Your job contains 1 sequence.
>009904
MDMSDKDKFVLEKRNDNPMDYHSPNMSSDWQFSGANLANAALNLVPTGNPLGVGSSSCSS
APMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSCIDRPLDIGW
NPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEP
TGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLK
NERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKR
KRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKE
EYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQS
LQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQA
GLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPSQVSFYPQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009904
(523 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 709 5.0e-85 2
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 688 9.2e-68 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 624 5.5e-61 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 501 8.1e-57 3
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 507 1.4e-48 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 483 4.8e-46 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 461 6.0e-46 2
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 436 1.2e-45 2
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 467 2.4e-44 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 434 7.5e-41 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 433 9.6e-41 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 430 2.0e-40 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 426 5.3e-40 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 425 6.8e-40 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 424 8.7e-40 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 419 1.8e-38 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 370 1.0e-36 2
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 384 1.5e-35 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 383 1.9e-35 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 370 4.6e-34 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 362 3.2e-33 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 360 5.2e-33 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 333 6.9e-32 2
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 342 6.2e-31 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 340 1.1e-30 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 317 4.7e-28 1
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 211 1.1e-27 2
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 244 5.6e-20 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 232 1.1e-18 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 217 4.9e-17 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 219 3.9e-16 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 223 4.8e-16 2
UNIPROTKB|Q69WX7 - symbol:P0417G12.19 "Basic helix-loop-h... 201 2.7e-15 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 211 3.3e-15 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 221 4.0e-15 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 217 1.0e-14 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 213 1.5e-14 1
UNIPROTKB|Q6Z1F9 - symbol:OSJNBa0033D24.39 "BHLH transcri... 185 1.4e-13 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 186 1.0e-12 2
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 174 1.8e-12 2
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 185 6.8e-12 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 189 1.5e-11 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 166 1.6e-11 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 184 4.2e-11 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 166 1.1e-10 2
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 175 2.1e-10 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 153 4.1e-10 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 170 4.4e-10 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 172 6.6e-10 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 170 1.3e-09 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 168 1.5e-09 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 165 4.3e-09 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 163 4.5e-09 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 165 4.6e-09 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 166 4.9e-09 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 161 8.3e-09 2
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 156 9.0e-09 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 156 1.1e-08 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 160 1.3e-08 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 160 2.5e-08 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 162 3.1e-08 2
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 157 4.4e-08 2
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 154 5.1e-08 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 144 5.4e-08 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 151 6.3e-08 1
UNIPROTKB|Q8S0C6 - symbol:B1112D09.6 "Uncharacterized pro... 154 7.9e-08 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 152 8.8e-08 1
DICTYBASE|DDB_G0286885 - symbol:DDB_G0286885 species:4468... 154 1.2e-07 1
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 143 1.4e-07 2
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 142 1.6e-07 1
UNIPROTKB|Q6Z339 - symbol:B1121A12.20 "Os02g0726700 prote... 149 1.6e-07 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 145 3.4e-07 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 131 4.3e-07 2
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 141 4.4e-07 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 142 6.4e-07 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 145 8.0e-07 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 139 1.0e-06 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 131 1.3e-06 1
DICTYBASE|DDB_G0271916 - symbol:rtoA "unknown" species:44... 139 2.4e-06 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 133 3.0e-06 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 131 4.4e-06 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 129 1.1e-05 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 127 1.3e-05 1
RGD|1306536 - symbol:Rrbp1 "ribosome binding protein 1" s... 139 1.5e-05 1
MGI|MGI:1932395 - symbol:Rrbp1 "ribosome binding protein ... 138 2.4e-05 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 127 3.2e-05 1
UNIPROTKB|I3L7I3 - symbol:FLG2 "Uncharacterized protein" ... 138 3.7e-05 1
TAIR|locus:2098008 - symbol:PIL2 "phytochrome interacting... 128 3.9e-05 1
WB|WBGene00004264 - symbol:qua-1 species:6239 "Caenorhabd... 134 4.6e-05 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 120 7.1e-05 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 122 7.2e-05 1
UNIPROTKB|Q2QML8 - symbol:LOC_Os12g40730 "Helix-loop-heli... 126 7.3e-05 1
WB|WBGene00013762 - symbol:Y113G7B.12 species:6239 "Caeno... 131 7.9e-05 1
TAIR|locus:2098383 - symbol:AT3G28780 "AT3G28780" species... 129 8.0e-05 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 125 8.7e-05 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 115 9.7e-05 2
TAIR|locus:2179122 - symbol:APTX "APRATAXIN-like" species... 129 0.00012 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 123 0.00017 2
DICTYBASE|DDB_G0287399 - symbol:DDB_G0287399 species:4468... 124 0.00017 1
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 123 0.00018 1
WARNING: Descriptions of 23 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 709 (254.6 bits), Expect = 5.0e-85, Sum P(2) = 5.0e-85
Identities = 162/270 (60%), Positives = 188/270 (69%)
Query: 246 ESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQ 305
ES V S +AK V SG S++ + SGG GQ G E S+ ++KKRKRNGQ
Sbjct: 195 ESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQK--------GRETSS---NTKKRKRNGQ 243
Query: 306 -DIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKS-AGKQGKQGSQTSDPPKEEYI 363
+ E Q+ Q S E +N + +R + P+S G KS +GKQ QG Q+SDPPK+ YI
Sbjct: 244 KNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQ--QGKQSSDPPKDGYI 301
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEIINYVQSLQR
Sbjct: 302 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 361
Query: 424 QVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLM 483
QVEFLSMKLATVNP++DFN+E LLAKD LQ RAG SST F P+M + YPP+ G M
Sbjct: 362 QVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPPNMSMAYPPLPH---GFM 418
Query: 484 HGALPGMGNPSDILRRTINSQLTPMTGGFK 513
L +G RTI S L+PM GGFK
Sbjct: 419 QQTLSSIG-------RTITSPLSPMNGGFK 441
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 105/293 (35%), Positives = 142/293 (48%)
Query: 46 PTGNPLGVGSSSCSSAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSS 105
P+ N + G +SCS + M+DSF QT+W PT+ Q++GY + NASSS
Sbjct: 35 PSENLISAGPASCSPSQMMDSFGQTLWYDPTSVQAVGYAGFNGG-NASSS---------- 83
Query: 106 ASLRSCIDRPLDIGWN-PASSMIKG-GIFLPNAPGMFPQSLSQFPADSAFIERAARFSSF 163
S R IDR L++GWN P KG G+FLPNA P S++QFPADS FIERAARFS F
Sbjct: 84 -SFRGSIDRSLEMGWNLPNLLPPKGNGLFLPNASSFLPPSMAQFPADSGFIERAARFSLF 142
Query: 164 SGGNFCDMMNT-FGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVS 222
SGGNF DM+N G E GL+ +G G MQG Q Q NE+NV E
Sbjct: 143 SGGNFSDMVNQPLGNSEAIGLFLQGGGTMQG----------------QCQSNELNVGEPH 186
Query: 223 KDASLSVEHGASNGST-LKNERKGESLVNSHGEAKQGVGASGGD-SDEAEFSGGGGQDEP 280
D S++V+ S K G V+ ++ G G G + S + GQ
Sbjct: 187 NDVSVAVKESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQKNS 246
Query: 281 SAVEGTGGEPSAKGLSSK-KRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKG 332
A + + S + + KRN + K S + K +++ + G
Sbjct: 247 EAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDG 299
Score = 161 (61.7 bits), Expect = 5.0e-85, Sum P(2) = 5.0e-85
Identities = 41/100 (41%), Positives = 56/100 (56%)
Query: 1 MDMSDKDKFVLEKRNDNPMDYHSPNM-SSDWQFSGXXXXXXXXXXVPTGNPLGVGSSSCS 59
MD+S KD+F EKRN P +Y S N S DW+ P+ N + G +SCS
Sbjct: 1 MDLSAKDEFSAEKRN--PDNYDSVNNPSGDWRVDSY----------PSENLISAGPASCS 48
Query: 60 SAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALG 99
+ M+DSF QT+W PT+ Q++GY + NASSS+ G
Sbjct: 49 PSQMMDSFGQTLWYDPTSVQAVGYAGFNGG-NASSSSFRG 87
Score = 66 (28.3 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 38/161 (23%), Positives = 63/161 (39%)
Query: 221 VSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEP 280
+ + A S+ G N S + N+ G S + G QG G G E + G ++
Sbjct: 133 IERAARFSLFSGG-NFSDMVNQPLGNS--EAIGLFLQGGGTMQGQCQSNELNVGEPHNDV 189
Query: 281 S-AVEGTGGEPSAKGLSSKKRKRN----GQDIEFDQAKGGQSS-GEAAKDNTENQRKGDH 334
S AV+ E + + SS++ K N G E Q+ GG G NT+ +++
Sbjct: 190 SVAVK----ESTVR--SSEQAKPNVPGSGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQ 243
Query: 335 KPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNS 375
K S +Q ++ + K G+ +NS
Sbjct: 244 KNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNS 284
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 153/268 (57%), Positives = 189/268 (70%)
Query: 266 SDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDN 325
+D+AE G G DE + E GG+ S+KG SKKR+R + + DQ ++A ++
Sbjct: 150 NDKAEEFAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQVHSSNLPSDSANES 209
Query: 326 TENQRKGDHK-PSST-GNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVR 383
++ KG+ P++T G KS GK K+ TS+ KEEYIHVRARRGQATNSHSLAER+R
Sbjct: 210 VHSKDKGEESSPATTNGGKSKGKGAKE---TSESQKEEYIHVRARRGQATNSHSLAERLR 266
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI 443
REKISERMK LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD NI
Sbjct: 267 REKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNI 326
Query: 444 EELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINS 503
E LL+KD+L+ PSS++GFSP+M ++P + SQ GL+HG GM NP D+ RR I +
Sbjct: 327 EGLLSKDLLRFPGVPSSSIGFSPEM--MHPQLQLSQPGLIHGGTAGMANP-DVFRRIIQA 383
Query: 504 QL-------TP--MTGGFKEPSQVSFYP 522
QL P + G F + SQ++ YP
Sbjct: 384 QLGAKDGSQMPHSLNGSFSDVSQMA-YP 410
Score = 127 (49.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 58/202 (28%), Positives = 82/202 (40%)
Query: 128 KGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCD---------MMNTFG-T 177
+G FL PG Q L FP DS FIERAAR + F GG M + FG T
Sbjct: 78 RGAGFLAPVPGFLQQGLGHFPVDSGFIERAARSTCFGGGMMAGGPYGAADQAMGDAFGGT 137
Query: 178 PEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSK-DASLSVEHGASNG 236
E GL R + E FAGNG +E+ +EV+ D S S G
Sbjct: 138 AE--GLMDHHRNVGNDKAEEFAGNG----------HDEVPSSEVAGGDCS-------SKG 178
Query: 237 STLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLS 296
S K R+ ++ + + ++E+ S G+ E S GG+ KG
Sbjct: 179 SDSKKRRRPNEVMGT--DQVHSSNLPSDSANESVHSKDKGE-ESSPATTNGGKSKGKGAK 235
Query: 297 SKKRKRNGQDIEFDQAKGGQSS 318
+ + I +A+ GQ++
Sbjct: 236 ETSESQKEEYIHV-RARRGQAT 256
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 150/281 (53%), Positives = 184/281 (65%)
Query: 242 ERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRK 301
E +G V+ GE +QG G++ A S P G G + + SKKRK
Sbjct: 142 EIEGSKNVSQTGEKQQG----DGETTHAVDSSSKELSMPGRNGGAGHDEGTRVSCSKKRK 197
Query: 302 RNGQDIEFDQAKGGQ---SSGEAAKDNTENQRKGDHKPSSTGN-KSAGKQGKQGSQTSDP 357
R+GQD A+GG+ + G A K+ E+ KG+ K SS + KS+GKQ K + +
Sbjct: 198 RSGQDGGVKHAEGGEQLATVGSAQKN--EDDEKGEPKRSSVASGKSSGKQIKDNAGS--- 252
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
PKE+YIHVRARRGQATNSHSLAERVRREKISERMK+LQDLVPGCSKVTGKAVMLDEIINY
Sbjct: 253 PKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINY 312
Query: 418 VQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGP-SSTLGFSPDM--PLVYPP 474
VQSLQRQVEFLSMKLA+VNP LDFNIE +L+KD+ Q R SS GF PD+ P ++PP
Sbjct: 313 VQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVHPRLHPP 372
Query: 475 VHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEP 515
+ +Q G+ P + NP+D R I++ L FKEP
Sbjct: 373 KY-TQVGM-----PSIVNPTDAFGRVIHAPLGT-NSAFKEP 406
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 501 (181.4 bits), Expect = 8.1e-57, Sum P(3) = 8.1e-57
Identities = 128/271 (47%), Positives = 162/271 (59%)
Query: 245 GESLVNSHGEAKQGVGASGG-DSDEAEFSGGGGQDEPSAVEGTG--GEPSAKGLSSKKRK 301
GE ++N ++ GV S G + + G D + + E S +S +
Sbjct: 96 GEMMMNQQ-QSSLGVPDSTGLFLQDTQIPSGSKLDNGPLTDASKLVKERSINNVSEDSQS 154
Query: 302 RNGQDIEFDQAKGGQSS------------GEAAKDNTENQRKGDHKPSSTGNKSAGKQGK 349
G D AK GQ+S G+ ++ + ++K + P+S NK+ ++
Sbjct: 155 SGGNG--HDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEK-- 210
Query: 350 QGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 409
Q SD K+ YIH+RARRGQATNSHSLAERVRREKISERMKFLQDLVPGC KVTGKAV
Sbjct: 211 ---QPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAV 267
Query: 410 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMP 469
MLDEIINYVQSLQ Q+EFLSMKL+ VNP LDFN+E LLAKD LQS A P+ F +M
Sbjct: 268 MLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSSA-PT----FPHNMS 322
Query: 470 LVYPPV-HQSQAGLMHGALPGMGNPSDILRR 499
++YPPV + SQ G M + M S L+R
Sbjct: 323 MLYPPVSYLSQTGFMQPNISSMSLLSGGLKR 353
Score = 123 (48.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 37/109 (33%), Positives = 55/109 (50%)
Query: 143 SLSQFPADSAFIERAARFSSFSGGNFCDMMN----TFGTPEPTGLYSRGRGMMQGPQEVF 198
+++QFPADS FIERAA+FS F G MMN + G P+ TGL+ + + G +
Sbjct: 73 NMAQFPADSGFIERAAKFSFFGCGEM--MMNQQQSSLGVPDSTGLFLQDTQIPSGSK--- 127
Query: 199 AGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERKGES 247
NG L+ E ++ VS+D+ S +G + + KG S
Sbjct: 128 LDNG--PLTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFS 174
Score = 61 (26.5 bits), Expect = 8.1e-57, Sum P(3) = 8.1e-57
Identities = 26/111 (23%), Positives = 47/111 (42%)
Query: 46 PTGNPLGVGSSSCSSAPMVDSFNQTIW-DHPTNSQSLGYCNIDAQHNASSSNALGIRKGS 104
P NP+ +G S PM+DSF +T+W D N + + +N +G
Sbjct: 23 PPENPM-LGPS-----PMMDSFRETLWHDGGFNVHTDADTSFRGNNNIDIPLEMGWNMAQ 76
Query: 105 SASLRSCIDRPLDIGWNPASSMI----KGGIFLPNAPGMFPQSLSQFPADS 151
+ I+R + M+ + + +P++ G+F Q +Q P+ S
Sbjct: 77 FPADSGFIERAAKFSFFGCGEMMMNQQQSSLGVPDSTGLFLQD-TQIPSGS 126
Score = 52 (23.4 bits), Expect = 8.1e-57, Sum P(3) = 8.1e-57
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 3 MSDKDKFVLEKRN--DNPMDYHSP 24
MSDKD+F +K++ + P+D + P
Sbjct: 1 MSDKDEFAAKKKDLVNTPVDLYPP 24
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 131/276 (47%), Positives = 166/276 (60%)
Query: 259 VGASGGDSDEAEFSGGGGQDEPSAVEG--------TGG--EPSAKGLSSKKRKRNGQDIE 308
V S G + A SG G P+AV G +GG EP+ S K++R+ +
Sbjct: 60 VSPSTGAATAA--SGAGFLLPPAAVRGGFGSFPVNSGGIVEPAGDCSSESKKRRSDEIAG 117
Query: 309 FDQAKGGQS---SG---EAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEY 362
D A + SG E +KD + G ++ G KS GK K + KE Y
Sbjct: 118 TDHANASNALADSGNETECSKD-VNGEVIGPPATAAAGGKSKGKGAKDAGEAQ---KEGY 173
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
HVRAR+GQATN+HSLAER+RREKISERMK LQDLVPGCSKVTGKA+MLDEIINYVQSLQ
Sbjct: 174 SHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQ 233
Query: 423 RQVEFLSMKLATVNPRLDFNIEELL--AKDVLQSRAGPSST-LGFSPDMPLVYPPVHQSQ 479
RQVEFLSMKL+ VNPR+D +IE L+ +KDVL+ PSS +GFS ++ P + S+
Sbjct: 234 RQVEFLSMKLSAVNPRIDLDIESLVNNSKDVLRFPGQPSSAPMGFSFSTEMM-PGLQLSR 292
Query: 480 AGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEP 515
G++ G + GM NP D+ + Q G F+EP
Sbjct: 293 PGILQGGVHGMINP-DVFTSLMQKQQQNDKGAFREP 327
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 126/256 (49%), Positives = 153/256 (59%)
Query: 244 KGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTG-GEPSAKGLSSKKRKR 302
K L N+ E+ A GG + + G + A G G G+ S S+ K
Sbjct: 164 KEMELGNTRDESSVSDPAPGGAEIPPKGASDGNARKRKA-SGKGKGKDSPMSTSAAKEDS 222
Query: 303 NGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEY 362
+G+ + K + S AA+ EN KG S++ N KQGK S P ++Y
Sbjct: 223 SGK-----RCKSTEESNAAAE---ENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPPKDY 274
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
IHVRARRG+AT+SHSLAERVRREKIS+RMK LQDLVPGC+KV GKAVMLDEIINYVQSLQ
Sbjct: 275 IHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQ 334
Query: 423 RQVEFLSMKLATVNPRLDFN-IEELLAKDVLQSRAGPSSTLGF---SPDMPLVYPPVHQS 478
RQVEFLSMKLATVNP+LDFN + LLAKD+ QS P + F + PL Y ++Q
Sbjct: 335 RQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQS-CSPLQSSHFPLETSGAPLPY--INQP 391
Query: 479 QAG--LMHGALPGMGN 492
Q G L G GM N
Sbjct: 392 QQGNPLGCGLTNGMDN 407
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 127/262 (48%), Positives = 153/262 (58%)
Query: 253 GEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGT--GGEPSAKGLS---SKKRKRNGQDI 307
G A+ G+ +G E G +DE S + G E KG S ++KRK +G+
Sbjct: 148 GPAQFGLPDAGAAGASKEMELGNTRDESSVSDPAPGGAEIPPKGASDGNARKRKASGKGK 207
Query: 308 EFDQ-----AKGGQSSGEAAKDNTE-------NQRKGDHKPSSTGNKSAGKQGKQGSQTS 355
D A SSG+ K E N KG S++ N KQGK S
Sbjct: 208 GKDSPMSTSAAKEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKP 267
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
P ++YIHVRARRG+AT+SHSLAERVRREKIS+RMK LQDLVPGC+KV GKAVMLDEII
Sbjct: 268 PEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEII 327
Query: 416 NYVQSLQRQVEFLSMKLATVNPRLDFN-IEELLAKDVLQSRAGPSSTLGFSPDMP-LVYP 473
NYVQSLQRQVEFLSMKLATVNP+LDFN + LLAKD+ QS P + F + P
Sbjct: 328 NYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQS-CSPLQSSHFPLETSGAPLP 386
Query: 474 PVHQSQAGLMHGALPGMGNPSD 495
++Q Q G G G+ N D
Sbjct: 387 YINQPQQGNPLGC--GLTNGMD 406
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 461 (167.3 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 106/209 (50%), Positives = 132/209 (63%)
Query: 296 SSKKRKRNGQDIEFDQAKGGQSSG--EAAKDNTENQRKGDHKPSSTGN-KSAGK-QGKQG 351
SS ++R G D SS TE + + N KS K Q K+
Sbjct: 74 SSGAKRRKGIDDHIALLNPSASSRIQNVGDQQTEVSSQQERISMEEDNQKSCSKMQSKED 133
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
S D KE+Y+HVRA+RGQATNSHSLAER+RR+KISERMK LQDLVPGCSK+TGKAVML
Sbjct: 134 SSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVML 193
Query: 412 DEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLV 471
DEIINYVQSLQRQVEFLSMKLATVNP L F+IE++L+K ++ S+ + G P +
Sbjct: 194 DEIINYVQSLQRQVEFLSMKLATVNPELSFDIEQILSKQMMLSQDRHLAFYGVDPGSSAL 253
Query: 472 YPPVHQSQAGLMHGALPGMGNPSDILRRT 500
H +Q + L + NP+D+L+ T
Sbjct: 254 V--AHFNQGIMQPEMLCNVSNPADVLQGT 280
Score = 38 (18.4 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 9/32 (28%), Positives = 11/32 (34%)
Query: 52 GVGSSSCSSAPMVDSFNQTIWDHPTNSQSLGY 83
G S C F + WD Q +GY
Sbjct: 4 GQQSDQCPGPNSGKEFLEVNWDSVALHQKMGY 35
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 436 (158.5 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 103/177 (58%), Positives = 121/177 (68%)
Query: 279 EPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSS 338
+P A GE S G S+KRK K Q+S A + E + K D P
Sbjct: 188 KPLASHVPAGESS--GELSRKRK----------TKSKQNSPSAVSSSKEIEEKEDSDP-- 233
Query: 339 TGNKSAGKQGKQGSQT-SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 397
K K + G +T S P ++YIHVRARRGQAT+SHSLAERVRREKISERMK LQDL
Sbjct: 234 ---KRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 290
Query: 398 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQS 454
VPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKL++VN RLDFN++ LL+KD+ S
Sbjct: 291 VPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPS 347
Score = 60 (26.2 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 32/133 (24%), Positives = 59/133 (44%)
Query: 57 SCSSAPMVDSFNQTI-WDHPTNSQSL---GYCNIDAQHNASSSN-ALGIRKGSSASLRSC 111
S + P+ S ++ + W+ T QS+ ++ + S+SN ++G G + +R
Sbjct: 31 SMETQPVDPSLSRNLFWEKSTE-QSIFDSALSSLVSSPTPSNSNFSVGGVGGENVIMREL 89
Query: 112 IDRPLDIG--WNPASSMIKGGIFLPNA---PGMFPQS-----LSQFPADSAFIERAARFS 161
I + +IG + +S P + PG ++ +++ D F ERAARFS
Sbjct: 90 IGKLGNIGDIYGITASNGNSCYATPMSSPPPGSMMETKTTTPMAELSGDPGFAERAARFS 149
Query: 162 SFSGGNFCDMMNT 174
F +F N+
Sbjct: 150 CFGSRSFNSRTNS 162
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 93/153 (60%), Positives = 120/153 (78%)
Query: 316 QSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQ--GKQGSQTSDPPKEEYIHVRARRGQAT 373
Q + +A ++ E+ ++G+ + K+ K+ SQ+ + PKE YIH+RARRGQAT
Sbjct: 155 QWNKKAVEEFQEDPQRGNDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQAT 214
Query: 374 NSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 433
NSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLA
Sbjct: 215 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 274
Query: 434 TVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSP 466
TVNP ++ +I+ +LAKD+LQSR + TLG +P
Sbjct: 275 TVNPEINIDIDRILAKDLLQSRDRNTPTLGLNP 307
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 106/223 (47%), Positives = 140/223 (62%)
Query: 234 SNGSTLKNERKGESLVNSHGEAKQGVGAS---GGDSDEAEFSGGGGQDEPSAVEGTGGEP 290
+NG+ + N + V+S K V GG+ S G+ + + + P
Sbjct: 183 NNGNNMVNNSGKLTRVSSTPALKALVSPEVTPGGEFSRKRKSVPKGKSKENPISTASPSP 242
Query: 291 SAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQ 350
S + K + G + + KGG+ E +D+ E + +G+ GNKS
Sbjct: 243 SFSKTAEKNGGKGGS--KSSEEKGGKRRREE-EDDEEEEGEGE------GNKS------N 287
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
++ +PPK+ YIHVRARRGQAT+SHSLAERVRREKI ERMK LQDLVPGC+KVTGKA+M
Sbjct: 288 NTKPPEPPKD-YIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALM 346
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNP-RLDFNIEELLAKDVL 452
LDEIINYVQSLQRQVEFLSMKL++VN RLDFN++ L++KDV+
Sbjct: 347 LDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVM 389
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 110/242 (45%), Positives = 144/242 (59%)
Query: 234 SNGSTLKNERKGESLVNSHGEAKQGVG--ASGGDSDEAEFSGGGGQD-EPSAVEGTGGEP 290
+NG +R G + G G A GG + + S + +A +
Sbjct: 65 NNGGGGVGQRYGGAGAGLFGMPPPAPGDFAGGGSREASSVSDPASSAMKDAAANAKKRKS 124
Query: 291 SAKGLSSKKRKRN----GQDIEFDQAKGGQSSGEAAKD-NTENQRKGDHKPSSTGNKSAG 345
+A ++ K K G++ E D + +GE + ++ G G
Sbjct: 125 TAAAAAAAKGKGKEPPVGEEKESDGKRCKTGNGEKESSVKPKAEQAGSDSSVEDGGGGGQ 184
Query: 346 KQGK-QGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
KQGK + ++ +PPK+ Y+HVRARRGQAT+SHSLAERVRRE+IS+RMK LQDLVPGC+KV
Sbjct: 185 KQGKGKNAKPVEPPKD-YVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKV 243
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDVLQSRAGPSSTLG 463
GKA+MLDEIINYVQSLQRQVEFLSMKLATVNP LDF N+ LL KD+ Q+ GPS++
Sbjct: 244 IGKALMLDEIINYVQSLQRQVEFLSMKLATVNP-LDFSNLPTLLQKDMFQA-CGPSASSV 301
Query: 464 FS 465
FS
Sbjct: 302 FS 303
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 102/229 (44%), Positives = 132/229 (57%)
Query: 258 GVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAK---- 313
G G GG E + G ++ + G GG G + ++R+R +E D ++
Sbjct: 19 GGGGGGGGGRGLEAAASGVTEQSNGSRGGGGG----GGAGRRRQREAPALEDDSSRIVST 74
Query: 314 -GGQSSGEAAKDNTENQRK-----GDHKP----SSTGNKSAGKQGKQGSQTSDPPKEEYI 363
GG G+ D+ + K GD+ + T +++A K G Q +PPK++YI
Sbjct: 75 SGGGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYI 134
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
HVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA +LDEIINY+Q+LQR
Sbjct: 135 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQR 194
Query: 424 QVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVY 472
QVEFLSMKL VN ++ IE KD + L F P P Y
Sbjct: 195 QVEFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNTAPGLTFDPQTPREY 243
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 100/199 (50%), Positives = 125/199 (62%)
Query: 280 PSAVEGTGG------EPSAKGLSSKKRKR--NGQDIEFDQAKGGQSSGEAAKDNTENQRK 331
P GTG + K + KK+K N D+ + + E +T++ +K
Sbjct: 82 PETTLGTGNFKKRKFDTETKDCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKK 141
Query: 332 GDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERM 391
HK N + K T + K +YIHVRARRGQAT+SHS+AERVRREKISERM
Sbjct: 142 MKHKAKKEENNFSNDSSKV---TKELEKTDYIHVRARRGQATDSHSIAERVRREKISERM 198
Query: 392 KFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
KFLQDLVPGC K+TGKA MLDEIINYVQSLQRQ+EFLSMKLA VNPR DF+++++ AK+V
Sbjct: 199 KFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV 258
Query: 452 LQSRAGPSSTLGFSPDMPL 470
A T+ SP+M L
Sbjct: 259 ----ASTPMTVVPSPEMVL 273
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 108/267 (40%), Positives = 143/267 (53%)
Query: 260 GASGGDSDEA-EFSGGGGQDEPSAVEGTGGEPSAKGLSSK--KRKRNGQDIEFDQAKGGQ 316
G+ GG+ A E S G G AKG S+ KR+R Q + Q
Sbjct: 57 GSLGGEPPLAPEASNGSGSSGGGGSFRKRRPDDAKGESNSICKRQRGKQQQQQQPCHPDQ 116
Query: 317 SSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSH 376
+ K E R G K + + + T+ K +YIHVRARRGQAT+SH
Sbjct: 117 MAAAVGKGRPERARPGAKKKAEVASPKDSPATSASTVTAGQ-KTDYIHVRARRGQATDSH 175
Query: 377 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 436
SLAERVRRE+ISERM++LQ+LVPGC+KVTGKA MLDEIINYVQSLQ+QVEFLSMK+A N
Sbjct: 176 SLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASN 235
Query: 437 PRLDFNI-EELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSD 495
P ++FNI E+L + + Q+ P++ + M V P Q + G+
Sbjct: 236 PVVNFNIVEDLFGRQLSQAACNPAALPAMALPMAQVEPSCLQMSP--LQQMQTSAGSSGY 293
Query: 496 ILRRTINSQLTPMTGGFKEPSQVSFYP 522
L +++Q +P G P+ S P
Sbjct: 294 GLEMVVSNQYSPPGGPMSVPAGASVEP 320
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 96/190 (50%), Positives = 123/190 (64%)
Query: 266 SDEAEFSGGGGQDEPSAVEGTGGE-PSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKD 324
SD + + S G G E P++ L++ K +G++ GG G+ +K
Sbjct: 104 SDRVHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGEN-------GGSKGGKRSKQ 156
Query: 325 NTENQRK-GDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVR 383
+ K G K S G+ K ++ + PK+ YIHVRARRGQAT+SHSLAER R
Sbjct: 157 DVAGSSKNGVEKCDSKGDN------KDDAKPPEAPKD-YIHVRARRGQATDSHSLAERAR 209
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI 443
REKISERM LQDLVPGC+++TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR++FN
Sbjct: 210 REKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNA 269
Query: 444 EELLAKDVLQ 453
L+ +++Q
Sbjct: 270 NASLSTEMIQ 279
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 419 (152.6 bits), Expect = 1.8e-38, P = 1.8e-38
Identities = 96/199 (48%), Positives = 134/199 (67%)
Query: 305 QDIEFDQA-KGGQ--SSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEE 361
+++ D+ KG + SGE + + G+ + AG+ K G +D +EE
Sbjct: 569 RNMSIDKCLKGSKRKGSGEGSSSLHSQEETGEMPQRELSMEHAGE--KAGD--ADASREE 624
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
Y+HVRA+RGQATNSHSLAER RREKI+ERMK LQDLVPGC+K+TGKA+MLDEIINYVQSL
Sbjct: 625 YVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSL 684
Query: 422 QRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQS-QA 480
QRQVEFLSMKL+T++P L+ +++ +D+L S+ S+ LG SP + +P ++++ Q
Sbjct: 685 QRQVEFLSMKLSTISPELNSDLD---LQDILCSQDARSAFLGCSPQLSNAHPNLYRAAQQ 741
Query: 481 GLMHGALPG---MGNPSDI 496
L L G + NP+D+
Sbjct: 742 CLSPPGLYGSVCVPNPADV 760
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 370 (135.3 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 79/135 (58%), Positives = 96/135 (71%)
Query: 326 TENQRKGDHKPSSTGNKSA-GKQGKQGSQTSDP-PKEEYIHVRARRGQATNSHSLAERVR 383
TE + K K S GK ++TS K +YIHVRARRG+AT+ HSLAER R
Sbjct: 100 TEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERAR 159
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI 443
REKIS++MK LQD+VPGC+KVTGKA MLDEIINYVQSLQ+QVEFLSMKL+ +NP L+ +I
Sbjct: 160 REKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHI 219
Query: 444 EELLAKDVLQSRAGP 458
++L AK GP
Sbjct: 220 DDLSAKQFQAYFTGP 234
Score = 41 (19.5 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 221 VSKDASLSVE----HGASNGSTLKNERKGESLVNSHGEAK 256
+S+ +S +E +G S TL+N+RK E + K
Sbjct: 68 ISRTSSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKK 107
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 93/201 (46%), Positives = 119/201 (59%)
Query: 258 GVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEF----DQAK 313
GV ++ GDS F G + G+P+ + + G + D++K
Sbjct: 25 GV-STAGDSSRRSFVGPNQFGDADLTTAANGDPARMSHALSQAVIEGISGAWKRREDESK 83
Query: 314 GGQSSGEAAKDNTENQR-KGDHKPSSTGN-KSAGKQGKQGSQTSDPPKEEYIHVRARRGQ 371
+ EN+R K D +S G + +Q Q +P K+ YIHVRARRGQ
Sbjct: 84 SAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKD-YIHVRARRGQ 142
Query: 372 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 431
AT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMK
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 202
Query: 432 LATVNPRLDFNIEELLAKDVL 452
L VN R++ IE K+V+
Sbjct: 203 LEAVNSRMNPGIEVFPPKEVM 223
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 98/195 (50%), Positives = 121/195 (62%)
Query: 283 VEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSS-GEAAKDNTENQRKGDH-KPSSTG 340
V+ T S K ++ K G DQ G S+ K R ++ K G
Sbjct: 57 VDKTENSGSEKLANTTKTATTGSS-SCDQLSHGPSAITNTGKTRGRKARNSNNSKEGVEG 115
Query: 341 NKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 400
KS K+ K+GS+ +PP + YIHVRARRGQAT+SHSLAERVRREKISERM+ LQ+LVPG
Sbjct: 116 RKS--KKQKRGSK-EEPPTD-YIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPG 171
Query: 401 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL-DFNIEELLAKDVLQSRAG-P 458
C KVTGKA+MLDEIINYVQ+LQ QVEFLSMKL +++P + DF + L +LQS G P
Sbjct: 172 CDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVYDFGSD--LDGLILQSEMGSP 229
Query: 459 SSTLGFSPDMPLVYP 473
F+ MP P
Sbjct: 230 EVGTSFTNAMPTTTP 244
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 85/173 (49%), Positives = 111/173 (64%)
Query: 275 GGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRK--- 331
G +D +A E T + +A S K R N +D + + SSG K++ + +RK
Sbjct: 54 GNKDVSAAEESTVTDLTAGWGSRKTRDLNSED-DSSKMVSSSSSGNELKESGDKKRKLCG 112
Query: 332 -----GDHKPSSTGNKSAGKQGKQGSQTS---DPPKEEYIHVRARRGQATNSHSLAERVR 383
GD G S+G G + ++ +PPK+ YIHVRARRGQAT+ HSLAER R
Sbjct: 113 SESGNGDGSMRPEGETSSGGGGSKATEQKNKPEPPKD-YIHVRARRGQATDRHSLAERAR 171
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 436
REKISE+M LQD++PGC+K+ GKA++LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 172 REKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVN 224
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 78/143 (54%), Positives = 102/143 (71%)
Query: 310 DQAKGGQSSGEAAKDNTENQR--KGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRA 367
D+ K + ++ +N +NQ G K KS+ K+ K S SD K Y+HVRA
Sbjct: 132 DRVKAEPAETDSMVEN-QNQSYSSGKRKEREKKVKSSTKKNKS-SVESD--KLPYVHVRA 187
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RRGQAT++HSLAER RREKI+ RMK LQ+LVPGC K+ G A++LDEIIN+VQ+LQRQVE
Sbjct: 188 RRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEM 247
Query: 428 LSMKLATVNPRLDFNIEELLAKD 450
LSM+LA VNPR+DFN++ +LA +
Sbjct: 248 LSMRLAAVNPRIDFNLDSILASE 270
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 97/235 (41%), Positives = 125/235 (53%)
Query: 244 KGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRN 303
+ S+V G +G G SG ++ G D+ S V T G
Sbjct: 22 EASSVVTDQGSGSRGGGGSGRRRPRSD--AGPEDDDLSKVVSTSAASGGGG-------GG 72
Query: 304 GQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYI 363
GQD + +AK + + K+++ G + +GN S K + + +PPK++YI
Sbjct: 73 GQDSDAPEAKRLKPMKSSDKNDSLRTEAG----TDSGNSS--KAADKNATPPEPPKQDYI 126
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
HVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA +LDEIINY+QSLQ
Sbjct: 127 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQH 186
Query: 424 QVEF------------LSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSP 466
QVEF LSMKL VN + I +KD ++ L F P
Sbjct: 187 QVEFMFKYLIELFLQFLSMKLEAVNSHMINGIVAFPSKDFGAQPYNTAAGLTFDP 241
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 333 (122.3 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 73/126 (57%), Positives = 88/126 (69%)
Query: 337 SSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 396
+ TG+ GK+ K+ + D + E +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD
Sbjct: 117 TETGSLRRGKRLKKKKEEEDEKEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQD 176
Query: 397 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRA 456
+VPGC K G A MLDEIINYVQSLQ QVEFLSMKL + DFN E A D +Q RA
Sbjct: 177 MVPGCYKAMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSFYDFN-SETDAVDSMQ-RA 234
Query: 457 GPSSTL 462
T+
Sbjct: 235 KARETV 240
Score = 37 (18.1 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 137 PGMFPQSLSQFPADSAFI 154
PG P S + F + S+F+
Sbjct: 63 PGNSPDSSNNFSSTSSFL 80
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 342 (125.4 bits), Expect = 6.2e-31, P = 6.2e-31
Identities = 75/112 (66%), Positives = 89/112 (79%)
Query: 346 KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 405
K+ K+ + +PP YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVT
Sbjct: 163 KKAKEAAG-GEPPAG-YIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVT 220
Query: 406 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL-DFNIEELLAKDVLQSRA 456
GKA+MLDEII+YVQSLQ QVEFLSMKLA+++P + +F + DVL+ A
Sbjct: 221 GKALMLDEIISYVQSLQNQVEFLSMKLASLSPLMYEFGPGIDMHPDVLRQLA 272
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 340 (124.7 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 81/193 (41%), Positives = 114/193 (59%)
Query: 280 PSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSST 339
PS ++ E S+ +KKRK + + ++ S + + + G+ ST
Sbjct: 70 PSNIQNN--EESSSQFDTKKRKSLMEAVS--TSENSVSDQTLSTSSAQVSINGN---IST 122
Query: 340 GNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVP 399
N S+ ++GK+ + + E +HVRARRGQAT+SHS+AERVRR KI+ER+K LQD+VP
Sbjct: 123 KNNSS-RRGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVP 181
Query: 400 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPS 459
GC K G A MLDEIINYVQSLQ QVEFLSMKL + DFN E + + +++A +
Sbjct: 182 GCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQKAKAREA 241
Query: 460 STLGFSPDMPLVY 472
+G D V+
Sbjct: 242 VEMGQGRDGSSVF 254
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 317 (116.6 bits), Expect = 4.7e-28, P = 4.7e-28
Identities = 67/128 (52%), Positives = 90/128 (70%)
Query: 329 QRKGDHKPSSTGNK---SAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRRE 385
+RKG+ + S + + S ++ G +T P ++ +HVRA+RGQAT+SHSLAERVRRE
Sbjct: 67 RRKGNKEESGSKRRRKRSEEEEAMNGDETQKP--KDVVHVRAKRGQATDSHSLAERVRRE 124
Query: 386 KISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEE 445
KI+ER+K LQDLVPGC K G AVMLD II+YV+SLQ Q+EFLSMKL+ + D N +
Sbjct: 125 KINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLD 184
Query: 446 LLAKDVLQ 453
+ D+ Q
Sbjct: 185 IEPTDIFQ 192
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 211 (79.3 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 44/79 (55%), Positives = 52/79 (65%)
Query: 327 ENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREK 386
+N R G K KS+ K+ K + P Y+HVRARRGQAT+SHSLAER RREK
Sbjct: 169 QNNRNGKRKDFEKKGKSSTKKNKSSEENEKLP---YVHVRARRGQATDSHSLAERARREK 225
Query: 387 ISERMKFLQDLVPGCSKVT 405
I+ RMK LQ+LVPGC K T
Sbjct: 226 INARMKLLQELVPGCDKGT 244
Score = 170 (64.9 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 35/60 (58%), Positives = 48/60 (80%)
Query: 395 QDLVPGCS----KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
+DL+ CS ++ G A++LDEIIN+VQSLQRQVE LSM+LA VNPR+DFN++ +LA +
Sbjct: 278 EDLID-CSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 336
Score = 64 (27.6 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 33/119 (27%), Positives = 50/119 (42%)
Query: 147 FPADSAFIERAARFSSFS----GGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNG 202
FP++S +ERAARFS + GN T P + + R + P E +
Sbjct: 96 FPSNSVLMERAARFSVIATEQQNGNISGETPTSSVPSNSSA-NLDRVKTE-PAETDSSQR 153
Query: 203 LKSLSGGQSQ---KNEMNVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQG 258
L S S ++Q N+ N KD + G S+ K+ + E L H A++G
Sbjct: 154 LISDSAIENQIPCPNQNNRNGKRKDFE---KKGKSSTKKNKSSEENEKLPYVHVRARRG 209
Score = 47 (21.6 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 299 KRKRNGQDIEFDQAKGGQSSGEAAKDNTENQR 330
+ RNG+ +F+ K G+SS + K + EN++
Sbjct: 169 QNNRNGKRKDFE--KKGKSSTKKNKSSEENEK 198
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 244 (91.0 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 62/116 (53%), Positives = 76/116 (65%)
Query: 334 HKPSSTGNKSAGKQ-G--KQG--SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKIS 388
H P +G + G Q G QG S TS P + VRARRGQAT+ HS+AER+RRE+I+
Sbjct: 63 HHPQESGGPTMGSQEGLQPQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIA 122
Query: 389 ERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK----LATVNPRLD 440
ERMK LQ+LVP +K T KA MLDEII YV+ LQ QV+ LSM +V PRL+
Sbjct: 123 ERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLN 177
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 232 (86.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 67/169 (39%), Positives = 93/169 (55%)
Query: 264 GDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAK 323
G +E GG G P+ G + GLS + K G F + +GG SG+
Sbjct: 56 GSGEEGSHMGGLGGSGPT---GFHNQMFPLGLSLDQGKGPG----FLRPEGGHGSGKRFS 108
Query: 324 DNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIH--VRARRGQATNSHSLAER 381
D+ + R KP G Q Q S P + I VRARRGQAT+ HS+AER
Sbjct: 109 DDVVDNRCSSMKPVFHG------QPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAER 162
Query: 382 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+ L+ QV+ LSM
Sbjct: 163 LRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQVKVLSM 210
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 217 (81.4 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 48/86 (55%), Positives = 63/86 (73%)
Query: 346 KQGKQGSQTSDP-PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
+Q KQG P P VRARRGQAT+ HS+AER+RRE+I+ERM+ LQ+LVP +K
Sbjct: 113 QQSKQGGAAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK- 171
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSM 430
T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 172 TDRAAMLDEILDYVKFLRLQVKVLSM 197
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 219 (82.2 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 53/102 (51%), Positives = 68/102 (66%)
Query: 334 HKPSSTGNKS-----AGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKIS 388
H P +G ++ A G T+ P + VRARRGQAT+ HS+AER+RRE+I+
Sbjct: 96 HLPQGSGGQTQTQSQATASATTGGATAQPQTKP--KVRARRGQATDPHSIAERLRRERIA 153
Query: 389 ERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
ERMK LQ+LVP +K T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 154 ERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSM 194
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 223 (83.6 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 65/154 (42%), Positives = 87/154 (56%)
Query: 316 QSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNS 375
Q SG N + Q + +P ++ + + G G+ + PP+ +RARRGQAT+
Sbjct: 97 QGSGGGLM-NQQGQTQTQTQPQASASTATG-----GTVAA-PPQSR-TKIRARRGQATDP 148
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 435
HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 207
Query: 436 NPRLDFNIEELLAKDVLQSRA--GPSSTLGFSPD 467
+ I E S A G S T G S D
Sbjct: 208 AASVSSQISEAGGSHGNASSAMVGGSQTAGNSND 241
Score = 37 (18.1 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 15/45 (33%), Positives = 18/45 (40%)
Query: 64 VDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASL 108
VDS NQ I P N S + + A S I +GS L
Sbjct: 59 VDSRNQPIMMMPLNDGSSVHALYNGFSVAGSLPNFQIPQGSGGGL 103
>UNIPROTKB|Q69WX7 [details] [associations]
symbol:P0417G12.19 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 GO:GO:0005634 Gene3D:4.10.280.10
EMBL:AP003626 EMBL:AP003711 EMBL:AK070970
EnsemblPlants:LOC_Os06g41060.1 OMA:KNGMDLE Uniprot:Q69WX7
Length = 154
Score = 201 (75.8 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 38/51 (74%), Positives = 48/51 (94%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
M+ L++LVPGCSKV+G A++LDEIIN+VQSLQRQVE+LSM+LA VNPR+DF
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 51
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 211 (79.3 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 66/186 (35%), Positives = 97/186 (52%)
Query: 251 SHGEAKQGVGASGGDSDEAEFSGG--GGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIE 308
S G G+G G + G G + A+ G GG P G ++ +
Sbjct: 34 SSGSGLSGIGGVGPPPMMLQLGSGNEGNHNHMGAIGG-GG-PV--GFHNQMFPLG---LS 86
Query: 309 FDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDP-PKEEYI---H 364
DQ KG G D T + + D + + G+ SQ + P P ++
Sbjct: 87 LDQGKG---HGFLKPDETGKRFQDDVLDNRCSSMKPIFHGQPMSQPAPPMPHQQSTIRPR 143
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 202
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 203 VKVLSM 208
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 221 (82.9 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 52/85 (61%), Positives = 62/85 (72%)
Query: 346 KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 405
K GS + PK VRARRGQAT+ HS+AER+RREKIS+RMK LQ+LVP +K T
Sbjct: 298 KGNGSGSAGNGAPKPR---VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-T 353
Query: 406 GKAVMLDEIINYVQSLQRQVEFLSM 430
KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 354 NKASMLDEIIDYVKFLQLQVKVLSM 378
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 217 (81.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 49/92 (53%), Positives = 65/92 (70%)
Query: 337 SSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 396
+S G + + G G PP++ VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+
Sbjct: 225 ASGGGAAQPQAGAAGGGAPAPPRQR---VRARRGQATDPHSIAERLRRERIAERMKALQE 281
Query: 397 LVPGCSKV--TGKAVMLDEIINYVQSLQRQVE 426
LVP +K+ T KA MLDEII+YV+ LQ QV+
Sbjct: 282 LVPNANKLMQTDKASMLDEIIDYVKFLQLQVK 313
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 213 (80.0 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 77/213 (36%), Positives = 101/213 (47%)
Query: 267 DEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNT 326
D EF GG V G A GL + ++++N ++I G
Sbjct: 140 DSKEFLNGGSIPSFGTVLQALG---AGGLKAAQQEQNIRNIPLPTFTSGSHLAVTDAQGP 196
Query: 327 ENQRK-----GDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAER 381
K DH N S+ + + S + + RARRGQAT+ HS+AER
Sbjct: 197 PLPSKIPPLIHDHNSEYPINHSSDVEPQANSAPGNSANAKP-RTRARRGQATDPHSIAER 255
Query: 382 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM-KLATVNPRLD 440
+RREKISERMK LQ LVP +K KA MLDEII+YV+ LQ QV+ LSM +L L
Sbjct: 256 LRREKISERMKNLQVLVPNSNKAD-KASMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLP 314
Query: 441 FNIEELLAKDVLQSRAGPS---STLGFSP-DMP 469
LL + + + PS ST+ P DMP
Sbjct: 315 -----LLRESQTECHSNPSLSASTISQGPPDMP 342
>UNIPROTKB|Q6Z1F9 [details] [associations]
symbol:OSJNBa0033D24.39 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 GO:GO:0005634
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005439
EMBL:AP004464 RefSeq:NP_001062365.1 UniGene:Os.89290 GeneID:4346166
KEGG:osa:4346166 Uniprot:Q6Z1F9
Length = 143
Score = 185 (70.2 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 36/49 (73%), Positives = 44/49 (89%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
M+ LQ LVPGC KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVL 49
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 186 (70.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 57/157 (36%), Positives = 83/157 (52%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 427 FLSMKLAT-VNPR-LDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMH 484
LSM+ +NP L +E A + + G + T+ P V PPV+QS +G H
Sbjct: 158 MLSMRNGVYLNPSYLSGALEPAQASQMFAALGGNNVTV-VHPGT--VMPPVNQS-SGAHH 213
Query: 485 --GAL--PGMGNPSDILRRTINSQLTPMTGGFKEPSQ 517
L P P ++ ++ S P E SQ
Sbjct: 214 LFDPLNSPPQNQPQSLILPSVPSTAIPEPPFHLESSQ 250
Score = 46 (21.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 17/43 (39%), Positives = 18/43 (41%)
Query: 260 GASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKR 302
G GG D S GG EP A G P +G S KR R
Sbjct: 69 GELGGFCD----SEAGGSSEPEAA--AGARP--RGGSGSKRSR 103
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 174 (66.3 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 45/107 (42%), Positives = 64/107 (59%)
Query: 340 GNKSAGKQGKQGSQTSDPPKEEYIH------VRARRGQATNSHSLAERVRREKISERMKF 393
G +S+G+ S SD E + VRA+RG AT+ S+AERVRR +IS+R++
Sbjct: 153 GEQSSGQVPTGVSSMSDMNMENLMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRK 212
Query: 394 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS--MKLATVNPR 438
LQ+LVP K T A ML+E + YV+ LQRQ++ L+ K T P+
Sbjct: 213 LQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKRCTCIPK 259
Score = 49 (22.3 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 259 VGASGGDSDEAEFSGGGG 276
VG+SGG D GGGG
Sbjct: 6 VGSSGGGDDGGGRGGGGG 23
Score = 42 (19.8 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 12/25 (48%), Positives = 12/25 (48%)
Query: 272 SGGGGQDEPSAVEGTGGEPSAKGLS 296
S GGG D G GG S GLS
Sbjct: 8 SSGGGDD--GGGRGGGGGLSRSGLS 30
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 185 (70.2 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 60/184 (32%), Positives = 94/184 (51%)
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
GS S+ P R +R +A H+L+E+ RR +I+E+MK LQ L+P SK T KA M
Sbjct: 13 GSSESEQPTRP-ARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASM 70
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFN-IEELLAKDVLQSRAGPSSTLGFSPDMP 469
LD+ I Y++ LQ QV+ LSM+ P ++ + E L + Q A + D
Sbjct: 71 LDDAIEYLKQLQLQVQMLSMRNGLYLPPVNLSGAPEHLP--IPQMSAALDQNSAKASDPS 128
Query: 470 LVYPPVHQSQAGLM-------HGAL--PGMGNPSDILRRTI--NSQLTPMTGGFKEPSQV 518
+V PV+Q+ L+ H L PG+ N + + R + +S+ + F EP+++
Sbjct: 129 VVLQPVNQTSGALLPFELASQHKPLFLPGVPNATALEPRFLVESSRSNLQSLRFTEPAEM 188
Query: 519 SFYP 522
YP
Sbjct: 189 -IYP 191
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 69/255 (27%), Positives = 120/255 (47%)
Query: 275 GGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDH 334
G + +A+ G + GL R G+++ + A G S K TE +
Sbjct: 271 GTESRAAAITGVSRTFAVPGLG-----RRGKEVATETA--GTSYSGVNKAETERVQI--- 320
Query: 335 KPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFL 394
+P + K+ ++ +E + +R +A + H+L+ER RRE+I+ERMK L
Sbjct: 321 QPERETKITEDKKREETIAEIQGTEEAHGSTSRKRSRAADMHNLSERRRRERINERMKTL 380
Query: 395 QDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL-DFNIEELLAKDVLQ 453
Q+L+P C K T K ML+++I YV+SLQ Q++ +SM + P + + N ++ + +
Sbjct: 381 QELLPRCRK-TDKVSMLEDVIEYVKSLQLQIQMMSMGHGMMPPMMHEGNTQQFMPHMAMG 439
Query: 454 SRAGPSSTLGFSPDMPLVYP-PVHQSQAGLMHGAL--PGMGNP-SDILRRTINS-QLTPM 508
+ G + F P +P P H + G + AL P SD+ R + S P+
Sbjct: 440 MK-GMNRPPPFVPFPGKTFPRPGHMAGVGPSYPALRYPFPDTQASDLSRVHVPSLHSNPV 498
Query: 509 TGGFKEPSQVSFYPQ 523
+ P+ ++ Y Q
Sbjct: 499 PNQPRFPAYINPYSQ 513
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 166 (63.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 425 VEFLS 429
V+ L+
Sbjct: 129 VKGLN 133
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 184 (69.8 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 84/292 (28%), Positives = 135/292 (46%)
Query: 241 NERKGES-LVNSHGEAKQGVGASGGDSDEAEFSGGG------GQDEPSAVEGTGGEPSAK 293
N R GES + S ++ S + A S G G D SAV G GG + K
Sbjct: 157 NGRGGESGPLLSKAVVRESTQVSPSATPSAAASESGLTRRTDGTDS-SAVAG-GGAYNRK 214
Query: 294 GLSSKKRKRNGQDIEFDQAKGG---QSSGEAAKDNTENQRKGDHKPSSTGN-KSAGKQGK 349
G K IE +S E K N +++++ + + ++T +S ++ K
Sbjct: 215 G---KAVAMTAPAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETK 271
Query: 350 QGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 409
Q ++ K R +A H+L+ER RR++I+ERMK LQ+L+P C+K + KA
Sbjct: 272 QARVSTTSTK---------RSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKAS 321
Query: 410 MLDEIINYVQSLQRQVEFLSM---KLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSP 466
MLDE I Y++SLQ Q++ +SM + + P + + + + P S + F P
Sbjct: 322 MLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQYMPHMAMGMGMNQPIPPPSFMPF-P 380
Query: 467 DMPLVYPPVHQSQAGLMHGALPGMG-NPSDILRRTI-NSQLTPMTGGFKEPS 516
+M P+ +Q M G+ P + SD R + N Q P +G + P+
Sbjct: 381 NMLAAQRPL-PTQTH-MAGSGPQYPVHASDPSRVFVPNQQYDPTSGQPQYPA 430
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 166 (63.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A ML+E + YV++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 425 VEFLS 429
++ L+
Sbjct: 241 IQELT 245
Score = 42 (19.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 30/109 (27%), Positives = 51/109 (46%)
Query: 125 SMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAAR-----FSSFS-GGNFCDMMNTFGTP 178
S ++ G++ + G F + S PAD F+ + FS+F N+ D ++T
Sbjct: 80 SSVEQGLYNHHQGGGFHRQNSS-PAD--FLSGSGSGTDGYFSNFGIPANY-DYLSTNVDI 135
Query: 179 EPTGLYSRGRGMMQGPQEVFAGNGLKS--LSGGQSQKNEMNVAEVSKDA 225
PT R R M + F+ LK +SGG S +MN+ ++ +D+
Sbjct: 136 SPT---KRSRDM----ETQFSSQ-LKEEQMSGGISGMMDMNMDKIFEDS 176
Score = 41 (19.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 13/25 (52%), Positives = 13/25 (52%)
Query: 272 SGGGGQDEPSAVEGTGGEPSAKGLS 296
SGGGG G GGE S GLS
Sbjct: 11 SGGGG--------GGGGEVSRSGLS 27
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 175 (66.7 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 53/143 (37%), Positives = 74/143 (51%)
Query: 289 EPSA--KGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGK 346
+PS+ LSS KR+ F A+ G+S + K SST +
Sbjct: 209 DPSSFIDNLSSLKREAEDDGKLFLGAQNGESGNRM---QLLSHHLSLPKSSSTASDMVSV 265
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
Q S P K +RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T
Sbjct: 266 DKYLQLQDSVPCK-----IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTN 320
Query: 407 KAVMLDEIINYVQSLQRQVEFLS 429
+ MLD ++Y++ LQRQ + L+
Sbjct: 321 TSDMLDLAVDYIKDLQRQYKILN 343
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 153 (58.9 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR ++ H+ +ER RR++I+E++K LQ+L+P C+K T K MLDE I+Y++SLQ Q++
Sbjct: 10 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQM 68
Query: 428 LSM 430
L M
Sbjct: 69 LVM 71
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 170 (64.9 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 70/229 (30%), Positives = 109/229 (47%)
Query: 217 NVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGG 276
N S +AS S + SN S++ + E S GV +S D + G
Sbjct: 54 NPCYYSCNAS-STAYSNSNASSIPAPSEYEGYCFSDSNEALGVSSSIAPHDLSMVQVQGA 112
Query: 277 QDE----PS-AVEGTG-GEPSAKGLSS----KKRKRNGQDIEFD-QAKGGQSSGEAAKDN 325
+ P+ +++ G GE + L S KRK++ + EFD Q +G + + +A
Sbjct: 113 TEFLNVIPNHSLDSFGNGELGHEDLDSVSGTNKRKQSAEG-EFDGQTRGSKCARKAEPKR 171
Query: 326 TENQRKGDHKPSST----GNKSAGKQGKQGSQ-TSDPPKEEYIHVRARRGQATNSHSLAE 380
+ ++ K +S G+ S SQ +D RA RG AT+ SL
Sbjct: 172 AKKAKQTVEKDASVAIPNGSCSISDNDSSSSQEVADAGATSKGKSRAGRGAATDPQSLYA 231
Query: 381 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
R RRE+I+ER+K LQ+LVP +KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 232 RKRRERINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQIKLLS 279
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 172 (65.6 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 44/136 (32%), Positives = 74/136 (54%)
Query: 304 GQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYI 363
G+ + + A G QS G + QR+ + T + K ++ + + +E
Sbjct: 212 GKAVAIETA-GTQSWGLCKAETEPVQRQPATETDITDERKR-KTREETNVENQGTEEARD 269
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
++R +A H L+ER RR+KI+E MK LQ+L+P C+K T ++ MLD++I YV+SLQ
Sbjct: 270 STSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQS 328
Query: 424 QVEFLSMKLATVNPRL 439
Q++ SM + P +
Sbjct: 329 QIQMFSMGHVMIPPMM 344
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 49/148 (33%), Positives = 78/148 (52%)
Query: 295 LSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTEN--------QRKGDHKPSSTGNKSAGK 346
+S R +N ++ D + GG S ++N E RK H + ++ +
Sbjct: 171 VSMSDRSKNVEE-RLDTSSGGSSGCSYGRNNKETVSGTSVTIDRKRKHVMDA--DQESVS 227
Query: 347 QGKQGSQTSDPP----KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCS 402
Q G ++D K RR +A H+L+ER RR++I+ERMK LQ+L+P CS
Sbjct: 228 QSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCS 287
Query: 403 KVTGKAVMLDEIINYVQSLQRQVEFLSM 430
+ T KA +LDE I+Y++SLQ Q++ + M
Sbjct: 288 R-TDKASILDEAIDYLKSLQMQLQVMWM 314
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISERM+ LQDLVP T A MLD + Y++ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 425 VEFL 428
V+ L
Sbjct: 364 VKAL 367
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 165 (63.1 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 34/63 (53%), Positives = 49/63 (77%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+ERMK LQ+L+P CSK T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 428 LSM 430
+ M
Sbjct: 313 MWM 315
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 163 (62.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 48/142 (33%), Positives = 74/142 (52%)
Query: 299 KRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTG------NKSAGKQG---K 349
KR + ++ D +G + GE +N + SST + A + G
Sbjct: 189 KRAQKNVEMSGDNNEGEEEEGETKLKKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGED 248
Query: 350 QGSQTSDPPKEEYIH--VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGK 407
S+ DP K ++ RA RG AT+ SL R RRE+I+ER++ LQ+LVP +KV
Sbjct: 249 SSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-I 307
Query: 408 AVMLDEIINYVQSLQRQVEFLS 429
+ ML+E ++YV+ LQ Q++ LS
Sbjct: 308 STMLEEAVHYVKFLQLQIKLLS 329
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 165 (63.1 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 52/145 (35%), Positives = 76/145 (52%)
Query: 282 AVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGN 341
A EGT S L++ R G+ + + A G SSG K TE + +P+ T +
Sbjct: 179 ATEGTASRVSGT-LAAHDLGRKGKAVAVEAA-GTPSSG-VCKAETEPVQI---QPA-TES 231
Query: 342 KSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 401
K ++ G++ E +R + H+LAER RREKI+E+MK LQ L+P C
Sbjct: 232 KLKAREETHGTE------EARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRC 285
Query: 402 SKVTGKAVMLDEIINYVQSLQRQVE 426
+K T K LD+ I YV+SLQ Q++
Sbjct: 286 NKST-KVSTLDDAIEYVKSLQSQIQ 309
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 166 (63.5 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R ++ H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 397
Query: 427 FLSM 430
+SM
Sbjct: 398 IMSM 401
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 161 (61.7 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV-E 426
+R +A H+LAER RREKI+ERMK LQ L+P C+K T K ML+++I YV+SL+ Q+ +
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQINQ 205
Query: 427 FL 428
F+
Sbjct: 206 FM 207
Score = 37 (18.1 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 280 PSAVEGTGGEPSAKGLSSKKRKR 302
P + G A+G +S+KR R
Sbjct: 128 PRSAPRIQGTEEARGSTSRKRSR 150
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 156 (60.0 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 55/170 (32%), Positives = 87/170 (51%)
Query: 267 DEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNT 326
D F G + P+ ++ + SS KRK D+E + K + ++
Sbjct: 65 DMFPFGAMPGGNLPAMLDSWDQSHHLQETSSLKRKL--LDVE-NLCKTNSNCDVTRQELA 121
Query: 327 ENQRKGD-HKPSSTGNKSAGK--QGKQGSQTSDPPKEEYIHV----RARRGQATNSHSLA 379
++++K S+T ++S G+ S +SD K V RA +G AT+ SL
Sbjct: 122 KSKKKQRVSSESNTVDESNTNWVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLY 181
Query: 380 ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
R RREKI+ER+K LQ+LVP +KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 182 ARKRREKINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQIKLLS 230
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 57/196 (29%), Positives = 85/196 (43%)
Query: 312 AKGGQSSGEAAKDN-----TENQRKGDHKP---SSTGNKSAGKQGKQGSQTSDPPKEEYI 363
A GG S EA D +++ D+ P S T NK G + K
Sbjct: 15 AAGGWLSPEAGDDRRAAPPAPEKKQMDNMPAVASPTMNKDEASDDS-GERKKKKKKASSA 73
Query: 364 HVRARRGQ-ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
+A R + A +H+L E+ RR KI+ER + LQ LVPGC + +A LD+ I Y++SLQ
Sbjct: 74 AGKASRHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQ 133
Query: 423 RQVEFLSMKLATVNPRLDFNIEELL-AKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAG 481
Q+E S A +P + + + A P G + + + P A
Sbjct: 134 HQLEATS---AVGSPAAAVLYPAAVHPQSYMHPPAPPPPVAGAAAPVTMAPMPAGMVLAA 190
Query: 482 LMHGALPGMGNPSDIL 497
GA P G P+ ++
Sbjct: 191 APPGAAPPPGPPATMM 206
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 41/106 (38%), Positives = 61/106 (57%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
V +R +A H+ +ER RR+KI++RMK LQ LVP SK T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 425 VEFLS-MKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMP 469
V +S M + ++ + ++ L ++ + G LG MP
Sbjct: 266 VSMMSRMNMPSMMLPMAMQQQQQLQMSLMSNPMG----LGMGMGMP 307
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 160 (61.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 30/63 (47%), Positives = 48/63 (76%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y+++LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 367
Query: 428 LSM 430
+SM
Sbjct: 368 MSM 370
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 162 (62.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 39/104 (37%), Positives = 63/104 (60%)
Query: 337 SSTGNKSAGKQGKQG-----SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERM 391
S +G+ K+G++ S+ +D + RR +A H+L+ER RR++I+E++
Sbjct: 189 SGSGSYPLFKRGREELVDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKL 248
Query: 392 KFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 435
+ LQ+LVP C+K T KA +LDE I Y++SLQ QV+ + M V
Sbjct: 249 RALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQIMWMTTGIV 291
Score = 37 (18.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 269 AEFSGGGGQDEPSAVEGTG 287
A+ GGGG D+ + G G
Sbjct: 69 ADGGGGGGGDDDALGLGMG 87
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 157 (60.3 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 57/177 (32%), Positives = 86/177 (48%)
Query: 355 SDPPKEEYIHVRAR-----RGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 409
SD K + +H R R R ++T H L ER RR++ +++M+ LQDL+P C K KA
Sbjct: 209 SDDAKTQ-VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKAS 266
Query: 410 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMP 469
+LDE I Y+++LQ QV+ +SM + P + L G ++T P
Sbjct: 267 LLDEAIKYMRTLQLQVQMMSMGNGLIRPPTMLPMGHYSPMG-LGMHMGAAATPTSIPQ-- 323
Query: 470 LVYPPVHQSQAGL--MHGALPGM----GNPSDILRRT-INSQLTPMTGGFKEPSQVS 519
+ P++ G M+ A P M +PS ++ T I S L + F PS VS
Sbjct: 324 --FLPMNVQATGFPGMNNAPPQMLSFLNHPSGLIPNTPIFSPLENCSQPFVVPSCVS 378
Score = 41 (19.5 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 32/193 (16%), Positives = 71/193 (36%)
Query: 152 AFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQS 211
A I R SF +++ + T G + + ++ G +V + K ++
Sbjct: 43 AKIRRPKNNGSFQKQRRQSLLDLYETEYSEG-FKKNIKIL-GDTQVVPVSQSKPQQDKET 100
Query: 212 QKNEMNVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEF 271
+ N + K + + E S + + +L++ + + V + DE
Sbjct: 101 NEQMNNNKKKLKSSKIEFERNVSKSNKCV---ESSTLIDVSAKGPKNVEVTTAPPDEQSA 157
Query: 272 SGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQ-R 330
+ G + A +++ LS KR DIE +++ ++ + D+ + Q
Sbjct: 158 AVGRSTELYFASSSKFSRGTSRDLSCCSLKRKYGDIEEEESTYLSNNSDDESDDAKTQVH 217
Query: 331 KGDHKPSSTGNKS 343
KP + +S
Sbjct: 218 ARTRKPVTKRKRS 230
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 154 (59.3 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 35/100 (35%), Positives = 60/100 (60%)
Query: 335 KPSSTGNKSAGKQGKQGSQTSDPPKE---EYIHVRARRGQATNSHSLAERVRREKISERM 391
K + TG++ + G + T +E E RRG+A H+ +ER RR++I++RM
Sbjct: 127 KTARTGDRDYFRSGSETQDTEGDEQETRGEAGRSNGRRGRAAAIHNESERRRRDRINQRM 186
Query: 392 KFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 431
+ LQ L+P SK K +LD++I +++ LQ QV+F+S++
Sbjct: 187 RTLQKLLPTASKAD-KVSILDDVIEHLKQLQAQVQFMSLR 225
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 144 (55.7 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 50/139 (35%), Positives = 71/139 (51%)
Query: 343 SAGKQGKQGSQTSDPPKEEYIHVRARRG-QATNS---------HSLAERVRREKISERMK 392
S G G S+ +++Y R G + NS H+L+E+ RR KI+E+MK
Sbjct: 55 SGGAVSSVGYGVSETGQDKYAFEHKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMK 114
Query: 393 FLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS---------MKLATVNPRLDFNI 443
LQ L+P +K T KA MLDE I Y++ LQ QV+ L+ M+L V P I
Sbjct: 115 ALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLGLNPMRLPQVPPPTHTRI 173
Query: 444 EELLAKDV-LQSR-AGPSS 460
E L +D+ L++ A P S
Sbjct: 174 NETLEQDLNLETLLAAPHS 192
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 151 (58.2 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 70/247 (28%), Positives = 109/247 (44%)
Query: 189 GMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERKGESL 248
G+ Q P +AG G G S + MN + G + ++L + G S
Sbjct: 29 GLDQ-PDAAYAGGG--GGGGSASSSSTMNSDHQQHQGFVFYPSGEDHHNSLM-DFNGSSF 84
Query: 249 VN-SHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDI 307
+N H E+ S G S SGGGG S +EG + G ++ + + I
Sbjct: 85 LNFDHHESFPPPAISCGGS-----SGGGGF---SFLEGNN---MSYGFTNWNHQHHMDII 133
Query: 308 EFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRA 367
+ Q + ++ G S KSAG + +++ P K+ V
Sbjct: 134 SPRSTETPQGQKDWLYSDSTVVTTGSRN-ESLSPKSAGNKRSHTGESTQPSKKLSSGVTG 192
Query: 368 R-RGQATNS----HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
+ + + T S SLA + RRE+ISER+K LQ+LVP +KV ML++ I+YV+ LQ
Sbjct: 193 KTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVD-LVTMLEKAISYVKFLQ 251
Query: 423 RQVEFLS 429
QV+ L+
Sbjct: 252 VQVKVLA 258
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 154 (59.3 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 89/351 (25%), Positives = 140/351 (39%)
Query: 116 LDIGWNPASSM---IKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGG-NFC-D 170
+D W SM I GI P P + S +PA F + AA F + GG N C D
Sbjct: 1 MDEVWCSLDSMPADIAAGIHQPPPPDLHDPSF--WPA---FADCAASFIAGGGGDNACFD 55
Query: 171 MMNTFGTPEPTGLYSR-----GRGMMQGPQE----VFAGNGLKSLSGGQSQKNEMNVAEV 221
+ G+ T + + G G + G E + + + SLS G+S +++
Sbjct: 56 ELMAGGSSGDTRMVAMDDGDDGSGFLVGDAEAEHLMLSSSSPSSLSSGRS----LSIDSA 111
Query: 222 SKDASLSVEHGASNG-STLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEP 280
+S S++ A+ STL V +HG G G GG + +
Sbjct: 112 GSMSSFSLDAAAALAMSTLAVPHPYPPPV-AHGMFASGDGGGGGGGAVDDHEDAIMRAMM 170
Query: 281 SAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDH----KP 336
+ + PS+ G S+ +D GQ + A + G H
Sbjct: 171 AVISSASASPSSSGGSASSPTPFSRDSGAHHQPAGQPAMAAPQQPRGGN--GGHVVVKSS 228
Query: 337 SSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNS----HSLAERVRREKISERMK 392
SS+G + K G +EE A ATNS H ++ER RREK+++
Sbjct: 229 SSSGGLAVPMDQKPGGGGRGRQQEE-----AAAASATNSSQLYHMMSERKRREKLNDSFH 283
Query: 393 FLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI 443
L+ L+P CSK K +L Y++SL+ ++ +L N +L+ +I
Sbjct: 284 TLRSLLPPCSK-KDKTTVLINAAKYLKSLETEIT----ELEGTNTKLEKHI 329
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 152 (58.6 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 41/130 (31%), Positives = 70/130 (53%)
Query: 309 FDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKS-----AGKQGKQGSQTSDPPKEEYI 363
F + GG ++ + N+ R ++GN++ ++G + P +
Sbjct: 130 FGFSGGGNNNN--VQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAVVDEAPSSKSGP 187
Query: 364 HVRA--RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
R+ +R +A H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ L
Sbjct: 188 SSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQL 246
Query: 422 QRQVEFLSMK 431
Q QV+ L+M+
Sbjct: 247 QLQVQMLTMR 256
>DICTYBASE|DDB_G0286885 [details] [associations]
symbol:DDB_G0286885 species:44689 "Dictyostelium
discoideum" [GO:0005615 "extracellular space" evidence=IDA]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0286885
GO:GO:0005615 EMBL:AAFI02000091 eggNOG:NOG12793 RefSeq:XP_637505.1
PRIDE:Q54L58 EnsemblProtists:DDB0187174 GeneID:8625844
KEGG:ddi:DDB_G0286885 OMA:NSEFTTT ProtClustDB:CLSZ2430063
Uniprot:Q54L58
Length = 587
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 60/216 (27%), Positives = 83/216 (38%)
Query: 164 SGGNFCDMMNTFGTPEPTGLYSRGR--GMMQGPQEV---FAGNGLK---SLSGGQSQKNE 215
SGG +T G TG + G G Q E +G G S S Q+ ++
Sbjct: 375 SGGGSGGKTSTSGPHSTTGHQTSGHHTGSSQSGSESGSESSGRGSSQSDSQSDSQASGSQ 434
Query: 216 MNVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGG 275
N +E + S+S H +S G + Q G+SG S F G
Sbjct: 435 SN-SEFTTTGSMSGSHQSSGSQQTSGSMSGSQQTSGQTSGSQQSGSSGSQSTGGSFQTSG 493
Query: 276 GQDEPSAVEGTGGEPSAK--GLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGD 333
S+ + TGG+ S + G S + GQ Q+ GGQSSG++ T Q G
Sbjct: 494 SSGSQSSGQSTGGQSSGQSTGGQSSGQSTGGQTS--GQSTGGQSSGQSTGGQTSGQTSGQ 551
Query: 334 HKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARR 369
+STG S G +T P EY H R+
Sbjct: 552 TSGASTGGSSTTYSGMADFKT---P-FEYKHSNNRK 583
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 143 (55.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 425 VEFL 428
++ L
Sbjct: 343 LQNL 346
Score = 49 (22.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 28/125 (22%), Positives = 50/125 (40%)
Query: 229 VEHGASNGSTLKNERKGESLVNSHGEAKQGVGAS-GGDSDEAEFSGGGGQDEPSAVEGT- 286
+ +G++ GS L N E + A+ G D+ F G + T
Sbjct: 24 IRYGSAPGSFL-NSVVDEVIGGGSSNARDFTGYQPSSDNFIGNFFTGAADSSSLRSDSTT 82
Query: 287 -GGEPSAKG---LSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNK 342
G S+ G L + + +DI D++ GG + E ++ + N G + S+G+
Sbjct: 83 CGVNNSSDGQKQLGNNNNNNSNKDIFLDRSYGGFN--EISQQHKSNDIGGGN---SSGSY 137
Query: 343 SAGKQ 347
S +Q
Sbjct: 138 SLARQ 142
Score = 43 (20.2 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 202 GLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSHG 253
G+ + S GQ Q N +KD L +G N + +++ NS G
Sbjct: 84 GVNNSSDGQKQLGNNNNNNSNKDIFLDRSYGGFNEISQQHKSNDIGGGNSSG 135
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 142 (55.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AER RR +ISE+++ LQ LVP K T + MLD +++++ LQ Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 425 VEFL 428
++ L
Sbjct: 194 LQTL 197
>UNIPROTKB|Q6Z339 [details] [associations]
symbol:B1121A12.20 "Os02g0726700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
EMBL:AP008208 EMBL:AP005284 RefSeq:NP_001047993.1 UniGene:Os.52592
GeneID:4330593 KEGG:osa:4330593 ProtClustDB:CLSN2919237
Uniprot:Q6Z339
Length = 344
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 52/191 (27%), Positives = 84/191 (43%)
Query: 242 ERKGESLVN--SHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKK 299
+++G S N + G A G +G DS+E GG G ++ G PS + S
Sbjct: 14 KQRGRSSGNGTAAGSAVDGASPAGSDSEEHVLPGGVGT---FSIRHASGTPSREEAGSHG 70
Query: 300 RKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPK 359
R F A G A + + + PS+ SA Q G + +
Sbjct: 71 GVRRSA-FAFAPALHGARMENAHETGGRSGSRAHRAPSTMWQDSAIDQRSIGQTPYEATR 129
Query: 360 EE--YIHVRARRGQAT--NSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
E A +G +T + HS E+ RR KI++R++ L++L+P + KA L E+I
Sbjct: 130 AEGRSSASSADQGPSTPRSKHSATEQRRRTKINDRLEILRELLPHTDQKRDKASFLSEVI 189
Query: 416 NYVQSLQRQVE 426
Y++ LQ +V+
Sbjct: 190 EYIRFLQEKVQ 200
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 145 (56.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 46/141 (32%), Positives = 73/141 (51%)
Query: 296 SSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTEN--QRKGDHKPSSTGNKSA-----GKQG 348
+S KRK Q DQ K +S+ +A + Q +G+ + N+ + +
Sbjct: 145 ASNKRKIQEQGRLDDQTKSRKSAKKAGSKRGKKAAQCEGEDGSIAVTNRQSLSCCTSEND 204
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
GSQ S + ++ AT+ SL R RRE+I+ER+K LQ+LVP +KV +
Sbjct: 205 SIGSQESPVAAKSNGKAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-IS 263
Query: 409 VMLDEIINYVQSLQRQVEFLS 429
ML+E ++YV+ LQ Q++ LS
Sbjct: 264 TMLEEAMHYVKFLQLQIKLLS 284
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 131 (51.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 357 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 416
PPK + + + + S+A R+RRE+ISER++ LQ LVPG +K+ A MLDE I+
Sbjct: 139 PPKRRNVRI------SKDPQSVAARLRRERISERIRILQRLVPGGTKMD-TASMLDEAIH 191
Query: 417 YVQSLQRQVEFLSMKLA 433
YV+ L+ QV+ L A
Sbjct: 192 YVKFLKSQVQSLERAAA 208
Score = 48 (22.0 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 272 SGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKD 324
+GGG QD+ +++ T G + G D Q SS EA ++
Sbjct: 67 AGGGYQDQYNSMPATYGAGAGVHQLDFAMSSPGSDSGAPQGSSSSSSSEAMRE 119
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 141 (54.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 36/84 (42%), Positives = 53/84 (63%)
Query: 353 QTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 412
+T PPK + + +T+ S+A R+RRE+ISER++ LQ LVPG +K+ A MLD
Sbjct: 145 ETVRPPKRRNVRI------STDPQSVAARMRRERISERIRILQRLVPGGTKMD-TASMLD 197
Query: 413 EIINYVQSLQRQVEFLSMKLATVN 436
E I+YV+ L+ QV+ L + A N
Sbjct: 198 EAIHYVKFLKTQVQSLE-RAAAAN 220
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 142 (55.0 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 49/169 (28%), Positives = 76/169 (44%)
Query: 261 ASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGE 320
A+G + GGG + ++ GG + GL+S +E ++ +
Sbjct: 100 AAGAMVENTSVVAGGGNNYCHRLQFHGGA-AGFGLASPGSSVVDNGLEIHESNVSKPPPP 158
Query: 321 AAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAE 380
AAK G+ + + G + + + S P + Q S A
Sbjct: 159 AAKKRA--CPSGEARAAGKKQCRKGSKPNKAASASSPSPSPSPSPSPNKEQP---QSAAA 213
Query: 381 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
+VRRE+ISER+K LQDLVP +KV ML++ INYV+ LQ QV+ L+
Sbjct: 214 KVRRERISERLKVLQDLVPNGTKVD-LVTMLEKAINYVKFLQLQVKVLA 261
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 145 (56.1 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 56/177 (31%), Positives = 79/177 (44%)
Query: 262 SGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFD-QAKGGQSSGE 320
S D D A S G + + + G G G ++ + GQ Q+ GG ++
Sbjct: 124 SQDDIDAAFKSPNGARGDHALYNGFGAA-GMHGAAAMQPPPFGQGGSMPAQSFGGGAAAS 182
Query: 321 AAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHS--- 377
SS G +A + +Q ++ I R T S
Sbjct: 183 GGGGGGSASAAAAAGASSGGGAAAPPRQRQRARRGQATDPHSIAERVYHSPTTFPFSPPF 242
Query: 378 -LAER---VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
+A +RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 243 FIASMPCCLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 298
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 50/172 (29%), Positives = 78/172 (45%)
Query: 261 ASGGDSDEAEF-SGGGGQDEPSAVE-GTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSS 318
++G D E + S GGG+ + A E G P + L + E +
Sbjct: 37 STGDDLFELVWESCGGGEIDSGAGEVQPAGVPCCRRLLPGSSPEPTSEDEMAAWLSTIVT 96
Query: 319 GEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPK-EEYIHVR--ARRGQA-TN 374
G + GDH+ + K G+ + P + EE V+ ARR
Sbjct: 97 GSGGGGGDDVAAGGDHQDPAV-KKPDGEPLTEKMDKKLPTRTEERRRVKHKARRNPGYAE 155
Query: 375 SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+H L E+ RR +I+E+ K LQ LVPGC K + + LD I+Y++SLQ+Q++
Sbjct: 156 THGLTEKRRRSRINEKFKMLQRLVPGCDKCSQSST-LDRTIHYMKSLQQQLQ 206
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 131 (51.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 36/100 (36%), Positives = 57/100 (57%)
Query: 383 RREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS------MKLATVN 436
RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ LQ QV+ +S M +
Sbjct: 13 RRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIDYLKQLQAQVQVMSRMGSMMMPMGMAM 71
Query: 437 PRLDFNIEELLAK--DVLQSRAGPSSTLGFSPDMPLVYPP 474
P+L ++ +A+ + S G++P M + PP
Sbjct: 72 PQLQMSVMAQMAQMAQIGLSMMNMGQAGGYAP-MHMHTPP 110
>DICTYBASE|DDB_G0271916 [details] [associations]
symbol:rtoA "unknown" species:44689 "Dictyostelium
discoideum" [GO:0006972 "hyperosmotic response" evidence=IEP]
[GO:0006906 "vesicle fusion" evidence=IMP] [GO:0006979 "response to
oxidative stress" evidence=IEP] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IMP] [GO:0048388 "endosomal lumen
acidification" evidence=IMP] [GO:0031210 "phosphatidylcholine
binding" evidence=IDA] [GO:0031154 "culmination involved in
sorocarp development" evidence=IMP] [GO:0005509 "calcium ion
binding" evidence=IDA] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0006944 "cellular membrane fusion" evidence=IDA]
[GO:0006887 "exocytosis" evidence=IMP] [GO:0006885 "regulation of
pH" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0030587 "sorocarp development" evidence=IMP] [GO:0007049 "cell
cycle" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IMP] dictyBase:DDB_G0271916 GO:GO:0005524
GO:GO:0005737 GO:GO:0006979 GO:GO:0045595 GenomeReviews:CM000151_GR
EMBL:AAFI02000007 GO:GO:0006972 GO:GO:0048388 GO:GO:0031210
GO:GO:0006874 GO:GO:0006887 eggNOG:NOG12793 GO:GO:0031154
GO:GO:0006906 EMBL:U48298 RefSeq:XP_645420.1
EnsemblProtists:DDB0185120 GeneID:8618200 KEGG:ddi:DDB_G0271916
OMA:CSKETHI ProtClustDB:CLSZ2431310 Uniprot:P54681
Length = 367
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 65/264 (24%), Positives = 106/264 (40%)
Query: 96 NALGIRKGSSASLRSCIDRPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIE 155
NA G SS SL S +D DI + ++S + ++ QS S ++++
Sbjct: 18 NAQGSIGSSSQSLSSEVDSS-DISSSGSNSTASSEGSVSSSSNSGSQSTSNSGSEASGSS 76
Query: 156 RAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNE 215
+ S+ + G+ + G+ T + G QG G+ S SG QS +
Sbjct: 77 NSGSQSTSNSGSEASGSSNSGSQSSTDSSNSGS---QGS----TGS---SNSGSQSSTDS 126
Query: 216 MNV-AEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGG 274
N ++ S D+S S G++ S +E G S NS E G SG +S S
Sbjct: 127 SNSGSQSSTDSSNSGSQGSTGSSNSGSESSGSS--NSGSEGSTGSSNSGSESSSG--SSN 182
Query: 275 GGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQS-SGEAAKDNTENQRKGD 333
G + S +G E S+ +S +G ++ G S SG + + N
Sbjct: 183 SGSESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSES 242
Query: 334 HKPSS-TGNKSAGKQGKQGSQTSD 356
SS +G++S+G +SD
Sbjct: 243 SSGSSNSGSESSGSSNSGSESSSD 266
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 133 (51.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 35/80 (43%), Positives = 52/80 (65%)
Query: 357 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 416
PPK + + + + + S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+
Sbjct: 117 PPKRKNVRI------SKDPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIH 169
Query: 417 YVQSLQRQVEFLSMKLATVN 436
YV+ L++QV+ L + A VN
Sbjct: 170 YVKFLKKQVQSLE-EHAVVN 188
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 131 (51.2 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 33/78 (42%), Positives = 50/78 (64%)
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
S TS K + +A RG A++ SL R RRE+I++R+K LQ LVP +KV + ML
Sbjct: 122 SNTSKSLKRK---AKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVD-ISTML 177
Query: 412 DEIINYVQSLQRQVEFLS 429
++ ++YV+ LQ Q++ LS
Sbjct: 178 EDAVHYVKFLQLQIKLLS 195
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 357 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 416
PPK + + + + S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I+
Sbjct: 120 PPKRRNVRI------SKDPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIH 172
Query: 417 YVQSLQRQVEFL 428
YV+ L++QV+ L
Sbjct: 173 YVKFLKKQVQSL 184
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 377 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
S+A R RRE+ISER++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L+
Sbjct: 131 SVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLN 182
>RGD|1306536 [details] [associations]
symbol:Rrbp1 "ribosome binding protein 1" species:10116 "Rattus
norvegicus" [GO:0005783 "endoplasmic reticulum" evidence=ISO]
RGD:1306536 GeneTree:ENSGT00530000063895 IPI:IPI00951128
PhosphoSite:F1M853 Ensembl:ENSRNOT00000055602 ArrayExpress:F1M853
Uniprot:F1M853
Length = 1324
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 53/195 (27%), Positives = 92/195 (47%)
Query: 186 RGRGMM-QGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNE-R 243
+G G+ Q + A N +K G Q+Q + A+ ++ A G +N+ +
Sbjct: 102 KGEGVQNQAKKGEGAQNQVKKGEGAQNQAKKGEGAQNQAKKGEGTQNQAKKGEGAQNQGK 161
Query: 244 KGESLVNS--HGEAKQGVGASG-GDSDEAEFSGGGGQDEPSAVEGTGGEPSAK-GLSSKK 299
KGE N GE Q G G ++A+ G G Q++ A +G GG+ AK G ++
Sbjct: 162 KGEGAQNQAKKGEGAQNQAKKGEGAQNQAK-KGEGAQNQ--AKKGEGGQNQAKKGEGAQN 218
Query: 300 RKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQG-SQTSDPP 358
+ + G+ + +QAK G+ AK E + K + N++ K+G+ G +QT
Sbjct: 219 QAKKGEGAQ-NQAKKGEGVQNQAKKGVEGAQNQGKKGEA--NQNQAKKGEGGQNQTK--- 272
Query: 359 KEEYIHVRARRGQAT 373
K E + + ++G+AT
Sbjct: 273 KGEGLQNQGKKGEAT 287
Score = 132 (51.5 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 52/194 (26%), Positives = 89/194 (45%)
Query: 178 PEPTGLYSRGRGMM-QGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNG 236
P + +G+G Q + A N K G Q+Q + A+ ++ A G
Sbjct: 74 PATSSQGKKGQGAQNQAKKGEGAQNQAKKGEGVQNQAKKGEGAQNQVKKGEGAQNQAKKG 133
Query: 237 STLKNE-RKGESLVNS--HGEAKQGVGASG-GDSDEAEFSGGGGQDEPSAVEGTGGEPSA 292
+N+ +KGE N GE Q G G G ++A+ G G Q++ A +G G + A
Sbjct: 134 EGAQNQAKKGEGTQNQAKKGEGAQNQGKKGEGAQNQAK-KGEGAQNQ--AKKGEGAQNQA 190
Query: 293 K-GLSSKKRKRNGQDIEFDQAKGGQSSGEAAK--DNTENQ-RKGD--HKPSSTGNKSAGK 346
K G ++ + + G+ + +QAK G+ + AK + +NQ +KG+ + G + A
Sbjct: 191 KKGEGAQNQAKKGEGGQ-NQAKKGEGAQNQAKKGEGAQNQAKKGEGVQNQAKKGVEGAQN 249
Query: 347 QGKQGSQTSDPPKE 360
QGK+G + K+
Sbjct: 250 QGKKGEANQNQAKK 263
>MGI|MGI:1932395 [details] [associations]
symbol:Rrbp1 "ribosome binding protein 1" species:10090 "Mus
musculus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030176
"integral to endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR007794 Pfam:PF05104 MGI:MGI:1932395 GO:GO:0007165
GO:GO:0015031 GO:GO:0030176 eggNOG:COG5651 CTD:6238
HOVERGEN:HBG061483 KO:K14000 ChiTaRS:RRBP1 EMBL:AF273683
EMBL:AF273684 EMBL:AF273685 EMBL:AF273686 EMBL:AF273687
EMBL:AF273688 EMBL:AF273689 EMBL:AF273690 EMBL:AF273691
EMBL:AF273692 EMBL:AF273693 EMBL:AL929550 EMBL:BC031452
EMBL:AK019964 IPI:IPI00121149 IPI:IPI00226199 IPI:IPI00226200
IPI:IPI00226201 IPI:IPI00230457 IPI:IPI00230458 IPI:IPI00230459
IPI:IPI00230462 IPI:IPI00230463 IPI:IPI00230464 IPI:IPI00230465
IPI:IPI00986807 RefSeq:NP_077243.2 RefSeq:NP_598329.1
UniGene:Mm.13705 ProteinModelPortal:Q99PL5 SMR:Q99PL5 STRING:Q99PL5
PhosphoSite:Q99PL5 PaxDb:Q99PL5 PRIDE:Q99PL5
Ensembl:ENSMUST00000037875 GeneID:81910 KEGG:mmu:81910
UCSC:uc008mqk.1 UCSC:uc008mql.1 UCSC:uc008mqm.1
GeneTree:ENSGT00530000063895 NextBio:350489 Bgee:Q99PL5
CleanEx:MM_RRBP1 Genevestigator:Q99PL5 Uniprot:Q99PL5
Length = 1605
Score = 138 (53.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 46/182 (25%), Positives = 79/182 (43%)
Query: 186 RGRGMM-QGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNE-R 243
+G G QG + A N K GGQ+Q + A+ ++ G +N+ +
Sbjct: 240 KGEGAQNQGKKGEGAQNQAKKGEGGQNQAKKGEGAQNQGKKGEGAQNQGKKGEGAQNQAK 299
Query: 244 KGESLVNS--HGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAK-GLSSKKR 300
KGE N GE Q G G + G G Q++ A +G GG+ AK G ++ +
Sbjct: 300 KGEGAQNQAKKGEGAQNQGKKGEGAQNQSKKGEGAQNQ--AKKGEGGQNQAKKGEGAQNQ 357
Query: 301 KRNGQDIEFDQAKGGQSSGEAAKDNTEN-QRKGDHKPSSTGNKSAGKQGKQGSQTSDPPK 359
+ G+ + +QAK G+ AK E Q +G ++ G+ G+ ++ + P+
Sbjct: 358 AKKGEGAQ-NQAKKGEGVQNQAKKGVEGAQNQGKKGEANQNQAKKGEGGQNQTKKGEGPQ 416
Query: 360 EE 361
+
Sbjct: 417 NQ 418
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 52/198 (26%), Positives = 90/198 (45%)
Query: 186 RGRGMM-QGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNE-R 243
+G G QG + A N K G Q+Q + A+ ++ A G +N+ +
Sbjct: 210 KGEGAQNQGKKGEGAQNQAKKGEGAQNQAKKGEGAQNQGKKGEGAQNQAKKGEGGQNQAK 269
Query: 244 KGESLVNS--HGEAKQGVGASG-GDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKR 300
KGE N GE Q G G G ++A+ G G Q++ EG + KG ++ +
Sbjct: 270 KGEGAQNQGKKGEGAQNQGKKGEGAQNQAK-KGEGAQNQAKKGEGAQNQ-GKKGEGAQNQ 327
Query: 301 KRNGQDIEFDQAKGGQSSGEAAK--DNTENQ-RKGDHKPSST----GNKSAGKQGKQGSQ 353
+ G+ + +QAK G+ AK + +NQ +KG+ + G ++ K+G +G+Q
Sbjct: 328 SKKGEGAQ-NQAKKGEGGQNQAKKGEGAQNQAKKGEGAQNQAKKGEGVQNQAKKGVEGAQ 386
Query: 354 TSDPPKEEYIHVRARRGQ 371
K E +A++G+
Sbjct: 387 NQGK-KGEANQNQAKKGE 403
Score = 124 (48.7 bits), Expect = 0.00079, P = 0.00079
Identities = 58/223 (26%), Positives = 96/223 (43%)
Query: 178 PEPTGLYSR-GRGMM-QGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASN 235
PE T + G G QG + A N K G Q+Q + + ++ A
Sbjct: 442 PEGTSNQGKKGEGAQNQGKKGEGAQNQSKKGEGAQNQAKKGEGGQNQAKKGEGAQNQAKK 501
Query: 236 GSTLKNE-RKGESLVNSHGEAKQGV-GASG-GDSDEAEFS----GGGGQDEPSAVEGTGG 288
G +N+ +KGE + N +AK+GV GA G EA + G GGQ++ EG
Sbjct: 502 GEGAQNQAKKGEGVQN---QAKKGVEGAQNQGKKGEANQNQAKKGEGGQNQTKKGEGPQN 558
Query: 289 EPSAKGLSSKK--RKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAG- 345
+ KG +++K +K G + + +G + G+ + +NQ K + G K G
Sbjct: 559 Q-GKKGEAAQKQDKKIEGAQNQGKKPEGTSNQGKKG-EGAQNQGKKGEGAQNQGKKGEGA 616
Query: 346 -KQGKQGSQTSDPPKE-EYIHVRARRGQ-ATNSHSLAERVRRE 385
QGK+G + K+ E + ++G+ A N E + +
Sbjct: 617 QNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQ 659
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 337 SSTGNKSAGKQGKQGSQTSDP-PKE-EYIHVRARRGQATN--SHSLAERVRREKISERMK 392
++T +SA G Q P P + +H +++ +A N + S A + RRE+ISER++
Sbjct: 157 TTTTPRSAAASGSQRRARPPPSPLQGSELHEYSKKQRANNKETQSSAAKSRRERISERLR 216
Query: 393 FLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
LQ+LVP KV MLD I+YV+ +Q Q+ L
Sbjct: 217 ALQELVPSGGKVD-MVTMLDRAISYVKFMQMQLRVL 251
>UNIPROTKB|I3L7I3 [details] [associations]
symbol:FLG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001751
InterPro:IPR002048 InterPro:IPR003303 InterPro:IPR011992
PRINTS:PR00487 PROSITE:PS00303 PROSITE:PS50222 Prosite:PS00018
GO:GO:0005198 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247
InterPro:IPR013787 Pfam:PF01023 GeneTree:ENSGT00530000063634
EMBL:CU633752 Ensembl:ENSSSCT00000022440 Uniprot:I3L7I3
Length = 2378
Score = 138 (53.6 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 79/303 (26%), Positives = 115/303 (37%)
Query: 74 HPTNSQSLGYCNIDAQHNASSSNALGI-RKGSSASLRSCIDRPLDIGWNPASSMIKGGIF 132
H S S Y QH +SS + G + GS + S ++ G +P+ G
Sbjct: 376 HQKGSGSNEYSKC-GQHRSSSGQSTGFGQHGSGSGQFSGFEQGSCSGQSPSFGKQGSGSG 434
Query: 133 LPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMM- 191
+ G S Q + R+ + S G+ + FG S G G
Sbjct: 435 QSSGSGQHGPSSHQSSSFEYHESRSGQSGSGQHGSGSGQSSGFGHHGSASGQSSGSGQHG 494
Query: 192 QGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERKGESLVNS 251
GP + + +S SG QS + S +S S +HG+ +G + + G S
Sbjct: 495 SGPHQSSSFEHHESRSG-QSGCGQHGSG--SGQSSGSGQHGSGSGQSGCGQH-GSGSGQS 550
Query: 252 HGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQ 311
G K G ASG S + G + S+ E G S + +GQ F Q
Sbjct: 551 TGSGKHG-SASGQSSGSGQH--GSSSHQSSSFEHHESRSGQSG-SGQHGSGSGQSSGFGQ 606
Query: 312 -AKG-GQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARR 369
A G GQSSG + Q G + S +S+G GK GS + EY H +R
Sbjct: 607 HASGSGQSSGWGQHGSGSGQYSGSGQHGSGSGQSSGS-GKHGSSSHQSSSFEY-H-ESRS 663
Query: 370 GQA 372
GQ+
Sbjct: 664 GQS 666
Score = 137 (53.3 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 47/197 (23%), Positives = 78/197 (39%)
Query: 185 SRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERK 244
S G G +G+G GQS + E S +HG+ +G + + +
Sbjct: 1093 SSGSGQHGSSSHKSSGSGKHGSGSGQSSGSGQQYHESRSGQSGYGQHGSGSGQSSGSGQH 1152
Query: 245 GESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTG-GEPSAKGLSSKKRKRN 303
G S G G G S S + G GQ S G+ G+ S GL + + +
Sbjct: 1153 GSGSGQSSGFGHHGSG-SHQSSGSGQHGSGSGQSSGSGQHGSASGQSSGSGLQAGSQ--H 1209
Query: 304 GQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSS-TGNKSAGKQGKQGSQTSDPPKEEY 362
G+ +GGQ +T + H S+ + +++AG++G S++SD +
Sbjct: 1210 GES--GSTVRGGQGPARGQSGDTSRHGQSSHGQSTHSESRTAGRRGSSQSESSDSERHSG 1267
Query: 363 I---HVRARRGQATNSH 376
H + GQA + H
Sbjct: 1268 ASQRHSASTHGQAGSQH 1284
>TAIR|locus:2098008 [details] [associations]
symbol:PIL2 "phytochrome interacting factor 3-like 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010017 "red or far-red light signaling
pathway" evidence=IEP] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 GO:GO:0010017
EMBL:AL138651 EMBL:AB090874 EMBL:BT033108 IPI:IPI00525935
IPI:IPI00846835 PIR:T48001 RefSeq:NP_001078329.1 RefSeq:NP_191768.2
UniGene:At.1005 UniGene:At.50304 ProteinModelPortal:Q8L5W7
SMR:Q8L5W7 IntAct:Q8L5W7 STRING:Q8L5W7 EnsemblPlants:AT3G62090.2
GeneID:825382 KEGG:ath:AT3G62090 TAIR:At3g62090 eggNOG:NOG305930
HOGENOM:HOG000115543 InParanoid:Q8L5W7 OMA:ETNMLES PhylomeDB:Q8L5W7
ProtClustDB:CLSN2680935 Genevestigator:Q8L5W7 Uniprot:Q8L5W7
Length = 363
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 45/143 (31%), Positives = 72/143 (50%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R R +A NS ER +R I+++M+ LQ+L+P K ++ MLDE INY+ +LQ QV
Sbjct: 186 RKRNAEAYNS---PERNQRNDINKKMRTLQNLLPNSHKDDNES-MLDEAINYMTNLQLQV 241
Query: 426 EFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHG 485
+ ++M V P + ++ S+ G + +G + P H AGL
Sbjct: 242 QMMTMGNRFVTPSM------MMPLGPNYSQMGLAMGVGMQMGEQQ-FLPAHVLGAGL--- 291
Query: 486 ALPGMGNPSDILRRTINSQLTPM 508
PG+ + +D+LR + L PM
Sbjct: 292 --PGINDSADMLRFLNHPGLMPM 312
>WB|WBGene00004264 [details] [associations]
symbol:qua-1 species:6239 "Caenorhabditis elegans"
[GO:0007154 "cell communication" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0060102 "collagen and cuticulin-based cuticle extracellular
matrix" evidence=IDA] InterPro:IPR001657 InterPro:IPR001767
InterPro:IPR006141 Pfam:PF01079 PRINTS:PR00632 PROSITE:PS50817
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0018996
GO:GO:0006508 GO:GO:0040011 GO:GO:0040018 GO:GO:0000003
GO:GO:0008233 GO:GO:0007154 GO:GO:0060102 InterPro:IPR003586
InterPro:IPR003587 SMART:SM00305 SMART:SM00306 GO:GO:0016539
EMBL:Z66500 EMBL:Z49968 PIR:T23754 RefSeq:NP_495725.2 HSSP:Q02936
ProteinModelPortal:G5EC21 SMR:G5EC21 MEROPS:C46.A05
EnsemblMetazoa:T05C12.10 GeneID:174319 KEGG:cel:CELE_T05C12.10
CTD:174319 WormBase:T05C12.10 GeneTree:ENSGT00690000102370
OMA:VIRHDIL NextBio:883508 Uniprot:G5EC21
Length = 1169
Score = 134 (52.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 46/153 (30%), Positives = 61/153 (39%)
Query: 200 GNGLKSLSGGQSQ-KNEMNVAEVSKDASLSVEHGA-SNGSTLKNERKGESLVNSHGEAKQ 257
GNG K L G K E N + + S E GA SNGS E G S G+
Sbjct: 622 GNGSKGLGTGSGDGKGEGNKSG-TPGKSDGKEDGAGSNGSGNGKEGDGNKSGGS-GKGGA 679
Query: 258 GVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQS 317
G G SG S + + +G GG + G G S + G + G
Sbjct: 680 GNGKSGDGSGDGKNNGNGGTGDGKDKNGKGSGSGDNDKSGTRAAGKGNAEGNGKGNGNDG 739
Query: 318 SGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQ 350
G + D + KGD S +GN++ GK GK+
Sbjct: 740 KGSGSGDGSGAGGKGDKSDSESGNEADGKDGKK 772
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 120 (47.3 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 359 KEEYIHVRARRGQATNS---HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
+EE R RR A S S+A R+RRE++S+RM+ LQ LVPG +++ A ML+E I
Sbjct: 105 EEEAAAPRPRRRNARVSSEPQSVAARLRRERVSQRMRALQRLVPGGARLD-TASMLEEAI 163
Query: 416 NYVQSLQRQVEFLSMKLATVN 436
YV+ L+ V+ L A ++
Sbjct: 164 RYVKFLKGHVQSLERAAAALH 184
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 122 (48.0 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 336 PSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ 395
PS + S G+ + S K+ + R + + ++ SL + RRE+I+ER++ LQ
Sbjct: 127 PSCSSGSSVGEDSIAATDGSVVLKQSD-NSRGHKQCSKDTQSLYAKRRRERINERLRILQ 185
Query: 396 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
LVP +KV + ML+E + YV+ LQ Q++ LS
Sbjct: 186 QLVPNGTKVD-ISTMLEEAVQYVKFLQLQIKLLS 218
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 126 (49.4 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 46/152 (30%), Positives = 68/152 (44%)
Query: 323 KDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERV 382
KD T + G+ K + +AGK KQ S + Y + G + +
Sbjct: 173 KDETSDD-SGERKKKKASS-AAGKS-KQASPRGCRSSQPY----RKSGDSIDELFTKFHR 225
Query: 383 RREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN 442
RR KI+ER + LQ LVPGC K + +A LD+ I Y++SLQ Q++ +M + P L +
Sbjct: 226 RRFKITERFRTLQRLVPGCDK-SNQASTLDQTIQYMKSLQHQLK--AMSVVGSPPALLYP 282
Query: 443 IEELLAKDVLQSRAGPSSTLGFSPDMPLVYPP 474
+ P T+ P M L PP
Sbjct: 283 AAVHPQSYMHPPPPPPPVTMPMHPGMVLAAPP 314
>WB|WBGene00013762 [details] [associations]
symbol:Y113G7B.12 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003964 "RNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006278 "RNA-dependent
DNA replication" evidence=IEA] InterPro:IPR000477 Pfam:PF00078
Pfam:PF03372 GO:GO:0003723 GO:GO:0003964 GO:GO:0006278
InterPro:IPR005135 SUPFAM:SSF56219 EMBL:AL110477
GeneTree:ENSGT00690000102370 RefSeq:NP_507901.2
ProteinModelPortal:Q9NAL5 EnsemblMetazoa:Y113G7B.12 GeneID:190975
KEGG:cel:CELE_Y113G7B.12 UCSC:Y113G7B.12 CTD:190975
WormBase:Y113G7B.12 eggNOG:NOG314477 InParanoid:Q9NAL5 OMA:DNGEERG
NextBio:947550 Uniprot:Q9NAL5
Length = 988
Score = 131 (51.2 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 56/221 (25%), Positives = 93/221 (42%)
Query: 201 NGLKSLSGGQSQKNEMNV-AEVSKDASLSVEHGAS-NGSTLKN-ERKGESLVNSHG-EAK 256
NG +S +G +S E + E S + S AS NG N E +G + +G E+
Sbjct: 114 NGEESDNGEESDNEEASDNGEASDNGEESDNEEASDNGEESDNGEERGNGEASDNGDESD 173
Query: 257 QGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAK--G 314
G + G+ + E + G++ + E GE G +S NG + + +A G
Sbjct: 174 NGEASDNGEESDNEEASDNGEESDNGEESDNGEERGNGEASD----NGDESDNGEASDNG 229
Query: 315 GQSSGEAAKDNTENQRKGDHKPSS--TGNKSAGKQGKQGS--QTSDPPKEEYIHVRARRG 370
+S E A DN E G+ + + N+ A G++ + SD +E G
Sbjct: 230 EESDNEEASDNGEESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESDNGEERDNG 289
Query: 371 QATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
+A+++ +E E+I + L V C K+ KA L
Sbjct: 290 EASDNGEESEN--GEEIGLKFSVLLANVRSCKKLE-KASQL 327
>TAIR|locus:2098383 [details] [associations]
symbol:AT3G28780 "AT3G28780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0010584
"pollen exine formation" evidence=RCA;IMP] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] EMBL:CP002686 GO:GO:0010584 IPI:IPI00543728
RefSeq:NP_189520.2 UniGene:At.42733 PRIDE:F4J0E6
EnsemblPlants:AT3G28780.1 GeneID:822510 KEGG:ath:AT3G28780
OMA:MEQTRIS InterPro:IPR009605 Pfam:PF06746 Uniprot:F4J0E6
Length = 674
Score = 129 (50.5 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 77/307 (25%), Positives = 113/307 (36%)
Query: 54 GSSSCS-SAPMVDSFNQTIWDHPTNSQSLGYCNIDAQH--NASSSNALGIRKGSSASLRS 110
GSS+ S S P D T P+ S + G ++ ++SS+ A G GS+A+ S
Sbjct: 231 GSSAGSPSYPSDDGSGSTAGG-PSGSTTDGSAGGESSMGGDSSSAGAAG-ESGSAATADS 288
Query: 111 CIDRPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQ---FPADSAFIERAARFSSFSGGN 167
D G A+ GG ++ G + AD++ S SGG
Sbjct: 289 GDAAGADSGG--AAGADSGGAASADSGGAAAGETASGGAAAADTSGGSAETGGESASGGA 346
Query: 168 FCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASL 227
G TG S G G E G + +G S + E +
Sbjct: 347 ASGAGAASGASAKTGGES-GEAASGGSAET---GGESASAGAASGGSAETGGESGSGGAA 402
Query: 228 SVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTG 287
S AS G+T + + GE+ G ASGG+S + G + S E TG
Sbjct: 403 SGGESASGGATSGGSPETGGSAETGGESASGGAASGGESASGGAASSGSVE--SGGESTG 460
Query: 288 GEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQ 347
+S + G + A GG +SG +A+ E+ G STG++SA
Sbjct: 461 ATSGGSAETSDESASGGAASGGESASGGAASGGSAETGGESTSSGVASGGSTGSESASAG 520
Query: 348 GKQGSQT 354
G T
Sbjct: 521 AASGGST 527
Score = 121 (47.7 bits), Expect = 0.00059, P = 0.00059
Identities = 76/312 (24%), Positives = 116/312 (37%)
Query: 48 GNPLGVGSSSCSSAPMVDSFNQTI-WDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSA 106
G G+GSS S +P DS + + PT+ S G D+ +A S + GS +
Sbjct: 189 GGSSGLGSSGDSGSPGSDSGSPSADTGSPTDGGSYGDTTGDSGSSAGSPSYPS-DDGSGS 247
Query: 107 SLRSCIDRPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGG 166
+ D SSM G A G + + D+A + + SGG
Sbjct: 248 TAGGPSGSTTDGSAGGESSM-GGDSSSAGAAGESGSAATADSGDAAGADSGGAAGADSGG 306
Query: 167 NFCDMMNTFGTPEPTGLYSRGRGMMQGPQEV---FAGNGLKSLSGGQSQKNEMNVAEVSK 223
E + G E A G S +G S + E +
Sbjct: 307 AASADSGGAAAGETASGGAAAADTSGGSAETGGESASGGAASGAGAASGASAKTGGESGE 366
Query: 224 DASL-SVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSA 282
AS S E G + S G S + GE+ G ASGG+S + GG + +
Sbjct: 367 AASGGSAETGGESASA--GAASGGS-AETGGESGSGGAASGGESASGGATSGGSPETGGS 423
Query: 283 VEGTGGEPSAKGLSSKKRKRNGQDIEFDQAK-GGQSSGEAAKDNTENQRKGDHKPSSTGN 341
E TGGE ++ G +S +G + GG+S+G + + E + +++G
Sbjct: 424 AE-TGGESASGGAASGGESASGGAASSGSVESGGESTGATSGGSAETSDESASGGAASGG 482
Query: 342 KSA-GKQGKQGS 352
+SA G GS
Sbjct: 483 ESASGGAASGGS 494
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 125 (49.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 33/90 (36%), Positives = 54/90 (60%)
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
G + + PK + + + +T+ ++A R RRE+ISE+++ LQ LVPG +K+ A M
Sbjct: 261 GLEIVEKPKRKNVKI------STDPQTVAARQRRERISEKIRVLQTLVPGGTKMD-TASM 313
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLD 440
LDE NY++ L+ QV+ L + P+LD
Sbjct: 314 LDEAANYLKFLRAQVKALE----NLRPKLD 339
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 115 (45.5 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 28/86 (32%), Positives = 54/86 (62%)
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
+D P+ + + + +++ ++A R+RRE++S+R++ LQ LVPG +K+ A MLDE
Sbjct: 271 ADKPRRKNVRI------SSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMD-TASMLDEA 323
Query: 415 INYVQSLQRQVEFL-SMKLATVNPRL 439
+Y++ L+ QV+ L ++ T +L
Sbjct: 324 ASYLKFLKSQVQKLETLGTTTTTSKL 349
Score = 53 (23.7 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 21/81 (25%), Positives = 31/81 (38%)
Query: 224 DASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAE---FSGGGGQDEP 280
DA+L+ G+ G V++ G +GG+ E +SGGGG +
Sbjct: 100 DAALAFSRNQLGGAACDGSDGGA--VSNGAMLSSYSGTTGGNISSGESNNYSGGGGGYDA 157
Query: 281 SAVEGTGGEPSAKGLSSKKRK 301
V T +A KRK
Sbjct: 158 EVVSPTSTMSAATQSLHPKRK 178
>TAIR|locus:2179122 [details] [associations]
symbol:APTX "APRATAXIN-like" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006790 "sulfur compound metabolic
process" evidence=IDA] [GO:0009150 "purine ribonucleotide metabolic
process" evidence=IDA] [GO:0047627 "adenylylsulfatase activity"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR011146
InterPro:IPR011598 InterPro:IPR015880 Pfam:PF00010 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50888 PROSITE:PS51084 SMART:SM00353
SMART:SM00355 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 eggNOG:NOG278510
KO:K10863 PANTHER:PTHR12486 GO:GO:0006790 EMBL:AL161746
IPI:IPI00539681 PIR:T48153 RefSeq:NP_195751.1 UniGene:At.54671
ProteinModelPortal:Q9M041 SMR:Q9M041 PRIDE:Q9M041
EnsemblPlants:AT5G01310.1 GeneID:830940 KEGG:ath:AT5G01310
GeneFarm:3073 TAIR:At5g01310 HOGENOM:HOG000083464 InParanoid:Q9M041
OMA:GHEGNLQ PhylomeDB:Q9M041 ProtClustDB:CLSN2687115
BioCyc:ARA:AT5G01310-MONOMER Genevestigator:Q9M041 GO:GO:0047627
GO:GO:0009150 InterPro:IPR002589 Pfam:PF01661 PROSITE:PS51154
Uniprot:Q9M041
Length = 912
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 36/109 (33%), Positives = 59/109 (54%)
Query: 328 NQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKI 387
N R + SST + S+ + S+T + + R+ +T+ S+A R RR +I
Sbjct: 5 NLRSENPNSSSTTSSSSSSFHRHKSETGNTKRS-----RSTSTLSTDPQSVAARDRRHRI 59
Query: 388 SERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 436
S+R K LQ +VPG +K+ + MLDE I+YV+ L+ Q+ + L +N
Sbjct: 60 SDRFKILQSMVPGGAKMDTVS-MLDEAISYVKFLKAQIWYHQNMLLFIN 107
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 123 (48.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 36/106 (33%), Positives = 55/106 (51%)
Query: 324 DNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVR 383
++T + G+ +P + N K+ G+ PK + SLA + R
Sbjct: 168 ESTSPKLAGNKRPFTGENTQLSKKPSSGTNGKIKPKATT--------SPKDPQSLAAKNR 219
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
RE+ISER+K LQ+LVP +KV ML++ I YV+ LQ QV+ L+
Sbjct: 220 RERISERLKVLQELVPNGTKVD-LVTMLEKAIGYVKFLQVQVKVLA 264
Score = 38 (18.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 87 DAQHNASSSNALGIRKGSSASLRSCIDRPLDIGWNPASSMIKGGIFLPNAPGMFPQ-SLS 145
++ + SS G+ +G+SAS S I N +G +F P+ + SL
Sbjct: 18 NSSEDLSSPQNCGLDEGASASSSSTI--------NSDHQNNQGFVFYPSGETIEDHNSLM 69
Query: 146 QFPADSAF 153
F A S F
Sbjct: 70 DFNASSFF 77
>DICTYBASE|DDB_G0287399 [details] [associations]
symbol:DDB_G0287399 species:44689 "Dictyostelium
discoideum" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0287399
GO:GO:0005576 EMBL:AAFI02000100 eggNOG:NOG12793 RefSeq:XP_637288.1
EnsemblProtists:DDB0187468 GeneID:8626120 KEGG:ddi:DDB_G0287399
OMA:ETINIFH Uniprot:Q54KD5
Length = 486
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 47/199 (23%), Positives = 70/199 (35%)
Query: 187 GRGMMQGPQEVFAGNGLKS--LSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERK 244
G G G +G G S +S S N + S +AS G+S+GS+
Sbjct: 44 GSGSGGGSSSSGSGTGQSSGTVSSSGSASNNTSSGSQSGNASSGSSSGSSSGSS-SGSSS 102
Query: 245 GESLVNSHGEAKQGV---GASGGDSDEAEF--SGGGGQDEPSAVEGTGGEPSAKGLSSKK 299
G S + G A G G+SG S A S G S+ G + G +S
Sbjct: 103 GSSSGSQSGNASSGSSSSGSSGSQSGNASSGTSSGSSSSSGSSQSGNASSGPSSGTTSSS 162
Query: 300 RKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAG-KQGKQGSQTSDPP 358
+ + A G SSG + + + S +G+ S+G G S S
Sbjct: 163 GSSQSESSQSGNASSGPSSGTTSSSGSSQSESSQSESSQSGSASSGPSSGTTSSSGSSQS 222
Query: 359 KEEYIHVRARRGQATNSHS 377
+G + +S S
Sbjct: 223 DSSSFTTTGSQGSSGSSGS 241
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 57/244 (23%), Positives = 90/244 (36%)
Query: 116 LDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSG-GNFCDMMNT 174
L +G A +++ I + N G+ P + + S SS SG G +++
Sbjct: 8 LFVGLILAFAVLSNAISIKNDGGVNPFDNNNSGSGSGSGSGGGSSSSGSGTGQSSGTVSS 67
Query: 175 FGTPEP-TGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGA 233
G+ T S+ G + S G S ++ A S +S S G+
Sbjct: 68 SGSASNNTSSGSQSGNASSGSSSGSSSGSSSGSSSGSSSGSQSGNA--SSGSSSSGSSGS 125
Query: 234 SNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAK 293
+G+ G S +S G ++ G AS G S S G Q E S PS+
Sbjct: 126 QSGNASSGTSSGSS--SSSGSSQSG-NASSGPSSGTTSSSGSSQSESSQSGNASSGPSS- 181
Query: 294 GLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSS-TGNKSAGKQGKQGS 352
G +S + + + ++ G +S + T + SS T S G G GS
Sbjct: 182 GTTSSSGSSQSESSQSESSQSGSASSGPSSGTTSSSGSSQSDSSSFTTTGSQGSSGSSGS 241
Query: 353 QTSD 356
SD
Sbjct: 242 SQSD 245
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 345 GKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
G +S PP R +++ ++A R+RRE++SER++ LQ LVPG SK+
Sbjct: 277 GGPASASDPSSRPPPPPQRPRRKNVRISSDPQTVAARLRRERVSERLRVLQRLVPGGSKM 336
Query: 405 TGKAVMLDEIINYVQSLQRQVEFL 428
A MLDE +Y++ L+ Q+E L
Sbjct: 337 D-TATMLDEAASYLKFLKSQLEAL 359
>FB|FBgn0038492 [details] [associations]
symbol:Mur89F "Mucin related 89F" species:7227 "Drosophila
melanogaster" [GO:0008061 "chitin binding" evidence=IEA]
[GO:0006030 "chitin metabolic process" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0031012 "extracellular
matrix" evidence=ISM] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISM] InterPro:IPR002557 Pfam:PF01607
PROSITE:PS50940 SMART:SM00494 EMBL:AE014297 GO:GO:0005576
eggNOG:NOG12793 GO:GO:0031012 GO:GO:0008061 GO:GO:0005201
CAZy:CBM14 Gene3D:2.170.140.10 SUPFAM:SSF57625 GO:GO:0006030
GeneTree:ENSGT00700000104174 RefSeq:NP_650611.1 UniGene:Dm.16781
ProteinModelPortal:Q9VEL9 SMR:Q9VEL9 PRIDE:Q9VEL9
EnsemblMetazoa:FBtr0083413 GeneID:42080 KEGG:dme:Dmel_CG4090
UCSC:CG4090-RA CTD:42080 FlyBase:FBgn0038492 InParanoid:Q9VEL9
OMA:QWNNNNQ OrthoDB:EOG46Q59B PhylomeDB:Q9VEL9 GenomeRNAi:42080
NextBio:827084 ArrayExpress:Q9VEL9 Bgee:Q9VEL9 Uniprot:Q9VEL9
Length = 2112
Score = 134 (52.2 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 56/239 (23%), Positives = 89/239 (37%)
Query: 171 MMNTFGTPEPTGLYS-RGRGMMQGPQEVFAGNGLKSLSGGQS-QKNEMNVAEVSKDASLS 228
M N G+ G S +G QG + G S G S Q + N S S S
Sbjct: 759 MANGSGSSSSQGSSSNQGSSSSQGSS---SNQGSSSNQGSSSNQGSSSNQGSSSNQGSSS 815
Query: 229 VEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGG 288
+ +SN + N+ G S N + QG ++ G S S G G
Sbjct: 816 NQGSSSNQGSSSNQ--GSSS-NQGSSSSQGSSSNQGSSSNQGSSSNQGSSSNQGSSSNQG 872
Query: 289 EPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQG 348
S++G SS + + Q Q + + ++ NQ ++ SS+ S+ QG
Sbjct: 873 SSSSQGSSSNEGSSSNQGSSSSQGSSSNQGSSSNQGSSSNQGSSSNQGSSSNQGSSSNQG 932
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATN--SHSLAERVRR--EKISERMKFLQDLVPGCSK 403
+Q+S + + + ++N S S ++ + EK FL D CSK
Sbjct: 933 SSSNQSSSSNQSSSNQSSSNQSSSSNQTSSSTTQKPFKPAEKCESEETFLADN-ENCSK 990
Score = 48 (22.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 22/101 (21%), Positives = 40/101 (39%)
Query: 12 EKRNDNPMDYHSPNMSSDWQFSGXXXXXXXXXXVPTGNPLGVGSSSCSSAPMVDSFNQ-- 69
E + + + S SS Q S +G+ GSS S++ S NQ
Sbjct: 300 ESNSGSSSNQESSTSSSSNQGSSSQNAGSSNQNQSSGSNQSSGSSQSSNSNQNSSNNQNQ 359
Query: 70 TIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRS 110
+ + +N S N + ++ S+ + G + SS++ S
Sbjct: 360 SSQNSGSNQSSSSSQNSGSNQSSGSNQSSGNNQSSSSNQSS 400
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 24/58 (41%), Positives = 41/58 (70%)
Query: 371 QATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
+ T +H+L+E+ RREK++ER L+ ++P SK+ K +LD+ I Y+Q LQ++V+ L
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKID-KVSILDDTIEYLQDLQKRVQEL 457
>UNIPROTKB|J9NYY3 [details] [associations]
symbol:FLG2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001751 InterPro:IPR002048 InterPro:IPR011992
PROSITE:PS00303 PROSITE:PS50222 Prosite:PS00018 GO:GO:0005509
Gene3D:1.10.238.10 InterPro:IPR018247 GeneTree:ENSGT00530000063634
EMBL:AAEX03011063 EMBL:AAEX03011064 EMBL:AAEX03011065
Ensembl:ENSCAFT00000049887 OMA:RGHAGDS Uniprot:J9NYY3
Length = 2801
Score = 132 (51.5 bits), Expect = 0.00020, P = 0.00020
Identities = 79/298 (26%), Positives = 118/298 (39%)
Query: 77 NSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSCIDRPLDIGWNPASSMIKGGIFLPNA 136
+SQS G+ QH +SS + G +GS S + + G+ +SS + G A
Sbjct: 2185 SSQSSGF----GQHESSSGESSGTEQGSGLGQSSSSGQN-ESGYGQSSSYGQHGY----A 2235
Query: 137 PGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQE 196
G S Q + S R S SG + + FG+ + +G G G Q
Sbjct: 2236 SGQ-TSSCGQQGSGSGQSSRYGYHESVSGQSSGFGQHKFGSGQSSGFGQHGSGSSQSSS- 2293
Query: 197 VFAGNGLKS-LSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEA 255
+ +G +S S G Q +E + + S G S+ S R G+S +S G+
Sbjct: 2294 -YGQHGSRSGQSSGFGQ-HESSSGQSSSYGQHGSAFGQSSNSAQHASRSGQS--SSFGQH 2349
Query: 256 KQGVGASGGDSDEAEFSG---GGGQDEPSAVEGT--GGEPSAKGLSS---KKRKRNGQDI 307
G G S G SG G GQ + + G S G SS + R +GQ
Sbjct: 2350 GTGSGQSSGFGQHRFGSGQSSGFGQHGSGTSQSSSYGQHGSGSGQSSGFGQHRFGSGQSS 2409
Query: 308 EFDQAKGG--QSS--GEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEE 361
F Q G QSS G+ + ++ G H+ S + G+ G SQ+S + E
Sbjct: 2410 GFGQHGSGTSQSSSYGQHGSGSGQSSGFGQHRFGSGQSSGFGQHGSGTSQSSSYGQHE 2467
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 330 RKGDHKPSSTGNKSAGKQGKQGSQTSDPP----KEEYIHVRARRGQATNSHSLAERVRRE 385
+K S T +A QG D P KE+ + T +H++ E+ RRE
Sbjct: 392 KKSSSSSSGTATVTAPSQGMLKKIIFDVPRVHQKEKLMLDSPEARDETGNHAVLEKKRRE 451
Query: 386 KISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
K++ER L+ ++P +K+ K +LD+ I Y+Q L+R+V+ L
Sbjct: 452 KLNERFMTLRKIIPSINKID-KVSILDDTIEYLQELERRVQEL 493
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
V ARR AT + SL R RRE+I+ R++ LQ LVP +KV + ML+E ++YV+ LQ Q
Sbjct: 210 VPARRRSATIAQSLYARRRRERINGRLRILQKLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 268
Query: 425 VE 426
++
Sbjct: 269 IK 270
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 316 QSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNS 375
Q G AA + + R G KP+ Q + G T+ E + +A A+ S
Sbjct: 58 QRGGAAAAEGSS--RGGGGKPAVVSGLLGSLQAELGRVTA----REIMDAKALA--ASRS 109
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 433
HS AER RR++I+ + L+ L+P +K T KA +L E+I +V+ L+RQ ++ A
Sbjct: 110 HSEAERRRRQRINGHLARLRSLLPNTTK-TDKASLLAEVIEHVKELKRQTTAIAAAAA 166
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 36/102 (35%), Positives = 57/102 (55%)
Query: 336 PSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNS--------HSLAERVRREKI 387
P+ S + + SQ P K++ R + G+A ++ SLA + RRE+I
Sbjct: 161 PAPAPRGSQKRAHAESSQAMSPSKKQCGAGR-KAGKAKSAPTTPTKDPQSLAAKNRRERI 219
Query: 388 SERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
SER++ LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 220 SERLRILQELVPNGTKVD-LVTMLEKAISYVKFLQLQVKVLA 260
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 60/251 (23%), Positives = 100/251 (39%)
Query: 187 GRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERK-G 245
G G M VF+G G + S M A + V G G + +R+ G
Sbjct: 187 GGGAMDAT--VFSGIGNDDVVDAVSATVAMTTATATTSQCERVRGGGGGGGCGRKQRRPG 244
Query: 246 ESLVNSHGEAKQGVG-ASGGDSDEAEF--SGGGGQDEPSAVEGTGGEPSAKGLSSKKRKR 302
+ A S D+ S G D + + P++K +
Sbjct: 245 RKRKAAEPTAAAAAADMSSQDNPLCSLLASNTAGADGGIQIAFSTSAPASKR-AKPSLSS 303
Query: 303 NGQDIEFD-QAKGGQSSGEAAKD---NTENQRKGDHKPSSTGNKSAGKQGKQGSQTS-DP 357
+ I FD + GG G D + + K +A + G++ + +
Sbjct: 304 SSSSISFDGRGPGGNCGGGGGDDPLYEPDTEALAQVK-EMIYRAAAMRPVTLGAEDAGER 362
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P+ + + +++ ++A R RRE+ISER++ LQ LVPG +K+ A MLDE NY
Sbjct: 363 PRRRNVRI------SSDPQTVAARQRRERISERLRVLQKLVPGGAKMD-TASMLDEAANY 415
Query: 418 VQSLQRQVEFL 428
++ L+ Q+ L
Sbjct: 416 LRFLKSQIREL 426
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 43/164 (26%), Positives = 73/164 (44%)
Query: 285 GTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKD----NTENQRKGDHKPSSTG 340
GTG E A+ + + + N + SSG + + + + S
Sbjct: 42 GTGFELLAERPTKQMKTNNNMNSTSSSPSSSSSSGSRTSQVISFGSPDTKTNPVETSLNF 101
Query: 341 NKSAGKQGKQGSQTSDPPKEEYIHVRARRG-QATNSHSLAERVRREKISERMKFLQDLVP 399
+ K GS+ D ++ RR H LAER RR+K++ER+ L L+P
Sbjct: 102 SNQVSMDQKVGSKRKD-----CVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLP 156
Query: 400 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI 443
G K T KA +L++ I +++ LQ +V+ L + V ++D +I
Sbjct: 157 GLKK-TDKATVLEDAIKHLKQLQERVKKLEEE-RVVTKKMDQSI 198
>TAIR|locus:2090679 [details] [associations]
symbol:AT3G19500 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB025624 EMBL:AY084520 EMBL:AF488631 IPI:IPI00518921
RefSeq:NP_566639.1 UniGene:At.38400 ProteinModelPortal:Q9LT67
SMR:Q9LT67 EnsemblPlants:AT3G19500.1 GeneID:821484
KEGG:ath:AT3G19500 TAIR:At3g19500 eggNOG:NOG294378
HOGENOM:HOG000240890 OMA:HVENSNG PhylomeDB:Q9LT67
ProtClustDB:CLSN2688564 Genevestigator:Q9LT67 Uniprot:Q9LT67
Length = 270
Score = 116 (45.9 bits), Expect = 0.00045, P = 0.00045
Identities = 57/225 (25%), Positives = 95/225 (42%)
Query: 217 NVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGG 276
+ AE D ++ G ++ S L G +S + + VG G DS FSG G
Sbjct: 3 DTAEDQDDRAMMEAEGVTSFSELLMFSDGVLSSSSDHQPEGNVGDGGEDSLGFVFSGKTG 62
Query: 277 QDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAK-GGQSSGEAAKDNTENQRKGDHK 335
G + + L D++ K ++S +A + ++ + K
Sbjct: 63 SRMLCFSGGYQNDDESLFLEPSVPTSGVSDLDPSCIKIDCRNSNDACTVD-KSTKSSTKK 121
Query: 336 PSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ 395
+ TGN G++ Q P K + +R Q +S +A +VR+E++ ER+ LQ
Sbjct: 122 RTGTGN------GQESDQNRKPGK------KGKRNQEKSSVGIA-KVRKERLGERIAALQ 168
Query: 396 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 440
LV K T A +L E + Y++ LQ Q++ L +N LD
Sbjct: 169 QLVSPYGK-TDAASVLHEAMGYIKFLQDQIQVLCSPYL-INHSLD 211
>UNIPROTKB|F1PS44 [details] [associations]
symbol:F1PS44 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0001669 "acrosomal vesicle" evidence=IEA]
InterPro:IPR026787 GO:GO:0001669 OMA:MNDQGKC PANTHER:PTHR17571:SF1
GeneTree:ENSGT00530000064145 EMBL:AAEX03003386
Ensembl:ENSCAFT00000016950 Uniprot:F1PS44
Length = 324
Score = 117 (46.2 bits), Expect = 0.00052, P = 0.00052
Identities = 53/217 (24%), Positives = 93/217 (42%)
Query: 176 GTP-EPTGLYSRGRGMMQGPQEVFA-GNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGA 233
G P EP G + Q E F+ GN + ++ E ++E + SVEH +
Sbjct: 20 GQPDEPPGSMDHQASVQQLSGEYFSLGNPSDGEALYETAAGENTLSEHTSGEHTSVEHFS 79
Query: 234 SNGSTLKNERKGESLVNSHGEAKQGVGA-SGGDSDEAEFSGGGGQDEPSAVEGTGGEPSA 292
+ S+ ++ GE H ++ G + + +E + G ++PS G +PS
Sbjct: 80 AEHSSTEHT-SGEHTSGEHTSGERATGEHTSSEHATSEHTSG---EQPS-----GEQPS- 129
Query: 293 KGLSSKKRKRNGQDIEFDQAKGGQSSGEA-AKDNTENQRKGDHKPSSTGNKSAGKQGKQG 351
G S + +G+ +Q G QSSGE + + T ++ KPS + G+Q
Sbjct: 130 -GEKSSGEQPSGEKSSGEQPSGEQSSGEKPSAEQTSGEQAVAEKPSGEQAVAEKPSGEQ- 187
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKIS 388
+ P E+ + +A QA+ + AE+ E+ S
Sbjct: 188 AVAERPSGEQASNEKAYSEQASAEQASAEQASSEQAS 224
>POMBASE|SPAC3F10.12c [details] [associations]
symbol:SPAC3F10.12c "transcription factor (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
PomBase:SPAC3F10.12c GO:GO:0005634 EMBL:CU329670 GO:GO:0006357
GO:GO:0000978 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG331316
KO:K09104 OrthoDB:EOG4SN4ZF PIR:T38713 RefSeq:NP_593944.1
ProteinModelPortal:Q10186 EnsemblFungi:SPAC3F10.12c.1
GeneID:2543157 KEGG:spo:SPAC3F10.12c NextBio:20804183
Uniprot:Q10186
Length = 201
Score = 112 (44.5 bits), Expect = 0.00053, P = 0.00053
Identities = 41/131 (31%), Positives = 58/131 (44%)
Query: 321 AAKDNTENQRKGDHKPSSTGNKSAGKQ--GKQGSQTSDPP---KEEYIHVRARRGQATNS 375
A N K D +T +K++ G+ T + P EE+ +A+R S
Sbjct: 39 AVSYNPYPSEKIDFPKKNTAHKNSTTSTVASSGNTTMEKPCVGSEEWY--KAKR----LS 92
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 435
H ER RRE ISE +K L ++VPGC K K +L Y++SL+ E K
Sbjct: 93 HKEVERRRREAISEGIKELANIVPGCEK--NKGSILQRTAQYIRSLKEMEEMCREKSNLE 150
Query: 436 NPRLDFNIEEL 446
D I+EL
Sbjct: 151 KLVADHTIQEL 161
>TAIR|locus:2204898 [details] [associations]
symbol:HFR1 "AT1G02340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009642 "response to light
intensity" evidence=IEP] [GO:0009785 "blue light signaling pathway"
evidence=TAS] [GO:0003712 "transcription cofactor activity"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003712
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC064879
GO:GO:0009642 GO:GO:0009785 EMBL:AF288287 EMBL:AF324245
EMBL:AF323182 EMBL:AK117248 IPI:IPI00545685 PIR:G86153
RefSeq:NP_563650.1 UniGene:At.24795 ProteinModelPortal:Q9FE22
SMR:Q9FE22 IntAct:Q9FE22 STRING:Q9FE22 PRIDE:Q9FE22
EnsemblPlants:AT1G02340.1 GeneID:839300 KEGG:ath:AT1G02340
TAIR:At1g02340 eggNOG:NOG274868 HOGENOM:HOG000112891 OMA:FSSHAMR
PhylomeDB:Q9FE22 ProtClustDB:CLSN2916946 Genevestigator:Q9FE22
GermOnline:AT1G02340 Uniprot:Q9FE22
Length = 292
Score = 116 (45.9 bits), Expect = 0.00054, P = 0.00054
Identities = 37/115 (32%), Positives = 56/115 (48%)
Query: 323 KDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERV 382
KD +E + DH+ K+ + +SD EE+ R + R
Sbjct: 93 KDFSE---RSDHRFYLRNKHENPKKRRIQVLSSDDESEEF----TREVPSVTRKGSKRRR 145
Query: 383 RREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 437
R EK+S +M+ LQ LVP C K T K +LD+ I Y+++LQ Q++ +S VNP
Sbjct: 146 RDEKMSNKMRKLQQLVPNCHK-TDKVSVLDKTIEYMKNLQLQLQMMST--VGVNP 197
>UNIPROTKB|H9L0I9 [details] [associations]
symbol:H9L0I9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] GeneTree:ENSGT00530000064712 EMBL:AADN02051420
Ensembl:ENSGALT00000023308 OMA:NDHHDST Uniprot:H9L0I9
Length = 276
Score = 115 (45.5 bits), Expect = 0.00062, P = 0.00062
Identities = 43/196 (21%), Positives = 74/196 (37%)
Query: 189 GMMQGPQEV--FAGNGLKSLSGGQSQKNEMNVAEV-SKDASLSVEHGASNGSTLKNERKG 245
G G +E G +GGQS N + + D+ + + G +G N
Sbjct: 61 GQQSGKEEEKNTEGQDTNQNNGGQSGSNTASQPSTQNSDSQSNTQGGDDHGQNTHNSNHQ 120
Query: 246 ESLVNSHGEAKQGVGAS-GGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNG 304
+S NS + G G++D G D + + G A ++++ N
Sbjct: 121 DSKTNSQDSQQPGSQTEQNGNTDGKNGQEDGNTDGQNGQKDNSG--GANSQTNQQSNSNP 178
Query: 305 QDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIH 364
QD ++ Q S + +NT+ Q +S N + + +QGS D K +
Sbjct: 179 QDNNTNKQTNQQDSSKPEGENTDKQTTQQGSSNSQDNNTNKQTNQQGSGGQDGEKTDKQT 238
Query: 365 VRARRGQAT-NSHSLA 379
+ G+ + NSH A
Sbjct: 239 TQQGNGEKSENSHFFA 254
>TAIR|locus:2199307 [details] [associations]
symbol:AT1G68240 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009686 "gibberellin biosynthetic process" evidence=RCA]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC016447
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AJ577585 EMBL:AY735551
EMBL:AY735552 EMBL:AY924719 IPI:IPI00528459 IPI:IPI00657054
IPI:IPI00919318 PIR:H96705 RefSeq:NP_001031251.1 RefSeq:NP_176991.2
UniGene:At.35550 ProteinModelPortal:Q5XVH0 SMR:Q5XVH0
EnsemblPlants:AT1G68240.1 GeneID:843153 KEGG:ath:AT1G68240
TAIR:At1g68240 eggNOG:NOG270610 HOGENOM:HOG000095221 OMA:EGTHEEE
PhylomeDB:Q5XVH0 ProtClustDB:CLSN2681409 Genevestigator:Q5XVH0
Uniprot:Q5XVH0
Length = 185
Score = 110 (43.8 bits), Expect = 0.00062, P = 0.00062
Identities = 28/90 (31%), Positives = 48/90 (53%)
Query: 346 KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG-CSKV 404
K +P +E Y A+R ++ + E+ RR++I +++ LQ L+P C+K
Sbjct: 44 KNNDHEKHDEEPDEESYR--MAKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTK- 100
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSMKLAT 434
A L+ II Y++SL+ QV+ +SM T
Sbjct: 101 PDLASKLENIIEYIKSLKYQVDVMSMAYTT 130
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 118 (46.6 bits), Expect = 0.00064, P = 0.00064
Identities = 36/119 (30%), Positives = 63/119 (52%)
Query: 318 SGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRA----RRGQAT 373
SG+ K NQ KP+ + + +G Q + GS+ K E V A + A
Sbjct: 191 SGKTTKHT--NQTGSYPKPAVSDHSKSGNQ-QFGSERKRRRKLETTRVAAATKEKHHPAV 247
Query: 374 NSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 432
SH AE+ RREK++ R L+ +VP S++ KA +L + ++Y++SL+ +++ L ++
Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVPKVSRMD-KASLLSDAVSYIESLKSKIDDLETEI 305
>UNIPROTKB|Q9NZW4 [details] [associations]
symbol:DSPP "Dentin sialophosphoprotein" species:9606 "Homo
sapiens" [GO:0031214 "biomineral tissue development" evidence=IEA]
[GO:0071460 "cellular response to cell-matrix adhesion"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=TAS] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005509 "calcium ion binding"
evidence=TAS] [GO:0005518 "collagen binding" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=TAS]
[GO:0001503 "ossification" evidence=TAS] GO:GO:0005578
GO:GO:0005509 GO:GO:0001501 GO:GO:0005518 eggNOG:NOG12793
GO:GO:0031214 GO:GO:0001503 GO:GO:0005201 EMBL:AF163151
EMBL:AC093895 EMBL:AF094508 IPI:IPI00872967 RefSeq:NP_055023.2
UniGene:Hs.678914 ProteinModelPortal:Q9NZW4 STRING:Q9NZW4
PhosphoSite:Q9NZW4 DMDM:215273974 PaxDb:Q9NZW4 PRIDE:Q9NZW4
Ensembl:ENST00000282478 Ensembl:ENST00000399271 GeneID:1834
KEGG:hsa:1834 UCSC:uc003hqu.3 CTD:1834 GeneCards:GC04P088529
HGNC:HGNC:3054 HPA:HPA036230 MIM:125420 MIM:125485 MIM:125490
MIM:125500 MIM:605594 neXtProt:NX_Q9NZW4 Orphanet:1653
Orphanet:166260 Orphanet:166265 PharmGKB:PA27507 HOVERGEN:HBG098252
OMA:ERESKVQ OrthoDB:EOG41RPVG GenomeRNAi:1834 NextBio:7491
PMAP-CutDB:A8MUI0 ArrayExpress:Q9NZW4 Bgee:Q9NZW4 CleanEx:HS_DSPP
Genevestigator:Q9NZW4 GermOnline:ENSG00000152591 GO:GO:0071460
Uniprot:Q9NZW4
Length = 1301
Score = 123 (48.4 bits), Expect = 0.00080, P = 0.00080
Identities = 51/220 (23%), Positives = 94/220 (42%)
Query: 191 MQGPQEVF--AGNGLKSLSGGQSQKNEMN--VAEV--SKDASLSVEHG----ASNGSTLK 240
+QG + AG +S + G + KN N V + ++D ++ E G SN ST
Sbjct: 136 IQGQVSIIDNAGATNRSNTNGNTDKNTQNGDVGDAGHNEDVAVVQEDGPQVAGSNNSTDN 195
Query: 241 NERKGESLVNSHGEAKQ---GVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSS 297
+ E+ + G + + + + EAE + G G+D + ++ + G PS G
Sbjct: 196 EDEIIENSCRNEGNTSEITPQINSKRNGTKEAEVTPGTGED--AGLDNSDGSPSGNGADE 253
Query: 298 KKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDP 357
+ + +G D E ++A G+ S +N++ Q DH + S G Q + DP
Sbjct: 254 DEDEGSGDD-EDEEAGNGKDSS----NNSKGQEGQDHGKEDDHDSSIG-QNSDSKEYYDP 307
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 397
+E H + + S + + + S+R++ Q L
Sbjct: 308 EGKEDPHNEVDGDKTSKSEENSAGIPEDNGSQRIEDTQKL 347
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 116 (45.9 bits), Expect = 0.00081, P = 0.00081
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+R H LAER RREK+S+R L +VPG K+ KA +L + I YV+ LQ QV+
Sbjct: 173 SRPASQNQEHILAERKRREKLSQRFIALSKIVPGLKKMD-KASVLGDAIKYVKQLQDQVK 231
Query: 427 FL 428
L
Sbjct: 232 GL 233
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 116 (45.9 bits), Expect = 0.00084, P = 0.00084
Identities = 31/90 (34%), Positives = 52/90 (57%)
Query: 340 GNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVP 399
G+ G Q + G T+ +E + +A A+ SHS AER RRE+I+ + L+ ++P
Sbjct: 148 GSGPFGLQAELGKMTA----QEIMDAKALA--ASKSHSEAERRRRERINNHLAKLRSILP 201
Query: 400 GCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
+K T KA +L E+I +V+ L+R+ +S
Sbjct: 202 NTTK-TDKASLLAEVIQHVKELKRETSVIS 230
>DICTYBASE|DDB_G0271670 [details] [associations]
symbol:DDB_G0271670 species:44689 "Dictyostelium
discoideum" [GO:0005576 "extracellular region" evidence=IEA]
dictyBase:DDB_G0271670 GO:GO:0005576 EMBL:AAFI02000006
ProtClustDB:CLSZ2431310 RefSeq:XP_645495.1
ProteinModelPortal:Q75JC9 EnsemblProtists:DDB0168484 GeneID:8618123
KEGG:ddi:DDB_G0271670 OMA:EITNEEP Uniprot:Q75JC9
Length = 374
Score = 116 (45.9 bits), Expect = 0.00087, P = 0.00087
Identities = 51/313 (16%), Positives = 104/313 (33%)
Query: 49 NPLGVGSSSCSSAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASL 108
N L SSS SS+ S + + ++S S + + ++SSS++ SS+S
Sbjct: 61 NILDTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 120
Query: 109 RSCIDRPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNF 168
S + +SS ++ S S + S+ ++ SS S +
Sbjct: 121 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 180
Query: 169 CDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLS 228
++ + + S + + S S S + + + S +S S
Sbjct: 181 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 240
Query: 229 VEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGG 288
+S+ S+ + S +S + +S S + S S+ +
Sbjct: 241 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 300
Query: 289 EPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQG 348
S+ SS + + SS ++ ++ + SS+ + S+
Sbjct: 301 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 360
Query: 349 KQGSQTSDPPKEE 361
S +S E
Sbjct: 361 SSSSSSSSSSSGE 373
>RGD|3092 [details] [associations]
symbol:Mitf "microphthalmia-associated transcription factor"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISO] [GO:0006461 "protein complex
assembly" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0030154 "cell differentiation" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IEA;ISO]
[GO:0030318 "melanocyte differentiation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=IEA;ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IEA;ISO]
[GO:0043473 "pigmentation" evidence=ISO] [GO:0045165 "cell fate
commitment" evidence=IEA;ISO] [GO:0045670 "regulation of osteoclast
differentiation" evidence=IEA;ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046849 "bone remodeling" evidence=IEA;ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234
GO:GO:0006461 GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010 GO:GO:0045670
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014 GO:GO:0030318
GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286 HOGENOM:HOG000231368
OrthoDB:EOG495ZRR EMBL:AF029886 IPI:IPI00563001 UniGene:Rn.31427
ProteinModelPortal:O88368 STRING:O88368 UCSC:RGD:3092
InParanoid:O88368 ArrayExpress:O88368 Genevestigator:O88368
GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 94 (38.1 bits), Expect = 0.00093, P = 0.00093
Identities = 29/98 (29%), Positives = 47/98 (47%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT---GKAVMLDEI 414
P E A+ Q ++H+L ER RR I++R+K L L+P + K +L
Sbjct: 7 PTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 66
Query: 415 INYVQSLQRQ------VEFLSMKLATVNPRLDFNIEEL 446
++Y++ LQR+ +E KL N L ++EL
Sbjct: 67 VDYIRKLQREQQRAKDLENRQKKLEHANRHLLLRVQEL 104
>UNIPROTKB|O88368 [details] [associations]
symbol:Mitf "Microphthalmia-associated transcription
factor" species:10116 "Rattus norvegicus" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234 GO:GO:0006461
GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010
GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
GO:GO:0030318 GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286
HOGENOM:HOG000231368 OrthoDB:EOG495ZRR EMBL:AF029886
IPI:IPI00563001 UniGene:Rn.31427 ProteinModelPortal:O88368
STRING:O88368 UCSC:RGD:3092 InParanoid:O88368 ArrayExpress:O88368
Genevestigator:O88368 GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 94 (38.1 bits), Expect = 0.00093, P = 0.00093
Identities = 29/98 (29%), Positives = 47/98 (47%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT---GKAVMLDEI 414
P E A+ Q ++H+L ER RR I++R+K L L+P + K +L
Sbjct: 7 PTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 66
Query: 415 INYVQSLQRQ------VEFLSMKLATVNPRLDFNIEEL 446
++Y++ LQR+ +E KL N L ++EL
Sbjct: 67 VDYIRKLQREQQRAKDLENRQKKLEHANRHLLLRVQEL 104
>UNIPROTKB|F1MDC1 [details] [associations]
symbol:LOC505941 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR007794 Pfam:PF05104 GO:GO:0015031
GO:GO:0030176 OMA:QNQAKKG GeneTree:ENSGT00530000063895
EMBL:DAAA02035709 EMBL:DAAA02035710 EMBL:DAAA02035711
IPI:IPI00924056 Ensembl:ENSBTAT00000061585 ArrayExpress:F1MDC1
Uniprot:F1MDC1
Length = 1554
Score = 123 (48.4 bits), Expect = 0.00098, P = 0.00098
Identities = 44/184 (23%), Positives = 78/184 (42%)
Query: 186 RGRGMM-QGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERK 244
+G G QG + A N K G Q+Q + A+ + ++ +N+ K
Sbjct: 231 KGEGAQNQGKKGEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGK 290
Query: 245 GESLVNSHGEAKQGVGASGGDSDEAEFSGG---GGQDEPSAVEGTGGE-PSAKGLSSKKR 300
+ G+ +G G S+ A+ G G Q++ VEG + A+G ++ +
Sbjct: 291 KAEGAQNQGKKSEGAQNQGKKSEGAQNQGKKAEGAQNQGKKVEGAQNQGKKAEGAQNQGK 350
Query: 301 KRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAG--KQGK--QGSQTSD 356
K G + +A+G Q+ G+ + + +NQ K + G K+ G QGK +G+Q
Sbjct: 351 KVEGAQNQGKKAEGAQNQGKKS-EGAQNQGKKGEGAQNQGKKAEGAQNQGKKSEGAQNQG 409
Query: 357 PPKE 360
E
Sbjct: 410 KKSE 413
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.128 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 523 513 0.00088 119 3 11 23 0.37 35
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 123
No. of states in DFA: 616 (65 KB)
Total size of DFA: 278 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.85u 0.11s 53.96t Elapsed: 00:00:02
Total cpu time: 53.86u 0.11s 53.97t Elapsed: 00:00:02
Start: Sat May 11 12:23:26 2013 End: Sat May 11 12:23:28 2013
WARNINGS ISSUED: 1