Your job contains 1 sequence.
>009909
MDCTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA
CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS
STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKEL
QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKG
ILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKY
GEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFL
CDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQ
IYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRI
PDCLFDKNLQFWQCMDCNQLYWEVMSAYLFIFLTPAYFSFWL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009909
(522 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2152871 - symbol:AT5G24340 species:3702 "Arabi... 1562 2.2e-160 1
UNIPROTKB|F1Q045 - symbol:EXD3 "Uncharacterized protein" ... 179 6.5e-18 3
UNIPROTKB|E1BWV5 - symbol:EXD3 "Uncharacterized protein" ... 173 7.7e-16 2
UNIPROTKB|Q8N9H8 - symbol:EXD3 "Probable exonuclease mut-... 163 1.1e-15 3
UNIPROTKB|F1RVW3 - symbol:EXD3 "Uncharacterized protein" ... 152 4.3e-15 3
ZFIN|ZDB-GENE-091204-349 - symbol:exd3 "exonuclease 3'-5'... 165 2.7e-14 3
WB|WBGene00003504 - symbol:mut-7 species:6239 "Caenorhabd... 151 1.5e-12 3
UNIPROTKB|P34607 - symbol:mut-7 "Probable exonuclease mut... 151 1.5e-12 3
UNIPROTKB|G3X7J6 - symbol:G3X7J6 "Uncharacterized protein... 163 2.2e-10 2
FB|FBgn0032924 - symbol:Nbr "Nibbler" species:7227 "Droso... 165 3.8e-09 2
WB|WBGene00014220 - symbol:ZK1098.3 species:6239 "Caenorh... 128 1.1e-06 2
WB|WBGene00013256 - symbol:Y57A10A.13 species:6239 "Caeno... 110 4.6e-05 2
>TAIR|locus:2152871 [details] [associations]
symbol:AT5G24340 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA;ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 EMBL:CP002688 EMBL:AB016884
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
InterPro:IPR002782 Pfam:PF01927 EMBL:BT006449 EMBL:AK227650
IPI:IPI00549160 RefSeq:NP_197822.1 UniGene:At.30964
ProteinModelPortal:Q9FIN8 SMR:Q9FIN8 EnsemblPlants:AT5G24340.1
GeneID:832504 KEGG:ath:AT5G24340 TAIR:At5g24340
HOGENOM:HOG000242294 InParanoid:Q9FIN8 KO:K09122 OMA:NLEFWQC
PhylomeDB:Q9FIN8 ProtClustDB:CLSN2686327 Genevestigator:Q9FIN8
Uniprot:Q9FIN8
Length = 505
Score = 1562 (554.9 bits), Expect = 2.2e-160, P = 2.2e-160
Identities = 308/495 (62%), Positives = 373/495 (75%)
Query: 9 LKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
LKI+LV+ST+S EFTHL + ++S+++ LDAEWKPQ S+ S+FP V+LLQ+AC R +
Sbjct: 5 LKIYLVSSTDSSEFTHLKWSFTRSTIIALDAEWKPQHSNTSSFPTVTLLQVAC----RLS 60
Query: 69 PESDESNASVVFXXXXXXXXXXXXWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
+D S+ VF WELL ++FVSPD+LKLGF+FKQDL+YLSSTF GC
Sbjct: 61 HATDVSD---VFLIDLSSIHLPSVWELLNDMFVSPDVLKLGFRFKQDLVYLSSTFTQHGC 117
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ GF V+ YLDITSIYN+L HK+ GRK PK+ KSLA ICKE+LDISLSKELQCSDWS R
Sbjct: 118 EGGFQEVKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYR 177
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIG 248
PLTEEQK YAA DAHCL++IF++F+ + + I+ D +++GL+ IL + D
Sbjct: 178 PLTEEQKLYAATDAHCLLQIFDVFEAHLVE------GITVQDLRVINVGLQEILTESDYS 231
Query: 249 NKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRE 308
+K V KLC+A D+IR+ S Q + GVV R + LNTMPMDE+L+KIVRK+GE+ILL+E
Sbjct: 232 SKIVTVKLCKATDVIRSMSENGQNIANGVVPRKTTLNTMPMDENLLKIVRKFGERILLKE 291
Query: 309 CDXXXXXXXXXXXXXXXVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGL 368
D + K+L DWQGPPPWD SLGGDG PKFL DVMVEGL
Sbjct: 292 SDLLPKKLKKKTRRRVASSTMNTNKQLVCSADWQGPPPWDSSLGGDGCPKFLLDVMVEGL 351
Query: 369 AKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLL 428
AKHLRCVGIDAA P SKKP+ REL+DQ KE RVLLTRD KLLRHQ L K+QIYRVKSLL
Sbjct: 352 AKHLRCVGIDAAIPHSKKPDSRELLDQAFKENRVLLTRDTKLLRHQDLAKHQIYRVKSLL 411
Query: 429 KNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKN 488
KN+QLLEVIE FQLKIS +QLMSRCTKCNG+FIQKPLS EEA+EAAKGFQRIP+CLF+KN
Sbjct: 412 KNEQLLEVIETFQLKISGNQLMSRCTKCNGKFIQKPLSIEEAIEAAKGFQRIPNCLFNKN 471
Query: 489 LQFWQCMDCNQLYWE 503
L+FWQCM+C+QLYWE
Sbjct: 472 LEFWQCMNCHQLYWE 486
>UNIPROTKB|F1Q045 [details] [associations]
symbol:EXD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
GeneTree:ENSGT00390000006843 InterPro:IPR002782 Pfam:PF01927
OMA:QENWADH EMBL:AAEX03006727 EMBL:AAEX03006728
Ensembl:ENSCAFT00000030921 Uniprot:F1Q045
Length = 850
Score = 179 (68.1 bits), Expect = 6.5e-18, Sum P(3) = 6.5e-18
Identities = 59/214 (27%), Positives = 96/214 (44%)
Query: 2 DCTYRKPLK---IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
D Y+ P+ IH + S E H A L +VG+D EW+P P+ S++Q
Sbjct: 339 DGYYQPPISREDIHFLASWEDLA-RHEAELLQPGQVVGVDLEWRPSFGTGGR-PQASIMQ 396
Query: 59 LACQPGPRFNPESDESNASVVFXXXXXXXXXXXXWELLKELFVSPDILKLGFKFKQDLIY 118
+A G F + + L+ +L P I KLG+ DL
Sbjct: 397 VAVG-GRVFLLDLP------LLSQPTGGQASQAFCRLVSQLLSDPSITKLGYGMAGDLRS 449
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ---LGRKLPKETKSLANICKELLDIS 175
L ++ C + ++ LD+ ++ + LGR + + L+ + +++L
Sbjct: 450 LGAS-CPTLAHVE-KQLRGGLDLLQVHRQMRIADMPALGRGEARGLRGLSLLVQQVLGRP 507
Query: 176 LSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L K Q S+W RPL+EEQ YAA DA+CL+E++
Sbjct: 508 LDKAQQLSNWDRRPLSEEQLVYAAADAYCLLEVY 541
Score = 116 (45.9 bits), Expect = 6.5e-18, Sum P(3) = 6.5e-18
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 341 WQGPPPW-DLSLGGDGYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSK 398
WQ P D++ G + +CD M++GLA+ LRC+G+D + R + +
Sbjct: 585 WQEPAAKEDMAPGVPARAFRVVCDNMLQGLARSLRCLGVDVLA-LGTDDDHRRAAEVARQ 643
Query: 399 EKRVLLTRDAKL--LRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKC 456
E R++LT LR Q + SL QQ V++ F + ++ + SRC C
Sbjct: 644 EGRIILTSGLPYHKLRAQVGAGRCLSVDCSLKARQQAKAVLKHFNVCVTHADIFSRCQAC 703
Query: 457 N-GRFIQ 462
N R+++
Sbjct: 704 NCDRYLK 710
Score = 48 (22.0 bits), Expect = 6.5e-18, Sum P(3) = 6.5e-18
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 479 RIPD-CLFDKNLQ-FWQCMDCNQLYWE 503
R+P+ L+ +L+ F+ C C +++WE
Sbjct: 789 RVPEGVLWRPDLRHFYCCSGCGKVFWE 815
Score = 42 (19.8 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 326 VIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSK 385
V + S ++ GD + P DL GD P + G HL C ++AA +S
Sbjct: 720 VRLGSPQEDAHSTGD-KADPSEDLQDAGDA-PD---EAPRGGYTSHLSCRWLEAADLQSH 774
Query: 386 KP 387
P
Sbjct: 775 AP 776
>UNIPROTKB|E1BWV5 [details] [associations]
symbol:EXD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
GeneTree:ENSGT00390000006843 InterPro:IPR002782 Pfam:PF01927
OMA:QENWADH EMBL:AADN02026991 EMBL:AADN02026982 EMBL:AADN02026983
EMBL:AADN02026965 EMBL:AADN02026966 EMBL:AADN02026967
EMBL:AADN02026968 EMBL:AADN02026969 EMBL:AADN02026970
EMBL:AADN02026971 EMBL:AADN02026972 EMBL:AADN02026973
EMBL:AADN02026974 EMBL:AADN02026975 EMBL:AADN02026976
EMBL:AADN02026977 EMBL:AADN02026978 EMBL:AADN02026979
EMBL:AADN02026980 EMBL:AADN02026981 EMBL:AADN02026984
EMBL:AADN02026985 EMBL:AADN02026986 EMBL:AADN02026987
EMBL:AADN02026988 EMBL:AADN02026989 EMBL:AADN02026990
EMBL:AADN02026992 EMBL:AADN02026993 EMBL:AADN02026994
EMBL:AADN02039946 IPI:IPI00573845 ProteinModelPortal:E1BWV5
Ensembl:ENSGALT00000014570 Uniprot:E1BWV5
Length = 725
Score = 173 (66.0 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 58/187 (31%), Positives = 85/187 (45%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFXXXXXX 86
+ L +VG+D EW+P PRVSLLQLA + E + +
Sbjct: 383 KVLKPGQIVGIDMEWRPSFGMVGK-PRVSLLQLAVRD------EVFLLDLPRLLEQAEVK 435
Query: 87 XXXXXXWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS--QGCDIGFDRVEPYLDITSI 144
++ L+ I KLG+ DL L++T CS +G D V L I +
Sbjct: 436 GEKEKLPHFIQRLYSDATITKLGYGMSGDLSSLAAT-CSTLKGMDKQSQSVVDLLTIDKL 494
Query: 145 YNHLHHKQLGRK--LPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
+ L +Q L + K L+ + + +L L K Q S+W RPL EEQ YAA DA
Sbjct: 495 VDVLSPEQSCEDGGLRQPEKGLSLLVQHVLGKPLDKTEQMSNWEKRPLREEQILYAASDA 554
Query: 203 HCLIEIF 209
+CL+E++
Sbjct: 555 YCLLEVY 561
Score = 106 (42.4 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 27/97 (27%), Positives = 55/97 (56%)
Query: 360 LCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDA--KLLRHQYLI 417
+CD M++GL ++LRC+G+D ++ + R+ + +E RV+LT + LR ++
Sbjct: 630 VCDNMLQGLGRYLRCLGVDVRMLENED-DHRKAAEIARQEGRVILTSGLPYQTLR-SHVG 687
Query: 418 KNQIYRVKSLLK-NQQLLEVIEAFQLKISEDQLMSRC 453
+ + + V K +Q L+V++ F + ++ + SRC
Sbjct: 688 EGRCFSVNCSEKAKEQALQVLKHFNVHVTLADIFSRC 724
>UNIPROTKB|Q8N9H8 [details] [associations]
symbol:EXD3 "Probable exonuclease mut-7 homolog"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0008408
EMBL:BX322799 UniGene:Hs.495553 GeneCards:GC09M140201
HGNC:HGNC:26023 ChiTaRS:EXD3 eggNOG:NOG241966 InterPro:IPR002782
Pfam:PF01927 EMBL:AB061798 EMBL:AK055004 EMBL:AK094438
EMBL:BC037355 EMBL:BC110879 IPI:IPI00413242 IPI:IPI00884892
IPI:IPI00884936 IPI:IPI00885207 RefSeq:NP_060290.3 HSSP:Q14191
ProteinModelPortal:Q8N9H8 SMR:Q8N9H8 STRING:Q8N9H8 DMDM:308153580
PeptideAtlas:Q2TAK4 PRIDE:Q8N9H8 Ensembl:ENST00000340951
Ensembl:ENST00000342129 Ensembl:ENST00000479452 GeneID:54932
KEGG:hsa:54932 UCSC:uc004cmp.2 UCSC:uc004cmr.3 UCSC:uc010ncf.1
CTD:54932 HPA:HPA047395 neXtProt:NX_Q8N9H8 PharmGKB:PA164719422
HOVERGEN:HBG108161 InParanoid:Q8N9H8 OMA:QENWADH OrthoDB:EOG4MPHPR
GenomeRNAi:54932 NextBio:58039 ArrayExpress:Q8N9H8 Bgee:Q8N9H8
Genevestigator:Q8N9H8 Uniprot:Q8N9H8
Length = 876
Score = 163 (62.4 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 61/214 (28%), Positives = 96/214 (44%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQS-SLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 361 DRYYQLPIPRENVHLLASWE--DLTRHEGALLQCHQVVGVDVEWTPVFVAGGR-PRPSLL 417
Query: 58 QLACQPGPRFNPESDESNASVVFXXXXXXXXXXXXWELLKELFVSPDILKLGFKFKQDLI 117
Q+A + G F + + L+ +L P I KLG+ DL
Sbjct: 418 QVAVE-GHVFLLDV------LALSQPPTGQGAQAFSRLVAQLLSDPSITKLGYGMVGDLQ 470
Query: 118 YLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKL---PKETKSLANICKELLDI 174
L T C + ++ +D+ ++ + + +E + L+ + +++L
Sbjct: 471 KLG-TSCPALAHVE-KQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLSLLVQQVLGT 528
Query: 175 SLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 529 ALDKTQQLSNWDRRPLCEEQVIYAAADAYCLLEV 562
Score = 121 (47.7 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQY 415
+ +CD M++GLA+ LRC+G+DA + + + R + +E R++LT LR Q
Sbjct: 631 RVVCDNMLQGLARSLRCLGVDARMLGNGE-DHRRAAEVARQEGRIILTSGQPFHKLRAQV 689
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
+ SL QQ V++ F ++++ + SRC CN
Sbjct: 690 GAGRCLSVDCSLKAQQQAKAVLKHFNVRVTHADIFSRCQACN 731
Score = 39 (18.8 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 4/13 (30%), Positives = 9/13 (69%)
Query: 491 FWQCMDCNQLYWE 503
F+ C C +++W+
Sbjct: 829 FYCCTGCGKVFWD 841
>UNIPROTKB|F1RVW3 [details] [associations]
symbol:EXD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GeneTree:ENSGT00390000006843
InterPro:IPR002782 Pfam:PF01927 OMA:QENWADH EMBL:CU928955
Ensembl:ENSSSCT00000006434 Uniprot:F1RVW3
Length = 863
Score = 152 (58.6 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 58/214 (27%), Positives = 91/214 (42%)
Query: 2 DCTYRKPLK---IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
DC Y+ P+ I + S E H A L +V +D EW+P P+ SL+Q
Sbjct: 360 DC-YQLPIAREDIRFLASWEDLA-RHEAELLQPGQVVSVDLEWRPSFGVGGR-PQASLMQ 416
Query: 59 LACQPGPRFNPESDESNASVVFXXXXXXXXXXXXWELLKELFVSPDILKLGFKFKQDLIY 118
+A + G F + + +L+ L P I KLG+ DL
Sbjct: 417 VAVE-GRVFLLDLPQ------LLSPARGQEPQAFSQLVSRLLADPSITKLGYGMAGDLRS 469
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANICKELLDIS 175
L ++ C ++ LD+ ++ L G + L+ + +++L
Sbjct: 470 LGAS-CPALAQAQ-KQLRGSLDLLQVHKQLRVVDAPAPGVDGAAGPRGLSLLVQQVLGKP 527
Query: 176 LSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L K Q S+W RPL EEQ YAA DA+CL+E++
Sbjct: 528 LDKTQQLSNWDRRPLGEEQLVYAAADAYCLLEVY 561
Score = 124 (48.7 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 31/102 (30%), Positives = 54/102 (52%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQ-YL 416
+ +CD M++GLA+ L C+G+D + + + R + +E R++LT + Q L
Sbjct: 618 RVVCDSMLQGLARRLLCLGVDVLVLGTGE-DHRRAAEVARQEGRIVLTSGLPYHKLQAQL 676
Query: 417 IKNQIYRVKSLLKNQQLLE-VIEAFQLKISEDQLMSRCTKCN 457
+ V LK QQ + VI F +++++D + SRC CN
Sbjct: 677 GAGRCLAVDCSLKAQQQAKAVIRHFNVRVTQDDIFSRCQACN 718
Score = 42 (19.8 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 491 FWQCMDCNQLYWE 503
F+ C C +++WE
Sbjct: 816 FYCCTGCGKVFWE 828
>ZFIN|ZDB-GENE-091204-349 [details] [associations]
symbol:exd3 "exonuclease 3'-5' domain containing 3"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
ZFIN:ZDB-GENE-091204-349 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GeneTree:ENSGT00390000006843
InterPro:IPR002782 Pfam:PF01927 EMBL:BX005370 IPI:IPI00491719
Ensembl:ENSDART00000092011 Uniprot:E7EY45
Length = 861
Score = 165 (63.1 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 66/221 (29%), Positives = 101/221 (45%)
Query: 5 YRKPL---KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLAC 61
Y+ PL +H V + E + A L S+VG+D EW+ S+ RV+L+QLA
Sbjct: 363 YQLPLPRENVHFVETLEEVDKCREA-VLKSGSVVGMDMEWRAGFGTVSS-QRVALIQLAV 420
Query: 62 QPGPRFNPESDESNASVVFXXXXXXXXXXXXWELLKELFVSPDILKLGFKFKQDLIYLSS 121
Q D+ ++ + ++ L ILKLG+ DL L S
Sbjct: 421 Q---------DQ--VFLLDLCAHAISHHSTTVDFIRALLSDKKILKLGYGMSGDLRSLVS 469
Query: 122 TFCSQGCDIGFD--RVEPYLDITSIYNHLHHKQLGRKL---------PKETKSLANICKE 170
T+ D+ + ++E LD+ I+ L LG K P E K L+ + ++
Sbjct: 470 TWP----DLREEPMKMEGVLDLLLIHQELQRCWLGNKGCRSVEVSEGPAE-KGLSLLVQQ 524
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
+L L+K Q S+W RPL Q YAA DA+CL++I+ I
Sbjct: 525 VLGKPLNKSEQLSNWERRPLRTSQLRYAAADAYCLLDIYLI 565
Score = 102 (41.0 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 33/120 (27%), Positives = 55/120 (45%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLT--RDAKLLRHQY 415
+ +CD M++GL + LRC+G+D + + + + E RV+LT + + LR Q
Sbjct: 638 RVVCDNMLQGLGRFLRCLGVDVKMLENTD-DHKVAAELARAEGRVILTAGQPYQSLRSQV 696
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
+ S Q + V++ F + ++ + SRC CN K LS EE K
Sbjct: 697 GEGRCLTLDCSEKARDQAVRVLQHFHVHLTPADIFSRCQACNCNEYFK-LSREEMTRMMK 755
Score = 42 (19.8 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWE 503
+ +P L + ++ C C +++WE
Sbjct: 819 ETVPPGLLPRIPVYFICTGCGKVFWE 844
>WB|WBGene00003504 [details] [associations]
symbol:mut-7 species:6239 "Caenorhabditis elegans"
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000335 "negative regulation of transposition,
DNA-mediated" evidence=IMP] [GO:0016458 "gene silencing"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005829 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0048471 GO:GO:0002119
GO:GO:0016246 GO:GO:0003676 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0008408 EMBL:Z22176 PIR:S40930 RefSeq:NP_499105.1
ProteinModelPortal:P34607 SMR:P34607 IntAct:P34607 STRING:P34607
PaxDb:P34607 EnsemblMetazoa:ZK1098.8 GeneID:176347
KEGG:cel:CELE_ZK1098.8 UCSC:ZK1098.8 CTD:176347 WormBase:ZK1098.8
eggNOG:NOG241966 GeneTree:ENSGT00390000006843 HOGENOM:HOG000019149
InParanoid:P34607 OMA:GFDMRND NextBio:892180 GO:GO:0000335
InterPro:IPR002782 Pfam:PF01927 Uniprot:P34607
Length = 910
Score = 151 (58.2 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 70/271 (25%), Positives = 124/271 (45%)
Query: 10 KIHLVTSTESPEFTHLA---RALSQSSL---VGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
+IH+V TES E +L ++LS VG D+EWKP + +++++QL
Sbjct: 403 QIHMV-KTES-EMNYLCSEIKSLSDEPAPVYVGFDSEWKPSNLTAVHDSKIAIIQLF--- 457
Query: 64 GPRFNPESDESNASVVFXXXXXXXXXXXXW--ELLKELFVSPDILKLGFKFKQDLIYLSS 121
F ++ +V W + LF + +GF + DL ++
Sbjct: 458 ---F-----KNCVWLVDCVELEKANMADDWWQKFASRLFGDSPVKVVGFDMRNDLDAMA- 508
Query: 122 TFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG-RKLPKETKSLANICKELLDISLSKEL 180
T + + + + D+ + ++ + +LPK+T LA++ LL + L K
Sbjct: 509 TIPALKSSMKIEDTKNAFDLKRLAENVCDIDMEILELPKKTFKLADLTHYLLGLELDKTE 568
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISEL-DSSNLDLGLK 239
QCS+W RPL ++Q YAA+DA ++E F + + ++ N + I ++ SN+
Sbjct: 569 QCSNWQCRPLRKKQIVYAALDAVVVVETFKKI-LSIVEEKNKDADIEKIVRESNV----- 622
Query: 240 GILEKPDIGNKTVRFKL-----CEALDIIRA 265
+ K D G+K+ R KL E DI+R+
Sbjct: 623 -MAPKKDKGHKSYR-KLKTIPWLELYDILRS 651
Score = 100 (40.3 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 32/109 (29%), Positives = 52/109 (47%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPREL--IDQTSKEK-RVLLTRDAK---LL 411
K + D M+ G K+LR VGID P+ + L I++ E R ++T +K L
Sbjct: 666 KVIVDTMLIGFGKNLRRVGIDVILPKDVSDFRKYLKEIERVGGEHLRHIITVPSKSYEAL 725
Query: 412 RHQY-LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGR 459
+ Y I + ++ QL+E + F + I + + RCT+CN R
Sbjct: 726 KMDYDNYTIAIPELNNMSPVDQLIEFFDLFNVDIRPEDVYPRCTECNSR 774
Score = 43 (20.2 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 479 RIPDCLFDK-NLQFWQCMDC 497
++PD F + NL F+ C +C
Sbjct: 871 KVPDDEFKRRNLSFYVCGEC 890
>UNIPROTKB|P34607 [details] [associations]
symbol:mut-7 "Probable exonuclease mut-7" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 GO:GO:0005829 GO:GO:0005634 GO:GO:0009792
GO:GO:0040007 GO:GO:0048471 GO:GO:0002119 GO:GO:0016246
GO:GO:0003676 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0008408
EMBL:Z22176 PIR:S40930 RefSeq:NP_499105.1 ProteinModelPortal:P34607
SMR:P34607 IntAct:P34607 STRING:P34607 PaxDb:P34607
EnsemblMetazoa:ZK1098.8 GeneID:176347 KEGG:cel:CELE_ZK1098.8
UCSC:ZK1098.8 CTD:176347 WormBase:ZK1098.8 eggNOG:NOG241966
GeneTree:ENSGT00390000006843 HOGENOM:HOG000019149 InParanoid:P34607
OMA:GFDMRND NextBio:892180 GO:GO:0000335 InterPro:IPR002782
Pfam:PF01927 Uniprot:P34607
Length = 910
Score = 151 (58.2 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 70/271 (25%), Positives = 124/271 (45%)
Query: 10 KIHLVTSTESPEFTHLA---RALSQSSL---VGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
+IH+V TES E +L ++LS VG D+EWKP + +++++QL
Sbjct: 403 QIHMV-KTES-EMNYLCSEIKSLSDEPAPVYVGFDSEWKPSNLTAVHDSKIAIIQLF--- 457
Query: 64 GPRFNPESDESNASVVFXXXXXXXXXXXXW--ELLKELFVSPDILKLGFKFKQDLIYLSS 121
F ++ +V W + LF + +GF + DL ++
Sbjct: 458 ---F-----KNCVWLVDCVELEKANMADDWWQKFASRLFGDSPVKVVGFDMRNDLDAMA- 508
Query: 122 TFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG-RKLPKETKSLANICKELLDISLSKEL 180
T + + + + D+ + ++ + +LPK+T LA++ LL + L K
Sbjct: 509 TIPALKSSMKIEDTKNAFDLKRLAENVCDIDMEILELPKKTFKLADLTHYLLGLELDKTE 568
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISEL-DSSNLDLGLK 239
QCS+W RPL ++Q YAA+DA ++E F + + ++ N + I ++ SN+
Sbjct: 569 QCSNWQCRPLRKKQIVYAALDAVVVVETFKKI-LSIVEEKNKDADIEKIVRESNV----- 622
Query: 240 GILEKPDIGNKTVRFKL-----CEALDIIRA 265
+ K D G+K+ R KL E DI+R+
Sbjct: 623 -MAPKKDKGHKSYR-KLKTIPWLELYDILRS 651
Score = 100 (40.3 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 32/109 (29%), Positives = 52/109 (47%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPREL--IDQTSKEK-RVLLTRDAK---LL 411
K + D M+ G K+LR VGID P+ + L I++ E R ++T +K L
Sbjct: 666 KVIVDTMLIGFGKNLRRVGIDVILPKDVSDFRKYLKEIERVGGEHLRHIITVPSKSYEAL 725
Query: 412 RHQY-LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGR 459
+ Y I + ++ QL+E + F + I + + RCT+CN R
Sbjct: 726 KMDYDNYTIAIPELNNMSPVDQLIEFFDLFNVDIRPEDVYPRCTECNSR 774
Score = 43 (20.2 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 479 RIPDCLFDK-NLQFWQCMDC 497
++PD F + NL F+ C +C
Sbjct: 871 KVPDDEFKRRNLSFYVCGEC 890
>UNIPROTKB|G3X7J6 [details] [associations]
symbol:G3X7J6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GeneTree:ENSGT00390000006843
OMA:QENWADH EMBL:DAAA02032393 EMBL:DAAA02032394
Ensembl:ENSBTAT00000032625 Uniprot:G3X7J6
Length = 724
Score = 163 (62.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 59/216 (27%), Positives = 99/216 (45%)
Query: 2 DCTYRKPLK---IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
DC Y+ P+ I+ + S E H L +VG+D EW+P PRVSL+Q
Sbjct: 358 DC-YQLPISRDDIYFLASWEELA-RHEDTLLQPGQVVGVDLEWRPSFGTGGR-PRVSLMQ 414
Query: 59 LACQPGPRFNPESDESNASVVFXXXXXXXXXXXXWELLKELFVSPDILKLGFKFKQDLIY 118
+A + G F + ++ +L+ +L P I KLG+ DL
Sbjct: 415 VAVE-GRVFLLDLPRLSSPA------GGQGPRAFSQLVSQLLSDPSITKLGYGMAGDLRS 467
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKET-----KSLANICKELLD 173
L +++ + G +++ LD+ ++ + + R P + L+ + +++L
Sbjct: 468 LGTSYPALA-QAG-QKLQGGLDLLQVHRQM--RVADRPAPAVDGAAGPRGLSLLVQQVLG 523
Query: 174 ISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L K Q S+W RPL E Q YAA DA+CL+E++
Sbjct: 524 KPLDKTQQLSNWDRRPLGEGQLVYAAADAYCLLEVY 559
Score = 64 (27.6 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 25/95 (26%), Positives = 41/95 (43%)
Query: 361 CDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQYLIK 418
C +GL+ L C G DA + ++ + I +E RV+LT LR Q
Sbjct: 630 CARSSQGLSSRLPCRGGDAKSIVARDAHA-QAIGVARQEGRVILTSGLPYHKLRAQVGAG 688
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRC 453
+ SL QQ ++ F ++++ + SRC
Sbjct: 689 RCLAVDCSLKAQQQAKAILRHFNVRVTPADIFSRC 723
>FB|FBgn0032924 [details] [associations]
symbol:Nbr "Nibbler" species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0044748
"3'-5'-exoribonuclease activity involved in mature miRNA 3'-end
processing" evidence=IMP] [GO:0044747 "mature miRNA 3'-end
processing" evidence=IMP] [GO:0030529 "ribonucleoprotein complex"
evidence=IDA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:AE014134 GO:GO:0003676 GO:GO:0030529
SUPFAM:SSF53098 GO:GO:0000175 GO:GO:0035196 eggNOG:NOG241966
GeneTree:ENSGT00390000006843 EMBL:AY118462 RefSeq:NP_610094.1
UniGene:Dm.30864 ProteinModelPortal:Q9VIF1 SMR:Q9VIF1 IntAct:Q9VIF1
MINT:MINT-282622 PaxDb:Q9VIF1 PRIDE:Q9VIF1
EnsemblMetazoa:FBtr0081499 GeneID:35385 KEGG:dme:Dmel_CG9247
UCSC:CG9247-RA FlyBase:FBgn0032924 InParanoid:Q9VIF1 OMA:AIDARCL
OrthoDB:EOG4X69QB PhylomeDB:Q9VIF1 GenomeRNAi:35385 NextBio:793268
Bgee:Q9VIF1 GO:GO:0043628 Uniprot:Q9VIF1
Length = 625
Score = 165 (63.1 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 44/131 (33%), Positives = 68/131 (51%)
Query: 93 WELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
W LL +F + +I K+GF DL L + Q + YLD+ +++ L +
Sbjct: 475 WRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQ---LRLQMPHHYLDLRNLWLELKKQ 531
Query: 152 QLGRKLP-----KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+ G +LP + +L ++ L L+K QCS+W+NRPL EQ YAAIDA CL+
Sbjct: 532 RFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSNWANRPLRREQILYAAIDARCLM 591
Query: 207 EIFNIFQVKVA 217
I+N +V+
Sbjct: 592 LIYNTLIERVS 602
Score = 48 (22.0 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEW 41
L+ ++ EF + L Q ++ LD+EW
Sbjct: 410 LIIVNKADEFDRMLYHLQQECVIYLDSEW 438
>WB|WBGene00014220 [details] [associations]
symbol:ZK1098.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0008408
EMBL:Z22176 eggNOG:NOG241966 GeneTree:ENSGT00390000006843
PIR:C88558 PIR:S40926 RefSeq:NP_499104.1 UniGene:Cel.9500
ProteinModelPortal:P34603 SMR:P34603 PaxDb:P34603
EnsemblMetazoa:ZK1098.3 GeneID:176346 KEGG:cel:CELE_ZK1098.3
UCSC:ZK1098.3 CTD:176346 WormBase:ZK1098.3 HOGENOM:HOG000019150
InParanoid:P34603 OMA:PLILCDK NextBio:892176 Uniprot:P34603
Length = 784
Score = 128 (50.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 52/220 (23%), Positives = 95/220 (43%)
Query: 6 RKPLKIHLVTSTESPEF--THLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
+K I +V + + E + L L + +G D+E+KP + R++++QL
Sbjct: 417 QKKYPIRIVQNEQDLEILLSELGE-LEEGMYIGYDSEFKPYHLIDVSTSRLAIIQLF--- 472
Query: 64 GPRFNPESDESNASVVFXXXXXXXXXXXXW-ELLKELFVSPDILKLGFKFKQDLIYLSST 122
F ++ N + W L K LF S +GF +QD I T
Sbjct: 473 ---FKDKAWLINCVAI----DNLASRDDVWIRLYKGLFESNKFSIVGFDIRQD-IEAMFT 524
Query: 123 FCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG-RKLPKETKSLANICKELLDISLSKELQ 181
S + + ++ + + S+ +++ + L +T L+ + L+ + + K Q
Sbjct: 525 VPSINKNFKIENIQNVICVKSLAENVNALSMDILNLSTKTSKLSVLADHLVGLKMDKSEQ 584
Query: 182 CSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ--VKVAQK 219
C +W RPL Q YA +DA + +F +FQ V+V +K
Sbjct: 585 CGNWQCRPLRRNQIIYAVMDA---VAVFEVFQKIVEVVRK 621
Score = 66 (28.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSK----EKRVLLT 405
K + D MV GL K+LR +G D PR E +E + + K E+R++++
Sbjct: 679 KIVVDTMVLGLGKNLRLLGFDVYIPRDVT-ELKEFLRKMDKMEESEQRLVIS 729
>WB|WBGene00013256 [details] [associations]
symbol:Y57A10A.13 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 EMBL:AL117195
GeneTree:ENSGT00390000006843 PIR:T31632 PIR:T31633
RefSeq:NP_496590.1 ProteinModelPortal:Q9NA69 STRING:Q9NA69
PaxDb:Q9NA69 EnsemblMetazoa:Y57A10A.13 GeneID:174858
KEGG:cel:CELE_Y57A10A.13 UCSC:Y57A10A.13 CTD:174858
WormBase:Y57A10A.13 eggNOG:NOG281262 HOGENOM:HOG000021974
InParanoid:Q9NA69 OMA:MILAYQL NextBio:885800 Uniprot:Q9NA69
Length = 710
Score = 110 (43.8 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 162 KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
K L+ IC++LL L K QCS W RPL Q YAA+DA+C++ ++
Sbjct: 627 KGLSFICEKLLGRPLDKTEQCSVWDRRPLRCLQLRYAAMDAYCMLLLY 674
Score = 68 (29.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTF 123
+L LF +P+I+K+GF+F +DL L + F
Sbjct: 504 VLSYLFETPEIVKIGFQFGEDLHQLRAAF 532
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 522 495 0.00083 119 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 622 (66 KB)
Total size of DFA: 319 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.26u 0.12s 40.38t Elapsed: 00:00:02
Total cpu time: 40.26u 0.12s 40.38t Elapsed: 00:00:02
Start: Sat May 11 12:34:35 2013 End: Sat May 11 12:34:37 2013