+. |.+... ...+..+++.-. .+. .....+.+.+.+++.+++.-+..
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlv-D~d~V~-~sNL~rq~~~~~--~di-G~~Ka~~~~~~l~~lnp~v~v~~ 110 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTML-DHEQVT-PEDPGAQFLIRT--GSV-GRNRAEASLERAQNLNPMVDVKV 110 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEE-CCCBCC-SSCGGGCTTSCS--SCT-TSBHHHHHHHHHHHTCTTSEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEE-ECCCcc-hhhCCCCCcccc--ccC-cCCHHHHHHHHHHhHCCCeEEEE
Confidence 5789999999999999999999999644443 333221 111222222100 000 12346677777777776643322
Q ss_pred -CCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCC
Q 009903 151 -YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVP 201 (523)
Q Consensus 151 -~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~ 201 (523)
.+...+. ..+.+....+-+.+.+.. ..+....+.+.++++|...
T Consensus 111 ~~~~~~~~--~~~~~~~~dvVv~~~d~~-----~~r~~ln~~~~~~~ip~i~ 155 (346)
T 1y8q_A 111 DTEDIEKK--PESFFTQFDAVCLTCCSR-----DVIVKVDQICHKNSIKFFT 155 (346)
T ss_dssp ECSCGGGC--CHHHHTTCSEEEEESCCH-----HHHHHHHHHHHHTTCEEEE
T ss_pred EecccCcc--hHHHhcCCCEEEEcCCCH-----HHHHHHHHHHHHcCCCEEE
Confidence 2222121 124444444443333222 2345566778888877553
No 346
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=83.99 E-value=4.5 Score=38.47 Aligned_cols=34 Identities=9% Similarity=0.190 Sum_probs=29.1
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI 104 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~ 104 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence 478999986 6789999999999999999986544
No 347
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=83.96 E-value=1.5 Score=41.09 Aligned_cols=77 Identities=6% Similarity=0.016 Sum_probs=46.1
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccc-c---ccCeeEEcCCCCCCCCCCCHHHHHHHHHHc---
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-K---LADESVCIGEAPSSQSYLLIPNVLSAAISR--- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-~---~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 142 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+...... . .......+. .|..+.+.+.+++++.
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQ-----MDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEE-----CCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE-----ccCCCHHHHHHHHHHHHHH
Confidence 478999986 67899999999999999998854322111000 0 011121111 1355566655554432
Q ss_pred --CCCEEEeCCC
Q 009903 143 --GCTMLHPGYG 152 (523)
Q Consensus 143 --~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 81 ~g~id~lv~nAg 92 (257)
T 3imf_A 81 FGRIDILINNAA 92 (257)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 7999886544
No 348
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=83.92 E-value=6.5 Score=36.51 Aligned_cols=144 Identities=10% Similarity=0.049 Sum_probs=79.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
||.++.+.+|--+.-.+.-|++.|++|+.+........ +...+ .....+.+...++..++...+..
T Consensus 5 MKvvvl~SGGkDSs~al~~l~~~G~eV~~L~~~~~~~~------~s~~~--------h~~~~e~a~~~A~~LGIpl~~v~ 70 (237)
T 3rjz_A 5 ADVAVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSENE------ESYMY--------HTINANLTDLQARALGIPLVKGF 70 (237)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEEECC----------------------CCSSSHHHHHHHHHTCCEEEEE
T ss_pred CEEEEEecCcHHHHHHHHHHHHcCCeEEEEEEEcCCCC------Ccccc--------CCccHHHHHHHHHHcCCCEEEEE
Confidence 34444444554333444456788999987742211110 11110 01223356667777888765432
Q ss_pred -CCc-ccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCCccCCCHHHHHHHHHhcCCcEEEEe
Q 009903 151 -YGF-LAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKA 228 (523)
Q Consensus 151 -~g~-~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~~~~~s~~e~~~~~~~~g~P~VvKP 228 (523)
.+. ..+...+.+.+++.|+..+ ..-++.....|.+....+.++|+..--. ..-.+.+++.+-.-..||-++|--
T Consensus 71 ~~g~~~~e~e~l~~~l~~~~i~~v--v~Gdi~s~yqr~r~e~vc~~~gl~~~~P--LW~~d~~~Ll~e~i~~G~~aiiv~ 146 (237)
T 3rjz_A 71 TQGEKEKEVEDLKRVLSGLKIQGI--VAGALASKYQRKRIEKVAKELGLEVYTP--AWGRDAKEYMRELLNLGFKIMVVG 146 (237)
T ss_dssp C------CHHHHHHHHTTSCCSEE--ECC---CCSHHHHHHHHHHHTTCEEECS--SSSCCHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCchHHHHHHHHHHHhcCCcEE--EECCcchHHHHHHHHHHHHHcCCEEEcc--ccCCCHHHHHHHHHHCCCEEEEEE
Confidence 221 1123455566666676533 2334666677888999999999886544 456788888777778899877766
Q ss_pred CCCC
Q 009903 229 TAGG 232 (523)
Q Consensus 229 ~~g~ 232 (523)
+...
T Consensus 147 v~~~ 150 (237)
T 3rjz_A 147 VSAY 150 (237)
T ss_dssp EEST
T ss_pred EecC
Confidence 6543
No 349
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=83.86 E-value=4.6 Score=37.28 Aligned_cols=69 Identities=9% Similarity=0.083 Sum_probs=44.7
Q ss_pred ccEEEEEcC-----------------cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHH
Q 009903 71 QEKILVANR-----------------GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIP 133 (523)
Q Consensus 71 ~k~ILi~g~-----------------g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~ 133 (523)
.|+|||.|+ |.+|..+++++.+.|++|++++....... ....-.+ +..+.+
T Consensus 8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~-----~~g~~~~-------dv~~~~ 75 (226)
T 1u7z_A 8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT-----PPFVKRV-------DVMTAL 75 (226)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC-----CTTEEEE-------ECCSHH
T ss_pred CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccccc-----CCCCeEE-------ccCcHH
Confidence 578999988 67999999999999999999853322111 0111112 244566
Q ss_pred HHHHHHHH--cCCCEEEeCC
Q 009903 134 NVLSAAIS--RGCTMLHPGY 151 (523)
Q Consensus 134 ~l~~~~~~--~~id~Vi~~~ 151 (523)
++.+.+.+ .++|.++-.-
T Consensus 76 ~~~~~v~~~~~~~Dili~~A 95 (226)
T 1u7z_A 76 EMEAAVNASVQQQNIFIGCA 95 (226)
T ss_dssp HHHHHHHHHGGGCSEEEECC
T ss_pred HHHHHHHHhcCCCCEEEECC
Confidence 66665543 3589888543
No 350
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=83.80 E-value=2.6 Score=40.03 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=28.1
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 62 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN 62 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999985 678999999999999999988543
No 351
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.79 E-value=1.5 Score=41.26 Aligned_cols=33 Identities=9% Similarity=0.089 Sum_probs=28.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 43 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRS 43 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999986 678999999999999999988543
No 352
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=83.66 E-value=1.5 Score=41.85 Aligned_cols=75 Identities=13% Similarity=0.114 Sum_probs=46.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccC--eeEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~---- 142 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+.... ...+.. ..+.+ |..+.+.+.+++++.
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRV-------DVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEe-------cCCCHHHHHHHHHHHHHHc
Confidence 578999986 568999999999999999998643221110 011111 22332 355666665554432
Q ss_pred -CCCEEEeCCC
Q 009903 143 -GCTMLHPGYG 152 (523)
Q Consensus 143 -~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 102 g~iD~lvnnAg 112 (277)
T 3gvc_A 102 GGVDKLVANAG 112 (277)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7999886544
No 353
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=83.64 E-value=4.6 Score=37.41 Aligned_cols=70 Identities=13% Similarity=0.071 Sum_probs=44.7
Q ss_pred ccEEEEEcC-----------------cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHH
Q 009903 71 QEKILVANR-----------------GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIP 133 (523)
Q Consensus 71 ~k~ILi~g~-----------------g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~ 133 (523)
.|+|||.|+ |.+|..+++++.++|++|++++......... ......+ +....+
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~---~~~~~~~-------~v~s~~ 72 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEP---HPNLSIR-------EITNTK 72 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCC---CTTEEEE-------ECCSHH
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccC---CCCeEEE-------EHhHHH
Confidence 468888877 4689999999999999999997433221100 0111122 244666
Q ss_pred HHHHHHHH--cCCCEEEeC
Q 009903 134 NVLSAAIS--RGCTMLHPG 150 (523)
Q Consensus 134 ~l~~~~~~--~~id~Vi~~ 150 (523)
++.+.+.+ .++|.++-.
T Consensus 73 em~~~v~~~~~~~Dili~a 91 (232)
T 2gk4_A 73 DLLIEMQERVQDYQVLIHS 91 (232)
T ss_dssp HHHHHHHHHGGGCSEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEc
Confidence 66665544 258988854
No 354
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=83.63 E-value=2 Score=40.88 Aligned_cols=77 Identities=12% Similarity=0.028 Sum_probs=46.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-----C
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----G 143 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~ 143 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+.... ...+......+. .|..+.+.+.+++++. +
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dv~d~~~v~~~~~~~~~~~g~ 101 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVR-----VDVSSAKDAESMVEKTTAKWGR 101 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEE-----CCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEE-----ecCCCHHHHHHHHHHHHHHcCC
Confidence 578999986 678999999999999999998643221110 001111222111 1355666665555432 7
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.++-.-|
T Consensus 102 iD~lv~nAg 110 (277)
T 4dqx_A 102 VDVLVNNAG 110 (277)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999886544
No 355
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=83.57 E-value=1.7 Score=40.19 Aligned_cols=31 Identities=13% Similarity=0.098 Sum_probs=27.2
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~ 36 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNG 36 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 478999986 6789999999999999999884
No 356
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=83.51 E-value=1.3 Score=43.28 Aligned_cols=35 Identities=9% Similarity=0.133 Sum_probs=30.8
Q ss_pred CCCccEEEEEcCcHHHHHHHHHHHHcCC--cEEEEec
Q 009903 68 TCRQEKILVANRGEIAVRVIRTAHEMGI--PCVAVYS 102 (523)
Q Consensus 68 ~~~~k~ILi~g~g~~~~~vi~aa~~~G~--~vi~v~~ 102 (523)
++|+++|.|+|.|.+|..+++.+++.|+ +|++++.
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr 66 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDI 66 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 4567899999999999999999999999 8888743
No 357
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=83.48 E-value=1.2 Score=43.31 Aligned_cols=36 Identities=11% Similarity=0.124 Sum_probs=28.9
Q ss_pred CCCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 68 TCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 68 ~~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
+.|.|+|||+|+ |.+|..+++.|.+.|++|+++..+
T Consensus 6 ~~~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~ 42 (338)
T 2rh8_A 6 PIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRD 42 (338)
T ss_dssp ---CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcC
Confidence 446789999995 889999999999999999876533
No 358
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=83.47 E-value=1.1 Score=42.00 Aligned_cols=75 Identities=11% Similarity=-0.051 Sum_probs=44.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccc---cCeeEEcCCCCCCCCCCCHHHHHHHHHH--cCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL---ADESVCIGEAPSSQSYLLIPNVLSAAIS--RGC 144 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~---ad~~~~~~~~~~~~~~~~~~~l~~~~~~--~~i 144 (523)
||++||+|+ +.+|..+++.+.+.|++|++++.+.+.......+ ..+...+ +..+.+.+++.+.+ .++
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-------d~~~v~~~~~~~~~~~g~i 73 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-------SEQEPAELIEAVTSAYGQV 73 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-------CCCSHHHHHHHHHHHHSCC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-------CHHHHHHHHHHHHHHhCCC
Confidence 468999986 6689999999999999999885432211100001 1111221 34556666654433 278
Q ss_pred CEEEeCCC
Q 009903 145 TMLHPGYG 152 (523)
Q Consensus 145 d~Vi~~~g 152 (523)
|.++-.-+
T Consensus 74 D~lv~nAg 81 (254)
T 1zmt_A 74 DVLVSNDI 81 (254)
T ss_dssp CEEEEECC
T ss_pred CEEEECCC
Confidence 98886544
No 359
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=83.47 E-value=2.5 Score=40.11 Aligned_cols=31 Identities=13% Similarity=0.073 Sum_probs=27.7
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 62 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG 62 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc
Confidence 578999986 6789999999999999999886
No 360
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=83.32 E-value=1.4 Score=43.08 Aligned_cols=88 Identities=16% Similarity=0.121 Sum_probs=51.2
Q ss_pred cEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009903 72 EKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (523)
Q Consensus 72 k~ILi~g~g~~~~~vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~~ 150 (523)
.+|.|+|.|.+|..+++.+.+. +++++.+. +.+.. ....+++++- + ...+.+.++++ +..+|+|+.+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~-d~~~~-~~~~~~~~~~-~-----~~~~~~~~~~l----~~~~D~V~i~ 69 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIY-SRKLE-TAATFASRYQ-N-----IQLFDQLEVFF----KSSFDLVYIA 69 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEE-CSSHH-HHHHHGGGSS-S-----CEEESCHHHHH----TSSCSEEEEC
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEE-eCCHH-HHHHHHHHcC-C-----CeEeCCHHHHh----CCCCCEEEEe
Confidence 5799999999999999999887 57776553 32221 1122232210 0 00144555554 4579999876
Q ss_pred CCcccccHHHHHHHHHcCCcee
Q 009903 151 YGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 151 ~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
... .....++..+.+.|.+++
T Consensus 70 tp~-~~h~~~~~~al~~gk~V~ 90 (325)
T 2ho3_A 70 SPN-SLHFAQAKAALSAGKHVI 90 (325)
T ss_dssp SCG-GGHHHHHHHHHHTTCEEE
T ss_pred CCh-HHHHHHHHHHHHcCCcEE
Confidence 531 123455555566676554
No 361
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=83.25 E-value=2 Score=40.71 Aligned_cols=31 Identities=13% Similarity=0.194 Sum_probs=27.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 62 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTY 62 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 478999996 6789999999999999998885
No 362
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=83.23 E-value=8.8 Score=36.07 Aligned_cols=33 Identities=9% Similarity=-0.049 Sum_probs=28.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecc
Confidence 578999986 678999999999999999998643
No 363
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=83.21 E-value=3.9 Score=38.19 Aligned_cols=30 Identities=40% Similarity=0.469 Sum_probs=25.8
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEE
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAV 100 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v 100 (523)
|+||.|+|.|.+|..+++++.+.+.+++.+
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~eLva~ 32 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGHEIVGV 32 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCCEEEEE
Confidence 478999999999999999999987765554
No 364
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=83.12 E-value=7.6 Score=36.75 Aligned_cols=34 Identities=12% Similarity=-0.007 Sum_probs=29.1
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEecc
Confidence 3588999996 578999999999999999998643
No 365
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=83.11 E-value=2.6 Score=43.13 Aligned_cols=112 Identities=13% Similarity=0.036 Sum_probs=66.4
Q ss_pred cEEEEEcCcHHHHHHHHHHHH----------cCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHH
Q 009903 72 EKILVANRGEIAVRVIRTAHE----------MGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS 141 (523)
Q Consensus 72 k~ILi~g~g~~~~~vi~aa~~----------~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~ 141 (523)
-+|.|+|.|..|..+++.+.+ .+++++.+. +.+... ...+++.. .-+.+.++++ .+
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~-d~~~~~-~~~~~~~~---------~~~~d~~ell---~d 76 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAA-VRNLDK-AEALAGGL---------PLTTNPFDVV---DD 76 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEE-CSCHHH-HHHHHTTC---------CEESCTHHHH---TC
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEE-ECCHHH-hhhhcccC---------cccCCHHHHh---cC
Confidence 489999999999887776653 355666654 222211 11111111 1134555544 34
Q ss_pred cCCCEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCC
Q 009903 142 RGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT 199 (523)
Q Consensus 142 ~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~ 199 (523)
..+|+|+-+.+.......+...+.+.|.+++..++. . ...+=..+.++.+++|+..
T Consensus 77 ~diDvVve~tp~~~~h~~~~~~AL~aGKhVvtenka-l-~a~~~~eL~~~A~~~gv~l 132 (444)
T 3mtj_A 77 PEIDIVVELIGGLEPARELVMQAIANGKHVVTANKH-L-VAKYGNEIFAAAQAKGVMV 132 (444)
T ss_dssp TTCCEEEECCCSSTTHHHHHHHHHHTTCEEEECCHH-H-HHHHHHHHHHHHHHHTCCE
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHcCCEEEECCcc-c-CHHHHHHHHHHHHHhCCeE
Confidence 578999876542223346667777889998876673 2 3334456777788888765
No 366
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=83.08 E-value=1.5 Score=42.66 Aligned_cols=33 Identities=9% Similarity=0.157 Sum_probs=28.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|+|||+|+ |.+|..+++.+.+.|++|+++..+
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECC
Confidence 578999996 678999999999999999988543
No 367
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=83.04 E-value=5.8 Score=38.76 Aligned_cols=83 Identities=11% Similarity=0.007 Sum_probs=53.5
Q ss_pred ccEEEEEcCcHHHH-HHHHHHHHc-CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHH-cCCCEE
Q 009903 71 QEKILVANRGEIAV-RVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-RGCTML 147 (523)
Q Consensus 71 ~k~ILi~g~g~~~~-~vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~-~~id~V 147 (523)
+.+|.|+|.|.++. ..++++++. +++++.+. +.+.... .-. .|.+.+++++ + ..+|+|
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~-d~~~~~~-----g~~----------~~~~~~~ll~---~~~~vD~V 85 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATA-SRHGTVE-----GVN----------SYTTIEAMLD---AEPSIDAV 85 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEE-CSSCCCT-----TSE----------EESSHHHHHH---HCTTCCEE
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEE-eCChhhc-----CCC----------ccCCHHHHHh---CCCCCCEE
Confidence 35999999999998 688888887 78877765 3332210 101 1456666654 3 569999
Q ss_pred EeCCCcccccHHHHHHHHHcCCceeC
Q 009903 148 HPGYGFLAENAVFVEMCREHGINFIG 173 (523)
Q Consensus 148 i~~~g~~~e~~~~a~~~~~~gl~~~g 173 (523)
+.+... .....++..+.+.|.+++.
T Consensus 86 ~i~tp~-~~H~~~~~~al~aGkhVl~ 110 (330)
T 4ew6_A 86 SLCMPP-QYRYEAAYKALVAGKHVFL 110 (330)
T ss_dssp EECSCH-HHHHHHHHHHHHTTCEEEE
T ss_pred EEeCCc-HHHHHHHHHHHHcCCcEEE
Confidence 876531 1234666667778887763
No 368
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=83.01 E-value=2.2 Score=40.19 Aligned_cols=77 Identities=8% Similarity=-0.043 Sum_probs=48.2
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccc-----cCeeEEcCCCCCCCCCCCHHHHHHHHHHc-
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKL-----ADESVCIGEAPSSQSYLLIPNVLSAAISR- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~-----ad~~~~~~~~~~~~~~~~~~~l~~~~~~~- 142 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+.... ...+ ......+ ..+..+.+.+.++.++.
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-----~~D~~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV-----VADLGTEQGCQDVIEKYP 84 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEE-----ECCTTSHHHHHHHHHHCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEE-----ecCCCCHHHHHHHHHhcC
Confidence 578999986 678999999999999999998543221100 0000 0111111 12356677777777665
Q ss_pred CCCEEEeCCC
Q 009903 143 GCTMLHPGYG 152 (523)
Q Consensus 143 ~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 85 ~id~lv~nAg 94 (267)
T 3t4x_A 85 KVDILINNLG 94 (267)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6898886544
No 369
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=83.00 E-value=1.3 Score=43.75 Aligned_cols=73 Identities=10% Similarity=0.049 Sum_probs=46.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHc-CC-cEEEEecCCCCCCc-cccc--cC-eeEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEM-GI-PCVAVYSTIDKDAL-HVKL--AD-ESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~-G~-~vi~v~~~~~~~~~-~~~~--ad-~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 143 (523)
.|+|||+|+ |.+|..+++.+.+. |+ +|++++.+...... ...+ .. +.+.. +..+.+.+.++.+ +
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~-------Dl~d~~~l~~~~~--~ 91 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIG-------DVRDLERLNYALE--G 91 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEEC-------CTTCHHHHHHHTT--T
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEEC-------CCCCHHHHHHHHh--c
Confidence 478999996 88999999999999 98 88887543211100 0000 01 12222 4667777777664 6
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.|+-..+
T Consensus 92 ~D~Vih~Aa 100 (344)
T 2gn4_A 92 VDICIHAAA 100 (344)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999886543
No 370
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=82.94 E-value=2.6 Score=38.94 Aligned_cols=33 Identities=24% Similarity=0.209 Sum_probs=28.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 578999986 678999999999999999988543
No 371
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=82.94 E-value=1.2 Score=41.37 Aligned_cols=32 Identities=13% Similarity=0.090 Sum_probs=28.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|+|||+|+ |.+|..+++.+.+.|++|++++.
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r 43 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDI 43 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcC
Confidence 478999986 77899999999999999998854
No 372
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=82.93 E-value=1.1 Score=43.91 Aligned_cols=35 Identities=9% Similarity=-0.014 Sum_probs=29.1
Q ss_pred CCCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 68 TCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 68 ~~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
++..++|.|+|+|.+|..++..+...|++|++++.
T Consensus 3 ~p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~ 37 (319)
T 3ado_A 3 SPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 44567999999999999999999999999999954
No 373
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=82.91 E-value=4.6 Score=39.01 Aligned_cols=72 Identities=18% Similarity=-0.041 Sum_probs=45.5
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcC--CcEEEEecCCCCC--Ccccccc--C--eeEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009903 72 EKILVANR-GEIAVRVIRTAHEMG--IPCVAVYSTIDKD--ALHVKLA--D--ESVCIGEAPSSQSYLLIPNVLSAAISR 142 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~G--~~vi~v~~~~~~~--~~~~~~a--d--~~~~~~~~~~~~~~~~~~~l~~~~~~~ 142 (523)
|+|||+|+ |.+|..+++.+.+.| ++|++++...... .....+. . +.+.. +..+.+.+.+++ .
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~--~ 74 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKG-------DVADYELVKELV--R 74 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEEC-------CTTCHHHHHHHH--H
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEc-------CCCCHHHHHHHh--h
Confidence 57999995 889999999999997 8898885432111 1011111 1 12222 356677777766 4
Q ss_pred CCCEEEeCCC
Q 009903 143 GCTMLHPGYG 152 (523)
Q Consensus 143 ~id~Vi~~~g 152 (523)
++|.|+-..+
T Consensus 75 ~~d~vih~A~ 84 (336)
T 2hun_A 75 KVDGVVHLAA 84 (336)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999886543
No 374
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=82.90 E-value=1.6 Score=40.72 Aligned_cols=75 Identities=13% Similarity=0.124 Sum_probs=46.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccC--eeEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~---- 142 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+.... ...+.+ ..+.+ |..+.+.+.+++++.
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL-------NVTNPESIEAVLKAITDEF 81 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEE-------eCCCHHHHHHHHHHHHHHc
Confidence 478999986 678999999999999999988543221110 011111 22333 355666655555432
Q ss_pred -CCCEEEeCCC
Q 009903 143 -GCTMLHPGYG 152 (523)
Q Consensus 143 -~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 82 g~iD~lv~nAg 92 (248)
T 3op4_A 82 GGVDILVNNAG 92 (248)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7999886544
No 375
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=82.88 E-value=3.1 Score=40.05 Aligned_cols=74 Identities=11% Similarity=0.078 Sum_probs=42.0
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
-..++|+|+|.|..|..+++.+.+.|+..+.+. |.|.... +.+....+. ..+ -.....+...+.+++.+++.-+
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGVG~i~lv-D~D~Ve~-sNL~Rq~~~---~~d-iG~~Ka~aa~~~L~~iNP~v~v 107 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLF-DYDKVEL-ANMNRLFFQ---PHQ-AGLSKVQAAEHTLRNINPDVLF 107 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEE-CCCBC----------------CC-TTSBHHHHHHHHHHHHCTTSEE
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEE-CCCccCh-hhcccccCC---hhh-cCchHHHHHHHHHHhhCCCcEE
Confidence 346799999999999999999999998765554 3332221 112222221 011 1123355666667777766544
No 376
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=82.87 E-value=2.4 Score=42.49 Aligned_cols=33 Identities=15% Similarity=0.177 Sum_probs=25.5
Q ss_pred CccEEEEEcCcHH-----HHHHHHHHHHcCCcEEEEec
Q 009903 70 RQEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 70 ~~k~ILi~g~g~~-----~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|++||++..+.. ...+++++++.|++|.++..
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~ 56 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTA 56 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeC
Confidence 3567888765433 46799999999999999963
No 377
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=82.84 E-value=0.69 Score=45.86 Aligned_cols=147 Identities=10% Similarity=-0.005 Sum_probs=78.2
Q ss_pred CccEEEEEcCcHHHH-HHHHHHHHc-CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 70 RQEKILVANRGEIAV-RVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~-~vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
|+.+|.|+|.|.+|. ..+..+++. +++++.+.+ .+ ....+++++- + +....+.+.+++++ ...+|+|
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d-~~---~~~~~a~~~~-~---~~~~~~~~~~~ll~---~~~~D~V 69 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFD-LH---VNEKAAAPFK-E---KGVNFTADLNELLT---DPEIELI 69 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEEC-TT---CCHHHHHHHH-T---TTCEEESCTHHHHS---CTTCCEE
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEEC-CC---HHHHHHHhhC-C---CCCeEECCHHHHhc---CCCCCEE
Confidence 567999999999987 567777665 788877653 22 2233332210 0 00011455566554 3569999
Q ss_pred EeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCC-ccCCCHHHHHHHHH--hcCCcE
Q 009903 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLAD--ELGFPV 224 (523)
Q Consensus 148 i~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~-~~~~s~~e~~~~~~--~~g~P~ 224 (523)
+.+... .....++..+.+.|.+++.-.|-+. ...+=..+.+.+++.|+..--.+. +.......+.+.++ .+|-+.
T Consensus 70 ~i~tp~-~~h~~~~~~al~aGk~Vl~EKP~a~-~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~ 147 (349)
T 3i23_A 70 TICTPA-HTHYDLAKQAILAGKSVIVEKPFCD-TLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVEQGFLGEIN 147 (349)
T ss_dssp EECSCG-GGHHHHHHHHHHTTCEEEECSCSCS-SHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTTCSEE
T ss_pred EEeCCc-HHHHHHHHHHHHcCCEEEEECCCcC-CHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCCCCCEE
Confidence 876532 1235666667778887763222111 111222345566777776432211 11122345555554 456666
Q ss_pred EEEeC
Q 009903 225 MIKAT 229 (523)
Q Consensus 225 VvKP~ 229 (523)
.+.-.
T Consensus 148 ~~~~~ 152 (349)
T 3i23_A 148 EVETH 152 (349)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55543
No 378
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=82.81 E-value=2.1 Score=40.62 Aligned_cols=32 Identities=16% Similarity=0.083 Sum_probs=27.9
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r 61 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICAR 61 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 478999986 67899999999999999998853
No 379
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=82.81 E-value=1.3 Score=42.20 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=28.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 28 ~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~ 61 (286)
T 1xu9_A 28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS 61 (286)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 578999986 678999999999999999988543
No 380
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=82.79 E-value=2.2 Score=39.19 Aligned_cols=31 Identities=3% Similarity=0.195 Sum_probs=21.4
Q ss_pred ccEEEEEcCcHHHHHHHHH--HHHcCCcEEEEe
Q 009903 71 QEKILVANRGEIAVRVIRT--AHEMGIPCVAVY 101 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~a--a~~~G~~vi~v~ 101 (523)
.++|+|+|+|..|..+++. ....|++++.+.
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~ 117 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAF 117 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEE
Confidence 3579999999999999984 556799988775
No 381
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=82.76 E-value=4.3 Score=36.77 Aligned_cols=36 Identities=11% Similarity=0.051 Sum_probs=29.2
Q ss_pred CCCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 68 TCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 68 ~~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
...+++|.|+|.|.+|..++..+.+.|++|++++.+
T Consensus 16 ~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 16 YFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 344678999999999999999999999999988543
No 382
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=82.75 E-value=1.7 Score=41.42 Aligned_cols=33 Identities=21% Similarity=0.249 Sum_probs=27.9
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999996 678999999999999999988543
No 383
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=82.69 E-value=2 Score=40.58 Aligned_cols=31 Identities=26% Similarity=0.254 Sum_probs=26.8
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
.|++||+|+ +.+|..+++.+.+.|++|+++.
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~ 57 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNY 57 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 568999986 6789999999999999998774
No 384
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=82.66 E-value=1 Score=40.29 Aligned_cols=34 Identities=15% Similarity=0.333 Sum_probs=29.0
Q ss_pred CccEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g-~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
..++|||+| +|.+|..+++.++..|.+|++++.+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~ 72 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS 72 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence 357899999 5899999999999999999888543
No 385
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=82.63 E-value=3.3 Score=43.46 Aligned_cols=87 Identities=13% Similarity=0.102 Sum_probs=57.1
Q ss_pred CccEEEEEcCcHHHHHHHHHH-HHcCCcEEEEecCCCCCCcc-----ccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009903 70 RQEKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALH-----VKLADESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa-~~~G~~vi~v~~~~~~~~~~-----~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 143 (523)
..|+++|.|.+.....+++.+ .++|.+++.+.......... ..+.++.+. ..|..++.+++++.+
T Consensus 279 ~GKrv~i~gd~~~~~~la~~L~~ElGm~vv~~gt~~~~~~~~~~~~~~~~~~~v~i---------~~D~~el~~~i~~~~ 349 (525)
T 3aek_B 279 TGKRVFIFGDGTHVIAAARIAAKEVGFEVVGMGCYNREMARPLRTAAAEYGLEALI---------TDDYLEVEKAIEAAA 349 (525)
T ss_dssp TTCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEESCGGGHHHHHHHHHHTTCCCEE---------CSCHHHHHHHHHHHC
T ss_pred CCCEEEEEcCchHHHHHHHHHHHHcCCeeEEEecCchhHHHHHHHHHHhcCCcEEE---------eCCHHHHHHHHhhcC
Confidence 358999999888899999999 89999998775322111100 112232332 236778888888889
Q ss_pred CCEEEeCCCcccccHHHHHHHHHcCCcee
Q 009903 144 CTMLHPGYGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 144 id~Vi~~~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
+|.++.+ ..-...++++|+|++
T Consensus 350 pDL~ig~-------~~~~~~a~~~giP~~ 371 (525)
T 3aek_B 350 PELILGT-------QMERNIAKKLGLPCA 371 (525)
T ss_dssp CSEEEEC-------HHHHHHHHHHTCCEE
T ss_pred CCEEEec-------chhHHHHHHcCCCEE
Confidence 9988842 223345567777754
No 386
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=82.54 E-value=1.8 Score=40.06 Aligned_cols=75 Identities=12% Similarity=0.120 Sum_probs=46.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccc-cc---c-C-eeEEcCCCCCCCCCCCHHHHHHHHHHc-
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL---A-D-ESVCIGEAPSSQSYLLIPNVLSAAISR- 142 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-~~---a-d-~~~~~~~~~~~~~~~~~~~l~~~~~~~- 142 (523)
.|++||+|+ +.+|..+++.+.+.|++|+++..+........ .+ . + ..+.+ |..+.+.+.+++++.
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVL-------NISDIESIQNFFAEIK 77 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEC-------CTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEe-------cCCCHHHHHHHHHHHH
Confidence 578999986 67899999999999999998854322111000 00 1 1 12222 355666665555442
Q ss_pred ----CCCEEEeCCC
Q 009903 143 ----GCTMLHPGYG 152 (523)
Q Consensus 143 ----~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 78 ~~~~~id~li~~Ag 91 (247)
T 3lyl_A 78 AENLAIDILVNNAG 91 (247)
T ss_dssp HTTCCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 6899886654
No 387
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=82.51 E-value=1.8 Score=41.01 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=27.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 578888886 67899999999999999988753
No 388
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=82.48 E-value=8.4 Score=36.82 Aligned_cols=35 Identities=9% Similarity=0.005 Sum_probs=29.7
Q ss_pred CCccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 69 ~~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
...|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 34688999996 678999999999999999998644
No 389
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=82.47 E-value=1.8 Score=41.70 Aligned_cols=33 Identities=6% Similarity=0.062 Sum_probs=28.2
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 26 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~ 59 (297)
T 1xhl_A 26 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN 59 (297)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999986 678999999999999999988543
No 390
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=82.44 E-value=1.5 Score=43.46 Aligned_cols=89 Identities=13% Similarity=0.135 Sum_probs=54.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
+.+|.|+|.|.+|...++++.+. |++++.+. +.+.. ....+++++ -+ ..+.+.++++ .+..+|+|+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~-d~~~~-~~~~~~~~~-g~------~~~~~~~~~l---~~~~~D~V~i 72 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCY-SRTED-KREKFGKRY-NC------AGDATMEALL---AREDVEMVII 72 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEE-CSSHH-HHHHHHHHH-TC------CCCSSHHHHH---HCSSCCEEEE
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEE-CCCHH-HHHHHHHHc-CC------CCcCCHHHHh---cCCCCCEEEE
Confidence 46899999999999999999988 88877664 32221 112222221 11 1255655554 3467999987
Q ss_pred CCCcccccHHHHHHHHHcCCcee
Q 009903 150 GYGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 150 ~~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
+... ......+..+.+.|.+++
T Consensus 73 ~tp~-~~h~~~~~~al~~gk~vl 94 (354)
T 3db2_A 73 TVPN-DKHAEVIEQCARSGKHIY 94 (354)
T ss_dssp CSCT-TSHHHHHHHHHHTTCEEE
T ss_pred eCCh-HHHHHHHHHHHHcCCEEE
Confidence 6532 123455666667787655
No 391
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=82.42 E-value=1.3 Score=45.17 Aligned_cols=34 Identities=6% Similarity=0.074 Sum_probs=29.8
Q ss_pred CccEEEEEcCcHHHHHHHHHHHH--cCCcEEEEecC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHE--MGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~--~G~~vi~v~~~ 103 (523)
|+++|+|+|+|..|...+..+++ .|++|++++..
T Consensus 1 M~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~ 36 (430)
T 3h28_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred CCCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCC
Confidence 56899999999999999999999 78999999654
No 392
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=82.39 E-value=2.1 Score=42.53 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=31.7
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID 105 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~ 105 (523)
+..+++|+|+|..+..+++-++.+||+|+++++.++
T Consensus 198 p~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~ 233 (362)
T 3on5_A 198 PKERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPN 233 (362)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCcc
Confidence 357899999999999999999999999999975443
No 393
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=82.32 E-value=0.78 Score=48.02 Aligned_cols=33 Identities=9% Similarity=0.148 Sum_probs=29.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
+++|+|+|+|.-|..+++.+++.+++|++|+.+
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCC
Confidence 579999999999999999999999999999654
No 394
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=82.30 E-value=2.2 Score=39.34 Aligned_cols=32 Identities=9% Similarity=0.009 Sum_probs=27.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCC-------cEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGI-------PCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~-------~vi~v~~ 102 (523)
.|+|||+|+ |.+|..+++.+.+.|+ +|++++.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r 41 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR 41 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeC
Confidence 478999996 6789999999999999 8888754
No 395
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=82.27 E-value=1.5 Score=41.09 Aligned_cols=32 Identities=13% Similarity=0.157 Sum_probs=27.9
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|+|||+|+ |.+|..+++.+.+.|++|++++.
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r 46 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCAR 46 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 478999986 67899999999999999998854
No 396
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=82.25 E-value=1.3 Score=47.10 Aligned_cols=76 Identities=14% Similarity=0.028 Sum_probs=49.8
Q ss_pred CCCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 68 TCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 68 ~~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
..+.++|+|+|.|..|..+++.+.+.|+++++++.+++........-+..+..+ +..+.+.+.+ +.-.+.+.+
T Consensus 124 ~~~~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~G------d~~~~~~L~~-a~i~~a~~v 196 (565)
T 4gx0_A 124 DDTRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYG------SPTDAHVLAG-LRVAAARSI 196 (565)
T ss_dssp TTCCSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEES------CTTCHHHHHH-TTGGGCSEE
T ss_pred cccCCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEe------CCCCHHHHHh-cCcccCCEE
Confidence 456789999999999999999999999999999655432211111102233333 3455555444 344567888
Q ss_pred EeC
Q 009903 148 HPG 150 (523)
Q Consensus 148 i~~ 150 (523)
+.+
T Consensus 197 i~t 199 (565)
T 4gx0_A 197 IAN 199 (565)
T ss_dssp EEC
T ss_pred EEe
Confidence 864
No 397
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=82.21 E-value=1.3 Score=43.19 Aligned_cols=33 Identities=21% Similarity=0.073 Sum_probs=28.8
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
|+++|+|+|+|.+|..++..+.+.|++|.++..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r 33 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTGHCVSVVSR 33 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEeC
Confidence 568999999999999999999999999999853
No 398
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=82.10 E-value=1.4 Score=40.29 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=28.5
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
++++|+|+|.|.+|..+++.+.+.|++|++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeC
Confidence 356899999999999999999999999988854
No 399
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=82.08 E-value=2.2 Score=40.92 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=28.1
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|+|||+|+ |.+|..+++.+.+.|++|++++.
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r 50 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASR 50 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 478999986 67899999999999999998854
No 400
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=82.07 E-value=2.3 Score=41.43 Aligned_cols=37 Identities=27% Similarity=0.347 Sum_probs=31.9
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDK 106 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~ 106 (523)
|.+||++.|....+...++++.+.|++++.|.+.++.
T Consensus 1 ~~mrivf~Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~ 37 (314)
T 3tqq_A 1 MSLKIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDR 37 (314)
T ss_dssp CCCEEEEEECSGGGHHHHHHHHHSSSEEEEEECCCC-
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCCC
Confidence 5679999999999999999999999999998765543
No 401
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=82.01 E-value=3.3 Score=39.22 Aligned_cols=80 Identities=9% Similarity=-0.003 Sum_probs=46.3
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccc-cc---cCeeEEcCCCCCCCCCCCHHHHHHHHHH-cCC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL---ADESVCIGEAPSSQSYLLIPNVLSAAIS-RGC 144 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-~~---ad~~~~~~~~~~~~~~~~~~~l~~~~~~-~~i 144 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+...... .+ ......+. .+..+..+.+.+++.+.+ .++
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~Dv~~~~~~~~~~~~~~~~g~i 110 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELA--GDLSEAGAGTDLIERAEAIAPV 110 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEE--CCTTSTTHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEE--ecCCCHHHHHHHHHHHHHhCCC
Confidence 478999986 67899999999999999999865443221111 00 11111111 122233344444444333 378
Q ss_pred CEEEeCCC
Q 009903 145 TMLHPGYG 152 (523)
Q Consensus 145 d~Vi~~~g 152 (523)
|.++-.-+
T Consensus 111 D~lvnnAg 118 (275)
T 4imr_A 111 DILVINAS 118 (275)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 98886544
No 402
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=81.88 E-value=2.7 Score=39.48 Aligned_cols=32 Identities=16% Similarity=0.002 Sum_probs=28.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEEC
Confidence 468999986 67899999999999999998854
No 403
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=81.86 E-value=1.3 Score=42.59 Aligned_cols=32 Identities=22% Similarity=0.232 Sum_probs=28.5
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
+++|+|+|.|.+|..++..+.+.|++|++++.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEEC
Confidence 46899999999999999999999999998853
No 404
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=81.83 E-value=3.1 Score=38.94 Aligned_cols=33 Identities=6% Similarity=-0.010 Sum_probs=28.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRN 40 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999986 678999999999999999988543
No 405
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=81.74 E-value=2.3 Score=40.14 Aligned_cols=78 Identities=19% Similarity=0.138 Sum_probs=46.7
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccCeeEEcCCCCCCCCCCCHHHHHHHHHH-----c
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----R 142 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~-----~ 142 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.+.+.... ...+......+. .|..+.+.+.+++++ .
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dv~d~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFS-----ANLSDRKSIKQLAEVAEREME 100 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEE-----CCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEE-----eecCCHHHHHHHHHHHHHHcC
Confidence 3578999986 678999999999999999988543221110 011111222221 135555555555443 2
Q ss_pred CCCEEEeCCC
Q 009903 143 GCTMLHPGYG 152 (523)
Q Consensus 143 ~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 101 ~iD~lvnnAg 110 (266)
T 3grp_A 101 GIDILVNNAG 110 (266)
T ss_dssp SCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999886544
No 406
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=81.73 E-value=2.3 Score=39.06 Aligned_cols=75 Identities=15% Similarity=0.105 Sum_probs=46.9
Q ss_pred ccEEEEE--cCcHHHHHHHHHHHHcCC--cEEEEecCCCCCCccccccCe----eEEcCCCCCCCCCCC----HHHHHHH
Q 009903 71 QEKILVA--NRGEIAVRVIRTAHEMGI--PCVAVYSTIDKDALHVKLADE----SVCIGEAPSSQSYLL----IPNVLSA 138 (523)
Q Consensus 71 ~k~ILi~--g~g~~~~~vi~aa~~~G~--~vi~v~~~~~~~~~~~~~ad~----~~~~~~~~~~~~~~~----~~~l~~~ 138 (523)
|+||+|+ |.|..+..+++++.+.++ +++++.++.+ .......|.+ .+.+++ .++.+ -+.+++.
T Consensus 1 m~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~-~~~~~~~A~~~gIp~~~~~~----~~~~~r~~~~~~~~~~ 75 (216)
T 2ywr_A 1 MLKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNP-KAYAIERCKKHNVECKVIQR----KEFPSKKEFEERMALE 75 (216)
T ss_dssp CEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCT-TCHHHHHHHHHTCCEEECCG----GGSSSHHHHHHHHHHH
T ss_pred CCEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCC-ChHHHHHHHHcCCCEEEeCc----ccccchhhhhHHHHHH
Confidence 3688888 888899999999998887 7776655532 2223333321 222221 11222 2567788
Q ss_pred HHHcCCCEEEeC
Q 009903 139 AISRGCTMLHPG 150 (523)
Q Consensus 139 ~~~~~id~Vi~~ 150 (523)
+++.++|.|+..
T Consensus 76 l~~~~~Dliv~a 87 (216)
T 2ywr_A 76 LKKKGVELVVLA 87 (216)
T ss_dssp HHHTTCCEEEES
T ss_pred HHhcCCCEEEEe
Confidence 888899987753
No 407
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=81.72 E-value=1.6 Score=43.88 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=30.2
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
..++|+|+|.|.+|..+++.|+.+|.+|++++.+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3689999999999999999999999998888543
No 408
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=81.66 E-value=9.2 Score=35.97 Aligned_cols=33 Identities=9% Similarity=-0.030 Sum_probs=28.7
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEec
Confidence 3578999996 67899999999999999999854
No 409
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=81.61 E-value=2.3 Score=40.21 Aligned_cols=31 Identities=23% Similarity=0.252 Sum_probs=27.3
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~ 49 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNY 49 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 578999986 5789999999999999999875
No 410
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=81.50 E-value=2.1 Score=40.04 Aligned_cols=33 Identities=15% Similarity=0.165 Sum_probs=28.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999986 678999999999999999998543
No 411
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=81.50 E-value=1.7 Score=42.69 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=50.2
Q ss_pred CCccEEEEEcCc-HHHHHHHHHHHHcCCcEEEEecCCCCCCccccc-cCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009903 69 CRQEKILVANRG-EIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (523)
Q Consensus 69 ~~~k~ILi~g~g-~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~ 146 (523)
...++|||+|+| .+|..+++.|+.+|.+|++++.+.+......++ ++..+... +....+.+.++....++|.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~------~~~~~~~~~~~~~~~g~Dv 216 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTS------TAPLYETVMELTNGIGADA 216 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETT------TSCHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCC------cccHHHHHHHHhCCCCCcE
Confidence 346799999986 899999999999999999886544433322333 34333221 1222445555554457999
Q ss_pred EEeCCC
Q 009903 147 LHPGYG 152 (523)
Q Consensus 147 Vi~~~g 152 (523)
|+-+.|
T Consensus 217 vid~~g 222 (340)
T 3gms_A 217 AIDSIG 222 (340)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 986654
No 412
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=81.50 E-value=2.2 Score=40.59 Aligned_cols=77 Identities=13% Similarity=0.089 Sum_probs=46.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-----C
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----G 143 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~ 143 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+.+.... ...+......+. .|..+.+.+.+++++. +
T Consensus 5 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dv~~~~~v~~~~~~~~~~~g~ 79 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVV-----GDVRSLQDQKRAAERCLAAFGK 79 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEE-----CCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEE-----cCCCCHHHHHHHHHHHHHhcCC
Confidence 578999986 678999999999999999998543221110 001111121111 1345555555554432 7
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.++-.-+
T Consensus 80 iD~lvnnAg 88 (281)
T 3zv4_A 80 IDTLIPNAG 88 (281)
T ss_dssp CCEEECCCC
T ss_pred CCEEEECCC
Confidence 898886544
No 413
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=81.47 E-value=1.5 Score=44.20 Aligned_cols=76 Identities=11% Similarity=-0.044 Sum_probs=47.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcC-CcEEEEecCCCCCCcc-ccc-------cCeeEEcCCCCCCCCCCCHHHHHHHHH
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMG-IPCVAVYSTIDKDALH-VKL-------ADESVCIGEAPSSQSYLLIPNVLSAAI 140 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G-~~vi~v~~~~~~~~~~-~~~-------ad~~~~~~~~~~~~~~~~~~~l~~~~~ 140 (523)
.|+|||+|+ |.+|..+++.+.+.| ++|++++......... ..+ ......+ ..+..+.+.+..+..
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~-----~~Dl~d~~~~~~~~~ 109 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTF-----ALDIGSIEYDAFIKA 109 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEE-----CCCTTSHHHHHHHHH
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEE-----EEeCCCHHHHHHHHH
Confidence 578999995 789999999999999 6888884322111000 000 0112211 124566666666666
Q ss_pred HcCCCEEEeCC
Q 009903 141 SRGCTMLHPGY 151 (523)
Q Consensus 141 ~~~id~Vi~~~ 151 (523)
..++|.|+-..
T Consensus 110 ~~~~D~Vih~A 120 (399)
T 3nzo_A 110 DGQYDYVLNLS 120 (399)
T ss_dssp CCCCSEEEECC
T ss_pred hCCCCEEEECC
Confidence 67899988543
No 414
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=81.32 E-value=4.3 Score=38.40 Aligned_cols=33 Identities=12% Similarity=0.176 Sum_probs=28.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS 60 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999986 578999999999999999988543
No 415
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=81.31 E-value=1.4 Score=45.28 Aligned_cols=35 Identities=6% Similarity=-0.008 Sum_probs=29.7
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHc--CCcEEEEecCC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEM--GIPCVAVYSTI 104 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~--G~~vi~v~~~~ 104 (523)
|.++|+|+|+|..|...+..|++. |++|++++...
T Consensus 1 M~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 37 (452)
T 3oc4_A 1 MSLKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA 37 (452)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 447999999999999999999999 99999996443
No 416
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=81.29 E-value=11 Score=35.48 Aligned_cols=33 Identities=6% Similarity=-0.054 Sum_probs=28.7
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 4578999986 67899999999999999999854
No 417
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=81.21 E-value=1.4 Score=43.32 Aligned_cols=141 Identities=12% Similarity=0.124 Sum_probs=74.0
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
|+.+|.|+|.|.+|...++++.+. +++++.+. +.++. ....+++..- + ...+.+.+++++ ...+|+|+
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~-d~~~~-~~~~~~~~~~-~-----~~~~~~~~~ll~---~~~~D~V~ 69 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMIDDAILYAIS-DVRED-RLREMKEKLG-V-----EKAYKDPHELIE---DPNVDAVL 69 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEE-CSCHH-HHHHHHHHHT-C-----SEEESSHHHHHH---CTTCCEEE
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEE-CCCHH-HHHHHHHHhC-C-----CceeCCHHHHhc---CCCCCEEE
Confidence 567999999999999999999886 77777653 32221 1112222110 0 001455555543 45799998
Q ss_pred eCCCcccccHHHHHHHHHcCCceeC-----CCHHHHHHhCCHHHHHHHHHHCCCCCCCCCC-ccCCCHHHHHHHHH--hc
Q 009903 149 PGYGFLAENAVFVEMCREHGINFIG-----PNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLAD--EL 220 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~g-----~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~-~~~~s~~e~~~~~~--~~ 220 (523)
.+... ......+..+.+.|.+++. .+.+.++ .+.+..++.|+..--.+. +.......+.+.++ .+
T Consensus 70 i~tp~-~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~------~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i 142 (344)
T 3ezy_A 70 VCSST-NTHSELVIACAKAKKHVFCEKPLSLNLADVD------RMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTI 142 (344)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEEESCSCSCHHHHH------HHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTT
T ss_pred EcCCC-cchHHHHHHHHhcCCeEEEECCCCCCHHHHH------HHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCC
Confidence 76532 1234555666677876552 2233222 344455666664322110 11122344555544 35
Q ss_pred CCcEEEEe
Q 009903 221 GFPVMIKA 228 (523)
Q Consensus 221 g~P~VvKP 228 (523)
|-+..+.-
T Consensus 143 G~i~~~~~ 150 (344)
T 3ezy_A 143 GKPHVLRI 150 (344)
T ss_dssp SSEEEEEE
T ss_pred CCeEEEEE
Confidence 65655554
No 418
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=81.16 E-value=2 Score=40.41 Aligned_cols=33 Identities=12% Similarity=0.135 Sum_probs=28.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999986 678999999999999999988543
No 419
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=81.16 E-value=2.3 Score=40.11 Aligned_cols=32 Identities=19% Similarity=0.371 Sum_probs=28.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|++||+|+ +.+|..+++.+.+.|++|+++..
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 478999986 67899999999999999998864
No 420
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=81.05 E-value=2.3 Score=42.94 Aligned_cols=34 Identities=26% Similarity=0.298 Sum_probs=30.2
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~ 104 (523)
..+|+|+|.|..|..+++.|+.+|.+|++++.+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999885444
No 421
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=81.03 E-value=2.5 Score=43.51 Aligned_cols=51 Identities=8% Similarity=-0.022 Sum_probs=38.0
Q ss_pred cccCCcccccCCCCCCCccCCCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCC
Q 009903 49 AGVGGKLKRRCGGGGALKVTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (523)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~ 104 (523)
|+.|..+.. -. ......+++|.|+|.|.+|..++..+.+.|++|++++.+.
T Consensus 37 w~~p~~~~~-~~----~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 37 WSLPNDRGD-HT----NSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CBCSTTSCB-TT----SCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccCCCCccc-cc----cCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 777755432 00 1233446899999999999999999999999999995443
No 422
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=80.96 E-value=1.4 Score=42.51 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=30.0
Q ss_pred CCccEEEEEc-CcHHHHHHHHHHHHcCCcEEEEe
Q 009903 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 69 ~~~k~ILi~g-~g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
+|+++|.|+| .|.+|..++..+.+.|++|++++
T Consensus 19 ~~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~ 52 (298)
T 2pv7_A 19 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILD 52 (298)
T ss_dssp TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEEC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEE
Confidence 3677899999 99999999999999999999884
No 423
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=80.92 E-value=1.5 Score=43.79 Aligned_cols=33 Identities=12% Similarity=0.206 Sum_probs=29.4
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.++|+|+|+|..|..+++.|+.+|.+|++++.+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 379999999999999999999999988888543
No 424
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=80.91 E-value=1.3 Score=42.40 Aligned_cols=32 Identities=13% Similarity=0.060 Sum_probs=29.3
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEE-Ee
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVA-VY 101 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~-v~ 101 (523)
.+++|+|+|+|..|...+..|++.|++|++ ++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e 35 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFE 35 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Confidence 357999999999999999999999999999 74
No 425
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=80.88 E-value=4.1 Score=41.91 Aligned_cols=96 Identities=9% Similarity=0.088 Sum_probs=57.7
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHc-CC---cEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHH-HHHHcCCC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEM-GI---PCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLS-AAISRGCT 145 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~-G~---~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~-~~~~~~id 145 (523)
.++|||+|.|..|..+++.+.+. ++ .+++++.+...........-....+. -+..+.+++++ ++++ + |
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~-----Vdadnv~~~l~aLl~~-~-D 85 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQ-----ITPQNYLEVIGSTLEE-N-D 85 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECC-----CCTTTHHHHTGGGCCT-T-C
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEe-----ccchhHHHHHHHHhcC-C-C
Confidence 56899999999999998777665 56 68888544332211111111222221 11344545443 5543 3 9
Q ss_pred EEEeCCCcccccHHHHHHHHHcCCceeCC
Q 009903 146 MLHPGYGFLAENAVFVEMCREHGINFIGP 174 (523)
Q Consensus 146 ~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~ 174 (523)
+|+-.. ....+..+.+.|.+.|+.++-.
T Consensus 86 vVIN~s-~~~~~l~Im~acleaGv~YlDT 113 (480)
T 2ph5_A 86 FLIDVS-IGISSLALIILCNQKGALYINA 113 (480)
T ss_dssp EEEECC-SSSCHHHHHHHHHHHTCEEEES
T ss_pred EEEECC-ccccCHHHHHHHHHcCCCEEEC
Confidence 988643 3334568889999999987743
No 426
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=80.87 E-value=1.3 Score=43.96 Aligned_cols=141 Identities=10% Similarity=0.017 Sum_probs=81.8
Q ss_pred ccEEEEEcCcHHHH-HHHHHHHHc-CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 71 QEKILVANRGEIAV-RVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~g~~~~-~vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
+.+|.|+|.|.+|. ..++++.+. |++++.+. +.+.. ....+++++ -+. .+.+.++++ .+..+|+|+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~-d~~~~-~~~~~a~~~-g~~------~~~~~~~ll---~~~~~D~V~ 94 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIA-SRRWD-RAKRFTERF-GGE------PVEGYPALL---ERDDVDAVY 94 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEE-ESSHH-HHHHHHHHH-CSE------EEESHHHHH---TCTTCSEEE
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEE-cCCHH-HHHHHHHHc-CCC------CcCCHHHHh---cCCCCCEEE
Confidence 45899999999998 688999888 78887664 22211 112222221 010 133455544 345799998
Q ss_pred eCCCcccccHHHHHHHHHcCCceeC-----CCHHHHHHhCCHHHHHHHHHHCCCCCCCCC-CccCCCHHHHHHHHH--hc
Q 009903 149 PGYGFLAENAVFVEMCREHGINFIG-----PNPDSIRIMGDKSTARETMKNAGVPTVPGS-DGLLQSTEEAVKLAD--EL 220 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~g-----~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~-~~~~~s~~e~~~~~~--~~ 220 (523)
.+... .....++..+.+.|.+++. .+.+.+ ..+.+.+++.|+..-..+ .+.......+.+.++ ++
T Consensus 95 i~tp~-~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea------~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i 167 (350)
T 3rc1_A 95 VPLPA-VLHAEWIDRALRAGKHVLAEKPLTTDRPQA------ERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVI 167 (350)
T ss_dssp ECCCG-GGHHHHHHHHHHTTCEEEEESSSCSSHHHH------HHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTT
T ss_pred ECCCc-HHHHHHHHHHHHCCCcEEEeCCCCCCHHHH------HHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCC
Confidence 76532 1235666677778887653 233333 235566778887643221 122334566777776 56
Q ss_pred CCcEEEEeCC
Q 009903 221 GFPVMIKATA 230 (523)
Q Consensus 221 g~P~VvKP~~ 230 (523)
|-+..+.-..
T Consensus 168 G~i~~v~~~~ 177 (350)
T 3rc1_A 168 GEIRSFAASF 177 (350)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 7776666543
No 427
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=80.84 E-value=1.7 Score=42.81 Aligned_cols=77 Identities=23% Similarity=0.216 Sum_probs=48.6
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccc-cCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
..++|||.|+ |.+|..+++.|+.+|.+|+++..+.+......++ ++..+.. .....+.+.++....++|.|
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~-------~~~~~~~v~~~~~~~g~Dvv 231 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPL-------EEGWAKAVREATGGAGVDMV 231 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEES-------STTHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecC-------chhHHHHHHHHhCCCCceEE
Confidence 4679999997 9999999999999999999886544332222222 3333321 11123344444444579999
Q ss_pred EeCCCc
Q 009903 148 HPGYGF 153 (523)
Q Consensus 148 i~~~g~ 153 (523)
+-+.+.
T Consensus 232 id~~g~ 237 (342)
T 4eye_A 232 VDPIGG 237 (342)
T ss_dssp EESCC-
T ss_pred EECCch
Confidence 976553
No 428
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=80.84 E-value=1.4 Score=45.38 Aligned_cols=34 Identities=15% Similarity=0.060 Sum_probs=30.1
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCC--cEEEEecC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGI--PCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~--~vi~v~~~ 103 (523)
|+++|+|||+|..|...+..|.+.|+ +|+++...
T Consensus 1 m~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~ 36 (477)
T 3nks_A 1 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESS 36 (477)
T ss_dssp -CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSS
T ss_pred CCceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCC
Confidence 56799999999999999999999999 99999543
No 429
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=80.83 E-value=1.5 Score=44.30 Aligned_cols=33 Identities=15% Similarity=0.032 Sum_probs=29.3
Q ss_pred ccEEEEEcCcHHHHHHHHHHHH---cCCcEEEEecC
Q 009903 71 QEKILVANRGEIAVRVIRTAHE---MGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~---~G~~vi~v~~~ 103 (523)
|++|+|+|+|..|..++..|++ .|++|++++..
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~ 36 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKS 36 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCC
Confidence 4689999999999999999999 89999999644
No 430
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=80.82 E-value=3.7 Score=40.63 Aligned_cols=90 Identities=12% Similarity=0.026 Sum_probs=53.5
Q ss_pred cEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 72 EKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 72 k~ILi~g~g~~~~~-vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
.+|.|+|.|.++.. +++++.+. |++++.+. +.++. ....+++++- ...-+.+.+++++ +..+|+|+.
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~-d~~~~-~~~~~a~~~~------~~~~~~~~~~ll~---~~~vD~V~i 74 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAAC-DSDLE-RARRVHRFIS------DIPVLDNVPAMLN---QVPLDAVVM 74 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEE-CSSHH-HHGGGGGTSC------SCCEESSHHHHHH---HSCCSEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEE-cCCHH-HHHHHHHhcC------CCcccCCHHHHhc---CCCCCEEEE
Confidence 58999999999875 78999887 78887664 32221 1222333210 0012456666554 467999987
Q ss_pred CCCcccccHHHHHHHHHcCCceeC
Q 009903 150 GYGFLAENAVFVEMCREHGINFIG 173 (523)
Q Consensus 150 ~~g~~~e~~~~a~~~~~~gl~~~g 173 (523)
+... .....++..+.+.|.+++.
T Consensus 75 ~tp~-~~H~~~~~~al~aGkhVl~ 97 (359)
T 3m2t_A 75 AGPP-QLHFEMGLLAMSKGVNVFV 97 (359)
T ss_dssp CSCH-HHHHHHHHHHHHTTCEEEE
T ss_pred cCCc-HHHHHHHHHHHHCCCeEEE
Confidence 6521 1224555566677877653
No 431
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=80.70 E-value=4.9 Score=42.22 Aligned_cols=31 Identities=6% Similarity=0.079 Sum_probs=27.8
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
.|+++|.+.+.....+++.+.++|.+++.+.
T Consensus 335 GKrv~i~~~~~~~~~l~~~l~ElGm~vv~~~ 365 (533)
T 1mio_A 335 GKTACLYVGGSRSHTYMNMLKSFGVDSLVAG 365 (533)
T ss_dssp TCEEEEEESSSHHHHHHHHHHHHTCEEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHCCCEEEEEE
Confidence 5789999888889999999999999998885
No 432
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=80.64 E-value=1.1 Score=43.65 Aligned_cols=79 Identities=22% Similarity=0.209 Sum_probs=50.4
Q ss_pred CCccEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccc-cCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009903 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (523)
Q Consensus 69 ~~~k~ILi~g-~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~ 146 (523)
...++|||.| +|..|..+++.|+.+|.+|++++.+........++ ++..+... +....+.+.++....++|.
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~------~~~~~~~~~~~~~~~g~Dv 212 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYS------HEDVAKRVLELTDGKKCPV 212 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETT------TSCHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCC------CccHHHHHHHHhCCCCceE
Confidence 3467899999 69999999999999999998886433322222222 34444321 1222445555554467999
Q ss_pred EEeCCCc
Q 009903 147 LHPGYGF 153 (523)
Q Consensus 147 Vi~~~g~ 153 (523)
|+-+.+.
T Consensus 213 vid~~g~ 219 (325)
T 3jyn_A 213 VYDGVGQ 219 (325)
T ss_dssp EEESSCG
T ss_pred EEECCCh
Confidence 9976653
No 433
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=80.61 E-value=1.1 Score=42.47 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=28.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|++||.|+ +.+|..+++.+.+.|++|++++.
T Consensus 20 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 20 GKRALITGATKGIGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 578999986 67899999999999999998854
No 434
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=80.55 E-value=1.1 Score=43.13 Aligned_cols=34 Identities=3% Similarity=-0.007 Sum_probs=29.2
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
|+++|+|+|+|.+|..++..+.+.|++|.++..+
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 5678999999999999999999999999998644
No 435
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=80.46 E-value=1.3 Score=44.08 Aligned_cols=73 Identities=12% Similarity=0.078 Sum_probs=47.9
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccc-cc-cCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~-~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
...+|||+|+|..|..+++.|+.+|.+|++++.+.+...... .+ ++..+. +.+.+.+.++. .++|.|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~---------~~~~~~~~~~~--~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLV---------SRDQEQMQAAA--GTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEE---------TTCHHHHHHTT--TCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEe---------ccCHHHHHHhh--CCCCEE
Confidence 457999999999999999999999999888864433222211 22 344332 33444444433 378999
Q ss_pred EeCCCc
Q 009903 148 HPGYGF 153 (523)
Q Consensus 148 i~~~g~ 153 (523)
+-+.+.
T Consensus 256 id~~g~ 261 (366)
T 1yqd_A 256 IDTVSA 261 (366)
T ss_dssp EECCSS
T ss_pred EECCCc
Confidence 977653
No 436
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=80.39 E-value=3.9 Score=38.25 Aligned_cols=31 Identities=23% Similarity=0.263 Sum_probs=27.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
.|++||+|+ +.+|..+++.+.+.|++|+++.
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~ 39 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTY 39 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 578999996 6789999999999999999884
No 437
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=80.38 E-value=5.2 Score=38.41 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=31.1
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~ 104 (523)
..++|.|+|-|.+|..+++.++..|++|++++.+.
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~ 155 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSS 155 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSC
T ss_pred ecchheeeccCchhHHHHHHHHhhCcEEEEEeccc
Confidence 35899999999999999999999999999985443
No 438
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=80.38 E-value=1.7 Score=40.09 Aligned_cols=30 Identities=17% Similarity=0.131 Sum_probs=26.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAV 100 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v 100 (523)
+|+|||+|+ |.+|..+++.+.+.|++|+++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~ 31 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIH 31 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 368999986 678999999999999999887
No 439
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=80.37 E-value=3 Score=44.24 Aligned_cols=32 Identities=19% Similarity=0.347 Sum_probs=28.0
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
...+|+|+|.|..|..+++.+...|+.-+.+.
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLv 356 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFV 356 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 35799999999999999999999999766554
No 440
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=80.37 E-value=1.9 Score=43.30 Aligned_cols=33 Identities=18% Similarity=0.222 Sum_probs=29.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
..+|+|+|+|..|..++..|.+.|++|++++..
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 468999999999999999999999999999543
No 441
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=80.35 E-value=1.7 Score=43.94 Aligned_cols=79 Identities=14% Similarity=0.196 Sum_probs=50.5
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCccccc-cCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~-~vi~v~~~~~~~~~~~~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~ 146 (523)
....+|||.|+|..|..+++.|+.+|. +|++++.+........++ +|..+.. .+....+.+.++....++|.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~------~~~~~~~~i~~~t~g~g~D~ 285 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDP------TKENFVEAVLDYTNGLGAKL 285 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECT------TTSCHHHHHHHHTTTCCCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcC------CCCCHHHHHHHHhCCCCCCE
Confidence 346799999999999999999999999 777774333222222223 3443321 11223455656555568999
Q ss_pred EEeCCCc
Q 009903 147 LHPGYGF 153 (523)
Q Consensus 147 Vi~~~g~ 153 (523)
|+-+.|.
T Consensus 286 vid~~g~ 292 (404)
T 3ip1_A 286 FLEATGV 292 (404)
T ss_dssp EEECSSC
T ss_pred EEECCCC
Confidence 9976653
No 442
>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A*
Probab=80.31 E-value=1.2 Score=47.55 Aligned_cols=118 Identities=14% Similarity=0.112 Sum_probs=70.6
Q ss_pred HHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCC---CCCCccCCCHHHHHHHHHhcCCcEEEEeCCCCCCC
Q 009903 159 VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTV---PGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGR 235 (523)
Q Consensus 159 ~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p---~~~~~~~~s~~e~~~~~~~~g~P~VvKP~~g~gs~ 235 (523)
.+.+++++.++.++.|....+ ..||..+.-+.+-+- ..| ++ ....+.+ + ..- .+|+||..|..|.
T Consensus 474 ~ll~~l~~~~v~iieP~~~~l--lsNKailalLw~l~p-~hp~LLpT--~f~~~~~-l----~~~--~yV~KPi~gReG~ 541 (619)
T 2io8_A 474 RLIDVLLRPEVLVFEPLWTVI--PGNKAILPILWSLFP-HHRYLLDT--DFTVNDE-L----VKT--GYAVKPIAGRCGS 541 (619)
T ss_dssp CHHHHHTCTTCEEESCGGGGT--TTSTTHHHHHHHHST-TCTTCCCE--ESSCCHH-H----HHH--CEEEEETTCCTTT
T ss_pred HHHHHHHhCCCEEECHHHHHH--hhhHHHHHHHHHhCC-CCCCCCCe--eecCCcc-c----ccC--CEEEccCCCCCCC
Confidence 466777777899886544433 999999998877541 133 44 2223332 2 122 4899999999999
Q ss_pred ceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEeeccCCC----cEEEEEEEEeCCCcEEEEeee
Q 009903 236 GMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNP----RHIEFQVLADKYGNVVHFGER 296 (523)
Q Consensus 236 Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEefI~G~----~e~sv~v~~d~~g~v~~~~~~ 296 (523)
||.+++..++.. + .....++...+|.|+|++=+ ..+.+-++.- .|+...+..|
T Consensus 542 nV~i~~~~~~~~---~----~~~~~y~~~~~IyQe~~~lp~~d~~~~~iG~f~v-gg~~aG~~~R 598 (619)
T 2io8_A 542 NIDLVSHHEEVL---D----KTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTV-GGNYGGTCLR 598 (619)
T ss_dssp TCEEECTTSCEE---E----ECCCTTTTSCEEEEECCCCCEETTEEEEEEEEEE-TTEEEEEEEE
T ss_pred CEEEEeCCChhH---h----hccccccCCCeEEEEecCCCCcCCcceEEEEEEE-CCEEEEEEEe
Confidence 999987522210 0 00112345789999999851 2333444443 3355555444
No 443
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=80.24 E-value=1.9 Score=43.15 Aligned_cols=32 Identities=9% Similarity=0.098 Sum_probs=29.3
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
..+|+|+|+|..|..++..|++.|++|.+++.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEec
Confidence 46899999999999999999999999999953
No 444
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=80.20 E-value=1.4 Score=43.96 Aligned_cols=32 Identities=16% Similarity=0.233 Sum_probs=29.1
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
|..+|+|+|+|..|..++..|.+.|++|++++
T Consensus 1 m~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E 32 (394)
T 1k0i_A 1 MKTQVAIIGAGPSGLLLGQLLHKAGIDNVILE 32 (394)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCccEEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 34579999999999999999999999999995
No 445
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=80.17 E-value=1.5 Score=43.55 Aligned_cols=78 Identities=18% Similarity=0.198 Sum_probs=51.2
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccc-cCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
....+|||.|+|..|..+++.|+.+|.+|++++.+.+......++ ++..+. . +.....+.+.++....++|.|
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~-~-----~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGIN-R-----LEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEE-T-----TTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEc-C-----CcccHHHHHHHHhCCCCceEE
Confidence 346799999999999999999999999999886443322222222 344442 1 112224556666555689999
Q ss_pred EeCCC
Q 009903 148 HPGYG 152 (523)
Q Consensus 148 i~~~g 152 (523)
+-+.+
T Consensus 262 id~~g 266 (363)
T 3uog_A 262 LEIAG 266 (363)
T ss_dssp EEETT
T ss_pred EECCC
Confidence 87655
No 446
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=80.14 E-value=2.4 Score=41.19 Aligned_cols=33 Identities=15% Similarity=0.072 Sum_probs=28.3
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
..|++||+|+ +.+|..+++.+.+.|++|++++.
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3578999986 67899999999999999999854
No 447
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=79.95 E-value=1.8 Score=45.14 Aligned_cols=38 Identities=11% Similarity=0.177 Sum_probs=32.6
Q ss_pred cCCCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCC
Q 009903 67 VTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (523)
Q Consensus 67 ~~~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~ 104 (523)
..++...|+|+|+|..|..++..|.+.|++|++++...
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 44 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLV 44 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 45566789999999999999999999999999996543
No 448
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=79.91 E-value=2.6 Score=39.46 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=28.2
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999986 678999999999999999998543
No 449
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=79.88 E-value=1.8 Score=41.92 Aligned_cols=88 Identities=14% Similarity=0.155 Sum_probs=53.4
Q ss_pred ccEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 71 QEKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~-vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
+.+|.|+|.|.+|.. .++.+.+. |++++.+. +.+.. ....+++++- + ..+.+.+++++ .+|+|+
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~-d~~~~-~~~~~a~~~~-~------~~~~~~~~ll~-----~~D~V~ 71 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAF-TPNKV-KREKICSDYR-I------MPFDSIESLAK-----KCDCIF 71 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEE-CSCHH-HHHHHHHHHT-C------CBCSCHHHHHT-----TCSEEE
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEE-CCCHH-HHHHHHHHcC-C------CCcCCHHHHHh-----cCCEEE
Confidence 468999999999986 88888874 78887654 32221 1122222211 1 11567777765 699998
Q ss_pred eCCCcccccHHHHHHHHHcCCceeC
Q 009903 149 PGYGFLAENAVFVEMCREHGINFIG 173 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~g 173 (523)
.+.... ....++..+.+.|.+++.
T Consensus 72 i~tp~~-~h~~~~~~al~~gk~vl~ 95 (308)
T 3uuw_A 72 LHSSTE-THYEIIKILLNLGVHVYV 95 (308)
T ss_dssp ECCCGG-GHHHHHHHHHHTTCEEEE
T ss_pred EeCCcH-hHHHHHHHHHHCCCcEEE
Confidence 765321 234555666677776653
No 450
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=79.86 E-value=3.1 Score=38.76 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=28.1
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.
T Consensus 14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r 46 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYR 46 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 478999986 67899999999999999999864
No 451
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=79.80 E-value=2.3 Score=40.51 Aligned_cols=32 Identities=13% Similarity=0.032 Sum_probs=27.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r 40 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTAR 40 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 578999986 67899999999999999888743
No 452
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=79.75 E-value=5.7 Score=39.11 Aligned_cols=141 Identities=11% Similarity=0.052 Sum_probs=74.5
Q ss_pred ccEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 71 QEKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~-vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
+.+|.|+|.|.+|.. .++.+++. +++++.+. +.++......+. ...-+.+.+++++ ...+|+|+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~-d~~~~~~~~~~~----------~~~~~~~~~~ll~---~~~vD~V~ 72 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVS-SSDASKVHADWP----------AIPVVSDPQMLFN---DPSIDLIV 72 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEE-CSCHHHHHTTCS----------SCCEESCHHHHHH---CSSCCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEE-CCCHHHHHhhCC----------CCceECCHHHHhc---CCCCCEEE
Confidence 358999999999986 78888877 78887664 333221111110 1112456666654 45799998
Q ss_pred eCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCC-ccCCCHHHHHHHHH--hcCCcEE
Q 009903 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLAD--ELGFPVM 225 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~-~~~~s~~e~~~~~~--~~g~P~V 225 (523)
.+... .....++..+.+.|.+++.-.|-+. ...+=..+.+.+++.|+..--.+. +.......+.+.++ .+|-+..
T Consensus 73 i~tp~-~~H~~~~~~al~aGkhV~~EKPla~-~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~ 150 (352)
T 3kux_A 73 IPTPN-DTHFPLAQSALAAGKHVVVDKPFTV-TLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAEGSLGNVVY 150 (352)
T ss_dssp ECSCT-TTHHHHHHHHHHTTCEEEECSSCCS-CHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTTCSEEE
T ss_pred EeCCh-HHHHHHHHHHHHCCCcEEEECCCcC-CHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHHhcCCCCceEE
Confidence 76532 1235666677778887663222111 011112445566777765322210 11112344555544 4555555
Q ss_pred EE
Q 009903 226 IK 227 (523)
Q Consensus 226 vK 227 (523)
+.
T Consensus 151 ~~ 152 (352)
T 3kux_A 151 FE 152 (352)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 453
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=79.75 E-value=3.1 Score=38.90 Aligned_cols=32 Identities=13% Similarity=0.060 Sum_probs=27.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.
T Consensus 4 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 36 (260)
T 1x1t_A 4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGF 36 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeC
Confidence 478999986 67899999999999999998853
No 454
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=79.75 E-value=2 Score=40.31 Aligned_cols=30 Identities=17% Similarity=0.073 Sum_probs=26.6
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAV 100 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v 100 (523)
.|++||+|+ +.+|..+++.+.+.|++|+++
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~ 34 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAENGYNIVIN 34 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEE
Confidence 478999986 678999999999999999886
No 455
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=79.63 E-value=1.9 Score=41.83 Aligned_cols=33 Identities=9% Similarity=-0.012 Sum_probs=29.9
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
+++|.|+|.|.+|..+++.+.+.|++|++++.+
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 578999999999999999999999999988543
No 456
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=79.63 E-value=3.1 Score=38.87 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=28.3
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 45 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLK 45 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999986 678999999999999999988543
No 457
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=79.57 E-value=2.1 Score=44.68 Aligned_cols=38 Identities=8% Similarity=0.094 Sum_probs=31.6
Q ss_pred cCCCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCC
Q 009903 67 VTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (523)
Q Consensus 67 ~~~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~ 104 (523)
.+.+...|+|+|+|..|..++..|.+.|++|++++...
T Consensus 8 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 45 (499)
T 2qa2_A 8 HHRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLP 45 (499)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34567789999999999999999999999999996543
No 458
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=79.51 E-value=2.1 Score=42.09 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=27.7
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcC-CcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMG-IPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G-~~vi~v~~~ 103 (523)
.|+|||+|+ |.+|..+++.+.+.| ++|+++...
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 368999997 889999999999999 999988643
No 459
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=79.48 E-value=2.9 Score=39.75 Aligned_cols=75 Identities=9% Similarity=0.016 Sum_probs=46.0
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccc---cCe--eEEcCCCCCCCCCCCHHHHHHHHHH--
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKL---ADE--SVCIGEAPSSQSYLLIPNVLSAAIS-- 141 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~---ad~--~~~~~~~~~~~~~~~~~~l~~~~~~-- 141 (523)
.|+|||+|+ |.+|..+++.+.+.|++|+++..+.+.... ...+ ... .+.+ |..+.+.+.+++++
T Consensus 44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-------Dl~d~~~v~~~~~~~~ 116 (285)
T 2c07_A 44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG-------DVSKKEEISEVINKIL 116 (285)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEEC-------CTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEEC-------CCCCHHHHHHHHHHHH
Confidence 578999986 678999999999999999987532211100 0000 111 2222 35566666655543
Q ss_pred ---cCCCEEEeCCC
Q 009903 142 ---RGCTMLHPGYG 152 (523)
Q Consensus 142 ---~~id~Vi~~~g 152 (523)
.++|.|+-..+
T Consensus 117 ~~~~~id~li~~Ag 130 (285)
T 2c07_A 117 TEHKNVDILVNNAG 130 (285)
T ss_dssp HHCSCCCEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 36899886644
No 460
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=79.46 E-value=2.8 Score=39.02 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=27.5
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
..|+|||+|+ +.+|..+++.+.+.|++|++++
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~ 44 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGC 44 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 3688999986 6789999999999999998875
No 461
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=79.38 E-value=4 Score=37.88 Aligned_cols=33 Identities=12% Similarity=0.224 Sum_probs=27.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCc-EEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIP-CVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~-vi~v~~~ 103 (523)
.|++||+|+ |.+|..+++.+.+.|++ |++++.+
T Consensus 5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~ 39 (254)
T 1sby_A 5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRV 39 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecC
Confidence 478999986 67899999999999998 7777543
No 462
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=79.36 E-value=9.5 Score=36.70 Aligned_cols=104 Identities=16% Similarity=0.089 Sum_probs=59.2
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEE-EEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcC-CCEE
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCV-AVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRG-CTML 147 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi-~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~-id~V 147 (523)
..+++|+|. |..|..+++.+.+.|++++ .+ ++... ......... |.+.+++. ++.+ +|++
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~V--nP~~~--g~~i~G~~v----------y~sl~el~---~~~~~~Dva 75 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTKVVAGV--TPGKG--GSEVHGVPV----------YDSVKEAL---AEHPEINTS 75 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE--CTTCT--TCEETTEEE----------ESSHHHHH---HHCTTCCEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCcEEEEe--CCCCC--CceECCEee----------eCCHHHHh---hcCCCCCEE
Confidence 456888897 7789999999999999833 34 33221 111212222 34444443 3334 8887
Q ss_pred EeCCCcccccHHHHHHHHHcCCc-ee-CC---CHHHHHHhCCHHHHHHHHHHCCCC
Q 009903 148 HPGYGFLAENAVFVEMCREHGIN-FI-GP---NPDSIRIMGDKSTARETMKNAGVP 198 (523)
Q Consensus 148 i~~~g~~~e~~~~a~~~~~~gl~-~~-g~---~~~~~~~~~dK~~~r~~l~~~Gip 198 (523)
+..... .......+.+.+.|++ ++ .+ +.+ +...+.+.+++.|+.
T Consensus 76 Ii~vp~-~~~~~~v~ea~~~Gi~~vVi~t~G~~~~------~~~~l~~~A~~~gi~ 124 (297)
T 2yv2_A 76 IVFVPA-PFAPDAVYEAVDAGIRLVVVITEGIPVH------DTMRFVNYARQKGAT 124 (297)
T ss_dssp EECCCG-GGHHHHHHHHHHTTCSEEEECCCCCCHH------HHHHHHHHHHHHTCE
T ss_pred EEecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHH------HHHHHHHHHHHcCCE
Confidence 754321 1224666777778887 33 22 221 245667777788874
No 463
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=79.36 E-value=4 Score=41.98 Aligned_cols=87 Identities=14% Similarity=0.073 Sum_probs=56.6
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCcccc-------c--cCeeEEcCCCCCCCCCCCHHHHHHHHHH
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-------L--ADESVCIGEAPSSQSYLLIPNVLSAAIS 141 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~-------~--ad~~~~~~~~~~~~~~~~~~~l~~~~~~ 141 (523)
.|+++|.|.+.....+++.+.++|.+++.+............ . .+..+.. ..|...+.+++++
T Consensus 312 gkrv~i~~~~~~~~~l~~~L~elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~--------~~d~~~l~~~i~~ 383 (458)
T 1mio_B 312 GKKVALLGDPDEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKV--------EGDFFDVHQWIKN 383 (458)
T ss_dssp TCEEEEEECHHHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEE--------SCBHHHHHHHHHH
T ss_pred CCEEEEEcCchHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEE--------CCCHHHHHHHHHh
Confidence 589999999899999999999999999887544321110000 1 1112222 2477788888888
Q ss_pred cCCCEEEeCCCcccccHHHHHHHHHcCCcee
Q 009903 142 RGCTMLHPGYGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 142 ~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
.++|.++.+.. + ..++++.|+|++
T Consensus 384 ~~pDl~ig~~~---~----~~~a~k~gip~~ 407 (458)
T 1mio_B 384 EGVDLLISNTY---G----KFIAREENIPFV 407 (458)
T ss_dssp SCCSEEEESGG---G----HHHHHHHTCCEE
T ss_pred cCCCEEEeCcc---h----HHHHHHcCCCEE
Confidence 89998885431 1 234456677654
No 464
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=79.35 E-value=1.9 Score=42.95 Aligned_cols=147 Identities=11% Similarity=-0.009 Sum_probs=73.6
Q ss_pred CCCcc-EEEEEcCcHHHHHHHHHHHHc--------CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHH
Q 009903 68 TCRQE-KILVANRGEIAVRVIRTAHEM--------GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSA 138 (523)
Q Consensus 68 ~~~~k-~ILi~g~g~~~~~vi~aa~~~--------G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~ 138 (523)
+.|+| +|.|+|.|.+|..-+++++++ +.+++.+. +.+... ...+++++= + ..-|.|.+++++
T Consensus 21 ~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~-d~~~~~-a~~~a~~~g-~-----~~~y~d~~ell~- 91 (393)
T 4fb5_A 21 QSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLA-EANAGL-AEARAGEFG-F-----EKATADWRALIA- 91 (393)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEE-CC--TT-HHHHHHHHT-C-----SEEESCHHHHHH-
T ss_pred cCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEE-CCCHHH-HHHHHHHhC-C-----CeecCCHHHHhc-
Confidence 33444 899999999987766666553 56777775 333221 222332210 0 011456666554
Q ss_pred HHHcCCCEEEeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCCCCCCCC-ccCCCHHHHHHHH
Q 009903 139 AISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLA 217 (523)
Q Consensus 139 ~~~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~-~~~~s~~e~~~~~ 217 (523)
+..+|+|+.+.-. .....++..+.+.|.+++.--|-+. ...+=..+.+..++.|+..--.+. +.......+.+.+
T Consensus 92 --~~~iDaV~IatP~-~~H~~~a~~al~aGkhVl~EKPla~-~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i 167 (393)
T 4fb5_A 92 --DPEVDVVSVTTPN-QFHAEMAIAALEAGKHVWCEKPMAP-AYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLV 167 (393)
T ss_dssp --CTTCCEEEECSCG-GGHHHHHHHHHHTTCEEEECSCSCS-SHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHH
T ss_pred --CCCCcEEEECCCh-HHHHHHHHHHHhcCCeEEEccCCcc-cHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHH
Confidence 4679999876521 1235667777788887663222111 111223344556667765432211 1111233444444
Q ss_pred H--hcCCcEEEE
Q 009903 218 D--ELGFPVMIK 227 (523)
Q Consensus 218 ~--~~g~P~VvK 227 (523)
+ .+|-+..+.
T Consensus 168 ~~G~iG~i~~v~ 179 (393)
T 4fb5_A 168 GDGVIGRVNHVR 179 (393)
T ss_dssp HTTTTCSEEEEE
T ss_pred HcCCCcccccee
Confidence 4 355555444
No 465
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=79.34 E-value=1.2 Score=40.97 Aligned_cols=30 Identities=13% Similarity=0.225 Sum_probs=27.7
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEE
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAV 100 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v 100 (523)
|++|.|+|.|.+|..+++.+.+.|++|+++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v 52 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIA 52 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEE
Confidence 568999999999999999999999999883
No 466
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=79.33 E-value=1.9 Score=40.18 Aligned_cols=76 Identities=13% Similarity=0.034 Sum_probs=47.1
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc-----CC
Q 009903 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----GC 144 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~i 144 (523)
|++||+|+ +.+|..+++.+.+.|++|++++.+.+.... ...+......+. .|..+.+.+.+++++. ++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dv~~~~~v~~~~~~~~~~~g~i 75 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQ-----LDVRNRAAIEEMLASLPAEWCNI 75 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEE-----CCTTCHHHHHHHHHTSCTTTCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEE-----cCCCCHHHHHHHHHHHHHhCCCC
Confidence 57899986 678999999999999999988543221100 001111121111 2366777777776643 68
Q ss_pred CEEEeCCC
Q 009903 145 TMLHPGYG 152 (523)
Q Consensus 145 d~Vi~~~g 152 (523)
|.++-.-|
T Consensus 76 D~lvnnAg 83 (248)
T 3asu_A 76 DILVNNAG 83 (248)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 98886544
No 467
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=79.31 E-value=0.94 Score=44.49 Aligned_cols=91 Identities=14% Similarity=0.120 Sum_probs=54.0
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcC---CcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMG---IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G---~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~ 146 (523)
|+.+|.|+|.|.+|...++++++.+ ++++.+. +.+.. ....+++++- +. .-+.+.++++ .+..+|+
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~-d~~~~-~a~~~a~~~~-~~-----~~~~~~~~ll---~~~~vD~ 69 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVA-ARDLS-RAKEFAQKHD-IP-----KAYGSYEELA---KDPNVEV 69 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEE-CSSHH-HHHHHHHHHT-CS-----CEESSHHHHH---HCTTCCE
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEE-cCCHH-HHHHHHHHcC-CC-----cccCCHHHHh---cCCCCCE
Confidence 5679999999999999999998874 4566654 22211 1222222210 00 1145555554 3457999
Q ss_pred EEeCCCcccccHHHHHHHHHcCCcee
Q 009903 147 LHPGYGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 147 Vi~~~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
|+.+... .....++..+.+.|.+++
T Consensus 70 V~i~tp~-~~H~~~~~~al~~GkhVl 94 (334)
T 3ohs_X 70 AYVGTQH-PQHKAAVMLCLAAGKAVL 94 (334)
T ss_dssp EEECCCG-GGHHHHHHHHHHTTCEEE
T ss_pred EEECCCc-HHHHHHHHHHHhcCCEEE
Confidence 9876522 123566666777787765
No 468
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=79.24 E-value=2.4 Score=39.28 Aligned_cols=32 Identities=19% Similarity=0.198 Sum_probs=27.7
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|++||+|+ |.+|..+++.+.+.|++|+++..
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 4 GKVALVTGASRGIGRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 478999985 67899999999999999998853
No 469
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=79.12 E-value=2.9 Score=41.17 Aligned_cols=75 Identities=9% Similarity=0.050 Sum_probs=48.5
Q ss_pred cEEEEE-cCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccc-cCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009903 72 EKILVA-NRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (523)
Q Consensus 72 k~ILi~-g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi~ 149 (523)
++|||. |+|..|..+++.|+.+|.+|++++.+.+......++ ++..+... +....+.+.++....++|.|+-
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~------~~~~~~~v~~~~~~~g~D~vid 239 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEK------APDFEATLREVMKAEQPRIFLD 239 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETT------STTHHHHHHHHHHHHCCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECC------cHHHHHHHHHHhcCCCCcEEEE
Confidence 577776 678999999999999999999886443322222222 34444321 1223455666666678999997
Q ss_pred CCC
Q 009903 150 GYG 152 (523)
Q Consensus 150 ~~g 152 (523)
+.+
T Consensus 240 ~~g 242 (349)
T 3pi7_A 240 AVT 242 (349)
T ss_dssp SSC
T ss_pred CCC
Confidence 654
No 470
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=79.10 E-value=1.8 Score=44.87 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=29.0
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.|...|+|+|+|..|...+..|.+.|++|.+++.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk 56 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEK 56 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEec
Confidence 3446899999999999999999999999999964
No 471
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=79.07 E-value=1.9 Score=40.20 Aligned_cols=32 Identities=13% Similarity=0.143 Sum_probs=29.1
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCC----cEEEEe
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGI----PCVAVY 101 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~----~vi~v~ 101 (523)
|+++|.|+|.|.+|..+++.+.+.|+ +|++++
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~ 36 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSD 36 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEEC
T ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEe
Confidence 56789999999999999999999998 888874
No 472
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=79.06 E-value=3.9 Score=38.62 Aligned_cols=33 Identities=12% Similarity=0.162 Sum_probs=28.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++.+
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 54 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN 54 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999986 678999999999999999988543
No 473
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=79.02 E-value=8.5 Score=37.90 Aligned_cols=102 Identities=9% Similarity=-0.045 Sum_probs=50.3
Q ss_pred CCccEEEEEcC------cH---HHHHHHHHHHHcCCcEEEEecCCCCCC-ccc-cccCeeEEcCCCCCCC-CCC---CHH
Q 009903 69 CRQEKILVANR------GE---IAVRVIRTAHEMGIPCVAVYSTIDKDA-LHV-KLADESVCIGEAPSSQ-SYL---LIP 133 (523)
Q Consensus 69 ~~~k~ILi~g~------g~---~~~~vi~aa~~~G~~vi~v~~~~~~~~-~~~-~~ad~~~~~~~~~~~~-~~~---~~~ 133 (523)
.++||||++.. |. ....+++++.+.|++|.++........ ... ......+.+....... -.. ...
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPATHR 97 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCHHHHH
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccHHHHH
Confidence 34567888863 22 346789999999999999975543220 000 0000111111000000 011 125
Q ss_pred HHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHcCCcee
Q 009903 134 NVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFI 172 (523)
Q Consensus 134 ~l~~~~~~~~id~Vi~~~g~~~e~~~~a~~~~~~gl~~~ 172 (523)
.+.+++++.++|.|+....... . ....++...+++++
T Consensus 98 ~l~~~l~~~~~Dii~~~~~~~~-~-~~~~~~~~~~~~~i 134 (406)
T 2gek_A 98 KVKKWIAEGDFDVLHIHEPNAP-S-LSMLALQAAEGPIV 134 (406)
T ss_dssp HHHHHHHHHCCSEEEEECCCSS-S-HHHHHHHHEESSEE
T ss_pred HHHHHHHhcCCCEEEECCccch-H-HHHHHHHhcCCCEE
Confidence 6778888889999987543221 1 12233444566654
No 474
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=79.01 E-value=6 Score=39.33 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=24.9
Q ss_pred ccEEEEEcCcHH-----HHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~g~~-----~~~vi~aa~~~G~~vi~v~~ 102 (523)
+||||++..+.. ...+++++++.|++|.++..
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~ 56 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATG 56 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEcc
Confidence 467888875443 35789999999999999964
No 475
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=78.98 E-value=1.4 Score=42.73 Aligned_cols=33 Identities=9% Similarity=0.064 Sum_probs=28.0
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
|+++|+|+|+|.+|..++..+.+.|++|.++..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r 33 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSGEDVHFLLR 33 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTSCCEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEEc
Confidence 567899999999999999999999999999853
No 476
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=78.97 E-value=3.4 Score=40.24 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=28.8
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~-~vi~v~~~ 103 (523)
..+++||+|+|..+..++.++.++|. ++++++.+
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 35799999999999999999999999 57666433
No 477
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=78.92 E-value=2.4 Score=39.93 Aligned_cols=31 Identities=16% Similarity=0.190 Sum_probs=27.5
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
.|++||.|+ +.+|..+++.+.+.|++|++++
T Consensus 11 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~ 42 (262)
T 3ksu_A 11 NKVIVIAGGIKNLGALTAKTFALESVNLVLHY 42 (262)
T ss_dssp TCEEEEETCSSHHHHHHHHHHTTSSCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 578999986 6789999999999999999875
No 478
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=78.86 E-value=7.4 Score=37.57 Aligned_cols=72 Identities=13% Similarity=-0.019 Sum_probs=45.4
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHc---C---CcEEEEecCCCCCC--cccccc--C--eeEEcCCCCCCCCCCCHHHHHHH
Q 009903 72 EKILVANR-GEIAVRVIRTAHEM---G---IPCVAVYSTIDKDA--LHVKLA--D--ESVCIGEAPSSQSYLLIPNVLSA 138 (523)
Q Consensus 72 k~ILi~g~-g~~~~~vi~aa~~~---G---~~vi~v~~~~~~~~--~~~~~a--d--~~~~~~~~~~~~~~~~~~~l~~~ 138 (523)
|+|||+|+ |.+|..+++.+.+. | ++|++++....... ....+. . +.+.. +..+.+.+.++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~ 73 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG-------DIRDAGLLARE 73 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEEC-------CTTCHHHHHHH
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEc-------CCCCHHHHHHH
Confidence 37999995 88999999999996 8 89998864321111 011111 1 12222 35667777766
Q ss_pred HHHcCCCEEEeCCC
Q 009903 139 AISRGCTMLHPGYG 152 (523)
Q Consensus 139 ~~~~~id~Vi~~~g 152 (523)
+ .++|.|+-..+
T Consensus 74 ~--~~~d~Vih~A~ 85 (337)
T 1r6d_A 74 L--RGVDAIVHFAA 85 (337)
T ss_dssp T--TTCCEEEECCS
T ss_pred h--cCCCEEEECCC
Confidence 6 57999886543
No 479
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=78.84 E-value=2.1 Score=43.72 Aligned_cols=34 Identities=9% Similarity=0.023 Sum_probs=30.3
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCC--cEEEEecC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGI--PCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~--~vi~v~~~ 103 (523)
+.++|+|+|+|..|..++.+|.+.|+ +|++++..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecC
Confidence 45789999999999999999999999 99999543
No 480
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=78.82 E-value=4.1 Score=40.61 Aligned_cols=78 Identities=13% Similarity=0.078 Sum_probs=49.0
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCccccc-cCeeEEcCCCCCCCCCCC-HHHHHHHHHHcCCC
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLL-IPNVLSAAISRGCT 145 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~-~vi~v~~~~~~~~~~~~~-ad~~~~~~~~~~~~~~~~-~~~l~~~~~~~~id 145 (523)
....+|||+|+|..|..+++.|+.+|. +|++++.+........++ +|..+... +...+ .+.+.++... ++|
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~-----~~~~~~~~~i~~~~~g-g~D 265 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPK-----DHDKPIQEVIVDLTDG-GVD 265 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGG-----GCSSCHHHHHHHHTTS-CBS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccc-----cCchhHHHHHHHhcCC-CCC
Confidence 346789999999999999999999999 788885444433333333 34433210 00122 3344444433 899
Q ss_pred EEEeCCC
Q 009903 146 MLHPGYG 152 (523)
Q Consensus 146 ~Vi~~~g 152 (523)
.|+-+.+
T Consensus 266 ~vid~~g 272 (378)
T 3uko_A 266 YSFECIG 272 (378)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9997654
No 481
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=78.75 E-value=2.4 Score=39.57 Aligned_cols=77 Identities=10% Similarity=0.058 Sum_probs=45.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-cccccCeeEEcCCCCCCCCCCCHHHHHHHHHH-----cC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RG 143 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~-~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~ 143 (523)
.|++||+|+ |.+|..+++.+.+.|++|++++.+.+.... ...+......+. .|..+.+.+.++++. .+
T Consensus 6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~v~~~~~~~~~~~g~ 80 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVR-----HDVSSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEEC-----CCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEE-----ccCCCHHHHHHHHHHHHHHcCC
Confidence 478999986 678999999999999999988432211100 000111122221 235556655555443 26
Q ss_pred CCEEEeCCC
Q 009903 144 CTMLHPGYG 152 (523)
Q Consensus 144 id~Vi~~~g 152 (523)
+|.++-.-+
T Consensus 81 id~lv~~Ag 89 (253)
T 1hxh_A 81 LNVLVNNAG 89 (253)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 898886544
No 482
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=78.75 E-value=1.8 Score=42.57 Aligned_cols=148 Identities=14% Similarity=0.006 Sum_probs=78.1
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCccccccCee--EEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADES--VCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~ad~~--~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
|+.+|.|+|.|..+...++++ ..+++++.+. +.+........++.. +.++ ..-|.+.+++++ +..+|+|
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~-d~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~---~~~vD~V 71 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL-DEECSITGIA-PGVPEEDLSKLEKAISEMNIK----PKKYNNWWEMLE---KEKPDIL 71 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC-CTTEEEEEEE-CSSTTCCCHHHHHHHHTTTCC----CEECSSHHHHHH---HHCCSEE
T ss_pred CceEEEEEccchhHHHHHHhc-CCCcEEEEEe-cCCchhhHHHHHHHHHHcCCC----CcccCCHHHHhc---CCCCCEE
Confidence 568999999887777777777 6788888775 322211111111100 0000 012567777665 3579999
Q ss_pred EeCCCcccccHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHCCCC--C-CCCCCccCCCHHHHHHHHH--hcCC
Q 009903 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP--T-VPGSDGLLQSTEEAVKLAD--ELGF 222 (523)
Q Consensus 148 i~~~g~~~e~~~~a~~~~~~gl~~~g~~~~~~~~~~dK~~~r~~l~~~Gip--~-p~~~~~~~~s~~e~~~~~~--~~g~ 222 (523)
+.+... .....++..+.+.|.+++.--|-+. ...+=..+.+..+++|+. . ..+..+.......+.+.++ ++|-
T Consensus 72 ~I~tp~-~~H~~~~~~al~aGkhVl~EKPla~-~~~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~~~~k~~i~~g~iG~ 149 (337)
T 3ip3_A 72 VINTVF-SLNGKILLEALERKIHAFVEKPIAT-TFEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHFLTAKKLVSEGAVGE 149 (337)
T ss_dssp EECSSH-HHHHHHHHHHHHTTCEEEECSSSCS-SHHHHHHHHHHHHHHTTTCCEEECCGGGGSHHHHHHHHHHHHTTTSS
T ss_pred EEeCCc-chHHHHHHHHHHCCCcEEEeCCCCC-CHHHHHHHHHHHHHhCCceEEEecccccCCHHHHHHHHHHhcCCccc
Confidence 876521 1234566667788887764222211 111223445566777765 1 2221122223455666665 5676
Q ss_pred cEEEEe
Q 009903 223 PVMIKA 228 (523)
Q Consensus 223 P~VvKP 228 (523)
+..+.-
T Consensus 150 i~~i~~ 155 (337)
T 3ip3_A 150 IRLVNT 155 (337)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 665553
No 483
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=78.73 E-value=1.9 Score=41.30 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=28.4
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
.|++||+|+ +.+|..+++.+.+.|++|+++..+
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999986 678999999999999999998543
No 484
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=78.67 E-value=2.2 Score=42.24 Aligned_cols=34 Identities=15% Similarity=0.045 Sum_probs=30.4
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
+...|+|||+|..|..++..|.+.|++|++++..
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 4568999999999999999999999999999543
No 485
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=78.62 E-value=2.3 Score=39.70 Aligned_cols=78 Identities=12% Similarity=-0.005 Sum_probs=43.6
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcC--CcEEEEecCCCCCCc-cccccCeeEEcCCCCCCCCCCCHHHHHHHHHHc---
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMG--IPCVAVYSTIDKDAL-HVKLADESVCIGEAPSSQSYLLIPNVLSAAISR--- 142 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G--~~vi~v~~~~~~~~~-~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 142 (523)
|.|++||+|+ +.+|..+++.+.+.| +.|+++..+.+.... ...+......+. .|..+.+.+.+++++.
T Consensus 1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dv~~~~~v~~~~~~~~~~ 75 (254)
T 3kzv_A 1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVV-----GDITEDSVLKQLVNAAVKG 75 (254)
T ss_dssp -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEE-----SCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEE-----CCCCCHHHHHHHHHHHHHh
Confidence 5688999996 678999999999886 666665432211100 001111222221 1355666665555432
Q ss_pred --CCCEEEeCCC
Q 009903 143 --GCTMLHPGYG 152 (523)
Q Consensus 143 --~id~Vi~~~g 152 (523)
++|.++-.-+
T Consensus 76 ~g~id~lvnnAg 87 (254)
T 3kzv_A 76 HGKIDSLVANAG 87 (254)
T ss_dssp HSCCCEEEEECC
T ss_pred cCCccEEEECCc
Confidence 7998886544
No 486
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=78.59 E-value=2.2 Score=40.74 Aligned_cols=32 Identities=13% Similarity=0.104 Sum_probs=29.4
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
+++|.|+|.|.+|..++..+.+.|++|++++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 57999999999999999999999999999853
No 487
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=78.56 E-value=2.1 Score=42.35 Aligned_cols=35 Identities=11% Similarity=0.106 Sum_probs=30.7
Q ss_pred CCCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 68 TCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 68 ~~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.+++++|.|+|.|.+|..+++.+++.|++|++++.
T Consensus 5 ~~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr 39 (341)
T 3ktd_A 5 KDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNR 39 (341)
T ss_dssp -CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeC
Confidence 45578899999999999999999999999998843
No 488
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=78.47 E-value=1.6 Score=45.43 Aligned_cols=34 Identities=12% Similarity=0.029 Sum_probs=30.3
Q ss_pred CccEEEEEcCcHHHHHHHHHHHH---cCCcEEEEecC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHE---MGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~---~G~~vi~v~~~ 103 (523)
|+.+|+|+|+|..|..++..|.+ .|++|+++...
T Consensus 1 m~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~ 37 (511)
T 2weu_A 1 MIRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESG 37 (511)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-
T ss_pred CcceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecC
Confidence 56799999999999999999999 99999999643
No 489
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=78.35 E-value=1.6 Score=43.21 Aligned_cols=76 Identities=17% Similarity=0.154 Sum_probs=48.0
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCccccc-cCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~-G~~vi~v~~~~~~~~~~~~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
...+|||.|+|..|..+++.|+.+ |.+|++++.+.+......++ +|+.+... +. ..+.+.++....++|.|
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~------~~-~~~~v~~~~~g~g~Dvv 258 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR------RD-PVKQVMELTRGRGVNVA 258 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT------SC-HHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEecc------ch-HHHHHHHHhCCCCCcEE
Confidence 457999999999999999999999 99988886433322222223 45444321 11 22344444333478999
Q ss_pred EeCCC
Q 009903 148 HPGYG 152 (523)
Q Consensus 148 i~~~g 152 (523)
+-+.+
T Consensus 259 id~~G 263 (359)
T 1h2b_A 259 MDFVG 263 (359)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 86654
No 490
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=78.31 E-value=2.4 Score=40.87 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=29.2
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
+++|.|+|.|.+|..++..+.+.|++|++++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 57899999999999999999999999999853
No 491
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=78.31 E-value=1.5 Score=40.32 Aligned_cols=76 Identities=12% Similarity=0.093 Sum_probs=47.0
Q ss_pred CCccEEEEE--cCcHHHHHHHHHHHH-cCCcEEEEecCCCCCCccccccCe----eEEcCCCCCCCCCCC----HHHHHH
Q 009903 69 CRQEKILVA--NRGEIAVRVIRTAHE-MGIPCVAVYSTIDKDALHVKLADE----SVCIGEAPSSQSYLL----IPNVLS 137 (523)
Q Consensus 69 ~~~k~ILi~--g~g~~~~~vi~aa~~-~G~~vi~v~~~~~~~~~~~~~ad~----~~~~~~~~~~~~~~~----~~~l~~ 137 (523)
.+++||.|+ |.|.....++++.++ ++++++++.++++ .+....|.+ .+.++ ..++.+ -+++++
T Consensus 10 ~~~~ri~vl~SG~gsnl~all~~~~~~~~~eI~~Vis~~~--a~~~~~A~~~gIp~~~~~----~~~~~~r~~~d~~~~~ 83 (215)
T 3da8_A 10 SAPARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRE--CRAAEIAAEASVPVFTVR----LADHPSRDAWDVAITA 83 (215)
T ss_dssp CSSEEEEEEESSCCHHHHHHHHHSSTTCSEEEEEEEESSC--CHHHHHHHHTTCCEEECC----GGGSSSHHHHHHHHHH
T ss_pred CCCcEEEEEEeCChHHHHHHHHHHhccCCCeEEEEEeCCc--hHHHHHHHHcCCCEEEeC----cccccchhhhhHHHHH
Confidence 346788888 778888888887754 4558888876665 444443332 22221 111212 346788
Q ss_pred HHHHcCCCEEEeC
Q 009903 138 AAISRGCTMLHPG 150 (523)
Q Consensus 138 ~~~~~~id~Vi~~ 150 (523)
.+++.++|.|+..
T Consensus 84 ~l~~~~~Dlivla 96 (215)
T 3da8_A 84 ATAAHEPDLVVSA 96 (215)
T ss_dssp HHHTTCCSEEEEE
T ss_pred HHHhhCCCEEEEc
Confidence 8888999987753
No 492
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=78.30 E-value=1.5 Score=41.99 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=27.3
Q ss_pred ccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009903 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (523)
Q Consensus 71 ~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~ 101 (523)
.|++||+|+ +.+|..+++.+.+.|++|++++
T Consensus 9 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEc
Confidence 578999985 6789999999999999999885
No 493
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=78.27 E-value=2.2 Score=41.25 Aligned_cols=33 Identities=9% Similarity=0.145 Sum_probs=29.4
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
++++|.|+|.|.+|..+++.+.+.|++|++++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEEC
Confidence 457999999999999999999999999998853
No 494
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=78.22 E-value=2.5 Score=40.94 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=29.8
Q ss_pred ccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
+++|+|+|+|..|...+..|++.|++|.+++..
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPL 37 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 468999999999999999999999999999644
No 495
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=78.18 E-value=2.5 Score=40.94 Aligned_cols=34 Identities=9% Similarity=0.025 Sum_probs=30.3
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~ 102 (523)
.++++|.|+|.|.+|..+++.+.+.|++|++++.
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3467899999999999999999999999998843
No 496
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=78.13 E-value=2.3 Score=42.18 Aligned_cols=34 Identities=12% Similarity=0.181 Sum_probs=30.2
Q ss_pred CccEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~~G~~vi~v~~~ 103 (523)
|...|+|||+|..|..++..|.+.|++|++++..
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~ 35 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAF 35 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3468999999999999999999999999999643
No 497
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=78.13 E-value=2.2 Score=43.95 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=29.2
Q ss_pred CccEEEEEcCcHHHHHHHHHHHH---cCCc---EEEEecC
Q 009903 70 RQEKILVANRGEIAVRVIRTAHE---MGIP---CVAVYST 103 (523)
Q Consensus 70 ~~k~ILi~g~g~~~~~vi~aa~~---~G~~---vi~v~~~ 103 (523)
|.++|+|+|+|..|...+..|.+ .|++ |++++..
T Consensus 1 M~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~ 40 (464)
T 2xve_A 1 MATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQ 40 (464)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSS
T ss_pred CCCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcC
Confidence 45789999999999999999999 9999 9999543
No 498
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=78.13 E-value=2.2 Score=41.95 Aligned_cols=77 Identities=19% Similarity=0.120 Sum_probs=51.5
Q ss_pred CCccEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCccccc-cCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009903 69 CRQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (523)
Q Consensus 69 ~~~k~ILi~g~g~~~~~vi~aa~~~-G~~vi~v~~~~~~~~~~~~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~ 146 (523)
....+|||.|+|..|...++.|+.+ |.+|++++.+.+......++ +|..+... ....+.+.++....++|.
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~-------~~~~~~v~~~t~g~g~d~ 242 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSG-------AGAADAIRELTGGQGATA 242 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECS-------TTHHHHHHHHHGGGCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCC-------CcHHHHHHHHhCCCCCeE
Confidence 3467999999999999999999999 78888886544333333333 44444311 123456666666568999
Q ss_pred EEeCCC
Q 009903 147 LHPGYG 152 (523)
Q Consensus 147 Vi~~~g 152 (523)
|+-+.+
T Consensus 243 v~d~~G 248 (345)
T 3jv7_A 243 VFDFVG 248 (345)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 997654
No 499
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=78.13 E-value=5.3 Score=39.51 Aligned_cols=138 Identities=10% Similarity=-0.035 Sum_probs=76.1
Q ss_pred ccEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEecCCCCCCccccccCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009903 71 QEKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (523)
Q Consensus 71 ~k~ILi~g~g~~~~~-vi~aa~~~-G~~vi~v~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~Vi 148 (523)
+.+|.|+|.|.+|.. .+..+++. +++++.+. +.+.......+... .-+.+.+++++ ...+|+|+
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~-d~~~~~~~~~~~~~----------~~~~~~~~ll~---~~~vD~V~ 70 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIV-ERSKELSKERYPQA----------SIVRSFKELTE---DPEIDLIV 70 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEE-CSSCCGGGTTCTTS----------EEESCSHHHHT---CTTCCEEE
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEE-cCCHHHHHHhCCCC----------ceECCHHHHhc---CCCCCEEE
Confidence 358999999999886 67777776 78887664 33322211111111 12445555554 45699998
Q ss_pred eCCCcccccHHHHHHHHHcCCceeC-----CCHHHHHHhCCHHHHHHHHHHCCCCCCCCCC-ccCCCHHHHHHHHHh--c
Q 009903 149 PGYGFLAENAVFVEMCREHGINFIG-----PNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLADE--L 220 (523)
Q Consensus 149 ~~~g~~~e~~~~a~~~~~~gl~~~g-----~~~~~~~~~~dK~~~r~~l~~~Gip~p~~~~-~~~~s~~e~~~~~~~--~ 220 (523)
.+... .....++..+.+.|.+++. .+.+.+ ..+.+..++.|+..--.+. +.......+.+.+++ +
T Consensus 71 i~tp~-~~H~~~~~~al~aGkhVl~EKP~a~~~~ea------~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i 143 (362)
T 3fhl_A 71 VNTPD-NTHYEYAGMALEAGKNVVVEKPFTSTTKQG------EELIALAKKKGLMLSVYQNRRWDADFLTVRDILAKSLL 143 (362)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEEESSCCSSHHHH------HHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHHTTTT
T ss_pred EeCCh-HHHHHHHHHHHHCCCeEEEecCCCCCHHHH------HHHHHHHHHcCCEEEEEecceeCHHHHHHHHHHHcCCC
Confidence 77532 1235666777778887653 233322 2345556667765432210 112233455555553 5
Q ss_pred CCcEEEEeC
Q 009903 221 GFPVMIKAT 229 (523)
Q Consensus 221 g~P~VvKP~ 229 (523)
|-+..+.-.
T Consensus 144 G~i~~v~~~ 152 (362)
T 3fhl_A 144 GRLVEYEST 152 (362)
T ss_dssp SSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 666655543
No 500
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=78.12 E-value=2.1 Score=42.39 Aligned_cols=77 Identities=14% Similarity=0.172 Sum_probs=47.0
Q ss_pred CccEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCccccc-cCeeEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009903 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (523)
Q Consensus 70 ~~k~ILi~g~-g~~~~~vi~aa~~~G~~vi~v~~~~~~~~~~~~~-ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~id~V 147 (523)
..++|||+|+ |..|..+++.|+.+|.+|++++.+.+.......+ ++..+... +....+.+.+.....++|.|
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~------~~~~~~~~~~~~~~~~~D~v 243 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHR------EVNYIDKIKKYVGEKGIDII 243 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETT------STTHHHHHHHHHCTTCEEEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCC------CchHHHHHHHHcCCCCcEEE
Confidence 4679999997 9999999999999999988885433222211222 33333221 11223444444433478999
Q ss_pred EeCCC
Q 009903 148 HPGYG 152 (523)
Q Consensus 148 i~~~g 152 (523)
+-+.+
T Consensus 244 i~~~G 248 (351)
T 1yb5_A 244 IEMLA 248 (351)
T ss_dssp EESCH
T ss_pred EECCC
Confidence 86554
Done!