BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009904
(523 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/525 (70%), Positives = 424/525 (80%), Gaps = 8/525 (1%)
Query: 1 MDMSDKDKFVLEKRNDNPMDYHSP-NMSSDWQFSGANLANAALNLVPTGNPLGV------ 53
MDMSD DK LEKR DNP++YHSP NM+SDW+F +N+ N +L LVPT N + V
Sbjct: 1 MDMSDMDKLELEKRGDNPINYHSPANMTSDWRFGSSNITNTSLGLVPTDNQMPVCRGDLL 60
Query: 54 GSSSCSSAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSCID 113
G+SSCS+A MVDSF +WDH TNS +LG+C+I+ Q++ S+SN +G RK SLR D
Sbjct: 61 GASSCSTASMVDSFGPGLWDHSTNSLNLGFCDINVQNHPSTSNTIGHRKSGPTSLRVGTD 120
Query: 114 RPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMN 173
+ L +GWNP SSM+KGGIFLP+APG+ PQSLSQFPADSAFIERAARFS F+GGNF DMMN
Sbjct: 121 KALQMGWNPPSSMLKGGIFLPSAPGVLPQSLSQFPADSAFIERAARFSCFNGGNFSDMMN 180
Query: 174 TFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGA 233
FG PE GLYSR GMMQGPQEVFA +GLK+++GGQ Q N V E SKDAS+S+EH A
Sbjct: 181 PFGIPESMGLYSRSGGMMQGPQEVFAASGLKTVTGGQGQNNVTIVGETSKDASMSIEHVA 240
Query: 234 SNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAK 293
G LKNERK +SLV S+ EAKQG G SG +S+EAEFSGGGGQ+E S +EG G E SAK
Sbjct: 241 IEGP-LKNERKSDSLVRSNDEAKQGAGGSGDESEEAEFSGGGGQEEASTLEGNGMELSAK 299
Query: 294 GLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQ 353
L KKRKRNGQDIE DQAKG S EAAKDN E Q+KGD P+ST NK++GKQGKQGSQ
Sbjct: 300 SLGLKKRKRNGQDIELDQAKGNLQSVEAAKDNVEAQQKGDQTPTSTPNKTSGKQGKQGSQ 359
Query: 354 TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE
Sbjct: 360 ASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 419
Query: 414 IINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYP 473
IINYVQSLQRQVEFLSMKLATVNPRLDFNIE LLAKD+L SRA PSSTL FSPDM + YP
Sbjct: 420 IINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILHSRAVPSSTLAFSPDMIMAYP 479
Query: 474 PVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPSQV 518
P + SQ GL+ + PGM + SD+LRRTI+SQLTP++G FKEP+Q+
Sbjct: 480 PFNTSQPGLIQASFPGMESHSDVLRRTISSQLTPLSGVFKEPTQL 524
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/525 (70%), Positives = 431/525 (82%), Gaps = 10/525 (1%)
Query: 1 MDMSDKDKFVLEKRNDNPMDYHSPN-MSSDWQFSGANLANAALNLVPTGNPLGV------ 53
MDMSDKDKF L K NDNP++YHSP +SSDW+F+ ++ N++L LVP N + V
Sbjct: 1 MDMSDKDKFELGKSNDNPINYHSPGGLSSDWRFNSTSIPNSSLGLVPIDNQMSVCRGDLV 60
Query: 54 GSSSCSSAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSCID 113
G++SCSSA ++DSF +W+HPTNSQ+L +C+I+ Q+ ASSSN +GI KG+ ASLR+ ID
Sbjct: 61 GAASCSSASVIDSFGPAMWEHPTNSQNLVFCDINVQNIASSSNTVGIGKGAPASLRNGID 120
Query: 114 RPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMN 173
R L++GWNP +SM+KGG FLPNAPGM PQSLSQFPADSAFIERAARFS F+GG+F DM+N
Sbjct: 121 RTLEMGWNPPNSMLKGGNFLPNAPGMLPQSLSQFPADSAFIERAARFSCFNGGDFGDMVN 180
Query: 174 TFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGA 233
FG PE GL+SRG GMMQGP EVF G+G+KS+SGGQ+QKN MN E SKD S+SV+H A
Sbjct: 181 PFGVPESMGLFSRGGGMMQGPGEVFVGSGMKSVSGGQAQKNVMNAGEASKDVSMSVDHMA 240
Query: 234 SNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAK 293
+ GS LKNE K ESL S EAK+GVG SG DSDEAEFSGG GQDEPS +EG GE SAK
Sbjct: 241 TEGSPLKNETKRESLARSRDEAKKGVGGSGNDSDEAEFSGGSGQDEPSLLEGNCGELSAK 300
Query: 294 GLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQ 353
L SKKRKR+G+D E DQAKG + ++AK + E Q+KGD KP+ST +K++GKQGKQGSQ
Sbjct: 301 SLGSKKRKRSGEDAELDQAKG---TPQSAKGSPETQQKGDQKPTSTTSKASGKQGKQGSQ 357
Query: 354 TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
SD PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE
Sbjct: 358 GSDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 417
Query: 414 IINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYP 473
IINYVQSLQRQVEFLSMKLATVNPRLDFNIE LLAKD+LQSRA P S+L FS +MP+ YP
Sbjct: 418 IINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQSRAVPPSSLAFSSEMPMAYP 477
Query: 474 PVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPSQV 518
+HQSQ GL+ A PGM + SDI+RRTINSQLT MT GFKEP+Q+
Sbjct: 478 ALHQSQPGLIPTAFPGMESHSDIIRRTINSQLTAMTAGFKEPAQL 522
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/534 (69%), Positives = 423/534 (79%), Gaps = 23/534 (4%)
Query: 1 MDMSDKDKFVLEKRNDNPMDYHSPNMSSDWQFSGA--NLANAALNLVPTGNPLGV----- 53
MDMSDKDKF LEKR+ + ++YHS +MSSDW+F G NL N +++ V GNP+ V
Sbjct: 34 MDMSDKDKFELEKRSGDSLNYHSASMSSDWRFGGGGGNLTNTSMSTVQGGNPMAVCKGDL 93
Query: 54 -GSSSCSSAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSCI 112
GSSSCSSA MVDSF +WDHP NSQ+LG+C+++ Q+NAS+S+ LGIRKG SLR I
Sbjct: 94 VGSSSCSSASMVDSFGPNLWDHPANSQTLGFCDMNVQNNASTSSTLGIRKGGPGSLRMDI 153
Query: 113 DRPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMM 172
D+ LDIGWNP SSM+KGGIFLPNAPGM PQ LSQFPADS FIERAARFS F+GGNF DMM
Sbjct: 154 DKTLDIGWNPPSSMLKGGIFLPNAPGMLPQGLSQFPADSGFIERAARFSCFNGGNFSDMM 213
Query: 173 NTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHG 232
N F PE YSRG GM+Q Q+VFA NGLKS+ GGQSQK+E ++AE+SKD S +V G
Sbjct: 214 NPFSIPESLNPYSRGGGMLQ--QDVFASNGLKSVPGGQSQKDEPSMAEISKDVSSAV-RG 270
Query: 233 ASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGG--QDEPSAVEGTGGEP 290
A GS LKNERK ESLV S EAKQG+G SG +SDEAEFSGGGG Q+EPS +EGTGGEP
Sbjct: 271 AMEGSPLKNERKSESLVKSLEEAKQGIGVSGNESDEAEFSGGGGGGQEEPSILEGTGGEP 330
Query: 291 SA-KGLSSKKRKRNGQDIEFDQAKGG-QSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQG 348
S+ KGL SKKRKR+GQD E DQ KG Q GEA+KDN E Q KGD PSS +K+ GK G
Sbjct: 331 SSGKGLGSKKRKRSGQDPEIDQVKGSPQQPGEASKDNPEIQHKGDQNPSSVPSKNTGKHG 390
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
KQG+Q SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA
Sbjct: 391 KQGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 450
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV--------LQSRAGPSS 460
VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE +L KDV LQSR GPSS
Sbjct: 451 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGMLGKDVSEIAXQKILQSRVGPSS 510
Query: 461 TLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKE 514
T+GFSP+ + YP +H SQ GL+ LPG+GN SD +RRTINSQL M+GG+KE
Sbjct: 511 TMGFSPETTMPYPQLHPSQPGLIQVGLPGLGNSSDAIRRTINSQLAAMSGGYKE 564
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 325/516 (62%), Positives = 370/516 (71%), Gaps = 67/516 (12%)
Query: 1 MDMSDKDKFVLEKRNDNPMDYHSPNMSSDWQFSGANLANAALNLVPTGNPLGVGSSSCSS 60
MDMSDKDKF LEKR+ + ++YHS +MSSDW+F G + VGSSSCSS
Sbjct: 1 MDMSDKDKFELEKRSGDSLNYHSASMSSDWRFGGVCKGDL------------VGSSSCSS 48
Query: 61 APMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSCIDRPLDIGW 120
A MVDSF +WDHP NSQ+LG+C+++ Q+NAS+S+ LGIRKG SLR ID+ LDIGW
Sbjct: 49 ASMVDSFGPNLWDHPANSQTLGFCDMNVQNNASTSSTLGIRKGGPGSLRMDIDKTLDIGW 108
Query: 121 NPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEP 180
NP SSM+KGGIFLPNAPGM PQ LSQFPADS FIERAARFS F+GGNF DMMN F PE
Sbjct: 109 NPPSSMLKGGIFLPNAPGMLPQGLSQFPADSGFIERAARFSCFNGGNFSDMMNPFSIPES 168
Query: 181 TGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLK 240
YSRG GM+Q Q+VFA NGLKS+ GGQSQK+E ++AE+SKD S S +
Sbjct: 169 LNPYSRGGGMLQ--QDVFASNGLKSVPGGQSQKDEPSMAEISKDVS----------SAKQ 216
Query: 241 NERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSA-KGLSSKK 299
N+ G GEPS+ KGL SKK
Sbjct: 217 NKELG-----------------------------------------CGEPSSGKGLGSKK 235
Query: 300 RKRNGQDIEFDQAKGG-QSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPP 358
RKR+GQD E DQ KG Q GEA+KDN E Q KGD PSS +K+ GK GKQG+Q SDPP
Sbjct: 236 RKRSGQDPEIDQVKGSPQQPGEASKDNPEIQHKGDQNPSSVPSKNTGKHGKQGAQASDPP 295
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV
Sbjct: 296 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 355
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQS 478
QSLQRQVEFLSMKLATVNPRLDFNIE +L KD+LQSR GPSST+GFSP+ + YP +H S
Sbjct: 356 QSLQRQVEFLSMKLATVNPRLDFNIEGMLGKDILQSRVGPSSTMGFSPETTMPYPQLHPS 415
Query: 479 QAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKE 514
Q GL+ LPG+GN SD +RRTINSQL M+GG+KE
Sbjct: 416 QPGLIQVGLPGLGNSSDAIRRTINSQLAAMSGGYKE 451
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 314/530 (59%), Positives = 379/530 (71%), Gaps = 33/530 (6%)
Query: 3 MSDKDKFVLEKRNDNPMDYHSPNMSSDWQFSGANLANAALNLVPTGNPLG-------VGS 55
MSDK+KF ++ RN++ + Y S M SDW+F G+NLAN+++ V GN +GS
Sbjct: 1 MSDKEKFEVD-RNEDHVSYSS-GMHSDWRFGGSNLANSSVGFVGLGNNSMNVSRGDLIGS 58
Query: 56 SSCSSAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHN-ASSSNALGIRKGSSASLRSCIDR 114
SSCSSA MVDS + W++PT+SQ LG+C+I+ HN SS+ + IRK R D
Sbjct: 59 SSCSSASMVDSLSPNYWENPTSSQKLGFCDINNVHNNGGSSSTVAIRKDGFGFGRVGQDH 118
Query: 115 --PLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMM 172
L++GWN A+SM LPN P MFP SLSQFP DS FIERAARFS FSGGNF DM+
Sbjct: 119 HGTLEMGWNHANSM------LPNGPVMFPHSLSQFPTDSGFIERAARFSCFSGGNFGDMV 172
Query: 173 NTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKS-LSGGQSQKNEMNVAEVSKDASLSVEH 231
N++G + GLY G ++ AG+GLKS ++GGQSQ +MNV E D SVEH
Sbjct: 173 NSYGIAQSMGLY--------GARDAIAGHGLKSVIAGGQSQGGDMNVVE---DVPPSVEH 221
Query: 232 -GASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSG-GGGQDEPSAVEGTGGE 289
A+ GS LK++R+ E V E KQ + + +SD AE S GGGQD+ +EGT GE
Sbjct: 222 LVAAKGSPLKSDRRSEGHVIFQDEGKQSLVRNANESDRAESSDDGGGQDDSPMLEGTSGE 281
Query: 290 PSAKGLSSKKRKRNGQDIEFDQAKGGQS-SGEAAKDNTENQRKGDHKPSSTGNKSAGKQG 348
PS+KGL+SKKRKR+G+D + D+A G Q E AK N+ENQ+KGD +P ST NK+ GK
Sbjct: 282 PSSKGLNSKKRKRSGRDGDNDKANGAQELPSEGAKGNSENQQKGDQQPISTANKACGKNA 341
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
K GSQ SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA
Sbjct: 342 KLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 401
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDM 468
VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE LLAKD+LQ R PS+ LGF DM
Sbjct: 402 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQQRPDPSTALGFPLDM 461
Query: 469 PLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPSQV 518
+ +PP+H Q GL+H +P M N SDIL+RTI+ QL P+ GGFKEP+Q+
Sbjct: 462 SMAFPPLHPPQPGLIHPVIPNMTNSSDILQRTIHPQLAPLNGGFKEPNQL 511
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 294/528 (55%), Positives = 360/528 (68%), Gaps = 17/528 (3%)
Query: 1 MDMSDKDKFVLEKRNDNPMDYHSPNMSSDWQFSGANLANAALNLVPTGNPLGVGS----- 55
MD+ D+DKF LE ++ ++ S +MSSDWQF L LV GN V +
Sbjct: 1 MDIGDRDKFRLESSIEDTINC-SNSMSSDWQFGETTLTTMPTGLVLPGNVDVVRNQDMVG 59
Query: 56 SSCSSAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSC--ID 113
S S+A MV+SF+ TIW+ + Q+LG NI + +++SN +GI K S + S ID
Sbjct: 60 CSSSTASMVESFSSTIWEQSAHCQNLGISNIQGHNISNTSNIIGISKASGCPVSSSSDID 119
Query: 114 RPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMN 173
R LDI WN + +M+KGG++LPN PGM P SLSQ PADS+FIERAAR S FSGGNF +
Sbjct: 120 RTLDISWNLSHNMLKGGVYLPNFPGMLPPSLSQLPADSSFIERAARLSCFSGGNFGGDVG 179
Query: 174 TFGTPEPTGLYSRGRGMMQGPQEVFAGNGL--KSLSGGQSQKNEMNVAEVSKDASLSVEH 231
F P+P G++SRG G++ + NGL S +GGQSQ+N +N +E S L+ EH
Sbjct: 180 HFNVPDPVGVFSRGMGVIPERWDEIPRNGLGLASGTGGQSQRNVVN-SESSMPVCLTNEH 238
Query: 232 GASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPS 291
GA T ++ K S + G K V S +SDEAE SGG G EP +E TG E S
Sbjct: 239 GA----TERDSPKNGSPLKLDGRGKLAVDGSANESDEAECSGGDGLGEPCTLEATGKELS 294
Query: 292 AKGLSSKKRKRNGQDIEFDQAKGG-QSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQ 350
KGL ++KRKR+GQ E DQA G Q + + KD+ E QRK D P+ST NK GK GKQ
Sbjct: 295 TKGLGTRKRKRSGQKTELDQANGPLQQTTVSPKDDAETQRKRDQNPNSTANKGTGKHGKQ 354
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
SQ SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSKVTGKAVM
Sbjct: 355 ASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVM 414
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPL 470
LDEIINYVQSLQRQVEFLSMKLATVNPRLD NI+ ++AKD+LQSR GP STLGFS MP+
Sbjct: 415 LDEIINYVQSLQRQVEFLSMKLATVNPRLDINIDGVVAKDILQSRVGPLSTLGFSSHMPV 474
Query: 471 VYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPSQV 518
PP H S L+ + P +G+ S++LR T+NS +TP +GGFK PSQ+
Sbjct: 475 ACPPPHISHHELIPTSFPAIGS-SEMLRSTMNSHMTPRSGGFKNPSQI 521
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 276/528 (52%), Positives = 337/528 (63%), Gaps = 61/528 (11%)
Query: 1 MDMSDKDKFVLEKRNDNPMDYHSPNMSSDWQFSGANLANAALNLVPTGNPLGVGS----- 55
MD+ D+DKF LE ++ ++ S +MSSDWQF L LV GN V +
Sbjct: 1 MDIGDRDKFRLESSIEDTINC-SNSMSSDWQFGETTLTTMPTGLVLPGNVDVVRNQDMVG 59
Query: 56 SSCSSAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSC--ID 113
S S+A MV+SF+ TIW+ + Q+LG NI + +++SN +GI K S + S ID
Sbjct: 60 CSSSTASMVESFSSTIWEQSAHCQNLGISNIQGHNISNTSNIIGISKASGCPVSSSSDID 119
Query: 114 RPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMN 173
R LDI WN + +M+KGG++LPN PGM P SLSQ PADS+FIERAAR S FSGGNF +
Sbjct: 120 RTLDISWNLSHNMLKGGVYLPNFPGMLPPSLSQLPADSSFIERAARLSCFSGGNFGGDVG 179
Query: 174 TFGTPEPTGLYSRGRGMMQGPQEVFAGN--GLKSLSGGQSQKNEMNVAEVSKDASLSVEH 231
F P+P G++SRG G++ + N GL S +GGQSQ+N
Sbjct: 180 HFNVPDPVGVFSRGMGVIPERWDEIPRNGLGLASGTGGQSQRN----------------- 222
Query: 232 GASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPS 291
+VNS E+ G G EP +E TG E S
Sbjct: 223 ----------------VVNS----------------ESSMPRGDGLGEPCTLEATGKELS 250
Query: 292 AKGLSSKKRKRNGQDIEFDQAKGG-QSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQ 350
KGL ++KRKR+GQ E DQA G Q + + KD+ E QRK D P+ST NK GK GKQ
Sbjct: 251 TKGLGTRKRKRSGQKTELDQANGPLQQTTVSPKDDAETQRKRDQNPNSTANKGTGKHGKQ 310
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
SQ SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSKVTGKAVM
Sbjct: 311 ASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVM 370
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPL 470
LDEIINYVQSLQRQVEFLSMKLATVNPRLD NI+ ++AKD+LQSR GP STLGFS MP+
Sbjct: 371 LDEIINYVQSLQRQVEFLSMKLATVNPRLDINIDGVVAKDILQSRVGPLSTLGFSSHMPV 430
Query: 471 VYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPSQV 518
PP H S L+ + P +G+ S++LR T+NS +TP +GGFK PSQ+
Sbjct: 431 ACPPPHISHHELIPTSFPAIGS-SEMLRSTMNSHMTPRSGGFKNPSQI 477
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/383 (65%), Positives = 296/383 (77%), Gaps = 12/383 (3%)
Query: 139 MFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVF 198
MFP +LSQFP DS FIERAARFS FSGGNF DM+N++G + GLY G ++
Sbjct: 1 MFPHTLSQFPTDSGFIERAARFSCFSGGNFSDMVNSYGIAQSMGLY--------GARDAI 52
Query: 199 AGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEH-GASNGSTLKNERKGESLVNSHGEAKQ 257
AG+G+KS++GGQSQ +MNV E +KD S SVEH A+ GS LK++R+ E V S E KQ
Sbjct: 53 AGHGMKSVTGGQSQGGDMNVVEATKDVSPSVEHLVAAKGSPLKSDRRSEGHVISQDEGKQ 112
Query: 258 GVGASGGDSDEAEFSG-GGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQ 316
+ +SD AE S GGGQD+ +EGT GEPS+KGL++KKRKR+GQD + D+A G Q
Sbjct: 113 SLVRPANESDRAESSDDGGGQDDSPMLEGTSGEPSSKGLNTKKRKRSGQDGDNDKANGAQ 172
Query: 317 S-SGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNS 375
E A+DN ENQ+KGDH+P+ST K++GK K GSQ SDPPKEEYIHVRARRGQATNS
Sbjct: 173 ELPSEGAEDNYENQQKGDHQPTSTA-KASGKNAKLGSQASDPPKEEYIHVRARRGQATNS 231
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 435
HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV
Sbjct: 232 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 291
Query: 436 NPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSD 495
NPRLDFNIE LLAKD+LQ R GPSS LGF DM + +PP+H Q GL+H +P M N SD
Sbjct: 292 NPRLDFNIEGLLAKDILQQRPGPSSALGFPLDMSMAFPPLHPPQPGLIHPVIPNMANSSD 351
Query: 496 ILRRTINSQLTPMTGGFKEPSQV 518
IL+RTI+ QL P+ GG KEP+Q+
Sbjct: 352 ILQRTIHPQLAPLNGGLKEPNQL 374
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 288/526 (54%), Positives = 337/526 (64%), Gaps = 43/526 (8%)
Query: 3 MSDKDKFVLEKRNDNPMDYHSPNMSSDWQFSGANLANAALNLVPTGNPLGV-----GSSS 57
M+ KD+F +E R +PM ++SS WQF+ NL N ++ TGNP V G SS
Sbjct: 1 MNGKDEFEVENRTSDPM-----SISSAWQFAAPNLTNESVGFDSTGNPSVVSNGDLGVSS 55
Query: 58 CSSAPMVDSFNQTIWDHPTNSQSLGYCN-IDAQHNASSSNALGIRKGSSASLRSCID-RP 115
C S M + F + +H T SQ+ G+C + Q++ +SN + SLRS D R
Sbjct: 56 CPSTSMSNLFTPALLNHHTESQNSGFCTTFNEQNSIVTSNTTLVDGEDLNSLRSNGDTRT 115
Query: 116 LDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNF-CDMMNT 174
L + WN + +KG +F N PG+FP +LSQ PADSAFIERAARFS F+ G F
Sbjct: 116 LGMDWNQQNPWMKG-VFSGNVPGIFPPNLSQLPADSAFIERAARFSCFNNGVFGAPPAGP 174
Query: 175 FGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGAS 234
FG + G++S G G G QEV + NG VSKD SL +E A
Sbjct: 175 FGISDSLGIHSGG-GF--GRQEVISRNG------------------VSKDVSLPMELEAE 213
Query: 235 NGSTLKNERKGESLVNSHGEAKQG-VGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAK 293
S KNE+ E S AKQG VG SG DSDEA FSGG QDE + GT EPS +
Sbjct: 214 EKSPPKNEKDSEM---SQDRAKQGCVGESGNDSDEAGFSGG--QDEQCTMGGTMTEPSTE 268
Query: 294 GLSSKKRKRNGQDIEFDQAKGG-QSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGS 352
GL KKRKR Q++ Q K Q E AK+ NQ+KG PSST +K AGKQGKQ S
Sbjct: 269 GLCFKKRKRGEQNVGLGQVKEAPQQINETAKNGAFNQQKGGQNPSSTTSKPAGKQGKQDS 328
Query: 353 QTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 412
Q SD PKEEYIHVRARRGQATNSHSLAERVRREKISERM+ LQDLVPGCSKVTGKAVMLD
Sbjct: 329 QPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLD 388
Query: 413 EIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVY 472
EIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELL K+ +QS+AGP S GF PDMP+ Y
Sbjct: 389 EIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLTKEFIQSKAGP-SLFGFPPDMPVPY 447
Query: 473 PPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPSQV 518
P H S GL+ LP MG+ D+LRRTINSQLT + GGFKEP Q+
Sbjct: 448 LPQHSSHHGLIPPCLPTMGSSPDLLRRTINSQLTSLVGGFKEPVQL 493
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 287/526 (54%), Positives = 336/526 (63%), Gaps = 43/526 (8%)
Query: 3 MSDKDKFVLEKRNDNPMDYHSPNMSSDWQFSGANLANAALNLVPTGNPLGV-----GSSS 57
M+ KD+F +E R +PM ++SS WQF+ NL N ++ TGNP V G SS
Sbjct: 1 MNGKDEFEVENRTSDPM-----SISSAWQFAAPNLTNESVGFDSTGNPSVVSNGDLGVSS 55
Query: 58 CSSAPMVDSFNQTIWDHPTNSQSLGYCN-IDAQHNASSSNALGIRKGSSASLRSCID-RP 115
C S M + F + +H T SQ+ G+C + Q++ +SN + SLRS D R
Sbjct: 56 CPSTSMSNLFTPALLNHHTESQNSGFCTTFNEQNSIVTSNTTLVDGEDLNSLRSNGDTRT 115
Query: 116 LDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNF-CDMMNT 174
L + WN + +KG +F N PG+FP +LSQ PADSAFIERAARFS F+ G F
Sbjct: 116 LGMDWNQQNPWMKG-VFSGNVPGIFPPNLSQLPADSAFIERAARFSCFNNGVFGAPPAGP 174
Query: 175 FGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGAS 234
FG + G++S G G G QEV + NG VSKD SL +E A
Sbjct: 175 FGISDSLGIHSGG-GF--GRQEVISRNG------------------VSKDVSLPMELEAE 213
Query: 235 NGSTLKNERKGESLVNSHGEAKQG-VGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAK 293
S KNE+ E S AKQG VG SG DSDEA FSGG QDE + GT EPS +
Sbjct: 214 EKSPPKNEKDSEM---SQDRAKQGCVGESGNDSDEAGFSGG--QDEQCTMGGTMTEPSTE 268
Query: 294 GLSSKKRKRNGQDIEFDQAKGG-QSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGS 352
GL KKRKR Q++ Q K Q E AK+ NQ+KG PSST +K AGKQGKQ S
Sbjct: 269 GLCFKKRKRGEQNVGLGQVKEAPQQINETAKNGAFNQQKGGQNPSSTTSKPAGKQGKQDS 328
Query: 353 QTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 412
Q SD PKEEYIHVRARRGQATNSHSLAERVRREKISERM+ LQDLVPGCSKVTGKAVMLD
Sbjct: 329 QPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLD 388
Query: 413 EIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVY 472
EIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELL K+ +QS+AGP S GF PDMP+ Y
Sbjct: 389 EIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLTKEFIQSKAGP-SLFGFPPDMPVPY 447
Query: 473 PPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPSQV 518
P H S GL+ LP MG+ D+LRR INSQLT + GGFKEP Q+
Sbjct: 448 LPQHSSHHGLIPPCLPTMGSSPDLLRRAINSQLTSLVGGFKEPVQL 493
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 253/494 (51%), Positives = 319/494 (64%), Gaps = 55/494 (11%)
Query: 29 DWQFSGANLANAALNLVPTGNPLGVGSSSCSSAPMVDSFNQTIWDHPTNSQSLG-YCNID 87
DW+F NLAN+++ LV N + +G+SSC ++ MVDS+ D TNS++LG +C+++
Sbjct: 17 DWRFVSGNLANSSVGLVSMENSM-MGTSSCPNS-MVDSYGPNFLDLLTNSENLGGFCDVN 74
Query: 88 AQHNASSSNALGIRKGSSASLRSCIDRPLDIGWNP-ASSMIKGGIFLPNAPGMFPQSLSQ 146
Q N + G + C DR + +GW+ +SSMIK LPN +FPQSLSQ
Sbjct: 75 GQSNEVRKDGFGFAR------VGCDDRTVGMGWDLGSSSMIKRDGVLPNGAEIFPQSLSQ 128
Query: 147 FPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSL 206
F DS F++ AAR S FS G+F DMMN+ G P+ L P V
Sbjct: 129 FSTDSGFVD-AARMSCFSAGSFVDMMNSCGIPQSMAL----------PLHV--------- 168
Query: 207 SGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDS 266
S SVEH S+GS ++N+R+ + V S E KQ +G S ++
Sbjct: 169 -------------------SRSVEHLGSDGSPIQNDRRSDCPVMSQDEGKQVLGRSCNEA 209
Query: 267 DEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGG-QSSGEAAKDN 325
D E SG G ++ GEPS KGL+ KKRKRNGQD + D+A G + E AKDN
Sbjct: 210 DGDESSGDDGS---QMLDCASGEPSIKGLNPKKRKRNGQDGDSDKATGTLELPSETAKDN 266
Query: 326 TENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRRE 385
E+++KG + SST K++GK KQGSQ SDPP E Y+HVRARRGQATNSHSLAERVRRE
Sbjct: 267 CESRKKGKQQTSSTA-KASGKNAKQGSQASDPPNEGYVHVRARRGQATNSHSLAERVRRE 325
Query: 386 KISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEE 445
KISERMKFLQDLVPGC+KVTGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP +DFN+E
Sbjct: 326 KISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPHVDFNMER 385
Query: 446 LLAKDVLQSRAGPSSTLGFSPDMPLVYPPV-HQSQAGLMHGALPGMGNPSDILRRTINSQ 504
LL KD+LQ + GPSS LGF +MP+ +PP+ H Q GL+H LP M N SD+LR+T+ Q
Sbjct: 386 LLPKDILQHQPGPSSALGFLREMPMAFPPLSHSYQPGLIHSTLPNMANLSDMLRQTVQPQ 445
Query: 505 LTPMTGGFKEPSQV 518
L P+ GGFKEP+QV
Sbjct: 446 LEPLAGGFKEPNQV 459
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/308 (74%), Positives = 245/308 (79%), Gaps = 5/308 (1%)
Query: 216 MNVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGG 275
MN E SKD S+SV H A+ GS LKNE K ESL S EAKQG+G SG DSDEAEFSGGG
Sbjct: 1 MNAVEASKDVSMSVNHMATEGSPLKNETKSESLARSRDEAKQGMGGSGNDSDEAEFSGGG 60
Query: 276 GQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHK 335
GQDEPS +EG E SAK L S KRKRNGQD E DQAKG S E AK + E Q+KGD K
Sbjct: 61 GQDEPSMLEGNCRELSAKSLGSNKRKRNGQDAELDQAKGTPQSAEPAKGSPETQQKGDQK 120
Query: 336 PSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ 395
P+ST +K AGKQGKQGS SD PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ
Sbjct: 121 PTSTTSKDAGKQGKQGSLGSDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ 180
Query: 396 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV---- 451
DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD NIE LLAKDV
Sbjct: 181 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLAKDVFDPK 240
Query: 452 -LQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTG 510
LQ A P S+L FS +MP+ YPP H SQAGL+ A PGM N SDI+ RTINSQLTPMT
Sbjct: 241 ILQLHAVPPSSLAFSLEMPMAYPPSHPSQAGLIPTAFPGMNNHSDIICRTINSQLTPMTA 300
Query: 511 GFKEPSQV 518
GFKEP+Q+
Sbjct: 301 GFKEPAQL 308
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 265/518 (51%), Positives = 319/518 (61%), Gaps = 83/518 (16%)
Query: 1 MDMSDKDKFVLEKRNDNPMDYHSPNM-SSDWQFSGANLANAALNLVPTGNPLGVGSSSCS 59
MD+S KD+F EKRN P +Y S N S DW+ ++ P+ N + G +SCS
Sbjct: 1 MDLSAKDEFSAEKRN--PDNYDSVNNPSGDWR----------VDSYPSENLISAGPASCS 48
Query: 60 SAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSCIDRPLDIG 119
+ M+DSF QT+W PT+ Q++GY + NASSS S R IDR L++G
Sbjct: 49 PSQMMDSFGQTLWYDPTSVQAVGYAGFNG-GNASSS-----------SFRGSIDRSLEMG 96
Query: 120 WN-PASSMIKG-GIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNT-FG 176
WN P KG G+FLPNA P S++QFPADS FIERAARFS FSGGNF DM+N G
Sbjct: 97 WNLPNLLPPKGNGLFLPNASSFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLG 156
Query: 177 TPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNG 236
E GL+ +G G MQG Q Q NE+NV E D S++V+
Sbjct: 157 NSEAIGLFLQGGGTMQG----------------QCQSNELNVGEPHNDVSVAVK------ 194
Query: 237 STLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLS 296
ES V S +AK V SG S++ + SGG GQ G E S+ +
Sbjct: 195 ---------ESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQ--------KGRETSS---N 234
Query: 297 SKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKS-AGKQGKQGSQTS 355
+KKRKRNGQ+ E Q+ Q S E +N + +R + P+S G KS +GKQ QG Q+S
Sbjct: 235 TKKRKRNGQNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQ--QGKQSS 292
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
DPPK+ YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEII
Sbjct: 293 DPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 352
Query: 416 NYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPV 475
NYVQSLQRQVEFLSMKLATVNP++DFN+E LLAKD LQ RAG SST F P+M + YPP+
Sbjct: 353 NYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPPNMSMAYPPL 412
Query: 476 HQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFK 513
G M L +G RTI S L+PM GGFK
Sbjct: 413 PH---GFMQQTLSSIG-------RTITSPLSPMNGGFK 440
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 265/519 (51%), Positives = 319/519 (61%), Gaps = 84/519 (16%)
Query: 1 MDMSDKDKFVLEKRNDNPMDYHSPNM-SSDWQFSGANLANAALNLVPTGNPLGVGSSSCS 59
MD+S KD+F EKRN P +Y S N S DW+ ++ P+ N + G +SCS
Sbjct: 1 MDLSAKDEFSAEKRN--PDNYDSVNNPSGDWR----------VDSYPSENLISAGPASCS 48
Query: 60 SAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSCIDRPLDIG 119
+ M+DSF QT+W PT+ Q++GY + NASSS S R IDR L++G
Sbjct: 49 PSQMMDSFGQTLWYDPTSVQAVGYAGFNG-GNASSS-----------SFRGSIDRSLEMG 96
Query: 120 WN-PASSMIKG-GIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNT-FG 176
WN P KG G+FLPNA P S++QFPADS FIERAARFS FSGGNF DM+N G
Sbjct: 97 WNLPNLLPPKGNGLFLPNASSFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLG 156
Query: 177 TPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNG 236
E GL+ +G G MQG Q Q NE+NV E D S++V+
Sbjct: 157 NSEAIGLFLQGGGTMQG----------------QCQSNELNVGEPHNDVSVAVK------ 194
Query: 237 STLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLS 296
ES V S +AK V SG S++ + SGG GQ G E S+ +
Sbjct: 195 ---------ESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQ--------KGRETSS---N 234
Query: 297 SKKRKRNGQ-DIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKS-AGKQGKQGSQT 354
+KKRKRNGQ + E Q+ Q S E +N + +R + P+S G KS +GKQ QG Q+
Sbjct: 235 TKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQ--QGKQS 292
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
SDPPK+ YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEI
Sbjct: 293 SDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 352
Query: 415 INYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPP 474
INYVQSLQRQVEFLSMKLATVNP++DFN+E LLAKD LQ RAG SST F P+M + YPP
Sbjct: 353 INYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPPNMSMAYPP 412
Query: 475 VHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFK 513
+ G M L +G RTI S L+PM GGFK
Sbjct: 413 LPH---GFMQQTLSSIG-------RTITSPLSPMNGGFK 441
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 263/519 (50%), Positives = 318/519 (61%), Gaps = 84/519 (16%)
Query: 1 MDMSDKDKFVLEKRNDNPMDYHSPNM-SSDWQFSGANLANAALNLVPTGNPLGVGSSSCS 59
MD+S KD+F EKRN P +Y S N S DW+ ++ P+ N + G +SCS
Sbjct: 1 MDLSAKDEFSAEKRN--PDNYDSVNNPSGDWR----------VDSYPSENLISAGPASCS 48
Query: 60 SAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSCIDRPLDIG 119
+ M+DSF QT+W PT+ Q++GY + NASSS S R IDR L++G
Sbjct: 49 PSQMMDSFGQTLWYDPTSVQAVGYAGFNG-GNASSS-----------SFRGSIDRSLEMG 96
Query: 120 WN-PASSMIKG-GIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNT-FG 176
WN P KG G+FLPNA P S++QFPADS FIERAARFS FSGGNF DM+N G
Sbjct: 97 WNLPNLLPPKGNGLFLPNASSFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLG 156
Query: 177 TPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNG 236
E GL+ +G G M G Q Q NE+NV E D S++V+
Sbjct: 157 NSEAIGLFLQGGGTMHG----------------QCQSNELNVGEPHNDVSVAVK------ 194
Query: 237 STLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLS 296
ES V S +A+ V SG S++ + SGG GQ G E S+ +
Sbjct: 195 ---------ESTVRSSEQAEPNVPGSGNVSEDTQSSGGNGQ--------KGRETSS---N 234
Query: 297 SKKRKRNGQ-DIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKS-AGKQGKQGSQT 354
+KKRKRNGQ + E Q+ Q S E +N + +R + P+S G KS +GKQ QG Q+
Sbjct: 235 TKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQ--QGKQS 292
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
SDPPK+ YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEI
Sbjct: 293 SDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 352
Query: 415 INYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPP 474
INYVQSLQRQVEFLSMKLATVNP++DFN+E LLAKD LQ RAG SST F P+M + YPP
Sbjct: 353 INYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPPNMSMSYPP 412
Query: 475 VHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFK 513
+ G M L +G RTI S L+PM GGFK
Sbjct: 413 LPH---GFMQQTLSSIG-------RTITSPLSPMNGGFK 441
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 259/520 (49%), Positives = 320/520 (61%), Gaps = 85/520 (16%)
Query: 1 MDMSDKDKFVLEKRNDNPMDYHSPNM-SSDWQFSGANLANAALNLVPTGNPLGVGSSSCS 59
MD+S+KD+F EKRN P +Y S N S DW+ ++ P+ N + G +SCS
Sbjct: 1 MDLSEKDEFSAEKRN--PDNYDSVNNPSGDWR----------VDSYPSENLISAGPASCS 48
Query: 60 SAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSCIDRPLDIG 119
+ M+DSF QT+W PT+ Q++GY + NASSS S R IDR L++G
Sbjct: 49 PSQMMDSFGQTLWYDPTSVQAMGYGGFNG-GNASSS-----------SFRGNIDRSLEMG 96
Query: 120 WN-PASSMIKG-GIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNT-FG 176
WN P KG G+FLPNA P S++QFPADS FIERAARFS FSGGNF DM+N G
Sbjct: 97 WNLPNLLPPKGNGLFLPNASTFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLG 156
Query: 177 TPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNG 236
PE GL+ +G G MQG Q Q +E+NV E D S +V+
Sbjct: 157 NPESIGLFLQGGGTMQG----------------QCQCDELNVGEPHNDVSTAVK------ 194
Query: 237 STLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLS 296
+ V S +AK V SG S++ + SGG G+ G E S+ +
Sbjct: 195 ---------DPTVRSCEQAKPNVPGSGNVSEDTQSSGGNGR--------KGRETSS---N 234
Query: 297 SKKRKRNGQ-DIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKS-AGKQGKQGSQT 354
+KKRKRNGQ + E Q+ Q S E +N + +R + P+S GNK+ +GK +QG Q+
Sbjct: 235 TKKRKRNGQVNSEAAQSHRSQQSEEEPDNNGDKKRNSEQSPNSPGNKTNSGK--RQGKQS 292
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
SD PK+ YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEI
Sbjct: 293 SDLPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 352
Query: 415 INYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLG-FSPDMPLVYP 473
INYVQSLQRQVEFLSMKLATVNP++DFN+E LLAKD LQ RAG SST F+P+M + YP
Sbjct: 353 INYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTTPFTPNMAMAYP 412
Query: 474 PVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFK 513
P+ G M L +G RTI+S L+ M GGFK
Sbjct: 413 PLPH---GFMQQTLSSIG-------RTISSPLSSMNGGFK 442
>gi|224101645|ref|XP_002312366.1| predicted protein [Populus trichocarpa]
gi|222852186|gb|EEE89733.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 195/314 (62%), Positives = 232/314 (73%), Gaps = 9/314 (2%)
Query: 1 MDMSDKDKFVLEKRNDNPMDYHSPN-MSSDWQFSGANLANAALNLVPTGNPLGVGSSSCS 59
MDMSDKDKF LE+ NDNP++Y SP MS D +F+ ++ N++L LVPT N + V +
Sbjct: 1 MDMSDKDKFELEESNDNPINYRSPGGMSLDRRFNSTSIPNSSLGLVPTDNQMSVCRGDLA 60
Query: 60 --------SAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSC 111
SA ++DSF +W+HPTNSQ+L +C+I+ Q+ ASSSN GI KG ASLR+
Sbjct: 61 EAVAASCSSASVIDSFGPAMWEHPTNSQNLVFCDINVQNIASSSNTAGIGKGFPASLRNG 120
Query: 112 IDRPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDM 171
IDR L++GWNP + M+KGG FLPNA GM PQSLSQFPADSAFIERAARFS F+GGNF DM
Sbjct: 121 IDRTLEMGWNPPNPMLKGGNFLPNASGMLPQSLSQFPADSAFIERAARFSCFNGGNFSDM 180
Query: 172 MNTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEH 231
N FG PE G++SRG GMMQGP EVF G+G+KS+SGG++ KN MN E SKD S+SV H
Sbjct: 181 GNPFGVPESMGIFSRGGGMMQGPGEVFMGSGMKSVSGGRAPKNVMNAVEASKDVSMSVNH 240
Query: 232 GASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPS 291
A+ GS LKNE K ESL S EAKQG+G SG DSDEAEFSGGGGQDEPS +EG E S
Sbjct: 241 MATEGSPLKNETKSESLARSRDEAKQGMGGSGNDSDEAEFSGGGGQDEPSMLEGNCRELS 300
Query: 292 AKGLSSKKRKRNGQ 305
AK L S KRKRNGQ
Sbjct: 301 AKSLGSNKRKRNGQ 314
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 177/402 (44%), Positives = 220/402 (54%), Gaps = 79/402 (19%)
Query: 128 KGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRG 187
+G FL PG Q L FP DS FIERAAR + F G
Sbjct: 459 RGAGFLAPVPGFLQQGLGHFPVDSGFIERAARSTCF-----------------------G 495
Query: 188 RGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERKGES 247
GMM G A + GG + E
Sbjct: 496 GGMMAGGPYGAADQAMGDAFGGTA----------------------------------EG 521
Query: 248 LVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDI 307
L++ H + VG +D+AE G G DE + E GG+ S+KG SKKR+R + +
Sbjct: 522 LMDHH----RNVG-----NDKAEEFAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVM 572
Query: 308 EFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRA 367
DQ ++A ++ ++ KG+ +T N K +TS+ KEEYIHVRA
Sbjct: 573 GTDQVHSSNLPSDSANESVHSKDKGEESSPATTNGGKSKGKGA-KETSESQKEEYIHVRA 631
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RRGQATNSHSLAER+RREKISERMK LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF
Sbjct: 632 RRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 691
Query: 428 LSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGAL 487
LSMKLATVNPRLD NIE LL+KD+L+ PSS++GFSP+M ++P + SQ GL+HG
Sbjct: 692 LSMKLATVNPRLDLNIEGLLSKDLLRFPGVPSSSIGFSPEM--MHPQLQLSQPGLIHGGT 749
Query: 488 PGMGNPSDILRRTINSQL---------TPMTGGFKEPSQVSF 520
GM NP D+ RR I +QL + G F + SQ+++
Sbjct: 750 AGMANP-DVFRRIIQAQLGAKDGSQMPHSLNGSFSDVSQMAY 790
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/402 (44%), Positives = 220/402 (54%), Gaps = 79/402 (19%)
Query: 128 KGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRG 187
+G FL PG Q L FP DS FIERAAR + F G
Sbjct: 78 RGAGFLAPVPGFLQQGLGHFPVDSGFIERAARSTCF-----------------------G 114
Query: 188 RGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERKGES 247
GMM G A + GG + E
Sbjct: 115 GGMMAGGPYGAADQAMGDAFGGTA----------------------------------EG 140
Query: 248 LVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDI 307
L++ H + VG +D+AE G G DE + E GG+ S+KG SKKR+R + +
Sbjct: 141 LMDHH----RNVG-----NDKAEEFAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVM 191
Query: 308 EFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRA 367
DQ ++A ++ ++ KG+ +T N K +TS+ KEEYIHVRA
Sbjct: 192 GTDQVHSSNLPSDSANESVHSKDKGEESSPATTNGGKSKGKGA-KETSESQKEEYIHVRA 250
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RRGQATNSHSLAER+RREKISERMK LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF
Sbjct: 251 RRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 310
Query: 428 LSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGAL 487
LSMKLATVNPRLD NIE LL+KD+L+ PSS++GFSP+M ++P + SQ GL+HG
Sbjct: 311 LSMKLATVNPRLDLNIEGLLSKDLLRFPGVPSSSIGFSPEM--MHPQLQLSQPGLIHGGT 368
Query: 488 PGMGNPSDILRRTINSQL---------TPMTGGFKEPSQVSF 520
GM NP D+ RR I +QL + G F + SQ+++
Sbjct: 369 AGMANP-DVFRRIIQAQLGAKDGSQMPHSLNGSFSDVSQMAY 409
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/402 (43%), Positives = 219/402 (54%), Gaps = 79/402 (19%)
Query: 128 KGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRG 187
+G FL PG Q L FP DS FIERAAR + F G
Sbjct: 78 RGAGFLAPVPGFLQQGLGHFPVDSGFIERAARSTCF-----------------------G 114
Query: 188 RGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERKGES 247
GMM G A + GG + E
Sbjct: 115 GGMMAGGPYGAADQAMGDAFGGTA----------------------------------EG 140
Query: 248 LVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDI 307
L++ H + VG +D+AE G G DE + E GG+ S+KG SKKR+R + +
Sbjct: 141 LMDHH----RNVG-----NDKAEEFAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVM 191
Query: 308 EFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRA 367
DQ ++A ++ ++ KG+ +T N K +T + KEEYIHVRA
Sbjct: 192 GTDQVHSSNLPSDSANESVHSKDKGEESSPATTNGGKSKGKGA-KETYESQKEEYIHVRA 250
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RRGQATNSHSLAER+RREKISERMK LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF
Sbjct: 251 RRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 310
Query: 428 LSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGAL 487
LSMKLATVNPRLD NIE LL+KD+L+ PSS++GFSP+M ++P + SQ GL+HG
Sbjct: 311 LSMKLATVNPRLDLNIEGLLSKDLLRFPGVPSSSIGFSPEM--MHPQLQLSQPGLIHGGT 368
Query: 488 PGMGNPSDILRRTINSQL---------TPMTGGFKEPSQVSF 520
GM NP D+ RR I +QL + G F + SQ+++
Sbjct: 369 AGMANP-DVFRRIIQAQLGAKDGSQMPHSLNGSFSDVSQMAY 409
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 192/504 (38%), Positives = 251/504 (49%), Gaps = 158/504 (31%)
Query: 3 MSDKDKFVLEKRNDNPMDYHSPNMSSDWQFSGANLANAALNLVPTGNPLGVGSSSCSSAP 62
MSDKD+F +K++ L N ++L P NP+ +G S P
Sbjct: 1 MSDKDEFAAKKKD---------------------LVNTPVDLYPPENPM-LGPS-----P 33
Query: 63 MVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLR--SCIDRPLDIGW 120
M+DSF +T+W H+ + + S R + ID PL++GW
Sbjct: 34 MMDSFRETLW-----------------HDG----GFNVHTDADTSFRGNNNIDIPLEMGW 72
Query: 121 NPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMN----TFG 176
N ++QFPADS FIERAA+FS F G MMN + G
Sbjct: 73 N----------------------MAQFPADSGFIERAAKFSFFGCGEM--MMNQQQSSLG 108
Query: 177 TPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNG 236
P+ TGL+ + + G + L G ++
Sbjct: 109 VPDSTGLFLQDTQIPSGSK----------LDNGP----------------------LTDA 136
Query: 237 STLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLS 296
S L ER ++ S++++ SGG G D+ G+ S+KG S
Sbjct: 137 SKLVKERSINNV-----------------SEDSQSSGGNGHDDAKC-----GQTSSKGFS 174
Query: 297 SKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSD 356
SKKRKR G+D E ++ K ++K + P+S NK+ ++ Q SD
Sbjct: 175 SKKRKRIGKDCEEEEDK---------------KQKDEQSPTSNANKTNSEK-----QPSD 214
Query: 357 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 416
K+ YIH+RARRGQATNSHSLAERVRREKISERMKFLQDLVPGC KVTGKAVMLDEIIN
Sbjct: 215 SLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIIN 274
Query: 417 YVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPV- 475
YVQSLQ Q+EFLSMKL+ VNP LDFN+E LLAKD LQS A P+ F +M ++YPPV
Sbjct: 275 YVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSSA-PT----FPHNMSMLYPPVS 329
Query: 476 HQSQAGLMHGALPGMGNPSDILRR 499
+ SQ G M + M S L+R
Sbjct: 330 YLSQTGFMQPNISSMSLLSGGLKR 353
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 193/457 (42%), Positives = 250/457 (54%), Gaps = 59/457 (12%)
Query: 105 SASLRSCIDRPLDIG--WNPASSM---------IKGGIFLPNAPGMFPQSLSQFPADSAF 153
S L S +D L++G WNP +S KG + + P +L+QF +D F
Sbjct: 110 SGPLGSTMDTVLNMGTAWNPLNSSPNLNLAVDPSKGALSIQGPKHTPPHNLAQFSSDPGF 169
Query: 154 IERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQK 213
ERAARFS F N+ ++ F PE Y R ++ +SL G
Sbjct: 170 AERAARFSCFGNRNYPELATPFNFPEGEPSY---RSAPVDNSKIPRVQSNQSLKAGLP-I 225
Query: 214 NEMNVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSH-----GEAKQGVGASGGDSDE 268
N N+AE + + H S +RK + S + KQ + SG +SDE
Sbjct: 226 NLPNMAETKESNASETPHEGSEADPRFTDRKISRISRSSTPVSTDDMKQRLATSGNESDE 285
Query: 269 AEFSGGGGQDEPSAVEGTGG-EPSAKGLSS---KKRK-------------------RNGQ 305
AEFS G ++E S + G EP +K L+ +KR+ R +
Sbjct: 286 AEFSTG--REESSCSDQIAGREPGSKTLNEVNGRKRRVLSKAKAKDTPSAVASSGGRETK 343
Query: 306 DIEFDQAKGGQSSGEAAKDNTENQRKGDHKPS---STGNKSAGKQGKQGSQTSDPPKEEY 362
+E D++ + G N ++ K + S STG +S+ KQ K +T +PPK+ Y
Sbjct: 344 SLEADESPTKRYKGAEVGSNEKDDAKSKAEQSTILSTG-ESSPKQTKDIVKTPEPPKD-Y 401
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
IHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ
Sbjct: 402 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 461
Query: 423 RQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGL 482
RQVEFLSMKLATVNPRLDFN++ L+AKD+LQS G S + FS D +P +HQ Q G
Sbjct: 462 RQVEFLSMKLATVNPRLDFNMDGLIAKDMLQSH-GSSPRMLFSTDPTAAFPQLHQPQQGP 520
Query: 483 MH-GALPG-----MGNPSD-ILRRTINSQLTPMTGGF 512
+ G G MG+P + LRRT+N+Q P G+
Sbjct: 521 VQVGVTCGTEGHRMGHPVEGALRRTMNAQ-PPCIDGY 556
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/247 (57%), Positives = 179/247 (72%), Gaps = 15/247 (6%)
Query: 263 GGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAA 322
GGD E E +G GG PS+ E GG+ S+KG SKKR+R + + DQ + + ++A
Sbjct: 143 GGDKAEPELAGSGGV--PSS-EAAGGDCSSKGSDSKKRRRPSEVMGGDQVQSSNVAADSA 199
Query: 323 KDNTENQRKGDHKP----SSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSL 378
++ +++ KG+ ++TG +S GK K+GS+ KE+YIHVRARRGQATNSHSL
Sbjct: 200 NESVQSKDKGEESSPATGTTTGGRSKGKGAKEGSE-----KEDYIHVRARRGQATNSHSL 254
Query: 379 AERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR 438
AER+RREKISERMK LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR
Sbjct: 255 AERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR 314
Query: 439 LDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILR 498
LD NIE LL+KD+L+ SS++GFSP+M ++P + SQ GLM G M N SD+ R
Sbjct: 315 LDLNIEGLLSKDLLRFPGVSSSSMGFSPEM--MHPQLQLSQPGLMQGGAAAMAN-SDVFR 371
Query: 499 RTINSQL 505
R + +QL
Sbjct: 372 RIMQAQL 378
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 181/423 (42%), Positives = 235/423 (55%), Gaps = 68/423 (16%)
Query: 103 GSSASLRSCIDRPLDIG---WNPAS-SMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAA 158
GSSA+ + + P I WNP S +M+ G + GM SL F A+S F++ AA
Sbjct: 35 GSSANALTDMANPFPIPPGLWNPPSHNMVSGETSFSSLLGMLSASLPPFAANSGFVDSAA 94
Query: 159 RFSSFSGGNFCDMMN-TFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMN 217
F ++GGN M+N +F + +P G + NG++ S ++ ++E
Sbjct: 95 GFPCYNGGNLGAMINHSFPSTQPLGDFQ---------------NGIEPCSEIEAIESE-- 137
Query: 218 VAEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQ 277
G N S +++G++ E V +S + + E GG G+
Sbjct: 138 --------------GCKNVSLTGEKQQGDA------EMTHAVDSSSKELSKPECVGGAGR 177
Query: 278 DEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGG-QSSGEAAKDNTENQRKGDHKP 336
DE + V SKKRKR+ Q +GG Q + AA EN K + K
Sbjct: 178 DEGTRVS-----------CSKKRKRSIQHGGVKHVEGGEQLATMAAAQKNENDEKYEPKR 226
Query: 337 SSTG-NKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ 395
SS KS+ KQ K + + PKEEYIHVRARRGQATNSHSLAERVRREKISERMK+LQ
Sbjct: 227 SSVAPGKSSRKQAKDNAGS---PKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQ 283
Query: 396 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSR 455
DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA+VNP LD NIE +L+KD+ QSR
Sbjct: 284 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDLNIESILSKDIFQSR 343
Query: 456 AGPSS-TLGFSPDM--PLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGF 512
+S GF PD+ P ++PP + +Q G +P + SD R I++ L F
Sbjct: 344 GTTASLAFGFFPDIIPPRLHPPKY-TQIG-----IPSTMHSSDAFGRVIHAPLG-TNSAF 396
Query: 513 KEP 515
KEP
Sbjct: 397 KEP 399
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 140/249 (56%), Positives = 173/249 (69%), Gaps = 5/249 (2%)
Query: 263 GGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLS-SKKRKRNGQDIEFDQAKGGQSSGEA 321
G D E E G G D + E G+ S+KG S SKKR+R + + DQ + ++
Sbjct: 154 GNDKGEPEL-GRNGHDGVLSSEAAAGDCSSKGTSDSKKRRRPNEVMGGDQVQSANLPADS 212
Query: 322 AKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAER 381
A ++ ++ KG+ +T +GK +TS+ KE+YIHVRARRGQATNSHSLAER
Sbjct: 213 ANESVHSKDKGEESSPATTTGPGKSKGKGAKETSESQKEDYIHVRARRGQATNSHSLAER 272
Query: 382 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
+RREKISERMK LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD
Sbjct: 273 LRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL 332
Query: 442 NIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTI 501
NIE LL+KD+L+ PSS+LGFSP+M ++P + SQ GL+ G GM NP D+ RR +
Sbjct: 333 NIEGLLSKDLLRFPGVPSSSLGFSPEM--MHPQLQLSQPGLIQGGAAGMANP-DVFRRIM 389
Query: 502 NSQLTPMTG 510
+QL+ G
Sbjct: 390 QAQLSAKDG 398
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 22/35 (62%)
Query: 129 GGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSF 163
GG FL PG PQ L FP DS FIERAAR S F
Sbjct: 80 GGGFLAPVPGFLPQGLGHFPVDSGFIERAARASCF 114
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 140/250 (56%), Positives = 173/250 (69%), Gaps = 5/250 (2%)
Query: 263 GGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLS-SKKRKRNGQDIEFDQAKGGQSSGEA 321
G D E E G S+ G+ S+KG S SKKR+R + + DQ + ++
Sbjct: 149 GSDKGEPELGRNGHDGVLSSEAAAAGDCSSKGTSDSKKRRRPNEVMGGDQVQSSNLPADS 208
Query: 322 AKDNTENQRKGDHKPSSTGNKSAGK-QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAE 380
A ++ ++ KG+ +T GK +GK +TS+ KE+YIHVRARRGQATNSHSLAE
Sbjct: 209 ANESVHSKDKGEESSLATTTTGPGKSKGKGARETSESQKEDYIHVRARRGQATNSHSLAE 268
Query: 381 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 440
R+RREKISERMK LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD
Sbjct: 269 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 328
Query: 441 FNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRT 500
NIE LL+KD+L+ PSS+LGFSP+M ++P + SQ GL+ G GM NP D+ RR
Sbjct: 329 LNIEGLLSKDLLRFPGVPSSSLGFSPEM--MHPQLQLSQPGLIQGGAAGMANP-DVFRRI 385
Query: 501 INSQLTPMTG 510
+ +QL+ G
Sbjct: 386 MQAQLSAKDG 395
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 21/32 (65%)
Query: 132 FLPNAPGMFPQSLSQFPADSAFIERAARFSSF 163
FL PG PQ L+ FP DS FIERAAR S F
Sbjct: 77 FLAPVPGFLPQGLAHFPVDSGFIERAARASCF 108
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 140/242 (57%), Positives = 174/242 (71%), Gaps = 11/242 (4%)
Query: 266 SDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDN 325
SD+AE G Q PS+ E GG+ S+KG SKKR+R + + DQ + + ++A ++
Sbjct: 146 SDKAEPEIAGNQGVPSS-EAAGGDCSSKGSDSKKRRRPSEVMGADQVQSSNVAADSANES 204
Query: 326 TENQRKGDHK--PSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVR 383
++ KG+ ++T KS GK K+ S+ KE+YIHVRARRGQATNSHSLAER+R
Sbjct: 205 VHSKDKGEESSPATTTTGKSKGKGAKESSE-----KEDYIHVRARRGQATNSHSLAERLR 259
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI 443
REKISERMK LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD NI
Sbjct: 260 REKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNI 319
Query: 444 EELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINS 503
E LL+KD+L+ SS++GFSP+M ++P + SQ GLM G GM N D+ RR + +
Sbjct: 320 EGLLSKDLLRFPGVSSSSIGFSPEM--MHPQLQLSQPGLMQGGAAGMAN-QDVFRRIMQA 376
Query: 504 QL 505
QL
Sbjct: 377 QL 378
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 175/404 (43%), Positives = 220/404 (54%), Gaps = 66/404 (16%)
Query: 120 WNPAS-SMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTP 178
WNP S +M G + GM + F F++ AA F ++GGN M N F P
Sbjct: 59 WNPPSHNMGLGETSFSSLLGMLSAGVPPFATTPGFVDSAAGFPCYNGGNLGAMTN-FSFP 117
Query: 179 EPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGST 238
+ Q + N E ++ V G+ N S
Sbjct: 118 ----------------------------TTHQPLADFQNGVESCREIEAIVIEGSKNVSQ 149
Query: 239 LKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSK 298
+++G+ GE V +S + +GG G DE V SK
Sbjct: 150 TGEKQQGD------GETTHAVDSSSKELSMLGCNGGAGHDEEIRVS-----------CSK 192
Query: 299 KRKRNGQDIEFDQAKGGQ---SSGEAAKDNTENQRKGDHKPSSTGN-KSAGKQGKQGSQT 354
KRKR+GQD A+GG+ + G A K+ EN G+ K SS + KS+GKQ K + +
Sbjct: 193 KRKRSGQDGGVKHAEGGEQLATVGSAKKN--ENDDNGEPKRSSVASRKSSGKQTKDNAGS 250
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
PKE+YIHVRARRGQATNSHSLAERVRREKISERMK+LQDLVPGCSKVTGKAVMLDEI
Sbjct: 251 ---PKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEI 307
Query: 415 INYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSR-AGPSSTLGFSPDM--PLV 471
INYVQSLQRQVEFLSMKLA+VNP LDFNIE +L+KD+ QSR SS GF PD+ P +
Sbjct: 308 INYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQSRGTTASSAFGFFPDIVHPRL 367
Query: 472 YPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEP 515
+PP + +Q G +P + NP+D R ++ L FKEP
Sbjct: 368 HPPKY-TQVG-----MPSIVNPTDAFGRATHAPLG-TNSSFKEP 404
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 199/527 (37%), Positives = 256/527 (48%), Gaps = 130/527 (24%)
Query: 1 MDMSDKDKFVLEK-----RNDNPMDYHSPNMSSDWQFSGANLANAALNLVPTGNPLGVGS 55
M+M++K+ LEK N +P +H P S++ Q + A AA+ GNP G
Sbjct: 1 MEMNEKNDADLEKDQPSGHNQHP-SFHGPGFSTEAQIDSSTNALAAM-----GNPFPPG- 53
Query: 56 SSCSSAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSCIDRP 115
+W+ P + L N +A
Sbjct: 54 ---------------LWNPPGQNFGLSETNTNAM-------------------------- 72
Query: 116 LDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNT- 174
I +P SS + GM ++ + S F++ F S +GGN MM+
Sbjct: 73 --ITGHPFSSFL----------GMLSAAVPTYAGPSGFMDCGTGFPSLNGGNLGPMMDHP 120
Query: 175 FGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGAS 234
F +P G + G E S++ ++V+ G
Sbjct: 121 FPRNQPLGSFQNG-------------------------------TEPSREIEMTVDEGCK 149
Query: 235 NGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKG 294
+G +L +R+ SHG V AS S SGG QDE +V
Sbjct: 150 DGVSLAADRQQGDTEGSHG-----VDASKEFSKPG-CSGGVCQDEGPSVS---------- 193
Query: 295 LSSKKRKRNGQD--IEFDQAKGGQSSGEAAKDNTENQRK-GDHKPSSTGNKSAGKQGKQG 351
S+KKRKR+GQD ++ Q Q + AK +N K G +P S KS GKQ +
Sbjct: 194 -SAKKRKRSGQDRGVKHVQEGSQQLATVVAKQEKDNDEKDGPKRPISASRKSNGKQTED- 251
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
SD PKE+YIH+RAR GQATNSHSLAERVRREKISERMKFLQDLVPGCSKV GKAVML
Sbjct: 252 --NSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVML 309
Query: 412 DEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGP-SSTLGFSPD--M 468
DEIINYVQSLQRQVEFLSMKL+TVNP LDFNIE +L+KD QS+ P SS GF P+
Sbjct: 310 DEIINYVQSLQRQVEFLSMKLSTVNPALDFNIERILSKDFFQSQGTPASSAFGFLPENSH 369
Query: 469 PLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEP 515
++ P H SQA AL G+ NP+D R N+Q+ + FKEP
Sbjct: 370 HFLHQPKH-SQA-----ALHGIVNPTDAFGRVTNAQVG-SSSSFKEP 409
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 184/435 (42%), Positives = 233/435 (53%), Gaps = 84/435 (19%)
Query: 100 IRKGSSASLRSCIDRPLDIG---WNPAS-SMIKGGIFLPNAPGMFPQSLSQ-FPADSAFI 154
I ++A+ + + P I WNP S +M G + GM S F A F+
Sbjct: 36 IASSATANALTTMANPFPIPPGLWNPPSHNMGLGETSFSSLLGMLSASAPPPFAATPGFV 95
Query: 155 ERAARFSSFSGGNFCDMMN-TF-GTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQ 212
+ AA F ++GGNF M+N +F GT P+G + NG++ ++
Sbjct: 96 DSAAGFPCYNGGNFGAMVNHSFPGTHLPSGDFQ---------------NGVEPCREIEAI 140
Query: 213 KNEMNVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEA--E 270
+NE G V GE +QG G + D D + E
Sbjct: 141 ENE-----------------------------GSKNVTQTGEKQQGDGETTCDVDSSSKE 171
Query: 271 FS-----GGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQ---SSGEAA 322
S GG G DE + V SKKRKR+GQD A+G + + G A
Sbjct: 172 LSMPGRNGGAGHDEGTRVS-----------CSKKRKRSGQDDGVKHAEGDEQLATVGSAQ 220
Query: 323 KDNTENQRKGDHKPSSTGN-KSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAER 381
K+ EN KG K SS + KS+GKQ K + + PKEEYIHVRARRGQATNSHSLAER
Sbjct: 221 KN--ENDEKGKPKRSSVASGKSSGKQTKDNAGS---PKEEYIHVRARRGQATNSHSLAER 275
Query: 382 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
VRREKISERMK+LQ+LVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLA+VNP LDF
Sbjct: 276 VRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDF 335
Query: 442 NIEELLAKDVLQSR-AGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRT 500
NIE +L+KD+ QSR + SS GF PD +V+P +H + +P + N +D R
Sbjct: 336 NIERILSKDIFQSRGSAASSAFGFLPD--IVHPRLHPPK--YTQVVMPSIVNSTDAFGRV 391
Query: 501 INSQLTPMTGGFKEP 515
+ L FKEP
Sbjct: 392 ARAPLG-TNSAFKEP 405
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 195/517 (37%), Positives = 251/517 (48%), Gaps = 129/517 (24%)
Query: 1 MDMSDKDKFVLEK-----RNDNPMDYHSPNMSSDWQFSGANLANAALNLVPTGNPLGVGS 55
M+M++K+ LEK N +P +H P S++ Q + A AA+ GNP G
Sbjct: 1 MEMNEKNDADLEKDQPSGHNQHP-SFHGPGFSTEAQIDSSTNALAAM-----GNPFPPG- 53
Query: 56 SSCSSAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHNASSSNALGIRKGSSASLRSCIDRP 115
+W+ P + L N +A
Sbjct: 54 ---------------LWNPPGQNFGLSETNTNAM-------------------------- 72
Query: 116 LDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNT- 174
I +P SS + GM ++ + S F++ F S +GGN MM+
Sbjct: 73 --ITGHPFSSFL----------GMLSAAVPTYAGPSGFMDCGTGFPSLNGGNLGPMMDHP 120
Query: 175 FGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGAS 234
F +P G + G E S++ ++V+ G
Sbjct: 121 FPRNQPLGSFQNG-------------------------------TEPSREIEMTVDEGCK 149
Query: 235 NGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKG 294
+G +L +R+ SHG V AS S SGG QDE +V
Sbjct: 150 DGVSLAADRQQGDTEGSHG-----VDASKEFSKPG-CSGGVCQDEGPSVS---------- 193
Query: 295 LSSKKRKRNGQD--IEFDQAKGGQSSGEAAKDNTENQRK-GDHKPSSTGNKSAGKQGKQG 351
S+KKRKR+GQD ++ Q Q + AK +N K G +P S KS GKQ +
Sbjct: 194 -SAKKRKRSGQDRGVKHVQEGSQQLATVVAKQEKDNDEKDGPKRPISASRKSNGKQTED- 251
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
SD PKE+YIH+RAR GQATNSHSLAERVRREKISERMKFLQDLVPGCSKV GKAVML
Sbjct: 252 --NSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVML 309
Query: 412 DEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGP-SSTLGFSPD--M 468
DEIINYVQSLQRQVEFLSMKL+TVNP LDFNIE +L+KD QS+ P SS GF P+
Sbjct: 310 DEIINYVQSLQRQVEFLSMKLSTVNPALDFNIERILSKDFFQSQGTPASSAFGFLPENSH 369
Query: 469 PLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQL 505
++ P H SQA AL G+ NP+D R N+Q+
Sbjct: 370 HFLHQPKH-SQA-----ALHGIVNPTDAFGRVTNAQM 400
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 176/409 (43%), Positives = 225/409 (55%), Gaps = 71/409 (17%)
Query: 120 WNPAS-SMIKGGIFLPNAPGMFPQ-SLSQFPADSAFIERAARFSSFSGGNFCDMMNT-F- 175
WNP S +M G + GM + F A F++ A F ++GGN M+N F
Sbjct: 60 WNPPSHNMGLGETSFSSLLGMLSAGAPPPFVATPGFVDSTAGFPCYNGGNLGAMINHPFP 119
Query: 176 GTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASN 235
G +P G + G V + + +E G+ N
Sbjct: 120 GIHQPLGDFQNG------------------------------VEPCREIEDIEIE-GSKN 148
Query: 236 GSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGL 295
S +++G+ GE V +S + +GG G DE + V
Sbjct: 149 VSQTGEKQQGD------GETTHAVDSSSKELSMPGRNGGAGHDEGTRVS----------- 191
Query: 296 SSKKRKRNGQDIEFDQAKGGQ---SSGEAAKDNTENQRKGDHKPSSTGN-KSAGKQGKQG 351
SKKRKR+GQD A+GG+ + G A K+ E+ KG+ K SS + KS+GKQ K
Sbjct: 192 CSKKRKRSGQDGGVKHAEGGEQLATVGSAQKN--EDDEKGEPKRSSVASGKSSGKQIKDN 249
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
+ + PKE+YIHVRARRGQATNSHSLAERVRREKISERMK+LQDLVPGCSKVTGKAVML
Sbjct: 250 AGS---PKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVML 306
Query: 412 DEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSR-AGPSSTLGFSPDM-- 468
DEIINYVQSLQRQVEFLSMKLA+VNP LDFNIE +L+KD+ Q R SS GF PD+
Sbjct: 307 DEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVH 366
Query: 469 PLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPSQ 517
P ++PP + +Q G +P + NP+D R I++ L FKEP
Sbjct: 367 PRLHPPKY-TQVG-----MPSIVNPTDAFGRVIHAPLG-TNSAFKEPKH 408
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 176/409 (43%), Positives = 225/409 (55%), Gaps = 71/409 (17%)
Query: 120 WNPAS-SMIKGGIFLPNAPGMFPQ-SLSQFPADSAFIERAARFSSFSGGNFCDMMNT-F- 175
WNP S +M G + GM + F A F++ A F ++GGN M+N F
Sbjct: 168 WNPPSHNMGLGETSFSSLLGMLSAGAPPPFVATPGFVDSTAGFPCYNGGNLGAMINHPFP 227
Query: 176 GTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASN 235
G +P G + G V + + +E G+ N
Sbjct: 228 GIHQPLGDFQNG------------------------------VEPCREIEDIEIE-GSKN 256
Query: 236 GSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGL 295
S +++G+ GE V +S + +GG G DE + V
Sbjct: 257 VSQTGEKQQGD------GETTHAVDSSSKELSMPGRNGGAGHDEGTRVS----------- 299
Query: 296 SSKKRKRNGQDIEFDQAKGGQ---SSGEAAKDNTENQRKGDHKPSSTGN-KSAGKQGKQG 351
SKKRKR+GQD A+GG+ + G A K+ E+ KG+ K SS + KS+GKQ K
Sbjct: 300 CSKKRKRSGQDGGVKHAEGGEQLATVGSAQKN--EDDEKGEPKRSSVASGKSSGKQIKDN 357
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
+ + PKE+YIHVRARRGQATNSHSLAERVRREKISERMK+LQDLVPGCSKVTGKAVML
Sbjct: 358 AGS---PKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVML 414
Query: 412 DEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSR-AGPSSTLGFSPDM-- 468
DEIINYVQSLQRQVEFLSMKLA+VNP LDFNIE +L+KD+ Q R SS GF PD+
Sbjct: 415 DEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVH 474
Query: 469 PLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPSQ 517
P ++PP + +Q G +P + NP+D R I++ L FKEP
Sbjct: 475 PRLHPPKY-TQVG-----MPSIVNPTDAFGRVIHAPLG-TNSAFKEPKH 516
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 175/411 (42%), Positives = 222/411 (54%), Gaps = 67/411 (16%)
Query: 103 GSSASLRSCIDRPLDIG---WNP-ASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAA 158
SSA+ + + P I WNP A S+ G + GM + A S F++ A
Sbjct: 35 ASSANALTTMANPFPIHPGLWNPPAQSLGLGETSFSSLLGMLSAGVPPSAATSGFLDSAT 94
Query: 159 RFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNV 218
FSS++GGN M+N P L G G+ E A G K++S Q+ + +
Sbjct: 95 GFSSYNGGNLGAMIN-HSFPSIQHLGDLGNGV---EIEAIASEGCKNVS--QTSEKQQGD 148
Query: 219 AEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQD 278
AE++ D V + + + E +GG D
Sbjct: 149 AEMTHD----------------------------------VDSPSKELSKPECTGGTVHD 174
Query: 279 EPSAVEGTGGEPSAKGLSSKKRKRNGQD--IEFDQAKGGQSSGEAAKDNTENQRKGDHKP 336
E + V SKKRKR+GQ + D GE + N EN K + K
Sbjct: 175 EGTRVS-----------CSKKRKRSGQYELLLKDHGVKHVEGGEEPQKN-ENDEKDEPKR 222
Query: 337 SSTGN-KSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ 395
SS + KS+GKQ K + + PKEEYIHVRARRGQATNSHSLAERVRREKISERMK+LQ
Sbjct: 223 SSVASGKSSGKQAKDNAGS---PKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQ 279
Query: 396 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSR 455
DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA+VNP LDFNI+ +L+KD+ QS+
Sbjct: 280 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIDRILSKDIFQSQ 339
Query: 456 -AGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQL 505
A SS GF P +VYP +HQ + M +P + N +D RR ++ L
Sbjct: 340 GAIASSVFGFLPG--IVYPQLHQPK--YMQVKMPSIVNSTDAFRRVTHAPL 386
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 176/409 (43%), Positives = 225/409 (55%), Gaps = 71/409 (17%)
Query: 120 WNPAS-SMIKGGIFLPNAPGMFPQ-SLSQFPADSAFIERAARFSSFSGGNFCDMMNT-F- 175
WNP S +M G + GM + F A F++ A F ++GGN M+N F
Sbjct: 117 WNPPSHNMGLGETSFSSLLGMLSAGAPPPFVATPGFVDSTAGFPCYNGGNLGAMINHPFP 176
Query: 176 GTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASN 235
G +P G + G V + + +E G+ N
Sbjct: 177 GIHQPLGDFQNG------------------------------VEPCREIEDIEIE-GSKN 205
Query: 236 GSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGL 295
S +++G+ GE V +S + +GG G DE + V
Sbjct: 206 VSQTGEKQQGD------GETTHAVDSSSKELSMPGRNGGAGHDEGTRVS----------- 248
Query: 296 SSKKRKRNGQDIEFDQAKGGQ---SSGEAAKDNTENQRKGDHKPSSTGN-KSAGKQGKQG 351
SKKRKR+GQD A+GG+ + G A K+ E+ KG+ K SS + KS+GKQ K
Sbjct: 249 CSKKRKRSGQDGGVKHAEGGEQLATVGSAQKN--EDDEKGEPKRSSVASGKSSGKQIKDN 306
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
+ + PKE+YIHVRARRGQATNSHSLAERVRREKISERMK+LQDLVPGCSKVTGKAVML
Sbjct: 307 AGS---PKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVML 363
Query: 412 DEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSR-AGPSSTLGFSPDM-- 468
DEIINYVQSLQRQVEFLSMKLA+VNP LDFNIE +L+KD+ Q R SS GF PD+
Sbjct: 364 DEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVH 423
Query: 469 PLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPSQ 517
P ++PP + +Q G +P + NP+D R I++ L FKEP
Sbjct: 424 PRLHPPKY-TQVG-----MPSIVNPTDAFGRVIHAPLG-TNSAFKEPKH 465
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 175/409 (42%), Positives = 225/409 (55%), Gaps = 71/409 (17%)
Query: 120 WNPAS-SMIKGGIFLPNAPGMFPQ-SLSQFPADSAFIERAARFSSFSGGNFCDMMNT-F- 175
WNP S +M G + GM + F A F++ A F ++GGN M+N F
Sbjct: 60 WNPPSHNMGLGETSFSSLLGMLSAGAPPPFVATPGFVDSTAGFPCYNGGNLGAMINHPFP 119
Query: 176 GTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASN 235
G +P G + G V + + +E G+ N
Sbjct: 120 GIHQPLGDFQNG------------------------------VEPCREIEDIEIE-GSKN 148
Query: 236 GSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGL 295
S +++G+ GE V +S + +GG G DE + V
Sbjct: 149 VSQTGEKQQGD------GETTHAVDSSSKELSMPGRNGGAGHDEGTRVS----------- 191
Query: 296 SSKKRKRNGQDIEFDQAKGGQ---SSGEAAKDNTENQRKGDHKPSSTGN-KSAGKQGKQG 351
SKKRKR+GQD A+GG+ + G A K+ E+ KG+ + SS + KS+GKQ K
Sbjct: 192 CSKKRKRSGQDGGVKHAEGGEQLATVGSAQKN--EDDEKGEPERSSVASGKSSGKQIKDN 249
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
+ + PKE+YIHVRARRGQATNSHSLAERVRREKISERMK+LQDLVPGCSKVTGKAVML
Sbjct: 250 AGS---PKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVML 306
Query: 412 DEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSR-AGPSSTLGFSPDM-- 468
DEIINYVQSLQRQVEFLSMKLA+VNP LDFNIE +L+KD+ Q R SS GF PD+
Sbjct: 307 DEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVH 366
Query: 469 PLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPSQ 517
P ++PP + +Q G +P + NP+D R I++ L FKEP
Sbjct: 367 PRLHPPKY-TQVG-----MPSIVNPTDAFGRVIHAPLG-TNSAFKEPKH 408
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 186/305 (60%), Gaps = 45/305 (14%)
Query: 215 EMNVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGG 274
EMNV E KDA L+ ++++G++ E+ GV AS + + E SGG
Sbjct: 143 EMNVDEGCKDALLT-----------GDKQQGDT------ESSHGVDASSKELSKPECSGG 185
Query: 275 GGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGG--QSSGEAAKDNTENQRKG 332
GQDE +V KKRKR QD + G Q + AAK ++ K
Sbjct: 186 AGQDEGPSVS-----------CPKKRKRPSQDRGVKNVQEGSQQLATLAAKQEKDDGDKD 234
Query: 333 DHK-PSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERM 391
+ K P T KS GKQ SD PKE+YIH+RAR GQATNSHSLAERVRREKISERM
Sbjct: 235 EPKRPIVTSRKS---NGKQTEDKSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERM 291
Query: 392 KFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
KFLQDLVPGCSKV GKAVMLDEIINYVQSLQRQVEFLSMKL+ VNP LDFNIE +L+KD+
Sbjct: 292 KFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSAVNPALDFNIERILSKDL 351
Query: 452 LQSRAGPSSTLGFSPDM--PLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMT 509
QS+ SST GF PD+ ++PP H SQA AL + NP+D R N+ P+
Sbjct: 352 FQSQGTASSTFGFLPDIGHQFLHPPKH-SQA-----ALHSIVNPADAFGRVTNA---PVG 402
Query: 510 GGFKE 514
FKE
Sbjct: 403 CTFKE 407
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/196 (63%), Positives = 143/196 (72%), Gaps = 5/196 (2%)
Query: 298 KKRKRNGQDIEFDQAKGGQ-SSGEAAKDNT-ENQRKGDHKPSSTGNKSAGKQGKQGSQTS 355
KKRKR QD+E Q +G S E +N + ++KG S+ N A G ++
Sbjct: 9 KKRKRINQDMELGQIQGASPMSIETTNENVLDTKQKGGQDSSTMAN--AKPSGTNAKNST 66
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
D KE+YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII
Sbjct: 67 DGAKEDYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 126
Query: 416 NYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPV 475
NYVQSLQRQVEFLSMKLA VNP LDFNIE LL+KD+LQ R G SS +GFSP +++P +
Sbjct: 127 NYVQSLQRQVEFLSMKLAAVNPTLDFNIEGLLSKDLLQLRGGSSSAIGFSPQR-ILHPQL 185
Query: 476 HQSQAGLMHGALPGMG 491
H SQ GL+ + M
Sbjct: 186 HPSQQGLIQAGISSMA 201
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/271 (52%), Positives = 178/271 (65%), Gaps = 20/271 (7%)
Query: 246 ESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLS-SKKRKRNG 304
E+L+ H + K VG G E E G P A GG+ S+KG S SKKR+R
Sbjct: 129 EALLLDH-QKKDVVGEKG----EPELGRDDGVLSPEA--AGGGDCSSKGTSDSKKRRRPN 181
Query: 305 QDIEFDQAKGGQ-SSGEAAKDNTENQRKGDHKPSSTGNKSAG---KQGKQGSQTSDPPKE 360
+ + DQ + S ++A ++ + KG+ +T AG +GK + + KE
Sbjct: 182 EVVGSDQVQSANLPSADSANESVHSMDKGEESSPATTTAGAGPGKSRGKGEKEVPESQKE 241
Query: 361 EYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQS 420
+YIH+RARRGQATNSHSLAER+RREKISERMK LQDLVPGCSKVTGKAVMLDEIINYVQS
Sbjct: 242 DYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQS 301
Query: 421 LQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQ-SQ 479
LQRQVEFLSMKLATVNPRLD NIE LL+KD+L+ PSS+LGF P+M ++P + Q SQ
Sbjct: 302 LQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGAPSSSLGFPPEM--MHPQLLQLSQ 359
Query: 480 AGLM----HGALPGMGNPSDILRRTINSQLT 506
G + A GM NP D+ RR + +QL+
Sbjct: 360 PGRLVQGAAAAAAGMANP-DVFRRIMQAQLS 389
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 25/42 (59%)
Query: 123 ASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFS 164
A S +GG FL PG PQ L F DS FIERAAR S FS
Sbjct: 58 AMSAARGGGFLAPVPGFLPQGLGHFAVDSGFIERAARTSCFS 99
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/235 (54%), Positives = 158/235 (67%), Gaps = 31/235 (13%)
Query: 266 SDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDN 325
S++++ SGG G D+ G+ S+KG SSKKRKR G+D E ++ K
Sbjct: 98 SEDSQSSGGNGHDDAKC-----GQTSSKGFSSKKRKRIGKDCEEEEDK------------ 140
Query: 326 TENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRRE 385
++K + P+S NK+ ++ Q SD K+ YIH+RARRGQATNSHSLAERVRRE
Sbjct: 141 ---KQKDEQSPTSNANKTNSEK-----QPSDSLKDGYIHMRARRGQATNSHSLAERVRRE 192
Query: 386 KISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEE 445
KISERMKFLQDLVPGC KVTGKAVMLDEIINYVQSLQ Q+EFLSMKL+ VNP LDFN+E
Sbjct: 193 KISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLES 252
Query: 446 LLAKDVLQSRAGPSSTLGFSPDMPLVYPPV-HQSQAGLMHGALPGMGNPSDILRR 499
LLAKD LQS A P+ F +M ++YPPV + SQ G M + M S L+R
Sbjct: 253 LLAKDALQSSA-PT----FPHNMSMLYPPVSYLSQTGFMQPNISSMSLLSGGLKR 302
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 143/271 (52%), Positives = 178/271 (65%), Gaps = 20/271 (7%)
Query: 246 ESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLS-SKKRKRNG 304
E+L+ H + K VG G E E G P A GG+ S+KG S SKKR+R
Sbjct: 139 EALLLDH-QKKDVVGEKG----EPELGRDDGVLSPEAA--GGGDCSSKGTSDSKKRRRPN 191
Query: 305 QDIEFDQAKGGQ-SSGEAAKDNTENQRKGDHKPSSTGNKSAG---KQGKQGSQTSDPPKE 360
+ + DQ + S ++A ++ + KG+ +T AG +GK + + KE
Sbjct: 192 EVVGSDQVQSANLPSADSANESVHSMDKGEESSPATTTAGAGPGKSRGKGEKEVPESQKE 251
Query: 361 EYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQS 420
+YIH+RARRGQATNSHSLAER+RREKISERMK LQDLVPGCSKVTGKAVMLDEIINYVQS
Sbjct: 252 DYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQS 311
Query: 421 LQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQ-SQ 479
LQRQVEFLSMKLATVNPRLD NIE LL+KD+L+ PSS+LGF P+M ++P + Q SQ
Sbjct: 312 LQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGAPSSSLGFPPEM--MHPQLLQLSQ 369
Query: 480 AGLM----HGALPGMGNPSDILRRTINSQLT 506
G + A GM NP D+ RR + +QL+
Sbjct: 370 PGRLVQGAAAAAAGMANP-DVFRRIMQAQLS 399
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 25/42 (59%)
Query: 123 ASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFS 164
A S +GG FL PG PQ L F DS FIERAAR S FS
Sbjct: 68 AMSAARGGGFLAPVPGFLPQGLGHFAVDSGFIERAARTSCFS 109
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 135/253 (53%), Positives = 169/253 (66%), Gaps = 16/253 (6%)
Query: 264 GDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLS-SKKRKRNGQDIEFDQAKGGQSSGEAA 322
G+ E E G P A GG+ S+KG S SKKR+R + + DQ + ++A
Sbjct: 154 GEKGEPELGRDDGVLSPEAA--GGGDCSSKGTSDSKKRRRPNEVVGGDQVQSANLPADSA 211
Query: 323 KDNTENQRKGDHKPSSTGNKSAG---KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLA 379
++ + KG+ +T AG +GK + + KE+YIH+RARRGQATNSHSLA
Sbjct: 212 NESVHSMDKGEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLA 271
Query: 380 ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
ER+RREKISERMK LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL
Sbjct: 272 ERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 331
Query: 440 DFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPP--VHQSQAGLM----HGALPGMGNP 493
D NIE LL+KD+L+ PSS+LGF P+M ++PP + SQ G + A GM +P
Sbjct: 332 D-NIEGLLSKDLLRFPGAPSSSLGFPPEM--MHPPQLLQLSQPGRLVQGAAAAGGGMASP 388
Query: 494 SDILRRTINSQLT 506
D+ RR + +QL+
Sbjct: 389 -DVFRRIMQAQLS 400
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 24/42 (57%)
Query: 123 ASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFS 164
A S +GG F PG PQ L F DS FIERAAR S FS
Sbjct: 68 AMSAARGGGFFAPVPGFLPQGLGHFAVDSGFIERAARTSCFS 109
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 172/407 (42%), Positives = 213/407 (52%), Gaps = 41/407 (10%)
Query: 133 LPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQ 192
LP P SL+ FPAD F ERAARFS F GNF + FG + Y G +
Sbjct: 152 LPTHP-----SLAPFPADPGFAERAARFSCFGTGNFSGLSAQFGLNDTELPYRSSTGKLS 206
Query: 193 GPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKD---ASLSVEHGASNGSTLKNERKGESLV 249
V + K+ +G Q E +D AS S ST N G+S
Sbjct: 207 ---RVSSNQSFKA-AGSQLGAQEFKDRSPPQDGVSASDKKLGKISRSSTPDNAELGDS-- 260
Query: 250 NSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGE----PSAKG--LSSKKRKRN 303
E+ GG++ + G+ S G E PSAK ++S K + N
Sbjct: 261 --REESSVSEQIPGGETSLKGQNDANGRKRKSIPRGKAKEVPSSPSAKDAKVASDKDESN 318
Query: 304 GQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYI 363
+ + D+ G + AK G K + GN+ KQ K + + PK+ YI
Sbjct: 319 AKRSKPDEGSGSEKDAAKAKAEA----NGSTKSAGDGNQ---KQSKDNPKPPEAPKD-YI 370
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
HVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEIINYVQSLQR
Sbjct: 371 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 430
Query: 424 QVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAG-- 481
QVEFLSMKLATVNPR+DFN+E LL+K++ QSR + L +P +Q Q G
Sbjct: 431 QVEFLSMKLATVNPRMDFNMEALLSKEIFQSRGSLPQAMYPLDSSALAFPYGYQPQQGPS 490
Query: 482 LMHGALPGMGNPSDI------LRRTINSQLTPMTGGFKE-PSQVSFY 521
L +G G P + +RRT S + P GF E SQVS +
Sbjct: 491 LQNGIPNGTETPFSVNPLNSAIRRT--SSMLPSIDGFGEAASQVSTF 535
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 172/407 (42%), Positives = 213/407 (52%), Gaps = 41/407 (10%)
Query: 133 LPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQ 192
LP P SL+ FPAD F ERAARFS F GNF + FG + Y G +
Sbjct: 152 LPTHP-----SLAPFPADPGFAERAARFSCFGTGNFSGLSAQFGLNDTELPYRSSTGKLS 206
Query: 193 GPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKD---ASLSVEHGASNGSTLKNERKGESLV 249
V + K+ +G Q E +D AS S ST N G+S
Sbjct: 207 ---RVSSNQSFKA-AGSQLGAQEFKDRSPPQDGVSASDKKLGKISRSSTPDNTELGDS-- 260
Query: 250 NSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGE----PSAKG--LSSKKRKRN 303
E+ GG++ + G+ S G E PSAK ++S K + N
Sbjct: 261 --REESSVSEQIPGGETSLKGQNDANGRKRKSIPRGKAKEVPSSPSAKDAKVASDKDESN 318
Query: 304 GQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYI 363
+ + D+ G + AK G K + GN+ KQ K + + PK+ YI
Sbjct: 319 AKRSKPDEGSGSEKDAAKAKAEA----NGSTKSAGDGNQ---KQSKDNPKPPEAPKD-YI 370
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
HVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEIINYVQSLQR
Sbjct: 371 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 430
Query: 424 QVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAG-- 481
QVEFLSMKLATVNPR+DFN+E LL+K++ QSR + L +P +Q Q G
Sbjct: 431 QVEFLSMKLATVNPRMDFNMEALLSKEIFQSRGSLPQAMYPLDSSALAFPYGYQPQQGPS 490
Query: 482 LMHGALPGMGNPSDI------LRRTINSQLTPMTGGFKE-PSQVSFY 521
L +G G P + +RRT S + P GF E SQVS +
Sbjct: 491 LQNGIPNGTETPFSVNPLNSAIRRT--SSMLPSIDGFGEAASQVSTF 535
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 164/411 (39%), Positives = 211/411 (51%), Gaps = 44/411 (10%)
Query: 111 CIDRPLD----IGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSF-SG 165
C PL+ + + S I+G N+ + SL+ PAD F+ERAARFS F S
Sbjct: 119 CYTTPLNSPPKLNISILDSQIRGNTNTNNSHNLPIASLAPLPADPGFVERAARFSCFGSS 178
Query: 166 GNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDA 225
N + FG+ E + L R G Q V A N ++++ G+ + D
Sbjct: 179 RNLSGLSGQFGSNESSFL---SRIPATGSQ-VNASNVQQAVADGKP----------NSDR 224
Query: 226 SLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEG 285
L+V S ST +N G+ S E+ GG E S + +V
Sbjct: 225 KLNV---ISRSSTPENAEFGD----SREESSLSEQIPGG-----ELSIKVQNNNDFSVRK 272
Query: 286 TGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAG 345
P K + + D++ K ++ + D K K GN+
Sbjct: 273 RKAIPRGKAKETPSSSPSASDVKVAAEKDESTAKRSKSDEANGHDKA--KAEQNGNQ--- 327
Query: 346 KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 405
KQ K ++ +PPK +YIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGC+KVT
Sbjct: 328 KQNKDNTKLPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 386
Query: 406 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAG-PSSTLGF 464
GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+D N+E L+KDV QS P S
Sbjct: 387 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDVNMEA-LSKDVFQSFGSLPHSLYPL 445
Query: 465 SPDMPLVYPPVHQSQAGL-----MHGALPGMGNPSDILRRTINSQLTPMTG 510
L P +QSQ G+ M + + +LRR + QL P+ G
Sbjct: 446 DSSAALALPYSYQSQQGVPLPNDMSSNAETQFSMNALLRRNHSMQLPPLDG 496
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 206/400 (51%), Gaps = 78/400 (19%)
Query: 133 LPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQ 192
LP P SL+ FPAD F ERAARFS F GNF + FG + Y G
Sbjct: 94 LPTHP-----SLAPFPADPGFAERAARFSCFGTGNFSGLSAQFGLNDTELPYRSSTGWKL 148
Query: 193 GPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSH 252
G + E +V+E S++ G N RK +S+
Sbjct: 149 G-----------------DSREESSVSEQIPGGETSLK-----GQNDANGRKRKSI--PR 184
Query: 253 GEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKG--LSSKKRKRNGQDIEFD 310
G+AK + PS+ PSAK ++S K + N + + D
Sbjct: 185 GKAK---------------------EVPSS-------PSAKDAKVASDKDESNAKRSKPD 216
Query: 311 QAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRG 370
+ G + AK G K + GN+ KQ K + + PK +YIHVRARRG
Sbjct: 217 EGSGSEKDAAKAKAEA----NGSTKSAGDGNQ---KQSKDNPKPPEAPK-DYIHVRARRG 268
Query: 371 QATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
QAT+SHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSM
Sbjct: 269 QATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 328
Query: 431 KLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAG--LMHGALP 488
KLATVNPR+DFN+E LL+K++ QSR + L +P +Q Q G L +G
Sbjct: 329 KLATVNPRMDFNMEALLSKEIFQSRGSLPQAMYPLDSSALAFPYGYQPQQGPSLQNGIPN 388
Query: 489 GMGNPSDI------LRRTINSQLTPMTGGFKE-PSQVSFY 521
G P + +RRT S + P GF E SQVS +
Sbjct: 389 GTETPFSVNPLNSAIRRT--SSMLPSIDGFGEAASQVSTF 426
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 148/219 (67%), Gaps = 31/219 (14%)
Query: 266 SDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDN 325
S++++ SG G D+ G S+KG +SKKRKR G+D E GE K
Sbjct: 94 SEDSQSSGCNGHDDAKC-----GVTSSKGFNSKKRKRIGKDCE----------GEEDK-- 136
Query: 326 TENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRRE 385
+K + +S NK+ ++ Q SD K+ YIH+RARRGQATNSHSLAERVRRE
Sbjct: 137 ---MQKDEQSSNSNVNKTNSEK-----QASDSLKDGYIHMRARRGQATNSHSLAERVRRE 188
Query: 386 KISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEE 445
KISERMKFLQDLVPGC KVTGKAVMLDEIINYVQSLQ Q+EFLSMKL+ VNP LDFN+E
Sbjct: 189 KISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLES 248
Query: 446 LLAKDVLQSRAGPSSTLGFSPDMPLVYPPV-HQSQAGLM 483
LLAKD LQS A P+ F +M ++YPP+ + SQ G M
Sbjct: 249 LLAKDALQSSA-PT----FPQNMSMLYPPLSYLSQTGFM 282
>gi|224101643|ref|XP_002312365.1| predicted protein [Populus trichocarpa]
gi|222852185|gb|EEE89732.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/128 (79%), Positives = 110/128 (85%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD NIE LLAKD
Sbjct: 1 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLAKD 60
Query: 451 VLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTG 510
+LQ A P S+L FS +MP+ YPP H SQAGL+ A PGM N SDI+ RTINSQLTPMT
Sbjct: 61 ILQLHAVPPSSLAFSLEMPMAYPPSHPSQAGLIPTAFPGMNNHSDIICRTINSQLTPMTA 120
Query: 511 GFKEPSQV 518
GFKEP+Q+
Sbjct: 121 GFKEPAQL 128
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 171/439 (38%), Positives = 226/439 (51%), Gaps = 74/439 (16%)
Query: 110 SCIDRPLDI--GWNPASSM---IKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFS 164
SC + PL+ N +S M I+G + +P+ Q+L+ F D F ERAARFS F
Sbjct: 109 SCYNTPLNSPPKLNLSSIMESQIRGNL-IPHH-----QNLAPFSTDPGFAERAARFSCFG 162
Query: 165 GGNFCDMMNTFGTPEPTGLYSR---GRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAE- 220
N + G+ E L +R G G+ G + N KS + G +M V E
Sbjct: 163 NRNLGGLNGQLGSNETQELSNRSMAGAGVESGKLSRVSSN--KSFNIGGVGSPQMVVQEG 220
Query: 221 ----VSKDASL-----SVEHGASNGSTLKN---ERKGESLV--NSHGEAKQGVGASGGDS 266
V K S+ V + S ST +N R+G S+ N GE+ A
Sbjct: 221 DQSPVQKGNSMPIPNKKVSNRFSRSSTPENAGDSREGSSVSEQNPIGESGLKGKAETNTR 280
Query: 267 DEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNT 326
G +D +AVE EP+ K + + + E D AKG
Sbjct: 281 KRKSVQTGQAKDVKAAVENH--EPNGKKIKPDEVTKK----EIDGAKG------------ 322
Query: 327 ENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREK 386
K + K S N+ KQ S+ +PPK+ YIHVRARRGQAT+SHSLAERVRREK
Sbjct: 323 ----KAEAKSSGDANQ---KQNNDSSKPPEPPKD-YIHVRARRGQATDSHSLAERVRREK 374
Query: 387 ISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEEL 446
IS+RMKFLQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+DFN+E L
Sbjct: 375 ISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMETL 434
Query: 447 LAKDVLQSRAGPSSTL----GFSPDMPLVYPPVHQSQAGLMHGALPG-------MGNPSD 495
+ KD+ + S T+ P Y +H + +H +P + + +D
Sbjct: 435 VPKDIFKGPGSSSHTVYPMDSSVPQFAYDYQSMHVTP---LHSGIPNGTEKQFSVASAND 491
Query: 496 ILRRTINSQLTPMTGGFKE 514
+++R ++ Q MT G+ E
Sbjct: 492 VMQRNLSGQ---MTNGYNE 507
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 127/176 (72%), Gaps = 7/176 (3%)
Query: 320 EAAKDNTENQRKGDHK--PSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHS 377
E +K+ E + K D P+ G K K K S + PKE YIHVRARRGQATNSHS
Sbjct: 219 EFSKEQEEKKLKIDQNMSPNLRG-KQPNKHAKDNSSNGEAPKENYIHVRARRGQATNSHS 277
Query: 378 LAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 437
LAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP
Sbjct: 278 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 337
Query: 438 RLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNP 493
L+ +IE LL+KD+L SR G +S LGF P M +P H G+ G LPG+ P
Sbjct: 338 ELNIDIERLLSKDILNSRGGSTSVLGFGPGMSSSHPYPH----GISQGTLPGIPTP 389
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 163/428 (38%), Positives = 228/428 (53%), Gaps = 51/428 (11%)
Query: 112 IDRPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDM 171
++ P + + S ++G + +P + L+ FPAD F+ERAAR+S F N +
Sbjct: 132 MNSPPKLNLSMMDSQMRGNLPIPGNSVVKHPGLAPFPAD--FVERAARYSCFGSNNPGGI 189
Query: 172 MNTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVEH 231
FG E + L +R +M V G L +S S K ++ A V + S +
Sbjct: 190 NKQFGLNE-SELINR---LMP---RVEPGK-LSRVSSNNSMKVTVSQANVQESNKSSPQD 241
Query: 232 GASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPS 291
G+ N S K R+ + +G++++ +S +E GG S +
Sbjct: 242 GSLN-SEKKFSRQSRPTTSENGDSRE-------ESSLSEQVPGGKLSMKSQNDA------ 287
Query: 292 AKGLSSKKRKR--NGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTG-NKSAGKQG 348
+S+KRK G+ E + S + A +N E++ K + G +K K+
Sbjct: 288 ----NSRKRKSIPRGKAKETPSSSPSASDVKVAAENDESKAKRSKSDETNGSDKDTAKEK 343
Query: 349 KQ----------GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLV 398
++ S+ +PPK+ YIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLV
Sbjct: 344 EEENGNQKQNKNNSKPPEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 402
Query: 399 PGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAG- 457
PGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKL++VNPR++ N+E LL+KD+ QSR
Sbjct: 403 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSSVNPRMEINMETLLSKDIFQSRGSM 462
Query: 458 PSSTLGFSPDMPLVYPPVHQSQAGL-MHGALPGMG------NPSDILRRTINSQLTPMTG 510
P S P V+P +QSQ GL + +P NP + R S P
Sbjct: 463 PHSLYPLDASTP-VFPYGYQSQQGLALQNGMPSNAETQFSMNPLNAALRRNPSMHLPHLD 521
Query: 511 GFKEPSQV 518
GF +P+ +
Sbjct: 522 GFGDPAAL 529
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 124/181 (68%), Gaps = 5/181 (2%)
Query: 298 KKRKRNGQD----IEFDQAKGGQSSGEAAKDNTENQRKGDHK-PSSTGNKSAGKQGKQGS 352
KKRKR D + Q E E ++K + K ++ K G + K S
Sbjct: 174 KKRKRLADDRSQFAHLKNMEAAQPKDECLGRQDERKQKAEQKIVANNCGKLIGAEVKMSS 233
Query: 353 QTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 412
QT + PKE+YIHVRA+RGQATNSHSLAERVRRE+ISERMKFLQDLVPGC+K+TGKAVMLD
Sbjct: 234 QTGEAPKEDYIHVRAKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLD 293
Query: 413 EIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVY 472
EIINYVQSLQRQVEFLSMKLATV P ++ IE +L+ D+ S+ G + LGF P M Y
Sbjct: 294 EIINYVQSLQRQVEFLSMKLATVYPEMNVQIERILSSDIHHSKGGTAPILGFGPGMNSAY 353
Query: 473 P 473
P
Sbjct: 354 P 354
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 126/179 (70%), Gaps = 10/179 (5%)
Query: 298 KKRKR----------NGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQ 347
K+RKR N E + G SS + + + R + ++ K A KQ
Sbjct: 165 KRRKRLAEPSSPFDPNKNAEEMHKDPSGNSSDIPKEQDEKKSRTEQNTAANLRGKQAAKQ 224
Query: 348 GKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGK 407
K+ S + + PKE YIHVRARRGQATNSHSLAERVRREKISERM+ LQ+LVPGC+K+TGK
Sbjct: 225 AKENSHSGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 284
Query: 408 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSP 466
AVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+ +IE +L+KD+L SR G ++ +G SP
Sbjct: 285 AVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIERILSKDILHSRGGNAAIMGLSP 343
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 156/437 (35%), Positives = 213/437 (48%), Gaps = 78/437 (17%)
Query: 103 GSSASLRSCIDRPLD----IGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAA 158
G++++ SC PL + +P + + P S+++F AD F ERAA
Sbjct: 137 GNNSTNTSCYTTPLSSPPKLNMSPTDQL--------STPLALNSSVAEFTADPGFAERAA 188
Query: 159 RFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNV 218
RFS F +F + FG L + G V + LK++ G QK
Sbjct: 189 RFSCFGSRSFNGRTSQFGL---NKLEMQLMGNANKLPRVSSTPSLKAV-GSHHQK----- 239
Query: 219 AEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQD 278
G N S L +R L NS + + V S + AE + +
Sbjct: 240 -------------GNKNSSPLLQDRS--ELANSTSQEESSV--SEQNPPNAELNSKKRKT 282
Query: 279 EPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSS 338
P A +P++ +D E D S+ + +K N +N K + +
Sbjct: 283 APKAKSKEAPQPNS-----------AKDAEVD----DNSNAKRSKGNEKNDVKAEEEHKG 327
Query: 339 TGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLV 398
G+ KQ K ++ +PPK+ YIHVRARRGQAT+SHSLAERVRREKISERMK LQDLV
Sbjct: 328 NGD---DKQNKASTKPPEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLV 383
Query: 399 PGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSR--- 455
PGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN RLD N++ L++KD+ Q+
Sbjct: 384 PGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDINLDTLMSKDIFQTTNQL 443
Query: 456 --------AGPSSTLGFSPDMPLVYPPVHQ--SQAGLMHGALPGMGNPSDI-LRRTINSQ 504
+ S+ G P P +H S L H ++ +P D L +N
Sbjct: 444 PHPIFPIDSSASAIFGHQPQQ---NPALHSNISNGALTHCSV----DPLDTGLSHNLNMH 496
Query: 505 LTPMTGGFKEPSQVSFY 521
L P+ G P Q +
Sbjct: 497 LPPLEGFNHTPPQFPTF 513
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 118/150 (78%), Gaps = 1/150 (0%)
Query: 318 SGEAAKDNTENQRKGDHKPS-STGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSH 376
S + AK+ E +K + P + K A KQ K +Q+ + PKE Y HVRARRGQATNSH
Sbjct: 115 SCDIAKELDEKTQKTEQNPGPNLRGKQAAKQAKDDTQSGEVPKENYFHVRARRGQATNSH 174
Query: 377 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 436
SLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVN
Sbjct: 175 SLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 234
Query: 437 PRLDFNIEELLAKDVLQSRAGPSSTLGFSP 466
P L ++E +L+KD+L SR G ++ LGFSP
Sbjct: 235 PELQIDVERILSKDILHSRGGNAAILGFSP 264
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 132/185 (71%), Gaps = 5/185 (2%)
Query: 308 EFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRA 367
EF + G+SS A + + + Q+ + ++ K KQ K Q+ + PK++YIHVRA
Sbjct: 183 EFQKDPSGESSDIAKELDEKKQKIEQNCSANLRGKQVAKQAKDNPQSGEAPKDDYIHVRA 242
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RRGQATNSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEF
Sbjct: 243 RRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 302
Query: 428 LSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGAL 487
LSMKLATVNP L ++E++ +KD+L SR G ++ LGFSP + HQ G+ +
Sbjct: 303 LSMKLATVNPELYNDVEKIQSKDILHSRGGNAAILGFSPGI-----NSHQYSHGIFQPGI 357
Query: 488 PGMGN 492
P + N
Sbjct: 358 PVILN 362
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/257 (46%), Positives = 155/257 (60%), Gaps = 27/257 (10%)
Query: 279 EPSAVEGTGGEPSAKGLS-SKKRKRNGQDIEFDQAKGGQSSGEAAKDN----TENQRKGD 333
E S VE + E A G + S R++ G D + + G+A KD+ ++ ++ +
Sbjct: 169 EQSQVEDSIPEEEAPGSAPSGNRRKRGLDHNSTFSPNKNAEGDAVKDSPGKASDGSKEHE 228
Query: 334 HKPSSTGNKSAGKQGKQ---------GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRR 384
+P N A +GKQ SQ+ + PKE +IHVRARRGQATNSHSLAERVRR
Sbjct: 229 KRPKVEQNNGADVRGKQSVKQAKDNNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRR 288
Query: 385 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
EKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+F+++
Sbjct: 289 EKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVD 348
Query: 445 ELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQ 504
+L+KD+LQSR G + P + H G HG L GM + S SQ
Sbjct: 349 RILSKDILQSRIG-HGIGAYGPGI----NSSHTFPNGSFHGTLAGMSSTS--------SQ 395
Query: 505 LTPMTGGFKEPSQVSFY 521
P+ + SFY
Sbjct: 396 FPPLPQNVLDHEFQSFY 412
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 137/199 (68%), Gaps = 11/199 (5%)
Query: 290 PSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKD------NTENQRKGDHKPSSTGN-- 341
P + G + K ++ G D F + +S + KD +T+ ++ + + + GN
Sbjct: 147 PLSVGSPNGKIRKRGLDSTFPFSSNKKSDMKLKKDVSGDSSSTQEEKNAEMEQNLGGNSR 206
Query: 342 -KSAGKQGKQGSQTS-DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVP 399
KS GKQ K+ S S + PKE YIHVRARRGQATNSHSLAERVRREKISERM+ LQ+LVP
Sbjct: 207 GKSTGKQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVP 266
Query: 400 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPS 459
GC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP ++ +IE +L+KD+ R
Sbjct: 267 GCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPDVNVDIERILSKDIFNIRGSSG 326
Query: 460 STLGFSPDMPLVYP-PVHQ 477
+ LGF P + V P P H+
Sbjct: 327 NVLGFDPGLSAVSPVPPHR 345
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 134/191 (70%), Gaps = 12/191 (6%)
Query: 298 KKRKRNGQDIEFDQAKGGQSSGEAAKD------NTENQRKGDHKPSSTGN---KSAGKQG 348
K RKR G D F + +S + KD +T+ ++ + + + GN KS GKQ
Sbjct: 3 KFRKR-GLDSTFPFSSNKKSDMKLKKDVSGDSSSTQEEKNAEMEQNLGGNSRGKSTGKQT 61
Query: 349 KQGSQTS-DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGK 407
K+ S S + PKE YIHVRARRGQATNSHSLAERVRREKISERM+ LQ+LVPGC+K+TGK
Sbjct: 62 KEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 121
Query: 408 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPD 467
AVMLDEIINYVQSLQ+QVEFLSMKLATVNP ++ +IE +L+KD+ R + LGF P
Sbjct: 122 AVMLDEIINYVQSLQQQVEFLSMKLATVNPDVNVDIERILSKDIFNIRGSSGNVLGFDPG 181
Query: 468 MPLVYP-PVHQ 477
+ V P P H+
Sbjct: 182 LSAVSPVPPHR 192
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 144/221 (65%), Gaps = 11/221 (4%)
Query: 259 VGASGGDSDEAEFSGGGGQDEPSAVEGT-----GGEPSAKGLSSK-KRKRNGQDIEFDQA 312
+ +S G S+ A+ +G G Q+ VE E G S KRKR ++E Q
Sbjct: 127 IVSSFGHSNFAQNNGAGVQNTVKNVEDAQDHRQDSENGVLGASPNGKRKRKNVEVE-KQK 185
Query: 313 KGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQA 372
+ E K+ E + G PSS ++ A K+ K S ++ KE YIHVRA+RGQA
Sbjct: 186 DQTRDLAELPKEYDEKKNSG---PSSR-SRQAVKEAKDNSSGAEASKENYIHVRAKRGQA 241
Query: 373 TNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 432
TNSHSLAERVRRE+ISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 242 TNSHSLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKL 301
Query: 433 ATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYP 473
ATVNP L+ +IE LL+KD+L SR ++ LG P + +P
Sbjct: 302 ATVNPELNVDIERLLSKDILHSRGSNATALGIGPGLSSSHP 342
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 153/420 (36%), Positives = 213/420 (50%), Gaps = 79/420 (18%)
Query: 102 KGSSASLRSCIDRPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFS 161
KG++++ SC PL +P I + + + S+++F AD F ERAA+FS
Sbjct: 144 KGNNSTNTSCYSTPLS---SPPKVNIVNSL---STTTVLNSSVAEFSADPGFAERAAKFS 197
Query: 162 SFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEV 221
F +F D +S + +N AE+
Sbjct: 198 CFGSRSFND---------------------------------------RSVQLRVNNAEL 218
Query: 222 SKDASLSVEHGASNGSTLKNERKGES-LVNSHGE--AKQGVGASGGDSDEAEFSGGGGQD 278
++ ++ ++EHG K R S L+ + G Q S ++ + G Q+
Sbjct: 219 AQRSAPAMEHGG------KLPRVSSSPLLKTLGSQMGAQENKNSAIHQEQEKMEGANSQE 272
Query: 279 EPSAVEGT-----GGEPSAKGLSSKKRKRN--GQDIEFDQ-------AKGGQSSGEAAKD 324
E + E T G + S ++S+KRK + G+ E +G + S
Sbjct: 273 ESTISEQTPNGEIGVKTSQDIMNSRKRKASSKGKAKETSNTTNPTKGVEGSEYSNSKRSK 332
Query: 325 NTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRR 384
E G K KQ K S+ +PPK +YIHVRARRGQAT+SHSLAERVRR
Sbjct: 333 PNEGNENGQVKVEEESKAEEEKQSKSNSKPPEPPK-DYIHVRARRGQATDSHSLAERVRR 391
Query: 385 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
EKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN R+D +IE
Sbjct: 392 EKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIE 451
Query: 445 ELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNP---SDILRRTI 501
L+ KDV QS +++L P+ +++P +QA +G P NP ++I RT+
Sbjct: 452 SLVTKDVFQS----NNSLATHPNA-IIFPLGSSAQA--FYGHQPQQNNPVFHNNIPNRTV 504
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 123/161 (76%), Gaps = 11/161 (6%)
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
S+ S+ K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA ML
Sbjct: 243 SKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGML 302
Query: 412 DEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMP-- 469
DEIINYVQSLQRQVEFLSMKLA VNPRLDFNI+ LAK+V + A T+G S +M
Sbjct: 303 DEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFPTIGMSSEMTNP 362
Query: 470 --LVYPPVHQ-SQAGLMHGALPGMGNPSDI-LRRTINSQLT 506
L Y P+ Q + G+ G NP++I LRRTI++ ++
Sbjct: 363 SYLHYDPIQQVATCGVEMGI-----NPAEIALRRTISAPVS 398
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 123/161 (76%), Gaps = 11/161 (6%)
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
S+ S+ K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA ML
Sbjct: 132 SKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGML 191
Query: 412 DEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMP-- 469
DEIINYVQSLQRQVEFLSMKLA VNPRLDFNI+ LAK+V + A T+G S +M
Sbjct: 192 DEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFPTIGMSSEMTNP 251
Query: 470 --LVYPPVHQ-SQAGLMHGALPGMGNPSDI-LRRTINSQLT 506
L Y P+ Q + G+ G NP++I LRRTI++ ++
Sbjct: 252 SYLHYDPIQQVATCGVEMGI-----NPAEIALRRTISAPVS 287
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 154/256 (60%), Gaps = 26/256 (10%)
Query: 279 EPSAVEGTGGEPSAKGLS-SKKRKRNGQDIEFDQAKGGQSSGEAAKDN----TENQRKGD 333
E S VE + E A G + S R++ G D + + G+A D+ + ++ +
Sbjct: 164 EQSQVEDSIPEEEAPGSAPSGNRRKRGLDHNSTFSPNKNAEGDAVNDSPGKASNGPKEHE 223
Query: 334 HKPSSTGNKSAGKQGKQ--------GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRRE 385
+P N A +GKQ SQ+ + PKE +IHVRARRGQATNSHSLAERVRRE
Sbjct: 224 KRPKGEQNNGADVRGKQSVKQAKDNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRRE 283
Query: 386 KISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEE 445
KISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP L+F+++
Sbjct: 284 KISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVDR 343
Query: 446 LLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQL 505
+L+KD+LQSR G + P + H G HG L GM PS +SQ
Sbjct: 344 ILSKDILQSRIG-HGIGAYGPGI----NSSHTFPNGSFHGTLAGM--PS------TSSQF 390
Query: 506 TPMTGGFKEPSQVSFY 521
P+ + SFY
Sbjct: 391 PPLPQNVLDHEFQSFY 406
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 195/392 (49%), Gaps = 72/392 (18%)
Query: 143 SLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNG 202
S+++F AD F ERAA+FS F +F GR G NG
Sbjct: 169 SVAEFTADPGFAERAAKFSCFGSRSF-----------------NGRISQLGLNNAEMANG 211
Query: 203 LKSLSGGQSQKNEMNVAEVSKDASL-SVEHGASNGSTLKNERKGESLVNSH--------- 252
L G +A V+ L +V N ST +R L NS
Sbjct: 212 CNPLMGNGK------LARVASSPLLKAVGSQKGNKSTPLQDRS--ELTNSQESSVSEQIP 263
Query: 253 -GEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQ 311
GEA G+ AS + + G+ + SA P A + N
Sbjct: 264 SGEA--GLKASNELNSRKRKALSKGKAKQSA-----SNPPASATKDAETDDNSNTKRIKP 316
Query: 312 AKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQ 371
+G ++N + K + +P +G+ Q K S+ +PPK+ YIHVRARRGQ
Sbjct: 317 NEG--------EENENSPVKAEEEPKGSGDD---IQNKANSRPPEPPKD-YIHVRARRGQ 364
Query: 372 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 431
AT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMK
Sbjct: 365 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 424
Query: 432 LATVNPRLDFNIEELLAKDVLQ-SRAGPSSTLGFSPDMPLVY--------PPVHQ--SQA 480
LA+VN RLDFN++ L++KD+ Q S+ P P PP+H S
Sbjct: 425 LASVNTRLDFNMDTLISKDIFQSSQPLPHPIFPLDSSAPAAIFSHQQQQNPPLHSNISNG 484
Query: 481 GLMHGALPGMGNPSDI--LRRTINSQLTPMTG 510
+ H ++ +P D L +T+N+QL P+ G
Sbjct: 485 AVTHCSV----DPLDTTGLCQTLNAQLPPLDG 512
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 180/327 (55%), Gaps = 52/327 (15%)
Query: 143 SLSQFPADSAFIERAARFSSFS----GGNFCDM-MNTFGTPEPTGLYSRGRGMMQGPQEV 197
++++F AD F ERAA+FS F G + +N + + L G+ + + V
Sbjct: 185 TVAKFSADPGFAERAAKFSCFGSRSLNGRTTQLGLNNAELAQRSSLVENGKRLPR----V 240
Query: 198 FAGNGLKSLS---GGQSQKNE-----MNVAEVSKDASLSVEHGASNGSTLKNERKGESLV 249
+ LK L G Q KN M +A +++++S + NG T K V
Sbjct: 241 SSSPSLKVLESQMGTQENKNSPLQDLMELANSQEESTISEQ--TPNGDT---GVKPSPYV 295
Query: 250 NSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEF 309
NS ++ G S G + E + P + E S + + + G+ E
Sbjct: 296 NS----RKRKGPSKGKAKET----SASINPPMGLSLQAAEASEDWNAKRSKPNAGEGNEN 347
Query: 310 DQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAG--KQGKQGSQTSDPPKEEYIHVRA 367
Q K E + KG GN +A KQ K S+ +PPK +YIHVRA
Sbjct: 348 GQVKA------------EEESKG-------GNSNANDEKQNKSNSKPPEPPK-DYIHVRA 387
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEF
Sbjct: 388 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 447
Query: 428 LSMKLATVNPRLDFNIEELLAKDVLQS 454
LSMKLA+VN RLDF+IE L++KD+ QS
Sbjct: 448 LSMKLASVNTRLDFSIESLISKDIFQS 474
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 130/186 (69%), Gaps = 14/186 (7%)
Query: 310 DQAKGGQSSGEAAKDNTENQR--KGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRA 367
+Q KG + AK+ ++ K D S ++ K K+ ++ +PPK+ YIHVRA
Sbjct: 317 EQVKGKRQRNPNAKEESKQHGNGKADRSSSDNSGSTSPKSVKENTKPPEPPKD-YIHVRA 375
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RRGQAT+SHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEF
Sbjct: 376 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 435
Query: 428 LSMKLATVNPRLDFNIEELLAKDVLQSRAGPSS-TLGFSPDMPLVYP-PVHQSQAGLMHG 485
LSMKLA VNPRL+FN+E LL K+V RA P++ LG P Y +HQ+Q H
Sbjct: 436 LSMKLAAVNPRLEFNVESLLGKEVPHGRASPTNFVLG-----PQSYSQQLHQAQ----HS 486
Query: 486 ALPGMG 491
AL G
Sbjct: 487 ALQLAG 492
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 120/153 (78%), Gaps = 2/153 (1%)
Query: 316 QSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQ--GKQGSQTSDPPKEEYIHVRARRGQAT 373
Q + +A ++ E+ ++G+ + K+ K+ SQ+ + PKE YIH+RARRGQAT
Sbjct: 103 QWNKKAVEEFQEDPQRGNDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQAT 162
Query: 374 NSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 433
NSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLA
Sbjct: 163 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 222
Query: 434 TVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSP 466
TVNP ++ +I+ +LAKD+LQSR + TLG +P
Sbjct: 223 TVNPEINIDIDRILAKDLLQSRDRNTPTLGLNP 255
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 116/142 (81%), Gaps = 6/142 (4%)
Query: 325 NTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRR 384
N ++Q+K HK ++S K+ SQ+ + PKE YIH+RARRGQATNSHSLAERVRR
Sbjct: 172 NDQSQKK--HK----NDQSKETVNKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRR 225
Query: 385 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
EKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP ++ +I+
Sbjct: 226 EKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDID 285
Query: 445 ELLAKDVLQSRAGPSSTLGFSP 466
+LAKD+LQSR + TLG +P
Sbjct: 286 RILAKDLLQSRDRNTPTLGLNP 307
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 178/325 (54%), Gaps = 50/325 (15%)
Query: 143 SLSQFPADSAFIERAARFSSFSGGNF-------CDMMNTFGTPEPTGLYSRGRGMMQGPQ 195
++++F AD F ERAA+ S F +F C + + L G+ +
Sbjct: 188 TVAEFSADPGFAERAAKLSCFGSRSFNGRTTQLCLNIAELAQ-RSSPLVENGKKQLPRVS 246
Query: 196 EVFAGNGLKSLSGGQSQKNE-----MNVAEVSKDASLSVEHGASNGSTLKNERKGESLVN 250
+ L S G Q KN M VA +++++S + NG T K VN
Sbjct: 247 SSPSLKVLGSQMGTQENKNSPLQDLMEVANSQEESAISEQ--TPNGDT---GEKPSPYVN 301
Query: 251 SHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSK-KRKRNGQDIEF 309
S ++ G S G + E S + P A E + + + ++ + NGQ
Sbjct: 302 S----RKRKGPSKGKAKETSTS----TNPPMAAEASDDSNAKRSKPNEGEGNENGQVKAE 353
Query: 310 DQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARR 369
+++KGG +S N + KQ K S+ +PPK+ YIHVRARR
Sbjct: 354 EESKGGNNS----------------------NANDEKQNKSNSKPPEPPKD-YIHVRARR 390
Query: 370 GQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
GQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLS
Sbjct: 391 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 450
Query: 430 MKLATVNPRLDFNIEELLAKDVLQS 454
MKLA+VN RLDF+IE L++KD+ QS
Sbjct: 451 MKLASVNTRLDFSIESLISKDIFQS 475
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 140/217 (64%), Gaps = 19/217 (8%)
Query: 278 DEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNT------ENQRK 331
+E S +EG+ E A KRKR G D F + + GEA KD++ + + +
Sbjct: 133 NEQSKLEGSTSEEGA-APDEHKRKR-GLDYNFTFSSNKNAEGEALKDSSGKSCDDDVKEQ 190
Query: 332 GDHKPSSTGNKSAG-------KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRR 384
+ KP N +A KQ K S++ + KE +IHVRARRGQATNSHSLAERVRR
Sbjct: 191 CEKKPRVAQNSTANLCGKQLLKQKKDDSESEEGSKENFIHVRARRGQATNSHSLAERVRR 250
Query: 385 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
EKISERM+ LQ+LVPGC K TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP+L+FN+E
Sbjct: 251 EKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPQLNFNVE 310
Query: 445 ELLAKDVLQSRAGPSSTLGFSPDMP---LVYPPVHQS 478
++ +KD GP G S MP +PP+ QS
Sbjct: 311 QICSKDS-HIGHGPIGGYGASISMPNPSTQFPPMPQS 346
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 105/118 (88%)
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
K+ SQ+ + PKE YIH+RARRGQATNSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKA
Sbjct: 188 KESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 247
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSP 466
VMLDEIINYVQSLQ+QVEFLSMKLATVNP ++ +I+ +LAKD+LQSR + TLG +P
Sbjct: 248 VMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQSRDRNTPTLGLNP 305
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/247 (48%), Positives = 153/247 (61%), Gaps = 39/247 (15%)
Query: 290 PSAKGLSSK---------KRKRNGQD----IEFDQAKGGQSSGEAAKDNTENQRKGDHKP 336
PSA+ SS+ KRKR+ +D I DQ +G S +++K+ E+ KG +
Sbjct: 91 PSAEACSSRVPEPDSNSNKRKRSNEDVLGMIGTDQDQG-MPSVDSSKERGEDDAKGKEET 149
Query: 337 SSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 396
K GK G+ +D E YIHVRAR+GQATN HSLAER+RREKISERMK LQD
Sbjct: 150 PPATRKKKGK----GASAADGESESYIHVRARKGQATNRHSLAERLRREKISERMKLLQD 205
Query: 397 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRA 456
LVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLA VNP+L NI++LL+KD + A
Sbjct: 206 LVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPQLGLNIKQLLSKDFCKKCA 265
Query: 457 ----------------GPSSTLG--FSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILR 498
S+ LG FS +M + PP+ S++G++ G + G+ N SD R
Sbjct: 266 PKFGGMQLFRAPSGPSSSSAHLGFSFSHEMMPILPPM--SRSGVLPGGVHGLAN-SDGFR 322
Query: 499 RTINSQL 505
+ QL
Sbjct: 323 TAMEEQL 329
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/138 (69%), Positives = 109/138 (78%), Gaps = 3/138 (2%)
Query: 346 KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 405
KQ K S +PPK+ YIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGC+KVT
Sbjct: 9 KQKKDNSNPPEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 67
Query: 406 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAG-PSSTLGF 464
GKAVMLDEIINYVQSLQRQVEFLSMK+ATVNP+++ N+E L+KD+ QSR P
Sbjct: 68 GKAVMLDEIINYVQSLQRQVEFLSMKMATVNPKMEINMETFLSKDIFQSRGSMPHGLYPL 127
Query: 465 SPDMPLVYPPVHQSQAGL 482
P +P +QSQ GL
Sbjct: 128 DSSTP-AFPYGYQSQQGL 144
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 149/238 (62%), Gaps = 23/238 (9%)
Query: 305 QDIEF-DQAKGGQSSGEAAKDNT-------ENQRKGDHKPSST----GNK--SAGKQGKQ 350
QDI+ D+ GG + +D + Q +G +P GN+ S Q K+
Sbjct: 64 QDIQMSDEHSGGVKKRKGMEDRVTLLHNAGDQQTEGSSQPERNSMEEGNRKISPKMQSKE 123
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
S D KE+Y+HVRA+RGQATNSHSLAER+RR+KISERMK LQDLVPGC+K+TGKAVM
Sbjct: 124 DSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVM 183
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPL 470
LDEIINYVQSLQRQVEFLSMKLATVNP L F+IE++++K ++ S+ + G P
Sbjct: 184 LDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQIISKQMMLSQDRHLAFYGVDPGSSS 243
Query: 471 VYPPVHQSQAGLMH-GALPGMGNPSDILRRTIN-----SQLTPMTGGFKEPSQVSFYP 522
+ P +Q G+M + + NP D+L TI+ +Q+ M G + Q++F P
Sbjct: 244 LTAPFNQ---GIMQPEMMCNISNPVDVLHGTIHDLSTMNQIPSMWEGVQNMPQMNFNP 298
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 130/182 (71%), Gaps = 9/182 (4%)
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
Q K+ S D KE+Y+H+RA+RGQATNSHSLAER+RR+KISERMK LQDLVPGCSK+TG
Sbjct: 120 QSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITG 179
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSP 466
KAVMLDEIINYVQSLQRQVEFLSMKL+TVNP L F+IE++++K ++ S+ + G P
Sbjct: 180 KAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDP 239
Query: 467 DMPLVYPPVHQSQAGLMHGA-LPGMGNPSDILRRTIN-----SQLTPMTGGFKEPSQVSF 520
+ P +Q G++ A + + NP+D+L TI+ +Q+ M G + Q++F
Sbjct: 240 GSSSLTAPFNQ---GIVQPAMMCNISNPADVLHGTIHDVSTMNQIPSMWEGLQSMPQMNF 296
Query: 521 YP 522
P
Sbjct: 297 NP 298
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 195/370 (52%), Gaps = 73/370 (19%)
Query: 143 SLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNG 202
S+++F AD F ERAA+FS F +F D G
Sbjct: 144 SVAEFSADPGFAERAAKFSCFGSRSFNDRSVQLG-------------------------- 177
Query: 203 LKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERKGES-LVNSHGE--AKQGV 259
+N AE+++ ++ ++EHG K R S L+ + G Q
Sbjct: 178 -------------VNNAELAQRSAPAMEHGG------KLPRVSSSPLLKTLGSQMGAQEN 218
Query: 260 GASGGDSDEAEFSGGGGQDEPSAVEG-----TGGEPSAKGLSSKKRKRN--GQDIE---- 308
S ++ + G Q+E + E G + S ++S+KRK + G+ E
Sbjct: 219 KNSAIHQEQEKMEGANSQEESTISEQAPNGEIGVKTSQDMMNSRKRKASSKGKAKETSNS 278
Query: 309 FDQAKGGQSSGEA-AKDNTENQRKGDHK----PSSTGNKSAGKQGKQGSQTSDPPKEEYI 363
F+ KG + S ++ +K + N+ G+ KQ K S+ +PPK +YI
Sbjct: 279 FNPTKGVEGSEDSNSKRSKPNEGDGNENGQVKVEEESKAEEEKQNKSNSKPPEPPK-DYI 337
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
HVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQR
Sbjct: 338 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 397
Query: 424 QVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLM 483
QVEFLSMKLA+VN R+D +IE L++KDV QS +++L P+ V+P S A
Sbjct: 398 QVEFLSMKLASVNTRMDLSIENLISKDVFQS----NNSLATLPNA--VFP--LDSSAQTF 449
Query: 484 HGALPGMGNP 493
+G P NP
Sbjct: 450 YGHQPQQNNP 459
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 115/142 (80%), Gaps = 6/142 (4%)
Query: 325 NTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRR 384
N ++Q+K HK ++S K+ SQ+ + PKE YIH+RARRGQATNSHSLAERVRR
Sbjct: 172 NDQSQKK--HK----NDQSKETVNKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRR 225
Query: 385 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
EKISERM+ LQ+L PGC+K+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP ++ +I+
Sbjct: 226 EKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDID 285
Query: 445 ELLAKDVLQSRAGPSSTLGFSP 466
+LAKD+LQSR + TLG +P
Sbjct: 286 RILAKDLLQSRDRNTPTLGLNP 307
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 122/162 (75%), Gaps = 9/162 (5%)
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
K+ S+ SD K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA
Sbjct: 175 KENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 234
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSS------TL 462
MLDEIINYVQSLQ+QVEFLSMKLATVNPRLDFNI++L K+V + +S +
Sbjct: 235 GMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPNCDANASFQAMGMST 294
Query: 463 GFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDI-LRRTINS 503
G + + P Y + Q + +G L NPSD+ LRR+I++
Sbjct: 295 GLNSNNP--YLQFNSPQQFVPYGGLDAGMNPSDMGLRRSISA 334
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 122/162 (75%), Gaps = 9/162 (5%)
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
K+ S+ SD K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA
Sbjct: 175 KENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 234
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSS------TL 462
MLDEIINYVQSLQ+QVEFLSMKLATVNPRLDFNI++L K+V + +S +
Sbjct: 235 GMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPNCDANASFQAMGMST 294
Query: 463 GFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDI-LRRTINS 503
G + + P Y + Q + +G L NPSD+ LRR+I++
Sbjct: 295 GLNSNNP--YLQFNSPQQFVPYGGLDAGMNPSDMGLRRSISA 334
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 117/249 (46%), Positives = 155/249 (62%), Gaps = 28/249 (11%)
Query: 291 SAKGLSSKKRKRNGQDI---EFDQAKGGQSSGE----------AAKDNTENQRKGDHKPS 337
SAK + K++ +N + + + Q K ++SGE + K+ N K +++ +
Sbjct: 127 SAKENTKKRKPQNSKVVAASDNKQDKRVKASGEEGESKVTEQTSNKNGKSNANKNNNRET 186
Query: 338 STGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 397
++ S K +GS+ + K EYIHVRARRGQAT+SHSLAERVRREKISERMK+LQDL
Sbjct: 187 TSAETS--KDNSKGSEVQNQ-KPEYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 243
Query: 398 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAG 457
VPGC+KV GKA MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFN++EL K+V S A
Sbjct: 244 VPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNLDELFTKEVFPSCAQ 303
Query: 458 PSSTLGFSPDMPL----VYPPVHQSQ------AGLMHGALPGMGNPSDILRRTINSQLTP 507
+G DM + Y P + +Q GL++ G+ P+ LRR I++ P
Sbjct: 304 SFPNIGMPLDMSMSNNPSYLPFNSAQQLVSCCGGLINNM--GISPPNMGLRRNISTSPVP 361
Query: 508 MTGGFKEPS 516
+ F + S
Sbjct: 362 LPETFLDSS 370
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 130/182 (71%), Gaps = 9/182 (4%)
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
Q K+ S D KE+Y+H+RA+RGQATNSHSLAER+RR+KISERMK LQDLVPGCSK+TG
Sbjct: 13 QSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITG 72
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSP 466
KAVMLDEIINYVQSLQRQVEFLSMKL+TVNP L F+IE++++K ++ S+ + G P
Sbjct: 73 KAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHLAFYGVDP 132
Query: 467 DMPLVYPPVHQSQAGLMHGA-LPGMGNPSDILRRTIN-----SQLTPMTGGFKEPSQVSF 520
+ P +Q G++ A + + NP+D+L TI+ +Q+ M G + Q++F
Sbjct: 133 GSSSLTAPFNQ---GIVQPAMMCNISNPADVLHGTIHDVSTMNQIPSMWEGLQSMPQMNF 189
Query: 521 YP 522
P
Sbjct: 190 NP 191
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/160 (61%), Positives = 120/160 (75%), Gaps = 5/160 (3%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
KE Y HVRAR+GQATN+HSLAER+RREKISERMK LQDLVPGCSKVTGKA+MLDEIINYV
Sbjct: 170 KEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYV 229
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELL--AKDVLQSRAGPSST-LGFSPDMPLVYPPV 475
QSLQRQVEFLSMKL+ VNPR+D +IE L+ +KDVL+ PSS +GFS ++ P +
Sbjct: 230 QSLQRQVEFLSMKLSAVNPRIDLDIESLVNNSKDVLRFPGQPSSAPMGFSFSTEMM-PGL 288
Query: 476 HQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEP 515
S+ G++ G + GM NP D+ + Q G F+EP
Sbjct: 289 QLSRPGILQGGVHGMINP-DVFTSLMQKQQQNDKGAFREP 327
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 177/346 (51%), Gaps = 73/346 (21%)
Query: 144 LSQFPADSAFIERAARFSSFSG-GNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNG 202
L QF AD F ERAAR S F G P GL G A
Sbjct: 114 LDQFLADPGFAERAARLSGFDARGGGGGGGYGGAGPAQFGLPDAG-----------AAGA 162
Query: 203 LKSLSGGQSQKNEMNVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGVGAS 262
K + G + ++E +V++ + + GAS+G+ K + G+
Sbjct: 163 SKEMELGNT-RDESSVSDPAPGGAEIPPKGASDGNARKRKASGK---------------- 205
Query: 263 GGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAA 322
G G+D P + +AK SS KR K + S AA
Sbjct: 206 -----------GKGKDSPMSTS------AAKEDSSGKR-----------CKSTEESNAAA 237
Query: 323 KDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERV 382
+ EN KG S++ N KQGK S P ++YIHVRARRG+AT+SHSLAERV
Sbjct: 238 E---ENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERV 294
Query: 383 RREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF- 441
RREKIS+RMK LQDLVPGC+KV GKAVMLDEIINYVQSLQRQVEFLSMKLATVNP+LDF
Sbjct: 295 RREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 354
Query: 442 NIEELLAKDV------LQSRAGPSSTLGFSPDMPLVYPPVHQSQAG 481
N+ LLAKD+ LQS P T G PL Y ++Q Q G
Sbjct: 355 NLPNLLAKDMHQSCSPLQSSHFPLETSG----APLPY--INQPQQG 394
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 140/222 (63%), Gaps = 15/222 (6%)
Query: 313 KGGQSSGEAAKDNTENQRKGDHKPS----STGNK--SAGKQGKQGSQTSDPPKEEYIHVR 366
KG + D + Q KG +P GN+ S Q K+ S D KE+Y+H+R
Sbjct: 48 KGVEDCVTLLHDAGDQQTKGSPQPERNSVEEGNRKISPKMQSKEDSSDGDGTKEDYVHIR 107
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A+RGQATNSHSLAER+RR+KISERMK LQDLVPGCSK+TGKAVMLDEIINYVQSLQRQVE
Sbjct: 108 AKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVE 167
Query: 427 FLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGA 486
FLSMKLATVNP L F+IE++++K +L S+ + G P + P +Q G+M
Sbjct: 168 FLSMKLATVNPELGFDIEQIISKQMLLSQDRHLAFYGVEPGSSGLTGPFNQ---GIMQPE 224
Query: 487 L-PGMGNPSDILRRTIN-----SQLTPMTGGFKEPSQVSFYP 522
L + NP D+L I+ + + M G + Q++F P
Sbjct: 225 LMCTIANPVDVLHGAIHDASTMNHIPSMWEGLQNMPQMNFNP 266
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 135/337 (40%), Positives = 185/337 (54%), Gaps = 74/337 (21%)
Query: 144 LSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNGL 203
+++F D F++RAA+FS F +F + N L R +M+ NG+
Sbjct: 93 VAEFSPDPGFVQRAAKFSCFGSKSFNERGNQM-VMNNVELAQRSHNLME--------NGM 143
Query: 204 KSLSGGQSQKNEMNVAEVSKDASLS------VEHGASNGSTLKNERKGESLVNSHGEAKQ 257
K ++ VS SL V H N S+L+ E + + NS E+K
Sbjct: 144 K-------------LSRVSSSPSLKTFGSQMVNHENKN-SSLQQENEKMEVANSQEESKI 189
Query: 258 ----------GVGAS-GGDSDEAEFSGGGGQDEPSA-----VEGTGGEPSAKGLSSKKRK 301
GV AS +S + + S G+ S VEG+G + +AK + + + +
Sbjct: 190 SEQNTPNGEIGVKASPDMNSRKRKASSSKGKAPNSTNPTKGVEGSGEDFNAKKIKANEGE 249
Query: 302 RNG---QDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPP 358
RN +++E + +G ++GE E Q K D KP P
Sbjct: 250 RNENGVRNMEEEIKEGTPNAGE------EKQNKSDSKPPE-------------------P 284
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
+++YIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYV
Sbjct: 285 QKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYV 344
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEEL-LAKDVLQS 454
QSLQRQVEFLSMKL++VN ++D +IE L ++KD+ QS
Sbjct: 345 QSLQRQVEFLSMKLSSVNTKMDLSIESLVVSKDIFQS 381
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 129/189 (68%), Gaps = 11/189 (5%)
Query: 342 KSAGK-QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 400
KS K Q K+ S D KE+Y+HVRA+RGQATNSHSLAER+RR+KISERMK LQDLVPG
Sbjct: 123 KSCSKMQSKEDSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPG 182
Query: 401 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSS 460
CSK+TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP L F+IE++L+K ++ S+ +
Sbjct: 183 CSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELSFDIEQILSKQMMLSQDRHLA 242
Query: 461 TLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILR-------RTINSQLTPMTGGFK 513
G P + H +Q + L + NP+D+L+ T+N Q+ M G +
Sbjct: 243 FYGVDPGSSALV--AHFNQGIMQPEMLCNVSNPADVLQGTTIQDISTVN-QIPAMWEGLQ 299
Query: 514 EPSQVSFYP 522
+++ P
Sbjct: 300 NIPHLNYNP 308
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/163 (60%), Positives = 119/163 (73%), Gaps = 7/163 (4%)
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
KQ S+ S+ P +YIHVRARRGQAT+SHSLAERVRREKISERM +LQDLVPGC+KVTGKA
Sbjct: 180 KQNSKASEKP--DYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKA 237
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDM 468
MLDEIINYVQSLQRQVEFLSMKLA VNPRLDF++++L KDV + A +G S
Sbjct: 238 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFSMDDLFDKDVFPTCAANFPNIGMSSTS 297
Query: 469 PLV----YPPVHQSQAGLMHGALPGMGNPSDI-LRRTINSQLT 506
+ Y P + Q + L NPSD+ LRRTI++ ++
Sbjct: 298 SDITNPAYLPFNSPQQIFQYDGLDTGINPSDVGLRRTISAPVS 340
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 138/214 (64%), Gaps = 20/214 (9%)
Query: 296 SSKKRKRNGQDIEFDQAK---GGQSS--GEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQ 350
S KKR+R+ + D AK G + + G+ AK E + K AG++ K+
Sbjct: 84 SKKKRRRSDEVSGTDHAKTSNGAEETERGKDAKGEEEAGPAAAAATGQSKGKGAGERQKE 143
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
G Y+HVRAR QATNSHS+AE++RREKISERMK LQDLVPGCSKVTGKAVM
Sbjct: 144 G----------YVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVM 193
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ-SRAGPSSTLGFSPDMP 469
LDEIINYVQSLQRQVEFLSMKL+TVNPRL +IE LLAKD+L S A + +G S
Sbjct: 194 LDEIINYVQSLQRQVEFLSMKLSTVNPRLGVDIELLLAKDILPFSWASSTGPMGLSFSQE 253
Query: 470 LVYPPVHQSQAGLMHGALPGMGNPSDILRRTINS 503
++ P SQ G++ G + GM NP D LR + S
Sbjct: 254 MMPKP---SQPGMLQGDVHGMANP-DTLRALMQS 283
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 141/230 (61%), Gaps = 29/230 (12%)
Query: 291 SAKGLSSKKR--KRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQG 348
+AK L+ ++ KR E + A+ + G+AA+ N+EN K KQG
Sbjct: 218 AAKDLAKEESGGKRCKSADESNGAEDNSTKGKAAQSNSENGGK--------------KQG 263
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
K + P ++YIHVRARRG+AT+SHSLAERVRREKIS+RMK LQDLVPGC+KV GKA
Sbjct: 264 KDSTSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKA 323
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDVLQSRAGPSSTLGFSPD 467
VMLDEIINYVQSLQRQVEFLSMKLATVNP+LDF N+ LL KD+ QS GP F
Sbjct: 324 VMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLPKDIHQS-CGPLQNSHF--- 379
Query: 468 MPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQ--LTPMTGGFKEP 515
P+ S A L + P GNP ++SQ + P+ F P
Sbjct: 380 ------PLETSGAPLPYLNQPHQGNPLGCSLTGMDSQSSMHPLDPAFCRP 423
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 113/211 (53%), Positives = 144/211 (68%), Gaps = 28/211 (13%)
Query: 298 KKRKRNGQDI---EFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQT 354
K+ K +G+D+ + +QA ++SG++ P ST + K+ +
Sbjct: 12 KRHKSDGEDVRAVKAEQASASENSGDSIS------------PRSTLKGATSKRPQ----- 54
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
D PK++YIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI
Sbjct: 55 -DFPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 113
Query: 415 INYVQSLQRQVEFLSMKLATVN-PRLDFNIEELLAKDV-LQSRAGPSSTLGFSPDMPLVY 472
INYVQSLQRQVEFLSMKLATVN PRLD++ +LL+K++ +QSR+ ++ LG PD PL
Sbjct: 114 INYVQSLQRQVEFLSMKLATVNVPRLDYSY-DLLSKEMPMQSRSPETTLLG--PD-PLAA 169
Query: 473 PPVHQSQAGLMHG-ALPGMGNPSDILRRTIN 502
P SQ M + P + LRR+++
Sbjct: 170 PFGDHSQCSPMQSISTPSCHFEALYLRRSMS 200
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/136 (68%), Positives = 110/136 (80%), Gaps = 7/136 (5%)
Query: 327 ENQRKGDHKPSSTGNKSAGKQG--KQGSQTSDPP----KEEYIHVRARRGQATNSHSLAE 380
+ QR G K + ++++G + TS PP K++YIHVRARRGQAT+SHSLAE
Sbjct: 25 KRQRSGLVKAERSASENSGDSASPRSLKATSKPPQDLSKQDYIHVRARRGQATDSHSLAE 84
Query: 381 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 440
RVRREKISERMKFLQDLVPGCSK+TGKAVMLDEIINYVQSLQRQ+EFLSMKLA VNPRLD
Sbjct: 85 RVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQIEFLSMKLAAVNPRLD 144
Query: 441 FNIEELLAKDVLQSRA 456
++ +LL KD+LQSR+
Sbjct: 145 YSY-DLLGKDMLQSRS 159
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 112/144 (77%), Gaps = 3/144 (2%)
Query: 310 DQAKGGQSSGEAAKDNTENQR--KGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRA 367
+Q KG + AK+ ++ K D S ++ K K+ ++ +PPK+ YIHVRA
Sbjct: 2 EQVKGKRQRNPNAKEESKQHGNGKADRSSSDNSGSTSPKSVKENTKPPEPPKD-YIHVRA 60
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RRGQAT+SHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEF
Sbjct: 61 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 120
Query: 428 LSMKLATVNPRLDFNIEELLAKDV 451
LSMKLA VNPRL+FN+E LL K+V
Sbjct: 121 LSMKLAAVNPRLEFNVESLLGKEV 144
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/182 (58%), Positives = 123/182 (67%), Gaps = 11/182 (6%)
Query: 313 KGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQA 372
K +S+ E+ EN KG S++ N KQGK S P ++YIHVRARRG+A
Sbjct: 22 KRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPPKDYIHVRARRGEA 81
Query: 373 TNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 432
T+SHSLAERVRREKIS+RMK LQDLVPGC+KV GKAVMLDEIINYVQSLQRQVEFLSMKL
Sbjct: 82 TDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKL 141
Query: 433 ATVNPRLDF-NIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMG 491
ATVNP+LDF N+ LLAKD+ QS P + F P+ S A L + P G
Sbjct: 142 ATVNPQLDFNNLPNLLAKDMHQS-CSPLQSSHF---------PLETSGAPLPYINQPQQG 191
Query: 492 NP 493
NP
Sbjct: 192 NP 193
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 107/142 (75%), Gaps = 2/142 (1%)
Query: 318 SGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHS 377
S E + EN KG S + KQGK G+ P ++YIHVRARRG+AT+SHS
Sbjct: 205 SAEESNGAEENSGKGKAAAQSNSDNGGKKQGKDGASKPPEPPKDYIHVRARRGEATDSHS 264
Query: 378 LAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 437
LAERVRREKIS+RMK LQDLVPGC+KV GKAVMLDEIINYVQSLQRQVEFLSMKLATVNP
Sbjct: 265 LAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 324
Query: 438 RLDF-NIEELLAKDVLQSRAGP 458
+LDF N+ LL KD+ QS GP
Sbjct: 325 QLDFNNLPNLLPKDMHQS-CGP 345
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/131 (73%), Positives = 107/131 (81%), Gaps = 4/131 (3%)
Query: 327 ENQRKGDHKPSSTGNKSAGKQGKQG--SQTSDPPKEEYIHVRARRGQATNSHSLAERVRR 384
EN KG SS+ N KQGK S+ +PPK+ YIHVRARRG+AT+SHSLAERVRR
Sbjct: 231 ENCAKGKAAQSSSENGGGKKQGKDAGASKLPEPPKD-YIHVRARRGEATDSHSLAERVRR 289
Query: 385 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF-NI 443
EKIS+RMK LQDLVPGC+KV GKAVMLDEIINYVQSLQRQVEFLSMKLATVNP+LDF N+
Sbjct: 290 EKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNL 349
Query: 444 EELLAKDVLQS 454
LLAKD+ QS
Sbjct: 350 PNLLAKDMQQS 360
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/182 (58%), Positives = 123/182 (67%), Gaps = 11/182 (6%)
Query: 313 KGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQA 372
K +S+ E+ EN KG S++ N KQGK S P ++YIHVRARRG+A
Sbjct: 227 KRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPPKDYIHVRARRGEA 286
Query: 373 TNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 432
T+SHSLAERVRREKIS+RMK LQDLVPGC+KV GKAVMLDEIINYVQSLQRQVEFLSMKL
Sbjct: 287 TDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKL 346
Query: 433 ATVNPRLDF-NIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMG 491
ATVNP+LDF N+ LLAKD+ QS P + F P+ S A L + P G
Sbjct: 347 ATVNPQLDFNNLPNLLAKDMHQS-CSPLQSSHF---------PLETSGAPLPYINQPQQG 396
Query: 492 NP 493
NP
Sbjct: 397 NP 398
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/102 (84%), Positives = 95/102 (93%)
Query: 350 QGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 409
+ S+ +PPK++YIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV
Sbjct: 1 ENSKPPEPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 60
Query: 410 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
MLDEIINYVQSLQRQVEFLSMKLA VNPRLD N++ LL K+V
Sbjct: 61 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDINLDGLLTKEV 102
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 121/177 (68%), Gaps = 18/177 (10%)
Query: 279 EPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSS 338
+P A GE S G S+KRK K Q+S A + E + K D P
Sbjct: 182 KPLASHVPAGESS--GELSRKRK----------TKSKQNSPSAVSSSKEIEEKEDSDP-- 227
Query: 339 TGNKSAGKQGKQGSQT-SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 397
K K + G +T S P ++YIHVRARRGQAT+SHSLAERVRREKISERMK LQDL
Sbjct: 228 ---KRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 284
Query: 398 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQS 454
VPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKL++VN RLDFN++ LL+KD+ S
Sbjct: 285 VPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPS 341
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 121/177 (68%), Gaps = 18/177 (10%)
Query: 279 EPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSS 338
+P A GE S G S+KRK K Q+S A + E + K D P
Sbjct: 188 KPLASHVPAGESS--GELSRKRK----------TKSKQNSPSAVSSSKEIEEKEDSDP-- 233
Query: 339 TGNKSAGKQGKQGSQT-SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 397
K K + G +T S P ++YIHVRARRGQAT+SHSLAERVRREKISERMK LQDL
Sbjct: 234 ---KRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 290
Query: 398 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQS 454
VPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKL++VN RLDFN++ LL+KD+ S
Sbjct: 291 VPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPS 347
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 121/177 (68%), Gaps = 18/177 (10%)
Query: 279 EPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSS 338
+P A GE S G S+KRK K Q+S A + E + K D P
Sbjct: 188 KPLASHVPAGESS--GELSRKRK----------TKSKQNSPSAVSSSKEIEEKEDSDP-- 233
Query: 339 TGNKSAGKQGKQGSQT-SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 397
K K + G +T S P ++YIHVRARRGQAT+SHSLAERVRREKISERMK LQDL
Sbjct: 234 ---KRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 290
Query: 398 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQS 454
VPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKL++VN RLDFN++ LL+KD+ S
Sbjct: 291 VPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPS 347
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 119/173 (68%), Gaps = 11/173 (6%)
Query: 345 GKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
+ K S+ ++ K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+
Sbjct: 214 AETSKDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 273
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGF 464
TGKA MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFNI+ L+AK+ +G
Sbjct: 274 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNLIAKETFPPCPTNFPAIGL 333
Query: 465 SPDMP----LVYPPVHQSQAGLMHGALP-------GMGNPSDILRRTINSQLT 506
S DM L + PV Q Q L G+ NP +RRTI++ ++
Sbjct: 334 SSDMTNPAYLQFNPVQQQQQQQQQQQLVTCCGLDMGINNPDMGIRRTISAPVS 386
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 136/326 (41%), Positives = 176/326 (53%), Gaps = 73/326 (22%)
Query: 133 LPNAPGMFPQ-SLSQFPADSAFIERAARFSSFSG-GNFCDMMNTFGTPE--PTGLYSRGR 188
LP + P SL QF AD F +RAAR S F G + FG P+ P G
Sbjct: 92 LPTLENLMPMGSLDQFLADPGFAQRAARLSGFDARGGYG---AQFGLPDDGPVG------ 142
Query: 189 GMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVE--HGASNGSTLKNERKGE 246
LK L G S +++ +V++ + ++ + GAS+G N RK
Sbjct: 143 -------------ALKELELG-SARDDSSVSDPASASAGAGMALKGASDG----NARK-- 182
Query: 247 SLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQD 306
++ G S G +A S +D AK S+ KR ++
Sbjct: 183 ---------RKAAGGSKGKGKDASVSTTSAKDL-----------LAKEDSASKRCKS--- 219
Query: 307 IEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVR 366
+ + + G+AA+ ++EN K KQGK G+ P +++IHVR
Sbjct: 220 MSMEDGEENSGKGKAAQSSSENGGK--------------KQGKDGASKLPEPPKDFIHVR 265
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARRG+AT+SHSLAERVRREKIS+RMK LQDLVPGC+KV GKAVMLDEIINYVQSLQRQVE
Sbjct: 266 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 325
Query: 427 FLSMKLATVNPRLDF-NIEELLAKDV 451
FLSMKLATVNP+LDF N+ LLAKD+
Sbjct: 326 FLSMKLATVNPQLDFNNLPNLLAKDM 351
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 136/326 (41%), Positives = 176/326 (53%), Gaps = 73/326 (22%)
Query: 133 LPNAPGMFPQ-SLSQFPADSAFIERAARFSSFSG-GNFCDMMNTFGTPE--PTGLYSRGR 188
LP + P SL QF AD F +RAAR S F G + FG P+ P G
Sbjct: 92 LPTLENLMPMDSLDQFLADPGFAQRAARLSGFDARGGYG---AQFGLPDDGPVG------ 142
Query: 189 GMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEVSKDASLSVE--HGASNGSTLKNERKGE 246
LK L G S +++ +V++ + ++ + GAS+G N RK
Sbjct: 143 -------------ALKELELG-SARDDSSVSDPASASAGAGMALKGASDG----NARK-- 182
Query: 247 SLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQD 306
++ G S G +A S +D AK S+ KR ++
Sbjct: 183 ---------RKAAGGSKGKGKDASVSTTSAKDL-----------LAKEDSASKRCKS--- 219
Query: 307 IEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVR 366
+ + + G+AA+ ++EN K KQGK G+ P +++IHVR
Sbjct: 220 MSMEDGEENSGKGKAAQSSSENGGK--------------KQGKDGASKLPEPPKDFIHVR 265
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARRG+AT+SHSLAERVRREKIS+RMK LQDLVPGC+KV GKAVMLDEIINYVQSLQRQVE
Sbjct: 266 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 325
Query: 427 FLSMKLATVNPRLDF-NIEELLAKDV 451
FLSMKLATVNP+LDF N+ LLAKD+
Sbjct: 326 FLSMKLATVNPQLDFNNLPNLLAKDM 351
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 106/142 (74%), Gaps = 2/142 (1%)
Query: 318 SGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHS 377
S E + EN KG S + KQGK G+ P ++YIH RARRG+AT+SHS
Sbjct: 205 SAEESNGAEENSGKGKAAAQSNSDNGGKKQGKDGASKPPEPPKDYIHFRARRGEATDSHS 264
Query: 378 LAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 437
LAERVRREKIS+RMK LQDLVPGC+KV GKAVMLDEIINYVQSLQRQVEFLSMKLATVNP
Sbjct: 265 LAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 324
Query: 438 RLDF-NIEELLAKDVLQSRAGP 458
+LDF N+ LL KD+ QS GP
Sbjct: 325 QLDFNNLPNLLPKDMHQS-CGP 345
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/99 (84%), Positives = 93/99 (93%), Gaps = 1/99 (1%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
PK++YIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY
Sbjct: 66 PKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 125
Query: 418 VQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRA 456
VQSLQRQ+EFLSMKLA VNPRLD+ ++L KD+LQ R+
Sbjct: 126 VQSLQRQIEFLSMKLAAVNPRLDYGF-DVLGKDLLQLRS 163
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/145 (64%), Positives = 109/145 (75%), Gaps = 6/145 (4%)
Query: 311 QAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQT-SDPPKEEYIHVRARR 369
+AK Q+S + E + K D P K K G +T S P ++YIHVRARR
Sbjct: 208 KAKSKQNSPSTVSPSKEIEEKEDSDP-----KRCKKSEDNGDKTKSIDPYKDYIHVRARR 262
Query: 370 GQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
GQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLS
Sbjct: 263 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 322
Query: 430 MKLATVNPRLDFNIEELLAKDVLQS 454
MKL++VN RLDFN++ LL+KD+ S
Sbjct: 323 MKLSSVNTRLDFNMDALLSKDIFPS 347
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/316 (40%), Positives = 174/316 (55%), Gaps = 52/316 (16%)
Query: 143 SLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNG 202
++++F +D F RAA+FS +F + G L R P + G
Sbjct: 112 TVAEFSSDPGFAARAAKFSCIGSRSFNGRGSQLGLNNNAELTQSQR----SPSLMENGML 167
Query: 203 LKSLSGGQSQK---NEMNVAEVSKDASLSVEHGASNGSTLKNERKGESLVNSHGEAKQGV 259
L +S S K ++M +++++S + S N RK ++ +S G+AK+ V
Sbjct: 168 LPRVSSSPSLKLLGSQMEGTNSQEESTISEQK----PSPCVNSRKRKA--SSRGKAKETV 221
Query: 260 GASGGDSD-EAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSS 318
++ D EA + +P+ EG +++NG + +K G SS
Sbjct: 222 NSTNPPMDAEASEDQNAKRGKPNEDEG--------------KEKNGSVKAEEDSKAGTSS 267
Query: 319 GEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSL 378
G GD KQ S+ +PPK +YIHVRARRGQAT+SHSL
Sbjct: 268 G------------GDE-----------KQNMSSSKPPEPPK-DYIHVRARRGQATDSHSL 303
Query: 379 AERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR 438
AERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYV+SLQRQVEFLSMKL++VN R
Sbjct: 304 AERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQVEFLSMKLSSVNTR 363
Query: 439 LDFNIEELLAKDVLQS 454
LDF+ E L++KD+ QS
Sbjct: 364 LDFSTESLISKDIFQS 379
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/149 (63%), Positives = 113/149 (75%), Gaps = 2/149 (1%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+KVTGKA MLDEIINYV
Sbjct: 179 KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYV 238
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQS 478
QSLQRQVEFLSMKLA VNPRLD +I++L KDV + A +G S + P Q
Sbjct: 239 QSLQRQVEFLSMKLAAVNPRLDLSIDDLFDKDVFSTCATNFPNIGISSTSDISNPAYLQF 298
Query: 479 QAGLMHGALPGMGNPSDI-LRRTINSQLT 506
+ + G+ +PSD+ LRRTI++ ++
Sbjct: 299 NSPQQIFSYDGL-DPSDMGLRRTISAPVS 326
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 121/182 (66%), Gaps = 9/182 (4%)
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
Q K+ S D KE Y+H+RA+RGQATNSHSLAER+RR+KISERMK LQDLVPGC+K+TG
Sbjct: 120 QSKEDSSDGDGTKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITG 179
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSP 466
KAVMLDEIINYVQSLQRQVEFLSMKLATVNP L F+IE++L+K ++ S+ LGF
Sbjct: 180 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQILSKQMMLSQ---DRHLGFYG 236
Query: 467 DMPLVYPPVHQSQAGLMH-GALPGMGNPSDILRRTIN-----SQLTPMTGGFKEPSQVSF 520
P + G+MH + NP L TI+ +Q+ M + ++F
Sbjct: 237 ADPGASALIAHFNQGMMHPDMICNASNPVGALHGTIHDISTMNQMPEMWETLQNIPHMNF 296
Query: 521 YP 522
P
Sbjct: 297 NP 298
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 116/167 (69%), Gaps = 9/167 (5%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDL+PGC+KV GKA MLDEIINYV
Sbjct: 186 KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYV 245
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVH-- 476
QSLQRQVEFLSMKLA VNPRLDFNI+EL AK+V S A +G DM + P +
Sbjct: 246 QSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEVFPSCAQSFPNIGIPSDMSISNNPSYLQ 305
Query: 477 ----QSQAGLMHGALPGMG-NPSDILRRT--INSQLTPMTGGFKEPS 516
Q G + MG +P ++ RT I++ P+ F + S
Sbjct: 306 FNSAQQLVSCCGGLINSMGISPPNMGLRTNIISTSTVPLPETFLDSS 352
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 117/158 (74%), Gaps = 3/158 (1%)
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
K S+ ++ K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA
Sbjct: 221 KDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 280
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDM 468
MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFN + L A++ + + T+G S DM
Sbjct: 281 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNFDNLFAREAFPACSVNFPTIGMSSDM 340
Query: 469 P-LVYPPVHQSQAGLMHGALPGMG-NPSDI-LRRTINS 503
Y + +Q L+ MG +P D+ L+RT +S
Sbjct: 341 TNPAYLQFNPAQQQLVTCCGLDMGTDPPDMGLKRTTSS 378
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/156 (57%), Positives = 114/156 (73%), Gaps = 3/156 (1%)
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
Q K+ S D KE+Y+H+RA+RGQATNSHSLAER+RR+KISERMK LQDLVPGCSK+TG
Sbjct: 128 QSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITG 187
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSP 466
KAVMLDEIINYVQSLQRQVEFLSMKLATVNP L F+IE++L+K ++ S+ + G P
Sbjct: 188 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQILSKQMMLSQDRHLAFYGADP 247
Query: 467 DMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTIN 502
+ H +Q + + + NP+ +L T +
Sbjct: 248 GSSTL---AHFNQGIMQPDMMCNVSNPAGVLHGTFH 280
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/156 (57%), Positives = 114/156 (73%), Gaps = 3/156 (1%)
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
Q K+ S D KE+Y+H+RA+RGQATNSHSLAER+RR+KISERMK LQDLVPGCSK+TG
Sbjct: 122 QSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITG 181
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSP 466
KAVMLDEIINYVQSLQRQVEFLSMKLATVNP L F+IE++L+K ++ S+ + G P
Sbjct: 182 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQILSKQMMLSQDRHLAFYGADP 241
Query: 467 DMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTIN 502
+ H +Q + + + NP+ +L T +
Sbjct: 242 GSSTL---AHFNQGIMQPDMMCNVSNPAGVLHGTFH 274
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 147/243 (60%), Gaps = 22/243 (9%)
Query: 280 PSAVEGTGGEP-SAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSS 338
P+ VE E S K S KKRK + A+ D+ + + K S
Sbjct: 74 PTLVEAKANEFFSIKKESYKKRKSDKPHNPKIVAENDSKDKRIKVDSEDGESNITGKISI 133
Query: 339 TGNKSAGKQGKQG-------SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERM 391
NK+A K +G S+ ++ K +YIHVRARRGQAT+SHSLAERVRREKISERM
Sbjct: 134 KDNKTATKSKNRGTCANSSNSKENEDQKLDYIHVRARRGQATDSHSLAERVRREKISERM 193
Query: 392 KFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
K+LQDLVPGC+K+TGKA MLDEIINYVQSLQRQVEFLSMKLATVNP L+FN ++L K V
Sbjct: 194 KYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLATVNPALEFNSDDLFDKVV 253
Query: 452 LQSRAGPSSTLGFSPDMPLVYPPVHQS-----QAGLMHGAL-PGMG-NPSDI-LRRTINS 503
PS F P + L P + Q + +G L GM NPSD+ LRRTI++
Sbjct: 254 F-----PSCDSTF-PAINLTNPATYLQFNSPPQQMVSYGGLDTGMNMNPSDVGLRRTISA 307
Query: 504 QLT 506
++
Sbjct: 308 PVS 310
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 114/160 (71%), Gaps = 4/160 (2%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K++YIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKAVMLDEIINYV
Sbjct: 116 KQDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYV 175
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIE-ELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQ 477
Q+LQ QVEFLSMKLA VNP+LD N+E L +DVLQ S + F+PD ++Q
Sbjct: 176 QALQCQVEFLSMKLAAVNPQLDCNVEGGYLTRDVLQPHCSSISKM-FAPDTTAAASQINQ 234
Query: 478 SQAG-LMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPS 516
Q L HG +R +++Q T M G+ +P+
Sbjct: 235 LQKTPLQHGLQCRADRQELAIRGMMDTQFTCM-NGYADPT 273
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 134/214 (62%), Gaps = 20/214 (9%)
Query: 284 EGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKS 343
+G G + AK L+S + + ++ + + + G+SS E ++ +S N
Sbjct: 226 DGNGKKRRAKSLTSAENSKEPEEAKAKRCRLGESS--------EIDDDDNNDETSDSNSK 277
Query: 344 AGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
GK+ D + YIHVRARRGQAT+SHSLAERVRREKI++RMKFLQDLVP C+K
Sbjct: 278 KGKEKNSNVSQKD---DNYIHVRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNK 334
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLG 463
VTGKAVMLDEIINYVQSLQ QVEFLSMKLATVNP+LDFNI+ AK++ +G S+ G
Sbjct: 335 VTGKAVMLDEIINYVQSLQHQVEFLSMKLATVNPKLDFNIDNFFAKEM----SGSFSSKG 390
Query: 464 FSPDMPLVYPPVHQ-SQAGLMHGALPGMGNPSDI 496
SP Y + Q QA L PG PS +
Sbjct: 391 MSP----TYFHLDQLKQASLQTVPSPGSDIPSTM 420
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/167 (59%), Positives = 117/167 (70%), Gaps = 19/167 (11%)
Query: 346 KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 405
K+ +GS+ + K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+
Sbjct: 125 KENSKGSEIQNH-KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIA 183
Query: 406 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV-------LQSRAGP 458
GKA MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFNI+EL AK+V +QS
Sbjct: 184 GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEVFTQNFQMMQSEMSN 243
Query: 459 SSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGN-PSDI-LRRTINS 503
+ L F+ Q Q G + MG P +I +RR IN+
Sbjct: 244 PAYLQFNS---------AQQQVSCCGGLINNMGILPPEIGVRRNINA 281
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 102/124 (82%), Gaps = 4/124 (3%)
Query: 328 NQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKI 387
+Q + HK ++S K+ SQ + PKE+YIH+RARRGQATNSHSLAERVRREKI
Sbjct: 15 DQSQKKHK----NDQSKETMNKESSQNEEEPKEKYIHMRARRGQATNSHSLAERVRREKI 70
Query: 388 SERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELL 447
SERM+ LQ+LVPGC+K+TGKA MLDEIINY+QSLQ+QVEFLSMKLATVNP ++ +I+ +L
Sbjct: 71 SERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQVEFLSMKLATVNPDINIDIDRIL 130
Query: 448 AKDV 451
AKDV
Sbjct: 131 AKDV 134
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 114/174 (65%), Gaps = 25/174 (14%)
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
K+ S+ S+ K +YIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+K+TGKA
Sbjct: 233 KENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKA 292
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVL---------------- 452
MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFN+++L K+V
Sbjct: 293 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPSCTAANFPSVGGMS 352
Query: 453 QSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLT 506
PSS L F+P+ Q G G+ LRRTI++ ++
Sbjct: 353 SEMTDPSSYLQFNPN---------NQQMDSCCGLEMGINTSHVALRRTISAPVS 397
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/167 (58%), Positives = 115/167 (68%), Gaps = 9/167 (5%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDL+PGC+KV GKA MLDEIINYV
Sbjct: 186 KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYV 245
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVH-- 476
QSLQRQVEFLSMKLA VNP LDFNI+EL AK+V S A +G DM + P +
Sbjct: 246 QSLQRQVEFLSMKLAAVNPGLDFNIDELFAKEVFPSCAQSFPNIGIPSDMSISNNPSYLQ 305
Query: 477 ----QSQAGLMHGALPGMG-NPSDILRRT--INSQLTPMTGGFKEPS 516
Q G + MG +P ++ RT I++ P+ F + S
Sbjct: 306 FNSAQQLVSCCGGLINSMGISPPNMGLRTNIISTSTVPLPETFLDSS 352
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 151/387 (39%), Positives = 196/387 (50%), Gaps = 88/387 (22%)
Query: 150 DSAFIERAARFSSFSGGNFC--DMMNTFGTPEPTGLYSRGRGMMQGPQEVFAGNGLKSLS 207
D F ERAARFS F +F + N FG S G + V + LK+L
Sbjct: 59 DPGFAERAARFSCFGSRSFNGRQLTNEFGNYR--SHLSIGNEKL---SRVSSSPSLKALG 113
Query: 208 GGQSQKNEMNVAEVSKDASLSVEHGAS---NGSTLKNERKGESLVNSHGEAKQGVGASGG 264
EMN+ E K+ S S E +S T+ N RK +++ + + K+ V
Sbjct: 114 S------EMNLQE-HKNNSSSQEDESSLSNQDKTITNPRKRKAI--TKAKLKEPV----- 159
Query: 265 DSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKD 324
VE T + S K L + +RK N + E D K ++S E
Sbjct: 160 ------------------VEATPEKESPKKLKTVERKENVK-TEEDLKKNDENSAE---- 196
Query: 325 NTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRR 384
E Q K + KP + PK +YIHVRARRGQAT+SHSLAERVRR
Sbjct: 197 --ERQTKANSKP------------------PEAPK-DYIHVRARRGQATDSHSLAERVRR 235
Query: 385 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN-PRLDFNI 443
EKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQ QVEFLSMKLA+VN R+DFN+
Sbjct: 236 EKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLASVNTTRVDFNV 295
Query: 444 EELL-AKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQA--GLMHGALPGMG----NPSD- 495
+ L+ +K + QS G S P + P + + G + +LP +P D
Sbjct: 296 DSLISSKQMYQS--------GTSLTHPQISPIDSSTSSFYGHQNSSLPTTSHCSVDPIDS 347
Query: 496 ILRRTINSQLTPMTGGFKEPSQVSFYP 522
+L + + QL P+ + PSQ YP
Sbjct: 348 VLCQNLPIQLPPLNSFLQNPSQ---YP 371
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 114/174 (65%), Gaps = 25/174 (14%)
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
K+ S+ S+ K +YIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+K+TGKA
Sbjct: 233 KENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKA 292
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVL---------------- 452
MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFN+++L K+V
Sbjct: 293 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPSCTAANFPSVGGMS 352
Query: 453 QSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNPSDILRRTINSQLT 506
PSS L F+P+ Q G G+ LRRTI++ ++
Sbjct: 353 SEMTDPSSYLQFNPN---------NQQMDSCCGLEMGINTSHVALRRTISAPVS 397
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/348 (38%), Positives = 179/348 (51%), Gaps = 45/348 (12%)
Query: 127 IKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSR 186
+GG+ L P +L+Q +DSAF+ERAA+FS TFGT TG Y
Sbjct: 160 FRGGLALHGVPSEV-DNLAQITSDSAFVERAAKFS------------TFGTR--TGEYVP 204
Query: 187 GRGMMQGPQEVFAGNGLKSLSGGQSQKNEMNVAEV--SKDASLSVEHGASNGSTLKNERK 244
M+Q P F KS+ G ++++ + K + L GAS +
Sbjct: 205 E--MLQRPAAGFVAATTKSVPGDVREESKCIAIDTIPGKQSVLEAVEGASKVTV------ 256
Query: 245 GESLVNSHGEAKQGVGASGGDSDEAEFS-GGGGQDEPSAVEGTGGEPSAKGLSSKKRKRN 303
+++ N EA + S AE G G+ P + P +S+ +++
Sbjct: 257 -DAISNIKVEAA-AFHENTNISSCAELQPGSQGEISPDTISPARSTPPQDEPASRNKRKK 314
Query: 304 GQDIEFDQA------------KGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQG 351
I+ D A K + GE K + + +R S + Q +
Sbjct: 315 PSTIDNDLASPDPKVGDVENSKAKRCKGEDTKSDCKGERSSSEISSESAGSPKVPQKENN 374
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
+ + K++YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC KVTGKAVML
Sbjct: 375 QKAKEFSKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVML 434
Query: 412 DEIINYVQSLQRQVEFLSMKLATVNP----RLDFNIEELLAKDVLQSR 455
DEIINYVQSLQRQVE LSMK+A+VNP RL L +D++QS+
Sbjct: 435 DEIINYVQSLQRQVESLSMKVASVNPTHSGRLTLE-SRLSNEDIIQSQ 481
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/268 (40%), Positives = 149/268 (55%), Gaps = 35/268 (13%)
Query: 256 KQGVGASGGDSDEAEFSGGGGQ------DEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEF 309
+Q SG + +E S GG + D+ + T PS K ++ + + +
Sbjct: 116 EQKCNTSGEECSSSEQSTGGRKRRTLPNDKARFHDSTFTSPSEKNTENESKSKRPK---- 171
Query: 310 DQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARR 369
S EA K+N +++ + + + + +Q +Q ++ +PPK+ YIHVRARR
Sbjct: 172 --------SAEAMKENDDSKSDAEQRTHTGRPEVNPRQSEQSAKPPEPPKD-YIHVRARR 222
Query: 370 GQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
GQAT+ HSLAERVRREKI ERMK LQDLVPGC+K+TGKAVM+DEIINYVQSLQ QVEFLS
Sbjct: 223 GQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQVEFLS 282
Query: 430 MKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALP- 488
MKL VNP+L N+E LA+D+L+ S + YP HQ + M
Sbjct: 283 MKLEAVNPKLACNMEGFLARDMLEP----------SFNTAKAYPQFHQPEWLAMQVGTSC 332
Query: 489 -----GMGNPSDILRRTINSQLTPMTGG 511
MGN + R I ++ +P+ G
Sbjct: 333 EMEEQCMGNARQVALRRIMNENSPLIEG 360
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/97 (86%), Positives = 91/97 (93%), Gaps = 2/97 (2%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
D PK++YIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII
Sbjct: 67 DLPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 126
Query: 416 NYVQSLQRQVEFLSMKLATVN-PRLDFNIEELLAKDV 451
NYVQSLQRQ+EFLSMKLA VN PRLD N +LL+KD+
Sbjct: 127 NYVQSLQRQIEFLSMKLAAVNPPRLDHNY-DLLSKDM 162
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/114 (74%), Positives = 99/114 (86%), Gaps = 2/114 (1%)
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
+GK S+ + P ++Y+HVRARRGQAT+SHSLAERVRREKIS+RMK LQDLVPGC+KV G
Sbjct: 156 KGKNSSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVG 215
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDVLQSRAGPS 459
KA+MLDEIINYVQSLQ+QVEFLSMKLATVNP+LDF N+ LL KD+ QS GPS
Sbjct: 216 KALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFGNLSTLLQKDMFQS-CGPS 268
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/114 (74%), Positives = 99/114 (86%), Gaps = 2/114 (1%)
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
+GK S+ + P ++Y+HVRARRGQAT+SHSLAERVRREKIS+RMK LQDLVPGC+KV G
Sbjct: 156 KGKNSSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVG 215
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDVLQSRAGPS 459
KA+MLDEIINYVQSLQ+QVEFLSMKLATVNP+LDF N+ LL KD+ QS GPS
Sbjct: 216 KALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFGNLSTLLQKDMFQS-CGPS 268
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/119 (73%), Positives = 100/119 (84%), Gaps = 3/119 (2%)
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
+GK +PPK+ Y+HVRARRGQAT+SHSLAERVRREKIS+RMKFLQDLVPGC+KV G
Sbjct: 140 KGKTAKPAVEPPKD-YVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVG 198
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDVLQSRAGPSSTLGF 464
KA+MLDEIINYVQSLQ+QVEFLSMKLATVNP+LDF N+ LL KD+ Q GPS+ F
Sbjct: 199 KALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKDMYQP-CGPSANSVF 256
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/119 (73%), Positives = 100/119 (84%), Gaps = 3/119 (2%)
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
+GK +PPK+ Y+HVRARRGQAT+SHSLAERVRREKIS+RMKFLQDLVPGC+KV G
Sbjct: 140 KGKTAKPAVEPPKD-YVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVG 198
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDVLQSRAGPSSTLGF 464
KA+MLDEIINYVQSLQ+QVEFLSMKLATVNP+LDF N+ LL KD+ Q GPS+ F
Sbjct: 199 KALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKDMYQP-CGPSANSVF 256
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/119 (73%), Positives = 100/119 (84%), Gaps = 3/119 (2%)
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
+GK +PPK+ Y+HVRARRGQAT+SHSLAERVRREKIS+RMKFLQDLVPGC+KV G
Sbjct: 140 KGKTAKPAVEPPKD-YVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVG 198
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDVLQSRAGPSSTLGF 464
KA+MLDEIINYVQSLQ+QVEFLSMKLATVNP+LDF N+ LL KD+ Q GPS+ F
Sbjct: 199 KALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKDMYQP-CGPSANSVF 256
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 142/231 (61%), Gaps = 34/231 (14%)
Query: 301 KRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKE 360
KR +++E KG + +G ++N EN + KQ K S+ + PK+
Sbjct: 204 KRKSEEVEDSGKKGKRENGRGFEENDEN-------------SAEEKQTKANSKPPEAPKD 250
Query: 361 EYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQS 420
YIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQS
Sbjct: 251 -YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 309
Query: 421 LQRQVEFLSMKLATVN-PRLDFNIEELL-AKDVLQSRAGPSSTLGFSPDMPLVYPPVHQS 478
LQ QVEFLSMKLA+VN R+DFN++ L+ +K + QS G S P + P +
Sbjct: 310 LQHQVEFLSMKLASVNTTRVDFNVDSLISSKQMYQS--------GTSLTHPQISPIDSSA 361
Query: 479 QA--GLMHGALPGMG----NPSD-ILRRTINSQLTPMTGGFKEPSQVSFYP 522
+ G + +LP +P D +L + + QL P+ + PSQ YP
Sbjct: 362 SSFYGHQNSSLPTTSHCSVDPIDSVLCQNLPIQLPPLNSFLQNPSQ---YP 409
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/119 (73%), Positives = 100/119 (84%), Gaps = 3/119 (2%)
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
+GK +PPK+ Y+HVRARRGQAT+SHSLAERVRREKIS+RMKFLQDLVPGC+KV G
Sbjct: 140 KGKTAKPAVEPPKD-YVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVG 198
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDVLQSRAGPSSTLGF 464
KA+MLDEIINYVQSLQ+QVEFLSMKLATVNP+LDF N+ LL KD+ Q GPS+ F
Sbjct: 199 KALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKDMHQP-CGPSANSVF 256
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/100 (79%), Positives = 89/100 (89%)
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
G + + P ++YIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGCSKVTGKAVM
Sbjct: 225 GKEVAAEPSKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVM 284
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
LDEIINYVQSLQRQVEFLSMKL+TVNPRL +++ + KD
Sbjct: 285 LDEIINYVQSLQRQVEFLSMKLSTVNPRLKLDVDSCIPKD 324
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/164 (57%), Positives = 115/164 (70%), Gaps = 20/164 (12%)
Query: 319 GEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSD----------------PPKEEY 362
G+ + + + R GD + + K +Q + GS D PPK+ Y
Sbjct: 129 GDQKELDAKRCRTGDAEKKTAPVKPKAEQARSGSSVEDYGEPKKGKGKNAKPVEPPKD-Y 187
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
+HVRARRGQAT+SHSLAERVRRE+IS+RMKFLQDLVPGC+KV GKA+MLDEIINYVQSLQ
Sbjct: 188 VHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQ 247
Query: 423 RQVEFLSMKLATVNPRLDF-NIEELLAKDVLQSRAGPSSTLGFS 465
RQVEFLSMKLATVNP LDF N+ LL KD+ Q+ GPS++ FS
Sbjct: 248 RQVEFLSMKLATVNP-LDFSNLPTLLHKDMYQA-CGPSASSVFS 289
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 122/190 (64%), Gaps = 17/190 (8%)
Query: 270 EFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKD----- 324
E SGGG D+P +E +GG +KR+ + E +A G A D
Sbjct: 61 EASGGG--DDPMVLERSGG---------RKRRDAATEDEGGKAVSTSGGGNVANDCDGKR 109
Query: 325 -NTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVR 383
T R + + S+GK +Q Q++DPPK+++IHVRARRGQAT+SHSLAER R
Sbjct: 110 LKTSGSRDENRDSKTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERAR 169
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI 443
REKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ I
Sbjct: 170 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGI 229
Query: 444 EELLAKDVLQ 453
E +KD Q
Sbjct: 230 EGFPSKDFGQ 239
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 122/190 (64%), Gaps = 17/190 (8%)
Query: 270 EFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKD----- 324
E SGGG D+P +E +GG +KR+ + E +A G A D
Sbjct: 61 EASGGG--DDPMVLERSGG---------RKRRDAATEDEGGKAVSTSGGGNVANDCDGKR 109
Query: 325 -NTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVR 383
T R + + S+GK +Q Q++DPPK+++IHVRARRGQAT+SHSLAER R
Sbjct: 110 LKTSGSRDENRDSKTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERAR 169
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI 443
REKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ I
Sbjct: 170 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGI 229
Query: 444 EELLAKDVLQ 453
E +KD Q
Sbjct: 230 EGFPSKDFGQ 239
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/115 (71%), Positives = 96/115 (83%), Gaps = 1/115 (0%)
Query: 336 PSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ 395
P+ +G +GK+ DP K+ YIHVRARRGQAT+SHSLAERVRREKISERMK LQ
Sbjct: 4 PAVSGELGGNGKGKEKEVAEDPHKD-YIHVRARRGQATDSHSLAERVRREKISERMKLLQ 62
Query: 396 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
DLVP C+KVTGKAVMLDEIINYVQSLQRQVEFLSMKL+TVNP+++F+++ L KD
Sbjct: 63 DLVPSCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQMEFDVDNFLPKD 117
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 90/100 (90%), Gaps = 5/100 (5%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K++YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+KVTGKAVMLDEIINYV
Sbjct: 48 KQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYV 107
Query: 419 QSLQRQVEFLSMKLATVNP-----RLDFNIEELLAKDVLQ 453
QSLQRQVE LSMKLA+VNP RLD+N E L KD+LQ
Sbjct: 108 QSLQRQVESLSMKLASVNPGPSTARLDYNFETALNKDMLQ 147
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/117 (70%), Positives = 97/117 (82%), Gaps = 4/117 (3%)
Query: 354 TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
T + K +YIHVRARRGQAT+SHS+AERVRREKISERMKFLQDLVPGC K+TGKA MLDE
Sbjct: 161 TKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDE 220
Query: 414 IINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPL 470
IINYVQSLQRQ+EFLSMKLA VNPR DF+++++ AK+V A T+ SP+M L
Sbjct: 221 IINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV----ASTPMTVVPSPEMVL 273
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/117 (70%), Positives = 97/117 (82%), Gaps = 4/117 (3%)
Query: 354 TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
T + K +YIHVRARRGQAT+SHS+AERVRREKISERMKFLQDLVPGC K+TGKA MLDE
Sbjct: 161 TKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDE 220
Query: 414 IINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPL 470
IINYVQSLQRQ+EFLSMKLA VNPR DF+++++ AK+V A T+ SP+M L
Sbjct: 221 IINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV----ASTPMTVVPSPEMVL 273
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/117 (70%), Positives = 97/117 (82%), Gaps = 4/117 (3%)
Query: 354 TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
T + K +YIHVRARRGQAT+SHS+AERVRREKISERMKFLQDLVPGC K+TGKA MLDE
Sbjct: 161 TKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDE 220
Query: 414 IINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPL 470
IINYVQSLQRQ+EFLSMKLA VNPR DF+++++ AK+V A T+ SP+M L
Sbjct: 221 IINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV----ASTPMTVVPSPEMVL 273
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/117 (70%), Positives = 97/117 (82%), Gaps = 4/117 (3%)
Query: 354 TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
T + K +YIHVRARRGQAT+SHS+AERVRREKISERMKFLQDLVPGC K+TGKA MLDE
Sbjct: 161 TKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDE 220
Query: 414 IINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPL 470
IINYVQSLQRQ+EFLSMKLA VNPR DF+++++ AK+V A T+ SP+M L
Sbjct: 221 IINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV----ASTPMTVVPSPEMVL 273
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/111 (76%), Positives = 97/111 (87%), Gaps = 3/111 (2%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
+PPK+ Y+HVRARRGQAT+SHSLAERVRREKIS+RMKFLQDLVPGC+KV GKA+MLDEII
Sbjct: 148 EPPKD-YVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEII 206
Query: 416 NYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDVLQSRA-GPSSTLGF 464
NYVQSLQ+QVEFLSMKLATVNP LDF N+ LL KD+ Q GPS++ F
Sbjct: 207 NYVQSLQQQVEFLSMKLATVNPELDFSNLSTLLHKDMYQQPCGGPSASSVF 257
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/111 (76%), Positives = 97/111 (87%), Gaps = 3/111 (2%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
+PPK+ Y+HVRARRGQAT+SHSLAERVRREKIS+RMKFLQDLVPGC+KV GKA+MLDEII
Sbjct: 148 EPPKD-YVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEII 206
Query: 416 NYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDVLQSRA-GPSSTLGF 464
NYVQSLQ+QVEFLSMKLATVNP LDF N+ LL KD+ Q GPS++ F
Sbjct: 207 NYVQSLQQQVEFLSMKLATVNPELDFSNLSTLLHKDMYQQPCGGPSASSVF 257
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 92/98 (93%), Gaps = 2/98 (2%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
+PPK+ YIHVRARRGQAT+SHSLAERVRREKI ERMK LQDLVPGC+KVTGKA+MLDEII
Sbjct: 293 EPPKD-YIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEII 351
Query: 416 NYVQSLQRQVEFLSMKLATVN-PRLDFNIEELLAKDVL 452
NYVQSLQRQVEFLSMKL++VN RLDFN++ L++KDV+
Sbjct: 352 NYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVM 389
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 92/98 (93%), Gaps = 2/98 (2%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
+PPK+ YIHVRARRGQAT+SHSLAERVRREKI ERMK LQDLVPGC+KVTGKA+MLDEII
Sbjct: 291 EPPKD-YIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEII 349
Query: 416 NYVQSLQRQVEFLSMKLATVN-PRLDFNIEELLAKDVL 452
NYVQSLQRQVEFLSMKL++VN RLDFN++ L++KDV+
Sbjct: 350 NYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVM 387
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 142/247 (57%), Gaps = 29/247 (11%)
Query: 266 SDEAEFSGGGGQDEPSAVEGTGGE-PSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKD 324
SD + + S G G E P++ L++ K +G++ +KGG+ S +
Sbjct: 104 SDRVHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGEN---GGSKGGKRSKQDVAG 160
Query: 325 NTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRR 384
+++N G K S G+ K ++ + PK+ YIHVRARRGQAT+SHSLAER RR
Sbjct: 161 SSKN---GVEKCDSKGD------NKDDAKPPEAPKD-YIHVRARRGQATDSHSLAERARR 210
Query: 385 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
EKISERM LQDLVPGC+++TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR++FN
Sbjct: 211 EKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNAN 270
Query: 445 ELLAKDVLQ---------------SRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPG 489
L+ +++Q + PS+ +MP S G +H PG
Sbjct: 271 ASLSTEMIQPGESLTQSLYAMACSEQRLPSAYYSLGKNMPRFSDTQFPSNDGFVHTETPG 330
Query: 490 MGNPSDI 496
+D+
Sbjct: 331 FWENNDL 337
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/111 (77%), Positives = 99/111 (89%), Gaps = 4/111 (3%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
+PPK+ Y+HVRARRGQAT+SHSLAERVRRE+IS+RMK LQDLVPGC+KV GKA+MLDEII
Sbjct: 196 EPPKD-YVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 254
Query: 416 NYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDVLQSRAGPSSTLGFS 465
NYVQSLQRQVEFLSMKLATVNP LDF N+ LL KD+LQ+ GPS++ FS
Sbjct: 255 NYVQSLQRQVEFLSMKLATVNP-LDFSNLPTLLQKDMLQA-CGPSASSVFS 303
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 139/248 (56%), Gaps = 31/248 (12%)
Query: 266 SDEAEFSGGGGQDEPSAVEGTGGE-PSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAK- 323
SD + + S G G E P++ L++ K +G++ GG G+ +K
Sbjct: 107 SDRVHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGEN-------GGSKGGKRSKQ 159
Query: 324 DNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVR 383
D + + G K S G+ K ++ + PK+ YIHVRARRGQAT+SHSLAER R
Sbjct: 160 DEAGSSKNGVEKCDSKGD------NKDDAKPPEAPKD-YIHVRARRGQATDSHSLAERAR 212
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI 443
REKISERM LQDLVPGC+++TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR++FN
Sbjct: 213 REKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNA 272
Query: 444 EELLAKDVLQ---------------SRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALP 488
L+ +++Q + PS+ +MP S G + P
Sbjct: 273 NAALSTEMIQPGESLTQSLYAMACSEQRLPSAYYSLGKNMPRFSDTQFPSNDGFVQAETP 332
Query: 489 GMGNPSDI 496
G +D+
Sbjct: 333 GFWENNDL 340
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 118/172 (68%), Gaps = 12/172 (6%)
Query: 292 AKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTG----NKSAGKQ 347
A L+ R+R D D AKG +S +A N +GD+K TG N + +
Sbjct: 75 APNLNGGVRRRREDD---DSAKGVSTSNDANAMN-----EGDNKRLKTGGSNENHESKAE 126
Query: 348 GKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGK 407
G++ ++ ++PPK++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GK
Sbjct: 127 GEETAKPAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 186
Query: 408 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPS 459
A++LDEIINY+QSLQRQVEFLSMKL VN RL IE +K+ Q PS
Sbjct: 187 ALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLSPGIEGFPSKEFGQPPYDPS 238
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/97 (83%), Positives = 90/97 (92%), Gaps = 2/97 (2%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
+PPK+ Y+HVRARRGQAT+SHSLAERVRREKIS+RMKFLQDLVPGC+KV GKA+MLDEII
Sbjct: 148 EPPKD-YVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEII 206
Query: 416 NYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDV 451
NYVQSLQ+QVEFLSMKLATVNP LDF N+ LL KDV
Sbjct: 207 NYVQSLQQQVEFLSMKLATVNPELDFSNLSTLLHKDV 243
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 111/157 (70%), Gaps = 10/157 (6%)
Query: 298 KKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKG--------DHKPSS-TGNKSAGKQG 348
+KRK +G + +AK ++ T R + KP++ G + +GK
Sbjct: 181 RKRKASGTSSKQSKAKEAVTTAPPESRETAETRAKKCKLSTDEERKPAAGEGWRGSGKGK 240
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
+ + ++PPK+ YIHVRARRGQAT+SHSLAERVRREKI ERMK LQDLVPGCSKVTGKA
Sbjct: 241 ELVAADAEPPKD-YIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKA 299
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEE 445
VMLDEIINYVQSLQRQVEFLSMKL+TVNPRL+ ++
Sbjct: 300 VMLDEIINYVQSLQRQVEFLSMKLSTVNPRLELGADD 336
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/97 (83%), Positives = 90/97 (92%), Gaps = 2/97 (2%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
+PPK+ Y+HVRARRGQAT+SHSLAERVRREKIS+RMKFLQDLVPGC+KV GKA+MLDEII
Sbjct: 150 EPPKD-YVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEII 208
Query: 416 NYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDV 451
NYVQSLQ+QVEFLSMKLATVNP LDF N+ LL KDV
Sbjct: 209 NYVQSLQQQVEFLSMKLATVNPELDFSNLSTLLHKDV 245
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 154/301 (51%), Gaps = 46/301 (15%)
Query: 236 GSTLKNERKGESLVNS---------HGEAKQGVGASGG------DSDEAEFSGGGGQDEP 280
G+ L+ E ESL S G + GA GG D A ++GG G
Sbjct: 15 GAQLQQETAVESLCQSLMLDDVMLHDGRYRAICGAFGGYLQEWPDMSSACYAGGFGATPV 74
Query: 281 SAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTE-NQRKGDHKPSST 339
V G S G S KRK + + AKG + E +Q G KP
Sbjct: 75 QEVSNGGNSFSCSGGGSTKRKSDA----YLDAKGECKRPRGKQQVCELDQSSGRGKPEKA 130
Query: 340 GNKSAGKQGKQGSQTSDP-----PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFL 394
K+G +Q DP K +YIHVRARRGQAT+SHSLAERVRRE+ISERM++L
Sbjct: 131 KPAGTRKKGDVAAQKQDPRAAGGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYL 190
Query: 395 QDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI-EELLAKDVLQ 453
Q+LVPGC KVTGKA MLDEIINYVQSLQ+QVEFLSMK+A NP ++F+I E+L L
Sbjct: 191 QELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFDIVEDLFGGRRLG 250
Query: 454 SRAGPSSTLGFSPDMPLVYPPVHQS------QAGLMHG-ALPGMGNPSDILRRTINSQLT 506
P++ MP+ P+H Q MH A G G L +N+Q T
Sbjct: 251 QACSPAAA-----TMPM---PIHGQMDTSCLQMQQMHQPAAAGFG-----LEMVVNNQYT 297
Query: 507 P 507
P
Sbjct: 298 P 298
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/101 (76%), Positives = 90/101 (89%)
Query: 354 TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
T + K +YIHVRARRGQAT+SHS+AERVRREKISERMKFLQDLVPGC K+TGKA MLDE
Sbjct: 158 TKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDE 217
Query: 414 IINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQS 454
IINYVQSLQRQ+EFLSMKLA VNPR DF+++++ K+V+ S
Sbjct: 218 IINYVQSLQRQIEFLSMKLAVVNPRPDFDMDDIFDKEVIVS 258
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/111 (76%), Positives = 98/111 (88%), Gaps = 4/111 (3%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
+PPK+ Y+HVRARRGQAT+SHSLAERVRRE+IS+RMK LQDLVPGC+KV GKA+MLDEII
Sbjct: 196 EPPKD-YVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 254
Query: 416 NYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDVLQSRAGPSSTLGFS 465
NYVQSLQRQVEFLSMKLATVNP LDF N+ LL KD+ Q+ GPS++ FS
Sbjct: 255 NYVQSLQRQVEFLSMKLATVNP-LDFSNLPTLLQKDMFQA-CGPSASSVFS 303
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/111 (76%), Positives = 98/111 (88%), Gaps = 4/111 (3%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
+PPK+ Y+HVRARRGQAT+SHSLAERVRRE+IS+RMK LQDLVPGC+KV GKA+MLDEII
Sbjct: 196 EPPKD-YVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 254
Query: 416 NYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAKDVLQSRAGPSSTLGFS 465
NYVQSLQRQVEFLSMKLATVNP LDF N+ LL KD+ Q+ GPS++ FS
Sbjct: 255 NYVQSLQRQVEFLSMKLATVNP-LDFSNLPTLLQKDMFQA-CGPSASSVFS 303
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 116/147 (78%), Gaps = 9/147 (6%)
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
+D +EEY+HVRA+RGQATNSHSLAER RREKI+ERMK LQDLVPGC+K+TGKA+MLDEI
Sbjct: 115 ADASREEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEI 174
Query: 415 INYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPP 474
INYVQSLQRQVEFLSMKL+T++P L+ +++ +D+L S+ S+ LG SP + +P
Sbjct: 175 INYVQSLQRQVEFLSMKLSTISPELNSDLD---LQDILCSQDARSAFLGCSPQLSNAHPN 231
Query: 475 VHQ-SQAGL----MHGALPGMGNPSDI 496
+++ +Q L ++G++ + NP+D+
Sbjct: 232 LYRAAQQCLSPPGLYGSV-CVPNPADV 257
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/146 (62%), Positives = 109/146 (74%), Gaps = 12/146 (8%)
Query: 340 GNKSA-GKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLV 398
G K A GK K +D P +Y+HVRARRGQAT+SHSLAERVRREKI+ +MK LQDLV
Sbjct: 42 GRKQAKGKVSKSKQPAADEPPRDYVHVRARRGQATDSHSLAERVRREKITLKMKMLQDLV 101
Query: 399 PGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN-IEELLAKDVLQSRAG 457
PGC+KV GKA+MLDEIINYVQSLQ+QVEFLSMKL+TVNP+LDF+ + LL KD+ Q+ G
Sbjct: 102 PGCNKVIGKALMLDEIINYVQSLQQQVEFLSMKLSTVNPQLDFDTLSNLLHKDMNQA-LG 160
Query: 458 PSSTLGFSPDMPL-----VYPPVHQS 478
PS++ F PL VYP Q+
Sbjct: 161 PSASTVF----PLESAGTVYPLCDQA 182
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/136 (65%), Positives = 106/136 (77%), Gaps = 13/136 (9%)
Query: 335 KPSSTGNKSAGKQGKQ---------GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRRE 385
KP G+ S+ + G Q ++ +PPK+ Y+HVRARRGQAT+SHSLAERVRRE
Sbjct: 155 KPEQAGSDSSVEDGGQTQKPPGKGKNAKLVEPPKD-YVHVRARRGQATDSHSLAERVRRE 213
Query: 386 KISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF-NIE 444
+IS+RMK LQDLVPGC+KV GKA+MLDEIINYVQSLQRQVEFLSMKLATVNP LDF N+
Sbjct: 214 RISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNP-LDFSNLP 272
Query: 445 ELLAKDVLQSRAGPSS 460
LL KD+ Q+ GPS+
Sbjct: 273 TLLQKDMFQA-CGPSA 287
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/154 (60%), Positives = 107/154 (69%), Gaps = 21/154 (13%)
Query: 311 QAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRG 370
+AK + S +AA D GD G+ GK GK +PPK+ YIHVRARRG
Sbjct: 98 KAKKCKLSADAAGDEDTKPVAGD-----AGHGGNGK-GKVLDAAGEPPKD-YIHVRARRG 150
Query: 371 QATNSHSLAERVRREKISERMKFLQDLVPGCSK--------------VTGKAVMLDEIIN 416
QAT+SHSLAERVRREKISERMK LQDLVPGC+K VTGKAVMLDEIIN
Sbjct: 151 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIIN 210
Query: 417 YVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
YVQSLQRQVEFLSMKL+TVNP+LDF+++ + KD
Sbjct: 211 YVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKD 244
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 94/114 (82%), Gaps = 6/114 (5%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P ++YIHVRARRGQAT+SHSLAERVRRE+ISERMK LQ LVPGC+K+TGKA+MLDEIINY
Sbjct: 74 PAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINY 133
Query: 418 VQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV------LQSRAGPSSTLGFS 465
VQSLQRQVEFLSMKLAT+NP+LDF+ + +KD+ + P++T FS
Sbjct: 134 VQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDMSHMPVPAYPSSDPTTTTAFS 187
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/111 (71%), Positives = 94/111 (84%)
Query: 343 SAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCS 402
S+GK +Q Q++DPPK+++IHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+
Sbjct: 60 SSGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 119
Query: 403 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IE +KD Q
Sbjct: 120 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPSKDFGQ 170
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/101 (75%), Positives = 89/101 (88%)
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
S+ S PK +YIHVRARRGQAT+SHSLAER RREKIS++MK+LQDLVPGC+K+TGKA M
Sbjct: 176 ASKVSGSPKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGM 235
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
LDEIINYVQSLQRQVEFLS+KLAT+NPR DFN++ L K+
Sbjct: 236 LDEIINYVQSLQRQVEFLSLKLATMNPRTDFNLDTFLGKEF 276
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 89/100 (89%)
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
S+ S PK +YIHVRARRGQAT+SHSLAER RREKIS++MK+LQDLVPGC+K+TGKA M
Sbjct: 176 ASKVSGSPKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGM 235
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
LDEIINYVQSLQRQVEFLS+KLAT+NPR DFN++ L K+
Sbjct: 236 LDEIINYVQSLQRQVEFLSLKLATMNPRTDFNLDTFLGKE 275
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 113/167 (67%), Gaps = 16/167 (9%)
Query: 297 SKKRKRNGQDIEFDQAKGGQSS---------GEAAKDNTENQRKGDHKPSSTGNKSAGKQ 347
++K++R+ E + AKG ++ G+ + T KG+ G S+GK
Sbjct: 65 AQKKRRDASAEEEESAKGASTTNAVNEGGGVGDGKRVKTSESGKGE------GETSSGKL 118
Query: 348 GKQ-GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
+Q G S+PPK++YIHVRARRGQAT+SHSLAER RREKISERMK LQD+VPGC+KV G
Sbjct: 119 AEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIG 178
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
KA++LDEIINY+QSLQRQVEFLSMKL VN RL IE KD Q
Sbjct: 179 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLAPRIEVFPPKDFDQ 225
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 116/147 (78%), Gaps = 9/147 (6%)
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
+D +EEY+HVRA+RGQATNSHSLAER RREKI+ERMK LQDLVPGC+K+TGKA+MLDEI
Sbjct: 618 ADASREEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEI 677
Query: 415 INYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPP 474
INYVQSLQRQVEFLSMKL+T++P L+ +++ +D+L S+ S+ LG SP + +P
Sbjct: 678 INYVQSLQRQVEFLSMKLSTISPELNSDLD---LQDILCSQDARSAFLGCSPQLSNAHPN 734
Query: 475 VHQ-SQAGL----MHGALPGMGNPSDI 496
+++ +Q L ++G++ + NP+D+
Sbjct: 735 LYRAAQQCLSPPGLYGSV-CVPNPADV 760
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 127/203 (62%), Gaps = 22/203 (10%)
Query: 252 HGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQ 311
+G+A G+G G+ S G G+ + S E T E S G +KR+ + E +
Sbjct: 31 NGDASAGLGLRVGN-----LSAGFGERDGSVEESTVTEQSVGG--GRKRRDFSSEDESSK 83
Query: 312 AKGGQSSGEAAKD------------NTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPK 359
SSG +D N + K + + SS +K+A +Q S+ S+PPK
Sbjct: 84 MVSTSSSGNELQDSNVKRMKISGSQNENGKSKAEVEASSANDKNAAEQN---SKISEPPK 140
Query: 360 EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 419
++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 141 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 200
Query: 420 SLQRQVEFLSMKLATVNPRLDFN 442
SLQRQVEFLSMKL VN R+ N
Sbjct: 201 SLQRQVEFLSMKLEAVNSRMGMN 223
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 116/147 (78%), Gaps = 9/147 (6%)
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
+D +EEY+HVRA+RGQATNSHSLAER RREKI+ERMK LQDLVPGC+K+TGKA+MLDEI
Sbjct: 618 ADASREEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEI 677
Query: 415 INYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPP 474
INYVQSLQRQVEFLSMKL+T++P L+ +++ +D+L S+ S+ LG SP + +P
Sbjct: 678 INYVQSLQRQVEFLSMKLSTISPELNSDLD---LQDILCSQDARSAFLGCSPQLSNAHPN 734
Query: 475 VHQ-SQAGL----MHGALPGMGNPSDI 496
+++ +Q L ++G++ + NP+D+
Sbjct: 735 LYRAAQQCLSPPGLYGSV-CVPNPADV 760
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 110/163 (67%), Gaps = 14/163 (8%)
Query: 299 KRKRNGQDIEFDQAKGGQSS-------GEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQ- 350
K++R ++ E + +G ++ G+ + T KG+ G +GK KQ
Sbjct: 60 KKRRQAEEEEVESTRGASTTNAVDEGCGDGKRVKTSESGKGE------GESCSGKPAKQS 113
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
G S+PPK++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++
Sbjct: 114 GKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 173
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
LDEIINY+QSLQRQVEFLSMKL VN R+ IE KD Q
Sbjct: 174 LDEIINYIQSLQRQVEFLSMKLEAVNSRIAPGIEVFPPKDFDQ 216
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 116/147 (78%), Gaps = 9/147 (6%)
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
+D +EEY+HVRA+RGQATNSHSLAER RREKI+ERMK LQDLVPGC+K+TGKA+MLDEI
Sbjct: 618 ADASREEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEI 677
Query: 415 INYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPP 474
INYVQSLQRQVEFLSMKL+T++P L+ +++ +D+L S+ S+ LG SP + +P
Sbjct: 678 INYVQSLQRQVEFLSMKLSTISPELNSDLD---LQDILCSQDARSAFLGCSPQLSNAHPN 734
Query: 475 VHQ-SQAGL----MHGALPGMGNPSDI 496
+++ +Q L ++G++ + NP+D+
Sbjct: 735 LYRAAQQCLSPPGLYGSV-CVPNPADV 760
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 94/114 (82%), Gaps = 6/114 (5%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P ++YIHVRARRGQAT+SHSLAERVRRE+ISERMK LQ LVPGC+K+TGKA+MLDEIINY
Sbjct: 104 PAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINY 163
Query: 418 VQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV------LQSRAGPSSTLGFS 465
VQSLQRQVEFLSMKLAT+NP+LDF+ + +KD+ + P++T FS
Sbjct: 164 VQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDMSHMPVPAYPSSDPTTTTAFS 217
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/146 (61%), Positives = 108/146 (73%), Gaps = 8/146 (5%)
Query: 318 SGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDP--PKEEYIHVRARRGQATNS 375
+G+A K R + S + G+Q K + + P P ++Y+HVRARRGQAT+S
Sbjct: 136 TGDAEKKAAAPVRPKAEQAGSDSSVEDGEQRKGKGKNAKPVEPPKDYVHVRARRGQATDS 195
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 435
HSLAERVRRE+IS+RMKFLQDLVPGC+KV GKA+MLDEIINYVQSLQRQVEFLSMKLATV
Sbjct: 196 HSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATV 255
Query: 436 NPRLDF-NIEELLAKDVLQSRAGPSS 460
NP LDF N+ LL KD+ GPS+
Sbjct: 256 NP-LDFSNLPTLLHKDMY----GPSA 276
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/126 (65%), Positives = 98/126 (77%), Gaps = 2/126 (1%)
Query: 340 GNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVP 399
G K A + + Q D P +Y+HVRARRGQAT+SHSLAERVRREKI+ +MK LQDLVP
Sbjct: 152 GRKQAKGKSSKSKQADDEPPRDYVHVRARRGQATDSHSLAERVRREKITIKMKMLQDLVP 211
Query: 400 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN-IEELLAKDVLQSRAGP 458
GC+KV GKA+MLDEIINYVQSLQ+QVEFLSMKLATVNP+LDF+ + LL KD + GP
Sbjct: 212 GCNKVIGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSTLSTLLHKD-MNEAFGP 270
Query: 459 SSTLGF 464
S + F
Sbjct: 271 SPSSVF 276
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/131 (64%), Positives = 99/131 (75%), Gaps = 2/131 (1%)
Query: 343 SAGKQGKQGSQ-TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 401
S+GK +Q ++ S+PPK++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC
Sbjct: 123 SSGKPAEQSAKPASEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 182
Query: 402 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSST 461
+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN RL+ IE KD Q P+
Sbjct: 183 NKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNSGIEAFPPKDFGQQAFDPAG- 241
Query: 462 LGFSPDMPLVY 472
+ F P Y
Sbjct: 242 IPFGSQAPREY 252
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 94/121 (77%)
Query: 333 DHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMK 392
+H S S+GK +Q +Q + PK++YIHVRARRGQAT+SHSLAER RREKISERMK
Sbjct: 106 NHDSKSEAEPSSGKHVEQNTQPPELPKQDYIHVRARRGQATDSHSLAERARREKISERMK 165
Query: 393 FLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVL 452
LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R+ IE +KD
Sbjct: 166 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMTPGIEAFPSKDFG 225
Query: 453 Q 453
Q
Sbjct: 226 Q 226
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 162 bits (411), Expect = 3e-37, Method: Composition-based stats.
Identities = 80/109 (73%), Positives = 91/109 (83%)
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
+GK+ PPK+ +IHVRARRGQATNSHSLAER RREKIS RMKFLQ LVPGCS+VTG
Sbjct: 1 RGKKVKNKEQPPKQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTG 60
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSR 455
KAVML+EIINYV+SLQRQ+EFLSMKLA V+PRLD N+E LL +V R
Sbjct: 61 KAVMLEEIINYVKSLQRQIEFLSMKLAAVDPRLDTNVEGLLKMEVCAVR 109
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 88/103 (85%)
Query: 345 GKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
G GK+ + PPK+ +IHVRARRGQAT+ HSLAER RREKIS RMKFLQ LVPGCS+V
Sbjct: 130 GHSGKKVKKKEQPPKQGFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEV 189
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELL 447
TGKAVML+EIINYV+SLQRQ+EFLSMKLA V+PR+D N+E LL
Sbjct: 190 TGKAVMLEEIINYVKSLQRQIEFLSMKLAAVDPRVDTNVEGLL 232
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 77/103 (74%), Positives = 89/103 (86%)
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
K+ QTS PK +YIHVRARRGQAT+SHSLAER RREKIS++MK LQDLVPGC+K+TG+A
Sbjct: 186 KENQQTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGRA 245
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
MLDEIINYVQSLQRQVEFLSMKLA +NPR +FNI+ K+V
Sbjct: 246 GMLDEIINYVQSLQRQVEFLSMKLAALNPRPEFNIDNFSGKEV 288
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 161 bits (408), Expect = 7e-37, Method: Composition-based stats.
Identities = 81/94 (86%), Positives = 87/94 (92%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
PK+ YIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVP CSKVTGKAVMLDEIINY
Sbjct: 18 PKQHYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINY 77
Query: 418 VQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
VQSLQRQ+EFLSMKLA V+PRLD N+ LL K+V
Sbjct: 78 VQSLQRQIEFLSMKLAAVDPRLDINLLNLLNKEV 111
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/107 (71%), Positives = 92/107 (85%), Gaps = 1/107 (0%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
+PP++ Y+HVRARRGQAT+SHSLAERVRRE+IS+RMK LQDLVPGC+KV GKA+MLDEII
Sbjct: 186 EPPRD-YVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 244
Query: 416 NYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTL 462
NYVQSLQRQVEFLSMKLATVNP N+ LL KD+ Q+ +S++
Sbjct: 245 NYVQSLQRQVEFLSMKLATVNPLDLSNLPTLLQKDMFQACGASASSV 291
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 25/54 (46%)
Query: 144 LSQFPADSAFIERAARFSSFSGGNFCDMMNTFGTPEPTGLYSRGRGMMQGPQEV 197
L +F D F RAAR SSFSG F FG P P S G G G +E
Sbjct: 33 LDRFCGDPGFAARAARLSSFSGQRFAVTAGLFGLPPPLSAASGGGGEFAGSREA 86
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 160 bits (406), Expect = 1e-36, Method: Composition-based stats.
Identities = 74/83 (89%), Positives = 81/83 (97%)
Query: 360 EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 419
++YIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGCSK+TGKAVML+EIINYVQ
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQ 60
Query: 420 SLQRQVEFLSMKLATVNPRLDFN 442
SLQRQ+EFLSMKLA V+PRLD N
Sbjct: 61 SLQRQIEFLSMKLAAVDPRLDIN 83
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/142 (60%), Positives = 103/142 (72%), Gaps = 12/142 (8%)
Query: 335 KPSSTGNKSAGKQGKQGSQTSDPPKE-----------EYIHVRARRGQATNSHSLAERVR 383
KP G+ S+ + G +Q PP + +Y+HVRARRGQAT+SHSLAERVR
Sbjct: 153 KPEQAGSDSSVEDGGAQNQKPPPPVKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVR 212
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI 443
RE+IS+RMK LQDLVPGC+KV GKA+MLDEIINYVQSLQRQVEFLSMKLATVNP N+
Sbjct: 213 RERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPLDLSNL 272
Query: 444 EELLAKDVLQSRAGPSSTLGFS 465
LL KD+ Q+ G S++ FS
Sbjct: 273 PTLLQKDMFQA-CGASASSVFS 293
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/112 (70%), Positives = 91/112 (81%), Gaps = 1/112 (0%)
Query: 343 SAGKQGKQ-GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 401
S+GK +Q G S+PPK++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC
Sbjct: 110 SSGKPAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGC 169
Query: 402 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
+KV GKA++LDEIINY+QSLQRQ EFLSMKL VN R++ IE KD Q
Sbjct: 170 NKVIGKALVLDEIINYIQSLQRQAEFLSMKLEAVNSRMESGIEVFPPKDFDQ 221
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 121/170 (71%), Gaps = 6/170 (3%)
Query: 334 HKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKF 393
H TG S + + + ++ +E+Y+H+RA+RGQATN+HSLAER RREKI+ERMK
Sbjct: 87 HSQEGTGAVSKREVNSEKAGDAESNREDYVHIRAKRGQATNNHSLAERFRREKINERMKH 146
Query: 394 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
LQDLVPGC+K+TGKA+MLDEIINYVQSLQRQVEFLSMKL+ V+P L+ +++ +D+L
Sbjct: 147 LQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAVSPELNCDLD---FQDILC 203
Query: 454 SRAGPSSTLGFSPDMPLVYPPVHQ-SQAGLMHGALPGMG-NPSDI-LRRT 500
+ S+ G+ P + V+P +++ SQ GL L G NP+++ L RT
Sbjct: 204 PQDARSAFPGYGPRLSNVHPNLYRASQQGLSRPELYGSSPNPANVHLART 253
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 97/125 (77%), Gaps = 6/125 (4%)
Query: 330 RKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISE 389
RK + +PSS GK + +Q +P K++YIHVRARRGQAT+SHSLAER RREKISE
Sbjct: 45 RKHEAEPSS------GKHVEHKTQPPEPSKQDYIHVRARRGQATDSHSLAERARREKISE 98
Query: 390 RMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAK 449
RMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IE +K
Sbjct: 99 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMNPGIEVFASK 158
Query: 450 DVLQS 454
D Q+
Sbjct: 159 DFGQT 163
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/146 (55%), Positives = 104/146 (71%), Gaps = 4/146 (2%)
Query: 328 NQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKI 387
NQR K + + K+ K S D K Y+HVRARRGQAT+SHSLAER RREKI
Sbjct: 165 NQRSAKRKEREKKGRGSTKKSKNESN-EDAEKLPYVHVRARRGQATDSHSLAERARREKI 223
Query: 388 SERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELL 447
+ RMK LQ+LVPGC+K++G A++LDEIIN+VQSLQRQVEFLSM+LA VNPR+DFNIE +L
Sbjct: 224 NARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIESIL 283
Query: 448 AKD---VLQSRAGPSSTLGFSPDMPL 470
A + +L+S + P++P+
Sbjct: 284 ATENEPILESNFPTMVSPLMWPEIPV 309
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 112/171 (65%), Gaps = 15/171 (8%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRRE+ISERM++LQ+LVPGC+KVTGKA MLDEIINYV
Sbjct: 158 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYV 217
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNI-EELLAKDVLQSRAGPSSTLGFSPDMPLVYP---- 473
QSLQ+QVEFLSMK+A NP ++FNI E+L + + Q+ P++ + M V P
Sbjct: 218 QSLQKQVEFLSMKIAASNPVVNFNIVEDLFGRQLSQAACNPAALPAMALPMAQVEPSCLQ 277
Query: 474 --PVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPSQVSFYP 522
P+ Q Q G+ L +++Q +P G P+ S P
Sbjct: 278 MSPLQQMQT--------SAGSSGYGLEMVVSNQYSPPGGPMSVPAGASVEP 320
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 108/167 (64%), Gaps = 9/167 (5%)
Query: 306 DIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHV 365
D E + K +SSG+ + TE + T +++A K G Q +PPK++YIHV
Sbjct: 86 DSEAKRFKASKSSGDNSSLRTE---------AETDSRNASKSGDQNPPPPEPPKQDYIHV 136
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA +LDEIINY+Q+LQRQV
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQV 196
Query: 426 EFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVY 472
EFLSMKL VN ++ IE KD + L F P P Y
Sbjct: 197 EFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNTAPGLTFDPQTPREY 243
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 112/171 (65%), Gaps = 15/171 (8%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRRE+ISERM++LQ+LVPGC+KVTGKA MLDEIINYV
Sbjct: 158 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYV 217
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNI-EELLAKDVLQSRAGPSSTLGFSPDMPLVYP---- 473
QSLQ+QVEFLSMK+A NP ++FNI E+L + + Q+ P++ + M V P
Sbjct: 218 QSLQKQVEFLSMKIAASNPVVNFNIVEDLFGRQLSQAACNPAALPAMALPMAQVEPSCLQ 277
Query: 474 --PVHQSQAGLMHGALPGMGNPSDILRRTINSQLTPMTGGFKEPSQVSFYP 522
P+ Q Q G+ L +++Q +P G P+ S P
Sbjct: 278 MSPLQQMQT--------SAGSSGYGLEMVVSNQYSPPGGPMSVPAGASVEP 320
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 108/167 (64%), Gaps = 9/167 (5%)
Query: 306 DIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHV 365
D E + K +SSG+ + TE + T +++A K G Q +PPK++YIHV
Sbjct: 86 DSEAKRFKASKSSGDNSSLRTE---------AETDSRNASKSGDQNPPPPEPPKQDYIHV 136
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA +LDEIINY+Q+LQRQV
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQV 196
Query: 426 EFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVY 472
EFLSMKL VN ++ IE KD + L F P P Y
Sbjct: 197 EFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNTAPGLTFDPQTPREY 243
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 108/167 (64%), Gaps = 9/167 (5%)
Query: 306 DIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHV 365
D E + K +SSG+ + TE + T +++A K G Q +PPK++YIHV
Sbjct: 45 DSEAKRFKASKSSGDNSSLRTE---------AETDSRNASKSGDQNPPPPEPPKQDYIHV 95
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA +LDEIINY+Q+LQRQV
Sbjct: 96 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQV 155
Query: 426 EFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVY 472
EFLSMKL VN ++ IE KD + L F P P Y
Sbjct: 156 EFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNTAPGLTFDPQTPREY 202
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/117 (67%), Positives = 96/117 (82%), Gaps = 6/117 (5%)
Query: 337 SSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 396
S+ GNKS+ +Q ++ + PK++YIHVRARRGQAT+SHSLAER RREKISERMK LQD
Sbjct: 115 SAGGNKSS----EQSNKPCEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQD 170
Query: 397 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN--IEELLAKDV 451
LVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ N I+ +KDV
Sbjct: 171 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNMNPTIDGFPSKDV 227
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 104/148 (70%), Gaps = 8/148 (5%)
Query: 304 GQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPS-STGNKSAGKQGKQGSQTSDPPKEEY 362
GQD+ +AK +K N + KG + T ++SAGK + ++PPK++Y
Sbjct: 71 GQDLTDLEAK-------RSKTNKSSNNKGSLRTEVETDSRSAGKAVSKNIPAAEPPKQDY 123
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
IHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA +LDEIINY+QSLQ
Sbjct: 124 IHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQ 183
Query: 423 RQVEFLSMKLATVNPRLDFNIEELLAKD 450
QVEFLSMKL VN + + +E AKD
Sbjct: 184 CQVEFLSMKLEAVNAQANQGVEVFPAKD 211
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/96 (75%), Positives = 87/96 (90%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P ++YIHVRARRGQAT+SHSLAERVRR++ISERMK LQ LVPGC+K+TGKA+MLDEIINY
Sbjct: 240 PVKDYIHVRARRGQATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINY 299
Query: 418 VQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
VQSLQRQVEFLSMKL+T+NP+LD + + +KD+ Q
Sbjct: 300 VQSLQRQVEFLSMKLSTMNPQLDLDGQYKPSKDMNQ 335
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 101/141 (71%), Gaps = 2/141 (1%)
Query: 313 KGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQA 372
K +SSG ++D + G+ +S +Q + S + PPK++YIHVRARRGQA
Sbjct: 48 KHIKSSGSGSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQA 107
Query: 373 TNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 432
T+SHSLAER RREKISERMK LQD+VPGC+KV GKA++LDEIINY+QSLQ QVEFLSMKL
Sbjct: 108 TDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKL 167
Query: 433 ATVNPRLDFN--IEELLAKDV 451
VN RL + IE +K+V
Sbjct: 168 EAVNSRLSMSPTIECFPSKEV 188
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/148 (58%), Positives = 101/148 (68%), Gaps = 12/148 (8%)
Query: 335 KPSSTGNKSAGKQGKQGSQTSDPPKE-----------EYIHVRARRGQATNSHSLAERVR 383
KP G+ S+ + G +Q PP + +Y+HVRARRGQAT+SHSLAERVR
Sbjct: 153 KPEQAGSDSSVEDGGAQNQKPPPPVKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVR 212
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI 443
RE+IS+RMK LQDLVPGC+KV GKA+MLDEIINYVQSLQRQVEFLSMKLATVNP N+
Sbjct: 213 RERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPLDLSNL 272
Query: 444 EELLAKDVLQSRAGPSSTL-GFSPDMPL 470
LL KD + A +L SP P
Sbjct: 273 PTLLQKDACGASASSVFSLESCSPGFPF 300
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/124 (62%), Positives = 92/124 (74%)
Query: 330 RKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISE 389
R +H+ + +GK + T + PK++YIHVRARRGQAT+SHSLAER RREKISE
Sbjct: 136 RDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISE 195
Query: 390 RMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAK 449
RMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R+ IE K
Sbjct: 196 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPK 255
Query: 450 DVLQ 453
D Q
Sbjct: 256 DYGQ 259
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 94/123 (76%), Gaps = 8/123 (6%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRRE+ISERM++LQ+LVPGCSKVTGKA MLDEIINYV
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 199
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSS--------TLGFSPDMPL 470
QSLQ+QVEFLSMK+A NP + F+I E L L+ GP++ + SP +
Sbjct: 200 QSLQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQACGPAAGQLEPSCLQMSMSPMQQV 259
Query: 471 VYP 473
V+P
Sbjct: 260 VHP 262
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 94/123 (76%), Gaps = 8/123 (6%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRRE+ISERM++LQ+LVPGCSKVTGKA MLDEIINYV
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 199
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSS--------TLGFSPDMPL 470
QSLQ+QVEFLSMK+A NP + F+I E L L+ GP++ + SP +
Sbjct: 200 QSLQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQACGPAAGQLEPSCLQMSMSPMQQV 259
Query: 471 VYP 473
V+P
Sbjct: 260 VHP 262
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/114 (70%), Positives = 90/114 (78%)
Query: 338 STGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 397
ST N + GK+ S+ ++YIHVRARRGQAT+SHSLAERVRREKISERMK LQDL
Sbjct: 6 STENTTNSNLGKENSKPGAGNTQDYIHVRARRGQATDSHSLAERVRREKISERMKTLQDL 65
Query: 398 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
VPGCSKVTGKA+MLDEIINYVQSLQRQVEFLSMKLA V P L + ++ DV
Sbjct: 66 VPGCSKVTGKAMMLDEIINYVQSLQRQVEFLSMKLAAVKPALYTDAYQVRKPDV 119
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 90/108 (83%)
Query: 344 AGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
AG++ + S+ ++ K++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+K
Sbjct: 121 AGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
V GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ +E KD+
Sbjct: 181 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPLKDL 228
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 102/149 (68%), Gaps = 3/149 (2%)
Query: 324 DNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVR 383
D EN +S+G K Q +Q S+ PK++YIHVRARRGQAT+SHSLAER R
Sbjct: 92 DGNENSNSKTEAEASSG--LCNKLADQSNQPSEAPKQDYIHVRARRGQATDSHSLAERAR 149
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI 443
REKISERM LQDLVPGC+KV GKA +LDEIINY+Q+LQRQVEFLSMKL VN +++ I
Sbjct: 150 REKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNSQMNPGI 209
Query: 444 EELLAKDVLQSRAGPSSTLGFSPDMPLVY 472
E KD ++A + +L FS P Y
Sbjct: 210 EGFPPKD-FGAQAYETPSLAFSSQAPREY 237
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 80/84 (95%)
Query: 360 EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 419
++YIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGCSKVTGKAVMLDEIINYVQ
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 332
Query: 420 SLQRQVEFLSMKLATVNPRLDFNI 443
SLQ QVEFLSMKL+TV+PR + ++
Sbjct: 333 SLQCQVEFLSMKLSTVDPRRELDV 356
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 96/136 (70%)
Query: 337 SSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 396
+ T +++A K G Q +PPK++YIHVRARRGQAT+SHSLAER RREKISERMK LQD
Sbjct: 106 AETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQD 165
Query: 397 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRA 456
LVPGC+KV GKA +LDEIINY+Q+LQRQVEFLSMKL VN ++ IE KD
Sbjct: 166 LVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPPKDFGAQVY 225
Query: 457 GPSSTLGFSPDMPLVY 472
+ L F P P Y
Sbjct: 226 NTAPGLTFDPQTPREY 241
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 80/84 (95%)
Query: 360 EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 419
++YIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGCSKVTGKAVMLDEIINYVQ
Sbjct: 253 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 312
Query: 420 SLQRQVEFLSMKLATVNPRLDFNI 443
SLQ QVEFLSMKL+TV+PR + ++
Sbjct: 313 SLQCQVEFLSMKLSTVDPRRELDV 336
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 90/108 (83%)
Query: 344 AGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
AG++ + S+ ++ K++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+K
Sbjct: 136 AGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 195
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
V GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ +E KD+
Sbjct: 196 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPLKDL 243
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 113/149 (75%), Gaps = 8/149 (5%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
+E+Y+HVRA+RGQATNSHSLAER RREKI+ERMK LQDLVPGC+K+TGKA+MLDEIINYV
Sbjct: 117 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYV 176
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQ- 477
QSLQRQVEFLSMKL+ ++P L+ +++ +D+L ++ S+ G++ V+ +++
Sbjct: 177 QSLQRQVEFLSMKLSAISPELNCDLD---LQDILCTQDASSAFPGYNVQANNVHLNLYRA 233
Query: 478 SQAGLMHGALPGMGNPSDILRRTINSQLT 506
S+ H +P NP+++ T N+QL+
Sbjct: 234 SEEDFSHRIIP---NPANV-HVTRNAQLS 258
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/126 (62%), Positives = 96/126 (76%), Gaps = 5/126 (3%)
Query: 328 NQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKI 387
N + + + SS N K +Q S+ S+PPK++YIHVRARRGQAT+SHSLAER RREKI
Sbjct: 50 NDSRAETEASSAAN---NKTAEQSSKPSEPPKQDYIHVRARRGQATDSHSLAERARREKI 106
Query: 388 SERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN--IEE 445
SERM LQDLVPGC+KV GKA++LDEIINY+QSLQ QVEFLSMKL VN R++ + E
Sbjct: 107 SERMNMLQDLVPGCNKVIGKALVLDEIINYIQSLQCQVEFLSMKLEAVNSRMNTSPTTEH 166
Query: 446 LLAKDV 451
L KD+
Sbjct: 167 LHPKDL 172
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/122 (64%), Positives = 95/122 (77%), Gaps = 7/122 (5%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRRE+ISERM++LQ+LVPGC KVTGKA MLDEIINYV
Sbjct: 144 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYV 203
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNI-EELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQ 477
QSLQ+QVEFLSMK+A NP ++FNI ++L + GP++ L P M L P+H
Sbjct: 204 QSLQKQVEFLSMKIAAANPVVNFNIVDDLFGGRRMSQPCGPAAAL---PAMTL---PMHH 257
Query: 478 SQ 479
Q
Sbjct: 258 GQ 259
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 91/121 (75%)
Query: 330 RKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISE 389
R +H+ + +GK + T + PK++YIHVRARRGQAT+SHSLAER RREKISE
Sbjct: 12 RDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISE 71
Query: 390 RMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAK 449
RMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R+ IE K
Sbjct: 72 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPK 131
Query: 450 D 450
D
Sbjct: 132 D 132
>gi|147818198|emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
Length = 484
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 107/176 (60%), Gaps = 29/176 (16%)
Query: 320 EAAKDNTENQRKGDHK--PSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHS 377
E +K+ E ++K D P+ G K K K S + PKE YIHVRARRGQATNSHS
Sbjct: 219 EFSKEQEEKKQKIDQNMSPNLRG-KQPNKHAKDNSSNGEAPKENYIHVRARRGQATNSHS 277
Query: 378 LAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 437
LAER+ TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP
Sbjct: 278 LAERI----------------------TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 315
Query: 438 RLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMHGALPGMGNP 493
L+ +IE LL+KD+L SR G +S LGF P M +P H G+ G LPG+ P
Sbjct: 316 ELNIDIERLLSKDILNSRGGSTSVLGFGPGMSSSHPYPH----GISQGTLPGIPTP 367
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 108/173 (62%), Gaps = 9/173 (5%)
Query: 300 RKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPK 359
R + D E KG +S E T NQ+ S NK A Q +Q + PK
Sbjct: 2 RGNDATDSEAKCLKGMKSRDE----ETANQKXEAEASSGLCNKLAD----QNTQPLEAPK 53
Query: 360 EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 419
++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA +LDEIINY+Q
Sbjct: 54 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQ 113
Query: 420 SLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVY 472
+LQRQVEFLSMKL VN R + IE KD ++A + L F P Y
Sbjct: 114 ALQRQVEFLSMKLEAVNSRTNSGIEGFPPKD-FGAQAYDAPNLAFGLQAPREY 165
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/98 (75%), Positives = 87/98 (88%), Gaps = 1/98 (1%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRRE+ISERM++LQ+LVPGCSKVTGKA MLDEIINYV
Sbjct: 137 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 196
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNI-EELLAKDVLQSR 455
QSLQ+QVEFLSMK+A NP + F+I E+L + + QSR
Sbjct: 197 QSLQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQSR 234
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/98 (75%), Positives = 87/98 (88%), Gaps = 1/98 (1%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRRE+ISERM++LQ+LVPGCSKVTGKA MLDEIINYV
Sbjct: 137 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 196
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNI-EELLAKDVLQSR 455
QSLQ+QVEFLSMK+A NP + F+I E+L + + QSR
Sbjct: 197 QSLQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQSR 234
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/141 (56%), Positives = 100/141 (70%), Gaps = 2/141 (1%)
Query: 313 KGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQA 372
K +SSG ++D + G+ +S +Q + S + PPK++YIHVRARRGQA
Sbjct: 48 KHIKSSGSGSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQA 107
Query: 373 TNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 432
T+SHSLAER RREKISERMK LQD+VPGC+KV GKA++LDEIINY+QSLQ QVEFL MKL
Sbjct: 108 TDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLFMKL 167
Query: 433 ATVNPRLDFN--IEELLAKDV 451
VN RL + IE +K+V
Sbjct: 168 EAVNSRLSMSPIIECFPSKEV 188
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/98 (75%), Positives = 87/98 (88%), Gaps = 1/98 (1%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRRE+ISERM++LQ+LVPGCSKVTGKA MLDEIINYV
Sbjct: 137 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 196
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNI-EELLAKDVLQSR 455
QSLQ+QVEFLSMK+A NP + F+I E+L + + QSR
Sbjct: 197 QSLQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQSR 234
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 120/204 (58%), Gaps = 19/204 (9%)
Query: 261 ASGGDSDEAEFSGGGGQDEPSAVEGTGGEPS----------AKGLSSKKRKRNGQDIEFD 310
++ GDS F G + G+P+ +G+S ++R D
Sbjct: 27 STAGDSSRRSFVGPNQFGDADLTTAANGDPARMSHALSQAVIEGISGAWKRRE------D 80
Query: 311 QAKGGQSSGEAAKDNTENQR-KGDHKPSSTGN-KSAGKQGKQGSQTSDPPKEEYIHVRAR 368
++K + EN+R K D +S G + +Q Q +P K+ YIHVRAR
Sbjct: 81 ESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKD-YIHVRAR 139
Query: 369 RGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
RGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFL
Sbjct: 140 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
Query: 429 SMKLATVNPRLDFNIEELLAKDVL 452
SMKL VN R++ IE K+V+
Sbjct: 200 SMKLEAVNSRMNPGIEVFPPKEVM 223
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 120/204 (58%), Gaps = 19/204 (9%)
Query: 261 ASGGDSDEAEFSGGGGQDEPSAVEGTGGEPS----------AKGLSSKKRKRNGQDIEFD 310
++ GDS F G + G+P+ +G+S ++R D
Sbjct: 27 STAGDSSRRSFVGPNQFGDADLTTAANGDPARMSHALSQAVIEGISGAWKRRE------D 80
Query: 311 QAKGGQSSGEAAKDNTENQR-KGDHKPSSTGN-KSAGKQGKQGSQTSDPPKEEYIHVRAR 368
++K + EN+R K D +S G + +Q Q +P K+ YIHVRAR
Sbjct: 81 ESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKD-YIHVRAR 139
Query: 369 RGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
RGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFL
Sbjct: 140 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
Query: 429 SMKLATVNPRLDFNIEELLAKDVL 452
SMKL VN R++ IE K+V+
Sbjct: 200 SMKLEAVNSRMNPGIEVFPPKEVM 223
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 93/116 (80%), Gaps = 8/116 (6%)
Query: 335 KPSSTGNKSA--------GKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREK 386
K +TG+K A G + + S+ ++PPK++YIHVRARRGQAT+SHSLAER RRE+
Sbjct: 55 KNGNTGSKEAEVEASSADGSKPDKNSKPAEPPKQDYIHVRARRGQATDSHSLAERARRER 114
Query: 387 ISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN 442
ISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQ+QVEFLSMKL VN R++ N
Sbjct: 115 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQQQVEFLSMKLEAVNSRINVN 170
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 91/114 (79%), Gaps = 3/114 (2%)
Query: 341 NKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 400
N S GK+ + S +PPK+ YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPG
Sbjct: 124 NSSDGKKLAEQSPKPEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 182
Query: 401 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN--IEELLAKDVL 452
C+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IE K+++
Sbjct: 183 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNITPGIEGFTVKNIV 236
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 89/109 (81%), Gaps = 1/109 (0%)
Query: 345 GKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
GK ++ SQ +PPK+ YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV
Sbjct: 150 GKSAEKSSQPPEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 208
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
GKA++LDEIINY+QSLQRQVEFLSMKL VN ++ I +KDV Q
Sbjct: 209 IGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGVNPAINCFPSKDVNQ 257
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/147 (55%), Positives = 100/147 (68%), Gaps = 6/147 (4%)
Query: 304 GQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYI 363
GQD+ +AK ++ + + N + T +SAGK + ++PPK++YI
Sbjct: 69 GQDLTDPEAKRSKT------NKSSNNNGSLRTEAETDPRSAGKAVSKSLPAAEPPKQDYI 122
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
HVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA +LDEIINY+QSLQ
Sbjct: 123 HVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQC 182
Query: 424 QVEFLSMKLATVNPRLDFNIEELLAKD 450
QVEFLSMKL VN + +E KD
Sbjct: 183 QVEFLSMKLEAVNAHANQGVEAFPVKD 209
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 120/204 (58%), Gaps = 19/204 (9%)
Query: 261 ASGGDSDEAEFSGGGGQDEPSAVEGTGGEPS----------AKGLSSKKRKRNGQDIEFD 310
++ GDS F G + G+P+ +G+S ++R D
Sbjct: 21 STAGDSSRRSFVGPNQFGDADLTTAANGDPARMSHALSQAVIEGISGAWKRRE------D 74
Query: 311 QAKGGQSSGEAAKDNTENQR-KGDHKPSSTGN-KSAGKQGKQGSQTSDPPKEEYIHVRAR 368
++K + EN+R K D +S G + +Q Q +P K+ YIHVRAR
Sbjct: 75 ESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKD-YIHVRAR 133
Query: 369 RGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
RGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFL
Sbjct: 134 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 193
Query: 429 SMKLATVNPRLDFNIEELLAKDVL 452
SMKL VN R++ IE K+V+
Sbjct: 194 SMKLEAVNSRMNPGIEVFPPKEVM 217
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 98/128 (76%), Gaps = 9/128 (7%)
Query: 326 TENQRKGDHKPSSTGNKSAG----KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAER 381
TE+ KG S+ GN A K+ +G+ S+ K +YIHVRARRGQAT+ HSLAER
Sbjct: 149 TESNMKGK---SNMGNTEASSDTSKEISKGA--SESQKLDYIHVRARRGQATDRHSLAER 203
Query: 382 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
RREKIS++MK+LQDLVPGC+KVTGKA MLDEIINYVQSLQRQVEFLSMKLA +NP L+
Sbjct: 204 ARREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLSMKLAVLNPELEL 263
Query: 442 NIEELLAK 449
+E+L K
Sbjct: 264 AVEDLSVK 271
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 121/228 (53%), Gaps = 60/228 (26%)
Query: 276 GQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQ-------AKGGQSSGEAAKDNTEN 328
G+D + + SA L S++R + F Q AK + S +AA D
Sbjct: 189 GKDAATTIAKVLRLLSAPPLQSRRRTSPETMVNFPQSPEPGTKAKKCKLSADAAGDEDTK 248
Query: 329 QRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERV------ 382
GD G+ GK GK +PPK+ YIHVRARRGQAT+SHSLAERV
Sbjct: 249 PVAGD-----AGHGGNGK-GKVLDAAGEPPKD-YIHVRARRGQATDSHSLAERVKAAGID 301
Query: 383 --------------------------RREKISERMKFLQDLVPGCSKV------------ 404
RREKISERMK LQDLVPGC+KV
Sbjct: 302 AANHNFFFSSILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFT 361
Query: 405 --TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
TGKAVMLDEIINYVQSLQRQVEFLSMKL+TVNP+LDF+++ + KD
Sbjct: 362 LVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKD 409
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 121/228 (53%), Gaps = 60/228 (26%)
Query: 276 GQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQ-------AKGGQSSGEAAKDNTEN 328
G+D + + SA L S++R + F Q AK + S +AA D
Sbjct: 189 GKDAATTIAKVLRLLSAPPLQSRRRTSPETMVNFPQSPEPGTKAKKCKLSADAAGDEDTK 248
Query: 329 QRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERV------ 382
GD G+ GK GK +PPK+ YIHVRARRGQAT+SHSLAERV
Sbjct: 249 PVAGD-----AGHGGNGK-GKVLDAAGEPPKD-YIHVRARRGQATDSHSLAERVKAAGID 301
Query: 383 --------------------------RREKISERMKFLQDLVPGCSKV------------ 404
RREKISERMK LQDLVPGC+KV
Sbjct: 302 AANHNFFFSSILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFT 361
Query: 405 --TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
TGKAVMLDEIINYVQSLQRQVEFLSMKL+TVNP+LDF+++ + KD
Sbjct: 362 LVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKD 409
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 102/158 (64%), Gaps = 9/158 (5%)
Query: 303 NGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTS------- 355
+G D + G +G+ D E + K S+ GN Q G+ +
Sbjct: 41 HGDDSSMLVSTSGTGAGQDLADPEEKRLKKMESDSADGNLRTNAQTDSGNASKVVDRNPT 100
Query: 356 --DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
+PPK++YIHVRARRGQAT+SHS+AER RREKISERMK LQDLVPGC+KV GKA +LDE
Sbjct: 101 PPEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDE 160
Query: 414 IINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
IINY+Q+LQRQVEFLSMKL VN ++ I +KDV
Sbjct: 161 IINYIQALQRQVEFLSMKLEAVNAHVNNRIASFQSKDV 198
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 92/114 (80%), Gaps = 6/114 (5%)
Query: 340 GNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVP 399
GNKS+ +Q ++ + PK +YIHVRARRGQAT+SHSLAER RREKISERMK LQDL P
Sbjct: 93 GNKSS----EQSNKPCEAPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLAP 148
Query: 400 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN--IEELLAKDV 451
GC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ N I+ +KDV
Sbjct: 149 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNTNPTIDGFPSKDV 202
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/96 (72%), Positives = 86/96 (89%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P ++YIHVRARRGQAT+SHSLAERVRREKI ERMK LQ LVP C+K+TGKA+MLDEIINY
Sbjct: 251 PVKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEIINY 310
Query: 418 VQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
VQSLQRQVEFLSMKL+T+NP+L+ + + + +K++ Q
Sbjct: 311 VQSLQRQVEFLSMKLSTMNPQLELDEQCIPSKEMNQ 346
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 107/167 (64%), Gaps = 20/167 (11%)
Query: 299 KRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPP 358
K++R+ +D D AK +S A N N G + ++GNK+ G GK + S
Sbjct: 77 KKRRDSED---DSAKCVSTSNGGA--NAVNDSDG-KRTKASGNKNEGGDGKVEGEASSGK 130
Query: 359 KEE--------------YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
E YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV
Sbjct: 131 HAEQSSKPPPSDPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 190
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
GKA++LDEIINY+QSLQRQVEFLSMKL VN RL+ IE KDV
Sbjct: 191 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEAFPPKDV 237
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Query: 324 DNTENQRKGDHKPSSTGN-KSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERV 382
D + +K +H+ S+ N K K+ K GSQ PKE YIHV+ARRG+A N+HSLAERV
Sbjct: 163 DKADKTQKVEHRLSANFNTKPDSKKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERV 222
Query: 383 RREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN 442
RREKISERMK LQ LVPGC ++TGK V+LDEIINYVQSLQ+QVEFLSMKLA+V
Sbjct: 223 RREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQVEFLSMKLASVGLESSLE 282
Query: 443 IEELL 447
E++L
Sbjct: 283 AEQIL 287
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 112/173 (64%), Gaps = 8/173 (4%)
Query: 278 DEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPS 337
D + TG E A L K KRN + + +G + + + K E + K +
Sbjct: 104 DTIEVLLKTGEENRAIAL---KNKRNPEV----KTRGEEKTEKKIKVEAETESSMKGKSN 156
Query: 338 STGNKSAGKQGKQGSQ-TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 396
+++ K+ S+ S+ K +YIHVRARRGQAT+ HSLAER RREKIS++MK+LQD
Sbjct: 157 MRNTEASSDTSKETSKKASEIQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQD 216
Query: 397 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAK 449
+VPGC+KVTGKA MLDEIINYVQ LQRQVEFLSMKLA +NP L+ +E++ K
Sbjct: 217 IVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVEDVSVK 269
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 108/157 (68%), Gaps = 10/157 (6%)
Query: 327 ENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEE--YIHVRARRGQATNSHSLAERVRR 384
+NQR K K + K+ K S + E+ Y+HVRARRGQAT+SHSLAER RR
Sbjct: 157 KNQRSTKRKEREKKAKGSTKKCKNASNETSEEAEKLPYVHVRARRGQATDSHSLAERARR 216
Query: 385 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
EKI+ RMK LQ+LVPGC+K++G A++LDEII++VQSLQRQVEFLSM+LA VNPR+DFN++
Sbjct: 217 EKINARMKLLQELVPGCNKISGTALVLDEIISHVQSLQRQVEFLSMRLAAVNPRIDFNLD 276
Query: 445 ELLAKD--VLQSRAGPSSTLGFSPDMPLVYPPVHQSQ 479
LLA + L PS MPL++P V ++
Sbjct: 277 SLLAPESGSLVDSNFPSMV------MPLMWPDVQANE 307
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 121/228 (53%), Gaps = 60/228 (26%)
Query: 276 GQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQ-------AKGGQSSGEAAKDNTEN 328
G+D + + SA L S++R + F Q AK + S +AA D
Sbjct: 68 GKDAATTIAKVLRLLSAPPLQSRRRTSPETMVNFPQSPEPGTKAKKCKLSADAAGDEDTK 127
Query: 329 QRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERV------ 382
GD G+ GK GK +PPK+ YIHVRARRGQAT+SHSLAERV
Sbjct: 128 PVAGD-----AGHGGNGK-GKVLDAAGEPPKD-YIHVRARRGQATDSHSLAERVKAAGID 180
Query: 383 --------------------------RREKISERMKFLQDLVPGCSKV------------ 404
RREKISERMK LQDLVPGC+KV
Sbjct: 181 AANHNFFFSSILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFT 240
Query: 405 --TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
TGKAVMLDEIINYVQSLQRQVEFLSMKL+TVNP+LDF+++ + KD
Sbjct: 241 LVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKD 288
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 112/176 (63%), Gaps = 14/176 (7%)
Query: 278 DEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPS 337
D + TG E A L +K++ E K + E TE+ KG S
Sbjct: 104 DTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEKKIKVEAE-----TESSMKGK---S 155
Query: 338 STGNKSAG----KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKF 393
+ GN A K+ +G+ S+ K +YIHVRARRGQAT+ HSLAER RREKIS++MK+
Sbjct: 156 NMGNTEASSDTSKETSKGA--SENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKY 213
Query: 394 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAK 449
LQD+VPGC+KVTGKA MLDEIINYVQ LQRQVEFLSMKLA +NP L+ +E++ K
Sbjct: 214 LQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVEDVSVK 269
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 112/176 (63%), Gaps = 14/176 (7%)
Query: 278 DEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPS 337
D + TG E A L +K++ E K + E TE+ KG S
Sbjct: 104 DTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEKKIKVEAE-----TESSMKGK---S 155
Query: 338 STGNKSAG----KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKF 393
+ GN A K+ +G+ S+ K +YIHVRARRGQAT+ HSLAER RREKIS++MK+
Sbjct: 156 NMGNTEASSDTSKETSKGA--SENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKY 213
Query: 394 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAK 449
LQD+VPGC+KVTGKA MLDEIINYVQ LQRQVEFLSMKLA +NP L+ +E++ K
Sbjct: 214 LQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVEDVSVK 269
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/105 (70%), Positives = 85/105 (80%), Gaps = 1/105 (0%)
Query: 339 TGNKSAGKQGKQGSQTSDPPKE-EYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 397
T A + K+ + SD PKE +YIHVRARRGQAT+SHSLAERVRRE+ISERMK+LQ+L
Sbjct: 105 TARGGATSKNKKKASGSDAPKETDYIHVRARRGQATDSHSLAERVRRERISERMKYLQEL 164
Query: 398 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN 442
VPGCSK+ GKA LDEIINYVQSLQRQVEFLSMKLA PR+ +
Sbjct: 165 VPGCSKIMGKASTLDEIINYVQSLQRQVEFLSMKLAAAEPRMHLS 209
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 112/176 (63%), Gaps = 14/176 (7%)
Query: 278 DEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPS 337
D + TG E A L +K++ E K + E TE+ KG S
Sbjct: 104 DTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEKKIKVEAE-----TESSMKGK---S 155
Query: 338 STGNKSAG----KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKF 393
+ GN A K+ +G+ S+ K +YIHVRARRGQAT+ HSLAER RREKIS++MK+
Sbjct: 156 NMGNTEASSDTSKETSKGA--SENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKY 213
Query: 394 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAK 449
LQD+VPGC+KVTGKA MLDEIINYVQ LQRQVEFLSMKLA +NP L+ +E++ K
Sbjct: 214 LQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVEDVSVK 269
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 107/169 (63%), Gaps = 20/169 (11%)
Query: 299 KRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPP 358
K++R+ +D D AK +S A N N G + ++GNK+ G GK + S
Sbjct: 77 KKRRDSED---DSAKCVSTSNGGA--NAVNDSDG-KRTKASGNKNEGGDGKVEGEASSGK 130
Query: 359 KEE--------------YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
E YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV
Sbjct: 131 HAEQSSKPPPSDPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 190
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
GKA++LDEIINY+QSLQRQVEFLSMKL VN RL+ IE KD Q
Sbjct: 191 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEAFPPKDYGQ 239
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 125/216 (57%), Gaps = 15/216 (6%)
Query: 269 AEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQ-----AKGGQSSGEAAK 323
A+FS G++ P E P+ G S + + E D ++ G S A +
Sbjct: 103 AKFSVFAGENSPLPPEEACLVPAGTGSVSNLDRVKNEPQETDSNPCSSSRLGCISDPAVE 162
Query: 324 DNTEN--QRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAER 381
+N + +RK K + S + + D K Y+HVR RRGQAT+SHSLAER
Sbjct: 163 NNNQRTAKRKEREKKLTVKGSSKKSKSIADETSGDGEKLPYVHVRVRRGQATDSHSLAER 222
Query: 382 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
RREKI+ RMK LQ+LVPGC K++G A++LDEIIN+VQSLQRQVE LSMKLA VNPR+DF
Sbjct: 223 ARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQVEILSMKLAAVNPRIDF 282
Query: 442 NIEELLAKDVLQSRAGPSSTLGFSPDM--PLVYPPV 475
+++ LLA D G S P M PL++P +
Sbjct: 283 SLDSLLATD------GASLMDNNLPSMVTPLMWPEI 312
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 118/189 (62%), Gaps = 21/189 (11%)
Query: 283 VEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDH-KPSSTGN 341
+E +P+ KKRK ++ G SS +A N++N +GD+ K + + +
Sbjct: 96 MESGNNKPNVTSPMDKKRK----------SREGSSSMTSA--NSKNVTQGDNGKKNKSNS 143
Query: 342 KSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 401
K K K+ ++ + YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC
Sbjct: 144 KLVAKDEKKANEEA---PTGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGC 200
Query: 402 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP-RLDFNIEELLAKDVLQSRAGPSS 460
KVTGKA+MLDEIINYVQSLQ QVEFLSMKLA++NP DF ++ D L R +
Sbjct: 201 DKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPMYYDFGMD----LDALMVRPDDQN 256
Query: 461 TLGFSPDMP 469
G +P
Sbjct: 257 LSGLETQLP 265
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 113/161 (70%), Gaps = 14/161 (8%)
Query: 315 GQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATN 374
G++ G A+ N+ N ++G G KS K+ K+GS+ + P +YIHVRARRGQAT+
Sbjct: 96 GKTRGRKAR-NSNNSKEG-----VEGRKS--KKQKRGSK--EEPPTDYIHVRARRGQATD 145
Query: 375 SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 434
SHSLAERVRREKISERM+ LQ+LVPGC KVTGKA+MLDEIINYVQ+LQ QVEFLSMKL +
Sbjct: 146 SHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTS 205
Query: 435 VNPRL-DFNIEELLAKDVLQSRAG-PSSTLGFSPDMPLVYP 473
++P + DF + L +LQS G P F+ MP P
Sbjct: 206 ISPVVYDFGSD--LDGLILQSEMGSPEVGTSFTNAMPTTTP 244
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/118 (64%), Positives = 95/118 (80%), Gaps = 3/118 (2%)
Query: 337 SSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 396
S G+ ++ +Q + S+ S+PPK++YIHVRARRGQAT+SHS+AER RREKISERMK LQD
Sbjct: 92 SVAGSNNSDEQSTKPSE-SEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQD 150
Query: 397 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI--EELLAKDVL 452
LVPGC+K+ GKA++LDEIINY+QSLQ QVEFLSMKL VN R + N E +KDV+
Sbjct: 151 LVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANMNPTNEGFPSKDVV 208
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 112/176 (63%), Gaps = 14/176 (7%)
Query: 278 DEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPS 337
D + TG E A L +K++ E K + E TE+ KG S
Sbjct: 87 DTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEKKIKVEAE-----TESSMKGK---S 138
Query: 338 STGNKSAG----KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKF 393
+ GN A K+ +G+ S+ K +YIHVRARRGQAT+ HSLAER RREKIS++MK+
Sbjct: 139 NMGNTEASSDTSKETSKGA--SENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKY 196
Query: 394 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAK 449
LQD+VPGC+KVTGKA MLDEIINYVQ LQRQVEFLSMKLA +NP L+ +E++ K
Sbjct: 197 LQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVEDVSVK 252
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 119/188 (63%), Gaps = 14/188 (7%)
Query: 261 ASGGDSDEAEFSGGGGQDEPSAVEG-TGGEPSAKGLS--SKKRKRNGQDIEFDQAKGGQS 317
A+ D++ + + D + V+ GE + L+ KKRK + + A+ G+
Sbjct: 75 AALSDNEPSSVTKKQSTDSSTVVDKFESGEQVTQKLAPMDKKRKSSFNSAQSKDARDGR- 133
Query: 318 SGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHS 377
G+ K N+ K D KP A K+ ++ +PP YIHVRARRGQAT+SHS
Sbjct: 134 -GKKQK-KCNNEVKEDKKPK------AEKKDQKKVPDQEPP-TGYIHVRARRGQATDSHS 184
Query: 378 LAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 437
LAERVRREKISERMK LQ LVPGC KVTGKA+MLDEIINYVQSLQ QVEFLSMKLA+VNP
Sbjct: 185 LAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNP 244
Query: 438 RL-DFNIE 444
DF ++
Sbjct: 245 LFYDFGMD 252
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 115/194 (59%), Gaps = 31/194 (15%)
Query: 299 KRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPP 358
K++R+ +D D AK +S A N N G + ++GNK+ G GK + S
Sbjct: 77 KKRRDSED---DSAKCVSTSNGGA--NAVNDSDG-KRTKASGNKNEGGDGKVEGEASSGK 130
Query: 359 KEE--------------YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
E YIHVRARRGQAT+SH LAER RREKISERMK LQDLVPGC+KV
Sbjct: 131 HAEQSSKPPPSDPPKQDYIHVRARRGQATDSHGLAERARREKISERMKILQDLVPGCNKV 190
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ----------- 453
GKA++LDEIINY+QSLQRQVEFLSMKL VN RL+ IE KD Q
Sbjct: 191 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEAFPPKDYGQQTFDLAGMPFV 250
Query: 454 SRAGPSSTLGFSPD 467
S+A + GFSP+
Sbjct: 251 SQATREPSRGFSPE 264
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/119 (67%), Positives = 90/119 (75%), Gaps = 5/119 (4%)
Query: 325 NTENQRKGDHKPSSTGNKSAGKQ---GKQGSQTSDPP--KEEYIHVRARRGQATNSHSLA 379
N N GD K S T S G++ GK +TSD P K++YIHVRARRGQAT+SHSLA
Sbjct: 67 NAVNDDGGDGKRSKTSGNSKGEENSSGKHAEETSDEPHPKKDYIHVRARRGQATDSHSLA 126
Query: 380 ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR 438
ER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSL QVEFLSMKL VN R
Sbjct: 127 ERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQVEFLSMKLEAVNSR 185
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 82/89 (92%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRRE+ISERM++LQ+LVPGC+KVTGKA MLDEIINYV
Sbjct: 158 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYV 217
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELL 447
QSLQ+QVEFLSMK+A NP ++FNI E L
Sbjct: 218 QSLQKQVEFLSMKIAASNPVVNFNIVEDL 246
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/96 (75%), Positives = 85/96 (88%), Gaps = 1/96 (1%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRRE+ISERM++LQ+LVPGCSKVTGKA MLDEIINYV
Sbjct: 147 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 206
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNI-EELLAKDVLQ 453
QSLQ+QVEFLSMK+A NP + F+I E+L + + Q
Sbjct: 207 QSLQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQ 242
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/117 (63%), Positives = 90/117 (76%), Gaps = 7/117 (5%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K Y+HVR RRGQAT+SHSLAER RREKI+ RMK LQ+LVPGC K++G A++LDEIIN+V
Sbjct: 167 KLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHV 226
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKD--VLQSRAGPSSTLGFSPDMPLVYP 473
Q+LQRQVE LSMKLA VNPR+DFN++ LLA D L PS+ + PLV+P
Sbjct: 227 QTLQRQVEILSMKLAAVNPRIDFNLDRLLAADGSSLMDSNLPSTMVT-----PLVWP 278
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 100/127 (78%), Gaps = 4/127 (3%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
+E+Y+HVRA+RGQATNSHSLAER RREKI+ERMK LQDLVPGC+K+TGKA+MLDEIINYV
Sbjct: 92 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYV 151
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQ- 477
QSLQRQ+EFLSMKL+ + P L+ +++ +D+L ++ S+ G++ V+ +++
Sbjct: 152 QSLQRQIEFLSMKLSAIGPGLNCDLD---LQDILCTQDASSAFPGYNLQTSNVHINLYRA 208
Query: 478 SQAGLMH 484
S+ G H
Sbjct: 209 SEEGFSH 215
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 101/151 (66%), Gaps = 5/151 (3%)
Query: 295 LSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQT 354
+ K++ R F+ A+ S + + ++ Q+KG+ + K + +
Sbjct: 117 MDKKRKNRTNASSSFNSAQ----SKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEKKV 172
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
+ P ++YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA MLDEI
Sbjct: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
Query: 415 INYVQSLQRQVEFLSMKLATVNPRL-DFNIE 444
INYVQ LQ QVEFLSMKLA+VNP DF ++
Sbjct: 233 INYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
Query: 342 KSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 401
+S G + +Q Q +P K+ YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC
Sbjct: 114 ESLGTETEQKKQQMEPTKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 172
Query: 402 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IE
Sbjct: 173 NKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIE 215
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
Query: 342 KSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 401
+S G + +Q Q +P K+ YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC
Sbjct: 114 ESLGTETEQKKQQMEPTKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 172
Query: 402 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IE
Sbjct: 173 NKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIE 215
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Query: 324 DNTENQRKGDHKPSSTGN-KSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERV 382
D + +K +H+ S+ N K K+ K GSQ PKE YIHV+ARRG+A N+HSLAERV
Sbjct: 163 DKADKTQKVEHRLSANFNTKPDSKKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERV 222
Query: 383 RREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN 442
RREKISERMK LQ LVPGC ++TGK V+LDEIINYVQSLQ+QVE LSMKLA+V
Sbjct: 223 RREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQVELLSMKLASVGLESSLE 282
Query: 443 IEELL 447
E++L
Sbjct: 283 AEQIL 287
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 100/127 (78%), Gaps = 4/127 (3%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
+E+Y+HVRA+RGQATNSHSLAER RREKI+ERMK LQDLVPGC+K+TGKA+MLDEIINYV
Sbjct: 118 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYV 177
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQ- 477
QSLQRQ+EFLSMKL+ + P L+ +++ +D+L ++ S+ G++ V+ +++
Sbjct: 178 QSLQRQIEFLSMKLSAIGPGLNCDLD---LQDILCTQDASSAFPGYNLQTSNVHINLYRA 234
Query: 478 SQAGLMH 484
S+ G H
Sbjct: 235 SEEGFSH 241
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 11/212 (5%)
Query: 269 AEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFD---QAKGGQSSGEAAKDN 325
A+FS G++ P P+ G + + K Q+ + + ++ G S A ++N
Sbjct: 101 AKFSVFAGENSPPPPGEARLIPAGTGSTLDRVKNEPQETDSNPCSSSRLGCISDPAVENN 160
Query: 326 TENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRRE 385
+ K + S ++ + D K Y+HVR RRGQAT+SHSLAER RRE
Sbjct: 161 IQRTAKRKEREKKAKGSSKKRKSAADETSGDGEKLPYVHVRVRRGQATDSHSLAERARRE 220
Query: 386 KISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEE 445
KI+ RMK LQ+LVPGC K++G A++LDEIIN+VQSLQRQVE LSMKLA VNPR+DF+++
Sbjct: 221 KINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQVEILSMKLAAVNPRIDFSLDS 280
Query: 446 LLAKDVLQSRAGPSSTLGFSPDM--PLVYPPV 475
LLA D G S P M PL++P +
Sbjct: 281 LLATD------GASLMDNNLPSMVTPLMWPEI 306
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 104/153 (67%), Gaps = 13/153 (8%)
Query: 288 GEP-SAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGK 346
EP S+ + +K K +G + Q+KG + ++ RK KP N+S
Sbjct: 69 AEPQSSTEIRKRKDKSDGSCMTSVQSKGTKRETKS--------RKSQKKPK--ANES--D 116
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
+ K+ +Q + YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTG
Sbjct: 117 EMKERTQEEEEAPVGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTG 176
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
KAVMLDEIINYVQSLQ QVEFLSMKLATV+P L
Sbjct: 177 KAVMLDEIINYVQSLQNQVEFLSMKLATVSPML 209
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 108/169 (63%), Gaps = 10/169 (5%)
Query: 295 LSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQT 354
+ K+R RNG QS A + + QRK + K+ ++ +
Sbjct: 100 VDKKRRTRNGSSF----TSNPQSKDTATEGKNKKQRKNNGGLKEEDKAKEEKKDQR--KC 153
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
+ P YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA+MLDEI
Sbjct: 154 PEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEI 213
Query: 415 INYVQSLQRQVEFLSMKLATVNPR---LDFNIEELLAK-DVLQSRAGPS 459
INYVQSLQ QVEFLSMKLA+VNP L +++ LL + + L S A PS
Sbjct: 214 INYVQSLQNQVEFLSMKLASVNPMFYDLATDLDTLLVRPEKLNSMASPS 262
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 100/127 (78%), Gaps = 4/127 (3%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
+E+Y+HVRA+RGQATNSHSLAER RREKI+ERMK LQDLVPGC+K+TGKA+MLDEIINYV
Sbjct: 118 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYV 177
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQ- 477
QSLQRQ+EFLSMKL+ + P L+ +++ +D+L ++ S+ G++ V+ +++
Sbjct: 178 QSLQRQIEFLSMKLSAIGPGLNCDLD---LQDILCTQDASSAFPGYNLQTSNVHINLYRA 234
Query: 478 SQAGLMH 484
S+ G H
Sbjct: 235 SEEGFSH 241
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 92/130 (70%), Gaps = 2/130 (1%)
Query: 337 SSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 396
+ +GN S K + + +PPK++YIHVRARRGQAT+SHSLAER RREKISERMK LQD
Sbjct: 102 TDSGNSS--KAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQD 159
Query: 397 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRA 456
LVPGC+KV GKA +LDEIINY+QSLQ QVEFLSMKL VN + I +KD
Sbjct: 160 LVPGCNKVIGKASVLDEIINYIQSLQHQVEFLSMKLEAVNSHMINGIVAFPSKDFGAQPY 219
Query: 457 GPSSTLGFSP 466
++ L F P
Sbjct: 220 NTAAGLTFDP 229
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 111/156 (71%), Gaps = 12/156 (7%)
Query: 315 GQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATN 374
G+ G A+ N N ++G G KS K+ K+GS+ +PPK+ YIHVRARRGQAT+
Sbjct: 97 GKKRGRKAR-NVSNSKEG-----VEGTKS--KKQKRGSK-EEPPKD-YIHVRARRGQATD 146
Query: 375 SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 434
SHSLAERVRREKISERM+ LQ+LVPGC KVTGKA+MLDEIINYVQ+LQ QVEFLSMKL +
Sbjct: 147 SHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQNQVEFLSMKLTS 206
Query: 435 VNPRLDFNIEELLAKDVLQSRAG-PSSTLGFSPDMP 469
++P + ++ L VL+S G P F+ MP
Sbjct: 207 ISPVV-YDFGSDLDGLVLRSEMGSPEVGTSFTNTMP 241
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/122 (61%), Positives = 93/122 (76%), Gaps = 1/122 (0%)
Query: 329 QRKGDHKPSSTGNKSAGKQGKQGSQTS-DPPKEEYIHVRARRGQATNSHSLAERVRREKI 387
++K + T GK ++TS + K +YIHVRARRG+AT+ HSLAER RREKI
Sbjct: 104 EKKKIKTEAETETSMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKI 163
Query: 388 SERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELL 447
S++MK LQD+VPGC+KVTGKA MLDEIINYVQSLQ+QVEFLSMKL+ +NP L+F+I EL
Sbjct: 164 SKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVLNPELEFHINELS 223
Query: 448 AK 449
K
Sbjct: 224 TK 225
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 113/195 (57%), Gaps = 12/195 (6%)
Query: 251 SHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFD 310
SH + V S ++ + G +E GE + ++ RKR + +
Sbjct: 69 SHHDHSSKVSLSDNETSLTKKQSTGSSTVVDKLET--GEQVTQEVTPVDRKRKTTNGSLN 126
Query: 311 QAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRG 370
A+ + K + + +GD K K+ K + + P Y+HVRARRG
Sbjct: 127 SAQS--KDVKEVKSKRQKKCRGDMK-------QEEKRPKAVKKVPEEPPTGYVHVRARRG 177
Query: 371 QATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
QAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA+MLDEIINYVQSLQ QVEFLSM
Sbjct: 178 QATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 237
Query: 431 KLATVNPRL-DFNIE 444
KLA+VNP DF +E
Sbjct: 238 KLASVNPMFYDFGME 252
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 94/120 (78%), Gaps = 1/120 (0%)
Query: 320 EAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLA 379
+AA+D+ ++ S G K A K+ ++ S T D P + YIHVRARRGQAT+SHSLA
Sbjct: 79 KAAEDSAHSKDSCKDGKSRRGKK-ASKEVEEKSTTEDEPPKGYIHVRARRGQATDSHSLA 137
Query: 380 ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
ERVRRE+ISERM+ LQ LVPGC KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 138 ERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVL 197
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/115 (64%), Positives = 91/115 (79%), Gaps = 1/115 (0%)
Query: 345 GKQGKQGSQTS-DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
GK ++TS + K +YIHVRARRG+AT+ HSLAER RREKIS++MK LQD+VPGC+K
Sbjct: 104 GKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNK 163
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGP 458
VTGKA MLDEIINYVQSLQ+QVEFLSMKL+ +NP L+ +I++L AK GP
Sbjct: 164 VTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQFQAYFTGP 218
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 100/127 (78%), Gaps = 4/127 (3%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
+E+Y+HVRA+RGQATNSHSLAER RREKI+ERMK LQDLVPGC+K+TGKA+MLDEIINYV
Sbjct: 122 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYV 181
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQ- 477
QSLQRQ+EFLSMKL+ + P L+ +++ +D+L ++ S+ G++ V+ +++
Sbjct: 182 QSLQRQIEFLSMKLSAIGPGLNCDLD---LQDILCTQDASSAFPGYNLQTSNVHINLYRA 238
Query: 478 SQAGLMH 484
S+ G H
Sbjct: 239 SEEGFSH 245
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 92/130 (70%), Gaps = 6/130 (4%)
Query: 315 GQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATN 374
G S GE + + G + S G ++ K+ P ++YIHVRARRGQAT+
Sbjct: 92 GASEGENKRQKIDEVCDGKAEAESLGTETEQKK------LQIEPTKDYIHVRARRGQATD 145
Query: 375 SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 434
SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL
Sbjct: 146 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 205
Query: 435 VNPRLDFNIE 444
VN R++ IE
Sbjct: 206 VNSRMNPGIE 215
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 96/128 (75%), Gaps = 12/128 (9%)
Query: 322 AKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAER 381
A+D TE+ KG S+T +S+ K +YIHVRARRG+AT+ HSLAER
Sbjct: 110 AEDETESSMKGKTNMSNTET------------SSEIQKPDYIHVRARRGEATDRHSLAER 157
Query: 382 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
RREKIS++MK LQD+VPGC+KVTGKA MLDEIINYVQSLQ+QVEFLSMKL+ +NP L+
Sbjct: 158 ARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELEC 217
Query: 442 NIEELLAK 449
+I++L AK
Sbjct: 218 HIDDLSAK 225
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 97/137 (70%), Gaps = 12/137 (8%)
Query: 322 AKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAER 381
A+D TE KG S+T +S+ K +YIHVRARRG+AT+ HSLAER
Sbjct: 110 AEDETEPSMKGKSNMSNTET------------SSEIQKPDYIHVRARRGEATDRHSLAER 157
Query: 382 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
RREKIS++MK LQD+VPGC+KVTGKA MLDEIINYVQSLQ+QVEFLSMKL+ +NP L+
Sbjct: 158 ARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELEC 217
Query: 442 NIEELLAKDVLQSRAGP 458
+I++L AK GP
Sbjct: 218 HIDDLSAKQFQAYFTGP 234
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 97/137 (70%), Gaps = 12/137 (8%)
Query: 322 AKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAER 381
A+D TE KG S+T +S+ K +YIHVRARRG+AT+ HSLAER
Sbjct: 106 AEDETEPSMKGKSNMSNTET------------SSEIQKPDYIHVRARRGEATDRHSLAER 153
Query: 382 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
RREKIS++MK LQD+VPGC+KVTGKA MLDEIINYVQSLQ+QVEFLSMKL+ +NP L+
Sbjct: 154 ARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELEC 213
Query: 442 NIEELLAKDVLQSRAGP 458
+I++L AK GP
Sbjct: 214 HIDDLSAKQFQAYFTGP 230
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 97/137 (70%), Gaps = 12/137 (8%)
Query: 322 AKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAER 381
A+D TE KG S+T +S+ K +YIHVRARRG+AT+ HSLAER
Sbjct: 110 AEDETEPSMKGKSNMSNTET------------SSEIQKPDYIHVRARRGEATDRHSLAER 157
Query: 382 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
RREKIS++MK LQD+VPGC+KVTGKA MLDEIINYVQSLQ+QVEFLSMKL+ +NP L+
Sbjct: 158 ARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELEC 217
Query: 442 NIEELLAKDVLQSRAGP 458
+I++L AK GP
Sbjct: 218 HIDDLSAKQFQAYFTGP 234
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 97/137 (70%), Gaps = 12/137 (8%)
Query: 322 AKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAER 381
A+D TE KG S+T +S+ K +YIHVRARRG+AT+ HSLAER
Sbjct: 110 AEDETEPSMKGKSNMSNTET------------SSEIQKPDYIHVRARRGEATDRHSLAER 157
Query: 382 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
RREKIS++MK LQD+VPGC+KVTGKA MLDEIINYVQSLQ+QVEFLSMKL+ +NP L+
Sbjct: 158 ARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELEC 217
Query: 442 NIEELLAKDVLQSRAGP 458
+I++L AK GP
Sbjct: 218 HIDDLSAKQFQAYFTGP 234
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 87/105 (82%)
Query: 354 TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
+S+ K +YIHVRARRG+AT+ HSLAER RREKIS++MK LQD+VPGC+KVTGKA MLDE
Sbjct: 114 SSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDE 173
Query: 414 IINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGP 458
IINYVQSLQ+QVEFLSMKL+ +NP L+ +I++L AK GP
Sbjct: 174 IINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQFQAYFTGP 218
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/143 (55%), Positives = 104/143 (72%), Gaps = 7/143 (4%)
Query: 325 NTENQRKGDH-KPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVR 383
+++N+++GD+ K +K K K+ ++ + YIHVRARRGQAT+SHSLAERVR
Sbjct: 115 HSKNEKQGDNGKKKKINSKLVAKDEKKANEEAPTG---YIHVRARRGQATDSHSLAERVR 171
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP-RLDF- 441
REKISERMK LQ LVPGC KVTGKA+MLDEIINYVQSLQ QVEFLSMKL ++NP DF
Sbjct: 172 REKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLTSLNPMYYDFG 231
Query: 442 -NIEELLAKDVLQSRAGPSSTLG 463
+++ L+ + QS +G + +
Sbjct: 232 MDLDALMVRPDDQSLSGLETQMA 254
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 94/129 (72%), Gaps = 5/129 (3%)
Query: 325 NTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRR 384
N N + + + SS N K + S+ S+PP ++YIHVR+RRGQAT+SHSLAER RR
Sbjct: 106 NENNDSRAEIEASSAAN---NKPAEPSSKPSEPPMQDYIHVRSRRGQATDSHSLAERARR 162
Query: 385 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN-- 442
E+I ERMK LQDLVPGC+KV GKA+ LDEIINY+QSLQ QVEFLSMKL VN R+ +
Sbjct: 163 ERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQVEFLSMKLEAVNSRMSTSPA 222
Query: 443 IEELLAKDV 451
IE L KD+
Sbjct: 223 IEGLHPKDL 231
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 106/161 (65%), Gaps = 9/161 (5%)
Query: 281 SAVEGTGGEP--SAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSS 338
SAV T +P SA S +RKR + D A SS ++ +D + Q +
Sbjct: 60 SAVVDTSPQPQGSAAAASPMERKRKPAE---DSAT--LSSAQSKEDCKQQQESKSRRGKR 114
Query: 339 TGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLV 398
NK A + K S T D YIHVRARRGQAT+SHSLAERVRRE+ISERM+ LQ LV
Sbjct: 115 PHNKEANTEEK--SATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALV 172
Query: 399 PGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
PGC KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 173 PGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVL 213
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 80/86 (93%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
+E+Y+HVRA+RGQATNSHSLAER RREKI+ERMK LQDLVPGC+K+TGKA+MLDEIINYV
Sbjct: 92 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYV 151
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIE 444
QSLQRQ+EFLSMKL+ + P L+ +++
Sbjct: 152 QSLQRQIEFLSMKLSAIGPGLNCDLD 177
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 106/161 (65%), Gaps = 9/161 (5%)
Query: 281 SAVEGTGGEP--SAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSS 338
SAV T +P SA S +RKR + D A SS ++ +D + Q +
Sbjct: 60 SAVVDTSPQPQGSAAAASPMERKRKPAE---DSAT--LSSAQSKEDCKQQQESKSRRGKR 114
Query: 339 TGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLV 398
NK A + K S T D YIHVRARRGQAT+SHSLAERVRRE+ISERM+ LQ LV
Sbjct: 115 PHNKEANTEEK--SATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALV 172
Query: 399 PGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
PGC KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 173 PGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVL 213
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Query: 326 TENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRRE 385
++N R G K KS+ K+ K +T P Y+HVRARRGQAT+SHSLAER RRE
Sbjct: 164 SQNNRSGKRKEFEKKVKSSTKKNKSSEETEKLP---YVHVRARRGQATDSHSLAERARRE 220
Query: 386 KISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEE 445
KI+ RMK LQ+LVPGC K+ G A++LDEIIN+VQSLQRQVE LSM+LA VNPR+DFN++
Sbjct: 221 KINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDT 280
Query: 446 LLAKD 450
+LA +
Sbjct: 281 ILASE 285
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 79/91 (86%), Gaps = 1/91 (1%)
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
S+ P YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA+MLDEI
Sbjct: 161 SEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEI 220
Query: 415 INYVQSLQRQVEFLSMKLATVNPRL-DFNIE 444
INYVQSLQ QVEFLSMKLA+VNP DF ++
Sbjct: 221 INYVQSLQNQVEFLSMKLASVNPMFYDFGMD 251
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 80/86 (93%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
+E+Y+HVRA+RGQATNSHSLAER RREKI+ERMK LQDLVPGC+K+TGKA+MLDEIINYV
Sbjct: 118 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYV 177
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIE 444
QSLQRQ+EFLSMKL+ + P L+ +++
Sbjct: 178 QSLQRQIEFLSMKLSAIGPGLNCDLD 203
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/134 (59%), Positives = 94/134 (70%), Gaps = 5/134 (3%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA+MLDEIINYVQSL
Sbjct: 145 YIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSL 204
Query: 422 QRQVEFLSMKLATVNPR-LDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQA 480
Q QVEFLSMKLA++NP DF ++ D L + +S +P +P + SQ
Sbjct: 205 QNQVEFLSMKLASLNPIFFDFRMD----LDGLMIQPETTSLSSITPTLPAMAQCSVVSQP 260
Query: 481 GLMHGALPGMGNPS 494
L+ P +P+
Sbjct: 261 ALIDTTPPATPSPA 274
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/93 (74%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
Query: 361 EYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQS 420
+Y+HVRARRG+AT+SHSLAER RREKISERMK+LQ+LVPGC+K+ GKA MLDEIINYVQS
Sbjct: 2 DYVHVRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQS 61
Query: 421 LQRQVEFLSMKLATVNPRLDF-NIEELLAKDVL 452
LQ+QVEFLSMK+A +N R+DF N+++LLAK +
Sbjct: 62 LQQQVEFLSMKVAALNHRVDFINVDDLLAKQMF 94
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 86/113 (76%), Gaps = 7/113 (6%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P YIHVRARRGQAT+SHSLAERVRRE+ISERMK LQ LVPGC K+TGKA+MLDEIINY
Sbjct: 167 PPAGYIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINY 226
Query: 418 VQSLQRQVEFLSMKLATVNPRL-DFNIEELLAKDVLQSRAGPSSTLGFSPDMP 469
VQSLQ QVEFLSMKLA+VNP L DF ++ +D R P SP +P
Sbjct: 227 VQSLQNQVEFLSMKLASVNPLLYDFGMD----RDAFMVR--PERLSSMSPPLP 273
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 82/89 (92%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
Y+HVRARRGQAT+SHSLAER RREKI++RMK LQ+LVPGC+K++G A++LDEIIN+VQSL
Sbjct: 174 YVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSL 233
Query: 422 QRQVEFLSMKLATVNPRLDFNIEELLAKD 450
Q QVEFLSM+LA VNPR+DFN++ +L+ +
Sbjct: 234 QCQVEFLSMRLAAVNPRIDFNLDSMLSAE 262
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/134 (59%), Positives = 94/134 (70%), Gaps = 5/134 (3%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA+MLDEIINYVQSL
Sbjct: 177 YIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSL 236
Query: 422 QRQVEFLSMKLATVNP-RLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQA 480
Q QVEFLSMKLA++NP DF ++ D L + +S +P +P + SQ
Sbjct: 237 QNQVEFLSMKLASLNPIFFDFRMD----LDGLMIQPETTSLSSITPTLPAMAQCSVVSQP 292
Query: 481 GLMHGALPGMGNPS 494
L+ P +P+
Sbjct: 293 ALIDTTPPATPSPA 306
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 87/107 (81%)
Query: 344 AGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
A K+ K + K Y+HVRARRGQAT+SHSLAER RREKI++RMK LQ+LVPGC+K
Sbjct: 161 ASKKSKNEGSQQEEEKLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNK 220
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
++G A++LDEIIN+VQ LQRQVE LSM+LA VNPR+DFN++ +L+ +
Sbjct: 221 ISGTALVLDEIINHVQFLQRQVEILSMRLAAVNPRIDFNLDSMLSAE 267
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 79/88 (89%)
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
K+ +TS PK +YIHVRARRGQAT+SHSLAER RREKIS++MK LQDLVPGC+K+TG+A
Sbjct: 21 KENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRA 80
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVN 436
MLDEIINYVQSLQRQVEF+SMKLA VN
Sbjct: 81 GMLDEIINYVQSLQRQVEFISMKLAAVN 108
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 80/90 (88%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
Y+HVRARRGQAT+SHSLAER RREKI+ RMK L++LVPGC K+ G A++LDEIIN+VQSL
Sbjct: 30 YVHVRARRGQATDSHSLAERARREKINARMKLLRELVPGCDKIQGTALVLDEIINHVQSL 89
Query: 422 QRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
QRQVE LSM+LA VNPR+DFN++ LLA +V
Sbjct: 90 QRQVEMLSMRLAAVNPRIDFNLDTLLASEV 119
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 66/92 (71%), Positives = 80/92 (86%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K Y+HVRARRGQAT+SHSLAER RREKI+ RMK LQ+LVPGC K+ G A++LDEIIN+V
Sbjct: 198 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHV 257
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
QSLQRQVE LSM+LA VNPR+DFN++ +LA +
Sbjct: 258 QSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 289
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 106/161 (65%), Gaps = 9/161 (5%)
Query: 281 SAVEGTGGEP--SAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSS 338
SAV T +P SA S +RKR + D A SS ++ +D + Q +
Sbjct: 60 SAVVDTSPQPQGSAAAASPMERKRKPAE---DSA--TLSSAQSKEDCKQQQESKSRRGKR 114
Query: 339 TGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLV 398
NK A + K S T D YIHVRARRGQAT+SHSLAERVRRE+ISERM+ LQ LV
Sbjct: 115 PHNKEANTEEK--SATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALV 172
Query: 399 PGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
PGC KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 173 PGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVL 213
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 66/92 (71%), Positives = 80/92 (86%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K Y+HVRARRGQAT+SHSLAER RREKI+ RMK LQ+LVPGC K+ G A++LDEIIN+V
Sbjct: 198 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHV 257
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
QSLQRQVE LSM+LA VNPR+DFN++ +LA +
Sbjct: 258 QSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 289
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/106 (67%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Query: 345 GKQGKQGSQTS-DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
GK ++TS + K +YIHVRARRG+AT+ HSLAER RREKIS++MK LQD+VPGC+K
Sbjct: 120 GKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNK 179
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAK 449
VTGKA MLDEIINYVQSLQ+QVEFLSMKL+ +NP L+ +I++L AK
Sbjct: 180 VTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAK 225
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/95 (76%), Positives = 80/95 (84%), Gaps = 3/95 (3%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA+MLDEIINY
Sbjct: 140 PPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINY 199
Query: 418 VQSLQRQVEFLSMKLATVNPR---LDFNIEELLAK 449
VQSLQ QVEFLSMKLA+VNP L +++ LL +
Sbjct: 200 VQSLQNQVEFLSMKLASVNPMFYDLATDLDTLLVR 234
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
Query: 314 GGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQAT 373
G + A D++ K G GK+ K + + PK YIHVRARRGQAT
Sbjct: 75 GRKRKASTADDSSATLSSAHSKDCKDGKSRRGKREKSSTDQEEAPKG-YIHVRARRGQAT 133
Query: 374 NSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 433
+SHSLAERVRRE+ISERM+ LQ LVPGC KVTGKA++LDEIINYVQSLQ QVEFLSM++A
Sbjct: 134 DSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIA 193
Query: 434 TVNPRL 439
+++P L
Sbjct: 194 SMSPVL 199
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/83 (81%), Positives = 77/83 (92%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRRE+ISERM++LQ+LVPGCSKVTGKA MLDEIINYV
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 199
Query: 419 QSLQRQVEFLSMKLATVNPRLDF 441
QSLQ+QVEFLSMK+A NP + F
Sbjct: 200 QSLQKQVEFLSMKIAASNPVVSF 222
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 80/91 (87%), Gaps = 3/91 (3%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC +VTGKA++LDEIINYVQSL
Sbjct: 142 YIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSL 201
Query: 422 QRQVEFLSMKLATVNP-RLDF--NIEELLAK 449
Q QVEFLSMKLA+VNP DF +++ LL +
Sbjct: 202 QNQVEFLSMKLASVNPIFFDFAMDLDTLLVR 232
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 80/92 (86%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K Y+HVRARRGQAT++HSLAER RREKI+ RMK LQ+LVPGC K+ G A++LDEIIN+V
Sbjct: 179 KLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHV 238
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
Q+LQRQVE LSM+LA VNPR+DFN++ +LA +
Sbjct: 239 QTLQRQVEMLSMRLAAVNPRIDFNLDSILASE 270
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 89/121 (73%), Gaps = 8/121 (6%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P YIHVRARRGQAT+SHSLAERVRREKISERM LQ LVPGC KVTGKA++L+EIINY
Sbjct: 112 PSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINY 171
Query: 418 VQSLQRQVEFLSMKLATVNPRL---DFNIEELLAK--DVLQSRAGPSSTLGFSPDMPLVY 472
VQSLQ QVEFLSMKLA+VNP L +++ LL + + S A P L P +PL
Sbjct: 172 VQSLQHQVEFLSMKLASVNPMLFDMAMDLDNLLVRPEQKVNSLASPPLVL---PCVPLCN 228
Query: 473 P 473
P
Sbjct: 229 P 229
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 128/227 (56%), Gaps = 46/227 (20%)
Query: 274 GGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQR--- 330
GGG DE S V T +A+ S+ + +N D S + +K+++ N+R
Sbjct: 25 GGGADEHSTV--TQLTAAARNHGSRIKMKNNND-------STTSEDDCSKNDSGNKRIRL 75
Query: 331 ---------------KGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNS 375
K S G+ ++ +Q + S+ S+PPK++YIHVRARRGQAT+S
Sbjct: 76 GGGGSTVENGGGGGLKAAEASSVAGSNNSDEQSTKPSE-SEPPKQDYIHVRARRGQATDS 134
Query: 376 HSLAERV----------------RREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 419
HS+AERV RREKISERMK LQDLVPGC+K+ GKA++LDEIINY+Q
Sbjct: 135 HSIAERVIHFSLCLSISYLLLVARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQ 194
Query: 420 SLQRQVEFLSMKLATVNPRLDFNI--EELLAKDVLQSRAGPSSTLGF 464
SLQ QVEFLSMKL VN R + N E +KD ++R LG+
Sbjct: 195 SLQHQVEFLSMKLEAVNSRANLNPTNEGFPSKDFQRTRCTWMRLLGW 241
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/100 (68%), Positives = 83/100 (83%), Gaps = 2/100 (2%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
+E+Y HVRA+RGQATNSHSLAER RREKI+ RMK LQDLVPGC+K+TGKA+MLDEIINYV
Sbjct: 148 REDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYV 207
Query: 419 QSLQRQVEFLSMKLATVNPRL--DFNIEELLAKDVLQSRA 456
QSLQRQVEFLSMKL+ + P D ++++ +D L +R
Sbjct: 208 QSLQRQVEFLSMKLSAIRPGFNRDLELQDVRLRDPLHTRC 247
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 82/98 (83%)
Query: 342 KSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 401
K K+ ++ S T D + YIHVRARRGQAT+SHSLAERVRRE+ISERM+ LQ LVPGC
Sbjct: 99 KRPNKETEEKSTTEDEATKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGC 158
Query: 402 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 159 DKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVL 196
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 89/117 (76%), Gaps = 3/117 (2%)
Query: 337 SSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 396
S GNK +Q + S + PK++YIHVRARRGQAT++HSLAER RREKISERMK LQD
Sbjct: 72 SVAGNK-LPQQTPKPSSSEQAPKQDYIHVRARRGQATDNHSLAERARREKISERMKILQD 130
Query: 397 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF--NIEELLAKDV 451
LVPGC+KV GKA +LD IINYVQSLQRQVEFLSMKL V+ RL +E +K+V
Sbjct: 131 LVPGCNKVIGKAFVLDGIINYVQSLQRQVEFLSMKLEAVSSRLSMKPTLECFPSKEV 187
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 86/104 (82%), Gaps = 3/104 (2%)
Query: 338 STGNKSAGKQGKQGSQTSDPPKEE--YIHVRARRGQATNSHSLAERVRREKISERMKFLQ 395
ST N+ GK+G+ + D +E YIHVRARRGQAT+SHSLAERVRRE+ISERM+ LQ
Sbjct: 92 STKNR-GGKRGRSSKEVEDDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQ 150
Query: 396 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
LVPGC KVTGKA++LDEIINYVQSLQ QVEFLSMK+A+++P L
Sbjct: 151 ALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVL 194
>gi|147797633|emb|CAN71939.1| hypothetical protein VITISV_038910 [Vitis vinifera]
Length = 381
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 103/181 (56%), Gaps = 27/181 (14%)
Query: 298 KKRKRNGQD----IEFDQAKGGQSSGEAAKDNTENQRKGDHK-PSSTGNKSAGKQGKQGS 352
KKRKR D + Q E E ++K + K ++ K G++ K S
Sbjct: 174 KKRKRLADDRSQFAHLKNMEAAQPKDECLGRQDERKQKAEQKIVANNCGKLIGEEVKMSS 233
Query: 353 QTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 412
QT + PKE+YIHVRA+RGQATNSHSLAER+ TGKAVMLD
Sbjct: 234 QTGEAPKEDYIHVRAKRGQATNSHSLAERI----------------------TGKAVMLD 271
Query: 413 EIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVY 472
EIINYVQSLQRQVEFLSMKLATV P ++ IE +L+ D+ S+ G + LGF P M Y
Sbjct: 272 EIINYVQSLQRQVEFLSMKLATVYPEMNVQIERILSSDIHHSKGGTAPILGFGPGMNSAY 331
Query: 473 P 473
P
Sbjct: 332 P 332
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/93 (75%), Positives = 79/93 (84%), Gaps = 2/93 (2%)
Query: 361 EYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQS 420
+YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QS
Sbjct: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
Query: 421 LQRQVEFLSMKLATVNPRLDFN--IEELLAKDV 451
LQ QVEFLSMKL VN R + N I+ +KDV
Sbjct: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDCFSSKDV 179
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/97 (71%), Positives = 81/97 (83%), Gaps = 2/97 (2%)
Query: 340 GNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVP 399
G S+G K+ + S P ++YIHVRARRGQAT+ HSLAER RREKISERMKFLQDL+P
Sbjct: 117 GETSSGGGSKETEEKS--PLKDYIHVRARRGQATDRHSLAERARREKISERMKFLQDLIP 174
Query: 400 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 436
GC+K+ GKA++LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 175 GCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEIVN 211
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 79/89 (88%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
Y+HVRARRGQAT++HSLAER RREKI+ RMK LQ+LVPGC K+ G A++LDEIIN+VQSL
Sbjct: 181 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 240
Query: 422 QRQVEFLSMKLATVNPRLDFNIEELLAKD 450
QRQVE LSM+LA VNPR++FN++ +LA +
Sbjct: 241 QRQVEMLSMRLAAVNPRVEFNLDSILASE 269
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 76/82 (92%)
Query: 360 EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 419
E Y+HVRARRGQAT+SHSLAER RREKI+ RMK LQ+LVPGCSK++G A++LDEIIN+VQ
Sbjct: 2 EAYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQ 61
Query: 420 SLQRQVEFLSMKLATVNPRLDF 441
SLQR+VEFLSM+LA VNPR+DF
Sbjct: 62 SLQREVEFLSMRLAAVNPRIDF 83
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/140 (52%), Positives = 97/140 (69%), Gaps = 9/140 (6%)
Query: 309 FDQAKGGQSSGE--AAKDNTENQ-------RKGDHKPSSTGNKSAGKQGKQGSQTSDPPK 359
D + G SSG+ A + + E+ R D + +S GK+ + + +
Sbjct: 46 LDTSPRGTSSGDNKACRKHKEDSGASFSSARSKDSNSKESSKRSGGKRDRSSKKVDEEEP 105
Query: 360 EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 419
+ YIHVRARRGQAT++HSLAERVRRE+ISERM+ LQ LVPGC KVTGKA++LDEIINYVQ
Sbjct: 106 KGYIHVRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQ 165
Query: 420 SLQRQVEFLSMKLATVNPRL 439
SLQ QVEFLSM++A+++P L
Sbjct: 166 SLQNQVEFLSMRIASLSPVL 185
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 122/241 (50%), Gaps = 43/241 (17%)
Query: 232 GASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPS 291
G SNG + + + E S ++ + V SG GGG QD
Sbjct: 24 GQSNGRRRRQQPRTEPPPPSEDDSSRPVSTSG---------GGGSQD------------- 61
Query: 292 AKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQG 351
L + KR F K +G D + R G K Q
Sbjct: 62 ---LIDSEAKR------FRANKSSDDNGSFRTDAEGDSRNG------------SKVVDQN 100
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
+PPK++YIHVRARRGQAT+SHSLAER RREKI+ERMK LQDLVPGC+KV GKA +L
Sbjct: 101 PPPPEPPKQDYIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVL 160
Query: 412 DEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLV 471
DEIINYVQ+L+RQVEFLSMKL VN ++ +E +KD + L F P P
Sbjct: 161 DEIINYVQALERQVEFLSMKLEAVNAHVNNGVETFPSKDFSAPTFNTAPGLTFDPQTPRE 220
Query: 472 Y 472
Y
Sbjct: 221 Y 221
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/93 (74%), Positives = 79/93 (84%)
Query: 361 EYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQS 420
+YIHVRARRGQAT+SHSLAER RREKISERMK LQD+VPGC+KVTGKA++LDEIINY+QS
Sbjct: 137 DYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQS 196
Query: 421 LQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
LQRQVEFLSMKL VN ++ E +KD Q
Sbjct: 197 LQRQVEFLSMKLEAVNLNMNPETEVFPSKDFGQ 229
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/92 (68%), Positives = 79/92 (85%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K Y+HVRARRGQAT++HSLAER RREKI+ RMK LQ+LVPGC K+ G ++LDEIIN+V
Sbjct: 179 KLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHV 238
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
Q+LQRQVE LSM+LA VNPR+DFN++ +LA +
Sbjct: 239 QTLQRQVEMLSMRLAAVNPRIDFNLDSILASE 270
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/110 (60%), Positives = 85/110 (77%)
Query: 330 RKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISE 389
R D + +S GK+ + + + + YIHVRARRGQAT++HSLAERVRRE+ISE
Sbjct: 76 RSKDSNSKESSKRSGGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISE 135
Query: 390 RMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
RM+ LQ LVPGC KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 136 RMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVL 185
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 86/110 (78%), Gaps = 4/110 (3%)
Query: 334 HKPSSTGNKSAGKQGKQGSQTSDPPKEE----YIHVRARRGQATNSHSLAERVRREKISE 389
H S +S K+G + ++S EE YIHVRARRGQAT+SHSLAERVRRE+ISE
Sbjct: 74 HSKDSNSKESTKKKGGKRDRSSKEVDEEEPKGYIHVRARRGQATDSHSLAERVRRERISE 133
Query: 390 RMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
RM+ LQ LVPGC KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 134 RMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVL 183
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 81/112 (72%)
Query: 361 EYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQS 420
+YIHVRARRGQAT+SHSLAER RREKISERMK LQD+VPGC+KV GKA +LDEIINY+QS
Sbjct: 46 DYIHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQS 105
Query: 421 LQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVY 472
LQRQVEFLSMKL T+N ++ KD + +L P P Y
Sbjct: 106 LQRQVEFLSMKLETINAHMNNATVAFPTKDFGAPPYNTAPSLTLDPQTPREY 157
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 82/96 (85%), Gaps = 4/96 (4%)
Query: 348 GKQGSQTSDPPKEE----YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
GK+G + + +EE YIHVRARRGQAT+SHSLAERVRRE+ISERM+ LQ LVPGC K
Sbjct: 90 GKRGRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDK 149
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
VTGKA++LDEIINYVQSLQ QVEFLSMK+A+++P L
Sbjct: 150 VTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVL 185
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 82/96 (85%), Gaps = 4/96 (4%)
Query: 348 GKQGSQTSDPPKEE----YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
GK+G + + +EE YIHVRARRGQAT+SHSLAERVRRE+ISERM+ LQ LVPGC K
Sbjct: 100 GKRGRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDK 159
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
VTGKA++LDEIINYVQSLQ QVEFLSMK+A+++P L
Sbjct: 160 VTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVL 195
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 83/103 (80%), Gaps = 5/103 (4%)
Query: 344 AGKQGKQGSQT-----SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLV 398
A K+GK + D K Y+HVRARRGQAT+SHSLAER RREKI+ RM+ L++LV
Sbjct: 167 AAKKGKTAEEKLAGGDGDDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELV 226
Query: 399 PGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
PGCSKV+G A++LDEIIN+VQSLQRQVE+LSM+LA VNPR+DF
Sbjct: 227 PGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 269
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/100 (73%), Positives = 82/100 (82%), Gaps = 1/100 (1%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA+MLDEII+Y
Sbjct: 173 PPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISY 232
Query: 418 VQSLQRQVEFLSMKLATVNPRL-DFNIEELLAKDVLQSRA 456
VQSLQ QVEFLSMKLA++NP + +F + DVL+ A
Sbjct: 233 VQSLQNQVEFLSMKLASLNPLMYEFGPGIDMHPDVLRQLA 272
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 82/101 (81%), Gaps = 8/101 (7%)
Query: 359 KEEYIHVRARRGQATNSHSLAERV--------RREKISERMKFLQDLVPGCSKVTGKAVM 410
K Y+HVRARRGQAT++HSLAERV RREKI+ RMK LQ+LVPGC K+ G A++
Sbjct: 123 KLPYVHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTALV 182
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
LDEIIN+VQ+LQRQVE LSM+LA VNPR+DFN++ +LA +V
Sbjct: 183 LDEIINHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILASEV 223
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 77/86 (89%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
+E+Y HVRA+RGQATNSHSLAER RREKI+ RMK LQDLVPGC+K+TGKA+MLDEIINYV
Sbjct: 148 REDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYV 207
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIE 444
QSLQRQVEFLSMKL+ + P + ++E
Sbjct: 208 QSLQRQVEFLSMKLSAIRPGFNRDLE 233
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 93/131 (70%), Gaps = 16/131 (12%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
Y+HVR RRGQAT+SHSLAER RREKI+ RMK LQ+LVPGC+K++G A++LD+IIN+VQSL
Sbjct: 189 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 248
Query: 422 QRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAG 481
Q +VE LSMKLA VNP +DFN++ LLA T G +P M +PP + A
Sbjct: 249 QNEVEILSMKLAAVNPVIDFNLDSLLA------------TEGVTP-MDCNFPP---TVAP 292
Query: 482 LMHGALPGMGN 492
+M +P GN
Sbjct: 293 VMWPEIPQNGN 303
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 88/113 (77%), Gaps = 9/113 (7%)
Query: 329 QRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKIS 388
+RK DH + +K AG G + P Y+HVRARRGQAT+SHSLAER RREKI+
Sbjct: 53 KRKADH-AADRASKDAG-----GGEDEKPA---YVHVRARRGQATDSHSLAERARREKIN 103
Query: 389 ERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
RM+ L++LVPGCSKV+G A++LDEIIN+VQSLQRQVE+LSM+LA VNPR+DF
Sbjct: 104 ARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 156
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 77/86 (89%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
D K Y+HVRARRGQAT+SHSLAER RREKI+ RM+ L++LVPGCSKV+G A++LDEII
Sbjct: 171 DDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEII 230
Query: 416 NYVQSLQRQVEFLSMKLATVNPRLDF 441
N+VQSLQRQVE+LSM+LA VNPR+DF
Sbjct: 231 NHVQSLQRQVEYLSMRLAAVNPRVDF 256
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 94/134 (70%), Gaps = 16/134 (11%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K Y+HVR RRGQAT+SHSLAER RREKI+ RMK LQ+LVPGC+K++G A++LD+IIN+V
Sbjct: 182 KLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHV 241
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQS 478
QSLQ +VE LSMKLA VNP +DFN++ LLA T G +P M +PP +
Sbjct: 242 QSLQNEVEILSMKLAAVNPVIDFNLDSLLA------------TEGVTP-MDCNFPP---T 285
Query: 479 QAGLMHGALPGMGN 492
A +M +P GN
Sbjct: 286 VAPVMWPEIPQNGN 299
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 90/121 (74%), Gaps = 4/121 (3%)
Query: 315 GQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATN 374
++ + K +T+ +RK + G + +GK + + ++PPK+ YIHVRARRGQAT+
Sbjct: 210 AETRAKKCKLSTDEERK---PAAGEGWRGSGKGKELVAADAEPPKD-YIHVRARRGQATD 265
Query: 375 SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 434
SHSLAERVRREKI ERMK LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE + L
Sbjct: 266 SHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEVRRVCLLC 325
Query: 435 V 435
+
Sbjct: 326 I 326
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 92/142 (64%), Gaps = 14/142 (9%)
Query: 337 SSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 396
+ +GN S K + + +PPK++YIHVRARRGQAT+SHSLAER RREKISERMK LQD
Sbjct: 102 TDSGNSS--KAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQD 159
Query: 397 LVPGCSKVTGKAVMLDEIINYVQSLQRQVE------------FLSMKLATVNPRLDFNIE 444
LVPGC+KV GKA +LDEIINY+QSLQ QVE FLSMKL VN + I
Sbjct: 160 LVPGCNKVIGKASVLDEIINYIQSLQHQVEFMFKYLIELFLQFLSMKLEAVNSHMINGIV 219
Query: 445 ELLAKDVLQSRAGPSSTLGFSP 466
+KD ++ L F P
Sbjct: 220 AFPSKDFGAQPYNTAAGLTFDP 241
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 80/112 (71%)
Query: 361 EYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQS 420
+YIHVRARRGQAT+SHSLAER RREKISERMK LQD+VPGC+KV GKA +LDEIINY+QS
Sbjct: 119 DYIHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQS 178
Query: 421 LQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVY 472
LQRQVEFLSMKL +N + KD + + +L P P Y
Sbjct: 179 LQRQVEFLSMKLEAINAHVSNATVAFPTKDFGVAPYNTAPSLTLDPQTPREY 230
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 103/167 (61%), Gaps = 15/167 (8%)
Query: 273 GGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKG 332
G P+ E E S+ L + + + + E D A + + AK+N
Sbjct: 30 GAATTTAPAIPEDASMETSSVVLDTSPQDKKRKPREEDTASLNSAHSKEAKEN------- 82
Query: 333 DHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMK 392
G K GK+ + + P + +IHVRARRGQAT+SHSLAERVRRE+ISERM+
Sbjct: 83 -------GRKRGGKKHSRDQMEEEAP-QGFIHVRARRGQATDSHSLAERVRRERISERMR 134
Query: 393 FLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
LQ LVPGC KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 135 MLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVL 181
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 79/92 (85%), Gaps = 3/92 (3%)
Query: 346 KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 405
K K G++ DPP YIHVRARRGQAT+SHSLAERVRREKIS+RM LQ LVPGC KVT
Sbjct: 122 KDKKIGAE--DPPTG-YIHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVT 178
Query: 406 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 437
GKA++LDEIINYVQSLQ QVEFLSMKLA+VNP
Sbjct: 179 GKALVLDEIINYVQSLQNQVEFLSMKLASVNP 210
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 82/100 (82%), Gaps = 1/100 (1%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA+MLDEII+Y
Sbjct: 173 PPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISY 232
Query: 418 VQSLQRQVEFLSMKLATVNPRL-DFNIEELLAKDVLQSRA 456
VQSLQ QVEFLSMKLA+++P + +F + DVL+ A
Sbjct: 233 VQSLQNQVEFLSMKLASLSPLMYEFGPGIDMHPDVLRQLA 272
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 85/113 (75%), Gaps = 8/113 (7%)
Query: 335 KPSSTGNKSAGKQGK--------QGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREK 386
+P +S ++GK + S D + YIHVRARRGQAT+SHSLAERVRRE+
Sbjct: 93 QPKDCKQESKSRRGKRPRKETEEKSSTDEDEASKGYIHVRARRGQATDSHSLAERVRRER 152
Query: 387 ISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
ISERM+ LQ LVPGC KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 153 ISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQVEFLSMRIASMSPVL 205
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/83 (75%), Positives = 76/83 (91%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K Y+HVRARRGQAT+SHSLAER RREKI+ RM+ L++LVPGCSKV+G A++LDEIIN+V
Sbjct: 101 KPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHV 160
Query: 419 QSLQRQVEFLSMKLATVNPRLDF 441
QSLQRQVE+LSM+LA VNPR+DF
Sbjct: 161 QSLQRQVEYLSMRLAAVNPRVDF 183
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 84/100 (84%), Gaps = 1/100 (1%)
Query: 338 STGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 397
ST + KQ K+ ++ + PK YIHVRARRGQAT+SHSL+ERVRRE+ISERM+ LQ L
Sbjct: 79 STRKRGGKKQDKETAEEEEEPKG-YIHVRARRGQATDSHSLSERVRRERISERMRMLQSL 137
Query: 398 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 437
VPGC KVTGKA++LDEIINYV+SLQ QVEFLSM++A+++P
Sbjct: 138 VPGCDKVTGKALILDEIINYVRSLQNQVEFLSMRIASLSP 177
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 78/89 (87%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
Y+HVR RRGQAT+SHSLAER RREKI+ RMK LQ+LVPGC+K++G A++LD+IIN+VQSL
Sbjct: 157 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 216
Query: 422 QRQVEFLSMKLATVNPRLDFNIEELLAKD 450
Q +VE LSMKLA VNP +DFN++ +LA +
Sbjct: 217 QHEVEILSMKLAAVNPIIDFNLDSILAAE 245
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/83 (75%), Positives = 76/83 (91%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K Y+HVRARRGQAT+SHSLAER RREKI+ RM+ L++LVPGCSKV+G A++LDEIIN+V
Sbjct: 140 KPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHV 199
Query: 419 QSLQRQVEFLSMKLATVNPRLDF 441
QSLQRQVE+LSM+LA VNPR+DF
Sbjct: 200 QSLQRQVEYLSMRLAAVNPRVDF 222
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/83 (77%), Positives = 76/83 (91%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K Y+HVRARRGQAT+SHSLAER RREKI+ RM+ L++LVPGCSKV+G A++LDEIIN+V
Sbjct: 151 KPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHV 210
Query: 419 QSLQRQVEFLSMKLATVNPRLDF 441
QSLQRQVE+LSM+LATVNPR DF
Sbjct: 211 QSLQRQVEYLSMRLATVNPRGDF 233
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/71 (91%), Positives = 69/71 (97%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+KVTGKA MLDEIINYV
Sbjct: 123 KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYV 182
Query: 419 QSLQRQVEFLS 429
QSLQRQVEFLS
Sbjct: 183 QSLQRQVEFLS 193
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 79/93 (84%), Gaps = 4/93 (4%)
Query: 356 DPPK----EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
D PK ++YIH+R+RRGQATNSHSLAERVRREKISERMK LQDLVPGC+KVTGKA++L
Sbjct: 99 DEPKNKSQKDYIHLRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVL 158
Query: 412 DEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
+ IINYVQSLQ QVE LS+KL +V R F+++
Sbjct: 159 ENIINYVQSLQSQVEILSVKLTSVLSRCHFDLQ 191
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 11/172 (6%)
Query: 275 GGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDH 334
G +D +A E T + +A S K R N +D + + SSG K++ + +RK
Sbjct: 54 GNKDVSAAEESTVTDLTAGWGSRKTRDLNSED-DSSKMVSSSSSGNELKESGDKKRKLCG 112
Query: 335 KPSSTGNKSAGKQG---------KQGSQTSDP-PKEEYIHVRARRGQATNSHSLAERVRR 384
S G+ S +G K Q + P P ++YIHVRARRGQAT+ HSLAER RR
Sbjct: 113 SESGNGDGSMRPEGETSSGGGGSKATEQKNKPEPPKDYIHVRARRGQATDRHSLAERARR 172
Query: 385 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 436
EKISE+M LQD++PGC+K+ GKA++LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 173 EKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVN 224
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 107/173 (61%), Gaps = 12/173 (6%)
Query: 275 GGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRK--- 331
G +D +A E T + +A K R N +D + + SSG K++ + +RK
Sbjct: 54 GNKDVSAAEESTVTDLTAGWGGRKTRDLNSED-DSSKMVSSSSSGNELKESGDKKRKLCG 112
Query: 332 -------GDHKPSSTGNKSAGKQGKQGSQTSDP-PKEEYIHVRARRGQATNSHSLAERVR 383
G +P + G K Q + P P ++YIHVRARRGQAT+ HSLAER R
Sbjct: 113 SESGNGDGSMRPEGETSSGGGGGSKATEQKNKPEPPKDYIHVRARRGQATDRHSLAERAR 172
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 436
REKISE+M LQD++PGC+K+ GKA++LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 173 REKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVN 225
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 100/179 (55%), Gaps = 44/179 (24%)
Query: 317 SSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSH 376
S+G+ K + G K + AG++ + S+ ++ K++YIHVRARRGQAT+SH
Sbjct: 109 SNGKRMKISRTPDENGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSH 168
Query: 377 SLAERV--------------------------------------------RREKISERMK 392
SLAERV RREKISERMK
Sbjct: 169 SLAERVMQFYTLLIFCFLVVPQMPKLKRIGLSWNSRSRCRCIGVSVYINARREKISERMK 228
Query: 393 FLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ +E KD+
Sbjct: 229 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPLKDL 287
>gi|3540186|gb|AAC34336.1| Hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 95/142 (66%), Gaps = 28/142 (19%)
Query: 325 NTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRR 384
N ++Q+K HK ++S K+ SQ+ + PKE YIH+RARRGQATNSHSLAER+
Sbjct: 172 NDQSQKK--HK----NDQSKETVNKESSQSEEAPKENYIHMRARRGQATNSHSLAERI-- 223
Query: 385 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP ++ +I+
Sbjct: 224 --------------------TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDID 263
Query: 445 ELLAKDVLQSRAGPSSTLGFSP 466
+LAKD+LQSR + TLG +P
Sbjct: 264 RILAKDLLQSRDRNTPTLGLNP 285
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 72/82 (87%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
YIHVRA+RGQA +SHSLAERVRREKISE+M LQ LVPGC KVTGKA+MLDEII+YVQSL
Sbjct: 154 YIHVRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIISYVQSL 213
Query: 422 QRQVEFLSMKLATVNPRLDFNI 443
Q QVEFLSMKLA++NP + +
Sbjct: 214 QNQVEFLSMKLASLNPMMMYEF 235
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
Query: 337 SSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 396
S T N S+ ++GK+ + E +HVRARRGQAT+SHS+AERVRR KI+ER+K LQD
Sbjct: 122 SLTKNNSS-RRGKRSKNREEEKDREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQD 180
Query: 397 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRA 456
+VPGC K G A MLDEIINYVQSLQ QVEFLSMKL + DFN E + + +++A
Sbjct: 181 IVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQRAKA 240
Query: 457 GPSSTLG 463
+ +G
Sbjct: 241 REAVEMG 247
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 82/109 (75%)
Query: 345 GKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
G++ K+ ++ + E IHVRA+RGQAT+SHSLAERVRREKI+E+++ LQDLVPGC K
Sbjct: 120 GRKRKRSNERENNKPREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKT 179
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
G AVMLD IINYVQSLQ Q+EFLSMKL+ + DFN E A + +Q
Sbjct: 180 MGMAVMLDVIINYVQSLQNQIEFLSMKLSAASTFYDFNSSEAEALETMQ 228
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 74/82 (90%), Gaps = 2/82 (2%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK--VTGKAVMLDEIINYVQ 419
Y+HVRARRGQAT+SHSLAER RREKI+ RMK LQ+LVPGCSK ++G A++LD+IIN+VQ
Sbjct: 29 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQ 88
Query: 420 SLQRQVEFLSMKLATVNPRLDF 441
SLQRQVEFLSM+LA V PR+DF
Sbjct: 89 SLQRQVEFLSMRLAAVTPRIDF 110
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 82/109 (75%)
Query: 345 GKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
G++ K+ ++ + E IHVRA+RGQAT+SHSLAERVRREKI+E+++ LQDLVPGC K
Sbjct: 103 GRKRKRSNERENNKPREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKT 162
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
G AVMLD IINYVQSLQ Q+EFLSMKL+ + DFN E A + +Q
Sbjct: 163 MGMAVMLDVIINYVQSLQNQIEFLSMKLSAASTFYDFNSSEAEALETMQ 211
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 82/109 (75%)
Query: 345 GKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
G++ K+ ++ + E IHVRA+RGQAT+SHSLAERVRREKI+E+++ LQDLVPGC K
Sbjct: 99 GRKRKRSNERENNKPREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKT 158
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
G AVMLD IINYVQSLQ Q+EFLSMKL+ + DFN E A + +Q
Sbjct: 159 MGMAVMLDVIINYVQSLQNQIEFLSMKLSAASTFYDFNSSEAEALETMQ 207
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 74/98 (75%)
Query: 345 GKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
GK+ + + D E +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K
Sbjct: 127 GKRAMKSIEKEDEKPREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKT 186
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN 442
G AVMLDEIINYVQSLQ QVEFLSMKL + DFN
Sbjct: 187 MGMAVMLDEIINYVQSLQNQVEFLSMKLTAASQYYDFN 224
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/100 (65%), Positives = 76/100 (76%)
Query: 345 GKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
GK+ K + + E +HVRARRGQAT+SHSLAERVRR KI+ER++ L+D+VPGC K
Sbjct: 128 GKRLKSLEKEEEKSTREVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKT 187
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
G AVMLDEIINYVQSLQ QVEFLSMKLA + DFN E
Sbjct: 188 MGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSE 227
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 342 KSAGKQGKQGSQTSDPPK-EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 400
K+ ++GK+ D K +E +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPG
Sbjct: 49 KNNSRRGKRTKSKEDDEKPKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 108
Query: 401 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
C K G AVMLDEIINYVQSLQ QVEFLSMKL + DFN E
Sbjct: 109 CYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSE 152
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 77/102 (75%)
Query: 361 EYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQS 420
E +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G AVMLDEIINYVQS
Sbjct: 153 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQS 212
Query: 421 LQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTL 462
LQ QVEFLSMKL + DFN E + V +++A + L
Sbjct: 213 LQNQVEFLSMKLTAASTFYDFNAETEAIETVQRAKAQETKEL 254
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 78/104 (75%)
Query: 341 NKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 400
N ++ ++GK D ++ +HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPG
Sbjct: 132 NVNSSRRGKGVKSNEDGKPKDVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 191
Query: 401 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
C K G AVMLDEIINYVQSLQ QVEFLSMKL + DFN E
Sbjct: 192 CYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNAE 235
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%)
Query: 332 GDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERM 391
D S++ +++ ++GK+ + + E +HVRARRGQAT+SHS+AERVRR KI+ER+
Sbjct: 103 SDQTLSTSSAQNSSRRGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERL 162
Query: 392 KFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
K LQD+VPGC K G A MLDEIINYVQSLQ QVEFLSMKL + DFN E + +
Sbjct: 163 KCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESM 222
Query: 452 LQSRAGPSSTLG 463
+++A + +G
Sbjct: 223 QKAKAREAVEMG 234
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 90/126 (71%), Gaps = 2/126 (1%)
Query: 338 STGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 397
ST N S+ ++GK+ + + E +HVRARRGQAT+SHS+AERVRR KI+ER+K LQD+
Sbjct: 121 STKNNSS-RRGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDI 179
Query: 398 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAG 457
VPGC K G A MLDEIINYVQSLQ QVEFLSMKL + DFN E A + +Q++A
Sbjct: 180 VPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFN-SETDAVESMQAKAR 238
Query: 458 PSSTLG 463
+ +G
Sbjct: 239 EAVEMG 244
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 132 bits (332), Expect = 4e-28, Method: Composition-based stats.
Identities = 61/67 (91%), Positives = 65/67 (97%)
Query: 360 EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 419
++YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC KVTGKAVMLDEIINYVQ
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQ 60
Query: 420 SLQRQVE 426
LQRQVE
Sbjct: 61 FLQRQVE 67
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
Query: 338 STGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 397
ST N S+ ++GK+ + + E +HVRARRGQAT+SHS+AERVRR KI+ER+K LQD+
Sbjct: 121 STKNNSS-RRGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDI 179
Query: 398 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAG 457
VPGC K G A MLDEIINYVQSLQ QVEFLSMKL + DFN E + + +++A
Sbjct: 180 VPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQKAKAR 239
Query: 458 PSSTLG 463
+ +G
Sbjct: 240 EAVEMG 245
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 97/148 (65%), Gaps = 16/148 (10%)
Query: 297 SKKRKRNGQDIEFDQAKGGQSSGEAAKD--NTENQRKGDHKPSSTGNKSAGKQGKQGSQT 354
SKKRK D ++ G S+ + +++ NT+N G K S G+ + G++ +
Sbjct: 97 SKKRKLENNDAY--ESSSGNSTPQVSENGINTKNN-NGKEKRSKKGDTNDGEKPR----- 148
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
E +HVRARRGQAT+SHS+AER+RR KI+ER++ LQD+VPGC K G AVMLDEI
Sbjct: 149 ------EVVHVRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEI 202
Query: 415 INYVQSLQRQVEFLSMKLATVNPRLDFN 442
INYVQSLQ QVEFLSMKL + DFN
Sbjct: 203 INYVQSLQNQVEFLSMKLTAASSYHDFN 230
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 93/131 (70%), Gaps = 4/131 (3%)
Query: 337 SSTGNK---SAGKQGKQGSQTSDPPK-EEYIHVRARRGQATNSHSLAERVRREKISERMK 392
S +G+K S+G+ + S ++ K +E +HVRARRGQAT+SHSLAERVRR KI+E+++
Sbjct: 124 SESGSKIKHSSGRGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLR 183
Query: 393 FLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVL 452
LQ++VPGC K G AVMLDEIINYVQSLQ QVEFLS+KL + DFN E + +
Sbjct: 184 CLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDALETMQ 243
Query: 453 QSRAGPSSTLG 463
++RA + LG
Sbjct: 244 RARASEAKELG 254
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 93/131 (70%), Gaps = 4/131 (3%)
Query: 337 SSTGNK---SAGKQGKQGSQTSDPPK-EEYIHVRARRGQATNSHSLAERVRREKISERMK 392
S +G+K S+G+ + S ++ K +E +HVRARRGQAT+SHSLAERVRR KI+E+++
Sbjct: 123 SESGSKIKHSSGRGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLR 182
Query: 393 FLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVL 452
LQ++VPGC K G AVMLDEIINYVQSLQ QVEFLS+KL + DFN E + +
Sbjct: 183 CLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDALETMQ 242
Query: 453 QSRAGPSSTLG 463
++RA + LG
Sbjct: 243 RARASEAKELG 253
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/77 (81%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 350 QGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 409
Q S PP E+YIHVRAR+GQAT+SHSL ERVRREKISERMK LQ+LVPGC+KVTGKA
Sbjct: 118 QNKANSKPP-EDYIHVRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAF 176
Query: 410 MLDEIINYVQSLQRQVE 426
MLDEIINYVQSLQRQVE
Sbjct: 177 MLDEIINYVQSLQRQVE 193
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 69/78 (88%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
++HVRARRG+AT+SHSLAER RREKISERMKFLQ LVPGC K+ GK ++LDEIINYV+SL
Sbjct: 105 FVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSL 164
Query: 422 QRQVEFLSMKLATVNPRL 439
Q QVEFL KLA+++P L
Sbjct: 165 QNQVEFLVGKLASISPML 182
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
+PPK+ YIHVRARRGQ +SH AERVRREKISE + LQDLVP S++TGKA LDEII
Sbjct: 13 EPPKD-YIHVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRITGKADSLDEII 71
Query: 416 NYVQSLQRQVEFLSMKLATVNPRLDFN 442
NYVQSL+RQVE L MKLAT+NPR++ N
Sbjct: 72 NYVQSLKRQVELLYMKLATINPRMESN 98
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/69 (85%), Positives = 66/69 (95%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K +YIHVRARRGQAT+SHSLAERVRRE+ISERM++LQ+LVPGCSKVTGKA MLDEIINYV
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 199
Query: 419 QSLQRQVEF 427
QSLQ+QVE
Sbjct: 200 QSLQKQVEV 208
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 69/78 (88%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
++HVRARRG+AT+SHSLAER RREKISERMKFLQ LVPGC K+ GK ++LDEIINYV+SL
Sbjct: 39 FVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSL 98
Query: 422 QRQVEFLSMKLATVNPRL 439
Q QVEFL KLA+++P L
Sbjct: 99 QNQVEFLVGKLASISPML 116
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 87/128 (67%), Gaps = 2/128 (1%)
Query: 337 SSTGNKSA-GKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ 395
S T N S GK+ K+ S P E +HVRA+RGQAT+SHSLAERVRR KI+E+++ LQ
Sbjct: 105 SKTKNSSGRGKRVKRNSIEDKKPNE-VVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQ 163
Query: 396 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSR 455
++VPGC K G A+MLDEIINYVQSLQ QVEFLSMKL + D N E + + ++R
Sbjct: 164 NIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTYYDLNSESDALETMQRAR 223
Query: 456 AGPSSTLG 463
A LG
Sbjct: 224 ASEVKELG 231
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 75/101 (74%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
+HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 423 RQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLG 463
QVEFLSMKL + DFN E + +++A + +G
Sbjct: 203 NQVEFLSMKLTAASSFYDFNSETDAVDSMQRAKARETVEMG 243
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Query: 345 GKQGKQGS-QTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
GK+ K+ + D + +HVRARRGQAT+SHSLAERVRR KI+E++K LQ++VPGC K
Sbjct: 131 GKRVKKNMMEEEDKKSTQVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYK 190
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
G A+MLDEIINYVQSLQ QVEFLSMKL + DFN E
Sbjct: 191 TMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTFYDFNSE 231
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 78/103 (75%), Gaps = 2/103 (1%)
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
G +T P ++ +HVRA+RGQAT+SHSLAERVRREKI+ER+K LQDLVPGC K G AVM
Sbjct: 92 GDETQKP--KDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVM 149
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
LD II+YV+SLQ Q+EFLSMKL+ + D N ++ D+ Q
Sbjct: 150 LDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQ 192
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 78/103 (75%), Gaps = 2/103 (1%)
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
G +T P ++ +HVRA+RGQAT+SHSLAERVRREKI+ER+K LQDLVPGC K G AVM
Sbjct: 92 GDETQKP--KDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVM 149
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
LD II+YV+SLQ Q+EFLSMKL+ + D N ++ D+ Q
Sbjct: 150 LDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQ 192
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 70/75 (93%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARRGQAT+SHSLAER RREKI+ RM+ L++LVPGCSKV+G A++LDEIIN+VQSLQRQVE
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 427 FLSMKLATVNPRLDF 441
+LSM+LA VNPR+DF
Sbjct: 61 YLSMRLAAVNPRVDF 75
>gi|125526611|gb|EAY74725.1| hypothetical protein OsI_02616 [Oryza sativa Indica Group]
Length = 467
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 108/192 (56%), Gaps = 24/192 (12%)
Query: 276 GQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQ-------AKGGQSSGEAAKDNTEN 328
G+D +++ SA L S++R + F Q AK + S +AA D
Sbjct: 185 GKDAATSIAKVLPLLSASPLQSQRRTSPETMVNFPQSPEPGTKAKKCKLSADAAGDEDTK 244
Query: 329 QRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKI- 387
GD G+ GK GK +PPK+ YIHVRARRGQAT+SHSLAERV +
Sbjct: 245 PVAGD-----AGHGGNGK-GKVLDAAGEPPKD-YIHVRARRGQATDSHSLAERVNTAGVY 297
Query: 388 --------SERMKFLQDLVPGCS-KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR 438
S + F + +VTGKAVMLDEIINYVQSLQRQVEFLSMKL+TVNP+
Sbjct: 298 AAIHNFVFSSILAFADAIAAVFHLQVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQ 357
Query: 439 LDFNIEELLAKD 450
LDF+++ + KD
Sbjct: 358 LDFDVDNFIPKD 369
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 79/108 (73%), Gaps = 5/108 (4%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
++HVRARRG+AT+SHSLAER RREKISERMK LQ LVPGC K+ GK ++LDEIINYV+SL
Sbjct: 105 FVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSL 164
Query: 422 QRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMP 469
Q QVEFL KLA+++P L E L + LQS + F P +P
Sbjct: 165 QNQVEFLVGKLASISPML-IGHEANLDSNTLQSE----NLCSFGPPLP 207
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 84/126 (66%)
Query: 337 SSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 396
S T N + + + D E +HVRA+RGQAT+SHSLAERVRR KI+E+++ LQ+
Sbjct: 99 SKTKNSCGRGKRVKRNMIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQN 158
Query: 397 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRA 456
+VPGC K G A+MLDEIINYVQSLQ QVEFLSMKL + DFN E + + + ++RA
Sbjct: 159 IVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLNAASTYYDFNSESDVLETMQRARA 218
Query: 457 GPSSTL 462
L
Sbjct: 219 SEVKEL 224
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 78/103 (75%), Gaps = 2/103 (1%)
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
G +T P ++ +HVRA+RGQAT+SHSLAERVRREKI+ER+K LQDLVPGC K G AVM
Sbjct: 35 GDETQKP--KDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVM 92
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQ 453
LD II+YV+SLQ Q+EFLSMKL+ + D N ++ D+ Q
Sbjct: 93 LDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQ 135
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 75/101 (74%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
+HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 1037 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1096
Query: 423 RQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLG 463
QVEFLSMKL + DFN E + +++A + +G
Sbjct: 1097 NQVEFLSMKLTAASSFYDFNSETDAVDSMQRAKARETVEMG 1137
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 68/78 (87%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
++HVRARRG+AT+SHSLAER RREKISERMK LQ LVPGC K+ GK ++LDEIINYV+SL
Sbjct: 105 FVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSL 164
Query: 422 QRQVEFLSMKLATVNPRL 439
Q QVEFL KLA+++P L
Sbjct: 165 QNQVEFLVGKLASISPML 182
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 79/119 (66%), Gaps = 12/119 (10%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
HVRARRGQAT+SHSLAERVRR KI+E+++ LQ++VPGC K G AVMLDEIINYVQSLQ
Sbjct: 156 HVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQH 215
Query: 424 QVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLG------------FSPDMPL 470
QVEFLS+KL + DFN E + + ++RA + L F P PL
Sbjct: 216 QVEFLSLKLTAASTYYDFNSETDAIETMQRARASEAKELARYKREEYGGISCFQPTWPL 274
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 68/82 (82%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
IHVRA+RGQAT+SHS+AERVRREKI+ +++ LQDLVPGC K G AVML+EIINYV SLQ
Sbjct: 147 IHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQ 206
Query: 423 RQVEFLSMKLATVNPRLDFNIE 444
QVEFLSM+LA + D N+E
Sbjct: 207 NQVEFLSMELAAASCSYDLNLE 228
>gi|30695832|ref|NP_567057.2| transcription factor bHLH60 [Arabidopsis thaliana]
gi|122214701|sp|Q3EAI1.1|BH060_ARATH RecName: Full=Transcription factor bHLH60; AltName: Full=Basic
helix-loop-helix protein 60; Short=AtbHLH60; Short=bHLH
60; AltName: Full=Transcription factor EN 91; AltName:
Full=bHLH transcription factor bHLH060
gi|332646181|gb|AEE79702.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 426
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 80/139 (57%), Gaps = 47/139 (33%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK--------------- 403
K Y+HVRARRGQAT+SHSLAER RREKI+ RMK LQ+LVPGC K
Sbjct: 198 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFG 257
Query: 404 --------------------------------VTGKAVMLDEIINYVQSLQRQVEFLSMK 431
+ G A++LDEIIN+VQSLQRQVE LSM+
Sbjct: 258 VHLLMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMR 317
Query: 432 LATVNPRLDFNIEELLAKD 450
LA VNPR+DFN++ +LA +
Sbjct: 318 LAAVNPRIDFNLDTILASE 336
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 81/113 (71%), Gaps = 6/113 (5%)
Query: 336 PSSTGNKSAGKQGKQGSQTSDPPK------EEYIHVRARRGQATNSHSLAERVRREKISE 389
P+++ N++ K GS+ + + EE IHVRA+RGQAT+SHS+AERVRREKI+
Sbjct: 113 PTASTNETKKKNNLGGSKKGENKEKEGDKAEEVIHVRAKRGQATDSHSIAERVRREKINN 172
Query: 390 RMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN 442
+++ LQDLVPGC + G AVML+EIINYV SLQ QVEFLSM+LA + D N
Sbjct: 173 KLRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQVEFLSMELAAASSSNDLN 225
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 66/82 (80%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
+HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 146 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQ 205
Query: 423 RQVEFLSMKLATVNPRLDFNIE 444
QVE LSMKL + DFN E
Sbjct: 206 NQVELLSMKLTAASSFYDFNSE 227
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 75/101 (74%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
+HVRARRGQAT+SHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 1026 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1085
Query: 423 RQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLG 463
QVEFLSMKL + DF+ E + +++A + +G
Sbjct: 1086 NQVEFLSMKLNAASSFYDFSSETDAVDSMQRAKARETVEMG 1126
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 123 bits (309), Expect = 2e-25, Method: Composition-based stats.
Identities = 59/62 (95%), Positives = 61/62 (98%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC KVTGKAVMLDEIINYVQSLQRQ
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 425 VE 426
VE
Sbjct: 61 VE 62
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 80/100 (80%), Gaps = 3/100 (3%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
K+++I VRARRGQAT+S S+AE VR EKI +RMK+LQDLVPGC KVTGK MLDEIINYV
Sbjct: 5 KQDFIRVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEIINYV 64
Query: 419 QSLQRQVEFLSMKLATVNPR-LD-FNIEELLA-KDVLQSR 455
QSLQ Q E LSMKL V+P LD +E LL+ ++VLQS+
Sbjct: 65 QSLQCQAESLSMKLGAVHPAPLDHLTLESLLSIEEVLQSQ 104
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 90/133 (67%), Gaps = 4/133 (3%)
Query: 335 KPSSTGNKSAGKQGK----QGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISER 390
K S +GNK G+ + + T + +E ++VRAR GQAT+S +LAERVRR KI+E+
Sbjct: 119 KVSESGNKFKHSSGRGKRVKNNVTEEEKAKEVVNVRARSGQATDSRNLAERVRRGKINEK 178
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
+++LQ++VPGC K G AVMLDEIINYVQSLQ QVEFLS+KL + DFN E +
Sbjct: 179 LRYLQNIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSLKLTAPSTFYDFNSEIDALET 238
Query: 451 VLQSRAGPSSTLG 463
+ ++RA + LG
Sbjct: 239 MQRARASEAKELG 251
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
D P +E IHVRARRGQAT++HS+AERVRREKI R++ LQDLVPGC K G AVMLDEII
Sbjct: 194 DKP-DEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEII 252
Query: 416 NYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
NYV SLQ QVEFLS +LA + +FN E
Sbjct: 253 NYVHSLQNQVEFLSRELAAASSLHNFNSE 281
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 77/114 (67%), Gaps = 23/114 (20%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P ++YIHVR RE+ISERMK LQ LVPGC+K+TGKA+MLDEIINY
Sbjct: 197 PAKDYIHVR-----------------RERISERMKLLQSLVPGCNKITGKALMLDEIINY 239
Query: 418 VQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV------LQSRAGPSSTLGFS 465
VQSLQRQVEFLSMKLAT+NP+LDF+ + +KD+ + P++T FS
Sbjct: 240 VQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDMSHMPVPAYPSSDPTTTTAFS 293
>gi|224077848|ref|XP_002305434.1| predicted protein [Populus trichocarpa]
gi|222848398|gb|EEE85945.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 81/116 (69%), Gaps = 3/116 (2%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
MK+LQDLVPGC+ +TGKA MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFNI+ L AK+
Sbjct: 1 MKYLQDLVPGCNNITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNLFAKE 60
Query: 451 VLQSRAGPSSTLGFSPDMP-LVYPPVHQSQAGLMHGALPGMG-NPSDI-LRRTINS 503
+ + +G SPDM Y + +Q L+ MG NP D+ LRRT ++
Sbjct: 61 AFPACSTNFPAIGMSPDMTNAAYLQFNPAQQQLVSCCGLDMGINPPDMGLRRTTST 116
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 65/74 (87%)
Query: 360 EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 419
+E IHVRA+RGQAT+SHS+AER+RREKI+ +++ LQD+VPGC K G AVML+EIINYV
Sbjct: 153 KEVIHVRAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVH 212
Query: 420 SLQRQVEFLSMKLA 433
SLQ QVEFLSM+LA
Sbjct: 213 SLQNQVEFLSMELA 226
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 71/94 (75%), Gaps = 6/94 (6%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV-----TGKAVM 410
D P +E IHVRARRGQAT++HS+AERVRREKI R++ LQDLVPGC KV G AVM
Sbjct: 140 DKP-DEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVM 198
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 444
LDEIINYV SLQ QVEFLS +LA + +FN E
Sbjct: 199 LDEIINYVHSLQNQVEFLSRELAAASSLHNFNSE 232
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 66/75 (88%)
Query: 348 GKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGK 407
G + ++ K++YIHVRARRG+AT+SHSLAERVRRE+ISERMK+L+ LVPGC+K+TGK
Sbjct: 133 GNGSKEKNEDKKQDYIHVRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGK 192
Query: 408 AVMLDEIINYVQSLQ 422
A MLDEIINYVQSLQ
Sbjct: 193 AGMLDEIINYVQSLQ 207
>gi|293336149|ref|NP_001169231.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975699|gb|ACN32037.1| unknown [Zea mays]
gi|414885895|tpg|DAA61909.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 332
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 91/144 (63%), Gaps = 2/144 (1%)
Query: 263 GGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLS-SKKRKRNGQDIEFDQAKGGQSSGEA 321
G D E E G S+ G+ S+KG S SKKR+R + + DQ + ++
Sbjct: 149 GSDKGEPELGRNGHDGVLSSEAAAAGDCSSKGTSDSKKRRRPNEVMGGDQVQSSNLPADS 208
Query: 322 AKDNTENQRKGDHKPSSTGNKSAGK-QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAE 380
A ++ ++ KG+ +T GK +GK +TS+ KE+YIHVRARRGQATNSHSLAE
Sbjct: 209 ANESVHSKDKGEESSLATTTTGPGKSKGKGARETSESQKEDYIHVRARRGQATNSHSLAE 268
Query: 381 RVRREKISERMKFLQDLVPGCSKV 404
R+RREKISERMK LQDLVPGCSKV
Sbjct: 269 RLRREKISERMKLLQDLVPGCSKV 292
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 21/32 (65%)
Query: 132 FLPNAPGMFPQSLSQFPADSAFIERAARFSSF 163
FL PG PQ L+ FP DS FIERAAR S F
Sbjct: 77 FLAPVPGFLPQGLAHFPVDSGFIERAARASCF 108
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 74/98 (75%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RARRGQAT+SH+LAERVRR KI+E++++LQ++VPGC K AVMLDEIINYVQSLQ QV
Sbjct: 152 RARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQV 211
Query: 426 EFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLG 463
EFLS++L + DFN E + + +SRA + LG
Sbjct: 212 EFLSLELTAASTFYDFNSEIDAFETMQRSRAYEAKELG 249
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 67/102 (65%), Gaps = 29/102 (28%)
Query: 360 EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCS----------------- 402
++YIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGCS
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTH 332
Query: 403 ------------KVTGKAVMLDEIINYVQSLQRQVEFLSMKL 432
KVTGKAVMLDEIINYVQSLQ QVE + L
Sbjct: 333 AYFNFQRLLDLVKVTGKAVMLDEIINYVQSLQCQVEVRAYDL 374
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 80/116 (68%), Gaps = 3/116 (2%)
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
K+ + P Y+HVRARRG+AT+ HSLAERVRR+KIS RMK LQ LVPGC K+TGKA
Sbjct: 148 KEKKVAKEHPLTGYVHVRARRGEATDPHSLAERVRRKKISVRMKLLQSLVPGCDKLTGKA 207
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVN---PRLDFNIEELLAKDVLQSRAGPSST 461
+LDEII +V SLQ QVEFL+ K + N +++ + L+AK++ S SS+
Sbjct: 208 QILDEIIRHVLSLQNQVEFLAAKFTSENGIANEVNYEMNTLVAKELYNSELQESSS 263
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 80/119 (67%), Gaps = 5/119 (4%)
Query: 330 RKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEE---YIHVRARRGQATNSHSLAERVRREK 386
++ P S+ + + +Q Q PP E Y+HVRARRG+AT+SHSLAERVRRE+
Sbjct: 39 KREKRNPKSSVSTNLERQRPTKRQKKAPPLEHPTGYVHVRARRGEATDSHSLAERVRRER 98
Query: 387 ISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL--DFNI 443
IS +MK LQ LVPGC ++TGKA++LDEII YVQSL+ ++ L +L VN + DF +
Sbjct: 99 ISAKMKLLQSLVPGCDQITGKALILDEIIRYVQSLKDRIGSLEAELVLVNEMVINDFKV 157
>gi|388493796|gb|AFK34964.1| unknown [Lotus japonicus]
gi|388513685|gb|AFK44904.1| unknown [Lotus japonicus]
Length = 180
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 63/78 (80%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
MK+LQDLVPGC+K+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFNI+EL K+
Sbjct: 1 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKE 60
Query: 451 VLQSRAGPSSTLGFSPDM 468
V + A ++G DM
Sbjct: 61 VFPACAQSFPSIGMQSDM 78
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 318 SGEAAKDNTENQR-KGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSH 376
S A K E++R K + S + N + K+ + P Y+HVRARRG+AT+SH
Sbjct: 113 SSPAIKVKRESKRQKLNLNSSVSRNAKRVRPAKKQKKVPVEPPTGYVHVRARRGEATDSH 172
Query: 377 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
SLAERVRREKIS RMK LQ LVPGC K+TGKA++LDEII+YVQ L+ +V+
Sbjct: 173 SLAERVRREKISSRMKLLQSLVPGCDKITGKALVLDEIISYVQFLKDRVQV 223
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 64/85 (75%)
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
+++VRARRG+A +SHSLAERVRR+KIS +MK LQ LVPGC K TGK +LD IINY+ SL
Sbjct: 133 FVYVRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINYIHSL 192
Query: 422 QRQVEFLSMKLATVNPRLDFNIEEL 446
Q QV+ L +LA V+P D N L
Sbjct: 193 QDQVKSLMEELALVDPTFDVNYLAL 217
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 86/148 (58%), Gaps = 23/148 (15%)
Query: 337 SSTGNKSAGKQGK--QGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFL 394
S + K +G +GK + +T + +E +HVRARRGQAT+SHSLAERVRR KI+E++K L
Sbjct: 125 SGSKTKLSGGRGKRVKSYETEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLKCL 184
Query: 395 QDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQS 454
Q++VPGC K G AVMLDEIINY FLS+KL + DFN E + + ++
Sbjct: 185 QNIVPGCYKTMGMAVMLDEIINY---------FLSLKLTAASTYYDFNSEADDLETMQRA 235
Query: 455 RAGPSSTLG------------FSPDMPL 470
RA + L F P PL
Sbjct: 236 RASEAKELARYKRDGYGGISCFQPTWPL 263
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 59/67 (88%)
Query: 360 EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 419
+E IHVRA+RGQAT+SHSLAERVRRE+I+E+++ LQDLVPGC K G AVMLD IINYVQ
Sbjct: 116 KEVIHVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQ 175
Query: 420 SLQRQVE 426
SLQ Q+E
Sbjct: 176 SLQNQIE 182
>gi|414886198|tpg|DAA62212.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 172
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAK 449
MKFLQDLVPGC+KV GKA+MLDEIINYVQSLQ+QVEFLSMKLATVNP+LDF N+ LL K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 450 DVLQSRAGPSSTLGF 464
D+ Q GPS+ F
Sbjct: 61 DMYQP-CGPSANSVF 74
>gi|414886199|tpg|DAA62213.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 162
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAK 449
MKFLQDLVPGC+KV GKA+MLDEIINYVQSLQ+QVEFLSMKLATVNP+LDF N+ LL K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 450 DVLQSRAGPSSTLGF 464
D+ Q GPS+ F
Sbjct: 61 DMYQP-CGPSANSVF 74
>gi|414886200|tpg|DAA62214.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 161
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 62/71 (87%), Gaps = 2/71 (2%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF-NIEELLAK 449
MKFLQDLVPGC+KV GKA+MLDEIINYVQSLQ+QVEFLSMKLATVNP+LDF N+ LL K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 450 DVLQSRAGPSS 460
D+ Q GPS+
Sbjct: 61 DMYQP-CGPSA 70
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 104 bits (260), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/60 (81%), Positives = 55/60 (91%)
Query: 380 ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
ERVRRE+I ERMK+LQ LVPGC+K+TGKA ML+EIINYVQSLQRQVEFLSMKLA VNP +
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSMKLAGVNPEI 62
>gi|223948547|gb|ACN28357.1| unknown [Zea mays]
Length = 188
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/55 (85%), Positives = 51/55 (92%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEE 445
MK LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKL+TVNPRL+ ++
Sbjct: 1 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLELGADD 55
>gi|225456606|ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isoform 2 [Vitis vinifera]
Length = 262
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 70/108 (64%), Gaps = 22/108 (20%)
Query: 344 AGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
AG++ + S+ ++ K++YIHVRARRGQAT+SHSLAERV
Sbjct: 136 AGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERV--------------------- 174
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDV 451
GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ +E KD+
Sbjct: 175 -IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPLKDL 221
>gi|116309555|emb|CAH66617.1| OSIGBa0144C23.3 [Oryza sativa Indica Group]
Length = 157
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 62/81 (76%), Gaps = 6/81 (7%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
MK LQ LVPGC+K+TGKA+MLDEIINYVQSLQRQVEFLSMKLAT+NP+LDF+ + +KD
Sbjct: 1 MKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKD 60
Query: 451 V------LQSRAGPSSTLGFS 465
+ + P++T FS
Sbjct: 61 MSHMPVPAYPSSDPTTTTAFS 81
>gi|413951547|gb|AFW84196.1| putative HLH DNA-binding domain superfamily protein, partial [Zea
mays]
Length = 236
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 55/64 (85%), Gaps = 2/64 (3%)
Query: 394 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN--IEELLAKDV 451
LQDLVPGC+KV GKAVMLDEIINYVQSLQRQVEFLSMKLATVNP+LDFN LL KDV
Sbjct: 121 LQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKDV 180
Query: 452 LQSR 455
+R
Sbjct: 181 RGTR 184
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 74/116 (63%), Gaps = 10/116 (8%)
Query: 334 HKPSSTGNKSAGKQ-GKQG----SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKIS 388
H P +G + G Q G Q S TS P + VRARRGQAT+ HS+AER+RRE+I+
Sbjct: 63 HHPQESGGPTMGSQEGLQAQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIA 122
Query: 389 ERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK----LATVNPRLD 440
ERMK LQ+LVP +K T KA MLDEII YV+ LQ QV+ LSM V PRL+
Sbjct: 123 ERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGAVGPRLN 177
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 75/116 (64%), Gaps = 10/116 (8%)
Query: 334 HKPSSTGNKSAGKQ---GKQG--SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKIS 388
H P +G + G Q QG S TS P + VRARRGQAT+ HS+AER+RRE+I+
Sbjct: 63 HHPQESGGPTMGSQEGLQPQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIA 122
Query: 389 ERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK----LATVNPRLD 440
ERMK LQ+LVP +K T KA MLDEII YV+ LQ QV+ LSM +V PRL+
Sbjct: 123 ERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLN 177
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 54/59 (91%)
Query: 381 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
+VRRE+ISERM+ LQ LVPGC KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 77 KVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVL 135
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 341 NKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 400
N++ G G T+ + + VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP
Sbjct: 223 NQTPAASGSAGGGTTPAAQPKQQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPN 282
Query: 401 CSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
+K T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 283 ANK-TDKASMLDEIIDYVKFLQLQVKVLSM 311
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 60/74 (81%), Gaps = 3/74 (4%)
Query: 357 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 416
PP++ VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+
Sbjct: 177 PPRQ--TRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIID 233
Query: 417 YVQSLQRQVEFLSM 430
YV+ LQ QV+ LSM
Sbjct: 234 YVKFLQLQVKVLSM 247
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P + VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 253 PAQPRQRVRARRGQATHPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDY 311
Query: 418 VQSLQRQVEFLSM 430
V+ LQ QV+ LSM
Sbjct: 312 VKFLQLQVKVLSM 324
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 3/74 (4%)
Query: 357 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 416
PP+++ VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+
Sbjct: 198 PPRQQ--RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIID 254
Query: 417 YVQSLQRQVEFLSM 430
YV+ LQ QV+ LSM
Sbjct: 255 YVKFLQLQVKVLSM 268
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 3/74 (4%)
Query: 357 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 416
PP+++ VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+
Sbjct: 198 PPRQQ--RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIID 254
Query: 417 YVQSLQRQVEFLSM 430
YV+ LQ QV+ LSM
Sbjct: 255 YVKFLQLQVKVLSM 268
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 50/59 (84%)
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 405
Q K+ S D KE Y+H+RA+RGQATNSHSLAER+RR+KISERMK LQDLVPGC+KVT
Sbjct: 120 QSKEDSSDGDGTKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKVT 178
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P + VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 30 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDY 88
Query: 418 VQSLQRQVEFLSM 430
V+ LQ QV+ LSM
Sbjct: 89 VKFLQLQVKVLSM 101
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P + VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 249 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDY 307
Query: 418 VQSLQRQVEFLSM 430
V+ LQ QV+ LSM
Sbjct: 308 VKFLQLQVKVLSM 320
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P + VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 131 PPQSRTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDY 189
Query: 418 VQSLQRQVEFLSM 430
V+ LQ QV+ LSM
Sbjct: 190 VKFLQLQVKVLSM 202
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P + VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 189 PAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDY 247
Query: 418 VQSLQRQVEFLSM 430
V+ LQ QV+ LSM
Sbjct: 248 VKFLQVQVKVLSM 260
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P + VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 192 PAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDY 250
Query: 418 VQSLQRQVEFLSM 430
V+ LQ QV+ LSM
Sbjct: 251 VKFLQVQVKVLSM 263
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P + VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 97 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDY 155
Query: 418 VQSLQRQVEFLSM 430
V+ LQ QV+ LSM
Sbjct: 156 VKFLQLQVKVLSM 168
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 225 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 283
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 284 VKVLSM 289
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 60/74 (81%), Gaps = 4/74 (5%)
Query: 357 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 416
PP++ VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEI++
Sbjct: 235 PPRQR---VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVD 290
Query: 417 YVQSLQRQVEFLSM 430
YV+ LQ QV+ LSM
Sbjct: 291 YVKFLQLQVKVLSM 304
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 60/74 (81%), Gaps = 4/74 (5%)
Query: 357 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 416
PP++ VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEI++
Sbjct: 234 PPRQR---VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVD 289
Query: 417 YVQSLQRQVEFLSM 430
YV+ LQ QV+ LSM
Sbjct: 290 YVKFLQLQVKVLSM 303
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 354 TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
T P + +RARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDE
Sbjct: 127 TVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDE 185
Query: 414 IINYVQSLQRQVEFLSM 430
II+YV+ LQ QV+ LSM
Sbjct: 186 IIDYVEFLQLQVKVLSM 202
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 136 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 194
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 195 VKVLSM 200
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 60/73 (82%), Gaps = 4/73 (5%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
PK++ VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 200 PKQK---VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDY 255
Query: 418 VQSLQRQVEFLSM 430
V+ LQ QV+ LSM
Sbjct: 256 VKFLQLQVKVLSM 268
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 253 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 311
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 312 VKVLSM 317
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 354 TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
T P + +RARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDE
Sbjct: 127 TVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDE 185
Query: 414 IINYVQSLQRQVEFLSM 430
II+YV+ LQ QV+ LSM
Sbjct: 186 IIDYVKFLQLQVKVLSM 202
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 88
Query: 424 QVEFLSM 430
QV+ LSM
Sbjct: 89 QVKVLSM 95
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 89
Query: 424 QVEFLSM 430
QV+ LSM
Sbjct: 90 QVKVLSM 96
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 354 TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
T P + +RARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDE
Sbjct: 127 TVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDE 185
Query: 414 IINYVQSLQRQVEFLSM 430
II+YV+ LQ QV+ LSM
Sbjct: 186 IIDYVKFLQLQVKVLSM 202
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 174 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 232
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 233 VKVLSM 238
>gi|297820582|ref|XP_002878174.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324012|gb|EFH54433.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 76/153 (49%), Gaps = 62/153 (40%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRRE------------------------KISERMKF- 393
K Y+HVRARRGQAT+SHSLAER RRE KI ++ F
Sbjct: 198 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFG 257
Query: 394 -------------------LQDLVPGCS-----------------KVTGKAVMLDEIINY 417
+DL+ CS + G A++LDEIIN+
Sbjct: 258 VHLLMISGKKAVNFLWKVSCEDLI-DCSFNPLGFRLTRHSLAASFTIQGTALVLDEIINH 316
Query: 418 VQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
VQSLQRQVE LSM+LA VNPR+DFN++ +LA +
Sbjct: 317 VQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 349
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RARRGQAT+ HS+AER+RREKISERMK LQDLVP +K KA MLDEII+YV+ LQ Q
Sbjct: 315 TRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 373
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 374 VKVLSM 379
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 197 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 255
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 256 VKVLSM 261
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP SKV KA MLDEII YV+ LQ
Sbjct: 350 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKV-DKASMLDEIIEYVKFLQL 408
Query: 424 QVEFLSM 430
QV+ LSM
Sbjct: 409 QVKVLSM 415
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RREKIS+RMK LQDLVP +K KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 378
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+ISER+K LQ+LVP C+K T +A MLDEI++YV+ L+ Q
Sbjct: 142 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDYVKFLRLQ 200
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 201 VKVLSM 206
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRARRGQAT+ HS+AER+RRE+I+ERMK LQDLVP +K T KA MLDEI++YV+ LQ
Sbjct: 3 RVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANK-TDKASMLDEIVDYVKFLQL 61
Query: 424 QVEFLSM 430
QV+ LSM
Sbjct: 62 QVKVLSM 68
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 344 AGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
AG G+ + P + VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K
Sbjct: 196 AGPSSCGGAAAAAAPGQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK 255
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLSM 430
T KA MLDEII+YV+ LQ QV+ LS+
Sbjct: 256 -TDKASMLDEIIDYVKFLQLQVKVLSV 281
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 11/97 (11%)
Query: 334 HKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKF 393
H ++TG +A Q P + VRARRGQAT+ HS+AER+RRE+I+ERMK
Sbjct: 37 HNQTNTGTVAAIPQ----------PPQVRPRVRARRGQATDPHSIAERLRRERIAERMKA 86
Query: 394 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 87 LQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 122
>gi|326521778|dbj|BAK00465.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 6/69 (8%)
Query: 353 QTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 412
Q PPK+++IHVRARRGQAT+SHSLAER RREKI+ERMK LQDLVPGC+K ++
Sbjct: 108 QNPPPPKQDFIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNK------LMR 161
Query: 413 EIINYVQSL 421
+ Y QS+
Sbjct: 162 PWLGYWQSI 170
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RREKIS+RMK LQDLVP +K KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 378
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+ISER+K LQ+LVP C+K T +A MLDEI++YV+ L+ Q
Sbjct: 141 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDYVKFLRLQ 199
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 200 VKVLSM 205
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RREKIS+RMK LQDLVP +K KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 378
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RREKIS+RMK LQDLVP +K KA MLDEII+YV+ LQ Q
Sbjct: 317 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 375
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 376 VKVLSM 381
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQVQ 202
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 203 VKVLSM 208
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 11/97 (11%)
Query: 334 HKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKF 393
H ++TG +A Q P + VRARRGQAT+ HS+AER+RRE+I+ERMK
Sbjct: 136 HNQTNTGTVAAIPQ----------PPQVRPRVRARRGQATDPHSIAERLRRERIAERMKA 185
Query: 394 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
LQ+LVP C+K T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 186 LQELVPSCNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 221
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Query: 352 SQTSDPPKEEYIH--VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 409
S T P + IH VRARRGQAT+ HS+AER+RRE+ISER+K LQ+LVP C+K T +A
Sbjct: 119 STTVTIPHQPAIHPRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNK-TDRAA 177
Query: 410 MLDEIINYVQSLQRQVEFLSM 430
++DEI++YV+ L+ QV+ LSM
Sbjct: 178 LVDEILDYVKFLRLQVKVLSM 198
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RREKIS+RMK LQDLVP +K KA MLDEII+YV+ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 340
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 341 VKVLSM 346
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 187 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQ 245
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 246 VKVLSM 251
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RREKIS+RMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 373 VKVLSM 378
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQ 188
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 189 VKVLSM 194
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQ 188
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 189 VKVLSM 194
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RREKIS+RMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 373 VKVLSM 378
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII YV+ LQ Q
Sbjct: 296 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQLQ 354
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 355 VKVLSM 360
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 128 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQ 186
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 187 VKVLSM 192
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Query: 346 KQGKQGSQTSDP-PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
+Q KQG P P VRARRGQAT+ HS+AER+RRE+I+ERM+ LQ+LVP +K
Sbjct: 102 QQPKQGGAGVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK- 160
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSM 430
T +AVMLDEI++YV+ L+ QV+ LSM
Sbjct: 161 TDRAVMLDEILDYVKFLRLQVKVLSM 186
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RARRGQAT+ HS+AER+RREKISERMK LQDLVP +K K+ MLDEII+YV+ LQ QV
Sbjct: 321 RARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKA-DKSSMLDEIIDYVKFLQLQV 379
Query: 426 EFLSM 430
+ LSM
Sbjct: 380 KVLSM 384
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII YV+ LQ Q
Sbjct: 149 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQLQ 207
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 208 VKVLSM 213
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII YV+ LQ Q
Sbjct: 30 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIGYVKFLQLQ 88
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 89 VKVLSM 94
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 346 KQGKQGSQTSDP-PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
+Q KQG P P VRARRGQAT+ HS+AER+RRE+I+ERM+ LQ+LVP +K
Sbjct: 104 QQPKQGGAAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK- 162
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSM 430
T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 163 TDRAAMLDEILDYVKFLRLQVKVLSM 188
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RREKIS+RMK LQDLVP +K KA MLDEII++V+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDHVKFLQLQ 378
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRARRGQAT+ HS+AER+RREKIS+RMK LQ+LVP ++ T KA MLDEII YV+ LQ
Sbjct: 297 RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQL 355
Query: 424 QVEFLSM 430
QV+ LSM
Sbjct: 356 QVKVLSM 362
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 346 KQGKQGSQTSDP-PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
+Q KQG P P VRARRGQAT+ HS+AER+RRE+I+ERM+ LQ+LVP +K
Sbjct: 113 QQSKQGGAAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK- 171
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSM 430
T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 172 TDRAAMLDEILDYVKFLRLQVKVLSM 197
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRARRG AT+ HS+AER+RREKI+ERMK LQ+LVP +KV KA MLDEII YV+ LQ
Sbjct: 239 RVRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNKV-DKASMLDEIIEYVKFLQL 297
Query: 424 QVEFLSM 430
QV+ LSM
Sbjct: 298 QVKVLSM 304
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RARRGQAT+ HS+AER+RREKISERMK LQDLVP +K K+ MLDEII+YV+ LQ QV
Sbjct: 320 RARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKA-DKSSMLDEIIDYVKFLQLQV 378
Query: 426 EFLSM 430
+ L M
Sbjct: 379 KVLCM 383
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 346 KQGKQGSQTSDP-PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
+Q KQG P P VRARRGQAT+ HS+AER+RRE+I+ERM+ LQ+LVP +K
Sbjct: 113 QQSKQGGAAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK- 171
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSM 430
T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 172 TDRAAMLDEILDYVKFLRLQVKVLSM 197
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERM+ LQDLVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 181 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRLQ 239
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 240 VKVLSM 245
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RARRGQAT+ HS+AER+RREKISERMK LQ LVP +K KA MLDEII+YV+ LQ Q
Sbjct: 316 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKA-DKASMLDEIIDYVKFLQLQ 374
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 375 VKVLSM 380
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERM+ LQDLVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 132 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRLQ 190
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 191 VKVLSM 196
>gi|388509910|gb|AFK43021.1| unknown [Medicago truncatula]
Length = 102
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 59/88 (67%), Gaps = 11/88 (12%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
MK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN RL+ IE KD
Sbjct: 1 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEASPPKD 60
Query: 451 VLQ-----------SRAGPSSTLGFSPD 467
Q S+A + GFSP+
Sbjct: 61 YGQQTFDLAGMPFVSQATREPSRGFSPE 88
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RARRGQAT+ HS+AER+RREKISERMK LQ LVP +K KA MLDEII+YV+ LQ Q
Sbjct: 316 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKA-DKASMLDEIIDYVKFLQLQ 374
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 375 VKVLSM 380
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RARRGQAT+ HS+AER+RREKISERMK LQ LVP +K KA MLDEII+YV+ LQ Q
Sbjct: 316 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKA-DKASMLDEIIDYVKFLQLQ 374
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 375 VKVLSM 380
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 169 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDYVKFLRLQ 227
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 228 VKVLSM 233
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 151 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRLQ 209
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 210 VKVLSM 215
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RARRGQAT+ HS+AER+RREKISERMK LQ LVP +K KA MLDEII+YV+ LQ Q
Sbjct: 239 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKA-DKASMLDEIIDYVKFLQLQ 297
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 298 VKVLSM 303
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RARRGQAT+ HS+AER+RREKISERMK LQ+LVP +K K+ MLDEII+YV+ LQ QV
Sbjct: 322 RARRGQATDPHSIAERLRREKISERMKNLQELVPNSNK-ADKSSMLDEIIDYVKFLQLQV 380
Query: 426 EFLSM 430
+ LSM
Sbjct: 381 KVLSM 385
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA+RGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ QV
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 247
Query: 426 EFLSM 430
+ LSM
Sbjct: 248 KVLSM 252
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRARRGQAT+ HS+AER+RR +I+ER+K LQ+LVP C+K T +A MLDEI++YV+ L+
Sbjct: 19 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVDYVKFLRL 77
Query: 424 QVEFLSM 430
QV+ LSM
Sbjct: 78 QVKVLSM 84
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA+RGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ QV
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 254
Query: 426 EFLSM 430
+ LSM
Sbjct: 255 KVLSM 259
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDYVKFLRLQ 157
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 158 VKVLSM 163
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 169 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVDYVKFLRLQ 227
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 228 VKVLSM 233
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA+RGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ QV
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVRFLQLQV 253
Query: 426 EFLSM 430
+ LSM
Sbjct: 254 KVLSM 258
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 166 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVDYVKFLRLQ 224
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 225 VKVLSM 230
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 175 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRLQ 233
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 234 VKVLSM 239
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERM+ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 115 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 173
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 174 VKVLSM 179
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERM+ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 116 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 174
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 175 VKVLSM 180
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 346 KQGKQGSQTSDP-PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
+Q KQG P P VRARRGQAT+ HS+AER+RRE+I+ERM+ LQ+LVP +K
Sbjct: 113 QQSKQGGAAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK- 171
Query: 405 TGKAVMLDEIINYVQSLQRQVEFLSM 430
T +A MLDEI++YV+ L+ QV+ LS+
Sbjct: 172 TDRAAMLDEILDYVKFLRLQVKVLSI 197
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRARRGQAT+ HS+AER+RR +I+ER+K LQ+LVP C+K T +A MLDEI++YV+ L+
Sbjct: 15 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVDYVKFLRL 73
Query: 424 QVEFLSM 430
Q++ LSM
Sbjct: 74 QIKVLSM 80
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
S S PP VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T +A M+
Sbjct: 151 SAASQPPAIRP-RVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANK-TDRAAMI 208
Query: 412 DEIINYVQSLQRQVEFLSM 430
DEI++YV+ L+ QV+ LSM
Sbjct: 209 DEIVDYVKFLRLQVKVLSM 227
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 54/72 (75%), Gaps = 5/72 (6%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV-----TGKAVMLD 412
P + VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +KV T KA MLD
Sbjct: 278 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLD 337
Query: 413 EIINYVQSLQRQ 424
EII+YV+ LQ Q
Sbjct: 338 EIIDYVKFLQLQ 349
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERM+ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 24 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 82
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 83 VKVLSM 88
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 54/64 (84%), Gaps = 2/64 (3%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV--TGKAVMLDEIINYVQSLQ 422
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K+ T KA MLDEII+YV+ LQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 423 RQVE 426
QV+
Sbjct: 310 LQVK 313
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 159 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 217
Query: 425 VE 426
V+
Sbjct: 218 VK 219
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERM+ LQ+LVP +K + +A MLDEI++YV+ L+ Q
Sbjct: 180 VRARRGQATDPHSIAERLRRERIAERMRALQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 239 VKVLSM 244
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 55/66 (83%), Gaps = 3/66 (4%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 308
Query: 425 VEFLSM 430
V LSM
Sbjct: 309 V--LSM 312
>gi|226493556|ref|NP_001141213.1| uncharacterized protein LOC100273300 [Zea mays]
gi|194703300|gb|ACF85734.1| unknown [Zea mays]
gi|223946721|gb|ACN27444.1| unknown [Zea mays]
Length = 154
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 48/51 (94%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
M+ L++LVPGCSKV+G A++LDEIIN+VQSLQRQVE+LSM+LA VNPR+DF
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 51
>gi|51090923|dbj|BAD35528.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|51090957|dbj|BAD35560.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|215678579|dbj|BAG92234.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 154
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 48/51 (94%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
M+ L++LVPGCSKV+G A++LDEIIN+VQSLQRQVE+LSM+LA VNPR+DF
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 51
>gi|242096368|ref|XP_002438674.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
gi|241916897|gb|EER90041.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
Length = 154
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 48/51 (94%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 441
M+ L++LVPGCSKV+G A++LDEIIN+VQSLQRQVE+LSM+LA VNPR+DF
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 51
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RREKIS+RMK LQ+LVP +K T KA ML+EII Y++ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNK-TDKASMLEEIIEYIKFLQLQ 340
Query: 425 VEFLSM 430
+ LSM
Sbjct: 341 TKVLSM 346
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RARRGQAT+ HS+AER+RRE+I+ERM+ LQ+LVP +K T +A MLDEI++YV+ L+ QV
Sbjct: 127 RARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQV 185
Query: 426 EFLSM 430
+ LSM
Sbjct: 186 KVLSM 190
>gi|449440508|ref|XP_004138026.1| PREDICTED: uncharacterized protein LOC101208544 [Cucumis sativus]
gi|449501436|ref|XP_004161366.1| PREDICTED: uncharacterized LOC101208544 [Cucumis sativus]
Length = 135
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 48/55 (87%), Gaps = 1/55 (1%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL-DFNIE 444
MK LQ LVPGC KVTGKA+MLDEIINYVQSLQ QVEFLSMKLA+++P L DF ++
Sbjct: 1 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDFGMD 55
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 53/64 (82%), Gaps = 2/64 (3%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV--TGKAVMLDEIINYVQSLQ 422
VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 238 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQ 297
Query: 423 RQVE 426
QV+
Sbjct: 298 LQVK 301
>gi|414865639|tpg|DAA44196.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 201
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 43/45 (95%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
+E+Y+HVRA+RGQATNSHSLAER RREKI+ERMK LQDLVPGC+K
Sbjct: 148 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNK 192
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 4/73 (5%)
Query: 357 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 416
PP++ VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LV +K T KA MLDEII+
Sbjct: 140 PPRQR---VRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIID 195
Query: 417 YVQSLQRQVEFLS 429
YV+ LQ QV +S
Sbjct: 196 YVKFLQLQVLSMS 208
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRARRGQAT+ HS+AER+RREKIS+RMK LQ+LVP ++ T KA MLDEII YV+ LQ
Sbjct: 297 RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQL 355
Query: 424 QVEFLS 429
QV+ S
Sbjct: 356 QVKVRS 361
>gi|307136009|gb|ADN33865.1| bHLH transcription factor [Cucumis melo subsp. melo]
Length = 135
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL-DFNIE 444
MK LQ LVPGC KVTGKA MLDEIINYVQSLQ QVEFLSMKLA+++P L DF ++
Sbjct: 1 MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASLHPVLYDFGMD 55
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 4/73 (5%)
Query: 357 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 416
PP++ VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LV +K T KA MLDEII+
Sbjct: 112 PPRQR---VRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIID 167
Query: 417 YVQSLQRQVEFLS 429
YV+ LQ QV +S
Sbjct: 168 YVKFLQLQVLSMS 180
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
+ RA+RG AT+ S+AERVRR KISERMK LQDLVP K T + MLDE + YV+SLQ
Sbjct: 381 MRTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQ 440
Query: 423 RQVEFLS 429
RQV+ LS
Sbjct: 441 RQVQELS 447
>gi|255637743|gb|ACU19194.1| unknown [Glycine max]
Length = 156
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 60/89 (67%), Gaps = 7/89 (7%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR---LDFNIEELL 447
MK LQ LVPGC KVTGKA++LDEIINYVQSLQ QVEFLSMKLA VNP L +++ L+
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMFYDLAIDLDTLM 60
Query: 448 AK---DVLQSRAGPSSTLG-FSPDMPLVY 472
+ + + A PS L F P+ + +
Sbjct: 61 VRPDQKLNYNIASPSPCLAQFRPNQAIAF 89
>gi|356527670|ref|XP_003532431.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 156
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 60/89 (67%), Gaps = 7/89 (7%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR---LDFNIEELL 447
MK LQ LVPGC KVTGKA++LDEIINYVQSLQ QVEFLSMKLA VNP L +++ L+
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMFYDLAIDLDTLM 60
Query: 448 AK---DVLQSRAGPSSTLG-FSPDMPLVY 472
+ + + A PS L F P+ + +
Sbjct: 61 VRPDQKLNYNIASPSPCLAQFRPNQAIAF 89
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 370 GQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
GQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQLQVKVLS 227
Query: 430 M 430
M
Sbjct: 228 M 228
>gi|297728315|ref|NP_001176521.1| Os11g0442650 [Oryza sativa Japonica Group]
gi|255680061|dbj|BAH95249.1| Os11g0442650 [Oryza sativa Japonica Group]
Length = 461
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 78/169 (46%), Gaps = 46/169 (27%)
Query: 276 GQDEPSAVEGTGGEPSAKGLSSKKRKRNGQDIEFDQ-------AKGGQSSGEAAKDNTEN 328
G+D + + SA L S++R + F Q AK + S +AA D
Sbjct: 189 GKDAATTIAKVLRLLSAPPLQSRRRTSPETMVNFPQSPEPGTKAKKCKLSADAAGDEDTK 248
Query: 329 QRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAER------- 381
GD G+ GK GK +PPK+ YIHVRARRGQAT+SHSLAER
Sbjct: 249 PVAGD-----AGHGGNGK-GKVLDAAGEPPKD-YIHVRARRGQATDSHSLAERVKAAGID 301
Query: 382 -------------------------VRREKISERMKFLQDLVPGCSKVT 405
VRREKISERMK LQDLVPGC+KV
Sbjct: 302 AANHNFFFSSILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKVA 350
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA RGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ QV
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 298
Query: 426 EFLS 429
+S
Sbjct: 299 LSMS 302
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 370 GQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
GQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 430 M 430
M
Sbjct: 323 M 323
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 370 GQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
GQAT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 430 M 430
M
Sbjct: 323 M 323
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 53/73 (72%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
+ RA+RG AT+ S+AERVRR KISERMK LQDLVP K T + MLDE + YV+SLQ
Sbjct: 30 MRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQ 89
Query: 423 RQVEFLSMKLATV 435
R+V+ LS +A +
Sbjct: 90 RKVQELSDTVARL 102
>gi|195643094|gb|ACG41015.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 151
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 44/49 (89%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
M+ LQ LVPGC KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVL 49
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQDLVP K T + MLD ++Y++ LQRQ
Sbjct: 339 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 398
Query: 425 VEFLS 429
VE LS
Sbjct: 399 VETLS 403
>gi|115477539|ref|NP_001062365.1| Os08g0536800 [Oryza sativa Japonica Group]
gi|38175541|dbj|BAD01234.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|45736094|dbj|BAD13119.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|113624334|dbj|BAF24279.1| Os08g0536800 [Oryza sativa Japonica Group]
Length = 143
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 44/49 (89%)
Query: 391 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 439
M+ LQ LVPGC KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVL 49
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISERM+ LQDLVP K T A MLD ++Y++ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 392
Query: 425 VEFLS 429
V+ LS
Sbjct: 393 VQTLS 397
>gi|79324891|ref|NP_001031530.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|330255009|gb|AEC10103.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 233
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 40/46 (86%)
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
K Y+HVRARRGQAT++HSLAER RREKI+ RMK LQ+LVPGC KV
Sbjct: 179 KLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKV 224
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISERM+ LQDLVP K T A MLD + Y++ LQ Q
Sbjct: 337 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 396
Query: 425 VEFLS 429
VE LS
Sbjct: 397 VEALS 401
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 54/82 (65%)
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
+DP +RA RG AT+ S+AERVRR KISERMK LQDLVP + T A MLD+
Sbjct: 53 ADPSAVPLKTIRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDA 112
Query: 415 INYVQSLQRQVEFLSMKLATVN 436
+ YV+ LQ+QV+ LS +A +
Sbjct: 113 VEYVKQLQQQVQELSKTVAELQ 134
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISERM+ LQDLVP K T A MLD ++Y++ LQ+Q
Sbjct: 330 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 389
Query: 425 VEFLS 429
V+ LS
Sbjct: 390 VQTLS 394
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISERM+ LQDLVP K T A MLD + Y++ LQ Q
Sbjct: 340 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 399
Query: 425 VEFLS 429
V+ LS
Sbjct: 400 VQTLS 404
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISERM+ LQDLVP K T + MLD + Y++ LQ Q
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 414
Query: 425 VEFLS 429
VE LS
Sbjct: 415 VETLS 419
>gi|255563356|ref|XP_002522681.1| hypothetical protein RCOM_0886600 [Ricinus communis]
gi|223538157|gb|EEF39768.1| hypothetical protein RCOM_0886600 [Ricinus communis]
Length = 77
Score = 78.6 bits (192), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/59 (67%), Positives = 43/59 (72%)
Query: 410 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDM 468
MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFNI L+AK+ +G S DM
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNINNLIAKETFPPCPTNFPAIGMSSDM 59
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 59/85 (69%), Gaps = 10/85 (11%)
Query: 355 SDPPKEEYIHVR---------ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 405
SD +EEY+ V+ ++R +A H+L+ER RR++I+E+M+ LQ+L+P C+KV
Sbjct: 430 SDDVEEEYMGVKKGDHARGMGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV- 488
Query: 406 GKAVMLDEIINYVQSLQRQVEFLSM 430
KA MLDE I Y+++LQ QV+ +SM
Sbjct: 489 DKASMLDEAIEYLKTLQLQVQMMSM 513
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQDLVP K T + MLD ++Y++ LQRQ
Sbjct: 344 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 403
Query: 425 VEFLS 429
+ LS
Sbjct: 404 FKALS 408
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
Query: 372 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
AT+ HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 220 ATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 277
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 77.0 bits (188), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/71 (56%), Positives = 49/71 (69%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
+ RA+RG AT+ S+AERVRR +ISERMK LQDLVP K T A MLDE + YV+SLQ
Sbjct: 3 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSLQ 62
Query: 423 RQVEFLSMKLA 433
+V L +A
Sbjct: 63 VKVSELQETIA 73
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 8/77 (10%)
Query: 360 EEYIH--------VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
E+++H +RA+RG AT+ S+AERVRR KISERM+ LQDLVP K T A ML
Sbjct: 319 EKFLHFSDSVPMKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADML 378
Query: 412 DEIINYVQSLQRQVEFL 428
D ++Y++ LQ+Q + L
Sbjct: 379 DLAVDYIKDLQKQAQKL 395
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++RG+A H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 375
Query: 427 FLSMKLATVNPRL 439
+SM P +
Sbjct: 376 IMSMGAGIYMPSM 388
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++RG+A H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 375
Query: 427 FLSMKLATVNPRL 439
+SM P +
Sbjct: 376 IMSMGAGMYMPSM 388
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++RG+A H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 375
Query: 427 FLSMKLATVNPRL 439
+SM P +
Sbjct: 376 IMSMGAGMYMPSM 388
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++RG+A H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 375
Query: 427 FLSMKLATVNPRL 439
+SM P +
Sbjct: 376 IMSMGAGMYMPSM 388
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++RG+A H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 375
Query: 427 FLSMKLATVNPRL 439
+SM P +
Sbjct: 376 IMSMGAGMYMPSM 388
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD + Y++ LQ+Q
Sbjct: 294 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQ 353
Query: 425 VEFLSMKLATVN----PRLDFN 442
+ LS K A P+ D N
Sbjct: 354 FKTLSEKRANCKCISMPKADTN 375
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%)
Query: 355 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 414
+DP +RA RG AT+ S+AERVRR KISERMK LQ+LVP + T A MLD+
Sbjct: 369 ADPSMVYLKTLRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDA 428
Query: 415 INYVQSLQRQVEFLSMKLATV 435
+ YV+ LQ QV+ L+ +A +
Sbjct: 429 VEYVKQLQLQVQELTNTVAEL 449
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQDLVP K T A MLD ++Y++ LQ+Q
Sbjct: 282 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQ 341
Query: 425 VEFLS 429
+ LS
Sbjct: 342 FKTLS 346
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 7/85 (8%)
Query: 352 SQTSDPPKEEYIH------VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 405
S +S+ EE++ VRA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T
Sbjct: 449 STSSELAMEEFLQDAVPCKVRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQT 508
Query: 406 -GKAVMLDEIINYVQSLQRQVEFLS 429
A MLDE + YV+SLQ+QV+ L+
Sbjct: 509 VNIADMLDEAVEYVKSLQKQVQELA 533
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD + Y++ LQ+Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 359
Query: 425 VEFLSMKLA 433
+ LS K A
Sbjct: 360 FKTLSEKRA 368
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 49/65 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T + MLD ++Y++ LQ+Q
Sbjct: 219 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 278
Query: 425 VEFLS 429
V+ LS
Sbjct: 279 VKTLS 283
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 300 RKRNGQD-----------IEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQG 348
RKR G++ I A G Q A + T+N D G + A
Sbjct: 286 RKRKGREEEAECHSEFIAISITMAHGNQPQSVAIRQKTQN--SADSSKPLQGRRDAANPL 343
Query: 349 KQGS-QTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGK 407
K +++D K + ++R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + K
Sbjct: 344 KDAEFESADAKKRIRGSMSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDK 402
Query: 408 AVMLDEIINYVQSLQRQVEFLSMKLATV 435
A MLDE I Y++SLQ QV+ +SM + V
Sbjct: 403 ASMLDEAIEYLKSLQLQVQMMSMGCSMV 430
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 325 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQ 384
Query: 425 VEFL 428
V+ L
Sbjct: 385 VKVL 388
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T + MLD ++Y++ LQRQ
Sbjct: 285 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 344
Query: 425 VEFL 428
+ L
Sbjct: 345 YKIL 348
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
+RA+RG AT+ S+AERVRR KISER++ LQ+LVP K T A MLD ++Y++ LQ
Sbjct: 158 CKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQ 217
Query: 423 RQVEFL 428
+QV+ L
Sbjct: 218 KQVKVL 223
>gi|223942973|gb|ACN25570.1| unknown [Zea mays]
gi|413951549|gb|AFW84198.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 156
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 410 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN--IEELLAKDVLQSRAGPSSTLGFS-P 466
MLDEIINYVQSLQRQVEFLSMKLATVNP+LDFN LL KD+ Q P L S
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKDIHQPCGPPHFPLETSGA 60
Query: 467 DMPLVYPPVHQSQAGLMHGALPGMGNPSD-ILRRTINSQLTPMTGGFKEPSQVSFYPQ 523
+P + P H S G G +P D R +N Q + G SQV + Q
Sbjct: 61 PLPYLSQPHHGSPLGCCMDTQGGSMHPLDAAFCRPMNPQHPFLNGASDAASQVGTFWQ 118
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 67/109 (61%), Gaps = 14/109 (12%)
Query: 335 KPSSTGNKSAGKQGKQGSQTSDPPKEEYIH-------------VRARRGQATNSHSLAER 381
+P+ST N+S+ ++ ++ S+ P E+ ARR +A H+L+ER
Sbjct: 266 EPTSTSNRSSKRKRGLDTEDSESPSEDAESESLALDRKPPQKLTTARRSRAAEVHNLSER 325
Query: 382 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
RR++I+E+M+ LQ+L+P C+K T KA MLDE I Y+++LQ QV+ + M
Sbjct: 326 RRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQMMWM 373
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 75.5 bits (184), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA+RG AT+ S+AERVRR +ISERM+ LQDLVP K T + MLD ++Y++ LQRQV
Sbjct: 33 RAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQV 92
Query: 426 EFLS 429
+ LS
Sbjct: 93 QTLS 96
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 77/124 (62%), Gaps = 9/124 (7%)
Query: 309 FDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIH--VR 366
F + +GG SG+ D+ + R KP G Q Q S P + I VR
Sbjct: 94 FLRPEGGHGSGKRFSDDVVDNRCSSMKPVYHG------QPMQQPAPSAPHQPTSIRPRVR 147
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+ L+ QV+
Sbjct: 148 ARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQVK 206
Query: 427 FLSM 430
LSM
Sbjct: 207 VLSM 210
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 75.5 bits (184), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/73 (53%), Positives = 52/73 (71%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
+ RA+RG AT+ S+AERVRR +ISERMK LQDLVP K T + MLDE + YV+SLQ
Sbjct: 1 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQ 60
Query: 423 RQVEFLSMKLATV 435
+V+ L+ +A +
Sbjct: 61 MKVKELTETIAQL 73
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISERM+ LQ+LVP K T + MLD + Y++ LQ+Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 425 VEFLS 429
V+ LS
Sbjct: 419 VQTLS 423
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISERM+ LQ+LVP K T + MLD + Y++ LQ+Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 425 VEFLS 429
V+ LS
Sbjct: 419 VQTLS 423
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 72/116 (62%), Gaps = 11/116 (9%)
Query: 316 QSSGEAAKDNTENQRKGDHKPSSTG-NKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATN 374
+S E K N +++++ + + ++T +S ++ KQ ++ +R +A
Sbjct: 237 KSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVST---------TSTKRSRAAE 287
Query: 375 SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
H+L+ER RR++I+ERMK LQ+L+P C+K + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 288 VHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 342
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 64/106 (60%), Gaps = 16/106 (15%)
Query: 325 NTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRR 384
+T++ + S+ K+AG QG GS +R +A H+L+ER RR
Sbjct: 340 DTDDSECHSEEESAGAKKTAGGQGGAGS---------------KRSRAAEVHNLSERRRR 384
Query: 385 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+ +SM
Sbjct: 385 DRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSM 429
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 72/116 (62%), Gaps = 11/116 (9%)
Query: 316 QSSGEAAKDNTENQRKGDHKPSSTG-NKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATN 374
+S E K N +++++ + + ++T +S ++ KQ ++ +R +A
Sbjct: 237 KSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVST---------TSTKRSRAAE 287
Query: 375 SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
H+L+ER RR++I+ERMK LQ+L+P C+K + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 288 VHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 342
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 8/78 (10%)
Query: 360 EEYIH--------VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
E+++H +RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A ML
Sbjct: 258 EKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADML 317
Query: 412 DEIINYVQSLQRQVEFLS 429
D ++Y++ LQ+Q + LS
Sbjct: 318 DLAVDYIKDLQKQYKTLS 335
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 353 QTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 412
+++DP K+ +R +A H+L+ER RR++I+E+MK LQ+L+P C+K T KA MLD
Sbjct: 298 ESADPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-TDKASMLD 356
Query: 413 EIINYVQSLQRQVEFLSM 430
E I Y+++LQ QV+ +SM
Sbjct: 357 EAIEYLKTLQLQVQMMSM 374
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A MLDE + YV+ LQ
Sbjct: 168 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQ 227
Query: 423 RQVEFLS 429
RQ++ L+
Sbjct: 228 RQIQELT 234
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A+R +A H+L+ER RR++I+E+MK LQ+L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 362
Query: 427 FLSMKLATV 435
+SM + V
Sbjct: 363 MMSMGCSMV 371
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ SLAERVRR +ISERM+ LQ++VP K T + MLD + Y++ LQ+Q
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQ 302
Query: 425 VEFLSMKLATVNPR 438
++ +S K A R
Sbjct: 303 LKTMSAKRAKCRCR 316
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 70/115 (60%), Gaps = 16/115 (13%)
Query: 335 KPSSTGNKSAGKQGKQGSQTSDPPKEEY--------------IHVRARRGQATNSHSLAE 380
+P+ST N+S+ K+ + ++ S+ P E+ ARR +A H+L+E
Sbjct: 284 EPASTSNRSS-KRKRLDTEDSESPSEDAESGSAAMLARKPPQKMTTARRSRAAEVHNLSE 342
Query: 381 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 435
R RR++I+E+M+ LQ+L+P C+K T KA MLDE I Y++SLQ QV+ + M A +
Sbjct: 343 RRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQMMWMGSAGI 396
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T + MLD ++Y++ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 425 VEFL 428
+ L
Sbjct: 339 YKIL 342
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A+R +A H+L+ER RR++I+E+MK LQ+L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 324
Query: 427 FLSMKLATV 435
+SM + V
Sbjct: 325 MMSMGCSMV 333
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 319 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 378
Query: 425 VEFL 428
V+ L
Sbjct: 379 VKVL 382
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 77/124 (62%), Gaps = 9/124 (7%)
Query: 309 FDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIH--VR 366
F + +GG SG+ D+ + R KP G Q Q S P + I VR
Sbjct: 94 FLRPEGGHGSGKRFSDDVVDNRCSSMKPVFHG------QPMQQPPPSAPHQPTSIRPRVR 147
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+ L+ QV+
Sbjct: 148 ARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQVK 206
Query: 427 FLSM 430
LSM
Sbjct: 207 VLSM 210
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARR +A H+L+ER RR++I+E+MK LQ+L+P C+K T KA MLDE I Y+++LQ QV+
Sbjct: 262 ARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 320
Query: 427 FLSMKLATVNPRLDF 441
+ M P + F
Sbjct: 321 MMWMGSGMAPPAVMF 335
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 70/115 (60%), Gaps = 16/115 (13%)
Query: 335 KPSSTGNKSAGKQGKQGSQTSDPPKEEY--------------IHVRARRGQATNSHSLAE 380
+P+ST N+S+ K+ + ++ S+ P E+ ARR +A H+L+E
Sbjct: 284 EPASTSNRSS-KRKRLDTEDSESPSEDAESGSAAMLARKPPQKMTTARRSRAAEVHNLSE 342
Query: 381 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 435
R RR++I+E+M+ LQ+L+P C+K T KA MLDE I Y++SLQ QV+ + M A +
Sbjct: 343 RRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQMMWMGSAGI 396
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T + MLD ++Y++ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 425 VEFL 428
+ L
Sbjct: 339 YKIL 342
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 77/124 (62%), Gaps = 9/124 (7%)
Query: 309 FDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIH--VR 366
F + +GG SG+ D+ + R KP G Q Q S P + I VR
Sbjct: 94 FLRPEGGHGSGKRFSDDVVDNRCSSMKPVFHG------QPMQQPAPSAPHQPTSIRPRVR 147
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+ L+ QV+
Sbjct: 148 ARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQVK 206
Query: 427 FLSM 430
LSM
Sbjct: 207 VLSM 210
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 377
Query: 425 VEFL 428
V+ L
Sbjct: 378 VKVL 381
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 77/124 (62%), Gaps = 9/124 (7%)
Query: 309 FDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIH--VR 366
F + +GG SG+ D+ + R KP G Q Q S P + I VR
Sbjct: 94 FLRPEGGHGSGKRFSDDVVDNRCSSMKPVFHG------QPMQQPPPSAPHQPTSIRPRVR 147
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+ L+ QV+
Sbjct: 148 ARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQVK 206
Query: 427 FLSM 430
LSM
Sbjct: 207 VLSM 210
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 77/124 (62%), Gaps = 9/124 (7%)
Query: 309 FDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIH--VR 366
F + +GG SG+ D+ + R KP G Q Q S P + I VR
Sbjct: 94 FLRPEGGHGSGKRFSDDVVDNRCSSMKPVFHG------QPMQQPPPSAPHQPTSIRPRVR 147
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+ L+ QV+
Sbjct: 148 ARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQVK 206
Query: 427 FLSM 430
LSM
Sbjct: 207 VLSM 210
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 72/116 (62%), Gaps = 11/116 (9%)
Query: 316 QSSGEAAKDNTENQRKGDHKPSSTG-NKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATN 374
+S E K N +++++ + + ++T +S ++ KQ ++ +R +A
Sbjct: 166 KSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVST---------TSTKRSRAAE 216
Query: 375 SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
H+L+ER RR++I+ERMK LQ+L+P C+K + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 217 VHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 271
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A ML+E ++YV+ LQRQ
Sbjct: 188 IRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQ 247
Query: 425 VEFLS 429
++ L+
Sbjct: 248 IQELT 252
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RARRG AT+ S+AER RR +ISERMK LQDLVP K T A MLDE + YV+ LQ QV
Sbjct: 16 RARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQV 75
Query: 426 EFLS 429
+ LS
Sbjct: 76 KDLS 79
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 72/116 (62%), Gaps = 11/116 (9%)
Query: 316 QSSGEAAKDNTENQRKGDHKPSSTG-NKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATN 374
+S E K N +++++ + + ++T +S ++ KQ ++ +R +A
Sbjct: 166 KSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVST---------TSTKRSRAAE 216
Query: 375 SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
H+L+ER RR++I+ERMK LQ+L+P C+K + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 217 VHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 271
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T + MLD ++Y++ LQRQ
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 359
Query: 425 VEFL 428
+ L
Sbjct: 360 YKIL 363
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ+Q
Sbjct: 285 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 344
Query: 425 VEFL 428
V+ L
Sbjct: 345 VKVL 348
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ+Q
Sbjct: 292 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 351
Query: 425 VEFL 428
V+ L
Sbjct: 352 VKVL 355
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 16/107 (14%)
Query: 324 DNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVR 383
D++E + + S+ K+AG +G GS +R +A H+L+ER R
Sbjct: 403 DDSECHSEDVEEESAGAKKTAGGRGGAGS---------------KRSRAAEVHNLSERKR 447
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
R++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+ +SM
Sbjct: 448 RDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSM 493
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 297 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 356
Query: 425 VEFL 428
V+ L
Sbjct: 357 VKVL 360
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISERM+ LQDLVP T A MLD + Y++ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 425 VEFL 428
V+ L
Sbjct: 364 VKAL 367
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A ML+E + YV+ LQ
Sbjct: 184 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 243
Query: 423 RQVEFLS--MKLATVNPR 438
RQ++ L+ K T P+
Sbjct: 244 RQIQELTEEQKRCTCIPK 261
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A ML+E + YV+ LQ
Sbjct: 182 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 241
Query: 423 RQVEFLS--MKLATVNPR 438
RQ++ L+ K T P+
Sbjct: 242 RQIQELTEEQKRCTCIPK 259
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 516
Query: 427 FLSMKLATVNPRLDF 441
+SM P + F
Sbjct: 517 IMSMGAGLFMPPMMF 531
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISERM+ LQDLVP T A MLD + Y++ LQ Q
Sbjct: 303 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 362
Query: 425 VEFL 428
V+ L
Sbjct: 363 VKTL 366
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQDL P K T A MLD + Y++ LQ+Q
Sbjct: 350 IRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQ 409
Query: 425 VEFL 428
V+ L
Sbjct: 410 VKTL 413
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 522
Query: 427 FLSMKLATVNPRL 439
+SM P++
Sbjct: 523 MMSMGAGLYMPQM 535
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA MLDE I Y++SLQ QV+
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 382
Query: 427 FLSMKLATVNPRLDF--NIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPP 474
+ M P + + L++ + GP++ + P +P + P
Sbjct: 383 MMWMGSGIAAPPAVMFPGVHQYLSR--MGVGMGPAAAMPSMPRLPFMAAP 430
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 77/124 (62%), Gaps = 9/124 (7%)
Query: 309 FDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIH--VR 366
F + +GG SG+ D+ + R KP G Q Q S P + I VR
Sbjct: 31 FLRPEGGHGSGKRFSDDVVDNRCSSMKPVFHG------QPMQQPPPSAPHQPTSIRPRVR 84
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+ L+ QV+
Sbjct: 85 ARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQVK 143
Query: 427 FLSM 430
LSM
Sbjct: 144 VLSM 147
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 425 VEFLSMKLATVN 436
V+ L+ A+
Sbjct: 357 VKALNESRASCT 368
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 303 IRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQ 362
Query: 425 VEFLSMKLA 433
+ LS K A
Sbjct: 363 FKTLSDKRA 371
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 425 VEFLSMKLATVN 436
V+ L+ A+
Sbjct: 357 VKALNESRASCT 368
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A MLDE + YV+ LQ+Q
Sbjct: 81 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQ 140
Query: 425 VEFLS 429
+E LS
Sbjct: 141 IEELS 145
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A MLDE + YV+ LQ Q
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQ 177
Query: 425 VEFLS 429
+E LS
Sbjct: 178 IEELS 182
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+
Sbjct: 461 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 519
Query: 427 FLSMKLATVNPRL 439
+SM P +
Sbjct: 520 IMSMGAGLYMPSM 532
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 50/63 (79%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R +++ H+L+ER RR++I+E+M+ LQ+LVP C+K KA ML+E+I Y++SLQ QV+
Sbjct: 217 KRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQA 276
Query: 428 LSM 430
+SM
Sbjct: 277 MSM 279
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 79/144 (54%), Gaps = 11/144 (7%)
Query: 287 GGEPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGK 346
GG P GLS + K E G + GE D + SS N G+
Sbjct: 86 GGPPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVV----------DVRASSVKNVFQGQ 135
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
Q + P VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T
Sbjct: 136 QMHAAMGAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TD 194
Query: 407 KAVMLDEIINYVQSLQRQVEFLSM 430
+A MLDEI++YV+ L+ QV+ LSM
Sbjct: 195 RAAMLDEIVDYVKFLRLQVKVLSM 218
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T + MLD ++Y++ LQ+Q
Sbjct: 362 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 421
Query: 425 VEFLSMKLATVNPRLD 440
V+ K A LD
Sbjct: 422 VKRNRKKAAIKCKILD 437
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 9/136 (6%)
Query: 299 KRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDH-----KPSSTGNKSAGKQGKQGSQ 353
K+ R +++ KG +SSG + K ++ +RK + + S N + +
Sbjct: 169 KKIRTSNNVQIKSRKGTESSGNSKKVSSTRRRKCEEEQENGRSSCDMNSCSSDNSSEDDN 228
Query: 354 TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
+ PK + RA RG AT+ SL R RRE+I+ER++ LQ LVP +KV + ML+E
Sbjct: 229 NNASPKPK---TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEE 284
Query: 414 IINYVQSLQRQVEFLS 429
++YV+ LQ Q++ LS
Sbjct: 285 AVHYVKFLQLQIKLLS 300
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISER+K LQDL P K T A MLD + Y++ LQ++
Sbjct: 366 IRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQK 425
Query: 425 VEFLS 429
V+ LS
Sbjct: 426 VKILS 430
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+
Sbjct: 322 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 380
Query: 427 FLSMKLATVNPRL 439
+SM P +
Sbjct: 381 IMSMGTGLCMPPM 393
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+
Sbjct: 453 SKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 511
Query: 427 FLSM 430
+SM
Sbjct: 512 IMSM 515
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 8/77 (10%)
Query: 360 EEYIH--------VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
E+++H +RA+RG AT+ S+AERVRR +ISERM+ LQ+L P K T A ML
Sbjct: 320 EKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADML 379
Query: 412 DEIINYVQSLQRQVEFL 428
D + Y++ LQ+QV+ L
Sbjct: 380 DLAVEYIKDLQKQVKTL 396
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ+Q
Sbjct: 317 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 376
Query: 425 VEFL 428
V+ L
Sbjct: 377 VKAL 380
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 9/136 (6%)
Query: 299 KRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDH-----KPSSTGNKSAGKQGKQGSQ 353
K+ R +++ KG +SSG + K ++ +RK + + S N + +
Sbjct: 169 KKIRTSNNVQIKSRKGTESSGNSKKVSSTRRRKCEEEQENGRSSCDMNSCSSDNSSEDDN 228
Query: 354 TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
+ PK + RA RG AT+ SL R RRE+I+ER++ LQ LVP +KV + ML+E
Sbjct: 229 NNASPKPK---TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEE 284
Query: 414 IINYVQSLQRQVEFLS 429
++YV+ LQ Q++ LS
Sbjct: 285 AVHYVKFLQLQIKLLS 300
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 8/78 (10%)
Query: 360 EEYIH--------VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
E+++H +RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A ML
Sbjct: 258 EKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADML 317
Query: 412 DEIINYVQSLQRQVEFLS 429
D + Y++ LQ+Q + LS
Sbjct: 318 DLAVVYIKDLQKQYKTLS 335
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 516
Query: 427 FLSM 430
+SM
Sbjct: 517 IMSM 520
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ+Q
Sbjct: 194 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 253
Query: 425 VEFLSMKLATVN 436
V+ L+ A+
Sbjct: 254 VKALNESRASCT 265
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+
Sbjct: 443 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 501
Query: 427 FLSM 430
+SM
Sbjct: 502 IMSM 505
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA MLDE I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 427 FLSMKLATVNPRLDFNIEELLAK 449
+ M P + + + L +
Sbjct: 373 MMWMGSGMAPPVMFPGVHQYLPR 395
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA MLDE I Y+++LQ QV+
Sbjct: 32 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 90
Query: 427 FLSM 430
+ M
Sbjct: 91 MMWM 94
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 84/138 (60%), Gaps = 11/138 (7%)
Query: 294 GLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGN-KSAGKQGKQGS 352
GLS + K +G F + +G SG+ +D+ + R KP G S
Sbjct: 87 GLSLDQGKGHG----FLKPEGVHGSGKRFQDDVVDNRCSSMKPVFHGQPMSQPAPPMPHQ 142
Query: 353 QTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 412
Q+S P+ VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP SK T +A M+D
Sbjct: 143 QSSIRPR-----VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSK-TDRAAMID 196
Query: 413 EIINYVQSLQRQVEFLSM 430
EI++YV+ L+ QV+ LSM
Sbjct: 197 EIVDYVKFLRLQVKVLSM 214
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 322 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 381
Query: 425 VEFL 428
V+ L
Sbjct: 382 VKGL 385
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+R +A H+L+ER RR++I+ERMK LQ+L+P C+K + KA MLDE I Y++SLQ Q++
Sbjct: 289 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQ 347
Query: 427 FLSM 430
+SM
Sbjct: 348 VMSM 351
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R +A H+L+ER RR++I+E+MK LQ+L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 260 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 318
Query: 428 LSMKLATV 435
+SM V
Sbjct: 319 MSMGYGMV 326
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD + Y++ LQ+Q
Sbjct: 321 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 380
Query: 425 VEFLS 429
L+
Sbjct: 381 YNTLT 385
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA MLDE I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 427 FLSMKLATVNPRLDFNIEELLAK 449
+ M P + + + L +
Sbjct: 373 MMWMGSGMAPPVMFPGVHQYLPR 395
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 359
Query: 425 VEFL 428
V+ +
Sbjct: 360 VKVI 363
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ Q
Sbjct: 327 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 386
Query: 425 VEFL 428
V+ +
Sbjct: 387 VKVM 390
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD + Y++ LQ+Q
Sbjct: 310 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 369
Query: 425 VEFLS 429
L+
Sbjct: 370 YNTLT 374
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R ++ H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++SLQ QV+
Sbjct: 337 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 395
Query: 427 FLSMKLATVNPRLDF 441
+SM P + F
Sbjct: 396 IMSMASGYYMPPVMF 410
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A ML+E + YV+ LQ+
Sbjct: 182 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQK 241
Query: 424 QVEFLS 429
Q++ L+
Sbjct: 242 QIQELT 247
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R +A H+L+ER RR++I+E+MK LQ+L+P C+K + KA MLDE I+Y++SLQ QV+
Sbjct: 305 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAISYLKSLQLQVQM 363
Query: 428 LSMKLATV 435
+SM V
Sbjct: 364 MSMGCGMV 371
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA MLDE I Y++SLQ Q++
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 353
Query: 427 FLSMKLATVNPRLDFNIEELLAK 449
+ M P + + + L +
Sbjct: 354 MMWMGSGMAPPVMFPGVHQYLPR 376
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ Q
Sbjct: 307 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 366
Query: 425 VEFLSMKLATVN 436
V+ ++ A+
Sbjct: 367 VKVINESRASCT 378
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A+R + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y+++LQ QV+
Sbjct: 380 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQ 438
Query: 427 FLSM 430
+SM
Sbjct: 439 MMSM 442
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 8/77 (10%)
Query: 360 EEYIH--------VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
E+++H +RA+RG AT+ S+AERVRR +ISERM+ LQ+L P K T A ML
Sbjct: 158 EKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADML 217
Query: 412 DEIINYVQSLQRQVEFL 428
D + Y++ LQ+QV+ L
Sbjct: 218 DLAVEYIKDLQKQVKTL 234
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A ML+E + YV+ LQ+
Sbjct: 83 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQK 142
Query: 424 QVEFL 428
Q+E L
Sbjct: 143 QIEEL 147
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R ++ H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 397
Query: 427 FLSM 430
+SM
Sbjct: 398 IMSM 401
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 377
Query: 425 VEFL 428
V+ L
Sbjct: 378 VKGL 381
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 72.8 bits (177), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 30 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 89
Query: 425 VEFLS 429
+ LS
Sbjct: 90 YKTLS 94
>gi|414876673|tpg|DAA53804.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 310
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 356 DPPKEEYI-----HVRARRGQATNSHSLAERVRREKISERMKFL--QDLVPGCSKVTGKA 408
+PP E Y+ V + H R+ I ++M + ++ + +V G A
Sbjct: 131 NPPSEPYVLEVNRDVSFYNFRTKQVHEFTARLL--DIHDKMMLINNKETLDFSFQVVGNA 188
Query: 409 VMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN-IEELLAKD 450
VML EIINYVQSLQRQVEF+SMKLATVNP++D N + +L KD
Sbjct: 189 VMLGEIINYVQSLQRQVEFMSMKLATVNPQVDLNSLPNVLPKD 231
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+R A H+L+ER RR++I+E+MK LQ+L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 272 TKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 330
Query: 427 FLSM 430
+SM
Sbjct: 331 MMSM 334
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ+Q
Sbjct: 288 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 347
Query: 425 VE 426
V+
Sbjct: 348 VK 349
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ Q
Sbjct: 324 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 383
Query: 425 VEFL 428
V+ +
Sbjct: 384 VKVM 387
>gi|4678267|emb|CAB41175.1| putative protein [Arabidopsis thaliana]
Length = 137
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKD 450
+ G A++LDEIIN+VQSLQRQVE LSM+LA VNPR+DFN++ +LA +
Sbjct: 1 IQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 47
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A+R + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y+++LQ QV+
Sbjct: 177 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQ 235
Query: 427 FLSM 430
+SM
Sbjct: 236 MMSM 239
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARR +A H+ +ER RR++I+E+MK LQ LVP SK T KA MLDE+I Y++ LQ QV+
Sbjct: 257 ARRSRAAAIHNQSERRRRDRINEKMKALQKLVPNASK-TDKASMLDEVIEYLKQLQAQVQ 315
Query: 427 FLSMK 431
F+S++
Sbjct: 316 FMSVR 320
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP K T A MLD + Y++ LQ+Q
Sbjct: 196 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 255
Query: 425 VEFLS 429
L+
Sbjct: 256 YNTLT 260
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 14/116 (12%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+E+M+ LQ+L+P C K T KA MLDE I Y++SLQ Q++
Sbjct: 183 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCYK-TDKASMLDEAIEYLKSLQLQLQV 241
Query: 428 LSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLM 483
+ M + P L ++ +++ +G P +P + P+H + L+
Sbjct: 242 MWMG-GGMAPMLFPGVQHFMSR------------MGMGPPLPSMQNPMHLPRVQLI 284
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ QV+
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 415
Query: 428 LSMKLATV 435
+SM + V
Sbjct: 416 MSMGCSMV 423
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R + H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 397
Query: 427 FLSM 430
+SM
Sbjct: 398 IMSM 401
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A ML+E + YV++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 425 VEFLS 429
++ L+
Sbjct: 241 IQELT 245
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +AVMLDEI++YV+ L+ Q
Sbjct: 123 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAVMLDEIVDYVKFLRLQ 181
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 182 VKVLSM 187
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 425 VEFL 428
V+ L
Sbjct: 129 VKGL 132
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 49/67 (73%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
VRA+RG AT+ S+AERVRR +IS+R++ LQ++VP K T A ML+E + YV+ LQ
Sbjct: 166 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQ 225
Query: 423 RQVEFLS 429
+Q++ L+
Sbjct: 226 KQIQELT 232
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA +LDE I Y++SLQ QV+
Sbjct: 227 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQMQVQI 285
Query: 428 LSM 430
+ M
Sbjct: 286 MWM 288
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA +LDE I Y++SLQ QV+
Sbjct: 228 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 286
Query: 428 LSM 430
+ M
Sbjct: 287 MWM 289
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y+++LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQM 367
Query: 428 LSM 430
+SM
Sbjct: 368 MSM 370
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A+R +A H+L+ER RR++I+E+MK LQ+L+P C+K T KA MLDE I Y++SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 427 FLSMKLATVNPRLDF 441
+ M P + F
Sbjct: 324 MMWMGGGMAPPAVMF 338
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA +LDE I Y++SLQ QV+
Sbjct: 217 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 275
Query: 428 LSM 430
+ M
Sbjct: 276 MWM 278
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A+R +A H+L+ER RR++I+E+MK LQ+L+P C+K T KA MLDE I Y++SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 427 FLSMKLATVNPRLDF 441
+ M P + F
Sbjct: 324 MMWMGGGMAPPAVMF 338
>gi|414876674|tpg|DAA53805.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 149
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Query: 403 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN-IEELLAKD 450
+V G AVML EIINYVQSLQRQVEF+SMKLATVNP++D N + +L KD
Sbjct: 33 QVVGNAVMLGEIINYVQSLQRQVEFMSMKLATVNPQVDLNSLPNVLPKD 81
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 94/201 (46%), Gaps = 35/201 (17%)
Query: 321 AAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRG-QATNSHSLA 379
A D++ + D P+ G G++ S+ KE RARR + + +HSL
Sbjct: 74 AEDDDSGERWTEDQVPTDEGICVMGRR-------SESSKERRKITRARRSSRYSQTHSLT 126
Query: 380 ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS----MKLA-- 433
ER RR KI+E +K LQ LVPGC K +A LD+ I Y++SLQ+ V+ +S MK A
Sbjct: 127 ERKRRCKINENLKTLQQLVPGCDKSNNQASTLDKTIRYMKSLQQHVQAMSVGCIMKPAAA 186
Query: 434 --TVNPRLD-------FNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQSQAGLMH 484
+ +P L A + R PSS + F+P +P+V VH +M
Sbjct: 187 GVSYHPFLQPPPYVRPAIAAGGAAPAGMVPRPLPSSMVRFAPVLPMV---VHHPAPLMMM 243
Query: 485 GALP---------GMGNPSDI 496
A P G+ PS+I
Sbjct: 244 PAAPAPLMTYPGAGVAGPSNI 264
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A ML+E + YV++LQ Q
Sbjct: 178 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQ 237
Query: 425 VEFLS 429
++ L+
Sbjct: 238 IQELT 242
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y+++LQ QV+
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQM 439
Query: 428 LSM 430
+SM
Sbjct: 440 MSM 442
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
VRARRG AT+ S+AER RR +IS+R+K LQDLVP K T + MLD ++Y++ L+
Sbjct: 278 CRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELK 337
Query: 423 RQVEFL 428
QVE L
Sbjct: 338 DQVEKL 343
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA +LDE I Y++SLQ QV+
Sbjct: 333 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 391
Query: 428 LSM 430
+ M
Sbjct: 392 MWM 394
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA +LDE I Y++SLQ QV+
Sbjct: 317 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 375
Query: 428 LSM 430
+ M
Sbjct: 376 MWM 378
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A+R +A H+L+ER RR++I+E+MK LQ+L+P C+K T KA MLDE I Y++SLQ Q++
Sbjct: 274 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 332
Query: 427 FLSM 430
+ M
Sbjct: 333 MMWM 336
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQ+L P K T A MLD + +++ LQ+Q
Sbjct: 337 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQ 396
Query: 425 VEFLS 429
V+ L+
Sbjct: 397 VKTLT 401
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H L+ER RR+KI+E MK LQ+L+P C+K T ++ MLD++I YV+SLQ Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQ 331
Query: 427 FLSMKLATVNPRL 439
SM + P +
Sbjct: 332 MFSMGHVMIPPMM 344
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 8/99 (8%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+R +A H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 180 TKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 238
Query: 427 FLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFS 465
LSMK N+ + LQS P +GF+
Sbjct: 239 MLSMKSG-------INLAPMCMPGQLQSMQLPQICMGFT 270
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA +LDE I Y++SLQ QV+
Sbjct: 321 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQMQVQI 379
Query: 428 LSM 430
+ M
Sbjct: 380 MWM 382
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+R +A H+L+ER RR++I+E+MK LQ+L+P C+K KA MLDE I Y+++LQ QV+
Sbjct: 301 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQ 359
Query: 427 FLSM 430
+SM
Sbjct: 360 MMSM 363
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+R +A H+L+ER RR++I+E+MK LQ+L+P C+K KA MLDE I Y+++LQ QV+
Sbjct: 297 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQ 355
Query: 427 FLSM 430
+SM
Sbjct: 356 MMSM 359
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y+++LQ QV+
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQM 495
Query: 428 LSM 430
+SM
Sbjct: 496 MSM 498
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RARRG AT+ S+ R RREKI+ER+K LQ LVP +KV MLDE I+YVQ LQ QV
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKV-DIVTMLDEAIHYVQFLQLQV 501
Query: 426 EFL 428
L
Sbjct: 502 TLL 504
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y+++LQ QV+
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQM 460
Query: 428 LSM 430
+SM
Sbjct: 461 MSM 463
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y+++LQ QV+
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQM 507
Query: 428 LSM 430
+SM
Sbjct: 508 MSM 510
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+++ER RR++I+E+M+ LQ+LVP C+K T KA +LDE I Y++SLQ QV+
Sbjct: 245 RRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 303
Query: 428 LSM 430
+ M
Sbjct: 304 MWM 306
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 353 QTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV-------T 405
+++DP K+ +R +A H+L+ER RR++I+E+MK LQ+L+P C+K+ T
Sbjct: 40 ESADPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSSFTDSQT 99
Query: 406 GKAVMLDEIINYVQSLQRQVEFLSM 430
KA MLDE I Y+++LQ QV+ +
Sbjct: 100 DKASMLDEAIEYLKTLQLQVQIFVL 124
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 308 EFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRA 367
E D G S+ +++NT+ D S + KQ G + V
Sbjct: 230 EMDLGVGFTSTSFGSQENTKTATAVDENDSVCHSDDDDKQKANGKSS----------VST 279
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R +A H+ +ER RR+KI++RMK LQ LVP SK T KA MLDE+I Y++ LQ QV+
Sbjct: 280 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQM 338
Query: 428 LS 429
+S
Sbjct: 339 MS 340
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 18/125 (14%)
Query: 314 GGQSSGEAAKDNTENQRKGDHKPSST-----GNKSAGKQGKQGSQTSDPPKEEYIHVRAR 368
GG+ + A + + K + P++T GNK + G +S R+
Sbjct: 120 GGRDAVPATMETSTETDKKEKVPTTTEGVVMGNKVMKNKAPAGGPSS---------WRSH 170
Query: 369 RGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
G+A H L E+ RR KI+ER+K LQ LVPGCSK + +A LD+ I+Y++SLQ+QV+ +
Sbjct: 171 HGEA---HKLTEKRRRHKINERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQQQVQAM 226
Query: 429 SMKLA 433
S+ LA
Sbjct: 227 SVGLA 231
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 307 IEFDQAKGGQSSGEAAKDNTENQRKG--DHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIH 364
+ +Q KGG E A + + R D + ++ N G+ + P
Sbjct: 77 LSLEQGKGGFLKPEEASGSGKRFRDDVVDGRANTVKNVFHGQPMPTTMAAAPHPPTMRPR 136
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 137 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 195
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 196 VKVLSM 201
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +ISER+K LQDL P K T A MLD + +++ LQ+Q
Sbjct: 361 IRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQ 420
Query: 425 VEFLSMKLA 433
V+ LS + A
Sbjct: 421 VQILSDRKA 429
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A ML+E + YV+ LQ+
Sbjct: 174 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 233
Query: 424 QVEFLS 429
+++ LS
Sbjct: 234 KIQELS 239
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
VRARRG AT+ S+AER RR +IS+R+K LQDLVP K T + MLD + Y++ L+
Sbjct: 150 CRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVEYIKELK 209
Query: 423 RQVEFL 428
QVE L
Sbjct: 210 DQVEKL 215
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 76/131 (58%), Gaps = 16/131 (12%)
Query: 307 IEFDQAKGG-------QSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPK 359
+ DQ KGG +SG+ +D+ + R N G+ + P
Sbjct: 73 LSLDQGKGGFMKPEEASASGKRFRDDVVDNR--------AKNVFHGQPMPTTMPAAPHPP 124
Query: 360 EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 419
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+
Sbjct: 125 AIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVK 183
Query: 420 SLQRQVEFLSM 430
L+ QV+ LSM
Sbjct: 184 FLRLQVKVLSM 194
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER+RR +ISER+K LQ+L P K T A ML+ + Y++ LQRQ
Sbjct: 342 IRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQ 401
Query: 425 VEFLS 429
V+ L+
Sbjct: 402 VKTLT 406
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA MLDE I Y++SLQ Q++
Sbjct: 31 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQV 89
Query: 428 LSM 430
+ M
Sbjct: 90 MWM 92
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 120 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 178
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 179 VKVLSM 184
>gi|215715238|dbj|BAG94989.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 124
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Query: 430 MKLATVNPRLDFNIEELLAKDVLQSRA-GPSSTLGFSPDM--PLVYPPVHQSQAGLMHGA 486
MKLA+VNP LDFNIE +L+KD+ Q R SS GF PD+ P ++PP + +Q G
Sbjct: 1 MKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVHPRLHPPKY-TQVG----- 54
Query: 487 LPGMGNPSDILRRTINSQLTPMTGGFKEPSQ 517
+P + NP+D R I++ L FKEP
Sbjct: 55 MPSIVNPTDAFGRVIHAPLG-TNSAFKEPKH 84
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+E+++ LQ+LVP C+K T KA +LDE I Y++SLQ QV+
Sbjct: 225 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 283
Query: 428 LSMKLATV 435
+ M V
Sbjct: 284 MWMTTGIV 291
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AER RR +IS+R++ LQDLVP K T + MLD ++Y++ LQ Q
Sbjct: 300 VRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 359
Query: 425 VEFL 428
+E L
Sbjct: 360 IEKL 363
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R +R +A H+L+E+ RR KI+E+MK LQ LVP SK T KA MLD+ I Y++ LQ QV
Sbjct: 45 RGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKHLQLQV 103
Query: 426 EFLSMKLATVNPRLDF 441
+ LSM+ P ++
Sbjct: 104 QMLSMRNGVYRPSVNL 119
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 123 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 181
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 182 VKVLSM 187
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+RR H+L E+ RR KI+ER+K LQ LVPGCSK + +A LD+ I+Y++SLQ+QV+
Sbjct: 188 SRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSK-SNQASTLDQTIHYMKSLQQQVQ 246
Query: 427 FLSMKLA 433
+S+ LA
Sbjct: 247 AMSVGLA 253
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 188
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 189 VKVLSM 194
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 135 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 193
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 194 VKVLSM 199
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 50/206 (24%)
Query: 232 GASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPS 291
G +NG+ L + KG S H + ++ S SGG GT EP
Sbjct: 644 GVTNGAVLASSDKGASHGTQHPDVQEPTITSS--------SGG---------YGTSIEPL 686
Query: 292 AKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQG 351
K +S KRK + ++ Q++ G+ K HKP +TG +G
Sbjct: 687 QKVRTSNKRKCSEREETECQSEDGEDESVDTK----------HKPITTG---------RG 727
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
S T +R +A H+ +ER RR++I+E+M+ LQ+L+P +K T KA ML
Sbjct: 728 STT-------------KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASML 773
Query: 412 DEIINYVQSLQRQVEFLSMKLATVNP 437
DE I+Y++ LQ Q++ +S++ P
Sbjct: 774 DEAIDYLKILQLQLQMMSIRTGMTLP 799
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA+RG AT+ S+ R RREKI+ER+K LQ+LVP +KV MLDE I+YV+ LQ QV
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKV-DIVTMLDEAIHYVKFLQTQV 501
Query: 426 EFL 428
E L
Sbjct: 502 ELL 504
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 338 STGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 397
STG S G + P +RA+RG AT+ S+AERVRR +ISERM+ LQ+L
Sbjct: 2 STGRSSGGLLAAENLLQDSVP----CRLRAKRGCATHPRSIAERVRRTRISERMRRLQEL 57
Query: 398 VPGCSKVTGKAVMLDEIINYVQSLQRQV 425
VP K T + MLDE + Y++ LQ+QV
Sbjct: 58 VPNMDKQTNTSDMLDEAVEYMKFLQKQV 85
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+
Sbjct: 137 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 195
Query: 424 QVEFLSM 430
QV+ LSM
Sbjct: 196 QVKILSM 202
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 65/113 (57%), Gaps = 6/113 (5%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R +A H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 160
Query: 428 LSMK--LATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQS 478
LSM+ + P L IE A + + G + T S V PPV+QS
Sbjct: 161 LSMRNGVYLNPPYLSGTIEPAQASQMFAAVGGGNITASSS---GAVMPPVNQS 210
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A ML+E + YV+ LQ+
Sbjct: 104 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 163
Query: 424 QVEFLS 429
+++ LS
Sbjct: 164 KIQELS 169
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+E+++ LQ+LVP C+K T KA +LDE I Y++SLQ QV+
Sbjct: 222 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 280
Query: 428 LSMKLATV 435
+ M V
Sbjct: 281 MWMTTGIV 288
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+
Sbjct: 126 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 184
Query: 424 QVEFLSM 430
QV+ LSM
Sbjct: 185 QVKVLSM 191
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y+++LQ QV+
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQM 407
Query: 428 LSM 430
++M
Sbjct: 408 MAM 410
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 347 QGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTG 406
Q GS SDP + R +R +A H+L+E+ RR +I+E+MK LQ L+P SK T
Sbjct: 25 QDALGSSESDPARPA--RPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TD 81
Query: 407 KAVMLDEIINYVQSLQRQVEFLSMK 431
KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 82 KASMLDDAIEYLKHLQLQVQMLSMR 106
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AER RR +IS+R++ LQDLVP K T + MLD ++Y++ LQ Q
Sbjct: 295 VRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 354
Query: 425 VEFL 428
+E L
Sbjct: 355 IEKL 358
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 4/69 (5%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R+ G+A H+L E+ RR KI+ER+K LQ LVPGCSK + +A LD+ I+Y++SLQ QV
Sbjct: 162 RSHHGEA---HNLTEKRRRHKINERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQHQV 217
Query: 426 EFLSMKLAT 434
+ +S+ LA+
Sbjct: 218 QAMSVGLAS 226
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 12/117 (10%)
Query: 319 GEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRAR----RGQATN 374
G AK++ E R+G + G+ S + +G++ ++ P E VR R R +A
Sbjct: 76 GYFAKESAE--RRGVSMENDLGDLSCDSE--KGAEVAEVPSET---VRPRNSSKRSRAAE 128
Query: 375 SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 431
H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 129 VHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTMR 184
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +IS R+K LQDL P K T A MLD + Y++ LQ+Q
Sbjct: 360 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQ 419
Query: 425 VEFL 428
V+ L
Sbjct: 420 VKIL 423
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
GS SDP + R +R +A H+L+E+ RR +I+E+MK LQ L+P SK T KA M
Sbjct: 27 GSSESDPARP--ARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASM 83
Query: 411 LDEIINYVQSLQRQVEFLSMK 431
LD+ I Y++ LQ QV+ LSM+
Sbjct: 84 LDDAIEYLKHLQLQVQMLSMR 104
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
GS SDP + R +R +A H+L+E+ RR +I+E+MK LQ L+P SK T KA M
Sbjct: 27 GSSESDPARPA--RPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASM 83
Query: 411 LDEIINYVQSLQRQVEFLSMK 431
LD+ I Y++ LQ QV+ LSM+
Sbjct: 84 LDDAIEYLKHLQLQVQMLSMR 104
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
GS SDP + R +R +A H+L+E+ RR +I+E+MK LQ L+P SK T KA M
Sbjct: 28 GSSESDPARP--ARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASM 84
Query: 411 LDEIINYVQSLQRQVEFLSMK 431
LD+ I Y++ LQ QV+ LSM+
Sbjct: 85 LDDAIEYLKQLQLQVQMLSMR 105
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +IS+R+K LQ L P K T A MLD + Y++ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381
Query: 425 VEFLS 429
V+ L+
Sbjct: 382 VQILT 386
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +IS+R+K LQ L P K T A MLD + Y++ LQ Q
Sbjct: 319 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 378
Query: 425 VEFLS 429
V+ L+
Sbjct: 379 VQILT 383
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Query: 302 RNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEE 361
R G+ + D A G SS K TE R + K+ ++ +E
Sbjct: 1075 RRGKAVAIDTA--GTSSSGVCKAETEPVRIQPETETEIAEDRKQKEREETIVEIQGTEEA 1132
Query: 362 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
+R +A H+LAER RREKI+E+MK LQ+L+P C+K T K L+++I Y++SL
Sbjct: 1133 RGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYMKSL 1191
Query: 422 QRQVEFLS 429
Q Q++ +S
Sbjct: 1192 QMQIQMMS 1199
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 12/105 (11%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R +A H+LAER RREKI+E+MK LQ+L+P C+K T K L+++I YV+SL+ Q++
Sbjct: 1569 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYVKSLEMQIQH 1627
Query: 428 LSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVY 472
M + E L+++ +L + + G S MP++Y
Sbjct: 1628 YVMNFRIMT-------EVLISESMLLCKM---MSTGCS-TMPMMY 1661
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R +A H+LAER RREKI+E+MK LQ+L+P C+K T K LD I YV+ LQ Q++
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLDAAIEYVKWLQSQIQM 193
Query: 428 LSM 430
+ M
Sbjct: 194 ILM 196
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R + H+LAER RREKI+E +K LQ+L+P C+K T K LD+ I YV+ LQ Q++
Sbjct: 581 KRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKST-KVSTLDDAIEYVKWLQSQIQM 639
Query: 428 LS 429
+S
Sbjct: 640 MS 641
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +IS R+K LQDL P K T A MLD + Y++ LQ+Q
Sbjct: 356 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQ 415
Query: 425 VEFL 428
V+ L
Sbjct: 416 VKML 419
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+E+++ LQ+LVP C+K T KA +LDE I Y++SLQ QV+
Sbjct: 325 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 383
Query: 428 LSMKLATV 435
+ M V
Sbjct: 384 MWMTTGIV 391
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+E+++ LQ+LVP C+K T KA +LDE I Y++SLQ QV+
Sbjct: 401 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 459
Query: 428 LSMKLATV 435
+ M V
Sbjct: 460 MWMTTGIV 467
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+E+++ LQ+LVP C+K T KA +LDE I Y++SLQ QV+
Sbjct: 226 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 284
Query: 428 LSMKLATV 435
+ M V
Sbjct: 285 MWMTTGIV 292
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+R + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y+++LQ QV+
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQM 217
Query: 428 LSM 430
++M
Sbjct: 218 MAM 220
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARR ++ H+ +ER RR+KI+E++K LQ+L+P C+K T K MLDE I+Y++SLQ Q++
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQLQ 72
Query: 427 FLSM 430
L M
Sbjct: 73 MLVM 76
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A+R + H+++ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y+++LQ QV+
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQ 315
Query: 427 FLSM 430
+SM
Sbjct: 316 MMSM 319
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y+++LQ QV+
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQ 389
Query: 427 FLSM 430
+SM
Sbjct: 390 MMSM 393
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A+R +A H+L+ER RR++I+E+M+ LQ+LVP C+K T KA MLDE I Y++SLQ Q++
Sbjct: 233 AKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNK-TDKASMLDEAIEYLKSLQLQLQ 291
Query: 427 FL 428
+
Sbjct: 292 VM 293
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y+++LQ QV+
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQ 389
Query: 427 FLSM 430
+SM
Sbjct: 390 MMSM 393
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 329 QRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKIS 388
R G K S + + + T +P + A+R +A H+L+ER RR++I+
Sbjct: 275 HRSGKRKQSVDATDAEDVEFESADVTCEPAHKT---ATAKRRRAAEVHNLSERRRRDRIN 331
Query: 389 ERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
E+MK LQ+L+P C+K T KA MLDE I Y++SLQ Q++
Sbjct: 332 EKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 368
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A+R + H+L+ER RR++I+E+M+ LQ+L+P C+KV K+ ML+E I Y+++LQ QV+
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKSSMLEEAIEYLKTLQLQVQ 376
Query: 427 FLSM 430
+SM
Sbjct: 377 MMSM 380
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P RA+RG AT+ S+AER RR +IS+R+K LQDLVP K T + MLD + Y
Sbjct: 86 PDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTY 145
Query: 418 VQSLQRQVEFL 428
++ LQ QVE L
Sbjct: 146 IKELQGQVEKL 156
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 6/114 (5%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 80
Query: 427 FLSMKLAT-VNP-RLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQS 478
LSM+ +NP L +E A + + G + T+ P V PPV+QS
Sbjct: 81 MLSMRNGVYLNPSYLSGALEPAQASQMFAALGGNNVTV-VHPGT--VMPPVNQS 131
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y+++LQ QV+
Sbjct: 115 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQ 173
Query: 427 FLSM 430
+SM
Sbjct: 174 MMSM 177
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 10/99 (10%)
Query: 336 PSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ 395
P STG S G + P +RA+RG AT+ S+AERVRR +ISERM+ LQ
Sbjct: 391 PISTGRSSGGLLAAENLLQDSVP----CRLRAKRGCATHPRSIAERVRRTRISERMRRLQ 446
Query: 396 DLVPGCSKV------TGKAVMLDEIINYVQSLQRQVEFL 428
+LVP K T + MLDE + Y++ LQ+QV+ L
Sbjct: 447 ELVPNMDKSLAVIQQTNTSDMLDEAVEYMKFLQKQVDDL 485
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A+R +A H+L+ER RR++I+E+MK LQ+L+P C+K KA MLDE I Y++SLQ Q++
Sbjct: 247 AKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKAD-KASMLDEAIEYLKSLQLQLQ 305
Query: 427 FLSM 430
+ M
Sbjct: 306 VVWM 309
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 80/133 (60%), Gaps = 18/133 (13%)
Query: 307 IEFDQAKGG-----QSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDP-PKE 360
+ DQ KG +G+ +D+ + R KP G+ SQ + P P +
Sbjct: 85 LSLDQGKGHGFLKPDETGKRFQDDVLDNRCSSMKPIF--------HGQPMSQPAPPMPHQ 136
Query: 361 EYI---HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
+ VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++Y
Sbjct: 137 QSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDY 195
Query: 418 VQSLQRQVEFLSM 430
V+ L+ QV+ LSM
Sbjct: 196 VKFLRLQVKVLSM 208
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 78/151 (51%), Gaps = 15/151 (9%)
Query: 289 EPSAKGLSSKKRK----RNGQDIEFDQAKGGQS--SGEAAKDNTENQRKGDHKPSSTGNK 342
EP A L K+K RN Q K GQS + + A D + ++ + + P +
Sbjct: 190 EPIANTLDDMKKKARVTRNVQKTR----KVGQSKKNQKNAPDISHDEEESNAGPDGQSSS 245
Query: 343 SAGKQGKQGSQTSDPPKEEYIH----VRARRGQATNSHSLAERVRREKISERMKFLQDLV 398
S + SQ SD ++ RA RG AT+ SL R RRE+I+ER+K LQ+LV
Sbjct: 246 SCSSEEDNASQDSDSKVSGVLNSNGKTRATRGAATDPQSLYARKRRERINERLKILQNLV 305
Query: 399 PGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
P +KV + ML+E ++YV LQ Q++ LS
Sbjct: 306 PNGTKV-DISTMLEEAVHYVNFLQLQIKLLS 335
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+ L+ Q
Sbjct: 148 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 206
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 207 VKVLSM 212
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 68.6 bits (166), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+RG+A H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y+++LQ QV+
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 58
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 427 FLSMKLAT-VNP-RLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQS 478
LSM+ +NP L +E A + + G + T+ V PPV+QS
Sbjct: 158 MLSMRNGVYLNPSYLSGALEPAQASQMFAALGGNNVTVAHPGT---VMPPVNQS 208
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y+++LQ QV+
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQ 268
Query: 427 FLSM 430
+SM
Sbjct: 269 MMSM 272
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+RG+ H+++ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQM 379
Query: 428 LS 429
+S
Sbjct: 380 MS 381
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
+R +A H+LAER RREKI+ERMK LQ L+P C+K T K ML+++I YV+SL+ Q+
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQI 203
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+RG+ H+++ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQM 379
Query: 428 LS 429
+S
Sbjct: 380 MS 381
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+R +A H+L+ER RR++I+E+MK LQ+L+P +K + KA MLDE I+Y++SLQ QV+
Sbjct: 254 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNK-SDKASMLDEAIDYLKSLQLQVQ 312
Query: 427 FLSM 430
+SM
Sbjct: 313 MMSM 316
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P RA+RG AT+ S+AER RR +IS+R+K LQDLVP K T + MLD + Y
Sbjct: 302 PDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTY 361
Query: 418 VQSLQRQVEFL 428
++ LQ QVE L
Sbjct: 362 IKELQGQVEKL 372
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P RA+RG AT+ S+AER RR +IS+R+K LQDLVP K T + MLD + Y
Sbjct: 302 PDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTY 361
Query: 418 VQSLQRQVEFL 428
++ LQ QVE L
Sbjct: 362 IKELQGQVEKL 372
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+RG+ H+++ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y+++LQ QV+
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 324
Query: 428 LS 429
+S
Sbjct: 325 MS 326
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
+RG+ H+++ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y+++LQ QV+
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQM 383
Query: 428 LS 429
+S
Sbjct: 384 MS 385
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+ +ER RR++I+E+MK LQ+LVP C+K + KA +LDE I Y++SLQ QV+
Sbjct: 140 RRARAAEVHNQSERRRRDRINEKMKALQELVPHCNK-SDKASILDEAIEYLKSLQLQVQI 198
Query: 428 LSM 430
+ M
Sbjct: 199 MWM 201
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P RA+RG AT+ S+AER RR +IS+R+K LQDLVP K T + MLD + Y
Sbjct: 149 PDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTY 208
Query: 418 VQSLQRQVEFL 428
++ LQ QVE L
Sbjct: 209 IKELQGQVEKL 219
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 323 KDNTENQRKGDHKPSSTGNKSAGKQGKQG-SQTSDPPKEEYIHVRARRGQATNSHSLAER 381
+DN + ++ HK S+ G K+G S +P + RA++G A + S+A R
Sbjct: 367 QDNNRDAKR--HKGSTAQRTRFGASSKRGNSHKREPALNTNLKPRAKQGCANDPQSIAAR 424
Query: 382 VRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
RRE+IS+R+K LQ+L+P SKV ML++ INYV+ LQ QV+ L
Sbjct: 425 QRRERISDRLKILQELIPNGSKVD-LVTMLEKAINYVKFLQLQVKVL 470
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+ L+ Q
Sbjct: 139 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 197
Query: 425 VEFLSM 430
V+ LSM
Sbjct: 198 VKVLSM 203
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 427 FLSMK 431
LSM+
Sbjct: 229 MLSMR 233
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 356 DPPKEEYIHVR----ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
D +EE + R ++R +AT H+L+ER RR++I+++M+ LQDL+P +KV KA ML
Sbjct: 362 DLEEEEQVPARGSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKV-DKASML 420
Query: 412 DEIINYVQSLQRQVEFLSM 430
E I+Y++SLQ QV+ +SM
Sbjct: 421 GEAIDYLKSLQLQVQMMSM 439
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 356 DPPKEEYIHVR----ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
D +EE + R ++R +AT H+L+ER RR++I+++M+ LQDL+P +KV KA ML
Sbjct: 356 DLEEEEQVPARGSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKV-DKASML 414
Query: 412 DEIINYVQSLQRQVEFLSM 430
E I+Y++SLQ QV+ +SM
Sbjct: 415 GEAIDYLKSLQLQVQMMSM 433
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 427 FLSMK 431
LSM+
Sbjct: 229 MLSMR 233
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
V +R +A H+ +ER RR+KI++RMK LQ LVP SK T KA MLDE+I Y++ LQ Q
Sbjct: 209 VSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 267
Query: 425 VEFLS 429
V +S
Sbjct: 268 VSMMS 272
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
RR ++ + H+ +ER RR++I+E++K LQ+L+P C+K T K MLDE I+Y++SLQ Q++
Sbjct: 16 TRRSRSADFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQ 74
Query: 427 FLSM 430
L M
Sbjct: 75 MLVM 78
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I Y++ LQ QV+
Sbjct: 220 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQM 278
Query: 428 LSMK 431
+S++
Sbjct: 279 MSVR 282
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
RR ++ H+ +ER RR+KI+E++K LQ+L+P C+K T K MLDE I+Y++SLQ Q++
Sbjct: 14 TRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQLQ 72
Query: 427 FLSM 430
L M
Sbjct: 73 MLVM 76
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Query: 380 ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
+R+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 151 QRLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 200
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 6/114 (5%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 427 FLSMKLAT-VNP-RLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQS 478
LSM+ +NP L +E A + + G + T+ P V PPV+QS
Sbjct: 158 MLSMRNGVYLNPSYLSGALEPAQASQMFAALGGNNVTV-VHPGT--VMPPVNQS 208
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I Y++ LQ QV+
Sbjct: 182 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQM 240
Query: 428 LSMK 431
+S++
Sbjct: 241 MSVR 244
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AER RR +IS+R+K LQDLVP K T + MLD ++Y++ L+ +
Sbjct: 281 VRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDR 340
Query: 425 VEFL 428
VE L
Sbjct: 341 VEKL 344
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 38/47 (80%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 404
P + VRARRGQAT+ HS+AER+RRE+I+ERMK LQ+LVP +KV
Sbjct: 234 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKV 280
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA RG AT+ SL R RRE+I+ER++ LQ+LVP +KV + ML+E +NYV+ LQ Q
Sbjct: 264 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQLQ 322
Query: 425 VEFLS 429
++ LS
Sbjct: 323 IKLLS 327
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
V +R +A H+ +ER RR+KI++RMK LQ LVP SK T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 425 VEFLS 429
V +S
Sbjct: 266 VSMMS 270
>gi|357504213|ref|XP_003622395.1| BHLH transcription factor [Medicago truncatula]
gi|355497410|gb|AES78613.1| BHLH transcription factor [Medicago truncatula]
Length = 141
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Query: 383 RREKISERMKFLQDLVPGCSK-VTGKAVMLDEIINYVQSLQRQVEFLSMKLAT-VNPRLD 440
RREKISER+K L+DLVP +K V GK +ML EIINY+QSLQ QVE + + ++ R++
Sbjct: 60 RREKISERIKMLEDLVPRYTKLVIGKTLMLYEIINYIQSLQHQVEIHAYVFSIFLHERIN 119
Query: 441 F 441
F
Sbjct: 120 F 120
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
V +R +A H+ +ER RR+KI++RMK LQ LVP SK T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 425 VEFLS 429
V +S
Sbjct: 266 VSMMS 270
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 5/127 (3%)
Query: 354 TSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
TSD P+ ++R +A H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE
Sbjct: 146 TSDRPRGGGG-SGSKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDE 203
Query: 414 IINYVQSLQRQVEFLSMKLAT-VNP-RLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLV 471
I Y++ LQ QV+ LSM+ +NP L +E + A + + G S +P V
Sbjct: 204 AIEYLKQLQLQVQMLSMRNGVYLNPSYLSGALEPVQASQMFAA-LGASGRNVAAPSSGAV 262
Query: 472 YPPVHQS 478
PPV+QS
Sbjct: 263 APPVNQS 269
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 327 ENQRKGD-HKPSSTGNKSAGKQGKQG-SQTSDPPKEEYIHVRARRGQATNSHSLAERVRR 384
EN R HK S+ G K+G S +P + RA++G A + S+A R RR
Sbjct: 368 ENNRDAKRHKGSTAQRTRFGASSKRGNSHKREPALNTNLKPRAKQGCANDPQSIAARQRR 427
Query: 385 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
E+IS+R+K LQ+L+P SKV ML++ INYV+ LQ QV+ L
Sbjct: 428 ERISDRLKILQELIPNGSKVD-LVTMLEKAINYVKFLQLQVKVL 470
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
RR ++ + H+ +ER RR++I+E+++ LQ+L+P C+K T K MLDE I+Y++SLQ Q++
Sbjct: 16 TRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQ 74
Query: 427 FLSM 430
L M
Sbjct: 75 MLVM 78
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
RR ++ H+ +ER RR++I+E++K LQ+L+P C+K T K MLDE I+Y++SLQ Q++
Sbjct: 15 TRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQ 73
Query: 427 FLSM 430
L M
Sbjct: 74 MLVM 77
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RAR+G A + S+A RVRRE+ISER+K LQ L+P KV ML++ I YVQ L+ Q+
Sbjct: 755 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAITYVQCLELQI 813
Query: 426 EFLSMKLATVNPR----LDFNIEELL 447
+ L K ++ P+ L ++ELL
Sbjct: 814 KML--KNDSIWPKALGPLPNTLQELL 837
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 14/146 (9%)
Query: 297 SKKRKRNGQDIEFDQAKGGQSSGE---AAKDNTENQRKGDHKPSSTGNKS-----AGKQG 348
SKKR RN D + ++ + + +N E G + P+S+G S A +
Sbjct: 183 SKKRSRNSGDAQKNKRNASSKKSQKVASTSNNDEGSNAGLNGPASSGCCSEDESNASHEL 242
Query: 349 KQGSQTSDPPKEEYI-----HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
+G+ +S K RA RG AT+ SL R RRE+I+ER++ LQ LVP +K
Sbjct: 243 NRGASSSLSSKGTATLNSSGKTRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTK 302
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLS 429
V + ML+E + YV+ LQ Q++ LS
Sbjct: 303 V-DISTMLEEAVQYVKFLQLQIKLLS 327
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R +R +A H+L+E+ RR +I+E+MK LQ L+P SK T KA MLD+ I Y++ LQ QV
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 85
Query: 426 EFLSMK 431
+ LSM+
Sbjct: 86 QMLSMR 91
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R +R +A H+L+E+ RR +I+E+MK LQ L+P SK T KA MLD+ I Y++ LQ QV
Sbjct: 49 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 107
Query: 426 EFLSMK 431
+ LSM+
Sbjct: 108 QMLSMR 113
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R +R +A H+L+E+ RR +I+E+MK LQ L+P SK T KA MLD+ I Y++ LQ QV
Sbjct: 49 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 107
Query: 426 EFLSMK 431
+ LSM+
Sbjct: 108 QMLSMR 113
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA RG AT+ SL R RRE+I+ER++ LQ+LVP +KV + ML+E +NYV+ LQ Q
Sbjct: 261 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQLQ 319
Query: 425 VEFLS 429
++ LS
Sbjct: 320 IKLLS 324
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Query: 363 IHVRAR-----RGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
+H R R R ++T H L ER RR++ +++M+ LQDL+P C K KA +LDE I Y
Sbjct: 216 VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEAIKY 274
Query: 418 VQSLQRQVEFLSMKLATVNP 437
+++LQ QV+ +SM + P
Sbjct: 275 MRTLQLQVQMMSMGNGLIRP 294
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Query: 363 IHVRAR-----RGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
+H R R R ++T H L ER RR++ +++M+ LQDL+P C K KA +LDE I Y
Sbjct: 216 VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEAIKY 274
Query: 418 VQSLQRQVEFLSMKLATVNP 437
+++LQ QV+ +SM + P
Sbjct: 275 MRTLQLQVQMMSMGNGLIRP 294
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RAR+G A + S+A RVRRE+ISER+K LQ L+P KV ML++ I+YVQ L+ Q+
Sbjct: 640 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAISYVQCLEFQI 698
Query: 426 EFL 428
+ L
Sbjct: 699 KML 701
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQ--DLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
ARR +A H+L+ER RR++I+E+M+ LQ +L+P C+K T KA MLDE I Y++SLQ Q
Sbjct: 162 ARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNK-TDKASMLDEAIEYLKSLQLQ 220
Query: 425 VEFLSMKLATVNPRLDFNIEELLAK 449
+ + M P + + + L +
Sbjct: 221 LRVMWMGSGMAPPLMFPGVHQYLPR 245
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 135 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 193
Query: 427 FLSMK 431
LSM+
Sbjct: 194 MLSMR 198
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RAR+G A + S+A R RRE+IS+R+K LQ+LVP +KV ML++ INYV+ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 426 EFLS 429
+ L+
Sbjct: 418 KVLT 421
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+RR +H+L E+ RR KI+ER+K LQ +VPGCSK + +A LD+ I+Y++SLQ QV+
Sbjct: 172 SRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSK-SNQASTLDQTIHYMKSLQHQVQ 230
Query: 427 FLS 429
+S
Sbjct: 231 AMS 233
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
H RR +A H+ +ER RR++I+E+M+ LQ+L+P C+K KA +LDE I Y++SLQ
Sbjct: 199 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKAD-KASILDEAIEYLKSLQM 257
Query: 424 QVEFLSM 430
QV+ + M
Sbjct: 258 QVQVMWM 264
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 346 KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 405
++G +G P K ++R +A H+L+E+ RR +I+E+MK LQ+L+P +K T
Sbjct: 121 EEGLEGLILEAPAKPTTSRNPSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-T 179
Query: 406 GKAVMLDEIINYVQSLQRQVEFLSMK 431
KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 180 DKASMLDEAIEYLKQLQLQVQMLTMR 205
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
V +R +A H+ +ER RR+KI++RMK LQ LVP SK T KA MLDE+I Y++ LQ Q
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 322
Query: 425 VEFL 428
V+ +
Sbjct: 323 VQMM 326
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 352 SQTSDPPKEEYIH--VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 409
S+ DP K ++ RA RG AT+ SL R RRE+I+ER++ LQ+LVP +KV +
Sbjct: 251 SKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DIST 309
Query: 410 MLDEIINYVQSLQRQVEFLS 429
ML+E ++YV+ LQ Q++ LS
Sbjct: 310 MLEEAVHYVKFLQLQIKLLS 329
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 299 KRKRNGQDIEFDQAKGGQSSGEAA-KDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDP 357
KRK N DI +Q K +++ K TE+Q+K G S Q +S+
Sbjct: 160 KRKVNNGDISDNQKKKTRTTSNVQRKKKTEDQKKRGENVEEEGQSSISYNSDQEENSSEE 219
Query: 358 PKE----------EYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGK 407
RA RG AT+ SL R RRE+I+ER++ LQ LVP +KV
Sbjct: 220 ANGGGSGATSDGGVNRKSRASRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV-DI 278
Query: 408 AVMLDEIINYVQSLQRQVEFLS 429
+ ML+E ++YV+ LQ Q++ LS
Sbjct: 279 STMLEEAVHYVKFLQLQIKLLS 300
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
RR ++ + H+ +ER RR++I+E+++ LQ+L+P C+K T K MLDE I+Y++SLQ Q++
Sbjct: 15 TRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQ 73
Query: 427 FLSM 430
L M
Sbjct: 74 MLVM 77
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 335 KPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRA-RRGQATNSHSLAERVRREKISERMKF 393
K +T SA G + K E + + RR +A H+ +ER RR++I+++MK
Sbjct: 210 KAKTTDEDSASHGGSENQDEDRETKTETVRSHSSRRTRAAAVHNQSERRRRDRINQKMKA 269
Query: 394 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 431
LQ LVP SK T KA MLDE+I Y++ LQ QV+ +S++
Sbjct: 270 LQKLVPNASK-TDKASMLDEVIEYLKQLQAQVQAMSVR 306
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 160
Query: 427 FLSMK 431
LSM+
Sbjct: 161 MLSMR 165
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 373 TNSHSLAERV----------------------RREKISERMKFLQDLVPGCSKVTGKAVM 410
T+ HS+AERV RRE+I+ERMK LQ+LVP +K T KA M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 411 LDEIINYVQSLQRQVEFLSM 430
LDEII+YV+ LQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 373 TNSHSLAERV----------------------RREKISERMKFLQDLVPGCSKVTGKAVM 410
T+ HS+AERV RRE+I+ERMK LQ+LVP +K T KA M
Sbjct: 219 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 277
Query: 411 LDEIINYVQSLQRQVEFLSM 430
LDEII+YV+ LQ QV+ LSM
Sbjct: 278 LDEIIDYVKFLQLQVKVLSM 297
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
H RR +A H+ +ER RR++I+E+M+ LQ+L+P C+K KA +LDE I Y++SLQ
Sbjct: 190 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKAD-KASILDEAIEYLKSLQM 248
Query: 424 QVEFLSM 430
QV+ + M
Sbjct: 249 QVQVMWM 255
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+++E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 154 SKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 212
Query: 427 FLSMK 431
LSM+
Sbjct: 213 MLSMR 217
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Query: 317 SSGEAAKD-NTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNS 375
SSG D N +R+G + G+ S +G G P ++R ++
Sbjct: 143 SSGAVDSDTNAPLKRRGLSSENDLGDFSCDSEG--GDLPEVPSSTNLPRNSSKRSRSAEV 200
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 431
H+++E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 201 HNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 255
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
H RR +A H+ +ER RR++I+E+M+ LQ+L+P C+K KA +LDE I Y++SLQ
Sbjct: 228 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKAD-KASILDEAIEYLKSLQM 286
Query: 424 QVEFLSM 430
Q++ + M
Sbjct: 287 QLQIMWM 293
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R RR + H+L+E+ RREKI+++M+ L++L+P C+KV KA MLD+ I+Y+++L+ Q+
Sbjct: 321 RVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNKV-DKASMLDDAIDYLKTLKLQL 379
Query: 426 EFLSM 430
+ +SM
Sbjct: 380 QIMSM 384
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 352 SQTSDPPKEEYIH--VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 409
S+ DP K ++ RA RG AT+ SL R RRE+I+ER++ LQ+LVP +KV +
Sbjct: 251 SKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DIST 309
Query: 410 MLDEIINYVQSLQRQVEFLS 429
ML+E ++YV+ LQ Q++ LS
Sbjct: 310 MLEEAVHYVKFLQLQIKLLS 329
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 352 SQTSDPPKEEYIH--VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 409
S+ DP K ++ RA RG AT+ SL R RRE+I+ER++ LQ+LVP +KV +
Sbjct: 248 SKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DIST 306
Query: 410 MLDEIINYVQSLQRQVEFLS 429
ML+E ++YV+ LQ Q++ LS
Sbjct: 307 MLEEAVHYVKFLQLQIKLLS 326
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 19/142 (13%)
Query: 291 SAKGLSSKKRKRNGQDIEFDQA--KGGQSSGEAAKD-NTENQRKGDHKPSSTGNKSAGKQ 347
+A+ SKK RNG E A G SSG +++ N + G +S S
Sbjct: 136 NAESKKSKKVDRNGNKAEETNASVDGHSSSGYTSEEHNMYEENSGGTTSASKSTMSLNSN 195
Query: 348 GKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGK 407
GK RA RG AT+ SL R RREKI+ER++ LQ+LVP +KV
Sbjct: 196 GK---------------ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKV-DI 239
Query: 408 AVMLDEIINYVQSLQRQVEFLS 429
+ ML++ I+YV+ LQ Q++ LS
Sbjct: 240 STMLEDAIHYVKFLQLQIKLLS 261
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R ++ HSL+E+ RR++I+++M+ LQ+L+P C KV K +LDE I+Y+++LQ QV+
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKV-DKISILDEAIDYLKTLQLQVQ 437
Query: 427 FLSM 430
+SM
Sbjct: 438 VMSM 441
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA RG AT+ SL R RRE+I+ER+K LQ+LVP +KV + ML+E + YV+ LQ Q+
Sbjct: 256 RASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQI 314
Query: 426 EFLS 429
+ LS
Sbjct: 315 KLLS 318
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RAR+G A + S+A RVRRE+ISER+K LQ L+P KV ML++ I+YVQ L+ Q+
Sbjct: 823 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAISYVQCLEFQI 881
Query: 426 EFL 428
+ L
Sbjct: 882 KML 884
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P + + RA RG AT+ SL R RRE+I+ER++ LQ+LVP +KV + ML+E + Y
Sbjct: 180 PSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQY 238
Query: 418 VQSLQRQVEFLS 429
V+ LQ Q++ LS
Sbjct: 239 VKFLQLQIKLLS 250
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 373 TNSHSLAERV----------------------RREKISERMKFLQDLVPGCSKVTGKAVM 410
T+ HS+AERV RRE+I+ERMK LQ+LVP +K T KA M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 411 LDEIINYVQSLQRQVEFLSM 430
LDEII+YV+ LQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA RG AT+ SL R RRE+I+ER+K LQ+LVP +KV + ML+E + YV+ LQ Q+
Sbjct: 260 RASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQI 318
Query: 426 EFLS 429
+ LS
Sbjct: 319 KLLS 322
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA RG AT+ SL R RRE+I+ER+K LQ+LVP +KV + ML+E + YV+ LQ Q+
Sbjct: 255 RASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQI 313
Query: 426 EFLS 429
+ LS
Sbjct: 314 KLLS 317
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +IS R+K LQDLVP K T A MLD + +++ LQ +
Sbjct: 299 IRAKRGCATHPRSIAERERRTRISGRLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQGE 358
Query: 425 VEFLSMKL 432
V+ L +L
Sbjct: 359 VQKLHKEL 366
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISERM+ LQ+L P K T A LD I ++ LQ+Q
Sbjct: 336 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQKQ 395
Query: 425 VEFLS 429
V+ L+
Sbjct: 396 VKSLA 400
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 358 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
P + + RA RG AT+ SL R RRE+I+ER++ LQ+LVP +KV + ML+E + Y
Sbjct: 180 PSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQY 238
Query: 418 VQSLQRQVEFLS 429
V+ LQ Q++ LS
Sbjct: 239 VKFLQLQIKLLS 250
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 121 SKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 179
Query: 427 FL 428
+L
Sbjct: 180 YL 181
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 19/142 (13%)
Query: 291 SAKGLSSKKRKRNGQDIEFDQAK--GGQSSGEAAKD-NTENQRKGDHKPSSTGNKSAGKQ 347
+A+ SKK RNG E A G SSG +++ N + G +S S
Sbjct: 122 NAESKKSKKVDRNGNKAEETNASVDGHSSSGYTSEEHNMYEENSGGTTSASKSTMSLNSN 181
Query: 348 GKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGK 407
GK RA RG AT+ SL R RREKI+ER++ LQ+LVP +KV
Sbjct: 182 GK---------------ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKV-DI 225
Query: 408 AVMLDEIINYVQSLQRQVEFLS 429
+ ML++ I+YV+ LQ Q++ LS
Sbjct: 226 STMLEDAIHYVKFLQLQIKLLS 247
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AERVRR +ISE++K L+ L P K T A MLD + Y++ LQ Q
Sbjct: 167 IRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQEQ 226
Query: 425 VEFLS 429
V+ L+
Sbjct: 227 VKTLT 231
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Query: 363 IHVRAR-----RGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 417
+H R R R ++T H L ER RR++ +++M+ LQD++P C K KA +LDE + Y
Sbjct: 213 VHARIRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDILPNCYK-DDKASLLDEAVKY 271
Query: 418 VQSLQRQVEFLSMKLATVNP 437
+++LQ QV+ +SM + P
Sbjct: 272 MRTLQHQVQMMSMGNGLIRP 291
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 312 AKGGQSSGEAAKDNTENQR----KGDHKPSSTGNKSAGKQGKQGSQTSDP-PKEEYIHVR 366
AK G++S A+ N E+ R + + + S G + DP P + R
Sbjct: 206 AKSGKNSKSASVSNDEDDRSLSLQAQRNSCFSQSDSNAYLEPNGGASKDPAPPNLHRKSR 265
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A G AT+ SL R RRE+I+ER++ LQ+LVP +KV + ML+E + YV+ LQ Q++
Sbjct: 266 ATTGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQIK 324
Query: 427 FLS 429
LS
Sbjct: 325 LLS 327
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+RR +H+L E+ RR KI+ER K LQ +VPGCSK + +A LD+ I+Y++SLQ QV+
Sbjct: 175 SRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSK-SNQASTLDQTIHYMKSLQHQVQ 233
Query: 427 FLS 429
+S
Sbjct: 234 AMS 236
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 12/144 (8%)
Query: 297 SKKRKRNGQDIEFDQ--AKGGQSSGEAAKDNTENQRK-GDHKPSSTGNKSAGKQGKQ--- 350
S KR R+ +++ ++ K + + A NTE R G H S + S +
Sbjct: 167 SGKRSRSAMEVQKNKTNVKSRKKAKSAFTSNTEEDRNLGLHGQSLSSCCSEDDDSNELNG 226
Query: 351 -GSQTSDPPKEEYIHV----RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 405
GS + D I + R+ RG AT+ S+ R RREKI+ER+K LQ+LVP +KV
Sbjct: 227 GGSSSLDQKDSTTIKLKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV- 285
Query: 406 GKAVMLDEIINYVQSLQRQVEFLS 429
+ ML+E + YV+ LQ Q++ LS
Sbjct: 286 DISTMLEEAVQYVKFLQLQIKLLS 309
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA RG AT+ SL R RRE+I+ER++ LQ+LVP +KV + ML+E ++YV+ LQ Q
Sbjct: 265 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 323
Query: 425 VEFLS 429
++ LS
Sbjct: 324 IKLLS 328
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 372 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 431
A H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 84 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 142
Query: 432 --LATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYPPVHQS 478
+ P L IE A + + G + T S V PPV+QS
Sbjct: 143 NGVYLNPPYLSGAIEPAQASQMFAALGGGNITASSS---GAVMPPVNQS 188
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 65.9 bits (159), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/39 (74%), Positives = 35/39 (89%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+R + H+LAER RREKI+E+MK LQ L+P C+K T K LD+ I YV+SLQ Q++
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQ 309
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H L+ER RR+KI+E MK LQ+L+P C+K T ++ MLD++I YV+SLQ Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQ 331
Query: 427 FLSMKL 432
+++
Sbjct: 332 GKHLRI 337
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RAR+G A + S+A RVRRE+ISER+K LQ L+P KV ML++ I YVQ L+ Q+
Sbjct: 49 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAITYVQCLELQI 107
Query: 426 EFL 428
+ L
Sbjct: 108 KML 110
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AER RR +IS ++K LQDLVP K T A MLD + +++ LQ +
Sbjct: 279 VRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNE 338
Query: 425 VEFLSMKL 432
V+ L+ +L
Sbjct: 339 VQKLNKEL 346
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA RG AT+ SL R RRE+I+ER++ LQ+LVP +KV + ML+E ++YV+ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 345
Query: 425 VEFLS 429
++ LS
Sbjct: 346 IKLLS 350
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA RG AT+ SL R RRE+I+ER++ LQ+LVP +KV + ML+E ++YV+ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 345
Query: 425 VEFLS 429
++ LS
Sbjct: 346 IKLLS 350
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 10/88 (11%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA RG AT+ SL R RRE+I+ER+K LQ+LVP +KV + ML+E ++YV+ LQ Q+
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 275
Query: 426 EFLS---------MKLATVNPRLDFNIE 444
+ LS + +N LD NI+
Sbjct: 276 KLLSSDEMWMYAPIAYNGMNIGLDLNID 303
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Query: 317 SSGEAAKD-NTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNS 375
SSG D N +R+G + G+ S +G G P + ++R ++
Sbjct: 143 SSGAVDSDTNAPLKRRGLSSENDLGDFSCDSEG--GDLPEVPSSTDLPRNSSKRSRSAEV 200
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 431
H+++E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 201 HNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 255
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 348 GKQGSQTSDPPKEEYIHV----RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
G+ S +SD K V RA +G AT+ SL R RREKI+ER+K LQ+LVP +K
Sbjct: 146 GQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK 205
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLS 429
V + ML+E ++YV+ LQ Q++ LS
Sbjct: 206 V-DISTMLEEAVHYVKFLQLQIKLLS 230
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AER RR +IS ++K LQDLVP K T A MLD + +++ LQ +
Sbjct: 332 VRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNE 391
Query: 425 VEFLSMKL 432
V+ L+ +L
Sbjct: 392 VQKLNKEL 399
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%), Gaps = 6/76 (7%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+R + H+L ER RR+KI++RM+ L++L+P C+K T KA MLD+ I Y+++L+ Q++
Sbjct: 747 VKRSRNAQVHNLCERKRRDKINKRMRILKELIPNCNK-TDKASMLDDAIEYLKTLKLQIQ 805
Query: 427 -----FLSMKLATVNP 437
F S ++A V P
Sbjct: 806 VNFKSFSSYQIAFVRP 821
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T A MLD + +++ LQ Q
Sbjct: 208 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQTQ 267
Query: 425 VEFLSMKL 432
V+ L ++
Sbjct: 268 VQKLHKEM 275
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 348 GKQGSQTSDPPKEEYIHV----RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
G+ S +SD K V RA +G AT+ SL R RREKI+ER+K LQ+LVP +K
Sbjct: 146 GQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK 205
Query: 404 VTGKAVMLDEIINYVQSLQRQVEFLS 429
V + ML+E ++YV+ LQ Q++ LS
Sbjct: 206 V-DISTMLEEAVHYVKFLQLQIKLLS 230
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
Query: 358 PKEEYIHVRARRGQATNS--------HSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 409
P E+Y + R +N H +ER RR+KI++RMK LQ LVP SK T KA
Sbjct: 213 PDEDYKATKVDRSSGSNKRIKANSVVHKQSERRRRDKINQRMKELQKLVPNSSK-TDKAS 271
Query: 410 MLDEIINYVQSLQRQVEFLS-MKLAT 434
MLDE+I Y++ LQ QV+ ++ MK+ T
Sbjct: 272 MLDEVIQYMKQLQAQVQMMNWMKMYT 297
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 103/260 (39%), Gaps = 87/260 (33%)
Query: 232 GASNGSTLKNERKGESLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPS 291
G +NG+ L + KG S H D E + G+ T EP
Sbjct: 505 GVTNGAVLASSEKGASHCTQHL-----------DIQEPTITSSSGR------YATSAEPP 547
Query: 292 AKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQG 351
+ ++ KRK + + + + E +D + + ++ KP++TG S K
Sbjct: 548 KEPVTGTKRKSS-------EREEPECQSEDMEDESVDTKQ---KPATTGRVSTTK----- 592
Query: 352 SQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
R +A H+ +ER RR++I+E+M+ LQ+L+P +K T KA ML
Sbjct: 593 -----------------RSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASML 634
Query: 412 DEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLV 471
DE I Y++ LQ Q++ +S++ P P+V
Sbjct: 635 DEAIEYLKMLQLQLQMMSIRTGMTLP-------------------------------PMV 663
Query: 472 YPPVHQSQAGLMHGALPGMG 491
PP GL H +P MG
Sbjct: 664 MPP------GLQHMQMPQMG 677
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA RG AT+ S+ R RRE+I+ER++ LQ+LVP +KV + ML+E ++YV+ LQ Q
Sbjct: 207 TRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 265
Query: 425 VEFLS 429
++ LS
Sbjct: 266 IKLLS 270
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R ++ HSL+E+ RR++I+++M+ LQ+L+P C KV K +LDE I+Y+++LQ QV+
Sbjct: 10 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVD-KISILDEAIDYLKTLQLQVQ 68
Query: 427 FLSM 430
+SM
Sbjct: 69 VMSM 72
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T A ML+ + +++ LQ +
Sbjct: 263 IRAKRGCATHPRSIAERERRTRISGKLKTLQDLVPNMDKQTSYADMLELAVKHIKGLQNE 322
Query: 425 VEFLSMKL 432
VE L +L
Sbjct: 323 VEKLHKEL 330
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+ER RR++I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 74
Query: 427 FLS 429
LS
Sbjct: 75 VLS 77
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
S+ + PP+ ++R +A H+L+E+ RR KI+E++K LQ+L+P +K T KA M
Sbjct: 76 SSKAAPPPRSS-----SKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNK-TDKASM 129
Query: 411 LDEIINYVQSLQRQVEFLSMK 431
LDE I Y++ LQ QV+ L ++
Sbjct: 130 LDEAIEYLKQLQLQVQMLMVR 150
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKKLQLQVQ 210
Query: 427 FLSMK 431
LS +
Sbjct: 211 MLSAR 215
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+ER RR++I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 74
Query: 427 FLS 429
LS
Sbjct: 75 VLS 77
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 157 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 215
Query: 427 FLSMK 431
LS++
Sbjct: 216 MLSLR 220
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R ++ H+++E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 427 FLSMK 431
LSM+
Sbjct: 251 MLSMR 255
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 25/186 (13%)
Query: 247 SLVNSHGEAKQGVGASGGDSDEAEFSGGGGQDEPSAVEGTGGEPSAKGLSSKKRKRNGQD 306
S V++ G G+ A D + G +D+ ++ T S SS R R
Sbjct: 247 SRVSTSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRT--- 303
Query: 307 IEFDQAKGGQSSGEAAKD--NTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIH 364
Q+ GG + +D +E Q + S+ GNK+A + G
Sbjct: 304 --IGQSTGGNGNKRKGRDGEESECQSETAELESAEGNKTAPRSGS--------------- 346
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RR +A H+L+ER RRE+I+E+MK LQ+L+P C+K T KA MLDE I Y++SLQ Q
Sbjct: 347 --SRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQ 403
Query: 425 VEFLSM 430
++ + M
Sbjct: 404 LQVMWM 409
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 338 STGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 397
S +K G + K+ +++S V +R +A H+ +ER RR+KI++RMK LQ L
Sbjct: 269 SVCHKDEGDRKKENAKSS---------VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKL 319
Query: 398 VPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
VP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 320 VPNSNK-TDKASMLDEVIEYLKQLQAQVQ 347
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 338 STGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 397
S +K G + K+ +++S V +R +A H+ +ER RR+KI++RMK LQ L
Sbjct: 269 SVCHKDEGDRKKENAKSS---------VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKL 319
Query: 398 VPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
VP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 320 VPNSNK-TDKASMLDEVIEYLKQLQAQVQ 347
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Query: 299 KRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPP 358
KRK + ++ Q S EA+ D RK + S + Q + + P
Sbjct: 137 KRKASAINLCNAQKPSSVCSLEASNDLNFGVRKSHEDTDDSPYLSDNDEETQENIVKEKP 196
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
E V+ R + H+L+ER RR+KI+E+++ L++L+P C+K+ KA MLD+ I+Y+
Sbjct: 197 VRERNRVK-RSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNKM-DKASMLDDAIDYL 254
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYP 473
++L+ Q++ +SM A P F + ++ + +GF P + P
Sbjct: 255 KTLKLQLQIMSMGRALCMPLNHFMMLPAHHMNMNMNMNAQHLMMGFRPHVQFPIP 309
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R+ RG AT+ SL R RRE+I+ER+K LQ+LVP +KV + ML+E + YV+ LQ Q+
Sbjct: 225 RSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
Query: 426 EFLS 429
+ LS
Sbjct: 284 KLLS 287
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA+RG AT+ S+ R RRE+I+ER+K LQ LVP +KV ML+E I+YV+ LQ QV
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAKV-DIVTMLEEAIHYVKFLQLQV 270
Query: 426 EFLS 429
LS
Sbjct: 271 NMLS 274
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RARRG AT+ S+AERVRR KISE +K L DLVP K T A ML+ + Y++ L+ +
Sbjct: 557 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 616
Query: 425 VEFLSMKL 432
+E + +L
Sbjct: 617 IEQMKEEL 624
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
RR +A H+L+ER RR++I+ERMK LQ+L+P CSK T KA +LDE I+Y++SLQ Q++
Sbjct: 250 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQMQLQ 308
Query: 427 FLSM 430
+ M
Sbjct: 309 VMWM 312
>gi|302767438|ref|XP_002967139.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
gi|300165130|gb|EFJ31738.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
Length = 110
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RARRG AT+ S+AERVRR KISE +K L DLVP K T A ML+ + Y++ L+ +
Sbjct: 44 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 103
Query: 425 VE 426
+E
Sbjct: 104 IE 105
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 381 RVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
++RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 140 QLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 188
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AER RR +ISE+++ LQDLVP K T A MLD + +++ LQ +
Sbjct: 262 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTADMLDLAVEHIKGLQSE 321
Query: 425 VEFL 428
++ L
Sbjct: 322 LQAL 325
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA RG AT+ SL R RRE+I+ER++ LQ+LVP +KV + ML+E ++YV+ LQ Q+
Sbjct: 94 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 152
Query: 426 EFLS 429
+ LS
Sbjct: 153 KLLS 156
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA RG AT+ SL R RRE+I+ER++ LQ LVP +KV + ML+E + YV+ LQ Q+
Sbjct: 185 RASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKV-DISTMLEEAVQYVKFLQLQI 243
Query: 426 EFLS 429
+ LS
Sbjct: 244 KLLS 247
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RAR+G A + S+A R RRE+IS+R+K LQ+LVP +KV ML++ INYV+ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 426 EF 427
+
Sbjct: 418 KV 419
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS------ 429
H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L+
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 430 ---MKLATVNPRLDFNIEELLAKDV 451
M+L V P I E L +D+
Sbjct: 157 LNPMRLPQVPPPTHTRINETLEQDL 181
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA RG AT+ SL R RRE+I+ER++ LQ LVP +KV + ML+E + YV+ LQ Q+
Sbjct: 248 RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKV-DISTMLEEAVQYVKFLQLQI 306
Query: 426 EFLS 429
+ LS
Sbjct: 307 KLLS 310
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R +R + H+L+E+ RREKI+++M+ L+DL+P C+KV KA MLD+ I+Y+++L+ Q+
Sbjct: 331 RVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKV-DKASMLDDAIDYLKTLKLQL 389
Query: 426 E 426
+
Sbjct: 390 Q 390
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS------ 429
H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L+
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 430 ---MKLATVNPRLDFNIEELLAKDV 451
M+L V P I E L +D+
Sbjct: 157 LNPMRLPQVPPPTHTRINETLEQDL 181
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 372 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 431
A H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTMR 246
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS------ 429
H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L+
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 430 ---MKLATVNPRLDFNIEELLAKDV 451
M+L V P I E L +D+
Sbjct: 157 LNPMRLPQVPPPTHTRINETLEQDL 181
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+R +A H+L+ER RR++I+E+MK LQ+L+P +K + KA MLDE I+Y++SLQ QV+
Sbjct: 254 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNK-SDKASMLDEAIDYLKSLQLQVQ 312
Query: 427 FLSM 430
+ +
Sbjct: 313 RVQL 316
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA RG AT+ SL R RRE+I+ER++ LQ LVP +KV + ML+E + YV+ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQ 295
Query: 425 VEFLS 429
++ LS
Sbjct: 296 IKLLS 300
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA RG AT+ SL R RRE+I+ER++ LQ LVP +KV + ML+E + YV+ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQ 295
Query: 425 VEFLS 429
++ LS
Sbjct: 296 IKLLS 300
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA +G AT+ SL R RRE+I+ER++ LQ+LVP +KV + ML+E + YV+ LQ Q
Sbjct: 224 TRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQ 282
Query: 425 VEFLS 429
++ LS
Sbjct: 283 IKLLS 287
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
RR +A H+L+ER RR++I+ERMK LQ+L+P CSK T KA +LDE I+Y++SLQ Q++
Sbjct: 256 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQMQLQ 314
Query: 427 FLSM 430
+ M
Sbjct: 315 VMWM 318
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 265 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQTQ 324
Query: 425 VEFLSMKL 432
V+ L L
Sbjct: 325 VQKLHEDL 332
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA RG AT+ SL R RRE+I+ER++ LQ LVP +KV + ML+E + YV+ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-HISTMLEEAVQYVKFLQLQ 295
Query: 425 VEFLS 429
++ LS
Sbjct: 296 IKLLS 300
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA RG AT+ SL R RRE+I+ER++ LQ+LVP +KV + ML+E +NYV+ LQ Q
Sbjct: 274 TRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKV-DISTMLEEAVNYVKFLQTQ 332
Query: 425 VEFLSM 430
++ ++
Sbjct: 333 IKVCTI 338
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AER RR +ISE+++ LQ+LVP K T A MLD + +++ LQ Q
Sbjct: 141 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 200
Query: 425 VEFL 428
++ L
Sbjct: 201 LQAL 204
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA+RG AT+ S+AER RR +IS ++K LQ+LVP K T A MLD + +++ LQ Q
Sbjct: 231 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 290
Query: 425 VEFL 428
VE L
Sbjct: 291 VESL 294
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AER RR +ISE+++ LQDLVP K T + MLD + +++ LQ Q
Sbjct: 241 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKGLQSQ 300
Query: 425 VEFL 428
++ +
Sbjct: 301 LQAM 304
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 425 VEFL 428
++ L
Sbjct: 343 LQNL 346
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
V +R +A H+ +ER RR+KI++RMK LQ LVP SK + KA MLDE+I Y++ LQ Q
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-SDKASMLDEVIEYLKQLQAQ 322
Query: 425 VEFL 428
++ +
Sbjct: 323 LQMI 326
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+ERMK LQ+L+P CSK T KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 311
Query: 428 LSM 430
+ M
Sbjct: 312 MWM 314
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 425 VEFL 428
++ L
Sbjct: 343 LQNL 346
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
VRA+RG AT+ S+AER RR +ISE+++ LQ LVP K T + MLD +++++ LQ
Sbjct: 283 FRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQ 342
Query: 423 RQVEFL 428
Q++ L
Sbjct: 343 SQLQTL 348
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
+ RA RG AT+ SL R RRE+I+ER++ LQ LVP +KV + ML+E YV+ LQ
Sbjct: 189 YTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAAQYVKFLQL 247
Query: 424 QVEFLS 429
Q++ LS
Sbjct: 248 QIKLLS 253
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 19/126 (15%)
Query: 372 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 431
A H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 203
Query: 432 L-ATVNP------------RLDFNIEE-----LLAKDVLQSRAGPSSTLGFSPDMPLVYP 473
+++P R+DF EE L +L PS+ ++P+ L
Sbjct: 204 NGMSLHPMCLPGASQFSQIRMDFGGEENRPVHLNMSGILNMNQDPSTQNLYNPNQSLCTR 263
Query: 474 PVHQSQ 479
V SQ
Sbjct: 264 FVKCSQ 269
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Query: 299 KRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPP 358
KRK + ++ Q S EA+ D RK + S + Q + + P
Sbjct: 137 KRKASAINLCNAQKPSSVCSLEASNDLNFGVRKSHEDTDDSPYLSDNDEETQENIVKEKP 196
Query: 359 KEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 418
E V+ R + H+L+ER RR+KI+E+++ L++L+P C+K+ KA MLD+ I+Y+
Sbjct: 197 VREGNRVK-RSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNKM-DKASMLDDAIDYL 254
Query: 419 QSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFSPDMPLVYP 473
++L+ Q++ +SM A P F + ++ + +GF P + P
Sbjct: 255 KTLKLQLQIMSMGRALCMPLNHFMMLPAHHMNMNMNMNAQHLMMGFRPHVQFPIP 309
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 278 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 337
Query: 425 VEFL 428
++ L
Sbjct: 338 LQNL 341
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA+RG AT+ S+AER RR +IS ++K LQ+LVP K T A MLD + +++ LQ Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
Query: 425 VE 426
VE
Sbjct: 293 VE 294
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA RG AT+ SL R RRE+I+ER++ LQ+LVP +KV + ML+E + YV+ LQ Q+
Sbjct: 238 RAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 296
Query: 426 EFLS 429
+ LS
Sbjct: 297 KLLS 300
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 10/84 (11%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS------ 429
H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L+
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 155
Query: 430 ---MKLATVNPRLDFNIEELLAKD 450
M+L V P+ I E L +D
Sbjct: 156 LNPMQLPPVLPQTQTRINETLEQD 179
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA+RG AT+ S+AER RR +IS ++K LQ+LVP K T A MLD + +++ LQ Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
Query: 425 VE 426
VE
Sbjct: 293 VE 294
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA+RG AT+ S+AER RR +IS ++K LQ+LVP K T A MLD + +++ LQ Q
Sbjct: 231 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 290
Query: 425 VE 426
VE
Sbjct: 291 VE 292
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 431
H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 274 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 333
Query: 425 VEFL 428
++ L
Sbjct: 334 LQNL 337
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
RR +A H+L+ER RR++I+ERMK LQ+L+P CS+ T KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310
Query: 427 FLSM 430
+ M
Sbjct: 311 VMWM 314
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
RR +A H+L+ER RR++I+ERMK LQ+L+P CS+ T KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310
Query: 427 FLSM 430
+ M
Sbjct: 311 VMWM 314
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
H+ +ER RR++I+E++K LQ+L+P C+K T K MLDE I+Y++SLQ Q++ L M
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQMLVM 71
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
RR +A H+L+ER RR++I+ERMK LQ+L+P CS+ T KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310
Query: 427 FLSM 430
+ M
Sbjct: 311 VMWM 314
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T A MLD + +++ LQ +
Sbjct: 77 IRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDFAVQHIKGLQNE 136
Query: 425 VEFLSMKL 432
VE L ++
Sbjct: 137 VEKLHKEM 144
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 431
H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 128 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTMR 182
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA RG +T+ SL R RRE+I+ER+K LQ LVP +KV + ML+E ++YV+ LQ Q
Sbjct: 215 ARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTKV-DMSTMLEEAVHYVKFLQLQ 273
Query: 425 VEFLS 429
++ LS
Sbjct: 274 IKVLS 278
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R+R+G A + S+A R RRE+IS+R+K LQDLVP SKV ML++ INYV+ +Q Q+
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV-DLVTMLEKAINYVKFMQLQL 292
Query: 426 E 426
+
Sbjct: 293 Q 293
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R+R+G A + S+A R RRE+IS+R+K LQDLVP SKV ML++ INYV+ +Q Q+
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV-DLVTMLEKAINYVKFMQLQL 292
Query: 426 E 426
+
Sbjct: 293 Q 293
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 435
H+L+E+ RR +I+E+MK LQ LVP SK T KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 70 HNLSEKRRRCRINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKQLQLQVQMLSMRNGLY 128
Query: 436 NPRLDFNI 443
P+++ +
Sbjct: 129 LPQVNLPV 136
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 371 QATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
+A H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 234
Query: 431 K 431
+
Sbjct: 235 R 235
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 431
H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+ LS++
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSLR 170
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +IS ++K LQ+LVP K T + MLD + +++ LQ Q
Sbjct: 292 IRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQ 351
Query: 425 VEFL 428
++ L
Sbjct: 352 IQVL 355
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 431
H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 199
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AER RR +ISE+++ LQ LVP K T + MLD +++++ LQ Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 425 VEFL 428
++ L
Sbjct: 194 LQTL 197
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS------ 429
H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L+
Sbjct: 94 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 152
Query: 430 ---MKLATVNPRLDFNIEELLAKDV 451
M+L V P I E L +D+
Sbjct: 153 LNPMRLPPVLPPTHTRINETLEQDM 177
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+E+ RR +I+E+MK LQ+L+P SK T KA MLDE I Y++ LQ QV+
Sbjct: 134 SKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSK-TDKASMLDEAIEYLKLLQLQVQ 192
Query: 427 FLSMKLATV 435
LS++ +
Sbjct: 193 GLSVRFLEI 201
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
H+ +ER RR++I+E++K LQ+L+P C+K T K MLDE I+Y++SLQ Q++ L M
Sbjct: 22 HNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQIQLQMLVM 75
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 336 PSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ 395
P S+G+ ++ + +G+ S K RA RG AT+ SL R RRE+I+ER++ LQ
Sbjct: 170 PQSSGSCTSEEGNFEGNTYSSAKK---TCTRASRGGATDPQSLYARKRRERINERLRILQ 226
Query: 396 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
+LVP +KV + ML+E YV+ LQ Q++ LS
Sbjct: 227 NLVPNGTKV-DISTMLEEAAQYVKFLQLQIKLLS 259
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
R A +H+L E+ RR KI+ER + LQ LVPGC + +A LD+ I Y++SLQ Q+E
Sbjct: 192 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 251
Query: 428 LS 429
S
Sbjct: 252 TS 253
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 371 QATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
+A H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 431 K 431
+
Sbjct: 256 R 256
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R +RG AT+ S+ R RREKI+ER++ LQ L+P KV MLDE ++YVQ L+RQV
Sbjct: 448 RVQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGKV-DIVTMLDEAVHYVQFLKRQV 506
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
R A +H+L E+ RR KI+ER + LQ LVPGC + +A LD+ I Y++SLQ Q+E
Sbjct: 79 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 138
Query: 428 LS 429
S
Sbjct: 139 TS 140
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+++ ++T H+L+ER RR++I+ERM+ LQ+L+P C+K KA MLDE I Y++SLQ Q++
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKA-DKASMLDEAIEYLKSLQLQLQ 483
Query: 427 FLSM 430
+SM
Sbjct: 484 IMSM 487
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+ERMK LQ+L+P CSK T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 428 L 428
+
Sbjct: 313 M 313
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+ERMK LQ+L+P CSK T KA +LDE I+Y++SLQ Q++
Sbjct: 233 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 291
Query: 428 L 428
+
Sbjct: 292 M 292
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+ERMK LQ+L+P CSK T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 428 L 428
+
Sbjct: 313 M 313
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA RG AT SL R RRE+I+ER++ LQ+LVP +KV + ML+E YV+ LQ Q+
Sbjct: 195 RASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQI 253
Query: 426 EFLS 429
+ LS
Sbjct: 254 KLLS 257
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 427
RR +A H+L+ER RR++I+ERMK LQ+L+P CSK T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 428 L 428
+
Sbjct: 313 M 313
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 51/70 (72%), Gaps = 6/70 (8%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV------TGKAVMLDEIINYVQS 420
+++ ++T H+L+ER RR++I+ERM+ LQ+L+P C+KV KA MLDE I Y++S
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEAIEYLKS 484
Query: 421 LQRQVEFLSM 430
LQ Q++ +SM
Sbjct: 485 LQLQLQIMSM 494
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+ +R +A H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ LQ Q
Sbjct: 269 ISTKRSRAAAIHNESERKRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIDYLKQLQAQ 327
Query: 425 VEF 427
V+
Sbjct: 328 VQV 330
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 371 QATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
+A H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 431 K 431
+
Sbjct: 256 R 256
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 7/97 (7%)
Query: 333 DHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMK 392
+HK S T +S+G K+ Q + PK++ + + A + S+A + RRE+ISER+K
Sbjct: 155 NHKRSHTTGESSGSVCKK--QCTAAPKKQ----KPKSATAKDPQSIAAKNRRERISERLK 208
Query: 393 FLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 209 ILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKILA 244
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 62.0 bits (149), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AER RR +ISE+++ LQ+LVP K T A MLD + +++ LQ Q
Sbjct: 27 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 86
Query: 425 VEFL 428
++ L
Sbjct: 87 LQAL 90
>gi|414873438|tpg|DAA51995.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 146
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 9/77 (11%)
Query: 306 DIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYIHV 365
D+E ++K +SS TE + T ++SAGK + ++PPK++YIHV
Sbjct: 76 DLEAKRSKTNKSSNNKGSLRTEVE---------TDSRSAGKAVSKNIPAAEPPKQDYIHV 126
Query: 366 RARRGQATNSHSLAERV 382
RARRGQAT+SHSLAERV
Sbjct: 127 RARRGQATDSHSLAERV 143
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R +R +A H+L+E+ RR +I+E+MK LQ L+P SK T KA MLD+ I Y++ LQ QV
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 85
Query: 426 EFL 428
+ +
Sbjct: 86 QMI 88
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AER RR +ISE+++ LQ LVP K T A MLD +++++ LQ +
Sbjct: 146 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQSE 205
Query: 425 VEFL 428
++ L
Sbjct: 206 LQAL 209
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
VRA+RG AT+ S+AER RR +ISE+++ LQ LVP K T A MLD +++++ LQ +
Sbjct: 143 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQNE 202
Query: 425 VEFL 428
++ L
Sbjct: 203 LQAL 206
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
RA RG AT+ SL R RRE+I+ER+K LQ +VP +KV + ML+E ++YV+ LQ Q
Sbjct: 270 TRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTKV-DISTMLEEAVHYVKFLQLQ 328
Query: 425 VE 426
++
Sbjct: 329 IK 330
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 424
+RA+RG AT+ S+AER RR +IS ++K LQ+LVP K T + MLD + +++ LQ Q
Sbjct: 292 IRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQ 351
Query: 425 VEFLSMKL 432
++ L+ ++
Sbjct: 352 IQKLNKEV 359
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 348 GKQGSQTSDPPKEEYIHV----RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 403
G+ S +SD K V RA +G AT+ SL R RREKI+ER+K LQ+LVP +K
Sbjct: 146 GQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK 205
Query: 404 VTGKAVMLDEIINYVQSLQRQVE 426
V + ML+E ++YV+ LQ Q++
Sbjct: 206 V-DISTMLEEAVHYVKFLQLQIK 227
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
+RR +A H+ +ER RR++I+E+M+ LQ L+P +K T KA ML+E I Y++SLQ Q++
Sbjct: 356 SRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
Query: 427 FLSM 430
+ M
Sbjct: 415 VMWM 418
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 61.2 bits (147), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 370 GQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
G AT+ S+ R RREKI+ER+K LQ+LVP +KV MLDE I+YV+ LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAKVD-IVTMLDEAIHYVKFLQNQVELL 58
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 383 RREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 434
RR KI+ER+K LQ LVPGCSK + +A LD+ I+Y++SLQ QV+ +S+ LA+
Sbjct: 225 RRHKINERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQHQVQAMSVGLAS 275
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 336 PSSTGNKSAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ 395
PS + KQ ++GS+ P K + S A +VRRE+ISER+K LQ
Sbjct: 166 PSGEARAAGKKQCRKGSK---PNKAASASSPSPSPNKEQPQSAAAKVRRERISERLKVLQ 222
Query: 396 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
DLVP +KV ML++ INYV+ LQ QV+ L+
Sbjct: 223 DLVPNGTKVD-LVTMLEKAINYVKFLQLQVKVLA 255
>gi|414883946|tpg|DAA59960.1| TPA: hypothetical protein ZEAMMB73_491228 [Zea mays]
Length = 379
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 23/72 (31%)
Query: 384 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNI 443
R+KISERMK LQDLVP CSK FLS KLATVNP L F+I
Sbjct: 330 RKKISERMKLLQDLVPECSK-----------------------FLSTKLATVNPELGFDI 366
Query: 444 EELLAKDVLQSR 455
E++++K +L S+
Sbjct: 367 EQIISKQMLLSQ 378
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 346 KQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 405
K+ S+ +D +E ++ + HSL+ER RR+KI+++M+ LQ L+P KV
Sbjct: 355 KEMASPSENADEEEEIPKSTSTKKKRIPQVHSLSERKRRDKINKKMRALQALIPNSDKV- 413
Query: 406 GKAVMLDEIINYVQSLQRQVEFLSMK 431
KA MLD+ I Y+++LQ Q++ +SM+
Sbjct: 414 DKASMLDKAIEYLKTLQLQLQMMSMR 439
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
VRA+RG AT+ S+AERVRR +IS+R++ LQ+LVP K T A MLDE +
Sbjct: 192 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAV 242
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
+A R AT S SL R RRE+I+ER++ LQ+LVP +KV + ML+E + YV+ LQ Q+
Sbjct: 211 KADRRSATESQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVEYVKFLQLQI 269
Query: 426 EFLS 429
+ LS
Sbjct: 270 KLLS 273
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
H+ +ER RR+KI++RMK LQ LVP SK T KA MLDE+I Y++ LQ QV+
Sbjct: 287 HNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQ 336
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 370 GQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
G AT+ S+ R RREKI+ER+K LQ+LVP +KV MLDE I+YV+ LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAKVD-IVTMLDEAIHYVKFLQTQVELL 58
>gi|357147364|ref|XP_003574318.1| PREDICTED: transcription factor UNE10-like isoform 2 [Brachypodium
distachyon]
Length = 453
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
+PP + +R +A H+ +ER RR++I+++M+ LQ LVP SK T KA MLDE+I
Sbjct: 245 EPPMRMRSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSK-TDKASMLDEVI 303
Query: 416 NYVQSLQRQVE 426
+++ LQ QV+
Sbjct: 304 EHLKQLQAQVQ 314
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA+RG AT+ S+ R RRE+I+ER++ LQ LVP +KV ML+E INYV+ LQ Q+
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAKV-DIVTMLEEAINYVKFLQLQL 296
>gi|356567480|ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 397
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 18/117 (15%)
Query: 304 GQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQGKQGSQTSDPPKEEYI 363
G++ GQ + +E Q + S+ GNKS+ + G
Sbjct: 151 GKNCSLSTRNQGQKRKGIDVEESEEQSEDTELKSALGNKSSQRAG--------------- 195
Query: 364 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQS 420
ARR +A H+L+ER RR++I+E+MK LQ L+P SK T KA ML+E I Y++S
Sbjct: 196 --LARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSK-TDKASMLEEAIEYLKS 249
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+ +ER RR++I+E+M+ LQ L+P +K T KA ML+E I Y++SLQ Q++
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
Query: 427 FLSM 430
+ M
Sbjct: 415 VMWM 418
>gi|357147361|ref|XP_003574317.1| PREDICTED: transcription factor UNE10-like isoform 1 [Brachypodium
distachyon]
Length = 460
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 356 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 415
+PP + +R +A H+ +ER RR++I+++M+ LQ LVP SK T KA MLDE+I
Sbjct: 245 EPPMRMRSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSK-TDKASMLDEVI 303
Query: 416 NYVQSLQRQVE 426
+++ LQ QV+
Sbjct: 304 EHLKQLQAQVQ 314
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA+RG AT+ S+ R RREKI+ER+K LQ LVP +V ML+E I++V+ L+ Q+
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQV-DIVTMLEEAIHFVKFLEFQL 529
Query: 426 EFL 428
E L
Sbjct: 530 ELL 532
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 372 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A H+ +ER RR+KI++RMK LQ LVP SK T KA MLDE+I Y++ LQ QV+
Sbjct: 29 AAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQ 82
>gi|224058495|ref|XP_002299530.1| predicted protein [Populus trichocarpa]
gi|222846788|gb|EEE84335.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 375 SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
SH+L+ER +REK+++R L+ +VP SKV K +LDE I Y+Q L+R+VE L
Sbjct: 431 SHALSERKQREKLNKRFMILKSIVPSISKVVDKVSILDETIEYLQELERKVEEL 484
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 7/76 (9%)
Query: 353 QTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 412
++ PPK + + + + S+A R RRE+ISERM+ LQ LVPG +K+ A MLD
Sbjct: 151 ESVKPPKRRNVKI------SKDPQSVAARHRRERISERMRILQRLVPGGTKM-DTASMLD 203
Query: 413 EIINYVQSLQRQVEFL 428
E I+YV+ L++QV+ L
Sbjct: 204 EAIHYVKFLKKQVQSL 219
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 60.1 bits (144), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+ER RR++I+ERMK LQ+L+P +K T KA MLDE I Y++ LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
>gi|356526934|ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 266
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 289 EPSAKGLSSKKRKRNGQDIEFDQAKGGQSSGEAAKDNTENQRKGDHKPSSTGNKSAGKQG 348
EP+ S G+ GQ + +E Q + S+ GNKS+ + G
Sbjct: 3 EPAVTSSSGGSGSSLGKTCSLSTRNQGQKRKGIDVEESEEQSEDTELKSALGNKSSQRTG 62
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
ARR +A H+L+ER RR++I+E+MK LQ L+P SK T KA
Sbjct: 63 S-----------------ARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSK-TDKA 104
Query: 409 VMLDEIINYVQS 420
ML+E I Y++S
Sbjct: 105 SMLEEAIEYLKS 116
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA R T S+ R RRE+I+ER+K LQ+LVP +KV + ML+E ++YV+ LQ Q+
Sbjct: 227 RAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 285
Query: 426 EFLS 429
LS
Sbjct: 286 RLLS 289
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L++
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYMKQLQLQVQTLAV 150
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 59.7 bits (143), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R +R +A H+L+ER RR++I+E+M+ LQ+L+P +K T KA MLDE I Y++ LQ Q+
Sbjct: 12 RPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQL 70
Query: 426 EFLSMKL 432
+ ++L
Sbjct: 71 QVPKIEL 77
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 59.7 bits (143), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
++R +A H+L+ER RR++I+ERMK LQ+L+P +K T KA MLDE I Y++ LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 377 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
S+A R+RRE+ISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ L
Sbjct: 121 SIAARLRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 370 GQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
GQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ QV+ LS
Sbjct: 127 GQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLS 185
Query: 430 M 430
M
Sbjct: 186 M 186
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 365 VRAR-RGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 423
VR R R H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ
Sbjct: 97 VRTRQRSIDAKFHNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQL 155
Query: 424 QVEFLSM 430
QV+ L++
Sbjct: 156 QVQALAV 162
>gi|145712853|gb|ABP96466.1| phytochrome interacting factor 4 [Arabidopsis lyrata subsp.
petraea]
Length = 250
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSL 421
RR +A H+L+ER RR++I+ERMK LQ+L+P CSK T KA +LD I+Y++SL
Sbjct: 199 RRSRAAEVHNLSER-RRDRINERMKALQELIPHCSK-TDKASILDGAIDYMKSL 250
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 375 SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
+H ++ + RR++I+E++K LQ+L+P C+K T K MLDE I+Y++SLQ Q++ L M
Sbjct: 143 AHLVSRKRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQMLVM 197
>gi|449461981|ref|XP_004148720.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 98
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Query: 342 KSAGKQGKQGSQTS-DPPKEEYIHVRARRGQATNSHSLAERV 382
KS KQ K+ S S + PKE YIHVRARRGQATNSHS+AERV
Sbjct: 55 KSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV 96
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
S A +VRRE+ISER+K LQDLVP +KV ML++ INYV+ LQ QV+ L+
Sbjct: 209 QSAAAKVRRERISERLKVLQDLVPNGTKVD-LVTMLEKAINYVKFLQLQVKVLA 261
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 59.3 bits (142), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
ARR +H+L E+ RR KI +++K L+ LVPGC + +A +LD+ I +++SLQ+Q++
Sbjct: 19 ARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQTIQHIKSLQQQIQ 78
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
S A +VRRE+ISER+K LQDLVP +KV ML++ INYV+ LQ QV+ L+
Sbjct: 210 QSAAAKVRRERISERLKVLQDLVPNGTKVD-LVTMLEKAINYVKFLQLQVKVLA 262
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 383 RREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 430
RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y+++LQ QV+ +SM
Sbjct: 12 RRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQMMSM 58
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 58.9 bits (141), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 370 GQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
G AT+ S+ R RREKI+ER+K LQ LVP +KV MLDE I+YVQ LQ QV L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQHLVPNGAKVD-IVTMLDEAIHYVQFLQLQVTLL 58
>gi|339716186|gb|AEJ88332.1| putative MYC protein, partial [Tamarix hispida]
Length = 181
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 345 GKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREK 386
GK+ Q +++ P ++YIHVRARRGQAT+SHSLAER RREK
Sbjct: 140 GKETMQNTKSPPDPSKDYIHVRARRGQATDSHSLAERARREK 181
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 370 GQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
G A + S+A + RRE+ISER+K LQDLVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 232 GPAKDPQSIAAKNRRERISERLKMLQDLVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 290
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 58.9 bits (141), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 370 GQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
G AT+ S+ R RREKI+ER++ LQ L+P KV MLDE ++YVQ L+RQV L
Sbjct: 1 GSATDPQSVHARARREKIAERLRKLQHLIPNGGKVD-IVTMLDEAVHYVQFLKRQVTLL 58
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 357 PPKEEYIHVRARRGQATNS---HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 413
P EE + +R +R S S+A R RRE+IS+R++ LQ VPG +K+ A MLDE
Sbjct: 371 PSMEEIVQLRPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKM-DTASMLDE 429
Query: 414 IINYVQSLQRQVEFL 428
I+YV+ LQ+Q++ L
Sbjct: 430 AIHYVKFLQQQLQTL 444
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 377 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
S+A R RRE+ISE+++ LQ LVPG +K+ A MLDE I YV+ L+RQ+ FL
Sbjct: 130 SVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRFL 180
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 376 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
S A +VRRE+ISER+K LQDLVP +KV ML++ INYV+ LQ QV+ L+
Sbjct: 225 QSAAAKVRRERISERLKVLQDLVPNGTKVD-LVTMLEKAINYVKFLQLQVKVLA 277
>gi|357454361|ref|XP_003597461.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486509|gb|AES67712.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 411
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 8/60 (13%)
Query: 360 EEYIH--------VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 411
E+++H +RA+RG AT+ S+AERVRR KISERM+ LQDLVP K+ + +
Sbjct: 319 EKFLHFSDSVPMKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKICWTWLWI 378
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
A+R +A H+ +ER RR++I+E+M+ LQ+L+P +K T KA MLDE I Y++ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 77
Query: 427 FLSM 430
++
Sbjct: 78 VCAV 81
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 349 KQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
KQ + + PK ++ G A + S+A + RRE+ISER+K LQDLVP SKV
Sbjct: 220 KQCNNATKKPKP-----KSAAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSKV-DLV 273
Query: 409 VMLDEIINYVQSLQRQVEFLS 429
ML++ I+YV+ LQ QV+ L+
Sbjct: 274 TMLEKAISYVKFLQLQVKVLA 294
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 357 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 416
PPK + + + + S+A R RRE+ISER+K LQ LVPG +K+ A MLDE I+
Sbjct: 128 PPKRRNVKI------SKDPQSVAARHRRERISERIKILQRLVPGGTKM-DTASMLDEAIH 180
Query: 417 YVQSLQRQVEFL 428
YV+ L++QV+ L
Sbjct: 181 YVKFLKKQVQTL 192
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA A + SL R RRE+I+ER++ LQ+LVP +KV + ML+E + YV+ LQ Q+
Sbjct: 265 RATTSAAADPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 323
Query: 426 EFLS 429
+ LS
Sbjct: 324 KLLS 327
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 27/133 (20%)
Query: 351 GSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 410
G + ++ PK + + + +T+ ++A R RRE+I+E+++ LQ LVPG SK+ A M
Sbjct: 326 GLEVAEKPKRKNVKI------STDPQTVAARHRRERINEKIRVLQKLVPGGSKM-DTASM 378
Query: 411 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSST-LGFSPDMP 469
LDE NY++ L+ QV+ L E L V P+S F+P P
Sbjct: 379 LDEAANYLKFLRSQVKAL----------------ESLGNKVDAMNCPPTSIAFSFNPSFP 422
Query: 470 LVYPP---VHQSQ 479
+ PP +H S
Sbjct: 423 MQTPPLCHIHHSH 435
>gi|223950383|gb|ACN29275.1| unknown [Zea mays]
gi|414869404|tpg|DAA47961.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414869405|tpg|DAA47962.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 347
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 365 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 408
VRA+RG AT+ S+AERVRR KISER++ LQ+LVP KVT A
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKVTAPA 340
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 13/118 (11%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
RR +A H+L+ER RR++I+E+MK LQ+L+P +K + KA MLDE I Y++SLQ Q++
Sbjct: 334 TRRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNK-SDKASMLDEAIEYLKSLQLQLQ 392
Query: 427 FLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFS-PDMPLVYPPVHQSQAGLM 483
+ M V P + ++ +A R G +G P +P ++ P+H + L+
Sbjct: 393 LMWMG-GGVAPMMFPGVQHYMA------RMG----MGMCPPPLPSIHNPMHLPRVQLV 439
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
Query: 342 KSAGKQGKQGSQTSDPPKEEYIHVRAR-RGQATNS----HSLAERVRREKISERMKFLQD 396
KSAG + Q +++ P K+ V + + + T S SLA + RRE+ISER+K LQ+
Sbjct: 165 KSAGNKRSQTGESTQPSKKPNSGVTGKAKPKPTTSPKDPQSLAAKNRRERISERLKILQE 224
Query: 397 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 429
LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 225 LVPNGTKV-DLVTMLEKAISYVKFLQVQVKVLA 256
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 366 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
RA AT++ S+ R RRE+I+ER++ LQ LVP +KV + ML+E + YV+ LQ Q+
Sbjct: 197 RAASSPATDAQSIYARKRRERINERLRILQTLVPNGTKV-DISTMLEEAVQYVKFLQLQI 255
Query: 426 EFLS 429
+ LS
Sbjct: 256 KLLS 259
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 13/118 (11%)
Query: 367 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 426
RR +A H+L+ER RR++I+E+MK LQ+L+P +K + KA MLDE I Y++SLQ Q++
Sbjct: 334 TRRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNK-SDKASMLDEAIEYLKSLQLQLQ 392
Query: 427 FLSMKLATVNPRLDFNIEELLAKDVLQSRAGPSSTLGFS-PDMPLVYPPVHQSQAGLM 483
+ M V P + ++ +A R G +G P +P ++ P+H + L+
Sbjct: 393 LMWMG-GGVAPMMFPGVQHYMA------RMG----MGMCPPPLPSIHNPMHLPRVQLV 439
>gi|413932893|gb|AFW67444.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 387
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 363 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 422
+HV R+G + RR++I E+M+ LQ+L+P C+K T KA +LDE I Y++SLQ
Sbjct: 181 VHVHKRKGMCRDESDSRSERRRDRIKEKMRALQELIPHCNK-TDKASILDETIEYLKSLQ 239
Query: 423 RQVEFLSM 430
QV+ + M
Sbjct: 240 MQVQIMWM 247
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 377 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 428
S+A R RRE+ISE+++ LQ LVPG +K+ A MLDE I+YV+ L+RQ+ L
Sbjct: 137 SVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKRQIRLL 187
>gi|242084062|ref|XP_002442456.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
gi|241943149|gb|EES16294.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
Length = 219
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 368 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 425
R +HSL E+ RR KI E++K LQ LVPGC + +A LD+ I Y++SLQ+ +
Sbjct: 159 RSHHHAEAHSLTEKRRRLKIKEKLKTLQQLVPGCPNNSNQASTLDQTIRYIKSLQQHI 216
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.128 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,734,325,293
Number of Sequences: 23463169
Number of extensions: 395819752
Number of successful extensions: 1281697
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1407
Number of HSP's successfully gapped in prelim test: 7108
Number of HSP's that attempted gapping in prelim test: 1228116
Number of HSP's gapped (non-prelim): 41050
length of query: 523
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 376
effective length of database: 8,910,109,524
effective search space: 3350201181024
effective search space used: 3350201181024
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 79 (35.0 bits)